>KX893543.1_Enterovirus_A71_strain_32-YN_complete_genome
---------------------------------------tcg-c-------------------------------agcactctggtacttcggtacctttgtgcgcct-g-ttttata-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcatagcactccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagaccgc-tcgcgcggttgaaggagaaaacgttcgttacccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacatgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaatcaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagcaattatt-----taccta----tttgtt-ggttttgtaccat-----taacttt--------------ggcttctgtgacc-acccttaattatatcttgacccttaacacagttaaa-----catgggttcgcaagtgtctacacaacgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactataaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcagttgactataggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgaatggccttcctactgctcagattctgacgctacagcggtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtattaacagaaactggggtctttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctggtcgctgtcttaccagagtatgttattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggtgccgatggtttcgagctgcaacacccgtacgtgctcgatgctggcatcccgatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagtggtgcctattagcccactagactacgaccagggagcgacgccagtaatcccctatactatcacattagccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctaaagcctggcacaaaccaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacaaatgccactagctta------atggagagactgcgcttcccagtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagctgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagtcaccttcatgtttactggatcctttatggctaccggtaagatgctcatagcctatacaccaccgggaggtcctctacccaaggatcgggcaaccgccatgttgggcacgcacgtcatctgggatttcgggctgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttggtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcttacataatagcactagcggcagctcaaaagaacttcactatgaagctgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagacagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagactgctcttgatagtttcttcagtagggcgggactagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcacaaatgcgtagaaaggtagagttattcacctatatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgcttcaatatatgtttgtgccacccggagcccctaagccagattctagggagtcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagacccccctgcgcaggtttcagtgccattcatgtcgcctgcgagtgcttatcagtggttttatgacgggtatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctatagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----caccattaagccaactggtaccagtcgcacatcgat---taccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcgaatcttgtttgggaagacagttctcgcgatttgctcgtgtcatccaccaccgctcaaggctgtgacacaattgcccgttgcgattgccagacaggggtgtactactgtaactctatgagaaagcactacccagttagtttttcaaaacccagcctaatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgactgtggtggcatccttagatgccaacatggcgttgtcggcatagtgtctactggtggtaatgggctcgttggttttgctgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgattacatcaag-ggtcttggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttactctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggattaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctagaagagtctatgccctggagaagaaaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgcccgagcaatcgctgataagtaccactctagcgtgtactcgctcccaccagacccggatcactttgatggttacaagcaacaggtggtcacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgatattgaagtgacagattcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattggtgtgtgggaaggccatccaacttagggataggaagtctaaagtcagatacagtgtggacacagtggtttcagaactcattagggaatacagcaataggtccgccattggcaacacaatcgaggctctcttccaaggtccgcccaaattcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgacctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcatcttaatagaggtgtgctcgttatgcagtccatcgccacagtagtggcagttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacccgctcttcgaacagcgacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttggcagtcctcccgcgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaactctcatcactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgtaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaagattgtcggcattcacattggtggcaatggcagacaaggcttttgcgcaggcctcaagaggagttactttgctagtgaacaaggagagatccagtgggtcaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagttggaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagatttcgaacaggccctattctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctatggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgacaaaatcaagaaagggaagtcccgcttgatcgaggccagtagtctaaatgattcagtgtacctcagaatggccttcggacatttgtatgagactttccacgcaaatcctgggacgataactggatcggctgtggggtgtaatcctgacacattttggagcaagctgccaattctgcttcctggttcactctttgcctttgactactcacgttatgacgccagccttagccccgtctggttcagagcgttagaattggttcttagggaggtgggatatagtgaagaggcaatttcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctctggctgttcaggaacatccatcttcaattcaatgatcaacaacatcatcatcagagcgctgctcataaaaacatttaagggcattgatttggatgaactcaatatggttgcttatggagacgatgtgctcgctagctatcccttcccaatagattgcttggaactagcaaagactggtaaggagtatggtctaactatgactcccgctgataaatctccttgctttaatgaggtcaattggggtaatgctaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccacgagtctattcgatggaccaaggacgcacgaaacactcaagatcatgtacggtccttgtgcctcttagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcattggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatat-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taaca-a-g-aatagcca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU936124.1_Enterovirus_A71_strain_SHAPHC5287/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgcaagcactctggtacttcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttacccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtga-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaatcaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttgtt-ggttttgtaccat-----taacttt--------------gacttctgtgacc-acccttaattatatcttgacccttaacacagttaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccatcaattactataaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcaccgctgaagtccccatccgctgaggcgtgtgggtacagtgatcgagtggcgcagttaactataggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgaatggccttcctactgctcagattctgacgctacagcggtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtctaagggatggtactggaagttcccggatgtattaacagaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgttattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgctgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccgatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgccacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagtagtgcctgttagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattagccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagccaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacaaatgccactagctta------atggagagactgcgcttcccagtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagtcactttcatgtttactggatccttcatggctaccggtaagatgctcatagcttatacaccaccaggaggtcctctacccaaggatcgggcaaccgccatgttgggcacgcacgtcatctgggatttcgggctgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagttagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcttacataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctggtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagacgtgattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcgtcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagactactcttgatagtttcttcagtagggcgggactagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagaattattcacctacatgcgctttgatgcagagtttacttttgttgcgtgcacacccaccggggaagttgtcccacaattgcttcaatatatgtttgtgccacccggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttaccagtggttctatgacgggtatcccacattcggggaacacaaacaggagaaagatcttgaatacggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaaataccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----caccattaagccaactggtgccagtcgcacatcgat---taccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccacccacaatgattgggcaaatcttgtttgggaagacagttctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacaattgcccgttgcgattgccagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcgaaacccagcctagtctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgactgtggtggcatccttagatgccaacatggcgttgtcggcatagtgtctactggtggtaatgggctcgttggctttgctgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgattacatcaag-ggtcttggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttaaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggattaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaagtttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaatttctaaacaacttgaaacagctgcca-ctgctagagaatcaaatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctgtacgccatggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgcccgagcaatcgctgataagtaccactctagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcagatggtatccaccgtagacttcatcccaccaatggcttctctcgaggagaagggagtttccttcacctctaagttcgtcatcgcatccactaatgccagtaacatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgatattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattggtgtgtgggaaggccatccaacttagagataggaagtctaaagtcagatacagtgtggacacagtggtttcagaactcattagggagtacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgacctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcatcttaatagagcggtgctcgttatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaaacaaatgctcaagaaacccgctcttcgaacagcgacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccgcgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaatgtccttgatgcagttgaactggtggatgagcagggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatgtcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgatgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgtaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaagattgtcggcattcacattggcggcaatggcagacaaggcttttgcgcaggtctcaagaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagttggaacccagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaagtagatttcgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaggaagcagctcttcattatgcaaaccaattaaagcaattagaaattaatacctctcagatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgacaaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccatgcaaatcctgggacgataactggatcggctgtggggtgtaaccctgacacattttggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgacgccagccttagccctgtctggttcagagcattagaattggttcttagggaggtgggttatagtgaagaggcaatttcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctctggctgttcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaatatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctaattatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtctattcgatggaccaaggacgcacgaaacactcaagatcatgtacgatccttgtgcctcttagcatggcataatggcaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgctggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttacac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT428644.1_Enterovirus_A71_isolate_EV71/SZ04/CHN/2014_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgcaagcactttggtacttcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttacccggccaactacttcggaaaacc-tagtaacgccatgaaagttgcggagagcttcgttcagca--ccc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaatcaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttgtt-ggttttgtaccat-----taacttt--------------gacttctgtgacc-acccttaattatatcttgacccttaacacagttaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaattcagccactg-agggttctaccataaactacaccaccatcaattactataaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcgaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcagttaactataggcaactccaccatcactacgcaagaggcggctaacatcatagtcggttatggtgaatggccttcctactgctcagattctgacgctacagcggtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtattaacagaaactggggtctttgggcaaaatgcacaattccactacctttaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgttattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccgatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagtagtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacactagccccaatgtgttccgaattcgcaggccttaggcaggcggtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacccattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacaaatgccactagctta------atggagagattgcgcttcccagtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagtcacctttatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctctacccaaggatcgggcaaccgccatgttgggtacgcacgtcatctgggatttcgggctgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacggggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcttacataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcaccgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgaaacacgctgtgtccttaactcgcacagcacagctgagactactcttgatagtttcttcagtagggcgggactaattggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagaattattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagtcgtcccacaattgcttcaatatatgtttgtgccacccggagcccctaagccagattctagggaatcccttgcatggcaaaccgctactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcagtggttttatgacgggtatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcccaacaacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----caccattaagccaactggtgccagtcgcacatcgat---taccac---------------------------------------tctcggg------------------------------------------aaatttggacaacagtctggagccatctatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagttctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacaattgcccgttgcgattgccagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctaatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgactgtggtggcatccttagatgccaacatggcgttgtcggcatagtgtctactggtggtaatgggctcgttggttttgctgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgattacatcaag-ggtcttggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttacgctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggattaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaggtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgctacggaagctaaaagagtctatgccctggagaagagaatgaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggttcaccaggcactgggaagtctctagccactggtattattgcccgagcaatcgctgataagtaccactctagcgtgtactcgctcccaccagacccggatcattttgatggttataagcaacaggtggttacagtaatggatgatttgtgtcaaaatcccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaagagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccgacagtgtctgattctgacgctattcgtcgcaggttctacatggactgtgatattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattggtgtgtgggaaggccatccaacttagagataggaagtctaaagtcagatacagtgtggacacagtggtttcagaactcattagggaatacagcactaggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaaaccggccccagacgctattagcgacctcctcgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcatcttaatagagcggtgctcgttatgcaatccatcgccacagtagtggcagttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacccgttcttcgaacagcgacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccgcgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgtaccatgatgtacaactttcctactaaagcgggacagtgtggaggagtggtgacatctgttgggaagattgtcggcattcacattggtggtaatggcagacaaggtttttgcgcaggcctcaagaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagttggaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgttttgcacagtaaagacccccgacttgaggtagatttcgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaaccttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgacaaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggcttttggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggctgtggggtgtaaccctgacacattttggagcaagttgccaattttgctccctggttcactctttgcctttgactactcaggttatgacgccagccttagccctgtctggttcagagcattagaattggttcttagggaggtgggatatagtgaagaggcaatttcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctactgcgtgctcggtgggatgccctctggctgttcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaatatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtacggactaactatgactcctgctgataaatctccttgctttaatgaggtcaattggggcaatgcgaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtctattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcttagcatggcataatggcaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289422.1_Enterovirus_A71_isolate_EV71/P16/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttacccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttgtattggctgcttatggtgacaatcaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttgtt-ggttttgtaccat-----taacttt--------------gacttctgtgacc-acccttaattatatcttgacccttaacacagttaag-----catgggctcgcaagtgtctacacagcgctccggttctcacgaaaactcgaactcagccactg-agggttccaccataaactacaccaccatcaattactataaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcagttaactattggtaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgatgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtctaagggatggtactggaagttcccagatgtattaacagaaactggggtctttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgttattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagtagtgcctattagcccactagactacgaccaaggagcgacaccagtaatccctataactatcacattagccccaatgtgctctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagttaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaactttcaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaataa----------tgtgcccacaaatgccactagctta------atggagagactgcgcttcccagtctcagctcaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttacttggtaagttgtgcgggtattacacccaatggtcaggatcattggaagtcacctttatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctttacccaaggatcgggcaaccgccatgttgggtacgcacgtcatctgggatttcgggctgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgccctagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcttacataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagcacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgaaacacgctgtgtccttaactcgcacagcacagctgagactactcttgatagtttcttcagtagggcgggactagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagaattattcacctacatgcgctttgatgcagagttcaattttgttgcgtgcacacccaccggggaagttgtcccacaattgcttcaatatatgtttgtgccacccggagcccctaagccagattctagggaatcccttgcatggcaaaccgctactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcagtggttttatgacgggtatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcccaacaacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----caccattaagccaactggtgccagtcgcacatcgat---taccac---------------------------------------tctcggg------------------------------------------aaatttggacaacagtctggagccatctatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagttctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacaattgcccgttgcgattgccagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctaatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgactgtggtggcatccttagatgccaacatggcgttgtcggcatagtgtctactggtggtaatgggctcgttggttttgctgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgattacatcaag-ggtcttggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggattaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaggtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgagaagtctctagccactggtattattgcccgagcaatcgctgataagtaccactctagcgtgtactcgctcccaccagacccggatcattttgatggttataagcaacaggtggttacagtaatggatgatttgtgtcaaaatcccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaagagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgatattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattggtgtgtgggaaggccatccaacttagagataggaagtctaaagtcagatacagtgtggacacagtggtttcagaactcattagggaatacagcactaggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgacctcctcgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcatcttaatagagcggtgctcgttatgcaatccattgccacagtagtggcagttgtctcgttggtgtacgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcccaagcaagtgcttaagaaacccgctcttcgcacagcgacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctccctcgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagagaatatcagcactgctagtgatgccaccctagtgattaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgtaccatgatgtacaacttccctactaaagcaggacagtgtggaggagtggtgacatctgttgggaagattgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaagaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagctggaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagatttcgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccctggggataaagaaaagagacatcctagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgcttgacaaaatcaagaaagggaaatcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggctgtggggtgtaaccctgacacattttggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggttcttagggaggtaggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaatatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgactatgactcctgctgataaatccccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggcttcttacccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtctattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcttagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX197460.1_Enterovirus_A71_isolate_HFM088_polyprotein_gene_complete_cds
------------------------------------------------cactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---aactttatactggctgcttatggtgacaattaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgact-acccttaattatatcttgacccttaacacagctaaa-----tatgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcgaactcagctactg-agggctctaccataaactacactaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaacagaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatactcaccctccttacaagcagactcaacccggcgccgatggtttcgagttgcagcacccgtacgtgctcgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatatattaacgcactgccttttgattctgctttgaaccattgcaactttggcctgttagttgtgcctatcagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggctccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccctaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagttta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccctgggcgaaatggaccatggcaatctaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggatttcggactgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctacataatagcactagcggcagcccaaaagaatttcactatgaagttgtgcaaggatgctagcgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagctctcactcacgctctaccagcg--------cccacaggccagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaggttgtcccacaattgctccaatatatgtttgtgccacccggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacgattgcccgttgcgattgtcagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctaatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagagcctggtgactgtggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgccgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgatgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcttccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgatatggccaacgccgctaaggggttagagtgggtttccaacaagatcagtaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgtaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattatcaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgacaagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtatgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtctcagaactcatcagggaatacagcaataggtccgccattggcaacacaattgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgacctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcccgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttgggttgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactctcgacaccaacgaaaaatttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggaacacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacgtctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtggattaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagttggaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttctccaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattgaagcaactagaaattaatacttctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctatcgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacttattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaataatattattatcagagcactgctcataaaaacatttaagggcattgatttggatgagctcaatatggtcgcttatggagacgatgtgctcgctagctatcccttcccaatcgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaacgcgaccttcctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcacaatggtaagcaagaatatgagaagtttgtgagcacaatcaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308424.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/388/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcctac-t-gggcgcaagcactctggcacctcggtacctttgtgcgcct-g-ttttata-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---aactttatactggctgcttatggtgacaattgta-------gaattgttaccatatagctgttggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtgccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----tatgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcgaactcagctactg-agggctctactataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagataagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggacgtgttaacagaaactggggtttttgggcaaaatgcacaattccactatctctaccgatcagggttctgcatccacgtgcagtgcaatgctagtaaattccatcaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgctcgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgctttgaaccattgcaactttggcctgttagttgtgcctatcagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggctccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccctaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaataa----------tgtgcccacgaatgccactagttta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatctaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctctacctaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggatttcggactgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctacataatagcactagcggcagctcaaaagaatttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgcgtccttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagacctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaggttgtcccacaattgctccaatatatgtttgtgccacccggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacgattgcccgttgcgattgtcagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctagtctatgtggatgctagcgagtattacccagccaggtatcaatcgcatctcatgctcgcacagggtcactcagagcctggtgactgtggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgccgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcttccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgatatggccaacgccgctaaggggttagagtgggtttccaacaagatcagtaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattatcaggggctcaccaggtactgggaagtctctagccactggtattattgctcgagcaatcgctgacaagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggcagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtttcagaactcattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgacctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattatccccgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggaccgcttagcagtcctcccacgccactcacaacctggcaaaactatttgggttgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggaacacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacgtctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtggattaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagttggaacctagtgtattccatgacatcttcgagggaagtaaagagccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttctccaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattgaagcaactagaaattaacacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctatcgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggccttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacttattgcgtgcttggtgggatgccgtcaggctgttcaggaacatccatcttcaactcaatgatcaataatattattatcagagcactgctcataaaaacatttaagggcattgatttggacgagctcaatatggtcgcttatggagacgatgtgctcgctagctatcccttcccaatcgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagattcatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcacaatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308406.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/397/2012_partial_genome
-------------------------------------------------actcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---aactttatactggctgcttatggtgacaattaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----tgacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----tatgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcgaactcagctactg-agggctctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcaccgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagtttccggatgtgttaacagaaactggggtttttgggcaaaatgcacaattccactatctctaccgatcagggttctgcatccacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgctcgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatatattaacgcactgccttttgattctgctttgaaccattgcaactttggcctgttagttgtgcctatcagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggctccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccctaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagttta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatctaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcgttggaagttaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggatttcggactgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctacataatagcactagcggcagcccaaaagaatttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaggttgtcccacaattgctccaatatatgtttgtgccacccggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcacaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccactgcccaaggctgtgacacgattgcccgttgcgattgtcagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctaatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagagcctggtgactgtggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtagtgggctcgttggctttgccgatgtcagagacctcttgtggttagatgaggaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcttccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgatatggccaacgccgctaaggggttagagtgggtttccaacaagatcagtaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccactatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattatcaggggctcaccaggcactggaaagtctctagccactggtattattgctcgagcaatcgctgacaagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcagatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttcgttcacctctaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgtaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaattgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtatgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtttcagaactcattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgacctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcccgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacccgctcttcgcacagcaacagtacagggcccgagccttgactttgctctttccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttgggttgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaatctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggaacacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacgtctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtggattaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagttggaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttctccaagtatgtgggaaacacactacatgagcctgacgaatacatcaaagaggcagctcttcattatgcaaatcaattgaagcaactagaaattaatacttctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctatcgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactgggtcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactttttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaaatggttcttagggagataggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacttattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaataatattattatcagagcactgctcataaaaacatttaagggcattgatttggatgagctcaatatggtcgcttatggagacgatgtgctcgctagctatcctttcccaatcgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaacgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcttagcatggcacaatggtaagcaagaatatgagaagtttgtgagcacaattaggtct----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX244186.1_Human_enterovirus_71_strain_SDLY107_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---aactttatactggctgcttatggtgacaattaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaacagaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaactgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctatcagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggatttcggactgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctacataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttaagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacccggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctaatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagagcctggtgactgtggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgccgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgatatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaaatcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtgtccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtaggctggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaactttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgacctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcctaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagttagaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctatcgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaggttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaatatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ004555.1_Enterovirus_A71_isolate_EV71/Hun12-10/2012_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacattttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcagttaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccctcctactgctcagattctgacgctacagctgtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaacagagactggggtttttgggcaaaatgcacaattccactacctttaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcttagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggcacagggacgg------aagatacccaccccccttacaaacagactcaacccggcgccgatggtttcgagttgcaacacccgtatgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggccttaggcaggcagtcacgcaagggttccccaccgagctaaagcctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcattcacatacctggcgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtacccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcggatattacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggccctctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggattttggactgcagtcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggtaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcaggattggttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctcttcacctacatgcgctttgatgcagaattcacttttgttgcgtgcacacccaccgggcaagttgtcccacaattgctccaatatatgtttgtgccacccggagcccctaagccagattctagggaatccctcgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttctatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacttccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacgattgcccgttgcgattgccaaacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctaatctatgtagatgctagcgagtattacccagccaggtaccaatcacatcttatgctcgcacagggtcactcagagcctggtgactgtggtggtatccttagatgccaacatggagtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgccgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgctttcggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtcagaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttaccctcactgcaactttagcgctgataggttgtcatggcagtccttgggcttggatcaaggctaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaattcattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaatttgaaacagctgcca-ctgctagaaaatcagatctcaaacttggaacaatctgctgcatcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgttatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggatacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttcctttacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctagactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagacagaaagtctaaagttagatacagtgtggatacagtggtttcagaacttattagggaatacagtaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaagccagccccagacgctattagcgacctccttgctagcgtggatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaagctatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtgggggagtggtgacatctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtaaacaaggagagatccagtgggttaagcccaataaagagactggaagactcaacatcaatggaccgacccgtaccaagttagaacctagtgtattccatgacattttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctccaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaactaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacacttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagtcctgtctggttcagagcattagaattggttcttagggagataggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaataacattattattagagcactgctcataaaaacatttaagggcatcgatttggacgaactcaatatggtcgcttatggagacgatgtgctcgctagctatcctttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccgatgagagagatccatgagtccattcgatggaccaaggacgcgcgtaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ004552.1_Enterovirus_A71_isolate_EV71/Hun11-32/2011_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aactac-gatcaa-cagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacaccacgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaatacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaattacaccaccattaattactacaaagactcctatgctgccacagcaggtaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagcgatcgagtggcgcagttaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttgacagagactggggtttttgggcaaaatgcacaattccactacctttaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcacttctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggcacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgtcgatggtttcgagttgcaacacccgtatgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacacactgccttttgattctgccttgaaccattgcaactttggtctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaagcctggcacaaatcaatttttaaccactgatgatggcgtttcagcacccattctaccaaacttccaccccaccccgtgcatccacatacctggcgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagattgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccactttactgggtcagttgtgcggatattacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggccctctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggattttggactgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgacatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttaaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctcttcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccgcaattgctccaatatatgtttgtgccacccggagcccctaagccagattccagggaatcccttgcatggcaaaccgccactaacccttcagtttttgtcaagttgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggtacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtagttaggatttacatgagaatgaaacacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgatacgattgcccgttgcgattgccagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctaatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagagcctggtgactgtggtggtatccttagatgccaacatggagtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgccgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatctcattaaactaatctctgcactagtgattgtgatcaggagtgattatgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagaaaatcagatctcaaacttggagcaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccactatacgccgcggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttcctttacctctaagtttgtcatcgcgtccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggaagactggatgcagggcgagccgctagactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtttcagaacttattagggaatacagtaatagatccgccattggcaacacaatcgaggctcttttccaaggtccacccaggttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgacctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctccaaccaatgtagagcggcacctcaatagagcggtgctcgttatgcaatccatcgccacagtagtggcggttgtttcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggtccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaaccatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtgggggagtggtgacatctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcctaataaagaaactggaagacttaacatcaatggaccgacccgtaccaggttagaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctagggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagagttggttcttagggaaataggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggttgttcaggaacatccatcttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcatcgatttggatgaactcaatatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM591215.1_Enterovirus_A71_isolate_wh029_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctgttttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcaaca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatgttggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatattttgacccttaacacagccaaa-----catgggttcacaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacactaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtagcgcagttaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccaccacctctaccgatcagggttctgtatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacggtggcaggcggtacaggaacgg------aagatacccaccccccttacaagcagactcaacccggcgccgacggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacaccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttgctgggtcagttgtgcgggtactatacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctacccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctacataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcatcatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagtagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgaaacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctatatgcgctttgatgcagagttcacttttgttgcgtgcacacccactggggaagttgtcccacaattgctccaatacatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactctatgagaaagcactacccagttagtttttcaaaacccagcctgatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgactgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatctcattaaactaatctctgcactggtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattggttggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacctgaaacagctgcca-ctgctagaaaatcagatctcaaatttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggatcaccaggcactgggaagtctctggccactggtattattgctcgagcaatcgctgataagtaccactccagtgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacaacaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatcttcttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacggaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggggtcaacctggaattaactctcatcactcttgacaccaacgagaagtttagggatatcaccaaatttatcccagaaaatatcagcactgctagtgatgccactctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaggaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcttgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaaccctgacacattctggagcaagttgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaagaggcaatctcactcattgagggaattaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaaaggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttgtac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ456305.1_Human_enterovirus_A_strain_GZ2010-156_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtca-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----tacctg----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctgcacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacactaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtagcgcagttaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccctcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccggagtatgtcattgggacagtggcaggcggtacagggacgg------aagacacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttgacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaattttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacaccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactatacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctacccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagcatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctacataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacgcgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttatgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagccgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagatgctagcgagtattacccagccaggtaccaatcacatcttatgctcgcacagggtcactcagaacctggtgactgcggtggcatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacaaggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttaaaaaatcttattaaactaatctctgcactggtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgcccaaaagcagagcgcttcctggctcaagaagttcaatgacatggccagtgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacctgaaacagctgcca-ctgctagaaaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctgtacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccattccagtgtgtactcgctcccgccagacccggatcattttgatggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaatcccgatggtaaggacatgtctttattctgtcaaatggtatccaccgtagac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>HQ456313.1_Human_enterovirus_A_strain_GZ2010-95_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtgggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatc-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttagttatatcttgacccttaacacagccaaa-----catgggttcacaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacactaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcaccgaaatggcggcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtagcgcagttaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaaggggtggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcattcacgtacagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacaggaacgg------aagatacccatcccccttacaagcagactcaacccggcgccgatggcttcgagttacaacacccgtatgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaatgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcccattagcccactagactacgaccaaggagcgacaccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtctcaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgtttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctacccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctacataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatctaatgctagtgacgagagtatgattgaaacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagaaatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgtcgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattccaagccaacccaaattatgctggcaa----ctccatcaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgactgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagccctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatctcattaaactaatctctgcactggtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggcatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagaaaatcagatctcaaacttggaacaatccgctgcctcacaagaggaccttgaagtcatgtttggaaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagtgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggtcacggtgatggatgatttgtgtcaaaaccctgatggtaaggatatgtctttattctgtcagatggtatccaccgtagatttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtccgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacaacaataggtccgccattggcaacacaatcgaggctcttttccaaggaccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatcttcttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacggaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaacttgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaatttatcccggaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgtaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaacggaccaacccgcaccaagttagaacctagtgtgttccatgacatcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacattaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaggtcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggctatgatgccagccttagccctgtctggttcagagcattggaattggttcttagggagataggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgatcaacaacattattattagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctctttgctttaatgaagtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagggagatccatgagtctattcgatggaccaaggacgcacgaaacacccaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggtcatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF142411.1_Enterovirus_A71_isolate_HNCZ/201203_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacttcggtacctttgtgcgcct-g-ttttaca-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcactcctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttacccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagtttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----tacctg----tttatt-ggttttgtaccat-----taacttt--------------gacttctgtgacc-acccttaattatatcttgacccttaatacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcagttaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggacgtgttaacagaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggtgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttaaaccattgcaactttggtctgttagtagtgcctattagcccactagactacgaccaaggggcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgaactaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccagtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcgggatcattggaagttaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggatttcgggctgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctacataatagcactagcggcagctcaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggggacagcgtgagcagagctctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccactcttgatagcttcttcagtagggcgggattagttggagagatagatctccctcttaagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagaactgttcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacgcccaccggggaagttgtcccacaattgctccagtatatgtttgtaccacccggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcaagtgcttatcagtggttttatgacggatatcccacatttggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctctaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtgggtacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----caccattaagccaactggtgccagtcgcacagcgat---taccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaggacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacaattgcccgttgcgattgccagacaggggtgtactactgcaactctatgagaaaacactacccagttagtttttcgaaacccagcctaatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagagcctggtgactgtggtggcatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgccgacgtcagagacctcttgtggttagatgaagaagttatggaacagggcgtgtccgactacatcaag-ggtcttggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaggctctcaagaattatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccctagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggctcaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaaccagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaaatcatgtttgggaacgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggtactgggaagtctctggccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgtaggttctatatggactgtgacattgaagtgacagactcatacaaaacagatctgggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcgaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggacacagtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgacctccttgctagcgtagacagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcatcttaatagagcggtgctcattatgcaatccatcgccacagtagtggcagttgtctcgttggtgtacgttatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccgcgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggggtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatattaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctaccaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggtctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagctagaacctagtgtgttccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcttgctacggtactgagaatcttgaggctattgatcttcacactagtgcgggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggatgtgagtaaaatgaagttctacatggacaagtatggtcttgaccttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgagactttccacgcaaatcctgggacgataactggatcggctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggaggtaggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacaccatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaatatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaagaggcttcttgcccgatgaacagtttccatttttgattcaccccactatgccaatgaaagagatccatgagtctattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggcaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttatctattccaaattatgaaaatctcagacgcaattggctcgagttatttt-----agaggttacac-------------------------atac---------------ctcaaccc-caccagaa----gtctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ784496.1_Enterovirus_A71_strain_HuzhouE696/2012/CHN_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aacctc-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---aactttatattggctgcttatggtgacaatcaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----tactta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacactgctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacattttcactgaaacggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcagttaactattggcaactccaccatcactacgcaagaggcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgatgctacagcagtagataaaccaacgcgcccggatgtttcagtgaacaggttttacacgttggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaacagaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagttgctgtcctaccagagtatgttattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttagacaggcagtcacgcaagggttccccaccgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcgcctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagtcaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactacgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagcagaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttacctttatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctctacccaaagaccgggcaaccgccatgttgggcacgcacgtcatctgggatttcggactgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagacggggtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggagcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagcgatatcctgcagacgggcaccattcagggagatagg--------gtggcagatgtaattg---agagttccat--------------------------aggagatagcgtgagcagagccctcactcacgccctaccagca--------cccacaggccagaacacacaggtgagtagtcatcgactggatacaggcaaagttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcacacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggtacaac-taacccaaatggttacgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatacatgtttgtgccacccggagcccctaagccagattctagggaatcccttgcatggcagaccgccactaacccctcagtctttgtcaagctgtcagacccccctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacatttggagagcacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccgaattatgctggtaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcgtctaccaccgcccaaggctgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactctatgagaaaacactatccagtcagtttttcaaaacccagcctaatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagagcctggtgactgtggtggtatccttagatgccaacatggcgtcatcggcatagtgtctactggtggtaatggactcgttggctttgccgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttgtagggtctgaaggagcagttgagaaaattttaaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggcttaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggatcttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagtgtgtactcgctcccaccagatccagatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccctgatggtaaggatatgtctttgttctgtcaaatggtatccaccgtagac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>KM211579.1_Enterovirus_A71_isolate_Puyang-451-2012_complete_genome
