BASE PREFIX : PREFIX ncit: PREFIX skos: PREFIX cito: PREFIX dcat: PREFIX dctypes: PREFIX dct: PREFIX foaf: PREFIX freq: PREFIX idot: PREFIX lexvo: PREFIX pav: PREFIX prov: PREFIX rdf: PREFIX rdfs: PREFIX schemaorg: PREFIX sd: PREFIX sio: PREFIX xsd: PREFIX void: PREFIX void-ext: ###Summary Level (Complete) :chembl rdf:type dctypes:Dataset; dct:title "ChEMBL"@en ; dct:alternative "ChEMBLdb"@en ; dct:description "ChEMBL is a database of bioactive compounds, their quantitative properties and bioactivities (binding constants, pharmacology and ADMET, etc). The data is abstracted and curated from the primary scientific literature."@en ; dct:publisher :ebi ; foaf:page ; schemaorg:logo ; dct:license ; dct:rights """The data in ChEMBL is covered by the Creative Commons By Attribution. Under the -BY clause, we request attribution for subsequent use of ChEMBL. For publications using ChEMBL data, the primary current citation is: A. Gaulton, L. Bellis, J. Chambers, M. Davies, A. Hersey, Y. Light, S. McGlinchey, R. Akhtar, A.P. Bento, B. Al-Lazikani, D. Michalovich, & J.P. Overington (2012) 'ChEMBL: A Large-scale Bioactivity Database For Chemical Biology and Drug Discovery' Nucl. Acids Res. Database Issue. 40 D1100-1107 DOI:10.1093/nar/gkr777 PMID:21948594 If ChEMBL is incorporated into other works, we ask that the ChEMBL IDs are preserved, and that the release number of ChEMBL is clearly displayed."""@en ; dcat:theme ncit:C48807 ; #chemical dcat:keyword "assay"^^xsd:string, "chemical"^^xsd:string ; dct:references ; rdfs:seeAlso ; cito:citesAsAuthority ; dct:hasPart :chembl17_rdf_molecule_dataset, :chembl17_rdf_target_dataset ; #Identifiers idot:preferredPrefix "chembl" ; idot:alternatePrefix "chembldb" ; #Provenance and Change pav:hasCurrentVersion :chembl17 ; dct:accrualPeriodicity freq:quarterly; #Availability/Distributions dcat:accessURL ; void:sparqlEndpoint ; . :ebi foaf:page ; . ###Version Level (Complete) :chembl17 rdf:type dctypes:Dataset; dct:title "ChEMBL Version 17"@en ; dct:alternative "ChEMBLdb17"@en ; dct:description "ChEMBL17 is a database of bioactive compounds, their quantitative properties and bioactivities (binding constants, pharmacology and ADMET, etc). The data is abstracted and curated from the primary scientific literature."@en ; dct:created "2013-08"^^xsd:gYearMonth; pav:createdOn "2013-08"^^xsd:gYearMonth; pav:authoredOn "2013-07"^^xsd:gYearMonth; pav:curatedOn "2013-07"^^xsd:gYearMonth; dct:creator :ebi ; dct:contributor :annaGaulton ; pav:createdBy ; pav:authoredBy :annaGaulton ; pav:curatedBy :annaGaulton ; dct:issued "2013-08-29"^^xsd:date ; dct:publisher :ebi ; foaf:page ; schemaorg:logo ; dct:license ; dct:rights """The data in ChEMBL is covered by the Creative Commons By Attribution. Under the -BY clause, we request attribution for subsequent use of ChEMBL. For publications using ChEMBL data, the primary current citation is: A. Gaulton, L. Bellis, J. Chambers, M. Davies, A. Hersey, Y. Light, S. McGlinchey, R. Akhtar, A.P. Bento, B. Al-Lazikani, D. Michalovich, & J.P. Overington (2012) 'ChEMBL: A Large-scale Bioactivity Database For Chemical Biology and Drug Discovery' Nucl. Acids Res. Database Issue. 40 D1100-1107 DOI:10.1093/nar/gkr777 PMID:21948594 If ChEMBL is incorporated into other works, we ask that the ChEMBL IDs are preserved, and that the release number of ChEMBL is clearly displayed."""