#NEXUS BEGIN DATA; TITLE Miller, emended ; DIMENSIONS NTAX=131 NCHAR=45; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1 2 3"; MATRIX Anomorrhoea_fischeri ?????????????????0?0??1121000???10????100???? Bathypteris_rhomboidea 2?0?1?0000??200{1 2}00?020?1?10220?010????2???0?0 Chasmatopteris_principalis ????102010??1001000010212101211010????110?0?0 Grammatopteris_baldaufii 2{0 1}1?0?1??0??21110{0 1}2{0 1}20111000??1110????0???200 Grammatopteris_rigollotii 2?0?0?0??0??2111012120111000??1110????0???000 Grammatopteris_freitasii 200?0?0??0??2111012120111000??1110????0???{0 1}00 Guairea_brasiliensis 0?20112120100000???121{1 2}1{1 2}?????????????????{0 2}00 Guairea_carnierii 0?20112120101000???121{1 2}1{1 2}?????????????????{1 2}00 Guairea_millerii 0?20112120101000?0?020{1 2}12?????????????????200 Palaeosmunda_playfordii 0?20102110001002001020{0 1}121000??011????100?110 Palaeosmunda_williamsii 0?201021100020{0 1}2001{0 1}20{1 2}12100111111????100?110 Rastropteris_pinquanensis 200?0?0?????2111000020111000??1110????0???100 Shuichengella_primitiva 10211020?0002011001221212?????????????????20? Thamnopteris_diploxylon 21??100000??{1 2}00??00010{1 2}1?1????????????????1?? Thamnopteris_gracilis 20??100000??{1 2}00??00010{1 2}121????????????????1?? Thamnopteris_gwynnevaughanii 210?100000??200200001?{1 2}12??2201010????100?{1 2}?0 Thamnopteris_javorskii 210?101000??2002000010{1 2}{0 1}2100110110????100?{0 1}?? Thamnopteris_kazanensis ?????0???????00????01?{1 2}1?10{1 2}201010????100???0 Thamnopteris_kidstonii 2110100000??{1 2}00{1 2}00001?212102201010????1010{0 1}{0 1}0 Thamnopteris_schlechtendalii 210?101000??2002000{0 1}1?212102201010????1020{1 2}?0 Thamnopteris_splendida 2?0?101000??20020000102121000??010????11?0??0 Thamnopteris_uralica 2???100000??200{1 2}000010{1 2}1?1????????????????1?? Tiania_yunnanensis 0?20101001??2010?01{0 1}212121????????????????101 Zhongmingella_plenasioides 0?2110212001{1 2}11????121212?????????????????{0 2}?? Osmunda_beardmorensis 1?211021{0 1}00010020010{1 2}00{0 1}01000??01101001???1?1 Millerocaulis_herbstii ??2?1022100010020????????1000??010????10211{0 1}1 Millerocaulis_lutziae 1?2010211000?0???010200101000??110??????????? Millerocaulis_woolfei 0?21102110002002001020111100220010????1?{1 2}?101 Donwelliacaulis_chlouberii 1?2?1110?1??2010?2?2?02?21100??10?????0???200 Itopsidema_vancleavei 1120100001??2010??1?20?1?11220??0?????2???2?0 Osmunda_indentata 0?20102000??200200102001110022001110101110100 Millerocaulis_stipabonettiorum 0?2010?0?0??100200?02011?1000??0??????100???1 Millerocaulis_tuhajkulensis 0?2?102110??10?20?1?11???100220?10????1011??0 Millerocaulis_aucklandicus 0?211022100010020010{1 2}0010100220110????11{1 2}01?? Millerocaulis_beipiaoensis 0?2010211000?002001020111100100010????11101?1 Millerocaulis_broganii 0?21102110002002001020111100220010????1010101 Millerocaulis_gibbianus 0?2?102210002012001020010100220110????10211{0 1}1 Millerocaulis_hebeiensis 0?21102110001002001020011100210010????1111??? Millerocaulis_macromedullosus 0?201022100000020010201111000??010????10101?? Millerocaulis_patagonicus 0?2?10221000000200102001110022?110????11211{0 1}1 Millerocaulis_richmondii 0?20102110001002001020010100101010????1010111 Millerocaulis_santaecrucis 0?20102??00010?200?02001110020??10????1110??? Millerocaulis_spinksii 0?2010210000200{1 2}0010200101000??010????100?101 Millerocaulis_swanensis 0?20102110001002001020010100220010????10101{0 1}1 Millerocaulis_wadei 0?2010211000100{1 2}001020{0 1}1{0 1}100200110????101010? Millerocaulis_websteri 0?201021100020020010200101000??010????10{0 1}0101 Millerocaulis_wrightii 0?2010221000100{1 