-------------------------------------------c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aacccc-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-tcccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---aactttatattggctgcttatggtgacaattaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----tactta----ttcatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggctctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcgaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcagttaactattggcaactccaccatcactacgcaagaggcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctactgcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaacagaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccgtacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccatatacctggtgaagtcaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagcagaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttacctttatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggccctctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggatttcggactgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggggtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctacataatagcactagcggcagcccaaaagaacttcaccatgaagttgtgtaaggatgctagcgatatcctgcagacgggcaccattcagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagcccttactcacgctctaccagca--------cccacaggccagaacacacaggtgagtagtcatcgactggatacaggcaaagttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcacacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggtacaac-taacccaaatggttacgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacccggagcccccaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtctttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcaagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcgtgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaaatccaagtaccctttagtagttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggtaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaattttagagtggtcaaccgacatcttgccactcataatgattgggcaaatcttgtttgggaagacagctctcgcgatttgctcgtgtcatccaccaccgcccaaggctgtgacacgattgcccgttgcaattgccagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagtctaatctatgtagatgctagcgagtattacccagccaggtaccaatcacacctcatgctcgcacagggtcactcagagcctggtgactgtggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatggactcgttggctttgccgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgctttcggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcggttgagaaagttttgaaaaatcttattaaactaatctctgctctagtgattgtgatcaggagtgattacgacatggttaccctcacagcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaagggattagagtgggtttccaataagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatttagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgtcgcagattctacatggactgtgacattgaagtgacagactcgtacaaaacggatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtttcagaacttattagggaatatagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccactcaagtttagaccaattaggatt---aatcttgaagaaaaaccagccccagatgctattagcgacctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttgtgcaatccatcgccacagtagtggcggttgtttcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctttccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgctgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaagctcgtgaacgtccttgatgcagttgagctggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatcttagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaagttgttggcattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagcttgaacctagtgtattccatgacattttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggcagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcttgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggctgtggggtgtaaccctgacacattctggagcaagctgccgattttgctccccggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtggaatgccctcaggttgttcaggaacatccatcttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaatatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgacaaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttctgattcaccccactatgccaatgagagagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgtaattggctcgagttatttt-----agaggttatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ004553.1_Enterovirus_A71_isolate_EV71/Hun11-4/2011_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggcacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-c-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-ttcccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atccttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-attcttaattatatcttgactcttaacacaactaga-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacactaccattaattactacaaagactcctatgctgccacagcgggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtagcgcagttgactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattccgacgctacagcagtggacaaaccaacgcgtccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacggtggcaggcggtacagggacgg------aagatactcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacgttaatgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacaccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagtcaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatctaccttactgggtcagttgtgcgggtactatacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctacccaaggaccgggcgaccgctatgttaggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcctaacacagcttacataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacaggctccattcagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgccctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggacacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttaagggcacaac-taacccaaatggttacgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctatttacctacatgcgctttgatgcagaattcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccatttatgtcacctgcgagtgcttatcaatggttttacgacggatatcccacattcggcgaacacaaacaggagaaagatcttgaatacggggcgtgccctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggataccccgtccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaattttagagtggtcaaccgacatcttgccactcacaatgattgggcgaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactctatgagaaaacattacccagttagtttttcaaaacccagcctgatctatgtagacgctagcgagtattacccggccaggtaccaatcacatctcatgctcgcacaaggtcactcagaacctggtgactgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagccatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttataggttctgaaggagcagttgagaaaattttaaaaaatctcattaaactaatctctgcactggtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcatggctcaagaagtttaatgacatggccaacgccgccaaggggttagagtgggtctccaacaagattagcaaatttattgattggcttaaggagaagatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagaaaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccaccgaagctaaaagagtctacgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagtgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggcaaggatatgtccttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagttcgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacaacaataggtccgccattggcaacacaattgaggctcttttccaaggtccactcaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatcttcttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcaggatttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaagaaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaaccatttggattgagcacaaacttgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaattcagggatatcaccaaatttatcccagaaaatatcagcactgctagtgatgccaccctggtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttctgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagcgaacaaggagagatccagtgggttaagcccaataaagaaactgggagactcaacatcaatgggccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaggacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgatgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggaggtaggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgtttttgattcaccccactatgccaatgagggaaatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattacgaaaatcttagacgcaattggctcgagttatttt-----agaggtcatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-t-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KR045303.1_Enterovirus_A71_isolate_THA_A1219_polyprotein_gene_complete_cds
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacactatgaaagttgcagagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaaacca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---aactttatattggctgcttatggtgacaattaga-------gaattgttgccatatagctattggatcggccatccgg--tgtgcaacagagcaattatt-----tactta----ttcact-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacggctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagttcgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgcgggtacagtgatcgagtggcgcagttaactattggcaactccaccatcactacgcaagaggcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctactgcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtattggaagttcccggatgtgttaacagaaactggggtttttgggcaaaatgcacaattccactacctttaccgatcagggttttgcatccacgtccagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgctgatggtttcgagttacaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcattgccttttgattccgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacacaagggttccccaccgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccatatacctggtgaagtcaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagccta------atggagagactgcgcttcccggtctcagcgcaagcag------ggaaaggtgagctgtgtgcggtgtttagagcagaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttacctttatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggccccctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggatttcggactgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgctcgagatggggtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggaagcccaaaagaacttcactatgaagttgtgtaaggatgctagcgctatcctgcagacgggcaccattcagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcacacacgctctaccagca--------cccacaggccagaacacacaggtgagtagtcatcggctggatacaggcaaagttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcacacagtacagccgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctcccccttgagggtacaac-taacccaaatggttacgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgcttcaatatatgtttgtgccacccggagcccccaagccagattctagggaatcccttgcatggcaaaccgctactaacccctcagtctttgtcaaactgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagagcacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggtaa----ctccattaaaccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttactcgtgtcatctaccaccgcccaaggctgtgacacgattgcccgttgtaaatgccagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctaatctatgtagatgctagtgagtattacccagccaggtatcaatcacatctgatgctcgcacagggtcactcagagcctggtgactgtggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatggactcgttggctttgctgacgtcagagacctcctgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcggttgagaaaattttgaaaaatcttattaaactaatctctgctttagtgattgtgatcaggagtgattacgacatggttactctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttgggtattcctatcgctcaaaagcagagtgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaataagatcagcaaatttattgagtggcttaaggagaaaatagtaccagcagccagggagaaggttgaatttctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttttgtcgcaaattccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaaatctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccactgtagacttcatcccaccaatggcctcactcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgtcgcagattctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagtttagaccaattaggatt---ggtcttgaagaaaaaccagccccagacgctattagcgacctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttgtgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggagctcccaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggtccgagtcttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctaacaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgaaaaatttagagatatcaccaaattcatcccagaaaatatcagcgctgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatcttagtggtaagcctacccatcgcaccatgatgtacaacttccctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaagttgttggcattcacattggtggcaatggtagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagctagaacctagtgtattccatgacattttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcgaagaggcagctcttcactatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggaactgagtatcttgaggctattgatctccacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggataagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcttgatcgaagccagtagtctaaatgattcagtgtatctcagaatggctttcggacatttgtatgagactttccacgcaaatcctgggacgataactggatcggctgtggggtgtaatcctgacacattctggagcaagctgccgattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaaaaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaataacattattattagagcactgctcataaaaacatttaagggcattgatttggatgaactcaatatggtcgcttatggagacgatgtgctcgctagctatcctttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgacaaatctccttgctttaatgaggtcaattggggcaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtccatccgatggaccaaagacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgtaattggctcgagttatttt-----agaggttatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-ta----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289423.1_Enterovirus_A71_isolate_EV71/P222/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttacccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----tactta----tttatt-ggttttgtaccac-----taacttt--------------gacttctgtgacc-acccttaattatatcttgacccttaatacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttcccacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcagttaactattggcaactccaccatcactacacaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaacagaaactggggtttttgggcaaaatgcacaattccactatctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaagttccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggtggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggctttgagttgcaacacccgtacgtgcttgatgctggcatcccgatatcacagttaacagtgtgcccacaccagtggattaatttgaggactaacaattgtgctacaataatagtgccatacattaacgcactgcctttcgattctgccttgaaccattgcaactttggcctgttagtagtgcctatcagcccactagactacgaccaaggagcgacgccagtgatccctataactatcacattggccccaatgtgctctgaatttgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgctactagcttg------atggagaggctgcgcttcccagtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacactcaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctctacccaaggaccgggcaaccgccatgctgggcacgcacgtcatctgggatttcgggctgcaatcgtctgtcacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagcatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctacataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagcgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggacactggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggactagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagaactattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgcttcaatatatgtttgtgccacccggagcccctaagccagattctagggaatctcttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcagtggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgagtacggggcgtgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctctagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaactatgctggcaa----caccatcaagccaactggtgccagtcgcacagcgat---taccac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacaattgcccgttgcgattgccagacaggggtgtattactgtaactctatgagaaaacactacccagttagtttttcgaaacccagcctaatctatgtagatgctagcgagtattacccagccaggtatcaatcacatctcatgctcgcacagggtcactcagaacctggtgactgtggtggcatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgccgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtcttggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgccatggcagtccttgggcttggatcaagaccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctacca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagtttaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggtactgggaagtctctagccactggtattattgcccgagcaatcgctgacaagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgccaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctatccgccgcaggttctacatggactgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagataggaagtctaaagtcagatacagtgtggacacagtggtttcagaacttattagggaatacagtaataggtccgccattggcaacacgatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgaccttcttgctagcgtagatagtgaagaagttcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcatcttaatagagcggtgctcgttatgcaatctatcgccacagtagtggcagttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccgcgccactcacaacctggtaaaactatttggattgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaatttatcccagagaatatcagcactgctagtgatgccaccctggtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtacattatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacaatgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacgcgtaccaagttagaacctagtgtgtttcatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccggcttgaggtagatttcgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacttctcaaatgagcatggaggaggcctgctacggcactgagaatcttgaggctattgaccttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgaccttccttactccacttatgtcaaggatgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtaccttagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagagttggttcttagggaggtaggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctactgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaataacattattatcagaacactgctcataaaaacatttaagggcattgatttggatgaactcaatatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcatggaactagcaaagactggtaaggagtatggtctgactatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcaaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtctattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtctttgtgccttctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX244187.1_Human_enterovirus_71_strain_SDLY153_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca---ccccccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aactac-gatcaa-tagcaggcataacgctccagttgtgtcttga-tcaagcacttctg-tctccccggaccgagtatcaatagactgc-tcgcgcggctgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagctagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----tactta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgaccctttacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaacagaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccatgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaacccccttacaagcagactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaaggatttcccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcgcctattctgccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagaccgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccggtcctgggcgaaatggaccgtggcaatccaccttactgggtcagttgtgtgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttactcttgtaataccatggatcagcaacactcattatagagcgcatgcccgggatggagtgtttgattactataccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcttatataatagcgctagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgttagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttaagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggcaagttgtcccacaattgctccaatatatgtttgtgccacccggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctacgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgcttgtgtcatccacctccgcccaaggttgtgatacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcgaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaaaaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgatatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaaatcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatggataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtgtccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtaacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaactttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgacctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcctaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagttagaacctagtgtattccctgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctatcgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaggttctacatggacaagtgtggtcttgatcttccttactccacttatgttaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcgaatcctgggacgataactggatcagccgtggggtgtaaccctgacacactctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgaccaacaacattattatcagagcactgctcataaaaacatttaagggtattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaaccagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttactttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggacgagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289430.1_Enterovirus_A71_isolate_EV71/P868/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggtgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgcccacaagcca-gcggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---aactttatattggctgcttatggtgacaattaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----tactta----tttatt-ggttttgtaccat-----taacttt--------------aaattctgtgacc-actcttaattatatcttgactcttaacacagctaaa-----catgggctcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgctacagcaggcaagcagagcctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcgtgtgggtacagtgatcgagtggcgcagttaactattggcaactccaccatcaccacgcaagaggcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaacagaaactggggtttttgggcaaaatgcacagttccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggggcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggtggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcttgctagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagtcaggaacttgctagagttatgtcaggtggagaccattctggaggttaacaa----------tgtacccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggcgaactgtgtgcggtgtttagagcagaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttacctttatgtttactggatccttcatggccaccggtaagatgctcatagcctatacaccaccaggaggtcctctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggatttcgggctgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggggtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctacataatagcactggcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagcgatatcctgcagacgggcaccattcagggagatagg--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagtagtcatcgactggatacgggcaaagtaccagcactccaagctgctgaaattggagcttcatcaaatgctagtgacgagagcatgattgagacacgctgtgtcctcaactcacacagtacagctgagaccactcttgatagtttcttcagtagggcaggattagttggagagatagatctccctcttgagggtacaac-taacccaaatggttacgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtaccacccggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtctttgtcaagctgtcagacccccctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcagtggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtatcctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggataccccgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggtaa----ctccattaagccaactggtgccagtcgcactgcgat---caccac---------------------------------------ttttggg------------------------------------------aaatttggacaacagtttggggccatttatgtgggcaactttagagtggttaaccgtcattttgccactcacaatgattgggcaaattttgtttgggaagacagctctcgcgacttgcttgtgtcatttaccaccgcccagggctgtgatacgattgcccgttgcgattgccagacaggggtgtactactgtaactttatgagaaaacactacccagttagtttttcaaaacccagtttaatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggccactcagagcccggtgactgtggtggtatccttagatgtcaacatggcgtcgtcggcatagtgtctactggtggtaatggactcgttggctttgccgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgattacatcaag-ggtcttggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggattaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaggtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctacgccctggagaagagaatgaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgcccgagcaatcgctgataagtaccactctagcgtgtactcgctcccaccagacccggatcattttgatggttataagcaacaggtggttacagtaatggatgatttgtgtcaaaatcccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaagagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgatattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattggtgtgtgggaaggccatccaacttagagataggaagtctaaagtcagatacagtgtggacacagtggtttcagaactcattagggaatacagcactaggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgacctcctcgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttgtgcaatccatcgccacagtagtggcagttgtctcgttggtgtacgttatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacctgctcttcgtacagcaacagtgcagggcccgagccttgactttgctctctccctgctgagaaggaacatcaggcaagtccaaacagaccagggtcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgagctggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgaaaagtttagggatattaccagattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgatgttgtgcagtatggcttcgtgaatcttagtggtaagcctacccaccgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaagttgttggcattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggggagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagctagaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacacgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctactaccagggacgtgagtaaaataaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcttgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcgggcatttgtatgaggctttccacgcaaatcctgggacgataactggatcggctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattagtccttagggagataggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaataacattattatcagagcgctgctcataaaaacatttaagggcattgatttggatgaactcaatatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgacaaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgtaattggctcgagttatttt-----agagattatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF142412.1_Enterovirus_A71_isolate_HNCZ/201208_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacttcggtacctttgtgcgcct-g-ttttaca-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcactcctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttacccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagtttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctactataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagcctcaagcaggatccagataagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgggtggcgcagttaactattggcaactccaccatcactacgcaggaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggacaaaccaacgcgcccggatgtttcggtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaacagaaaccggggttttcggccaaaacgcacaattccactacctctaccgatcagggttctgcattcacgtgcagtgcaatgccagcaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcgggcggtacagggacgg------aagatacccaccccccttacaagcaaactcaacctggcgccgacggttttgagttgcaacacccgtatgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacatcaacgcactgccttttgactctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccagggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagttaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggcgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaacgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttactttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctctacccaaggaccgggcaactgccatgttgggcacgcacgtcatctgggattttggactgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtaccagacaaattacgtggttccaattggtgcgcctaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggtcagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgccagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctctcaagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcggagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtaccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaggatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtgggaacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcatgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctgttcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacgattgcccgttgcaattgccagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagatgctagcgagtattacccagccagataccaatcacatctcatgctcgcacagggtcactcagaacctggtgactgtggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgctgacgtcagagatctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggtttcactgacgcagtctcaagggaggttgaagttctcaagaactatcttatagggtctgaaggagcagttgagaaaattttaaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggtagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggcttaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagccaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattatagctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcagcaagtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtatccttcacctctaagtttgtcatcgcatccactaacgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagattggatgcagggcgagctgctaaactgtgctctgaaaataacactgcaaattttaaacgttgcagtccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtggatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcatattctggtgctcctaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgattttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaagggcacttcaccatgttgggcgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggacgagcaaggagttaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatataaccaaattcatcccagaaaatatcagcactgctagtgatgctaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggttttttgaatctcagtggcaagcctacccatcgcaccatgatgtacaactttcctaccaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggcggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaatagagaaactggaagactcaacatcaatggaccaacccgcaccaagctagaacctagcgtatttcatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagaccctcgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacacgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactggaaattgatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacattttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagcctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaaccctgggacgataactgggtcggccgtggggtgtaatcctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagagagataggatatagtgaggaggcaatctcactcattgaggggatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtggaatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaaaactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctaaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtccatccgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttatgcctcctagcatggcataacggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttacac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289421.1_Enterovirus_A71_isolate_EV71/P156/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatgttggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-accctcaattatatcttgaccctcaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagattcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcagttaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtctcagtgaacaggttttacacattggacactaaattatgggagaagt------------------catccaagggatggtactggaagttcccggacgtgttaacagaaactggggtttttggccaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgccagcaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcatcgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaaacaaactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggtgtcccaatatcacagttaacggtgtgcccacaccagtggattaatttgaggaccaacaattgtgccacaataatagtgccatacatcaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagtcgtgcctattagcccactggactacgaccagggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagttaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaattttcaccccaccccgtgcatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaacgccactagctta------atggagagactgcgcttcccggtttcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagctgtgcggatattacacccaatggtcaggatcattggaagttacctttatgtttactggatcctttatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctttacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggattttggactgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactataccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccaaaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagagcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtaccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagttttcgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcctatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtgggaacctccaagtctaagtaccctctagtggttagaatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctgttcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgtacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaattttagagtggtcaaccgacatctagccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactctatgaggaaacactacccagttagtttttcaaaacccagcctgatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgtggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgccgacgttagagacctcctgtggttagatgaagaagctatggaacagggcgtgtccgactacattaag-agtctcggggatgcttttggaacaggttttactgacgcagtctcaagggaggttgaagctctcaaaaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgttgataggttgtcatggcagtccttgggcttggattaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtgccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggagcaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattatcaggggctcaccaggcactgggaaatctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcctctctcgaggagaaaggggtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctatccgccgcaggttctatatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagattggatgcagggcgagccgctaaactgtgctctgaaaataacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaactcattagggaatacagcaataggtccgccatcggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcatcttaatagagcggtgcttgttatgcaatccatcgccacggtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggcgcatattctggtgctcctaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggcgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaacttgtgaacgtccttgatgcagttgagctggtggatgagcaaggagttaacctggaattaaccctcatcactcttgacaccaatgaaaaatttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacagagcatatgccatcaatgttcgtcccggtgggtgatgttgtgcagtatggctttttgaacctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggcggcaatggcagacaaggtttttgcgcaggcctcaaaagaagttactttgctagtgaacaaggagaaatccagtgggttaagcctaataaagaaactggaagactcaacatcaatggaccaacccgcaccaaactagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccggcttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaagcagctcttcattatgcgaatcaattaaagcaactagaaattgatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagcgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctgccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagagagggaagtcccgcctgatcgaggccagtagcctaaatgattcagtgtatctcagaatggctttcggacatttgtatgaggccttccacgcaaatcctgggacggtaactggatcagccgtggggtgtaaccccgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggttatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttacggagacgatgtgctcgctagctatcccttccctatcgattgcttggaattagcaaagactggcaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtccatccgatggaccaaagacgcacgaaatactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttacgc-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU936121.1_Enterovirus_A71_strain_SHAPHC5251/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------tagt-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcgggaagcc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacaactgaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgcgtggcgcagttaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtattggaagttcccggatgtgttaacagaaactggggtttttggccaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgccagcaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagacacccaccccccttacaagcaaactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacatcaacgcactgccttttgattctgccctgaaccactgcaactttggcctgttagttgtgcctattagcccactggactacgatcagggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggccttaggcaggcagtcacgcaagggttccccactgagttaaagcctggcacaaatcaatttttaaccaccgatgatggtgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagctatgccaggtggagaccattctggaggttaacaa----------cgtgcccacgaacgccactagctta------atggagaggctgcgcttcccggtctcggcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctctacccaaggaccgggcaaccgcaatgttgggcacgcacgtcatctgggattttggactgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagcatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtcctcaactcgcatagtacagctgagaccactcttgacagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taaccctaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtaccacctggagcccctaagccagattctagggaatctcttgcatggcaaaccgccactaacccctcagtttttgtcaagttgtcagaccctcctgcgcaggtttcagtgccatttatgtcacctgcgagtgcctatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcggtgcggactgtgggaacctccaagtccaagtatcctttagtggttaggatttacatgagaatgaagcacgtcagagcgtggatacctcgcccgatgcgtaatcagaactacctgttcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttgga------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaattctatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagatgctagcgagtattacccagccagataccaatcacatctcatgctcgcacagggtcactcagaacctggtgactgtggtggtatccttagatgccaacatggtgtcgtcggcatagtgtctactggcggtaatgggctcgttggctttgccgacgtcagagacctcctgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-aatctcggggatgcttttggaacaggtttcactgatgcagtctcgagggaggttgaagctctcaaaaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcaggagtgactacgacatggtcaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggattaaagccaaaacagcctctattttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgccgccaaggggttagagtgggtttctaacaaaattagcaagtttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctactagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggatcttgaggtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagtttcaaccgctatacgccacggaagctaaaagagtctacaccctggagaagagaatgaacaactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaaatctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggctacaagcaacaggtggttacagtaatggatgacttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccactgtagacttcattccaccaatggcttctctcgaggagaagggagtctccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgccattcgccgcaggttttacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagattggatgcagggcgagccgctaaactgtgctctgaaaataacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtagtttcagaacttattagggaatacagcaacaggtccgccatcggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaggtgcgtcagtactgc-agagatcaaggctggatcattcctgaagctcccactaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacggtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcaggatttcagggtgcgtattctggtgcccccaagcaagtgcttaagaaacccgctcttcgcacggcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaacaggggcatttcaccatgttgggcgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaatgtccttgatgcagttgaactggtggatgagcaaggagttaacctggaattaaccctcatcactcttgacaccaatgaaaaatttagggatatcaccaaattcatcccagaaaatatcagtactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggcgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaatttccctactaaagcaggacagtgtggaggagtggtgacatctgttgggaagattgttggcattcacattggcggcaatggcagacaaggtttttgcgcaggccttaaaaggagctactttgctagtgaacaaggagaaatccagtgggttaagcccaataaagaaactggaaggttcaacatcaatggaccaactcgcaccaagctagaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagatccccgacttgaggtagattttgaacaagccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaagcagctcttcattatgcaaatcaattaaagcaactagaaattgacacctctcaaatgagcatggaggaggcctgctacggtactgaaaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctgccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatctcccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagcctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaaccctgggacgataactggatcagccgtggggtgcaaccctgacacattttggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaggaggcaatctcactcattgagggaatcaaccacacgcatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgattaataacattattatcagagctctgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcctggaattagcaaagactggtaaggagtatggtctgactatgactcctgctgacaaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttctgattcaccccactatgccaatgagagagatccatgagtccatccgatggaccaaagacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctggcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattacgaaaatcttaggcgtaattggctcgagttatttt-----agaggttacac-------------------------atac---------------ctcaaccc-caccagag----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT428645.1_Enterovirus_A71_isolate_EV71/SZ07/CHN/2014_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccatttaca-actcctat-t-agacgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactataaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatctttactgaaatggcggcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgtgtggcgcagttaactattggcaactccaccatcactacacaagaagcggctaacatcatagttggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacgttggacactaaattatgggagaaat------------------cgtccaagggatggtattggaagttcccggacgtgttaacagaaactggggtttttggccaaaatgcacaattccactacctttaccgatcagggttctgtattcacgtgcagtgcaatgccagcaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcaaactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgagaaccaacaattgtgctacaataatagtgccatacatcaacgcactgccttttgattctgccttgaaccactgcaactttggcttgttagttgtgcctattagcccactagactacgaccagggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggccttaggcaggcagtcacgcaagggttccccactgagttaaagcctggcacaaatcaatttttaaccaccgatgatggtgtttcagcacccattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagctatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaacgccactagctta------atggagagattgcgcttcccggtctcggcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggacagttgtgcggatattacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggattttggactgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagctctcactcacgctctaccagca--------cccacaggccagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtcctcaattcgcatagtacagctgagaccactcttgacagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taaccctaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctgttcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtaccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagttgtcagaccctcctgcgcaggtttcagtgccatttatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtgggaacttccaagtccaagtatcctttagtggttaggatttacatgagaatgaagcacgtcagagcgtggatacctcgcccgatgcgtaaccagaattacctgttcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatctagccactcacaatgattgggcaaatcttgtttgggaagacagctctcgtgacttgctcgtgtcatccaccaccgcccaaggctgtgacacgattgcccgttgcgattgccagacaggggtgtactattgtaattctatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgactgtggtggtatccttagatgccaacacggtgtcgtcggcatagtgtccactggtggtaatgggctcgttggctttgccgacgtcagagacctcctgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-aatctcggggatgcttttggaacaggtttcactgacgcagtctcaagggaggttgaagctctcaaaaactatcttatagggtctgaaggagcagttgagaagattttgaaaaatcttatcaaactaatctctgcactggtgattgtgatcaggagtgactacgacatggtcaccctcactgcaaccttagcgctgataggctgtcatggcagtccttgggcttggattaaagccaaaacagcctctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttctaacaaaattagcaagtttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaatttggaacaatctgctgcctcacaagaggatcttgaggtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctacaccctggagaagagaatgaacaattacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaaatctctagccactagcattattgctcgagcaatcgctgataagtaccactccagtgtgtactcgcttccaccagacccagatcattttgatggctacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccactgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgccattcgccgcaggttctacatggactgtgacattgaagtgacagactcatacaaaacagatctaggtagattggatgcagggcgagccgccaaactgtgctctgaaaataacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaacaggtccgccatcggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaggtgcgccagtactgc-agagatcaaggttggatcattcctgaagctcccaccaatgtagagcggcacctcaatagagcggtgcttgttatgcaatccatcgccacggtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcaggatttcagggtgcgtattctggtgcccctaagcaagtgcttaagaaacccgctcttcgcacggcaacagtgcagggcccgagccttgactttgctctctccctattgagaaggaacattaggcaagtccaaacagaacaggggcatttcacaatgttgggcgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaatgtccttgatgcagttgaactggtggatgagcagggagttaacctggaattaaccctcatcactcttgacaccaatgaaaaatttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgttcgtcccggtgggcgacgttgtgcagtacggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactagagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggcggcaatggcagacaaggtttttgcgcaggcctcaaaaggagctactttgctagtgaacaaggagaaatccagtgggttaagcccaataaagaaactggaaggctcaacatcaatggaccaactcgcaccaagctagaacctagtgtattccatgacatctttgagggaagtaaagaaccagctgtcttgcacagtaaagatccccgacttgaggtagactttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaagcagctcttcattatgcaaatcaattaaagcaactagaaattgacacctctcaaatgagcatggaggaggcctgctacggtactgaaaatcttgaggctattgatcttcacactagtgcaggctacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatctcccttattccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagcctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaaccctgggacgataactggatcagccgtggggtgcaatcctgacacattttggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaggaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcgggctgttcaggaacatccatcttcaactcaatgatcaataacattattatcagagctctgctcataagaacatttaagggcattgatttggatgaactcaatatggtcgcttatggagatgatgtgctcgctagctatcccttcccaattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacaatttccatttctgatccaccctactatgccaatgagagagatccatgagtccatccgatggaccaaagacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctggcatggcacaatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattacgaaaatcttaggcgcaattggctcgagttatttt-----agaggttacac-------------------------atac---------------ctcaaccc-caccagag----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP198624.1_Enterovirus_A71_isolate_Henan-ZMD/CHN/2012_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-ggggctac-t-gggcgcgagcactctggtgcctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccgaccaactacttcggaaagcc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaattcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccactatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggacgtgttaacagaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttttgcatccacgtgcagtgtaatgccagtaagttccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagactcaacccggcgccgatggcttcgagttgctacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggccttagacaggcagtcacacaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggaaactattctggaggtcaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtattcagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagggcacatgcccgagatggagtgttcgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagaacagctgagaccactcttgatagtttcttcagaagggcgggattagttggagagatagatctccctcttaagggcacaac-taaccctaatgtatatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtaccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagttgtcagaccctcctgcgcaggtttcagtgccatttatgtcacctgcgagtgcctatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtgggaacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagagcgtggatacctcgcccgatgcgtaaccagaactacctgttcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatctagccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccacggctgtgacacgattgcccgttgcgattgccagacaggggagtactactgtagctctatgagaaaacactacccagatagtttttcaaaacccagcctgatctatgtagatgctagcgagtattatccagccaggtcccaatcacatctcatgctcgcacagggtcactcagaacctggtgactgtggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtgatgggctcgttggctttgccgacgtcagagacctcctgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-agtctcggggatgcttttggaacaggtttcactgactcagtctcaagggaggttgaagctctcaaaaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcaggagtgactacgacatggtcgccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggattaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaaggacatggccaacgccgctaaggggttagagtgggtttccaacaaaattagcaagtttattgattgccttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaagaccttgaggtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctacaccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaaatctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggctacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccactgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgccattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagattggatgcagggcgagccgctaaactgtgctctgaaaataacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccatcggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agagatcaaggttggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacggtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcaggatttcagggtgcatattctggtgctcctaagcaagtgcttaagaaacccgctcttcgcacggcaacagtgcagggtccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggcgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaatgtccttgatgcagttgaactggtggatgagcaaggagttaacctggaattaaccctcatcactcttgacaccaatgaaaaatttagggatatcaccaaattcattccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgttcgtcccggtgggcgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggcggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagaaatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaactcgcaccaagctagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagatccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaagcagctcttcattatgcaaatcaattaaagcaactagaaattgacacctctcaaatgagcatggaggaggcctgctacggtactgaaaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgctctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagcctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaaccctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaataacattattatcagagctctgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttctgattcaccctactatgccaatgagagagatccatgagtccatccgatggaccaaagacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattacgaaaatcttaggcgcaattggctcgagttatttt-----agaggttacac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU936122.1_Enterovirus_A71_strain_SHAPHC5267/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------at-t-gaaacttagaag--------------cagca-aatcac-gatcaa-tagcaggcataacgctccagttatgtctcga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgtccgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---aactttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcgattatt-----ttccta----tttatt-ggttttgtaccat-----taacttt--------------gggttctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggatctcatgaaaactcaaactcagccactg-agggttctaccataaattacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaaacaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctttaccgatcagggttctgcatccacgtacagtgcaatgccagtaaattccatcaaggagcactcctagtcgccgtcctaccagaatatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgctgatggcttcgagctgcaacacccgtatgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacatcagtggatcaacttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaaggattccccaccgaactgaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaatttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtttcggcacaagcag------ggaagggtgagctgtgtgcggtatttagagccgaccctgggcgaaatgggccgtggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggccaccggcaagatgctcatagcctacacaccgccaggaggtcctctgcccaaggatcgggcgaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcatctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggctagtcagtatatggtatcagacgaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcacaatgaaattgtgtaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatag---aaagctccat--------------------------aggagatagcgtgagcagagctctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagccatcgactggatacaggcaaggtcccagcactccaagctgctgaaattggggcatcatcaaatgctagtgatgagagcatgattgagacgcgctgtgttctcaactcgcacagtacagctgagaccactcttgatagcttcttcagcagggcgggattagttggagaaatagatctccctcttgagggcacaac-taacccaaacggttacgccaactgggacatagatataacaggttatgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacgcccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgccactaacccctcagttttcgttaagctgtcagaccctccagcgcaggtttcagtaccattcatgtcacccgcgagtgcttaccaatggttttatgatggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggagcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtctaagtaccctttagtagttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgaaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacagcaatctggggctatttatgtgggtaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatttatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagagcctggtgattgcggtggtattcttagatgccaacatggcgtcgttggcatagtgtctactggtggtaatgggctcgttggctttgcagatatcagagacctcttgtggttagatgaagaagctatggaacagggtgtgtccgactacattaag-ggtctcggagatgcttttggaacaggattcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaattaatctctgcactggtaattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaggaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgctacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtcttattattaggggctcgccaggtacagggaagtctctagccactggtattattgctcgagcgatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcatcccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagcaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttttacatggactgtgacattgaagtgacagattcatacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacacagcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacaacaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagctccagacgctattagcgatctccttgctagcgtagatagtgaagaggtgcgccagtactgt-agagatcaaggctggattatccctgaagttcccaccaatgtagagcggcaccttaacagagcagtgcttgttatgcaatctatcgccacagtagtggcggttgtctcattggtatatgtcatctacaagctttttgcagggtttcagggtgcgtattctggtgctcctaggcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccttactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttggcagtcctcccacgccactcacaacctggtaaagctatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcactaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcatatgccatcaatgtttgtcccggtaggtgacgttgtgcagtatggctttttgaatctcagtggtaagcccacccatcgcaccatgatgtacaacttccctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgttggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaagaagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactgggagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtgttccatgacatcttcgagggaaacaaagaaccagctgtcctgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaatcaatacctctcaaatgagcatggaggaggcctgctacggtaccgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagcgccctggggataaagaaaagagacattttagaccctaccaccagggatgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaagccattagtatgaatgattcagtgtacctcagaatggctttcggacatttgtatgaggcctttcacgcaaatcctgggacgataactggatcagctgtggggtgcaaccccgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggtttagagcattagaattggttcttagggagatagggtatagtgaggaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaacgaggtcaattggagtaatgcgaccttcctcaaaaggggtttcttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccatccgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagggctttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agagggtatat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU936128.1_Enterovirus_A71_strain_SHAPHC5365/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aatcac-gatcaa-tagcaggcataacgctccagttgtgtctcga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagctagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcgattgtc-----taccta----tttatt-ggttttgttccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagccaaa-----catgggctcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatctttactgaaatggcagcgccactgaagtccccatccgctgaagcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttacggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaagttgtgggagaaat------------------cgtctaaaggatggtactggaagttcccggatgtgctgactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtacagtgcaatgccagtaaattccatcaaggagcactcctagtcgccgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggtgctgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacatcaacgcactgccttttgactctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgctctgaattcgcaggtcttaggcaggcagtcacgcaaggattccccaccgagctgaaacctggcacaaatcagtttctaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaggttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactccgcttcccggtttcggcacaagcag------ggaagggtgagctgtgtgcggtatttagagccgatcctgggcgaaatgggccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcacctttatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcatctgttaccctagtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagttagtatatggtatcagacgaattacgtggttccaatcggtgcgcctaacacagcctatataatagcactagcggcagcccaaaagaacttcacaatgaaattgtgtaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatag---aaagctccat--------------------------aggagacagcgtgagcagagccctcactcacgctctaccagca--------cccaccggccagaacacacaggtgagcagccatcgactggatacaggcaaggttccagcactccaagctgctgagattggagcatcatcaaatgctagtgatgagagcatgattgaaacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagaaatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgtacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtaccatttatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggagcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtctaagtatcctttagtagttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctctattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctgtttatgtgggtaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgatctgctcgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcttgatctatgtagaggctagtgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgtcaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggttttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggtgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagacctatcttataggatctgaaggagcagttgagaaaatcttgaaaaatcttattaaattaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaaattcaatgacatggccaatgccgccaaggggttagagtgggtttctaataagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaagttgaattcctaaataacttgaaacagttgcca-ctactagagaatcagatctcaaacttggaacagtctgctgcctcacaggaggaccttgaagtcatgtttgggaacgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacagaagctaaaagagtctatgccctggagaagagaatgaacaactatatgcagttcaagagcaaacaccgaattgaacctgtatgtcttattattaggggctcaccaggcacagggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggacgatttgtgtcaaaaccccgatggtaaggatatgtctctgttctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagcaatatcatagtaccaacagtgtctgattctgacgccattcgccgcaggttttacatggactgtgacattgaagtgacagactcatacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacggtgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggacacggtggtttcggaacttattagggaatacagcaataggtccgccattggtaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagctccagacgctattagcgatctccttgctagcgtagatagtgaagaggtgcgccagtactgc-agagatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaacagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtttcattggtatatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaagcctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgctgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaagctatttggatcgagcacaaactcgtgaacgttcttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaagtattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaagattgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtgttccatgacatcttcgagggaaacaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactgcatgagcctgatgagtacatcaaagaggcagctcttcattatgcgaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgaaaatcttgaggctattgaccttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccactagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaagccagtagtctgaatgattcagtgtacctcagaatggctttcggacatttgtatgaggcctttcacgcaaatcctgggacgataactggatcagctgtggggtgcaaccctgacacattctggagcaaactgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagtcttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaggaggcgatttcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaattcaatgatcaacaacattattatcagagcgctgctcataaaaacatttaagggcattgacttggatgaactcaacatggttgcttatggagacgatgtgctcgctagttatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgacccctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtagggagagctttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttat---------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ508182.1_Enterovirus_A71_strain_Hubei-HG/CHN/2012_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aatcac-gatcaa-tagcaggcataacgctccagttatgtctcga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgcagatcaggtcgatgagtcaccgca-tcccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcttccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcgattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtccacacagcgctccggttcccacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgaccgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaatatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtacagtgcaatgccagtaaattccatcagggagcactcctagtcgccgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgctgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatatattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacaccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctgaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaggttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagattgcgcttcccggtttcggcacaagcag------ggaagggtgagctgtgtgcggtatttagagccgatcctgggcgaaatgggccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgttatctgggactttgggctgcaatcgtctgttaccctagtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacgaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcacaatgaaattgtgtaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtgatag---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagccatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagcgatgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagaaatagatctccctcttaagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccgcaattgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagatcctccagcgcaggtttcagtaccattcatgtcacccgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggagcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtctaagtaccctttagtagttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggctatttatgtgggtaattttagagtggtcaaccgacatctcgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcttgatctatgtagaggctagtgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggtatagtgtctactggtggtaatgggctcgttggttttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggtgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaattaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccctagcactgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgccgccaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaataataccagcagccagggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaggaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtcttattattaggggctcaccaggcacagggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcattgcatccactaatgccagcaatatcatagtgccaacggtgtctgattctgacgctattcgccgcaggttttacatggactgtgacattgaagtgacagactcatacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagctccagacgctattagcgatctccttgctagcgtagatagtgaagaggtgcgccagtactgc-agagatcaaggctggattattcctgaagctcccaccaatatagagcggcaccttaacagagcggtgcttgttgtgcaatctgtcgccacagtagtggcggttgtctcattggtatatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctctctactgagaaggaacatcaggcaagtccaaacagaccaggggcattttactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaagctatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgttccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtgttccatgacatcttcgagggaaacaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcgaatgagcatggaggaggcctgctacggcactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaagccagtagtctgaatgattcagtgtacctcagaatggctttcggacatttgtatgaggcctttcacgcaaatcctgggacgataactggatcagctgtggggtgcaaccctgacacattctggagtaagctgccaattttgctccctggttcactctttgcttttgactactcaggttatgatgccagtcttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaggaggcaatttcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccgattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataagtctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcgcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagctttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU936123.1_Enterovirus_A71_strain_SHAPHC5271/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgtaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc-------cccc-t------at-t-gtaatttagaag--------------cacta-aaccac-gatcaa-tagcaggcataacgctccagttatgtctcga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaagcc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagcctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcagcagagcaatcatt-----taccta----tttgtt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-actcttaattatatcttgacccttaacacagccaaa-----catgggttcgcaagtgtctactcagcgctccggttctcacgagaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctacgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgaccgagtggcgcaattgactataggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttacggcgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaactgtgggagaaat------------------cgtccaagggatggtactggaagttcacggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccggtcaggattctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactactagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggcacagggacgg------aagatacccaccccccttacaagcagactcaacccggtgccgatggcttcgagctgcagcacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacatcagtggatcaatttgaggactaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcactgcaattttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggctccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagttaaaacctggcacgaatcaatttttaactaccgatgatggcgtttcagcacctattctaccaaactttcaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttgtgccaagtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagccta------atggagagactgcgcttcccggtctcagcgcaagcag------ggaagggtgaactgtgtgcagtgtttagagccgatcctgggcgaaatggaccatggcaatccactttactgggtcagttgtgcgggtactacacccaatggtcaggatcgttggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgcttatagcctatacaccgccaggaggtcctctgcccaaagaccgggcgaccgccatgctaggcacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgttcgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcctgcaaacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccggca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcctcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaacggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtagagctattcacctacatgcgctttgatgcagagttcacctttgttgcgtgcacacctactggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccccaagccagattccagggaatcccttgcatggcaaaccgccactaacccctcagtttttgttaagttgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacgttcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcatggatacctcgcccgatgcgtaaccagaactatctattcaaagctaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaccagtctggggctatttatgtgggcaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaagtctcgtttgggaggacagctctcgcgacttgctcgtgtcatccaccaccgctcaaggttgtgacacgattgctcgttgtgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccggtcagtttttcaaaacccagcctgatttatgtagaggctagtgagtattacccggccaggtaccaatcacatcttatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcattggcatagtgtctactggtggtaatgggctcgttggctttgcagacgttagagatctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgactacgacatggtcaccctcactgcaaccttagcactgataggttgccatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtctccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaaatcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgttatacgctacggaagctaaaagagtctatgccctggagaagagaatgaacaactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgttatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtaggctggatgcagggcgtgctgctaaactgtgttctgaaaacaacactgcaaatttcaaacgttgcagcccactagtgtgtgggaaagctatccaactcagagatagaaagtccaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatc---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtacgccagtactgc-agggatcaaggctggattattcctgaaactcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcagtccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgctcaagaagcctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctctctactaagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggcaagactatttggattgagcacaaactcgtgaatgtccttgatgcagttgaactggtggacgagcaaggagttaacctggaactgaccctcgtcactcttgataccaacgaaaagtttagggatatcaccaaatttatcccagaaaatattagcactgctagtgatgccactctagtgatcaacacggagcacatgccatcaatgttcgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatccgttgggaaggttgtcggtattcacattggtggcaacggcagacaaggtttttgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagtccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtatttcacgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagatccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggcactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgctctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgacaaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgagactttccacgcaaatcctgggacgataactggatctgccgtggggtgtaaccctgatacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagcccagtctggttcagagcattagaattggttcttagagagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacaccatgtgtatcgtaataggacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcgttgatttggacgaactcaatatggttgcttatggagatgatgtgctcgctagttatcccttcccaattgattgttcggaactagctaagactggtaaggagtatggtcttaccatgactcctgctgataaatctccttgctttaacgaggtcaattggggtaatgcgactttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtgggaagagcgttggctattccaaactatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatgc-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ632497.1_Enterovirus_A71_strain_wenzhou011_polyprotein_gene_complete_cds
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacaactaaa-----catgggttcgcaagtgtctactcagcgctccggttctcacgagaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctacgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaaccctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagcgaccgagtagcgcaattaactataggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaacgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagaatatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgctgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaactgtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcactgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacgaatcaatttttaaccaccgatgatggcgtttcagcacctattctgccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------cgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgaactgtgtgcagtatttagagccgatcctgggcgaaatgggccatggcaatccactttactggggcagttgtgcgggtactacacccaatggtcaggttcgttggaagtcaccttcatgttcactggatcctttatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaagaccgggcgaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgttcgactactacaccacaggattagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcctgcaaacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcttcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagctcctaagccagattccagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaagagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacttccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactatctattcaaagccaacccaaattatgctggcaa----cgccattaagccaactggtgccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgctcaaggttgtgacacgatagctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaagcccagcctgatttatgtagaggctagcgagtattacccagccaggtaccaatcacatcttatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcattggcatagtgtctactggtggtaatgggctcgttggctttgcagacgttagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgattagaagtgattacgacatggtcaccctcactgcaaccttagcgctgataggttgtcatggtagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaaacagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgtca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgctacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaaatctctagccactggtattattgctcgagcaatcgctgataagtaccactccagtgtgtactcgctcccaccagatccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagacctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaaacaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcgtcactcttgataccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctactcatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggattttgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaactcgcaccaagttagaacctagtgtattccacgatatattcgagggaaataaagaaccagctgtcttgcacagtaaagatccccgacttgaggtagatttcgaacaggccctgttctctaagtatgtgggaaacacattacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctatcgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcagaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagctgcgctcgattgacaaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgagactttccacgcaaatcctgggacgataactggatctgccgtggggtgtaaccctgatacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagagagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcacgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggacgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggggtatggtctgaccatgactcctgctgataaatctccttgcttcaatgaggtcaattggggtaatgtgaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acgc---------------ctcaaccc-caccaga--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX986739.1_Human_enterovirus_71_isolate_Wuhan1143/HuB/CHN/2011_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggcacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---acctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccagccgg--tgtgcaacagagcaatcatt-----tactta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----tatgggttcgcaagtgtctactcagcgctccggttctcacgagaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctacgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagcgaccgagtggcgcaattaactataggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcactgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggctccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacgaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgaactgtgtgcagtatttagagccgatcctgggcgaaatggaccatggcaatccactttactgggtcagttgtgcgggtactacacccaatggtcaggatcgttggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaagaccgggcgaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgttcgactactacaccacaggattagtcagtatatggtatcagacaaattacgtggttccaatcggtgcacccaacacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcctgcaaacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaagcaaggttccagcactccaagctgctgaaattggagcatcttcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccacccttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagttgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactatctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgctcaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatttatgtagaggctagcgagtattacccagccaggtaccaatcacatcttatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcattggcatagtgtctactggtggtaatgggctcgttggctttgcagacgttagagacctcttgtggttagatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggtcaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgctgcggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtattcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaggtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcgacaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcacttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcgtcactcttgataccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgtaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccacgatatcttcgagggaaataaagaaccagctgtcttgcacagtaaagatccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgccttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC570452.1_Human_enterovirus_71_strain_SH12-036_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc--tc---cccc-t------at-t-gtaatttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtctcga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgctggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcgatcatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-actcttaattacatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctactcagcgctccggttctcacgagaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctacgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagcgaccgagtggcgcaattgactataggtaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggcacagggacgg------aagatactcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtacttgatgctggcatcccaatatcacagttaacagtgtgcccacatcagtggatcaatttgaggactaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcactgcaattttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataaccattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagttaaaacctggcacgaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaagtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagccta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcagtatttagagccgatcctgggcgaaatggaccatggcaatccactttgctgggtcagttgtgcgggtactacacccaatggtcaggatcgttggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgcttatagcctatacaccgccaggaggtcctctgcccaaagaccgggcgaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgttcgattactacaccacaggattagtcagcatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcctgcaaacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcctcaaatgctagtgacgagagcatgattgagacacgttgtgttcttaactcgcacagcacggctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctactggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatcccttgcatggcaaaccgccactaacccctcagtttttgttaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtaagggcgtggatacctcgcccgatgcgtaaccagaactatctattcaaagctaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgctcaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatttatgtagaggctagtgagtattacccagccaggtaccaatcacatcttatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcattggcatagtgtctactggtggtaatgggctcgttggctttgcagacgttagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggtcaccctcactgcaaccttagcactgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaaatcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgctacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaactcagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatc---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactaagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggagttaaccctcgtcactcttgataccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccactctagtgatcaacacggagcacatgccatcgatgtttgtcccggtgggtgacgttgtgcactatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaacggcagacaaggtttttgtgcaggcctcaaaagaagttactttgctagtgaacaaggagagatccagtgggttaagtccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtatttcacgacatcttcgagggaaataaagagccagccgtcttgcacagtaaagatccccgacttgaggtagactttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacttctcaaatgagcatggaggaggcctgctacggcactgagaatcttgaggctatcgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgacaaaatcaagaaagggaagtctcgtctgattgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgagactttccacgcaaatcctgggacgataactggatctgccgtggggtgtaaccctgatacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagagagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggacgaactcaacatggttgcttatggagacgatgtgctcgctagttaccccttcccaattgattgcttggaactagctaagactggtaaggagtatggtcttaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtggggagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ806378.1_Human_enterovirus_71_strain_35/Jingdezhen/China/HFMD_Severe/2011_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---t---cccc-t------at-t-gtaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtctcga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctctacattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatattttgacccttaacacagctaaa-----catgggttcgcaagtgtctactcagcgctccggttctcacgagaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctacgccgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgaccgagtggcgcaattaactataggcaactccaccatcaccacgcaagaagcggctaacattatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcaggtttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagttgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcactgcaactttggcctgttggttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacgaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcagtgtttagagccgatcctgggcgaaatgggccatggcaatccactttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaagaccgggcgaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgttcgactactacaccacaggattagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcctgcagacaggcactatccagggagacagg--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagtcctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcaccgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcttcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttttgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtacggactgtggggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactatctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgcttgtgtcatccaccaccgctcaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactatccagtcagtttttcaaaaccctgcctgatctatgtagaggctagcgagtattacccagctaggtaccaatcacatcttatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgttggcatagtgtctactggtggtaatgggctcgttggctttgcagacgttagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaagcggtctcggagatgcttttgg-acaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccaccttaggtatccctatcgctcaaaaacagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccttggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaacgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgatattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaggctatccaacttagagatagaaagtctaaagtcaggtacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcagaccaatcaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatctataagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcgtcactcttgataccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggcttttgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttggaacctagtgtattccatgatgtcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacgtcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctatcgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcagaatgaagttctacatggacaagtatggtctcgatcttccttactccacttatgtcaaggacgagctgcgctcgattgacaaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgactcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgatacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagagagatagggtatggtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtggtatgccctcaggctgttcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggacgaactcaacatggttgcttatggggacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgcttcaatgaggtcaattggggtaatgcgaccttcctcaaaaggggcttcttgcccgacgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccggtaggaagagcattggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagga---aatctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ632499.1_Enterovirus_A71_strain_wenzhou227_polyprotein_gene_complete_cds
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcatt-----taccta----tttatt-ggtttcgtaccat-----taacttt--------------gaattctgtgacc-actctaaattatatcttgaccctcaacacagttaaa-----catgggttcgcaagtgtctactcagcgctccggttctcacgagaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctacgctgccacagcaggcaaacagagtctcaagcaggacccagacaagtttacaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaagcatgtgggtacagcgaccgagtggcgcaattgactataggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataagccaacgcgcccggacgtttcagtgaacaggttttacacattggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttggacaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacag------aagacacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttacaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtatgcccacatcagtggatcaatttgaggactaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcactgcaactttggcctgttagttgtgcctattagcccattagactacgaccaaggagcgacgccagtaatccctataactattacactggccccaatgtgttctgaattcgcaggtcttaggcaagcagtcacgcaagggttccccaccgagttaaaacctggcacgaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagccta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggcgaactgtgtgcagtatttagagccgatcctgggcgaaatggaccatggcaatccactttactgggtcagttgtgcgggtactacacccaatggtcaggatcgttggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgcttatagcttatacaccgccaggaggtcctctgcccaaagaccgggcgaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgttcgactactacaccacaggattagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcctgcaaacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagtgtgagcagagccctcacccacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcctcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcacacagcacggctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaattgggacatagatataacaggttacgcgcaaatgcgtaggaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaaattgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatcccttgcatggcaaaccgccactaacccctcagtttttgttaagctgtcagaccctccagcgcaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaagagaaagatcttgagtacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacttccaagtccaagtaccccttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactatctattcaaagctaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatctggggctatttatgtgggcaacttcagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgctcaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaagcactacccagtcagtttttcaaaacccagcctgatttatatagaggctagtgagtattacccagccaggtaccaatcacatcttatgctcgcgcagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcattggcatagtgtctactggtggtaatggactcgttggctttgcagacgttagagatcttttgtggttggatgaagaagctatggaacagggcgtgtccgactacattaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaggctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggtcaccctcactgcaaccttagcactgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacctgaaacagctgcca-ctgctagagaatcagatttcaaatttggaacaatctgctgcctcacaagaggaccttgaaatcatgtttgggaatgtatcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgctacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtccctagccactggtataattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctctattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatc---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagagacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcacttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtcctcgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcgtcactcttgatatcaacgaaaagtttagggatatcaccaaattcatcccagaaagcattagcactgctagtgatgccaccctagtgatcaatacagagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaagttggaacctagtgtattccacgacatcttcgagggaaataaagagccagccgtcttgcacagtaaagatccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggcactgagaatcttgaggctatcgatcttcatactagtgcaggctacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgacaaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctgaatgattcagtgtacctcagaatggctttcggacatttgtatgagactttccacgcaaatcctgggacgataactggatctgctgtggggtgtaaccctgatacattctggagcaagctgccaattttgctccctggttcactctttgccttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagagagatagggtatggtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtggaatgccctcaggctgctcgggaacatccattttcaactcaatgattaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggacgaactcaacatggttgcatatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaagagtatggtcttactatgactcctgctgataaatctccttgctttaatgaggtcaattggggcaatgcgaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggactaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtgggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atct-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ004554.1_Enterovirus_A71_isolate_EV71/Hun12-14/2012_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---t---cccc-t------at-t-gtaatttagaag--------------cggca-aaccac-gatcaa-tagcaggcataacgctccagttatgtctcga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgtaacagagcaatcatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgactcttaacacagctaaa-----catgggatcgcaagtgtctactcagcgctccggttctcacgagaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctacgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcgtgtgggtacagcgatcgagtggcgcaattaactataggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaaggggtggtattggaagttcccggatgtgttaactgaaactggggtctttgggcaaaatgcacaatttcactacctttaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagacacccaccccccttacaagcagacccaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcactgcaactttggcctgttagttgtgcctattagcccgctagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctgaaacccggcacgaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaggttaggaacttgctagagttatgccaggtggagaccattctggaggtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccagtctcagcacaggcag------ggaagggtgaactgtgtgcagtgtttagagccgatcctgggcgaaatgggccatggcaatccactttactgggtcagttgtgcgggtactacacccaatggtcagggtcgttggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaagaccgggcgaccgccatgttgggcacgcacgttatttgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacacgcccgagatggagtgttcgactactacaccacaggattagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtagcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcttcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcggggttagttggagaaatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggcaagttgttccgcaattgctccaatatatgtttgtgccacctggagcccctaaaccagattcaagggaatctcttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatctcgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactatctattcaaagccaatccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgctcaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctggtttatgtagaggctagcgagtattacccagccaggtaccaatcacatcttatgctcgcacagggtcactcagaacctggtgattgtggtggtatccttagatgccaacatggcgtcgttggcatagtgtctactggtggtaatgggctcgttggctttgcagacgttagagatctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctctagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactgatctctgcactggtgattgtgatcagaagtgattacgacatggtcactctcactgcaaccttagcgctgataggttgccatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaagggattagagtgggtttccaacaagatcggcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataatttaaaacagctgcca-ctgctagagaatcagatctcaaacttggagcaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagac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>JN864018.1_Human_enterovirus_71_strain_EV71/Ningbo.CHN/001/2010_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcga-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaaccca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaacgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttattgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctcaactcacacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagatagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagtagttgagaaaattctgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattatgacatggttaccctcactgcgaccttagcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagactttattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaggcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaatccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgccttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JN256059.1_Human_enterovirus_71_strain_G288-927F/HeN/CHN/2009_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aatcac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcgattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataagccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtacagtgcaatgccagtaaattccatcaaggagcactcctagtcgccgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatag---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttaagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggagcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggtgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtcttattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagctccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agagatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaacagagcggtgcttgtcatgcaatctatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaacaaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggatgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggccttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JF820313.1_Human_enterovirus_71_strain_LCH02_polyprotein_gene_complete_cds
----------------------------------------------------------------------------------------------------------------------------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcagctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggacgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtacaatgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcactgcaactttggcctgttagttgtgcctattagcccgctagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccgaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgttagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccactttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgactgccatgctgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcatgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgtacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgttagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttggcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttataagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtttaaagtcaggtacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcattttactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgttcttgatgcagttgaactggtggatgaacaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagtacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcctgcatagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaacacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcgggcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtgggatgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaacacaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcgaccc-caccagaa----atctggt------c-g-----tgaatgt-g-ac------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ694985.1_Human_enterovirus_71_strain_MZ2008_polyprotein_gene_complete_cds
------------------taaaac--aag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactttggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-t------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtccacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaatatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggatgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagctgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctatatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggcaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacactcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccggaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaattatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcggaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggcttttggccgcgcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacataaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagagcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-tacca-a-a-aaaaaaaaaaaa-----------------------------------------------------------------------------agtaaacc----agga------------------accaaaa-------------------------------------------------------------tgcaaa----------actatagtgaa---catggg---
>GU198367.1_Human_enterovirus_71_isolate_FY08-C30-P2_complete_genome
------------------------------------------------------------------t-gggcgc-agcactctggtacctcggtacctttgtgcgcct-g-ttttata------accc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacactccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcttagtcgctgtcctaccagagtatgtcatcgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtacttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgagcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgggatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtagcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaaaccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgaagcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggggcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccagggccatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcggctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccctactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtatctcagaatggttttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgccttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacatcattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-tacca-g-a---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ514785.1_Human_enterovirus_71_isolate_BC08_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtga-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattagattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagccaaa-----catgggctcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctgtgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggaaaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcaggattctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggcacggggacgg------aagatactcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaatgcactgccttttgactctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgcccatagcctatacaccgccaggaggtcctctgcccaaggatcgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaattgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagtttacctttgttgcgtgcacacccaccgggcaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggtacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgatatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggattaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaatttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccaccggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagattcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagagaatacagcaataggtccgccattggcaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggaccgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttggagcctagtgtattccatgacatcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtaccgagaatcttgaggctattgatctccacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcacttattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgactatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcctgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttacac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC436269.1_Enterovirus_A71_isolate_V08-2221581_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactttggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagctactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaggacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagttggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaatttcactacctctaccgatcagggttctgtatccacgtgcagtgcaatgccagtaaattccatcaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatactcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgaccagggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtatttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggtcccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggtcagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgacagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggatatagatataacaggatacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccagtatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatctggggccatttatgtgggcaactttagagtggtcaaccgacaccttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcacctggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgtcagagatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaactaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccttggggataaagaaaagagacatcttagaccctaccactagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggcttttggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtatggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaacttaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctaaccatgactcctgctgataagtctccttgctttaatgaggttaattggagtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ517316.1_Human_enterovirus_71_strain_Kaifeng/2010_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtatctcggtacctttgtgcgcct-g-tttttat------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccag--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttttgcatccacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcagctttggcctattagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccgaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgttagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcacccacgctctaccggca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttggatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggtaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaattatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcgaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgctgggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctatggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagcttcgctcgattgataaaattaagaaagggaagtcccgtctgattgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataagtctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctaccatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgtctcctagcatggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JF894381.1_Human_enterovirus_71_strain_MP9-1_complete_genome
------------------taaaac--aag-cct-gtgggttg-c-acccacttaca-gggcccac-t-gggggcaagccctttggcacctcggtacctttggtcgcct-g-tttttat------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaatatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggttctggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggatgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaactgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttggttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccgaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgttagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttctat--------------------------aggagatagcgtgagtagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggcaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtctaactaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcgaagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagtttaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatatagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggttccaaggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcaccactagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggggagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaggaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggctcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtacggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgagcagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgtata-caaaa-a-a-aaaaaaaaaaaa-------------------------------------------------------------------------------ttaaac----gggg------------------accacag-------------------------------------------------------------agtccc----------ccctttgtggggcccttgggg--
>JQ074190.1_Human_enterovirus_71_strain_EV71/Jinan1006_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgtcatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtcaactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gtggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttcccacgaaaattcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactatcggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttacggtgagtggccttcctactgctcagattccgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggttttcgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccatgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacggtgtgcccacaccagtggattaatttgaggaccaacaattgtgccacaataatagtaccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccccataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagttacgcaagggttccccaccgagttaaaacctggcacaaatcaatttttaaccaccgatgatggtgtttcagcacctattctaccaaacttccatcccaccccgtgtatccacatacctggtgaagttaggaacttgttagagttatgccaggtggagaccattctggaggttaataa----------tgtgcccacgaatgccactagttta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctatgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactataccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgacattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgcgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctctcgagggcacaac-taacccaaatggttatgccaactgggatatagacataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccaccaacccctcagtttttgtcaagttgtcagaccctccagcacaggtttcagtgccattcatgtcacccgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagaccttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaacttcagagtggtcaaccgacatcttgccactcacaatgattgggcaaatctagtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtttgtttttcaaagcccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcgcatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgttggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttgtagggtctgaaggagcagttgagaaaattttgaaaaatctcattaaactaatctctgcactggtgattgtgatcagaagcgattacgacatggttaccctcactgcgaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaagacagcctccatcttaggtatccctatcgctcaaaaacagagcgcttcctggctcaagaagttcaatgacatggccaatgccgctaaggggttagagtgggtatccaacaagatcagcaaatttattgattggcttaaggataaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggttcaccaggcactgggaagtctctagccactggtattattgcccgagcaatcgctgataagtaccactccagcgtgtactcactcccaccagacccggatcattttgacggttacaagcaacaggtggtcacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctatatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagctgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagtccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagcgtggatacggtggtttcagaacttatcagggaatatagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccggacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctataagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaagactatttgggttgagcacaaactcgtgaacgtccttgatgcggttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgataccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagtactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgcggaggagtggtgacatctgttgggaaggttgtcggtatccacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaagaagttactttgctagcgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaagtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctatcgatcttcacactagtgcaggttacccctacagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgttagtagaatgaagttctacatggacaagtatggtctcgatcttccctactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtaccttagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctactgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggccgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgccgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtgggaagagcattggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX986737.1_Human_enterovirus_71_isolate_Wuhan1042/HuB/CHN/2011_complete_genome