@en ; dct:language ; dcat:theme ncit:C48807 ; dcat:keyword "assay"^^xsd:string, "chemical"^^xsd:string ; dct:conformsTo ; dct:references ; rdfs:seeAlso ; cito:citesAsAuthority ; dct:hasPart :chembl17_rdf_molecule_dataset, :chembl17_rdf_target_dataset ; #Identifiers idot:preferredPrefix "chembl" ; idot:alternatePrefix "chembldb" ; #Provenance and Change pav:version "17"^^xsd:string, "17.0" ; dct:isVersionOf :chembl ; pav:previousVersion :chembl16 ; dct:source :pubchem-bioassay-09-01-2014 ; pav:retrievedFrom :pubchem-bioassay-09-01-2014 ; prov:wasDerivedFrom :pubchem-bioassay-09-01-2014 ; #Availability/Distributions dcat:distribution :chembl17db, :chembl17rdf ; dcat:accessURL ; dcat:landingPage ; . :annaGaulton foaf:name "Anna Gaulton" . ###Distribution (non-RDF) description (Complete) :chembl17db a dctypes:Dataset, dcat:Distribution ; dct:title "ChEMBL Version 17 Database Distribution"@en ; dct:alternative "ChEMBLdb17db"@en ; dct:description "ChEMBL17 database distribution is a database of bioactive compounds, their quantitative properties and bioactivities (binding constants, pharmacology and ADMET, etc). The data is abstracted and curated from the primary scientific literature."@en ; dct:created "2013-08"^^xsd:gYearMonth; pav:createdOn "2013-08"^^xsd:gYearMonth; pav:authoredOn "2013-07"^^xsd:gYearMonth; pav:curatedOn "2013-07"^^xsd:gYearMonth; dct:creator :ebi ; dct:contributor :annaGaulton ; pav:createdBy ; pav:authoredBy :annaGaulton ; pav:curatedBy :annaGaulton ; dct:issued "2013-08-29"^^xsd:date ; dct:publisher :ebi ; foaf:page ; schemaorg:logo ; dct:license ; dct:rights """The data in ChEMBL is covered by the Creative Commons By Attribution. Under the -BY clause, we request attribution for subsequent use of ChEMBL. For publications using ChEMBL data, the primary current citation is: A. Gaulton, L. Bellis, J. Chambers, M. Davies, A. Hersey, Y. Light, S. McGlinchey, R. Akhtar, A.P. Bento, B. Al-Lazikani, D. Michalovich, & J.P. Overington (2012) 'ChEMBL: A Large-scale Bioactivity Database For Chemical Biology and Drug Discovery' Nucl. Acids Res. Database Issue. 40 D1100-1107 DOI:10.1093/nar/gkr777 PMID:21948594 If ChEMBL is incorporated into other works, we ask that the ChEMBL IDs are preserved, and that the release number of ChEMBL is clearly displayed."""@en ; dct:language ; dcat:theme ncit:C48807 ; dcat:keyword "assay"^^xsd:string, "chemical"^^xsd:string ; ##Vocabulary does not make sense for a non-RDF dataset dct:conformsTo ; dct:references ; rdfs:seeAlso ; cito:citesAsAuthority ; #Identifiers idot:preferredPrefix "chembl" ; idot:alternatePrefix "chembldb" ; idot:identifierPattern "CHEMBL\\d+"^^xsd:string ; ###void:uriRegexPattern does not make sense for a non-RDF resource idot:accessPattern "http://bio2rdf.org/chembl", "http://identifiers.org/chembl.compound/", "http://linkedchemistry.info/chembl/chemblid", "http://www.ebi.ac.uk/chembl/compound/inspect/" ; idot:exampleIdentifier "CHEMBL25"^^xsd:string ; ###void:exampleResource does not make sense for a non-RDF resource #Provenance and Change ###sio:has-data-item-in not used for non-RDF resources pav:version "17"^^xsd:string, "17.0" ; pav:previousVersion :chembl16db ; dct:source :pubchem-bioassay-09-01-2014 ; pav:retrievedFrom ; prov:wasDerivedFrom ; pav:createdWith ; #Availability/Distributions dct:format "application/sql" ; dcat:accessURL ; dcat:landingPage ; dcat:downloadURL ; dcat:byteSize "861443887"^^xsd:decimal ; ###void:dataDump does not make sense for a non-RDF resource #Statistics ### Current definitions do not make sense for a non-RDF resource . ###RDF Distribution description (Complete) :chembl17rdf a dctypes:Dataset, dcat:Distribution, void:Dataset ; dct:title "ChEMBL Version 17 RDF Distribution"@en ; dct:alternative "ChEMBLdb17rdf"@en ; dct:description "ChEMBL17 RDF distribution is a database of bioactive compounds, their quantitative properties and bioactivities (binding constants, pharmacology and ADMET, etc). The data is abstracted and curated from the primary scientific literature."