2}001020010100220110????11111?? Grammatocaulis_donponii 211?100000??10020010101010000??010????0???200 Lunea_jonesii 0?21102120002010?0102011211011110?????0???200 Millerocaulis_chubutensis 0?2?102000??1002001020010100200110????11101?? Millerocaulis_donponii 0?201020000000020010200101000??010????11101?? Millerocaulis_dunlopii ??2?102?100010?20010{1 2}001010022?110????1120111 Millerocaulis_juandahensis 0?20102000??1002001020011100120010????10101?? Millerocaulis_limewoodensis 0???102000001002001020010100220110????11211?? Osmunda_preosmunda 0?21102000??1002001020010100100011010011101?? Osmunda_sinica 0?20102000001002001020010100100011000011111?? Osmunda_chengii 0?2210221000100200102001010020001111001010111 Osmunda_liaoningensis 0?21102110001012001020{0 1}1{0 1}100100011000010101{0 1}1 Osmunda_pulchella 0?2010211000100200102001{0 1}1002{0 2}001101101?11101 Osmunda_plumites 0?201021?000100200102001010010001101001010001 Osmunda_wangii 0?211021100010020010200101002{0 1}0111010010101?1 Osmundacaulis_andrewii 0?20112220??0001001{0 1}21{1 2}12100201010????1020110 Osmundacaulis_griggsii 0?21112220110011001121212100201110????1{0 1}{1 2}01{0 1}0 Osmundacaulis_hoskingii_var_hoskingii 0?21112220110011001121111100202110????110?110 Osmundacaulis_janae ????????????????00????????0011{1 2}110????1110??0 Osmundacaulis_jonesii 0?21112220100011001221212101202010????10{1 2}0110 Osmundacaulis_lemonii 0?21112000??001100102111{1 2}102202110????110?110 Osmundacaulis_nerii 0?21112010110011001{1 2}21212102202110????110?1{0 1}0 Osmundacaulis_pruchnickii 0?21112220110011001121212100201010????1{0 1}{1 2}0110 Osmundacaulis_richmondii 0?20112220110001001121212100201110????110?1{0 1}0 Osmundacaulis_tasmanensis 0?20112?20110001001121212100201110????10201?0 Osmundacaulis_tehuelchensis 0?20112210110001001121{1 2}12100200110????1?101{0 1}0 Osmunda_johnstonii 0?2010211000200200102001010020001100001010111 Osmundacaulis_bamfordiae 0?2?112220??0011001021010102202?10????100?1?0 Osmundacaulis_tidwellii 0?21112110??0011001121111102212010????1{0 1}0?1?0 Osmundacaulis_zululandensis 0?21112220??00110011211111002{0 1}2110????110?110 Gen_indet_estipularis 0?2010211000100210102001?100200?11??????????0 Millerocaulis_amarjolensis 0?201021100010020010201111000??010????1110111 Millerocaulis_australis 0?20102210001002001020?11100220?10????111110? Millerocaulis_indica 0???102000??10020010200101000??010????1110111 Millerocaulis_guptai 0?20102110002002001020?1?1000??010????100?111 Millerocaulis_kolbei 1?211022100000120010100{0 1}11000??010????10211{0 1}0 Millerocaulis_livingstonensis 0?201021100020020010200101000??010????1110100 Millerocaulis_rajmahalensis 0?20102110001002001020011101210010????1110111 Millerocaulis_sahnii 0?201022100010020010200101000??110????111011? Osmunda_tekelili ??2?102210??0002001020{0 1}1110011?01101001110100 Osmunda_burgii 0?201022100020020111221111000??011100011211?? Osmunda_dakotensis 0?2?1022100000020111221111000??0111000100?1?? Osmunda_nebraskensis 0?2010221000000201112211110021001?????10{1 2}11?0 Osmunda_embreei 0?201020000010020010{1 2}00101002{1 2}0111100011101?? Osmunda_cinnamomea_Cretaceous_Canada 0?2010211000201200102001010022011100101110?01 Osmunda_kidstonii ??????????????????????????0022?0110000111???? Osmundacaulis_atherstonei 0?2?1122201?00??001121{1 2}12100202010????100?1{0 1}0 Osmundacaulis_natalensis 0?2?1122201?00?1001121{1 2}12100202010????100?1{0 1}0 Osmundacaulis_skidegatensis 0?21112220110011001121{1 2}12100202010????100?1{0 1}0 Osmundacaulis_whittlesii 0?21112120??00110011212121002{0 1}2110????100?110 Todea_tidwellii 0?22102110002012101020111100210?1?????????100 Osmunda_bransonii 0?201022100000020111?