------------------taaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-t------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtattggaagttcccggatgtattaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagcgtatgtcattgggacagtggcaggtggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgccacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactaggtcagttgtgcgggtactacacccaatggtcaggatcgttggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcacccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagacagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttaagggcacaac-taacccaaatggttacgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacgcccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaaaccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaagggtttagagtgggtttccaacaagatcagcaaatttgttgattggcttaaggagaagatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagttatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccatggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtgtgtcttattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtatggatatgtctttattctgtcaaatggtatccactgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggacgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggcccacccaagttcaggccaattaggatt---agccatgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccactaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagcgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgacttcgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagttaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcattccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgatgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttggggaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaagaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaacttgaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgaccttccctactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtatctcagaatggctttcggacatttgtatgaggttttccacgcaaatcctgggacgataactggatcggccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagtcttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaagaggcaatctcactcattgaggggatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcaggaacatccattttcaacacaatgatcaacaacatcattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccgattgactgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF826491.1_Enterovirus_A71_strain_TZ06_polyprotein_gene_complete_cds
------------------ataaag--ccc--tt-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------caaca-agccac-gatcag-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctactccggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgggctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactataaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccagatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtatagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttagaaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccatactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggtcccttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttaccctcgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgtaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagccatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggcaagtcgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgacagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcccaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattacgctggcga----ctccattaaaccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtccggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccaggcaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtcgactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgaagcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttactctcactgcaaccttagcgctgataggttgtcatggcagtccttggtcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagagggccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcatattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaagttcatcccagaaaatattagcactgctagcgatgccaccctagtgatcaatacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcagagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgaccatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctacgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtttaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggttttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgccttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaacacaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtgggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcc-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP266572.1_Enterovirus_A71_strain_2008-43-16_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaaa---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttgtatcggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacatagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctacgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtctcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagacactcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataactgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacaccagtgatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctggagttatgtcaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctacacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagcatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagcg--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggactagttggagagatagacctccctcttaagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacttacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattactccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccatttatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaacgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagaccttttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagagctatcttatagggtctgaaggagcagttgagaaaattttaaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaagggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggagcaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccttggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtatactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaataacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatatagcaataggtccgccattggcaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtatatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcactaagttagaacctagtgtattccatgacattttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctatcaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgattaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattgggataatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcacaatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggccatcccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ804832.1_Human_enterovirus_71_strain_EV71/Hubei-XF/CHN/2010_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcactcctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---acctttatattggctgcttatggtgacagttaaa-------gaattgttgccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcctgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctactataaactacaccactattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcgtgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaatatcatagtcggttatggcgaatggccttcctactgttcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcggggttctgcatccacgtacagtgcaatgccagtaaattccatcaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccctacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgctcgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaatgcactgccttttgattctgccttgaatcattgcaactttggtctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggtacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattatgtggttccaatcggtgcgcccaacacagcctatataatagcattagcggcagctcaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatag---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttaagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattcgagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcggtgccattcatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggggaacacaaacaggagaaagatcttgaatacggggcatgtcccaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggttaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgcttgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtgttacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggttttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactatatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaaaaactatcttataggctctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccaccggtattattgctcgagcaattgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttataagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtgtccactgtagacttcattccaccaatggcttctctcgaagagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagataggaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccgcccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctcctcgctagcgtagatagtgaagaagtacgccagtactgc-agggatcaaggttggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcagtccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggggtcaacctggaattaactctcatcactcttgacaccaacgagaagtttagggatatcaccaaatttatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccgtcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtataactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcaggcaaggtttttgcgcaggcctcaaaaggagttactttgctagcgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaatcaacacctctcaaatgagcatggaggaggcctgctacggcactgagaatcttgaggctattgatcttcatactagtgcaggttacccctacagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgcaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggtattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcgatccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttacac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ456307.1_Human_enterovirus_A_strain_GZ2010-120_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcctgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccaccg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagataagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggcgaatggccttcctactgctcagattctgacgctacagcagtggataaaccaacacgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaacgcacaattccactacctctaccgatcagggttctgcatccacgtacagtgcaatgccagtaaattccatcaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccacctcccttataagcagactcaacccggtgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccccataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaataa----------tgtgcccatgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagttgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtgataccatggatcagtaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcctaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccattcagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccaaaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctcaactcgcacagtacagctgagaccactcttgatagcttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagaactattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgttcgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctatcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacattctcagtgcggactgtggggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaggacagctctcgcgacttgcttgtgtcatccaccaccgcccaaggttgtgacacaattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaaaaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcattggtgattgtaatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaatttctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacagaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtaacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtctacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtacgccagtactgc-agggatcaaggttggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagttaacctggaattaactctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccagtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtataactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcaggcaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctacagtgccctagggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggtattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgagcagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ407557.1_Human_enterovirus_71_strain_LN009_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagcg-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgtccgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---acctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaactatattctgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgctacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaaccattggcaactccaccatcaccacgcaagaagcggccaacatcatagtcggttatggcgaatggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacaccaaattgtgggagaaat------------------cgtccaagggatggtattggaagttcccggatgtgttaactgaaactggagtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtacagtgcaacgccagtaaattccatcaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccgctagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttgaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtacccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcggtgtttagagccgaccctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgtgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattatgtggttccaattggtgcgcccaacacagcctatataatagcattagcggcagctcaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggtaccatccagggagatagg--------gtggcagatgtaatag---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgagattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcacacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taatccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaagtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgccactaacccctcagtttttgttaagctgtcagaccctccagcgcaggtttcggtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggggaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtctaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaatcagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccacttacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgcttgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaaaaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaaccttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggctcaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggcattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtagttacagtgatggatgatttgtgtcaaaaccccgatggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcctctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccgattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtacgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttatcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaactctcatcactcttgacaccaacgaaaagtttggggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtctcggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtataactttcctactaaagcggggcagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacaccagtgcaggttacccctacagtgccctggggataaagaagagagatatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtatctcagaatggctttcgggcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggtattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgactcctgctgacaaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgcccatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaattttagacgcaattggctcgaattatttt-----agaggttatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JN864020.1_Human_enterovirus_71_strain_EV71/Ningbo.CHN/069/2010_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactctggtatcttggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccgactagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atccttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgagatggcagcgccactgaagtccccatccgctgaagcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggctatggtgagtggccttcctactgctcagattctgacgctacagcagtggataagccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcgggcggtacagggacgg------aagatacccaccccccctacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggtatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtacctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggattagcaacactcactatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtaagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctaaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacgac-taacccaaatggttatgccaactgggacatagacataacaggttatgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtaccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagcgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgttggcatagtgtctactggtggcaatgggctcgttggctttgcagacgttagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgattacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgactacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgagttcctaaataacttgaaacagctgcca-ctgctagagaatcagatttcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgacaagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtgtccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacttctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctcctcgccagcgtagatagtgaagaagtgcgtcagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcacgtgcttaagaaacctgctcttcgcacggcaagagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggacgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcccactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggtagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaaccaattaaagcaactagagattaatacctctcaaatgagcatggaggaggcctgttacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtctcgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatctgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggtccttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtaccgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattgggctaatgcgaccttcctcaaaaggggctttctgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcattggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JN864019.1_Human_enterovirus_71_strain_EV71/Ningbo.CHN/002/2010_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------taaca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtagcaccatgaaagttgcggagggcttcgttcagca--ccc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatctcgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcgattactacaaagactcctatgctgccacagcaggcaaacaaagtctcaagcaggatccagacaagtttgcaaatcctgttaatgacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------catccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagttgctatcctaccagagtatgtcattgggacagtagcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgtaactttggcctgttagttgtgcctattagtccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttactagagttatgccaggtggagaccattctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactaggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacacgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggtaccatccagggggatagg--------gtcgcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctgccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcggagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatctcgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtatcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtattactgtaactcgatgagaaaacactatccagtcaggttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattctgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgccaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactggaaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacggtgatggatgatttgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaacttcaaacgctgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagtttaggccaatcaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccaatactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagcctcgactttgctctttccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttgggttgagcacaaactcgtgaacatccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatgggccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggcgctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcagctagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcaattgataaaattaaaaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattctgctccctggttcactatttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcgatccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-taccagaa----atctggt------c-g-----cgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF668443.1_Enterovirus_A71_isolate_H3-TY_complete_genome
-----------------attaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcgagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcctatgctgccacagcaggcaaacagagtctcacgcaggatccagacaagtttgcaaatcctgttaaagacatctacactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccactatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaaattcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggtacagggacgg------aggatacccaccccccctacatgcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacatcaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagttacgcaagggttccccaccgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttctaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcagcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccggaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctcccccctaagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaaattgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctaaggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ttccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagagcctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattctgaaaaatcttactaaactaatctctgcactggtgattgtgatcaggagtgattacgacatggttaccctcactgcgaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaatttctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaacaactatatgcagtttaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgccattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccatcggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaagcctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttgggttgagcacaaactcgtgaacgtcctcgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactctcgacaccaacgaaaagtttagggacatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggtcaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagtcagaacctagtgtattccacgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacactctacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcacggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacgagtatggtcttgatctcccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtttgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcgggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaacctcactcattgaggggatcaaccacacacatcatgtgtatcgtaataaggcctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtgaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatacgagaagtttgtgagcacaattaggtctgtcccagtaggtagagcgttggctatcccaagttatgaaaatcttagacgcaaatggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aa---------------------------------------------------------------------------------------------------------
>HQ891929.1_Human_enterovirus_71_strain_Shanghai_118-2009_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcctga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taaccct--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggcctccctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggacgtgttaactgaaactggggtttttgggcaaaatgcacaataccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccctggacgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttaggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacacccattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctcaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccccccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcgtgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcatggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggtaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgactgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggcatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaggaggaccttgaagttatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtattcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaataacatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggcctattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaattcagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccgtcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggggtggtgacatctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacattttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagccagacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattgatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttatccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgtcctcaggctgttcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctaaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgatccaccccactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtcattgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JN864021.1_Human_enterovirus_71_strain_EV71/Ningbo.CHN/076/2009_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---atctttaaattggttgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaagatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggccaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacacgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcgggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacgaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagccta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccctgggcgaagtggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccaaggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcacacacgctctaccagca--------cccacaggccagaacacacaagtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattggttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaactgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctatcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaagagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtattactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtggaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactaccttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgactacgatatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ttgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagccaaaagggtctatgccctggagaagagaatgaacaactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtcactagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagac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>JN864022.1_Human_enterovirus_71_strain_EV71/Ningbo.CHN/087/2009_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactctggtatcttggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aacctc-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatggaagttgcggagagctccgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgcttcc--tttt---atctttacattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----caacttt--------------gaattctgtgacc-acccttaattatatcctgacccttaacacagctaaa-----catgggttcgcaagcgtctacacagcgctccggttcccacggaaattcaaactcagccactg-agggttctaccataaactacaccactatcaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaaaacatcttcactgaaatggcagcgccactgaaatccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccactatcaccacgcaagaagcggctaacatcatagtcggttatggcgaatggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtacagtgcaatgccagtaaattccatcaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttataaacagactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatctaaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaaccaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcggtgtttagagccgatcctgggcgaagtggaccatggcaatccaccttactgggccagttgtgcgggtactacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggggtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattatgtggttccaatcggtgcgcccaacacagcctatataatagcattagcggcagctcaaaagaacttcactatgaaattgtgcaaggatgctagtgacatcctacagacgggcaccatccagggagatagg--------gtggcagatgtaatag---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaaatgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaactgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggggaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgcttgtgtcgtccaccaccgcccaaggttgtgacacgattgctcgctgcgattgccagacaggggtgtactactgtaattcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaaaaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcggccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaagaggatcttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaattgctgataagtaccactccagcgtgtactcgcttccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtacgccagtactgc-agggaccaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtacgtcatctacaagctctttgcagggtttcaaggtgcgtattctggtgctcctaagcaagtgcttaggaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaactctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgacgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggagggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgccagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggacctacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctacagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacgtccattttcaactcaatgatcaataacattattatcagagcactgctcgtaaaaacatttaagggcattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatccctacccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccagggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JN864023.1_Human_enterovirus_71_strain_EV71/Ningbo.CHN/103/2009_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactctggtatcttggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------gg-t-gaaacttagaag--------------cagca-aacctc-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggattgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatggaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccccgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattacatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttcccacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagattcctatgctgccacagcaggcaaacagagcctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttacggcgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggacgtttcagtgaataggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccatcccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtatgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaacttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcttgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccgccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaactttcaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgtcaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccagtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccctactgggtcagttgtgcgggtactacacccaatggtcagggtcgttggaagtcaccttcatgtttactgggtccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggatcgggcgaccgccatgttgggcacacacgtcatctgggactttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatag---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttaygccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaaatgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaactgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggggaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggagctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgctcgctgcaattgccagacaggggtgtactactgtaattcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcatcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaaaaattatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagcccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggctcaaggagaaaatagtaccagcggccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaagaggatcttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaattgctgataagtaccactccagcgtgtactcgcttccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggcaaggatatgtctttattttgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtacgccagtactgc-agggaccaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtacgtcatctacaagctctttgcagggtttcaaggtgcgtattctggtgctcctaagcaagtgcttaggaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaactctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgacgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggagggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggacctacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctacagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatctattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctaaccatgactcctgctgacaaatctccttgctttaatgaggtcaattggggtaatgcgactttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgccttctagcatggcataatggtaaacaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ891925.1_Human_enterovirus_71_strain_Shanghai_36-2009_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-acctactcaca-gggcctac-t-gggcgcaagcactctggtatctcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggccaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttagttatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggctctaccgtaaactacaccaccatcaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggcctttctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggacgtgttaactgaaactggggtttttgggcaaaatgcacaataccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctggacgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttaggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacacccattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttctat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacgcaggtgagtagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagtatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctcaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggggaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgcttgtgtcatccaccaccgcccaaggttgtgacacaattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaaaaactatcttatagggtctgaaggggcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtatactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtgaggatatgtctttattctgccaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtgccaacagtgtctgactctgacgcaattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggaagcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagttagatacagtgtggatacggtagtttcagaacttattagggaatacagcaatagatccgccattggcaatacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaacccccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgttatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacggcaacagtacagggcccaagccttgattttgctctctccctactgagaaggaacgtcaggcaagtccaaacagaccaagggcatttcaccatgttaggagttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatattaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcatattggtggcaatggcagacaaggtttttgcgcaggtctcaaaaggagttactttgccagtgaacaaggagagatccagtgggttaagtccaataaagaaactggaagactcaacattaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtagccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaatacaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggcttttctcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaatactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttacac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC436272.1_Enterovirus_A71_isolate_V10-2234054_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatctcggtacctttgtgcgcct-g-ttttata-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aactac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----ttcatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctgcacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcttatgctgccacagcaggcaagcagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcatcgggacagtggctggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgtcgatggctttgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcgcagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgctctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccactgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacaaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgctatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggctagtcagtatatggtatcagacaaattacgtggttccaatcggcgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgacatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaagttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaacagccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaatcagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatctcgtttgggaagacagctctcgcgacttgcttgtgtcatctaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtggaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgactgcggtggtatcctcagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgattacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgccaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccggcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcatatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagccaaaagagtctatgccctggagaagagaatgaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccgggcactgggaagtctctagccactagtattattgctcgagcaatcgctgataagtaccattccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttgttctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtctccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgctgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagttagatacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtctgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgacctccttgctagcgtagatagtgaagaagtgcgccagtactgt-agggatcaaggctggatcattcctgaagctcccaccaatgtagagcggcaccttaacagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgattttgctctctccctactaagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagtactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtataactttcctactaaagcaggacagtgtgggggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagacttaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgagatagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaacacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttttacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaaatcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaatcctgatacattctggagcaagctgccaattttgctccctggttcactttttgcctttgactactcaggttatgatgccagtcttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttccttaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaggaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttacac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ891926.1_Human_enterovirus_71_strain_Shanghai_51-2009_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacctagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaggttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttcccaacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcatt-----taccta----tttattgggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttagttatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactataccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactggagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggccaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggtttcacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaccagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacgaatcaatttttaaccaccgatgatggcgtttcagcgcctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttagaaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgctactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcactttcatgtttactggatccttcatggccaccggcaagatgcttatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagttagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcatcatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgattggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgacagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtagagctattcacttacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaactgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagcttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggttatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggtaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgaggaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcatcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcctaaaaaatcttattaaactaatctctgcactggtgattgtgattagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggcatccctatcgctcaaaagcagagcgcttcctggcttaagaagttcaatgacatggccaacgccgctaaggggtttgagtgggtttctaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccactatacgccacggaggctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactggaaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggaccattttgacggttacaagcaacaggtggttacagtgatggatgatctgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtggacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaggtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacataacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacggcaataggtccgccattggcaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagtgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcccgaagctcccaccaatgtagagcggcacctcaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtttcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcagacaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgtcactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgataccaacgaagagtttagggatattaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggtctcaaaaggagttactttgccagtgaacaaggagagatccagtgggttaagtccaataaagaaactggaagactcaacattaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatctcccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattctgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacttattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaattcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagaccggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccaataggaagagcattggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttacac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-accg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ456308.1_Human_enterovirus_A_strain_GZ2010-118_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgatccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctctggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcattgtcggttatggtgagtggccttcctattgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtctaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccggtcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgttattgggacagtggcaggcggtacagggacgg------aagacacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggggcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacacaagggttccctaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtctcagcacctattctaccaaacttccaccccactccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtatttagagccgatcctgggcgagatggaccatggcaatccaccttactgggtcagttgtgcggatactacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggccaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattacagagcacatgcccgagatggagtgtttgactactacactacaggattagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaatttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagccctcacacacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggccggattagttggagagatagatctccctcttgagggcacaac-taacccgaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatctcttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaagtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacactattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagttagtttttcaaagcccagcctggtctatgtagaagctagcgagtattacccagccaggtatcaatcacatctcatgctcgcgcagggtcactcagaacctggtgattgcggtggtatcctcagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacattaag-ggtctcggagacgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaagatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcactgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggcatccctatcgcccaaaagcagagcgcttcctggctcaagaagttcaatgatatggccaacgccgctaaagggctagagtgggtttccaacaagatcagcaaatttattgattggcttaaggaaaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctacca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctggctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgacaagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaaatttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactatgctctgaaaacaacaccgcaaatttcaaacgttgcagcccattggtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggtaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaggaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtacgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaagctcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaactctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagtactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctactcatcgcaccatgatgtataactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttattggtattcacattggtggcaatggcaggcaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccacgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgagcaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctacagtgccctggggataaagaagagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgaactgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtttaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgaggggatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcggggacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggacgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggaatatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaaacaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttagctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ746494.1_Enterovirus_A71_strain_306B_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcgagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---tccc-c------ag-t-gaaacttagaag--------------caaca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----tactta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgcgacc-accctcaattatatcttaacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcgaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaaatttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagcgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggcgtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatactcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatctgaggaccaacaattgcgctacaataatagtgccatacattaacgcactaccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccactgatgatggcgtctcagcacctattctaccaaacttctaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttctgccaagtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagaggctgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgtaatggaccgtggcaatccaccttactgggccagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcttatacaccaccaggaggccctctgcccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccgtggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacggggttagtcagtatatggtatcagacaaattacgtggttccaatcggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggacgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtaagcagagctctcactcacgctctaccagca--------cccacaggacagaacacacaggtgagcagtcatcgactggatacaggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagtagagcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgacgcagagttcacttttgttgcatgcacacccacagggggagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacatcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggtaa----ctccattaagccaactggtgccagtcgcacagctat---caccac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaagtcttgtttgggaagacagctctcgcgacttgctcgtgtcatctaccaccgcccaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccggccaggtaccagtcacatctcatgctcgcacagggtcactcagagcctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgcttttgggacaggcttcactgacgcagtatcaagggaggttgaggctctcaagaactatcttataggatctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaatttggaacaatctgctgcctcacaagaggaccttgaagtcatgttcgggaatgtgtcgtacctagccca---------cttttgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatgtgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagatttcattccaccaatggcttctctagaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaacgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgtcgcaggttccacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctagactatgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaaatcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcagtacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaaactcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggtccgagccttgactttgctctctccctactaagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgaacaaggagtcaacttagaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacagagcacatgccatcaatgtttgtcccggtgggtgacgttgtacagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggggtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccacgatgttttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattgatacctctcaaatgagcatggaggaggcctgctacggtactgagaatctcgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctaccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaaggggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggcgggatgccctcaggctgttcgggaacatccattttcaattcaatgatcaacaacattattatcagagcactgctcataaagacatttaagggcattgatttggatgaactcaacatggtcgcttatggtgacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggcaaggagtatggtctgaccatgactcctgctgataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagttcccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctggcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgatggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------a----------------------------------------------------------------------------------------------------------
>HM053670.1_Human_enterovirus_71_strain_BJ393_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcgagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---tccc-c------ag-t-gaaacttagaag--------------caaca-caccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggtcgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-accctcaattatatcttaacccttaacacagctaaa-----aatgggttcgcaagtgtctacacagcgctccggttcccacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccggacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaattccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcggtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatactcaccccccttacaagcagactcaacccggcgccgatggctttgagttgcaacacccatacgtgcttgatgctggcatcccaatatcacagttaacagtgtgtccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattccgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttctaaccactgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaagtggagaccattctggaggttaacaa----------tgtgtccacgaatgccactagttta------atggagaggctgcgcttcccggtctcagcacaagcag------ggaaaggtgagttgtgtgcggtgtttagagccgatcctgggcgtgatggaccgtggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggccctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacacccattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgccagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagtagagccctcactcacgctctaccagca--------cccacaggacagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacggctgagaccactcttgacagtttcttcagtagagcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacgtagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgtacacccaccggggaagttgtcccacaattactccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacccgcgagtgcttatcagtggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtatcctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggtaa----ctccattaagccaactggtgccagtcgcacagctat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtaggggctagcgagtattacccggccaggtaccagtcacatctcatgctcgcacagggtcactcagagcctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgttagggacctcttgtggttagatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttactctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcctcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagctgcca-ttgctagagaatcagatctcaaacttagaacaatccgctgcctcacaagaggaccttgaagtcatgttcgggaatgtgtcgtacctagccca---------cttttgtcgcaagttccaaccgctatacgccacggaagctagaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaaatctctagccactggtattattgctcgagcaatcgctgataaataccactccagcgtgtactcgctcccaccagacccagatcattttgatggttataagcaacaggtggtcacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagatttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagagctaggtagactggatgcagggcgagccgctagattgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagagcttattagggaatacagcaataggtccgccattggcaatacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagtgtagacagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaaactcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtggtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagagacctactcttcgcacagcaacagtacagggcccgagccttgacttcgctctctccccactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgacgcagttgaactggtggatgagcaaggagtcaacttggaattaaccctcatcactcttgacactaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgattaacacagagcacatgccatcaatgtttgtcccggtgggtgacgttgtacagtatggcttcttgaatctcagtggtaagcccactcatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggggtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaacaaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccacgatgttttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcttgctacggtactgagaatctcgaggctattgatcttcacactagtgcaggttacccctatagtgccttggggataaagaaaagagatatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaaatatggtcttgatcttccttattccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagcagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgagactttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctaccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaaggggcaatctcactcattgagggaattaaccacacacatcatgtgtatcgtaacaagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagggcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggcaaggagtatggtctgaccatgactcctgctgataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggccatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ360544.1_Human_enterovirus_71_isolate_GZ-08-01_complete_genome