@en ; dct:created "2013-08"^^xsd:gYearMonth; pav:createdOn "2013-08"^^xsd:gYearMonth; pav:authoredOn "2013-07"^^xsd:gYearMonth; pav:curatedOn "2013-07"^^xsd:gYearMonth; dct:creator :ebi ; dct:contributor :annaGaulton ; pav:createdBy ; pav:authoredBy :annaGaulton ; pav:curatedBy :annaGaulton ; dct:issued "2013-08-29"^^xsd:date ; dct:publisher :ebi ; foaf:page ; schemaorg:logo ; dct:license ; dct:rights """The data in ChEMBL is covered by the Creative Commons By Attribution. Under the -BY clause, we request attribution for subsequent use of ChEMBL. For publications using ChEMBL data, the primary current citation is: A. Gaulton, L. Bellis, J. Chambers, M. Davies, A. Hersey, Y. Light, S. McGlinchey, R. Akhtar, A.P. Bento, B. Al-Lazikani, D. Michalovich, & J.P. Overington (2012) 'ChEMBL: A Large-scale Bioactivity Database For Chemical Biology and Drug Discovery' Nucl. Acids Res. Database Issue. 40 D1100-1107 DOI:10.1093/nar/gkr777 PMID:21948594 If ChEMBL is incorporated into other works, we ask that the ChEMBL IDs are preserved, and that the release number of ChEMBL is clearly displayed."""@en ; dct:language ; dcat:theme ncit:C48807 ; dcat:keyword "assay"^^xsd:string, "chemical"^^xsd:string ; void:vocabulary , , ; dct:conformsTo ; dct:references ; rdfs:seeAlso ; cito:citesAsAuthority ; void:subset :chembl17_rdf_molecule_dataset, :chembl17_rdf_target_dataset ; #Identifiers idot:preferredPrefix "chembl" ; idot:alternatePrefix "chembldb" ; idot:identifierPattern "CHEMBL\\d+"^^xsd:string ; void:uriRegexPattern "http://rdf.ebi.ac.uk/resource/chembl/target/CHEMBL\\d+" ; idot:accessPattern "http://bio2rdf.org/chembl", "http://identifiers.org/chembl.compound/", "http://linkedchemistry.info/chembl/chemblid", "http://www.ebi.ac.uk/chembl/compound/inspect/" ; idot:exampleIdentifier "CHEMBL25"^^xsd:string ; void:exampleResource ; #Provenance and Change #Only one data item given for the purpose of the example, all resources should be listed sio:has-data-item ; pav:version "17"^^xsd:string, "17.0" ; pav:previousVersion :chembl16rdf ; dct:source :pubchem-bioassay-09-01-2014 ; pav:retrievedFrom :pubchem-bioassay-09-01-2014 ; prov:wasDerivedFrom :pubchem-bioassay-09-01-2014 ; pav:createdWith :chembl-sql2rdf-exporter-v1 ; #Availability/Distributions dct:format , "application/gzip", "text/turtle" ; dcat:accessURL ; dcat:landingPage ; dcat:downloadURL ; void:dataDump ; void:subset :chembl17-uniprot-exactMatch-linkset ; #Statistics: Note that numbers are taken from Bio2RDF release 3 void:triples "409942525"^^xsd:integer ; void:entities "50061452"^^xsd:integer ; void:distinctSubjects "50062405"^^xsd:integer ; void:properties "141"^^xsd:integer ; void:distinctObjects "50128234"^^xsd:integer ; #Number of unique classes void:classPartition [ void:class rdfs:Class ; void:distinctSubjects "110"^^xsd:integer ] ; #Number of unique literals void:classPartition [ void:class rdfs:Literal ; void:distinctSubjects "58067345"^^xsd:integer ] ; #Number of graphs void:classPartition [ void:class sd:Graph ; void:distinctSubjects "8"^^xsd:integer ] ; #Enhanced Statistics #Class and number of instances void:classPartition [ void:class ; void:distinctSubjects "12419715"^^xsd:integer ] ; # Property and number of triples void:propertyPartition [ void:property ; void:triples "37259145"^^xsd:integer ] ; # Property, triples, and number of unique subjects of a certain type void:propertyPartition [ void:property ; void:triples "12419715"^^xsd:integer ; void:classPartition [ void:class ; void:distinctSubjects "12419715"^^xsd:integer ; ]] ; # Property, triples, and number of unique objects of a certain type void:propertyPartition [ void:property ; void:triples "37259145"^^xsd:integer ; void-ext:objectClassPartition [ void:class ; void:distinctObjects "12419715"^^xsd:integer ]] ; # Property, triples, and number of unique literals void:propertyPartition [ void:property ; void:triples "1360455"^^xsd:integer ; void-ext:objectClassPartition [ void:class rdfs:Literal; void:distinctObjects "1359785"^^xsd:integer ]] ; # Property, triples, and number of