{1 2}111100210111????10211?? Osmunda_moorei 0?21102210000002011122111100200010????10101?0 Osmunda_crossii 0?2010221000100201112{1 2}1111000??0111???100?1?0 Osmunda_arnoldii 0?221021100010020111211111002011111000110?111 ALT1_Osmunda_dowkeri_MILLER 0?221022100010020{0 1}11211111002011111000110?11? ALT2_Osmunda_dowkeri_CHANDLER 0?2210221000100201112{1 2}1111002101111000110?110 ALT2_Osmunda_chandleri 0?221022100010020{0 1}112{1 2}11110020?11?????102111? Osmunda_nathorstii ??????????????????????010?0022?11101001011??? Osmunda_oregonensis 0?2?10221000100200102011110020011101001021111 Osmunda_pluma 0?2?10211000100200102011110010011101001111111 Osmunda_precinnamomea 0?2010211000201200102001010022011100101121?01 Osmunda_cinnamomea_Neogene_USA 0?211021100?201200102001010022001100101110?01 Osmunda_cinnamomea_Neogene_Japan 0?201021100?10?2001020010100220?1100101110??1 Osmunda_iliaensis 0?20102110001002001020111100220011010011{1 2}1111 Osmunda_shimokawaensis 0?20102210001002001020111100200011000011111?1 Osmunda_wehrii 0?2110211000200200102001110020011101001111111 Osmunda_cinnamomea 0?21102110{0 1}0101200102001010022001100101110?01 Osmunda_claytoniana 0?2010211000100200102001{0 1}1002{0 2}011101001011111 Osmunda_banksiifolia 0?201021100020020{0 1}11211111002111111000110?111 Osmunda_bromeliifolia 0?2010211000200201112111110020111110001110111 Osmunda_javanica {0 1}?221021100020020{0 1}112111110020011110001110111 Osmunda_vachellii 0?221021100020020111211111002001111000110?111 Osmunda_japonica 0?2010211000100200102011110022001101011121111 Osmunda_lancea 0?20102110001002001020{0 1}1110020001101011111111 Osmunda_regalis {0 1}?21102110001002001{0 1}20111100220011010110{1 2}1111 Leptopteris_fraseri 0?2210211000100210102001{0 1}10{0 1}2200111000110?101 Leptopteris_hymenophylloides 0?2210211000100210102001{0 1}10020001110001110?01 Leptopteris_wilkesiana 0?2210211000100210102001{0 1}10020001110001110?00 Leptopteris_superba 0?2210211000100210102001{0 1}10020001110001110?01 Todea_barbara 0?221021100020121010200111002101111000110??01 Todea_papuana ????1?????????????????????0????0?1????110???? Osmundacaulis_hoskingii_tabulatus 0?211122201?0011001121111100202110????110?111 Millerocaulis_australis_Vera2010 0???102120??1?02001020{0 1}11000220110????1?{1 2}1110 Millerocaulis_zamunerae 0?20102120000002001020011100220110????11{1 2}1111 ; END; BEGIN ASSUMPTIONS; TaxSet Permian = 1-24; TaxSet Triassic = 25-33; TaxSet Jurassic = 34-72 129; [add 131 here to include M zamunerae] TaxSet Mesozoic_unclear = 73-76; TaxSet Cretaceous = 77-97 130; TaxSet Paleogene = 98-108; TaxSet Neogene = 109-113; TaxSet Extant = 114-128; TaxSet ManyMissing = Anomorrhoea_fischeri Osmundacaulis_janae Osmunda_kidstonii Osmunda_nathorstii Todea_papuana; [> 60% undefined characters] TaxSet Grammatopteris_group = 4-6 12 48; TaxSet Guaireaceae = 7-9 23 24 29 30 49; TaxSet Thamnopteridoideae = 2 3 14-22; [including Bathypteris] TaxSet Permian_Osmundoideae = 1 10 11; TaxSet Osmundacaulis_lineage = 13 62-72 74-76 93-96 129; [including Shuichengella] TaxSet Millerocaulis_complex = 26-28 32-47 50-54 78-85 130; [add 131 here to include M zamunerae] TaxSet Osmundeae = 25 31 55-61 73 77 86-92 97-128; TaxSet Osmunda = 25 31 55-61 73 86-92 98-122; TaxSet Aurealcaulis = 87-89 98-100 104; [including O. chandleri] TaxSet Plenasium = 101-103 116-119; TaxSet Osmundoideae = Permian_Osmundoideae Millerocaulis_complex Osmundeae; TaxSet Osmundaceae = Thamnopteridoideae Osmundacaulis_lineage Osmundoideae; END; BEGIN PAUP; DEFAULTS SAVEDIST Format=Nexus Triangle=Both Undefined=Asterisk; DSET Distance=Mean MissDist=Ignore Objective=LSFit; END;