------------------ttaaaa--cag--ct-gtgggttg-t-acccactcaca-gggcctac-t-gggcgcgagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---tccc-c------ag-t-gaaacttagaag--------------caaca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttgtt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-accctcaattatatcttaacccttaacacagccaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcgaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcgaacagagtctcaagcaggatccagacaaatttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttgactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatactcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccatacgtgcttgatgctggcatcccaatatcacagttaacagtgtgtccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactaccttttgattctgccttgaaccattgcaactttggcttattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccactgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaagtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagaggctgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgtaatggaccgtggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctctgcccaaggaccgggcgaccgccatgttgggtacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagacggagtgtttgactactataccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgtaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagtagagccctcactcacgctctaccagca--------cccacaggacagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcgtcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacggctgagaccactcttgatagtttcttcagtagagcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggtaa----ctccattaagccaactggtgccagtcgcacagctat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggttaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtggaggctagcgagtattacccggccaggtaccagtcacatctcatgctcgcacagggtcactcagagcctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaagaagctatggagcagggcgtgtccgactatatcaag-ggcctcggagatgcttttgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatccgctgcctcacaagaggaccttgaagtcatgttcgggaatgtgtcgtacctagccca---------cttttgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccattccagcgtgtactcgctcccaccagacccagatcattttgatggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagatttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctagactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtggaaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagtaataggtccgccattggcaatacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagacagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaaactcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgcgaacgtccttgacgcagttgaactggtggatgagcaaggagtcaacttggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacagagcacatgccatcaatgtttgtcccggtgggtgacgttgtacagtatggcttcttgaatctcagcggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggggtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatgttttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatctcgaggctatcgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctaccaattttgctccctggttctctctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaaggggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagagtatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ694982.1_Human_enterovirus_71_strain_JK2009_polyprotein_gene_complete_cds
------------------taaaaa--acg-cct-gtgggttg-c-cccccctccca-gggcccac-t-gggggcgagccctttggtaccttggtacctttgtgggcct-g-ttttacc------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttaacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcgaactcagctactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagccttaagcaggatccagacagatttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaagcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcagctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatactcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggtatcccaatatcacagttgacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccactgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagccg------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaagtggaccgtggcaatccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattagaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggccctctgcccaaggaccgggcgaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcagcactcattatagagcgcacgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgcggttccaatcggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacagggcagaacacacaggtgagtagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcgtcaaatgctagtgacgaaagcatgattgagacacgctgtgttctcaactcgcatagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttaaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccccaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacccgcgagtgcttatcaatggttttatgacgggtaccccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtctaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattgtgctggtaa----ctccattaagccaactggtgccagtcgcacagctat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaaccttgtttgggaagacagctctcgcgacttactcgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgtgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagttttacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccagcatggcgtcgtcggcataatgtctactggtggtaatgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaggaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctctagggaggttgaagctctcaagaactatcttatagggtctgaaggagcggttgagaaaattttaaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattatgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgttcgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacatcgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcacttcgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagattggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttatcagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggcccacccaagttcaggccaattaagatc---agccttgaagaaaaaccagccccagacgctattagcgatctccttgccagcgtagacagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaatgtagaacggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttgatgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcggtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtaaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacttggaattaaccctcatcactcttgacaccaacgaaaagttcagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacagagcacatgccatcaatgtttgtcccggtaggtgacgttgtacagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatgttttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgaacctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgctctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtctcgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggttttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagttgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattggaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaattaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgattaacaacattatcatcagagcactgctcataaaaacatttaagggcattgatttggatgagctcaacatggtcgcttatggagacgatgtgctcgctagttatcccttcccaattgattgcttggaactagcaaaaactggcaaggagtatggtctgaccatgactcctgctgataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccccactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-t-aca-a-a-aatataagcaaa-----------------------------------------------------------------------------agtaaaca----ggga------------------gccaaag-------------------------------------------------------------taggca----------aactttgtgaaccttatgacgat
>GQ994991.1_Human_enterovirus_71_strain_Chongqing3-09-China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcgagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcgattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttaacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcgaactcagctactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagccttaagcaggatccagacagatttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaagcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcagctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatactcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggtatcccaatatcacagttgacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccactgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaagtggagaccattttggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagaggctgcgcttcccggtctcagcacaagcgg------ggaaaggtgagctgtgtgcagtgtttagagccgatcctgggcgtaatggaccgtggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaggtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggccctctgcccaaggaccgggcgaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcacgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggacagaacacacaggtgagtagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcgtcaaatgctagtgacgaaagcatgattgagacacgctgtgttctcaactcgcatagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttaaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccccaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacccgcgagtgcttatcaatggttttatgacggataccccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtctaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggtaa----ctccattaagccaactggtgccagtcgcacagctat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaaccttgtttgggaagacagctctcgcgacttactcgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgtgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagttttacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccagcatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaggaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgcttttgggacaggcttcactgacgcagtctctagggaggttgaagctctcaagaactatcttatagggtctgaaggggcagttgagaaaattttaaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattatgacatggttaccctcgctgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatccgctgcctcacaagaggaccttgaagttatgttcgggaatgtgtcgtacctagccca---------cttttgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggtactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtatactcgctcccaccagacccagatcactttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagattggatgcagggcgagccgctagactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttatcagggaatacagcaataggtccgccattggcaatacaatcgaggctcttttccaaggcccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagacagtgaagaagtgcgtcagtactgc-agggatcaaggctggattattcctgaaactcccaccaatgtagaacggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcggtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtaaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacttggaattaaccctcatcactcttgacaccaacgaaaagttcagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacagagcacatgccatcaatgtttgtcccggtaggtgacgttgtacagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatgttttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgaacctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtctcgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggtcttcggacatttgtatgagactttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagttaccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattggaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaattaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgattaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaaaactggcaaggagtatggtctgaccatgactcctgctgataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggcttttcgcccgatgaacagtttccatttttgatccaccccactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-t-acc-c-g-aataac--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ004560.1_Enterovirus_A71_isolate_EV71/GD10-45/2010_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagctagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattacatcttgacccttaacacagctaag-----tatgggttcgcaagtgtccacacagcgctccggctctcacgaaaactcaaactcagccactg-agggttccactataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagcctcaagcaggatccagacaagtttgcaaaccctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaggaagcggctaacatcatagtcggttatggtgagtggccttcctactgttcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcttggtcgctgtcctaccggagtatgtcattggaacagtggcaggcggtacagggacgg------aagatactcaccccccttacaagcagactcaacccggtgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgtccacaccagtggattaatttgaggaccaacaattgtgccacaataatagtgccatacattaacgcactgccttttgattctgctttgaaccactgcaactttggcctgttggttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggcccctatgtgttctgaattcgcaggtcttaggcaggcagttacgcaagggtttcccaccgagctaaaacctggtacaaatcaatttttaaccactgatgatggcgtttcagcacctatactaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagactatcctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgtttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcggaatggaccgtggcaatccaccttactgggtcagttgtgtgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggccaccggcaagatgctcatagcctatacaccaccaggaggccctctgcccaaggaccgggcgactgccatgttgggcacgcacgtcatctgggattttgggctgcagtcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgctcgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcactatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctgccagca--------cctacaggccagaacacacaggtgagcagtcatcgactggacacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgacagtttcttcagcagagcgggattagttggagagatagacctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctatatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggcaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccccccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgagtatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtctaagtaccctttagtggttagaatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggttaatcgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacctgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgctgcgattgccagacaggggtgtactactgtaattcaaggagaaagcactacccagttagtttttcaaaacccagcctgatctatgtggaggctagcgagtattacccagctaggtaccagtcacatctcatgcttgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgcttttgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaattaatctctgcgctggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggattaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttagggagaaaatagtaccagcagctaaggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaggaggaccttgaagtcatgtttgggaatgtatcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgtcctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtatcactccagcgtgtactcgctcccaccagatccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaatcccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgatattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgttctgaaaacaacaccgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacgatcgaggctctcttccaaggtccactcaagttcagaccaattaagatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaggaagtgcgccagtactgc-agggatcaaggctggattgttcctgaaactcccaccaatgtagagcggcaccttaacagagcggtgcttgtcatgcaatccatcgctacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagcctcgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagagatatcaccagattcatcccagaaagtattagcactgctagcgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagcggtaagcctacccaccgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcctaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatgtcttcgagggaaataaggaaccagctgtcttacacagtaaagacccccgacttgaggtagattttgaacaggccctgttttctaagtatgtggggaacacactacatgagcctgacgagtacatcaaagaagcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctatggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatctcccttactccacttatgtcaaggacgagctgcgctcgattgataagattaagaaagggaagtcccgtctgatcgaggccagtagtctgaatgattcagtatacctcagaatgactttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagagttggttcttagggagatagggtatagtgagggggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccttcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaagacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggcaaggaatatggtctgaccatgactcctgctgataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgagcagtttccatttttgattcaccctactatgccgatgagggagatccatgagtccatacgatggaccaaggacgcacgaaacacccaagatcatgtgcggtccttgtgcctcctggcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-taccagag----atctggt------c-a-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-tacct-a-a-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>GQ279370.1_Human_enterovirus_71_strain_SZ/HK08-6_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattacatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaggaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcttagtcgctgtcctaccggagtatgtcattggaacagtggcaggcggtacagggacgg------aagatactcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttggttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttgtgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccgtggcaatccaccttactgggtcaattgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggccctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagtagagccctcactcacgctctaccagca--------cccacaggccaggacacacaggtgagcagtcatcgactggacacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagacctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctatatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagcctgattctagggaatcccttgcatggcaaaccgccactaacccctcggtttttgtcaagctgtcagaccctccatcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaatcgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgactgccagacaggggtgtactactgtaactcaaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtggaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggcggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgcttttgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcgctggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggattaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcatttcgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgactctgacgctattcgccgtaggttctacatggactgtgatattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgttctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacgatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagtgatctccttgctagcgtagatagtgaggaagtgcgccagtactgc-agggatcaaggctggattattcctgaaactcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgctacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgtcactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggggtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagagatatcaccaaattcatcccagaaaatattagcactgctagcgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatgtcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtggggaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctatggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtatacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaaggggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaagacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggcaaggaatatggtctgaccatgactcctgctgataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccgatgagggagatccatgagtccatacgatggaccaaggacgcacgaaacacccaagatcatgtgcggtccttgtgcctcctggcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-taccagaa----atctggt------c-a-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>EU864507.1_Human_enterovirus_71_isolate_EV71/Zhejiang08_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactttggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaggaagcggctaacatcatagttggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacagttccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatactcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggctgtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagatatgccaggtagagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccgtggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggccctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagacagg--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctgccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggtaaagttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccccctcgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaaattgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgccggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccacctccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctacgtggaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacccggtgattgcggtggcatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcagtgggctcgttggctttgcagacgtccgggacctcttgtggttagatgaagaagctatggagcagggtgtgtccgactacatcaag-ggtctcggagatgcttttgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggataaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcctcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttatcgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacaactgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttggaaatgtggcgtacctagccca---------cttctgccgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagctactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacgatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaggaagtgcgccagtactgc-agggatcaaggctggattattcctgaaactcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatacaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaaacaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagctgtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcagggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagagatatcaccaaattcatcccagaaaatattagcactgctagcgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatgtcttcgaaggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctatggtactgagaatcttgaggctattgatcttcacactagcgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtacggtcttgaccttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtatacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagagagatagggtatagtgaaggggcaatctcactcattgagggaatcaaccacacacatcatgtatatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggttgcttacggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggcaaggaatatggtctgaccatgactcctgctgataagtctccttgcttcaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacacccaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggccatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-taccagaa----atctggt------c-a-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ456309.1_Human_enterovirus_A_strain_GZ08-831_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggcacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgttccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgact-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccaccg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcactacgcaagaagcggctatcatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggacaaaccaacgcgcccagatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacag------aagatactcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcagcacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgagaaccaacaattgtgccacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccgctagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaactactgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccgtggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggccctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgctcgagatggggtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaaattgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacgttcggagaacacaaacaggaaaaagatcttgaatatggggcatgtcctaataacatgatgggtacgttctcagtgcggactgtggggatctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggagccatttatgtgggcaattttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagagcctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcctgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaggctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaattaatctctgcactggtgattgtgatcagaagtgattatgacatggttacccttaccgcgaccttagcgctgataggttgtcatggcagcccttgggcttggatcaaagctaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaattcattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctatatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcaggacgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaagccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagacagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaaactcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccagtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactagagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatatcttcgagggaaataaggaaccagctgtcttgcacagtaaggacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagtatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagacattttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgcccgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctaccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaaggggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcattgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccgattgattgcttggaactagcaaagactggcaaggagtatggtctgaccatgactcctgctgataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ360546.1_Human_enterovirus_71_isolate_GZ-08-03_complete_genome
------------------ttaaaa--cag--ct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----tacctg----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacattatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggggcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtctcaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggggtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagacagg--------gtggcagacgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagttattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcggaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggagccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacgatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttctcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagagcctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcctgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-gatctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaggctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaattaatctctgcactggtgattgtgatcagaagtgattatgacatggttacccttaccgcgaccttagcgctgataggttgtcatggcagcccttgggcttggatcaaagctaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaattcattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccagaccattttgatggatacaagcaacaggtggttacagtgatggatggtttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcgaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaaatgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcggtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgacgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaagttcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggttttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggcgacatctgttgggaaggttgtcggcattcatattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggt---------taaagaaactggaggactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcagaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccaggggcgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagtcttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcagcaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagatgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtctttgtgcctcctagcatggcataatggcaagcaagaatatgagaagtttgtgagcacgattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaactggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP274874.1_Enterovirus_A71_strain_Taipei/C4-Y100-P4/2011_complete_genome
---------------------------------------------------------------------------------------------------------cct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagta-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttataccac-----taacctt--------------gaattctgtgact-acccttaattatattttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaattcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctacgctgccacagcaggcaaacagagtctcaagcaggatccagataagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccagatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaacgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagacccaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcgcagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccagggggtcctctgcccaaggaccgggcgactgccatgttgggcacgcatgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagtaacactcattatagagcacatgcccgagatggagtgtttgactattacaccacagggttagtcagtatatggtaccagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctacagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccaaaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgaaacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgttttgatgcagagttcacttttgttgcgtgcacacccactgggggagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgctaccaacccctcagtttttgtcaagctgtcagaccctccggcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacattctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaatcgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccactgcccaaggttgtgacacgattgcccgttgcgattgccagataggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctacgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcggaacctggtgattgcggtggtatccttagatgccaacatggcgtcatcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaattatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggcttaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcttcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcaccgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtccttattctgtcaaatggtgtccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgttctgaaaataacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggtaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaagaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcaccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttcactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaagggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaaccatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatatcagcactgctagcgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaattttcctaccaaagcaggacagtgtggaggagtggtgacgtctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtaggaaacacactacatgagcctgacgagtacatcaaagaggcagctctacattatgcaaaccaattaaagcaactagaaatcaatacctctcaaatgagcatggaggaagcctgttacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaaattctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcgggcatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaatcctgacacattctggagcaagctgccaattttgctccctggttcactcttcgcctttgactactcaggctatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggcgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgacccctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttccttaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacggaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----a--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP861243.1_Enterovirus_A71_strain_C4_complete_genome
-------------------taaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcggct-g-ttttata-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagta-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttataccac-----taacctt--------------gaattctgtgact-acccttaattatattttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaattcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctacgctgccacagcaggcaaacagagtctcaagcaggatccagataagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccagatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaacgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagacccaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcgcagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccagggggtcctctgcccaaggaccgggcgactgccatgttgggcacgcatgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagtaacactcattatagagcacatgcccgagatggagtgtttgactattacaccacagggttagtcagtatatggtaccagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctacagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccaaaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgaaacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgttttgatgcagagttcacttttgttgcgtgcacacccactggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgctaccaacccctcagtttttgtcaagctgtcagaccctccggcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacattctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaatcgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccactgcccaaggttgtgacacgattgcccgttgcgattgccagataggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctacgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcggaacctggtgattgcggtggtatccttagatgccaacatggcgtcatcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaattatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggcttaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcttcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcaccgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtccttattctgtcaaatggtgtccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgttctgaaaataacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggtaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaagaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcaccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaagggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaaccatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatatcagcactgctagcgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaattttcctaccaaagcaggacagtgtggaggagtggtgacgtctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtaggaaacacactacatgagcctgacgagtacatcaaagaggcagctctacattatgcaaaccaattaaagcaactagaaatcaatacctctcaaatgagcatggaggaagcctgttacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcgggcatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaatcctgacacattctggagcaagctgccaattttgctccctggttcactcttcgcctttgactactcaggctatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggcgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgacccctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttccttaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacggaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taac--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ736684.2_Human_enterovirus_71_strain_SHAPHC695F/SH/CHN/10_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------aa-t-gaaacttagaag--------------caata-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattagccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctc--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttcttacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaagcagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatattcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcacgacgcaagaagcggctaacatcatagtcggctatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggatcactaccactcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagacacccaccccccctacaagcagacccaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcaacgccagtaatccctataactatcacattggccccaatgtgctctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgaactgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggccagttgtgcgggtactacacccaatggtcagggtcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccagggggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagtaacactcattatagagcacatgcccgagatggagtgtttgactattacactacagggttagtcagtatatggtaccagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccaaaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggggcatcatcaaatgctagtgacgagagcatgattgaaacacgttgtgttcttaactcgcatagtacagctgagaccactcttgatagtttcttcagtagggcaggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgttttgatgcagagttcacttttgttgcgtgcacacccaccggggaggttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccggcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagaccttgaatacggggcatgtcctaataacatgatgggtacattctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctgttcaaagccaacccaaattatgctggcaa----ctctattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccacccataatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccactgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcggaacctggtgattgcggtggtatccttaggtgccaacatggcgtcatcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacattaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggattaaagccaaaacagcctccatcttaggtatccctatcgcccaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcgaacttggaacaatctgctgcttcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagtttcaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcaccgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtccttattctgtcaaatggtatccaccgtagatttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgttctgaaaataacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggtaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtggagcggcaccttaatagagcggtgctcgtcatgcaatccatcaccacagtagtggcggttgtttcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcatattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggtccgagccttgactttgctctctccctactgagaaggaacatcaggcaggtccaaacagaccaagggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaaccatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgagaagtttagggatatcaccaaattcatcccagaaaatatcagcactgctagcgatgccaccctagtgatcaacacggagcacatgccgtcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggcaagcctacccatcgcaccatgatgtacaattttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctctacattatgcaaaccaattaaagcaactagaaatcaatacctctcaaatgagcatggaggaggcctgctatggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctagggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccctactccacttatgtcaaggacgagctacgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcgggcatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggctatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgacccctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacggaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatacgagaagtttgtgagcacaattaggtctgtcccagtagggagagcgttggctattccaaattatgaaaatcttagacgaaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF444809.1_Enterovirus_A71_isolate_EV71/Queenmary/HongKong/2012_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagta-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggtaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaaccattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggacgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcaaacccaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccactgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggccttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcgttggaagtcaccttcatgtttactggatcattcatggccactggcaagatgctcatagcctatacaccgccagggggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagtaacactcattatagagcacatgcccgagatggggtgtttgactattacaccacagggttagtcagtatatggtaccagacaaattacgtggttccaatcggtgcacccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattatgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccaaaacacacaggtgagcagtcatcgactggatacaggtaaagttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgaaacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggggagatagacctccctcttgagggaacaac-taacccaaatggttatgccaactgggacatagatataacaggttatgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcatgcacacccaccgggggagttgtcccgcaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatctcttgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacattctcagtgcggactgtggggacttccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtaagcaactttagagtggtcaaccgacatcttgccactcataatgattgggcaaaccttgtttgggaagacagctctcgcgacttgctcgtatcatccaccactgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgcaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctggtctatgtggaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgttatcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagccatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggtttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaactttagcgctgataggttgtcatggtagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaagagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacaactacca-ctgctagagaatcagatctcaaacttggaacaatctgctgcttcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------tttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcaccgggaagtctctagccactggcattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggtcacagtgatggatgatttgtgtcaaaaccccgatggcaaggatatgtccttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtgccaacagtatctgattctgacgctattcgccgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgttctgaaaataacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggtaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagatgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccaatactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcgacaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaagggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaaccatttggattgagcacaaacttgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaactctcatcactctcgacaccaacgaaaagtttagggacatcaccaaattcatcccagaaaatatcagcactgctagcgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaattttcctactaaagcaggacaatgtggaggagtggtgacatctgttgggaagattgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgctaaccaattaaaacaactagaaattaatacctctcaaatgagtatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctgccaccagggacgtgagtagaatgaagttctacatggacaagtacggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagcagtctaaatgattcagtgtacctcagaatggcttttgggcatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggctatgatgccagtcttagccctgcctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttagatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgacccctgctgataaatctccttgctttaatgaggtcaattggggtaacgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JF830007.1_Human_enterovirus_71_strain_EV71/Ningbo.CHN/065/2010_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-ttgcgcggttgaaggagaaaacgttcgttacccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagaacaattatt-----taccta----tttatt-ggttttgtacctt-----taacctc--------------gaattctgtgacc-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaagtgtccacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagattcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcccgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccgcgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtattggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagacacccaccccccttacaagcagacccaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggtctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtctcagcacctattctaccaaacttccaccccaccccatgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgcttatagcctatacaccgccaggaggtcctctacccaaggaccgggcgaccgccatgttaggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtaccagacaaattatgtggttccaattggtgcgcccaatacagcctatataatagcactagcggcagctcaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccaaaacacacaggtgagcagtcatcgactggatacaggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagagcgggattggttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtacccattagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctgttcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacatcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctgtttatgtgggcaactttagagtggtcaaccggcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccactgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtatactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacacctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgttggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagaccttttgtggttagatgaagaagctatggaacagggcgtgtctgactacatcaag-ggtctcggagacgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattatgacatggttaccctcactgcaaccctagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccggcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcttcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattatcaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagatttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtgccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaggtgacagactcgtacaaaacagatctaggtagattggatgcagggcgagccgctaaactgtgttcagaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccattcaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcggaacttattagggaatacagcaataggtccgccattggtaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcgacaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgccctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaaccatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatatcagcactgctagcgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggcaagcctacccatcgcaccatgatgtacaattttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatatctttgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttttctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactctacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggtaaggagtatggtctgaccatgacccctgctgataaatctccttgctttaatgaggtcaattggggtaacgcgaccttcctcaaaaggggctttcttcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-agtagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ004559.1_Enterovirus_A71_isolate_EV71/GD10-12/2010_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------caaca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggaaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtaatcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gtggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaactaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttggccaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtatgtgctagatgctggcgtcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccactgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatctaccctactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcacctttatgttcactggatccttcatggccaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccgatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctacagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagtagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactctcgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgtcgcgtgcacacccaccgggcaagttgtcccacaattgctccagtatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcggtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacctgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgcgaaaacattacccagttagtttttcaaaacccagcctgatctatgtagaggctagtgagtattacccagccaggtaccagtcacatcttatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgagctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagagaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttaaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcaccgcaaccttggcactgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggcatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagtaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggaccattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccctgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctatccgccgcaggttctacatggactgtgacattgaagtgacagactcgtataaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagataggaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattagaatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaacagagcggtgcttgtcatgcaatccatcgccacagtagtggcggtcgtctcattggtgtatgtcatctacaagctctttgcaggatttcagggtgcgtattctggtgctcctaagcaagtacttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagttctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaatttatcccggaaaatatcagcactgctagtgatgccaccctagtgattaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaagattgtcggtattcacatcggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaaccgggagactcaacatcaatggaccaacccgcaccaagttagaacctagcgtattctatgacatcttcgagggtaataaagaaccagctgtcttgcacagtaaggacccccggcttgaggtagactttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagagattaatacctctcaaatgagtatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagagacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggcttttcacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaaactgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcgggaacatccatttttaactcaatgatcaacaacattattatcagagcactgctcataaaaacgtttaagggcattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaatagattgcttggagctagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctaaaaaggggctttttgcccgatgaacagtttccattcttgattcaccctactatgccaatgagagagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagagtatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ325852.1_Human_enterovirus_71_strain_EV71/HENAN/DC/2010_complete_genome
-----------------ttaaaac--aag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---c---tccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgatccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttacattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----tactta----tttatt-ggttttgtaccat-----tgacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgttccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccattactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgctaactgaaactggagtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtacagtgcaatgccagtaaattccatcaaggagcactcttagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttggttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccgccgagctaaaacctggcacaaaccaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcagggtcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatttgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcagcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgacatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatag---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-caacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccgcaattgctccaatatatgtttgtgccacctggagcccctaagccggattcaagggaatcccttgcatggcaaaccgccactaacccctcagttttcgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaagcaggagaaagatcttgaatacggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccaaaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggtaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtatcaatcacatctcatgctcgcacagggtcactcagagcctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcctgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagcgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcagaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaagatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggttcaccaggcactgggaagtctctagctactagtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaagatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggaaaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggacgcagggcgagctgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcagcacaatcgaggctcttttccaaggtccactcaagttcaggccaattaagatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattccggcgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaatctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcactaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggttttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggggtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacaatacatgagcctgacgagtatatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattgatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaagctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctatatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgattgaggccagtagtctaaatgattcagtgtacctcagaatggtttttggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaagtggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgcttataaaaacatttaagggcattgatttggatgaactcaacatggttgcttacggagacgatgtgcttgctagctatcccttcccaattgattgtttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgagcagtttccatttttgattcaccctactatgccaatgagtgagatccatgaatccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaacct-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-tacaa-a-a-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF142413.1_Enterovirus_A71_isolate_HNCZ/201211_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttatg-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtga-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---acctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccag--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcctgacccttaacacagctaaa-----tatgggttcgcaagtgtctacacagcgctctggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgaatggccttcctactgttcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgagactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtacagtgcaacgccagtaaattccatcaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcgcagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgccacaataatagtgccttatattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggggcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggccttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacctgctagagttatgccaggtggaaaccattctagaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgttcactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacggcctatataatagcattagcggcagctcaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatag---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactctcgatagtttcttcagcagggcgggattagttggggagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtagagctgttcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaattgctccaatatatgttcgtgccgcctggagcccctaaaccagattcaagggaatcccttgcatggcaaaccgccactaacccctcggtttttgtcaagctgtcagaccctccagcgcaggtttcggtaccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggggaacataaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctctaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaattacctattcaaagccaacccaaattacgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtctgggaagacagctctcgcgacttgcttgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgactgccagacaggggtgtactactgtaactcgatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagagcctggtgattgcggtggtatcctcagatgccagcatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaaaaactatcttatagggtctgaaggagcagttgagaaagtcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttactctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggctcaaggagaaaatagtaccagcagccagagagaaggttgaatttctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaagaggatcttgaaatcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgtcctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggtactgggaagtctctagccactggtattatcgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggtcacagtgatggatgatttgtgtcaaaaccccgatggtaaggacatgtctttattctgtcagatggtgtccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgatattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgccaaactgtgctctgaaaacaacaccgcaaatttcaaacgttgcagcccattggtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agtcttgaggaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaggaagtacgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcacctcaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaatatcaggcaagtccaaacagaccaagggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcggttgaactggtggatgagcaaggagtcaacctggaattaactctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagagaatattagtactgccagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtataactttcctactaaagcaggacagtgtggaggagtggtgacatcagttgggaaggttattggtattcacattggtggtaatggcaggcaaggtttttgcgcaggcctcaagaggagttactttgttagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaagtagactttgagcaggccctgttctccaagtatgtgggaaacacactacatgagcctgatgagtacatcaaagaggcagcacttcattatgcaaaccaattaaagcaactagaaattaatacttctcaaatgagcatggaggaggcctgctacggcactgagaatcttgaggctattgatcttcacactagtgcaggctacccctacagtgccctggggataaagaagagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtctcgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgatacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaattaaccacacacatcatatatatcgtaataagacctattgtgtgcttggcgggatgccctcaggctgctcgggaacatccattttcaattcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggtattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccgattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgcttcaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagttcccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX111888.1_Human_enterovirus_71_isolate_GD-DG2011-1_polyprotein_gene_complete_cds