unique subjects and objects of a certain type void:propertyPartition [ void:property ; void:triples "12419715"^^xsd:integer ; void:classPartition [ void:class ; void:distinctSubjects "12419715"^^xsd:integer ; ]; void-ext:objectClassPartition [ void:class ; void:distinctObjects "1042288"^^xsd:integer ; ]] ; . idot:primarySource true ; dct:format "text/html" ; dct:publisher ; idot:accessIdentifierPattern "^http://www.ebi.ac.uk/chembl/compound/inspect/CHEMBL\\d+" ; a idot:AccessPattern . dct:format "text/html" ; idot:accessIdentifierPattern "^http://identifiers.org/chembl.compound/CHEMBL\\d+" ; a idot:AccessPattern . dct:format "application/rdf+xml" ; dct:publisher ; idot:accessIdentifierPattern "^http://bio2rdf.org/chembl:CHEMBL\\d+" ; a idot:AccessPattern . dct:format "application/rdf+xml" ; idot:accessIdentifierPattern "^http://linkedchemistry.info/chembl/CHEMBL\\d+" ; a idot:AccessPattern . :chembl17-uniprot-exactMatch-linkset ###Linkset specific metadata a void:Linkset ; void:subjectsTarget :chembl-rdf ; void:objectsTarget ; void:linkPredicate skos:exactMatch ; void:triples "6367"^^xsd:integer ; ##Metadata for a RDF distribution a dctypes:Dataset, dcat:Distribution, void:Dataset ; dct:title "ChEMBL Target Component to UniProt Protein Exact Match Linkset"@en ; dct:alternative "ChEMBLTargetCmpt2UniProtEMLS"@en ; dct:description "A linkset connecting ChEMBL target components with their corresponding UniProt protein entry where the match is deemed to be exact."@en ; dct:created "2013-08"^^xsd:gYearMonth; pav:createdOn "2013-08"^^xsd:gYearMonth; pav:authoredOn "2013-07"^^xsd:gYearMonth; pav:curatedOn "2013-07"^^xsd:gYearMonth; dct:creator :ebi ; dct:contributor :annaGaulton ; pav:createdBy ; pav:authoredBy :annaGaulton ; pav:curatedBy :annaGaulton ; dct:issued "2013-08-29"^^xsd:date ; dct:publisher :ebi ; foaf:page ; schemaorg:logo ; dct:license ; dct:rights """The data in ChEMBL is covered by the Creative Commons By Attribution. Under the -BY clause, we request attribution for subsequent use of ChEMBL. For publications using ChEMBL data, the primary current citation is: A. Gaulton, L. Bellis, J. Chambers, M. Davies, A. Hersey, Y. Light, S. McGlinchey, R. Akhtar, A.P. Bento, B. Al-Lazikani, D. Michalovich, & J.P. Overington (2012) 'ChEMBL: A Large-scale Bioactivity Database For Chemical Biology and Drug Discovery' Nucl. Acids Res. Database Issue. 40 D1100-1107 DOI:10.1093/nar/gkr777 PMID:21948594 If ChEMBL is incorporated into other works, we ask that the ChEMBL IDs are preserved, and that the release number of ChEMBL is clearly displayed."""@en ; dct:language ; dcat:theme ncit:C17021 ; dcat:keyword "assay"^^xsd:string, "protein"^^xsd:string ; void:vocabulary , , ; dct:conformsTo ; dct:references ; rdfs:seeAlso ; cito:citesAsAuthority ; #Identifiers idot:preferredPrefix "chembl" ; idot:alternatePrefix "chembldb" ; idot:identifierPattern "CHEMBL\\d+"^^xsd:string ; void:uriRegexPattern "http://rdf.ebi.ac.uk/resource/chembl/target/CHEMBL\\d+" ; idot:accessPattern "http://bio2rdf.org/chembl", "http://identifiers.org/chembl.compound/", "http://linkedchemistry.info/chembl/chemblid", "http://www.ebi.ac.uk/chembl/compound/inspect/" ; idot:exampleIdentifier "CHEMBL_TC_4803"^^xsd:string ; void:exampleResource ; #Provenance and Change #Only one data item given for the purpose of the example, all resources should be listed sio:has-data-item ; pav:version "17"^^xsd:string, "17.0" ; pav:previousVersion :chembl16-uniprot-exactMatch-linkset ; dct:source :pubchem-bioassay-09-01-2014 ; pav:retrievedFrom :pubchem-bioassay-09-01-2014 ; prov:wasDerivedFrom :pubchem-bioassay-09-01-2014 ; pav:createdWith :chembl-sql2rdf-exporter-v1 ; #Availability/Distributions dct:format , "application/gzip", "text/turtle" ; dcat:accessURL ; dcat:landingPage ; dcat:downloadURL ; void:dataDump ; .