-------------------taaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---acctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatc-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcctgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctctggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgctacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgaatggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtgtcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctacagatcagggttctgcatccacgtacagtgcaatgctagtaaattccatcaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacaggaacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggggcgacgccagtaatccctataactattacattggctccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccacaccgtgtatccacatacctggtgaagttaggaacctgctagagttatgccaggtggaaaccattctagaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcggtgtttagagctgatcctgggcgagatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcgggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattatgtggttccaatcggtgcgcccaacacggcctatataatagcattagcggcagctcaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatag---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggggagatagacctccctcttgagggcacaac-caacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaaaccagactcaagggaatcccttgcatggcaaaccgccactaacccctcagtttttgttaagctgtcagaccctccagcgcaggtttcggtaccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggggaacataaacaggagaaagatctcgaatacggggcatgtcccaataacatgatgggcacgttctcagtgcggactgttgggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattacgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtctgggaagacagctctcgcgacttgcttgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgactgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgatcgcacagggtcactcagaacctggtgattgcggtggtatcctcagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgatgcagtctcaagggaggttgaagctctcaaaaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaattcattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataatttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggaaaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctctccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggaccattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacaccgcaaatttcaaacgttgcagcccattggtgtgtgggaaggctatccaacttagagataggaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaggaaaaaccagccccagacgctatcagcgatctccttgctagcgtagatagtgaagaagtacgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacggtgcagggcccgagccttgactttgctctctctctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaactcttatcactcttgacaccaacgaaaagtttagggatatcaccaagttcatcccagaaaatattagtactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttatcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtataactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttattggtattcacattggtggcaatggcaggcaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcctaataaagaaactggaagattcaacatcaatggaccaacccgcaccaagttagaacctagtgtgttccatgacatcttcgagggaaataaagaaccagctgttttgcacagtaaagatccccgacttgaggtagactttgagcaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacgtcatagaggcggctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctacagtgccctggggataaagaagagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtatatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgctcgggaacgtccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggtattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgaaatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC570453.1_Human_enterovirus_71_strain_SH12-276_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccat-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---t---cccc-t------at-t-gtaacttagaag--------------cagta-aaccac-gatcaa-tagcaggcataacgctccagttatgtctcga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacatagctaaa-----catgggttcgcaagtgtctactcagcgttctggttctcacgagaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctacgctgccacagcaggcaaacagagtctcaagcaggatccagataagtttgcaaatcctgttaaagacatcttcaccgaaatggcagcgccactgaaatccccatccgctgaggcatgtgggtacagtgaccgagtggcgcaattaactataggcaactccaccatcaccacgcaagaagcggctaacattatagtcggctatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttctacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagtttccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatactcaccctccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccctttgattctgccttgaatcactgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaatttgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacgaatcaatttttaaccaccgatgatggcgtctcagcacccattctaccaaacttccaccccaccccgtgtattcacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcagtgtttagagccgatcctgggcgaaatggaccatggcaatccactttactgggtcaattgtgcgggtattacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaagaccgagcgaccgccatgttgggtacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacaggattagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaagatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagcg--------cccacaggtcagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcttcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagacctcccccttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtggagctattcacttacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaactgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaggatcttgaatacggggcatgtcctaataacatgatgggtacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactatctattcaaagctaacccaaattatgctggcaa----ctccattaaaccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgctcaaggttgtgatacgattgctcgttgtgattgccagacaggggtgtactactgtaactcaatgagaaaacactacccagttagtttttcaaaacccagtctgatctatgtggaggctagcgagtattacccagccaggtaccaatcacatctaatgctcgcacagggtcactcagaacctggcgattgcggtggtatccttagatgccaacatggcgtcgttggcatagtgtccactggtggtaatgggctcgttggctttgcagacgttagagacctcttgtggttagacgaagaagctatggaacagggcgtgtctgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttaaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagcgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcctggatcaaggccaaaacagcctccattttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaatttctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacagaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcgccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtgtccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagcaatatcatagtaccaacagtgtctgattctgacgctattcgtcgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcaggtacagtgtggatacggtggtttcggaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattagggtt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccattgccacagtagtggcagttgtttcattggtgtatgtcatctacaagctttttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccattcacaacctggcaaaactatttggattgagcacaagctcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcgtcactcttgataccaacgagaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggaaagcctacccatcgcaccatgatgtacaactttcctactaaagcgggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggcttttgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagtccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatgtcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcttgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaaacaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctatcgatcttcacactagtgcaggttacccctatagtgccctagggataaagaaaagagacatcttagaccccaccaccagggacgtgagcagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgacaaaatcaagaaagggaagtctcgtctgatcgaggccagtagtctgaatgactcagtgtacctcagaatggctttcggacatttgtatgagactttccacgcaaatcctgggacgataactggatcagccgtggggtgtaatcctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttacgatgccagccttagccctgtctggttcagagcgttagaattggttcttagagagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtacttggtgggatgccctcaggctgttcgggaacatccattttcaattcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggacgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtgggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ632498.1_Enterovirus_A71_strain_wenzhou256_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------aaattctgtgacc-acccttaattatatcttggcccttaacacagctaga-----catgggttcgcaagtgtctactcagcgctccggttctcacgagaactcaaactcagccactg-agggttctaccataaactataccaccatcaattactacaaagactcctacgctgccacagcaggcaaacaaagtctcaggcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgaccgagtggcgcaattaactataggcaactctaccatcaccacgcaagaagcggctaacattatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataagccaacgcgcccggatgtttcagtgaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccatgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacatcagtggatcaatttgaggaccaataattgtgccataataatagtgccatacattaacgcactgccttttgactctgccttgaatcactgcaactttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgtttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcagtatttagagccgatcctgggcgaaatggaccatggcaatccactttactgggtcaattgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctttgcccaaagaccgggcgaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggtgtgttcgactactacaccacaggattagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtgattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctttaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggacacaggcaaggttccagcactccaagctgctgaaattggagcatcttcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggggagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcacaaatgcgtaggaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactatctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------ccttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgctcaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagtctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgttggcatagtgtctactggtggtaatgggctcgttggctttgcagacgttagagatctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcaccgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgactacgacatggttaccctcactgcaaccttagcgttgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcgtcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacctggagcaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctggccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgacaagtaccactccagcgtgtactcgctaccaccagacccggatcattttgacggttacaagcaacaggtggttgcagtgatggatgatttgtgtcaaaaccccgatggtaaggacatgtctttattctgtcaaatggtatccaccgtagac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>JQ074187.1_Human_enterovirus_71_strain_EV71/Jinan1002_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttgtattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttaacccttaacacagctgaa-----catgggttcgcaagtgtctacacagcgttccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccataaattactacaaagactcctatgctgccacagcaggcaaacagagtcttaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccagatgtttcagtgaacaggttttacacattggacactaaattgtgggagaagt------------------cgtccaagggatggtactggaagttcccggatgtgttaaccgaaactggagtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccatggtgcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacggggacgg------aagatacccaccctccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaactgtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccgctagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacgaatcaatttttaaccaccgatgatggcgtttcagcacccattctaccaaacttccaccccaccccgtgtatccatatacccggtgaagttaggaacttactagagttatgccaggtggagaccattctgggggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccctgggcgaagtggaccatggcaatccaccttactgggccagttgtgcgggtactacacccaatggtcaggatcatcggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtgtatggtatcagacaaattacgtggttccaatcggcgcgcccaacacagcctacataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgccagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggacacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggatatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagaattcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgccactaacccctcagtttttgttaagctgccagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccacacataatgattgggcaaatcttgtttgggaagacagctcccgcgacttgctcgtgtcatctaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactactgtaattcaatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggccactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctacaggtggtaatgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgctttcggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgggaaaatcttgaagaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctgaataacttgaaacagctgcca-ctgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaaatctctagccactggtattattgcccgagcaatcgctgataagtaccactctagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatctgtgtcagaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttttacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaataacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaggctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagtttaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatttacaagctctttgcagggtttcagggtgcgtactctggcgctcctaagcaagtgcttaagagacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttgggttgagcacaagctcgtgaacgtccttgatgcagttgaactggtggatgagcaaggggtcaacctggaattaaccctcatcactcttgacaccaatgaaaagtttagagatatcactaaattcatcccagaaaatatcagcactgctagtgacgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgcgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtgggggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggccttaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatgggccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaaaaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagagattaatacctctcaaatgagcatggaggaggcttgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagcagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctggaacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccgattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtatggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacttccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacattcaagggcattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgactatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctaaaaaggggctttttgcccgacgaacagtttccatttttgattcaccctaccatgccaatgagggagatccatgagtccatccgatggaccaaggacgcacgaaacactcaagatcacgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctaccccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HM245927.1_Human_enterovirus_71_isolate_EV71/Henan/294/2010_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaaacactttg-tacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagta-aaccac-gatcaaatagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaag-------gaattgttaccatatagctatagggttggccatccag--tgtgcaacagagtaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaag-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactataccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatctttactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccatcaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcgggcggtacagggacgg------aagatacccaccccccttacaagcaaactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggtatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactaccttttgattctgccttgaaccactgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacaccagtaatccctataactatcacactggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttactagagttatgccaggtggagaccattctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccctgggcgaaatggaccatggcaatccaccttactgggtcagctgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactgggtccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccaaaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgagattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacattctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagagcgtggatacctcgcccgatgcgcaaccagaactacctattcaaagccaacccaaattatgctggcaa----ttccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccaaacaggggtgtactactgtaactcaatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagagcctggtgattgcggtggcatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagcccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagtgcttcctggctcaagaagtttaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgccgcctcacaggaggaccttgaggtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaacaactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagttcgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgtcgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgttctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcaccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggttccagggtgcatattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgccctctccctactgaggaggaacatcaggcaagtccaaacagaccaagggcatttcaccatgttgggtgttagggaccgcttagcagtcctcccacgccactcacaacctggcaaaaccatttggattgagcacaagctcgtgaacgtcctcgatgcagttgaactagtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatatcagcactgctagcgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaattttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaagttgtcggtattcacattggtggtaatggcagacaaggtttttgcgcaggcctcaagaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttggagcctagtgtattccatgacatcttcgagggtaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaagccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtatatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgttacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttacactacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaagctttccacgcaaatcctgggacaataactggatcggccgtggggtgtaaccctgacacattctggagcaagctgccaattttactccccggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtaccgtaataagacctattgcgtgcttggagggatgccctcaggctgttcaggaacatccattttcaattcaatgattaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgacccctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgagcagtttccattcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggatgcacgaaacactcaagatcatgtgcggtccttgtgcctcctggcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaattttgt-ta-taacc-agg-aatagcaa------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>GQ994990.1_Human_enterovirus_71_strain_Chongqing2-09-China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtaccttggtacctttgtgcgcct-g-tttttac------accc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacactccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaactatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagttggttatggtgagtggccttcctactgctcagattctgatgctacagcagtggataaaccaacgcgcccggatgtctcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtctttgggcaaaatgcacaatttcactacctctaccgatcagggttctgtatccacgtgcagtgcaatgccagtaaatttcaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatactcaccccccttacaagcagactcaacccggcgctgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataaccatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttactagagttatgccaggtggagaccattctggaggttaacaa----------cgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggctcgttggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctacacaccaccagggggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcatctgttacccttgtaataccatggatcagcaacactcattatagagcacacgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaatttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cctacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgaaaccacgcttgatagtttcttcagcagggcgggattggttggagagatagatctccctcttaagggcacaac-taacccaaatggttatgccaactgggatatagatatatcaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagactctagggaatcccttgcatggcaaaccgccactaacccttcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagcgcttatcaatggttttatgacggatatcccacattcggggaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctctagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacaccttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgatttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggccagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcattcagaacctggtgattgcggtggtatccttagatgccaacacggcgtcgtcggcatagtgtctaccggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaagttttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggcatccctatcgcccaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgctacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagctactggcatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgctgggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaattgaagctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgtcagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatctatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgaggaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagagatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttgggttgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattgactctcatcactcttgacaccaacgaaaagtttagggacatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttatcccagtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggtaatggcagacaagggttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactgggagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaactaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctatggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgactgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtcgggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcgctctttgcctttgactactcaggttatgatgccagccttagccctgtatggttcagagcattagaattggttcttagggagatagggtatagtgaggaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaacttaacatggtcgcttatggagacgatgtgctcgctagctaccccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctaaccatgactcctgctgataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagaccatgtgcggtccttatgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggccatcccaaattatgagaatcttagacgcaattggctcgagttatttt-----agaggctgtac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taccc-a-a-aatagca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM055005.1_Enterovirus_A71_strain_Laos2011_HFMD12V_partial_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtatctcggtacctttgtgcgcct-g-ttttact---a--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aatcac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgctcagca--ctc-cccca---gtgtagaccaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atcttcatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccgt-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctctggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacaccaaattgtgggagaaat------------------cgtccaagggatggtattggaagttcccggatgtgttaactgaaactggggtttttgggcaaaacgcacaattccactacctttaccggtcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgttattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccgtacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtacctattagcccactagactacgaccaaggggcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagttaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccactccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaagtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtatttagagccgatcctgggcgagatggaccatggcaatccaccttactgggtcagttgtgcggatactacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggccaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacactacaggactagtcagtgtatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaatttcactatgaaattgtgcaaggatactagtgatatcctgcagacgggcaccattcagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagccctcacacacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagggccggattagttggagagatagatctccctcttgagggcacaac-taacccgaatggttatgccaactgggacatagatataacaggttacgcacaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccactggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatctcttgcatggcaaaccgccactaacccctcggtttttgtcaagttgtcagaccctccagcgcaagtttcagtgccattcatgtcacctgcgagtgcttatcaatggttctatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcatggatacctcgcccgatgcgcaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgatttgctcgtgtcatccaccaccgcccaaggttgtgacactattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagttagtttttcaaagcccagcctggtctatgtagaagccagcgagtattacccagccaggtaccaatcacatctcatgctcgcgcagggtcactcagaacctggtgattgcggtggtatcctcagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacattaag-ggtctcggagacgcctttggaacaggcttcactgacgcagtttcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaagatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggcatccctattgcccaaaagcagagcgcttcctggctcaagaagttcaatgatatggccaacgccgctaaagggctagagtgggtttccaacaagatcagcaaatttattgattggcttaaggaaaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctacca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctggctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcataattaggggctcacctggcactgggaagtctctagccactggtattatagctcgagcaatcgctgacaagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtgtccaccgtggacttcatcccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaactgtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaattgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagggatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaaattcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccactaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcagacaagtccaaacggaccagggccatttcaccatgttgggtgttagggatcgcctagcggttctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccagtgggtgacgttgtgcagtatggctttttgaatcttagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaagggttttgcgcaggcctcaaaaggagttactttgctagtgaacagggggagatccagtgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaagttagaacctagtgtattccacgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaaatatgtgggaaacacgctacatgagcctgacgagtatatcaaagaggcagctcttcactatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggctacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggatgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccctactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatgactttcgggcatttgtatgagactttccacgcaaatccagggacgataactggatcagccgtgggatgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagtcttagccctgtgtggttcagagcattagaattggttcttagggagatagggtacagtgaagaggcaatctcactcattgaggggatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcggggacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgagctcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaatactggtaaggaatatggtctgatcatgactcctgctgacaaatcttcttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttctgcccgatgaacagtttccattcttgattcaccctactatgccaatgagggagattcatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaaacaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttagctatcccaaattatgaaaatcttagacgcaattggctcgaattgtttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaaagt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ998852.1_Human_enterovirus_71_strain_EV71/Henan/106/2009_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaaacactttggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tctccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagtt-cggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagctagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---atttttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggctttgtaccat-----taacctt--------------gaagtctgtgatc-ac-cttgattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctctggttcccacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagactctgacgctacagcagtggataaaccaacgcgcccggatgtttcggtgaacaggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaagttccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatactcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtatgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacgttggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtattcacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------cgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgcttatagcctatacaccaccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagggcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtaccagacaaattatgtggttccaatcggtgcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaagatgccagtgatatcctgcagacgggcactatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagacagcgtgggcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgaaaccactctagatagtttcttcagtagagcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaagtgctccaatatatgtttgtgccacctggagcccctaaaccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtgggtacctcgcccgatgcgcaaccagaactacctattcaaagccaacccaaattatgctggcag----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccactgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaagcccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggaggtatccttagatgccaacatggcgtcgttggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggctagatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgcttttgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctaaggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatttcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcgaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcggaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtggatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaaactcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggcgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacctgttcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgataccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacagagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaggcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcaggcaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagctagaacctagtgtattccatgacatcttcgagggaaataaggaaccagctgtcttgcacagtaaagaccctcgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcctagaccctaccaccagggacgtgagtagaatgaagttctacatggataagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgcctgattgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacacttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgcaaccctgacacgttctggagtaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagtcttagccctgtctggtttagagcattagaattggttcttagggagatagggtatagtgaaggggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccgttttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggcaaggagtatggtctgactatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgccttttagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttgtttt-----agaggtaatac-------------------------acac---------------ctcaacccccaccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taaca---g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ426649.1_Human_enterovirus_71_strain_2010FJLY008_complete_genome
------------------ttaaaa--cag--ct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatctcggtacctttgtgcgcct-g-ttttata-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttacccgactagctacttcggaaagcc-tagtaacaccatgaaagttgcggagggcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tccatt-ggttttgtaccat-----taacctt--------------gaattctgtaacc-acccttaattatatctcgacccttaacacagctaaa-----catgggttcgcaagtgtctacacaacgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctacgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgagatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaacaattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtattggaagttcccggatgtgttaactgaaactggggtgtttgggcaaaatgcacaattccactacctctaccgatcagggttctgcattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagctaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacatcaacgcactgccttttgattctgccctgaatcattgcaactttggcctgttagttgtgcctattagtccactagactatgaccaaggagcgacgccagtaatccctataactatcacattggctccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtacccacgaatgtcactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgtgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggccaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggactttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattatgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaactgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtaagcagagcccttacccacgctctaccggca--------cccacaggccagaacacacaagtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagtaacatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttaagggcacgac-taacccaaatggttatgccaattgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctatttacctacatgcgctttgatgcagagttcacttttgttgcgtgcacgcccaccggggaaattgtcccacaattgctccaatatatgttcgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcgtgtcctaataacatgatgggcacgttctcagtgcggactgtggggacttccaagtccaagtaccctttggtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---cactac---------------------------------------tcttgga------------------------------------------aaatttggtcaacagtctggggccatttatgtgggtaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttactcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctacgtagaggctagcgagtattacccagccaggtaccaatcacacctcatgctcgcacagggccactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcactgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctctattttaggtatccctatcgctcaaaagcagagcgcctcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgagttcctaaataacttgaaacagctgcca-ttgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggttcaccaggcacagggaagtctctagccactggtattattgctcgagcgatcgctgacaagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctccaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacaggtctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaatactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgacctcctcgccagcgtggatagtgaagaagtgcgtcagtactgc-agggatcaaggctggattattcctgaggctcccaccaatgtggagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacaatagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcaggatttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaagctcgtgaacgtccttgatgcagttgaactggtggatgagcaaggggtcaacctggagttaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaacattagcactgctactgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggaaagcccacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatctttgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttttctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaaccaattaaagcaactagaaattaatacctctcagatgagcatggaggaggcctgctatggtactgagaatcttgaggctattgaccttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgataaaatcaagaaagggaaatcccgtctgatcgaggccagtagtttaaatgattcagtgtaccccagaatggccttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtaccgtaataagacttattgtgtgctcggtgggatgccctcaggctgttcggggacatccatttttaactcaatgatcaacaacatcattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttagagctagcaaagactggcaaggagtatggtctgaccatgactcctgctgataaatctccttgttttaatgaggttaattggggcaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgagaaccttagacgcaattggctcgaactatttt-----agaggttgtac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JF820312.1_Human_enterovirus_71_strain_LCH01_polyprotein_gene_complete_cds
----------------------------------------------------------------------------------------------------------------------------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaaattgcggagagcttcgttcagca--ctt-ccccg---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatatggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcgcacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatc-ggtttcgtaccat-----taacctt--------------gaagtctgtgacc-actcttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggctctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccactattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaaacaggatccagacaagtttgcaaatcctgttaaagacattttcactgaaatggcagcgccactgaagtccccatccgccgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggacaaaccaacgcgcccagatgtttcagtgaacaggttttacacattggacaccaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcgcaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacag------aagatactcaccccccctacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtactcgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgagaaccaacaattgtgccacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccatcctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------gaaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggtccgtggcaatccactttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggccctctgcccaaggaccgggcgaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgctcgagatggggtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggggcgcccaatacagcatatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcactatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggtcagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacggctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttaaaggcacaac-caacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgcagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggagattgtaccacagttgctccaatatatgtttgtgccacctggagcccctaagccagattctagagaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcggtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggaaaaagatcttgaatatggggcatgtcctaataacatgatgggtacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacttattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggcgctagtcgcacagctat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtatcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtactacccagccaggtaccagtcacacctcatgctcgcacagggtcactcagaacctggcgattgcggtggtatccttagatgtcaacacggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaagaagctatggagcagggcgtgtctgactacatcaag-ggtctcggagacgcttttgggacgggcttcactgatgcagtctcaagggaggttgaagcactcaagaactatcttatagggtctgaaggagcagttgagaaaattttaaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggtagtccttgggcctggatcaaagccaaaacagcttctatcttaggtatccctatcgcccaaaaacagagcgcttcctggctcaagaagttcaatgacatggctaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcgaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcatacctagccca---------cttctgtcgcaagttccaaccactatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcgccaggtactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttcccttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgtcgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcaggacgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaagccaattaggatt---agccttgaagaaaaaccagccccagacgccattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgt-agggatcaaggctggattattcctgaaactcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgctggtgtatgtcatctacaagctcttcgcagggtttcagggtgcgtattctggagctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgtcagggatcgcttagcagtcctcccacgacattcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatataaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgattaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggaattcacattggtggcaatggcagacagggtttttgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtatttcatgatatcttcgagggaaataaggagccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttctctaagtatgtggggaacacaatacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaatcaatacctctcaaatgagcatggaggaggcctgctacggtactgggaatcttgaagctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaggatgaagttttacatggacaagtatggtcttgatcttccttactctacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtatacctcagaatggcttttggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaatcctgatacattctggagcaagctaccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagcctcagtcctgtctggttcagagcattagaattggtccttagggagatagggtatagtgaaggggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaacacgatgatcaacaacattattatcagagcattgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgccagctatcccttcccaattgattgcttggaactagcaaaaactggcaaggagtatggcctgaccatgactcctgctgataagtctccttgctttaacgaggttaattggggcaatgcgaccttcctcaaaaggggctttttgcccgatgaacagttcccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaggcaagaatatgagaagtttgtgagcacgattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-ac------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HM002488.1_Human_enterovirus_71_strain_BJ366_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaaattgcggagagcttcgttcagca--ctt-ccccg---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatatggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcgcacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatc-ggtttcgtaccat-----taacctt--------------gaagtctgtgacc-actcttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtccacacagcgctccggctctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccactattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaaacaggatccagacaagtttgcaaatcctgttaaagacattttcactgaaatggcagcgccactgaagtccccatccgccgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggacaaaccaacgcgcccagatgtttcagtgaacaggttttacacattggacaccaaattgtgggagaaat------------------cgtccaagggatggtattggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcgcaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacag------aagatactcaccccccctacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtactcgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgagaaccaacaattgtgccacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccatcctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------gaaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggtccgtggcaatccactttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgttcactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggccctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgctcgagatggggtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggggcgcccgatacagcatatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcactatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctactagca--------cccacaggtcagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacggctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttgaaggcacaac-caacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgcagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaaattgtaccacagttgctccaatatatgtttgtgccacctggagcccctaagccagattctagagaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcggtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggaaaaagatcttgaatatggggcatgtcctaataacatgatgggtacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacttattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggcgctagtcgcacagctat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtatcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtactacccagccaggtaccagtcacacctcatgctcgcacagggtcactcagaacctggcgattgcggtggtatccttagatgtcaacacggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaagaagctatggagcagggcgtgtctgactacatcaag-ggtctcggagacgcttttgggacgggcttcactgatgcagtctcaagggaggttgaagcactcaagaactatcttatagggtctgaaggagcagttgagaaaattttaaaaaatcttattaaactaatctccgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggtagtccttgggcctggatcaaagccaaaacagcttctatcttaggtatccctatcgcccaaaaacagagcgcctcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcgaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcatacctagccca---------cttctgtcgcaagttccaaccactatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcgccaggtactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttcccttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcaggacgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtttcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggaccgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttctgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtatttcatgatatcttcgagggaaataaggagccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttctctaagtatgtggggaacacaatacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaatcaatacctctcaaatgagcatggaggaggcctgctacggtactgggaatcttgaagctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccactagggacgtgagtaggatgaagttttacatggacaagtatggtcttgatcttccttactctacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggcttttggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaatcctgatacattctggagcaagctaccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggtccttagggagatagggtatagtgaaggggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaacacgatgatcaacaacattattatcagagcattgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgccagctatcccttcccaattgattgcttggaactagcaaaaactggcaaggagtatggcctgaccatgactcctgctgataagtctccttgctttaacgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagttcccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaggcaagaatatgagaagtttgtgagcacgattaggtctgtcccagtaggaagagcgttggccatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctacac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP266579.1_Enterovirus_A71_strain_2006-52-9_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaaa------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacactatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattacatcttgacccttaacacagctaaa-----catgggctcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgatgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcaatgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccactgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcaatccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtaccagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgtaaggatgctagtgatatcctacagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttaaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcatggcaaaccgccaccaacccctcggtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagcgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgttagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattatccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcaggagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagaatgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagaccattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaacatcatagtgccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagagaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccaatactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacggtacagggcccgagccttgattttgctctctccctactgagaaggaacgttaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggcaaaactatttggatcgagcataaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaacccttatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatatcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggccagtagtttgaatgattcagtgcacctcagaatggctttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggtccttagggagatagggtatagtgaaggggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ600325.1_Human_enterovirus_71_strain_EV71/Jiangsu.P.R.C/07.08/10_polyprotein_gene_partial_cds
--------------------------------t-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacactatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgtcaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattacatcttgacccttaacacagctaaa-----catgggctcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgatgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaatcgtgggagaaat------------------cgtcaaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcaatgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaagcagttacacaagggtttccaactgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagaaccgatcctgggcgaaatggaccgtggcaatccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttaatcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctacataatagcactagcggcagcccaaaagaacttcactatgaaattgtgtaaggatgctagtgatatcctacagacgggcaccatccagggagatagg--------gtagcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcaactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttaaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcatggcaaaccgccaccaacccctcggtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagcgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgttagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgtacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattatccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagtagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcaggagtgattacgacatggttacctttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagaatgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagaccattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaacatcatagtgccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtataaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagagaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccaatactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacggtacagggcccgagccttgattttgctctctccctactgagaaggaacgttaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggcaaaactatttggatcgagcataaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaacccttatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaagggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatatcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggccagtagtttgaatgattcagtgcacctcagaatggctttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctctgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggtccttagggagatagggtatagtgaaggggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----a------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC954662.1_Enterovirus_A71_isolate_Anhui2007_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcgggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---atctttatactggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----ttcatt-ggtttcgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacaacgctccggctctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcagctaacattatagttggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataagccaactcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacagttccattacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccaatggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgactctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccactgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaagtggaccgtggcaatccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattagaagtcaccttcatgtttactgggtccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcaaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagtagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttaaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcacaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgtcgcgtgcacacccaccggggaagttgtcccacaattgctccaatacatgtttgtgccacctggagcccctaagccagattctagggaatccctcgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttagaatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggtaa----ctccattaagccaactggcgccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacgggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacctagcctgatctatgtagaggctagcgagtattacccagctaggtaccagtcacacctcatgctcgcacagggccactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggttttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacgggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcggttgagaaaattttgaaaaatcttattaaattaatctctgcactggtgattgtgatcagaagtgattacgacatggttacccttactgcaaccctagcgctgataggttgtcatggtagcccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggaaaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgttcgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacatcgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcacttcgacggctacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaaatttgtcatcgcatccactaatgccagtaatatcatagtgccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggcagactggatgcagggcgggccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggacacggtagtttcagaacttattagggaatacagcaataggtccgccattggtaacacaatcgaggctcttttccaaggtccacctaagttcaagccaattaagatc---agtcttgaagagaaaccagccccagacgctattagcgatctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgattttgccctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgagttagtggatgagcaaggagtcaacttggaattaaccctcatcactcttgacaccaacgaaaagtttagggacatcaccaaattcattccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcccacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtgggggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacagggtttttgcgcgggtctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaaggctcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatattttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctattctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaacacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgctctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctatatggacaaatatggtcttgatcttccttactccacctatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgattgaggccagtagtttaaatgattcagtgtacctcagaatggctttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaaggggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgattaacaacattatcatcagagcactgctcataaaaacatttaagggcattgatttggatgagctcaacatggtcgcttatggagacgatgtgctcgctagttatcccttcccaattgattgcttggagctagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttacccgatgagcagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcgatccttgtgcctcctagcatggcataatggtaagcaagaatatgaggagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>EU753365.2_Human_enterovirus_71_strain_518-03F/SD/CHN/07_partial_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgtaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---atctttatactggctgcttatggtgacaattaaa-------gaattgttgccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggtgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctatcctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaagtggaccgtggcaatccaccttgctgggtcagttgtgcggatactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgagcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcacgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccactggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcacaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggggagttgtcccacaactgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatccctcgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttagaatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---tactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacattgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacacctcatgcttgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggcttcgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggtagcccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgatggctacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagac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>EU753384.2_Human_enterovirus_71_strain_522-04T/SD/CHN/07_partial_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--cttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttgccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttgactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgcagtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccatacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattggttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataaccatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagatgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtagagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaagtgggccgtggcaatccaccttgctgggtcagttgtgcgggtactatacccagtggtcaggatcattggaagtcaccttcatgtttactggatctttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagactaattatgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctacagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggctatgccaactgggacatagatataacaggttacgcacaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggggagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatccctcgcatggcaaaccgccactaacccctcagtttttgtcaagttgtcagaccctccagcacaggtttcagtgccattcatgtcacccgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttagaatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatatatgtgggtaactttagagtggtcaaccgtcaccttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctaatctatgtagaagctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtattcttagatgtcaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaattaatctctgcactggtgattgtgatcagaagtgactacgacatggtcacccttactgcaaccttagcgctgataggttgtcatggtagcccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcactttgacggctacaagcaacaggtggtcacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtgccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggcagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaacttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtagtttcagagcttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacctaagttcaggccaattaggatc---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgtcagtactgc-agggatcaaggctggatcattcccgaaactcccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtatacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacggcaacagtacagggcccgagccttgattttgctctctccctactgagaaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggcaaaaccatttggattgagcacaaactcgtgaacgttcttgatgcagttgagttagtggatgaacaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtaggtgacgttgtgcagtatggcttcttgaatctcagtgggaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaaggctcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatatcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggcaattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggatgtgagtaaaatgaagttctacatggacaaatatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgactgattgaggccagtagtttaaatgattcagtgtacctcagaatggctttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgcaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgagggagcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcggggacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgagctcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtctccttgctttaatgaggttaattggggtaatgcgacctttctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aataac--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX678878.1_Human_enterovirus_71_strain_FY17.08-7/AH/CHN/2008_complete_genome
------------------ttaaaa--c-g-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttgca---c--cccc---t---cccc-c------ag-t-gaaacttagaag--------------caaca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggtttcgtaccgt-----taacctt--------------gaaatctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcacaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtctccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaaggggtggtactggaagttcccggatgtgttaactgaaactggggtttttggccaaaatgcacaattccactacctctatcgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcacttctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatatattaacgcactgccttttgattctgccttaaaccattgcaattttggtctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctaaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggcgagctgtgtgcggtgttcagggccgatcctgggcgaaatgggccgtggcaatccaccttgctgggtcagttgtgcggatactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagttagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagcccttactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctcccacttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcacaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccactgggggagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagatcctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaattacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatctactaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagtgagtattacccagccaggtaccagtcacatctcatgctcgcacagggccactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtccactggtggcaatgggctcgttggcttcgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcgagggaggttgaagctctcaaaaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtaattgtgatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgccatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggcatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgccaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaagttgaattcctaaataacttgaagcagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------tttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccggattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgacggttacaagcaacaggtagttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatctaccgtagacttcattccaccaatggcatctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatattatagtgccaacagtgtctgattctgacgccattcgccgcagattctacatggactgtgacattgaggtgacagactcgtacaaaacagatctaggtagattggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgatgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggcccacccaagtttaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggttggatcattcctgaaactcccaccaacgtagagcggcacctcaacagagcggtacttgtcatgcaatctatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggcgcgtattctggtgctcctaagcaagtgcttaagaaacctactcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctactgagaaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggacatcaccaaattcatcccagaaagtatcagcactgccagcgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcaatatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgagcaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatgtcttcgagggaagtaaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctccaagtatgtgggtaatacactacatgaacctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaacacctctcagatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctacagcgccctggggataaagaaaagagacatcttagaccctaccactagggacgtgagtaaaatgaagttctacatggacaaatatggccttgatcttccttactccacttatgtcaaggacgagctgcgctcggttgataaaattaagaaagggaaatcccgtctgattgaggccagtagcttaaatgattcagtgtacctcagaatggctttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaaggggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcattgctcataaaaacatttaagggcattgatttggacgaactcaacatggtcgcttatggagacgatgtgctcgctagttatcccttcccaattgattgcctggaactagcaaagactggcaaggagtatggtctgaccatgactcctgcagacaaatctccttgttttaatgaggttaattggggcaatgcgaccttcctcaaaagaggctttttacccgatgaacagttcccatttctgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX678882.1_Human_enterovirus_71_strain_SD07-1/SD/CHN/2007_complete_genome
------------------ttaaaa--c-g-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagcg-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtgccgt-----taacctt--------------gaaatctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtatacacgtgcagtgcaatgctagtaaattccaccaaggagcacttctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtatgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatatattaacgcactgccttttgattctgccttgaaccattgcaattttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggcgagctgtgtgcggtgttcagagccgatcctgggcgaaatgggccgtggcaatccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagttagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagacctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatccctcgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatctcgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaattacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaggacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggcttcgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtaattgtgatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgccatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggcatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccggattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagac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>HM003207.1_Human_enterovirus_71_strain_87-2008_Xian_Shaanxi_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcgggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagcgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---atctttatactggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----ttcatt-ggtttcgtaccat-----taacctt--------------gaagtctgtgacc-acccttaactacatcttgacccttaacacagctaaa-----catgggttcgcaagtatctacacaacgctccggctctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaggtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcagctaacattatagttggttatggtgagtggccttcctactgctcggattccgacgctacagcagtggataagccaactcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaagt------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttggtcaaaatgcacagttccattacctctatcgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacag------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgactctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagttgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaagtggaccgtggcaatccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattagaagtcaccttcatgtttactgggtccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggcccttggcccaaggaccgggcaacagccatgttgggcacgcacgttatctgggattttgtcctgcaatcgtctgttatcctggtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactataccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcatgagtagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgggccacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttaaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcacaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaattgctccaatacatgtttgtgccacctggagcccctaagccagattctagggaatccctcgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcagtggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcgcgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttagaatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggtaa----ctccattaagccaactggtgccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttaaagtggttaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccgaggttgtgacacgattgcccgttgcgattgccagacgggggtgtactactgtaactcgaggagaaaacactacccagtcagtttatcaaaacctagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcatacctcatgctcgcacagggccactcagaaccaggagattgtggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggttttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacgggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcggttgagaaaattttgaaaaatcttattaaattaatctctgcactggtgattgtgatcagaagtgattacgacatggttacccttactgcaaccctagcgctgataggttgtcatggtagcccttgggcttggatcgaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaacgacatggccaatgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggaaaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgttcgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacatcgaattggacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcatttcgacggctacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaaatttgtcatcgcatccactaatgccagtaatatcatagtgccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggcagactggatgcagggcgggccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggacacggtagtttcagaacttattagggaatacagcaataggtccgccgttggtaacacgatcgaggctcttttccaaggtccacctaagttcaagccaattaggatc---agtcttgaagagaaaccagccccagacgctattagcgatctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgattttgccctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcattttaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggcaaaacgatttggattgagcacaaactcgtgaacgtccttgatgcagttgagttagtggatgagcaaggagtcaacttggaattaaccctcatcactcttgacaccaacgaaaagtttagggacatcaccaagttcataccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtccgggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcccacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacagggtttttgcgcgggtctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagtccaataaggaaactggaaggctcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatatcttcgagggaagtaaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaacacctctctaatgagcatggaggaggcctgctatggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgcactggggataaagaaaggagacatcttagaccctaccaccagggacgtgagtaaaataaagttctacatggacaaatatggtcttgatcttccttaccccacctatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgattgaggccagtagtttaaatgattcagtgtacctcagaatggctttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagcccagtgtggttcagagcattagaattggttcttagggagatagggtatagtgaaggggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgattaacaacattatcatcagagcactgctcataaaaacatttaagggcattgatttggatgagctcaacatggtcgcttatggagacgatgtgctcgctagttatcccttcccaattgattgcttggagctagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggttttttacccgatgagcagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaagcactcaagatcatgtgcgatccttgtgcctcctagcatggcataatggtaagcaagaatatgaggagtttgtgagcacaattaggtccgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctataa-------------------------tcac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaa------------------------------------------------------------------------------------------------------------------------------------------
>GU366191.1_Human_enterovirus_71_strain_Henan10-08-China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcac--gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaaacca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgacccttaacatagctgaa-----catgggttcgcaagtctccacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccactataaactacaccaccattaattattacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgagatggcagcgccactgaagtccccgtccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggtaactccaccatcaccacgcaagaagcggccaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctatcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagttacaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgatcaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaactttcaccccaccccgtgtatccatatacctggtgaggttaggaacttgttagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcaatccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggggtgtttgactactacaccacggggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcacccacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgacttgatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagactactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttaaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccttcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttacgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctcccgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagtctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagagctatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagcccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgatatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaaccagatctcaaacttggaacaatctgctgcctcacaagaagaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgttatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggttcaccaggcactgggaagtctttagccactggtatcattgctcgagcaatcgctgataagtaccattccagcgtgtactcgcttccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatctgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagactttattccaccaatggcttctcttgaggaaaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtgccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagagcttattagggaatacagcaataggtccgccattggcaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaaactcccaccaacgtagagcggcaccttaacagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctactgagaaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgaaaagtttagggacatcaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgttccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaattttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatatcttcgagggaaataaggaaccagctgtcctgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtaggaaatacactacacgaacctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagatcctaccaccagggacgtgagtaaaatgaagttctacatggacaaatacggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgactgattgaggccagtagtttaaatgattcagtgtacctcagaatggctttcggtcacttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcgctctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaaggggcagtctcactcattgagggaatcaaccacacgcatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtctccttgcttcaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctaaac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC436268.1_Enterovirus_A71_isolate_V07-2231013_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactttggtaccccggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-c-gaaacttagaag--------------cagca-aaccac-gatcaa-cagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcagagagcttcgttcggca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----tgacctt--------------gaagtctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgagaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaaccctgttaaagacatcttcactgaaatggcagcgccactaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaggaagcggctaatattatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggacaaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtattggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtacagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagacccaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaatgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatattcctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcaatccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagtaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagttagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacaggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagcgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccacacttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttacgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatccctcgcatggcaaaccgccactaacccctcagtttttgtcaaactgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtatcagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtatctactggtggcaatgggctcgttggcttcgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtatccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaacaattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgacttgtgtcagaatcccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagttcgtcatcgcatccactaatgccagtaatatcatagtgccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggacgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtagatacggtagtttcagaacttattagagaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcggtgctcgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtacttaagaaacctactcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctactgagaaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaacattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgttcgtcccggtgggtgacgttgtgcaatatggcttcttgaatcttagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggtagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaatacagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatatcttcgagggaaacaaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagatcctaccaccagggacgtgagtaaaatgaagttctatatggacaaatatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaagtcaagaaagggaagtcccgcctgattgaggccagtagtttaaatgattcagtgtatctcagaatggctttcggtcatttgtatgaggctttccacgctaatcctgggacggtaactggatcagccgtggggtgtaaccctgacacattctggagcaagctaccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaaggagcagtctcacttattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgctcggtgggatgccctcaggctgttcgggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtctccttgctttaatgaggttaattggggtaatgcgacctttctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggatgcacggaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtagggagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ713137.1_Human_enterovirus_71_strain_Shanghai_036-2009_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca---c--cccc---t---cccc-c------ag-t-gaaacttagaag--------------caaca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatctgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggtttcgtaccgt-----taacctt--------------gaaatctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagtctcctatgctgccacagcaggcaaacagggtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtctccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaactgtgggagaaat------------------cgtccaaggggtggtactggaagttcccggatgtgttaactgaaactggggtttttggccaaaatgcacaattccactacctctatcgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagtacttctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatatattaacgcactgccttttgattctgccttgaaccattgcaattttggtctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctaaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggcgagctgtgtgcggtgttcagggccgatcctgggcgaaatgggccgtggcaatccaccttgctgggtcagttgtgcggatactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctatcggtaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggatttttggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagttagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctcccacttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcacaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagttttcgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcctatcaatggttttatgacgggtatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataatatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtatcctttagtggttaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctatttaaagccaacccaaattatgctggcaa----ctccattaagccgactggtgccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaatcgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacgattgcccgttgtgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttgttaaactaatctctgcgctggtgattgtgatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggctaacgccgctaaggggttagagtgggtctccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaggaggaccttgaagttatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagtgtgtactcgcttccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgccaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtgccaacagtgtctgactctgacgcaattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtagtttcagaacttattagggaatacagcaatagatccgccattggcaatacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaacccccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgttatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacggcaacagtacagggcccaagccttgattttgctctctccctactgagaaggaacgtcaggcaagtccaaacagaccaagggcatttcaccatgttaggagttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggacatcaccaaattcatcccagaaagtatcagcactgccagcgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcaatatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgagcaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatgtcttcgagggaagtagggaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctccaagtatgtgggtaatacactacatgaacctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaacacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatggcgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagctctacatggacaaatatggccttgatctcccttactccacttatgtcaaggacgagctgcgctcggttgataaaattaagaaagggaaatcccgtctgattgaggccagtagcttaaatgattcagtgtgcctcagaatggctttcggtcatctgtatgaggctttccacgcaaatcctaggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaaggggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcattgctcataaaaacatttaagggcattgatttggacgaactcaacatggtcgcttatggagacgatgtgctcgctagttatcccttcccaattgattgcttggaactagcaaagactggcaaggagtatggtctgaccatgactcctgcagacaaatctccttgttttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttacccgatgaacagttcccatttctgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatat-------------------------acac---------------ctcaaccc-taccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtgaatttgt-ta-taacc-a-g-aatagg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ746493.1_Enterovirus_A71_strain_306A_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacttcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-ttacgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggtgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atcttcatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgatccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggctctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcaccgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataagccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattggaacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtatgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactaccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattagccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctaaaacctggcacaaatcaattcttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtattcatatacccggtgaagttaggaacttgctagagttatgccaggtggagaccattttggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcaatccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttaccctcgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattatgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggacgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcatgctctaccagca--------cccacaggccaggacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttaaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgtacacccaccggggaagttgtcccacagttgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatctctcgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcggtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgtgacacgattgcccgttgcgattgccaggcaggggtgtactactgtaactcgaggagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgtggtggtatccttagatgtcaacatggcgtcgtcggcatagtatctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagacgctttcgggacaggtttcactgacgcagtctcaagggaggttgaagctctcaagagctatcttatagggtctgaaggggcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattatgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagcccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtctccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaagcagttgcca-ctgctagagaatcagatctcaaatttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttttgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgacggttacaagcaacaggtggtcacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcatcccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtgccaacagtgtctgactctgatgctattcgccgcaggttctatatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaacttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaagccagccccagatgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaattcctaccaacgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggtccgagccttgattttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcactaatttcatccctgaaaatatcagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtatttcatgacatcttcgagggaaataaggaaccggctgtcttgcacagcaaagacccccgacttgaggtggattttgagcaggccctgttctctaagtatgtgggaaacactctacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagagattgatacctctcagatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttatccctatagtgccctggggataaagaaaagagatatcttagaccccaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggccagtagtttaaatgattcagtgtacctcagaatggctttcggtcatttgtacgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaattcaatgatcaacaacattattatcagagcactgctcataaaaacgtttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcacgtgcggtccttgtgcctcctagcatggcacaatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggccatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------a----------------------------------------------------------------------------------------------------------
>KC436271.1_Enterovirus_A71_isolate_V09-2225777_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tctccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggatttgtaccat-----taacctt--------------gaagtctgtgact-acccttaattatatcttgatccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaattcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcaccgagatggcagcgccactgaagtccccatctgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacacaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggacaaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgtaatgctagtaaatttcaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacag------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaacttcggcctattagttgtgcctattagcccactagactacgatcaaggagcgacgccagtaattcctataactatcacattggccccaatgtgttctgaattcgcaggccttaggcaggcagtcacgcaaggatttcccactgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtattcatatacccggtgaagttaggaacttgctagagttatgccaggtggagaccattttagaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtattcagagccgatcctgggcgaaatggaccgtggcaatccactttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgctatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttaccctcgtaataccatggatcagtaacactcattacagagcgcatgcccgagacggagtgtttgactactataccacagggttagtcagtatatggtatcagacaaattatgtggttccaattggcgcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatattctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcatgccctaccagca--------cccacaggtcagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgagattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttatgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacagttgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatccctcgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcggtgccattcatgtcacccgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataatatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgaaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgtgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcccagggtcactcagaacctggtgattgcggtggtatccttagatgtcaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacgggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggggcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggtcacccttactgcaaccttagcgctgataggttgtcatggcagcccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcttaaataacttgaagcagttgcca-ctgctagagaatcagatctcaaacttggaacaatccgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactggcaagtctctagccactggtatcattgctcgagcaatcgctgacaagtaccactccagcgtgtactcgcttccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtcattattctgtcaaatggtatccaccgtagac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>HM002485.1_Human_enterovirus_71_strain_BJ97_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttgca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------taatg-aaccac-gatcaa-tagcaggcataacgctccagttatgtctcga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-ccacgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagggcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgtggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccatagactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggtaacaccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaaggggtggtactggaagtttccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggggcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggtggtacagggacgg------aagatagtcatcccccttacaagcagactcaacccggtgctgatggcttcgagttgcaacacccgtacgtacttgatgctggcatcccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaatgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactatgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgctctgaattcgcaggtcttaggcaggcagttacgcaagggtttcccaccgagctgaaacccggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaggttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcaatccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactgggtccttcatggctaccggcaagatgctcatagcctacacaccgccagggggccctttgcccaaggaccgggcgactgccatgttgggcacgcacgtcatctgggattttgggctgcagtcgtctgttacccttgtaataccatggatcagcaatactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggacgctagtgatatcctgcagacgggtaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctcaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagttattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagctcctaagccagattctagggaatccctcgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcctatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcccaataatatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtatcctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctatttaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagtctgatctatgtaggggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgtcaacatggcgtcgttggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccctgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcctcctggctcaagaagttcaatgacatggctaacgccgctaaggggttagagtgggtttctaataagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaggaggaccttgaagttatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcacttccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatctgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaacgccagtaatatcatagtgccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagattcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtagtttcagaacttattagggaatacagcaatagatccgccattggcaatacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagaacggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgttatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccaagccttgattttgctctctccctactgagaaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggagttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaactctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaaggctcaacatcaatggaccaatccgcaccaagttagaacctagtgtattccatgatatcttcgagggaaataaggaaccagccgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggccttgatcttccttactccacttatgtcaaggacgagctgcgctcaattgataaaattaagaaagggaagtcccgtctcattgaggccagtagtttaaatgattcagtgtacctcagaatggcttttggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaaccacacacatcatgtgtaccgtaataagacctattgtgtacttggtgggatgccctcaggctgttcgggaacatctattttcaactcaatgatcaacaacattattatcagagcactgctcataaagacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcctaattgattgcttggagttagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtctccttgctttaatgaggttaactggggtaatgcgaccttcctcaaaaggggcttcttacccgatgaacagtttccatttttgattcaccctactatgccaatgagggaaatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>GQ231933.1_Human_enterovirus_71_strain_TW/70516/08_complete_genome
------------------ttaaaa--cag-c-t-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaatttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagtcgcggagcgcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctaccgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaagtctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcgggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacattttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaagt------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaatttcactacctctatcgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggtggtacagggacgg------aagatagtcaccccccttacaaacagactcaacccggcgccgatggcttcgagctgcaacacccatacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctatcagcccactggattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacacaagggtttcccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgtcaggtggagaccattctggaggttaacaa----------cgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcagtgttcagagccgatcctgggcgaaatggaccgtggcaatccaccttgctgggtcagttgtgtgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgattactacactacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgccagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccacccttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagttattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccgcctggagcccctaagccagattccagggaatccctcgcatggcaaaccgccaccaacccctcggtttttgtcaagctgtcagaccccccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatattgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcgaactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgaggatgaagcacgttagggcttggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggcaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatctggggccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgcgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagtctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagagcctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtccactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgccttcgggacaggcttcactgacgcagtctcaagggaggttgaggctctcaagaattatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattatgacatggttacccttactgcgaccttagcgctaataggttgtcatggcagtccttgggcttggattaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaagggttagagtgggtttccaacaagatcagtaaatttattgattggctcaaggagaaaataataccagcagccaaagagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaacgtgtcgtacctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtccctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtatactcgcttccaccagacccagatcattttgacggttacaaacaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttcccttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaacatcatagtgccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgttctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtagtctcagaacttatcagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagtacaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtggtggcggttgtctcgttggtatatgtcatctacaagctctttgcaggatttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacggtacagggccctagccttgattttgctctctccctattgagaaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagagcctagtgtattccatgatatcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaagaggcagctcttcactatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggcactgagaatcttgaggctattgatctacacactagtgcaggttacccctatagtgccctggggataaagaaaagagacattttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggtctcgatcttccttactccacttatgtcaaggacgagctgcgctcagttgataaaattaagaaagggaagtcccgtctgattgaggccagcagtttaaatgattcagtgtatctcagaatggctttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagtcttagccctgtctggttcagagcattagaattggtccttagggagatagggtatagcgaaggggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgcaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggggacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtctccttgctttaatgaggttaattggagtaatgcgaccttccttaaaaggggctttttacccgatgaacagttcccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcacgtgcggtccttgtgcctcctggcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctatcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttgtttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-g-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaa-----------------------------------------------------------------------------------------------------------------------------------------
>FJ828519.1_Human_enterovirus_71_isolate_BJ08_complete_genome
----------------------------------------------cccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca---c--cccc---t---cccc-c------ag-t-gaaacttagaag--------------cacca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-ttgcgcggttgaaggagaaaacgttcgtcatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgcgtttcc--tttt---atctttatattggctgcttatggtgacagttaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtc-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccaccg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaatcaactattggcaactccactatcactacgcaagaagcggctaatatcatagtcggttacggcgagtggccttcctactgctcggattctgacgccacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggatactaaattgtgggagaagt------------------cgtccaaaggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagctgcagcacccatacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccctgaaccattgcaactttggcctgttagttgtgcccattagcccactagattacgaccaaggagcgacgccagtaattcctataactatcacactggccccaatgtgttccgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggtgtttcagcacccattctaccaaacttccaccccaccccgtgcatccatatacctggtgaagttaggaacttgctagagttgtgccaggtggagaccatcctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcaatccaccttgctgggtcagttgtgtgggtactacacccaatggtcaggatcattggaagtcacctttatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtaccagacaaactacgtggttccaattggggcgcccaatacagcctatataatagcgctagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggggcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttgaaggtacgac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatcccccgcatggcaaaccgccaccaacccctcggtttttgtcaagctgtcggaccccccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttaccaatggttttacgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggtatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgttagggcgtgggtacctcgcccaatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacatcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggagccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagttctcgcgacttgctcgtatcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagcttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcaccgggtcactcagagcctggcgattgcggtggtatccttagatgccaacacggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcctgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-agtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaggctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcctaaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattatgacatggttacccttaccgcgaccttagcgctgataggttgccatggcagtccttgggcttggatcaaagctaaaacagcttctatcttaggtatccctatcgctcaaaaacaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttctaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaagtaacttgaaacagttgcca-ctgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttttgtcgcaagttccaaccgctatacgccacggaagctaaaagggtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaaatctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgacggttacaaacaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagac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>FJ360545.1_Human_enterovirus_71_isolate_GZ-08-02_complete_genome
------------------ttaaaa--cag-c-t-gtgggttg-t-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgttccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgact-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccaccg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggatactaaattgtgggagaagt------------------catccaaaggatggtactggaagttcccggatgtgttaactgaaactggagtttttgggcaaaatgcacaattccactacctctaccgatcagggttttgcattcacgtgcagtgcaatactagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagctgcagcacccatacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgagaaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaattcctataactatcacattggccccaatgtgttccgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagttgaaacctggcacaaatcaatttttaaccactgatgatggtgtttcagcacctattctaccaaacttccaccccaccccgtgcatccatatacctggtgaagttaggaacttgctagagttgtgccaggtggagaccatcctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcaatccaccttgctgggtcagttgtgtgggtactacacccaatggtcaggatcattggaagtcacctttatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtaccagacaaactacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttgaaggtacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagcttttcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggtgcccctaagccagattccagggaatccctcgcatggcaaaccgccaccaacccctcggtttttgtcaagctgtcagaccccccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggtacgttctcagtgcggactgtaggaacctccaaatccaagtaccctttggtggttaggatttacatgagaatgaagcacgttagggcgtgggtacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggagccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagagcctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcctgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaggctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaattaatctctgcactggtgattgtgatcagaagtgattatgacatggttacccttaccgcgaccttagcgctgataggttgtcatggcagcccttgggcttggatcaaagctaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaattcattgattggcttaaggagaaaataataccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttttgtcgcaagttccaaccgctatacgccacggaagctaaaagggtctataccctagagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcatttcgacggttacaaacaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgccaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccaccaatgccagtaacatcatagtgccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgtagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaaattcaggccaattaggatt---agtcttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtggagcgacaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaaacaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctgctgagaaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatctgggttgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcatatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagattcagtgggttaagcccaataaagaaactggaagactcaacattaatgggccaacccgcaccaagttggaacctagtgtattccatgatatcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactgcatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaattagaaatcaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggctacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggccttgatctcccttactccacttatgtcaaggacgagctgcgctcaattgataaaataaagaaagggaaatcccgtctgattgaggccagtagtttaaatgattcagtgtacctcagaatggctttcggtcatttgtatgaggctttccacgcaaatcctgggacaataactggatcagccgtggggtgtaaccccgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggtccttagggagatagggtatagtgagggggcagtctcactcattgagggaatcaaccacacacatcatgtgtaccgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacgtccatcttcaactcaatgattaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggcaaggagtatggtctgaccatgacccctgcagataagtctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccccactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaatactcaagaccacgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtgggaagagcgttggctatcccaaattacgaaaatcttagacgcaattggctcgaattatttt-----agaggctatat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX244182.1_Human_enterovirus_71_strain_SDLY1_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca---ccccccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aactac-gatcaa-tagcaggcataacgctccagttgtgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagctagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----tactta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggtaaacagagcctcaagcaggatccagacaagtttgcaaatccagttaaagacatcttcactgaaatggcagcgccattgaagtctccatccgctgaggcatgtggatacagtgatcgagtagcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggctatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtctcagtgaacaggttttacacattggacactaaattgtgggagaagt------------------cgtccaagggttggtactggaagttcccggatgtgttaactgaaactggggttttcgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcacttctagtcgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggtgccgatggcttcgagctgcaacacccatacgtgcttgacgctggcatcccaatatcacagctaacagtgtgcccacaccagtggattaacttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaaggatttcccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcgcctattctgccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcaatccaccttactgggtcagttgtgtgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttactcttgtaataccatggatcagcaacactcattatagagcgcatgcccgggatggagtgtttgattactataccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcttatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagggcgggattagtcggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcacaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggggaattgtcccacaattgctccaatacatgtttgtgccacctggagcccctaagccagattccagagaatccctcgcatggcaaaccgctaccaacccctcggtttttgtcaagctgtcagaccccccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttaccaatggttttatgatgggtatcccacattcggagaacacaaacaggagaaagatcttgagtatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccccttagtggttaggatttacatgagaatgaagcacgttagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtatcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtaccactgcaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagagcctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaaa-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgatatggctaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgccaaggggttagagtgggtttccaacaagattagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctactagagaaccagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagccca---------cttttgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcactttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcatcccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaacatcatagtgccaacagtgtccgattctgacgctattcgtcgcaggttctacatggactgtgacattgaagtgacggattcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcaggtacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaattgaggctcttttccaaggtccacccaaattcaggccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgtcagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacggtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacccgttcttcgcacagcaacagtacagggccctagccttgattttgctctctccctactgagaaggaacgtcaggcaagtccaaacagaccaggggcacttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatctggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggggagatccagtgggttaagcccaataaagagactggaagactcaacattaatggaccaacccgcactaagttggagcctagtgtattccatgatatcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgttacggtactgagaaccttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagagacgtgagtaaaatgaagttctacatggacaaatatggccttgatcttccttactccacttatgtcaaggacgagctgcgctcaattgataaaattaagaaagggaaatcccgtctggttgaggccagtagtttaaatgattcagtgtacctcagaatggctttcggtcatttgtatgaggctttccacgcaaaccctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattctgctccctggttcactctttgcctttgactactcaggttacgatgctagccttagccctgtctggttcagagcactagaattggtccttagggagatagggtatagtgaaggggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaatatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggcaaggagtatggtctgactatgacccctgcagataagtctccttgcttcaatgaggttaactgggctaatgcgaccttcctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagaccacgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacgt-g-actg--------gtgggggtaaatttgt-ta-tagcc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ607336.1_Human_enterovirus_71_strain_28/SHENZHEN/08/China/HFMD/2008_complete_genome
------------------ttaaaa--cag-c-t-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcgagcactctggtacctcggtacctttgtgcgcct-g-ttttaca-------ccc---c---cccc-c------ag-t-ggaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttgtgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctgatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccag--tgtgtaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaggtgtccgcacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgggtggcgcaattgactattggcaactctaccatcaccacgcaagaagcagctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgatgctacagcagtggataaaccaacgcgcccggatgtttcagtaaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaaaggatggtactggaagttcccagatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcacttctagtcgctgtcttaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacctggcgccgacggcttcgagttgcaacacccgtatgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccaatggattaatttgaggaccaacaattgtgctacaataatagtaccatacattaacgcactgccttttgattctgccctgaaccattgcaactttggcctattagttgtgcctattagcccactagactatgaccagggagcgacgccagtaatccccataactatcacattggccccaatgtgctctgaattcgcaggtcttaggcaggcagtcacgcaaggatttcccaccgagttgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccactccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgttttccggtctcagcacaagcag------ggaaaggcgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcaatccaccttgctgggccagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttacccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagttagtatttggtatcagacaaattacgtggttccaattggggcgcccaacacagcttatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggacgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcgtcatcaaatgctagtgacgagagcatgatagagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagtagagcaggattagttggggagatagatctccctcttgtaggcacaac-taacccaaatggttatgctaattgggatatagatataacaggttacgcgcaaatgcgtagaaaggtggaactattcacctacatgcgttttgatgcagaattcactttcgttgcgtgcacacccaccggggaagttgttcgacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcatggcaaaccgccaccaatccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtaggaacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaacttcagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagttctcgcgacttactcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgccattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaaccaggtgactgcggtggtatccttagatgccaacatggcgtcgtcggtatagtctctactggtggtaatgggctcgttggctttgcagacgtcagggatctcttgtggttggatgaagaagctatggagcagggcgtatccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaagccctcaagaactatcttatagggtctgaaggagcagttgagaaaatttcgaaaaatcttgttaaactaatctctgcactggtgattgtgatcagaagcgattacgacatggttacccttactgcaaccttagcgttgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtattcctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaagatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatttcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctggccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctagagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattatcaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatctgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagac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>JQ681218.1_Human_enterovirus_71_strain_H8-1_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acctactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacactatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgtcaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattacatcttgacccttaacacagctaaa-----catgggctcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgatgctacagcagtggataaaccaacgcgcccggatgtctcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccggtcagggttctgtattcacgtgcaatgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaccatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgcgctacaataatagtgccatatatcaacgcactgccttttgattctgccttgaaccattgcaacttcggcctattagttgtgcctattagcccattagattacgaccaaggagcgacgccagtaatccccataactatcacattggccccaatgtgttctgaatttgcaggccttaggcaggcagtcacgcaagggttccccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagccta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgaccctgggcgaaatggaccgtggcagtccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcgctggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctacacaccaccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacgaattacgtggttccaattggggcgcccaacactgcctatataatagcattagcggcagcccaaaagaacttcaccatgaagttgtgcaaggatgctagtgaaatcctacagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcacacaagctctaccagca--------cccacaggtcagaacacacaggtgagcagccatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacggctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctcccccttgaaggcacaac-taacccaaatggttatgctaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacttacatgcgctttgatgcagagttcactttcgttgcgtgtacacccactgggcaagttgtcccacaattgctccaatacatgtttgtgccacctggagcccctaagccagattctagggaatccctcgcgtggcaaaccgccaccaacccttcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacccgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttttcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaaacacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgtacagcgat---cactac---------------------------------------tcttgga------------------------------------------aaatttgggcaacagtctggggccatttatgtgggtaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactactgtaattcgaagagaaaacactacccagtcagtttttcaaagcccagcctgatctacgtagaggccagcgagtattacccagccaggtaccagtcacacctcatgctcgcacaaggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaacgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaagaagctatggagcagggcgtgtccgattacatcaag-ggtctcggagatgccttcgggacaggcttcactgatgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgagggggcagttgagaagattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcagaagcgattacgacatggttacccttactgcaaccttagcactgataggttgtcatggctgtccttgggcttggattaaagccaaaacagcttctatcttgggcatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggtcaacgctgctaaagggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaagttgagttcctaaataacctgaaacagttgcca-ctgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaagaccttgaagtcatgttcgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccactatacgccacggaagctaagagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcacctggcacagggaaatctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagtgtgtattcgctcccaccagacccagatcattttgacggctacaaacaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttcccttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccactaacatcatagtgccaacagtgtctgattctgacgctattcgccgcaggttctacatggagtgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtccaaagtcagatacagtgtggacacggtagtttcagaacttattagggaatacagtaataggtccgccattggcaatacaatcgaggctcttttccaaggtccacccaagttcaggccaattaagatt---tgccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggttggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcagtgcttgtcatgcaatctatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtactctggtgctcccaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctgctgaggaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggtaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacttggaattaaccctcattactcttgacaccaacgagaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgatgttgtgcggtatggcttcctgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaagttatcggcattcacattggtggcaacggcagacaaggtttctgtgcgggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggtcaagcccaacaaagaaactggtagactcaacatcaatgggccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaggagccagctgtcttgcacagtaaagacccccggctcgaggtagattttgaacaggccctgttctccaagtatgtgggaaatacactatatgagcctgacgagtacatcagagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggccagtagtttgaatgattcagtgcacctcagaatggctttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccatttttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggtccttagggagatagggtatagtgaaggggcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtctccttgctttaatgaggttaattggggtaatgcgacctttctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>GU196833.1_Human_enterovirus_71_strain_Henan1-09-China_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------agtatcaatagactgc-tcgtgcgattgaaggagaaaacgttccttatcaggctagatacttcgggaaacc-tatcagcagcatgaaagatgcggagaggttcgttcagca--ctc-cccca---gtgtagatcaagtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacatgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattgaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccac-----taacctt--------------gaagactgtgacc-accctcaattatattttgacccttaacacagctaaa-----catgggttcgcaagtatctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattattacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaggatatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaaccattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttacggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagtttccggatgtgctaactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttttgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctgccagagtacgtcattgggacagtggcaggcggtacagggatgg------aagacagtcaccccccttacaaacagactcaacctggtgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatccctatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgcgctacaataatagtgccatatatcaacgcactgccttttgattctgccttgaaccattgcaacttcggcctattagttgtgcctattagcccattagattacgaccaaggagcgacgccagtaatccccataactatcacattggccccaatgtgttctgaatttgcaggccttaggcaggcagtcacgcaagggttccccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagccta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgaccctgggcgaaatggaccgtggcagtccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcgctggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctacacaccaccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacgaattacgtggttccaattggggcgcccaacactgcctatataatagcattagcggcagcccaaaagaacttcaccatgaagttgtgcaaggatgctagtgaaatcctacagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcacacaagctctaccagca--------cccacaggtcagaacacacaggtgagcagccatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacggctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctcccccttaaaggcacaac-taacccaaatggttatgctaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacttacatgcgctttgatgcagagttcactttcgttgcgtgtacacccactggggaagttgtcccacaattgctccaatacatgtttgtgccacctggagcccctaagccagattctagggaatccctcgcgtggcaaaccgccaccaacccttcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacccgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttttcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaaacacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttgga------------------------------------------aaatttgggcaacagtctggggccatttatgtgggtaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactactgtaattcgaagagaaaacactacccagtcagtttttcaaagcccagcctgatctacgtagaggccagcgagtattacccagccaggtaccagtcacacctcatgctcgcacaaggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaacgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaagaagctatggagcagggcgtgtccgattacatcaag-ggtctcggagatgccttcgggacaggcttcactgatgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgagggggcagttgagaagattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcagaagcgattacgacatggttacccttactgcaaccttagcactgataggttgtcatggcagtccttgggcttggattaaagccaaaacagcttctatcttgggcatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgagttcctaaataacctgaaacagttgcca-ctgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaagaccttgaagtcatgttcgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccaaccactatacgccacggaagctaagagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcacctggcactgggaaatctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagtgtgtattcgctcccaccagacccagatcattttgacggctacaaacaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttcccttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccactaacatcatagtgccaacagtgtctgattctgacgctattcgccgcaggttctacatggattgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtccaaagtcagatacagtgtggacacggtagtttcagaacttattagggaatacagtaataggtccgccattggcaatacaatcgaggctcttttccaaggtccacccaagttcaggccaattaagatt---tgccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggttggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcagtgcttgtcatgcaatctatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtactctggtgctcccaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctgctgaggaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggtaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacttggaattaaccctcattactcttgacaccaacgagaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgatgttgtgcagtatggcttcctgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaagttatcggcattcacattggtggcaacggcagacaaggtttctgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggtcaagcccaacaaagaaactggtagactcaacatcaatgggccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaggagccagctgtcttgcacagtaaagacccccgactcgaggtagattttgaacaggccctgttctccaagtatgtgggaaatacactatatgagcctgacgagtacatcagagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaacacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcaaactagtgcaggctacccctatagtgccctggggataaagaaaagagacatcttagatcctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagctgcgctcaattgataagattaagaaagggaagtcccgtctgattgaggctagtagtttaaatgattcagtgtacctcagaatggcttttggtcatttatatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagcctcagccctgtctggttcagagcattagaattggtccttagggagatagggtatggtgaagaggcagtctcactcattgagggaatcaaccacacacaccatgtgtatcgtaataaaacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaagacatttaagggtattgacttagatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatccctttccaattgattgcttggagttagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtctccttgctttaatgagattaattgggataatgcgaccttcctcaagaggggctttctacccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccatccgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccgaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctacac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-tacac-a-a-aat-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ456306.1_Human_enterovirus_A_strain_GZ2010-134_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcgagcactctggtatctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatgacgctccagttatgtcttga-tcaagcacttctg-tctccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccggacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaattccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcctggatgtttcggtgatcaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattgcactacctcttccgatcagggttctgcatccacgtacagtgcaatgccagtaaattccatcaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggggcgacgccagtaatccctataactattacattggccccaatgtgttttgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtattcacatacctggtgaggttaggaacctgctagagttatgccaggtggaaaccattctagaggttaataa----------tgtgcccacgaatgccaccagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccgtggcagtccaccttattgggtcagttatgcggatactacacccaatggtcaggatcgttggaagtcaccttcatgtttactggatccttcatggctaccggcaaaatgctcatagcctatacaccgccaggaggccctctgcccaaggaccgggcgactgccatgttgggcacgcacgttatctgggatttcgggctgcaatcgtctgttaccctcgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagttagtatatggtatcagacaaattatgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagacagcgtgagcagagccctcactcacgctttaccagca--------cccacaggccagaacacacaggtgagtagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcgaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattggttggagaggtagatctccctctcgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggctacgcgcaaatgcgtagaaaggtagaactattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatctcttgcatggcaaaccgccactaacccctcagtttttgtcaagctatcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttttcagtgcggactgtggggacttccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggcgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aagtttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatctcgtttgggaagacagctctcgcgacttgctcgtgtcatccactactgctcaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgtggtggtatccttagatgccaacacggcgtcgtcggcatagtgtctactggtggcaacgggctcgttggctttgcagacgtcagggatctcttgtggttagatgaagaagctatggagcagggtgtgtccgattacatcaag-ggtctcggagatgcttttgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttaaagaatcttattaaactaatttctgcactggtgattgtgatcagaagtgattacgacatggtcaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaaacagagcgcctcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggatcttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctgtacgccacggaagctaaaagagtttatgccctggagaagagaataaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactggaaagtctctagccactggtatcattgcacgagctattgctgataagtaccactccagcgtgtactcgctcccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaagagaagggagtttctttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgactctgacgcaattcgccgcagattctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagctgctaaactgtgctctgaaaataacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggacacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaatcaggatt---agccttgaagaaaaaccagccccagacgctattagtgatctccttgctagcgtagatagtgaagaagtgcgccaatactgc-agggatcaaggctggattattcctgaaactcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacggtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttggcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaatttatcccagaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacaatgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcagtgggccaacccgtaccaagttagaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtatatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgctcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggtattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagtacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU254595.1_Enterovirus_A71_isolate_BJ14-1_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatgacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaaccacttcggaaaacc-tagtagcactatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctggttagtagtcctccggcccctgaatgcggctaatcccaactgtggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttttattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-actctcaattatatcttgacccttaacacagccaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgagaattcaaactcagccactg-agggttctactataaattacaccaccatcaattactataaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccgctgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattgactattggcaactccaccatcaccacgcaagaagcggctaacattatagtcggttatggtgaatggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagatgtgttaaccgaaactggggtttttgggcaaaatgcacagttccattacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaagttccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacgatagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacctggcgccgatggcttcgagttgttacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtaccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagattatgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttccgaattcgcaggccttagacaggcagtcacacaagggctccccactgagttaaaacctggcacaaatcaatttttaaccactgatgatggcgtctcagcacccatcctcccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagctatgccaggtggaaactatcctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtatttagagccgaccctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggtcctctgcctaaggaccgggcaaccgccatgttgggcacgcatgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagggcacatgcccgagatggagtgtttgactactacactacagggttagttagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgtaaggatgctagtgacattctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatcg---aaagttccat--------------------------aggggatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcgctccaagctgctgaaattggggcatcatcaaatgccagtgacgagagcatgattgagacacgctgtgttcttaattcgcacagcacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggctatgccaactgggacatagatataacaggttacgcgcaaatgcgcaggaaggtagagctatttacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccactgggcaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagactctagggaatctcttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctctgtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgttagggcatggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---aaccac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggccatctatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgatcgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagtgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgtggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggcctcggagatgcttttggaacaggtttcactgacgcagtctcaagggaggttgaagctcttaagaactatctcatagggtctgaaggagcagttgagaaaattctgaaaaacctcattaaactaatctctgcactggtgattgtgatcaggagtgattacgacatggttaccctcactgcgaccttagcgttgataggttgtcacggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaaaaagttcaatgacatggccaacgccgctaaggggttggagtgggtttccaacaagatcagcaaatttattgattggcttaaggagagaatagtgccagcagctagggagaaggttgaattcttaaataacttgaaacagctgcca-ctgctagagaaccagatctcaaacttggaacaatctgctgcttcacaagaggaccttgaagtcatgtttgggaacgtggcgtatttggctca---------cttctgtcgcaagttccaaccgctgtatgccacggaagctaaaagagtctatgccctggaaaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggtactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggctacaagcaacaggtggttacagtgatggatgatttatgtcaaaaccccgatgggaaggatatgtctttattttgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtctccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccgacagtgtctgattctgacgctattcgccgcaggttttatatggactgtgatattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaagcgttgcagcccgttagtgtgtgggaaagctatccaacttagagacaggaagtctaaagtcagatacagtgtggacacggtggtttcagaacttatcagggaatacagcaacaggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagtgacctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtggagcggcacctaaacagagcggtacttgtcatgcagtccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctttccctactgagaaggaacatcaggcaagttcaaacagaccagggccatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatatgggttgagcacaaactcgtgaatgtccttgatgcagttgagctggtggatgagcaaggagttaacctggaattaaccctcattactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcccacccatcgcaccatgatgtacaactttcccactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttattttgctagtgaacaaggagagatccagtgggttaagcccaatacagaaactggaagactcaacatcaatggaccaacccgcaccaaattagaacctagtgtattccatgacattttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaggaggcagccctccattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctatcgatcttcacactagcgcaggttacccttatagtgccttggggataaagaagagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggataagtatggccttgatcttccttactccacctatgtcaaggacgagttgcgctcgattgacaaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacacttgtacgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggctcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcagtctcactcattgaggggatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgctcgggaacgtccattttcaattcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatctggacgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtcttaccatgacccctgctgataaatctccgtgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagttcccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtgggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctgtat-------------------------acac---------------ctcaaccc-caccagaa----gtctggt------c-c-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcc-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU254596.1_Enterovirus_A71_isolate_BJ14-2_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata-------ccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatgacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagcatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaaccacttcggaaaacc-tagtagcactatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctggttagtagtcctccggcccctgaatgcggctaatcccaactgtggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atcctcttattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-actctcaattatatcttgacccttaacacagccaaa-----catgggttcgcaagtgtccacacagcgctccggttctcacgagaattcaaactcagccactg-agggttctactataaattacaccaccatcaattactataaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccactgaaatccccatccgctgaggcatgtggatacagcgatcgagtggcgcaattgactattggcaactccaccatcaccacgcaagaagcggctaacattatagtcggttatggcgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagatgtattaaccgaaactggggtttttgggcaaaatgcacagttccattacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaagttccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacctggcgccgatggcttcgagttgttacacccgtatgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtaccatacattaacgcactgccttttgattctgccttgaaccattgtaactttggtctgttagttgtgcctattagtccactagactatgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggccttagacaggcagtcacacaagggctccctaccgaattaaaacctggcacaaatcaatttttaaccaccgatgatggcgtctcagcacccatcctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagctatgccaggtggaaactatcctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtatttagagccgaccctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggtcctctgcctaaggatcgggcaaccgccatgttgggcacgcatgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagggcacatgcccgagatggagtgtttgactactacactacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgtaaggatgctagtgatattctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatcg---aaagttccat--------------------------aggggatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcgctccaagctgctgaaatcggggcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaattcgcacagtacagctgagactactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggctatgccaactgggacatagatataacaggttacgcgcaaatgcgcagaaaggtagagctatttacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccactgggcaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagactctagggaatctcttgcatggcaaaccgccactaacccctcggtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaagagaaagatcttgaatacggagcatgtcctaataacatgatgggcacgttctctgtgcggactgtggggacctccaagtccaagtaccctttagtagttaggatttacatgagaatgaagcacgtcagggcatggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---aaccac---------------------------------------tcttggg------------------------------------------aagtttgggcaacagtctggggccatttatgtgggcaactttagaatggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgatcgcccgttgtgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgtggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggcctcggagatgcttttggaacaggtttcactgacgcagtctcaagggaggttgaagctcttaagaactacctcatagggtctgaaggagcagttgagaaaattctgaaaaacctcattaaactaatttctgcactggtaattgtgatcaggagtgattacgacatggttaccctcactgcaaccttagcgttgataggttgtcacggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaaaaagttcaatgacatggccaacgccgctaaggggttggagtgggtctccaacaagatcagcaaatttattgattggcttaaggagaaaatagtgccagcagctagggagaaggttgaattcttgaataacttgaaacagctgcca-ctgctagagaaccagatctcaaacttggaacaatctgctgcttcacaagaggaccttgaagtcatgtttgggaacgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgacaagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggctacaagcaacaggtggttacagtgatggatgatctatgtcaaaaccccgatgggaaggatatgtctttattttgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtctccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccgacagtgtccgattctgacgctattcgccgcaggttctatatggactgtgatattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccgttagtgtgtgggaaagctatccaactcagagacaggaagtctaaagtcagatacagtgtggacacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgccattagtgacctccttgccagtgtagatagtgaagaagtgcgccagtattgc-agggatcaaggctggatcattcctgaagctcccaccaatgtggagcggcacctaaacagagcggtacttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccagggccatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaaccatatgggttgagcacaaactcgtgaatgtccttgatgcagttgagctggtggatgagcaaggagttaacctggaattaaccctcattactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcccacccatcgcaccatgatgtacaactttcccactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtatccatattggtggcaatggcagacaaggtttttgcgcaggcctcaaaagaagttattttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaggaggcagcccttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctatcgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggatgtgagcaaaatgaagttctacatggacaaatatggccttgatcttccttactccacttatgtcaaggacgagttgcgctcgattgacaaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacacttgtacgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagggcattagaattggttctcagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaatcacacacatcatgtgtatcgtgataagacctattgtgtgcttggtgggatgccctcaggctgctcgggaacgtccattttcaattcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggacgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtcttaccatgactcctgctgataaatctccatgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagttcccatttttaattcaccctactatgtcaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgccttctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctgtat-------------------------accc---------------ctcaaccc-ccccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcc-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289417.1_Enterovirus_A71_isolate_EV71/P1027/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttatacccc--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtagcactatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atc--tttattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-accctcaattatatcttgacccttaacacagccaaa-----catgggttcgcaagtgtccacacagcgctccggttctcacgagaattcaaactcagccactg-agggttctactataaattacaccaccatcaattactataaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacattatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgtccggatgtttcagtgaataggttttacacattagatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagatgtgttaaccgaaactggggtttttgggcaaaatgcacagttccattacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaagtttcaccaaggagcgctcctagtcgctgtcctaccagagtttgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacctggcgccgatggcttcgagttgctacacccgtacgtgcttgatgctggcattccaatatcacagttaacggtgtgcccacaccagtggagtaatttgaggaccaacaattgtgctacaaaaaaagtaccatacattaaggcaatgccttttgattctgccgtgaaccattgcaagttgggcctgttagttgtgcctattagtccaatagactatgaccaaggagcgacgccagtaatccctataaccatcacattggccccaatgtgttccgaattggcaggccttagacaggcagtcacacaagggctccccaccgagttaaaacctggcacaaatcaatttttaaccaccgatgatggcgtctcagcacctatcctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggaaactatcctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtatttagagccgaccctgggcgatacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggtcctctgcctaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagggcacatgcccgagatggagtgtttgactactacactacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgtaaggatgctagtgatattctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatcg---aaagttccat--------------------------aggggatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcgctccaagctgctgaaatcggggcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaattcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggctatgccaactgggacatagatataacaggttacgcgcaaatgcgcagaaaggtagagttatttacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccactggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatctcttgcatggcaaaccgacactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgcccttcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctctgtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---aaccac---------------------------------------ttttggg------------------------------------------aaatttgggcaacagtttggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgactgggcaaattttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgatcgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacacctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacacggggtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagggatctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggcctcggagatgcttttggaacaggtttcactgacgcagtctcaagggaggttgaagctcttaagaactatctcatagggtctgaaggagcagttgagaaaattctgaaaaacctcatcaaactaatctctgcactggtgattgtgatcaggagtgattacgatatggttaccctcactgcgaccttagcgttgataggttgtcacggcagtccatgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaaaaagttcaatgacatggccaacgccgctaaggggttggagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtgccagcagctagggagaaggttgaattcttaaataacttgaaacagctgcca-ctgctagagaaccagatctcaaacttggaacaatctgctgcttcacaagaggaccttgaagtcatgtttgggaacgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaagagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggcattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggctataagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatgggaaggatatgtctttattttgtcaaatggtatctaccgtagacttcattccaccaatggcttccctcgaggagaagggagtctccttcacctccaagtttgtcatcgcatctactaatgccagtaatatcatagtaccgacagtgtctgattctgacgctattcgccgcaggttctatatggactgtgatattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaagcgttgcagcccgttagtgtgtgggaaagctatccaacttagagacaggaagtctaaagtcagatacagtgtggacacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagtgacctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccatcaatgtggagcggcacctaaacagagcggtacttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccagggccatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaaccatatgggttgagcacaaactcgtgaatgtccttgatgcagttgagctggtggacgagcaaggagttaacctggaattaaccctcattactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccttagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcccacccatcgcaccatgatgtacaactttcccactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggaggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttattttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaggaggcagcccttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcttgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggatgtgagcaaaatgaagttctacatggacaagtatggccttgatcttccttactccacttatgtcaaggacgagttgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgactcagtgtacctcagaatggctttcggacacttgtacgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgatacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgctcgggaacgtccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccatgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagttcccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgctggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctgtac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-a-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaatcg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT345959.1_Enterovirus_A71_strain_120/EV71/Wenzhou/CHN/2014_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcgggaaacc-tagtaacgccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gagtactgtgacc-actctcaattatattttgacccttaacgcagccaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgagaattcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaggactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccattgaagtccccatctgctgaggcatgcggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacattatagtcggctatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagacgtgttaactgaaactggggtttttgggcaaaatgcacagttccattacctctaccgttcagggttctgcatccacgtgcagtgtaatgccagcaagttccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagactcaacccggtgccgatggcttcgagttgcaacacccgtatgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgtaactttggcctattagttgtgcctattagtccactagactacgaccaaggagcgacaccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggccttagacaggcagtcacacaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggaaactattctggaggtcaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttactttcatgtttactggatccttcatggccaccggtaagatgctcatagcctatacaccaccgggaggtcctctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggattttggactgcaatcgtctgttacccttgtaataccatggattagtaacactcattatagagcacatgctcgagatggagtgtttgattactataccacagggttagtcagtatatggtatcagacaaattacgtggttccgatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcactattcagggagatagg--------gtggcggatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggacacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgtccttaactcgcacagcacagctgaaaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttaagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcagatgcgtagaaaggtagagctgttcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattactccaatatatgtttgtaccacctggagcccctaagccagattctagggaatctcttgcatggcaaaccgccactaatccctcagtttttgtcaagctgtcagaccctcctgcgcaagtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacatttggagaacacaaacaggagaaggatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtgggaacctccaagtctaagtaccccttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacttattcaaagccaacccaaattatgctggtaa----ctccattaagccaaccggtgccagtcgcacagcgat---aaccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgatttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgactgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagcttttcaaaacccagcctgatctatgtagaggctagcgagtattacccggccaggtaccaatcacatctcatgctcgcgcagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaaa-ggcctcggggatgcttttggaacaggtttcactgacgcagtctcaagggaggttgaagctcttaagaactatctcatagggtctgaaggagcagttgagaaaattctgaaaaacctcattaaactaatctctgcactggtgattgtaatcagaagtgattacgatatggttaccctcactgcgaccttagcgttgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcttaaataacttgaaacagctacca-ctgctagagaaccagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatttagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcacctggcactgggaagtctctagccactggtattattgctcgagcaatcgccgataagtaccactccagcgtgtactcgcttccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggacgatttgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccactgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccgacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccgttagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagtgacctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtggagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagagacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccagggccatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgagcacaaactcgtgaatgtccttgatgcagttgagctggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttattttgctagtgaacaaggagagatccagtgggttaaacccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagttgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgattattttgctccctggttcactctttgcctttgactactcaggttatgatgccagtcttagccctgtctggttcagagcattagaattggttctcagggagatagggtatggtgaagaggcagtctcactcattgagggaattaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacgtccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggacgaactcaacatggtcgcttatggagatgatgtgctcgctagctatcccttcccaattgattgtttggaattagcaaagactggtaaggagtatggtctaaccatgactcctgctgataaatccccttgctttaatgaggtcaattggggcaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagattcatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgataagtttgtgagcacaattaggtctgtcccagtaggaagagcattggctattccaaactatgaaaatcttagacgcaattggctcgagttatttt-----agaggttgtac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT008672.1_Enterovirus_A71_strain_116/EV71/Wenzhou/CHN/2014_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcgggaaacc-tagtaacgccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gagtactgtgacc-actctcaattatattttgacccttaacgcagccaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgagaattcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaggactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccattgaagtccccatctgctgaggcatgcggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacattatagtcggctatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagacgtgttaactgaaactggggtttttgggcaaaatgcacagttccattacctctaccgttcagggttctgcatccacgtgcagtgtaatgccagcaagttccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagactcaacccggtgccgatggcttcgagttgcaacacccgtatgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgtaactttggcctattagttgtgcctattagtccactagactacgaccaaggagcgacaccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggccttagacaggcagtcacacaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtctcagcacctattctaccaaacttctaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggaaactattctggaggtcaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcgcaagcag------ggaaaggtgagctgtgtgcggtatttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgtgggtactacacccaatggtcaggatcgctggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagggcacatgcccgagatggagtgttcgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtagcagatgtaatcg---aaagttccat--------------------------aggagatagcgtgagcagagcctttattcacgctctaccagca--------cccacagaccagaatacccaggtgagcagtcatcgactggatacaggcaaggttccagcactgcaagctgctgaaatcggagcatcatcaaatgctagtgacgagagcatgatcgagacgcgctgtgttctcaattcgcacagtacagctgagaccactcttgatagtttctttagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggctacgccaactgggatatagatataacaggttacgcacaaatgcgcagaaaggtagagctattcacctatatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggggagttgtcccacaattgctccaatatatgtttgtgccacctggggcccctaagccggactctagggaatcccttgcatggcaaaccgccactaatccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggggaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacttattcaaagccaacccaaattatgctggtaa----ctccattaagccaaccggtgccagtcgcacagcgat---aaccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgatttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgactgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagcttttcaaaacccagcctgatctatgtagaggctagcgagtattacccggccaggtaccaatcacatctcatgctcgcgcagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggcttgttggctttacagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaaa-ggcctcggggatgcttttggaacaggtttcactgacgcagtctcaagggaggttgaagctcttaagaactatcttatagggtctgaaggagcagttgagaaaattctgaaaaacctcattaaactaatctctgcactggtgattgtaatcagaagtgattacgatatggttaccctcactgcgaccttagcgttgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcggctagggagaaggttgaattcttaaataacttgaaacagctacca-ctgctagagaaccagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatttagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcacctggcactgggaagtctctagccactggtattattgctcgagcaatcgccgataagtaccactccagcgtgtactcgcttccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggacgatttgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccactgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatctactaatgccagtaatatcatagtaccgacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgccaagctgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccgttagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtagatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaagccagccccagacgctattagtgaccttcttgccagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtggagcggcatcttaacagggcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctgctgagaaggaacatcaggcaagtccaaacagaccagggccatttcaccatgttgggtgttagagatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttggattgagcataaactcgtgaatgtccttgatgcagttgagctggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgaaaagtttagggatatcactaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcgatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttatcggaattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttattttgctagtgaacaaggagagatccagtgggttaaacccaataaagaaactggaagactcaacatcaatggaccaactcgcaccaaattagaacctagcgtgttccatgacattttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggcactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctgccaccagggacgtgagcaaaatgaagtactacatagacaagtatggtcttgatcttccttactccacttatgtcaaggacgagttgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccccgacacattctggagcaagctgccaattttgctccctggttcactttttgcctttgattactcaggttatgatgccagtcttagccctgtctggttcagagcattagaattggttctcagggagatagggtatggtgaagaggcagtctcactcattgagggaattaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacgtccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggacgaactcaacatggtcgcttatggagatgatgtgctcgctagctatcccttcccaattgattgtttggaattagcaaagactggtaaggagtatggtctaaccatgactcctgctgataaatccccttgctttaatgaggtcaattggggcaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagattcatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgataagtttgtgagcacaattaggtctgtcccagtaggaagagcattggctattccaaactatgaaaatcttagacgcaattggctcgagttatttt-----agaggttgtac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289427.1_Enterovirus_A71_isolate_EV71/P454/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttatacccc--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccgactaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttttattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gagttctgtgacc-actctcaattatatcttgacccttaacgcagccaaa-----catgggttcgcaagtgtctacacagcgctccggctctcacgagaattcgaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaggactcttatgccgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccactgaagtccccatctgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccattaccacgcaagaagcggctaacattatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagatgtgttaactgaaactggggtttttgggcaaaacgcgcagttccattacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaagttccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacaatagcaggcggcacagggacgg------aagatacccaccccccttataagcagactcaacccggcgccgatggcttcgagttgctacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacatcaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagtccactagactacgaccaaggagcgacaccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggccttagacaggcagtcacacaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgcattcacatacctggtgaagttaggaacttgctagagttatgccaggtggaaactatcctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgtttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtatttagagccgatcctgggcgcaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggtggtcctctgcccaaagaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcagtcgtctgttacccttgtaataccatggatcagcaacactcattatagggcacatgcccgagatggagtgttcgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcgctagcggcagctcaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatcg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaatcggggcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctcaattcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttacgccaactgggatatagatatcacaggttacgcgcaaatgcgcagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagactctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagatcctccagcgcaggtttcagtgccattcatgtctcctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---aaccac---------------------------------------ttttggg------------------------------------------aaatttggacaacaatttggggctatttatgtgggcaactttagagtggtcaaccgacattttgccactcacaatgattgggcaaattttgtttgggaagacagctttcgcgatttacttgtatcatccaccaccgctcaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatttatgtagaggctagcgagtattacccagccaggtaccaatcacatcttatgctcgcgcagggccactcagaacctggtgattgcggtggtatccttagatgccaacacggcgtcgtcggcatagtgtctactggtggcaatgggcttgttggcttcgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggtttcactgacgcagtctcaagggaggttgaagctcttaagcactatcttatagggtctgaaggagcagttgagaaaattctgaaaaacctcattaaactaatctctgcactggtgattgtgatcagaagtgaatacgatatggttaccctcactgcgaccttagcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcagaagcagagcgcttcctggctcaaaaagttcaatgacatggccaacgccgccaaggggttagagtggatttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctaaggagaaggttgaattcttgaataacttgaaacagctacca-ctgctagagaaccagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggttcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccactgtagacttcattccaccaatggcttccctcgaggagaagggagtatccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccgacagtgtctgattctgacgctattcgccgcaggttctatatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactagatgcagggcgagccgctagactgtgctctgaaaacaacactgcaaatttcaaacgttgcagtccgttagtgtgtgggaaagccatccaactcagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagtgacctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtggagcggcaccttaatagagcggtgcttgtcatgcaatccatcgctacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaggcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgaaccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccagggtcacttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgagcacaaactcgtgaatgtccttgatgcagttgagctggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgaaaagtttagagatatcactaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggaacacatgccatcaatgtttgtcccggtgggtgacgttgtgcaatatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttattttgctagtgaacaaggagagatccagtgggttaaacccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaaattagagcctagtgtattccatgacatcttcgagggaagtaaagagccagctgtcttgcacagtaaagaccctcgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaaccaattgaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggctacccttatagtgccttggggataaagaaaagagatatcttagaccctatcaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagttgcgctcgattgacaaaattaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtatacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaatcttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagggcattagaattggttctcagggagatagggtatagtgaagaggcagtctcactcattgagggaattaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacgtccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggacgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgtttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatccccctgctttaatgaggtcaattggggcaatgcaaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagagagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttgtat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaatcg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP198623.1_Enterovirus_A71_isolate_Hubei-WH/CHN/2012_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata--cc--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagcg-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgtccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttttattggctgcttatggtaacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gagttctgtgacc-actctcaattatatcttgacccttaacgcagccaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgagaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgcggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacattatagtcggttatggtgagtggccttcttactgttcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagatgtgttaactgaaactggggtgtttgggcaaaatgcacagttccattacctctaccgatcagggttttgcatccacgtgcagtgtaatgccagtaagttccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagactcaacccggcgccgatggcttcgagttgctacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggccttagacaggcagtcacacaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggaaactattctggaggtcaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtattcagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagggcacatgcccgagatggagtgttcgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatcg---aaagttccat--------------------------aggagatagcgtgagcagagcccttactcacgctctaccagca--------ctcacaggccagaatacacaggtgagcagtcatcgactggatacaggcaaggtcccagcactccaagctgctgaaatcggggcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctcaattcgcacagtacagctgagaccactcttgatagtttctttagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccgaatggctacgccaactgggatatagatataacaggttacgcgcaaatgcgcagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagactctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggggaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggtacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctatttaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---aaccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgatttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggcttgttggctttgcagacgtcagagacctcttgtggttggatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggtttcactgacgcagtctcaagggaggttgaagctcttaagaactatcttatagggtctgaaggagcagttgagaaaattctgaaaaacctcattaaactaatctctgcactggtgattgtgatcagaagtgactacgatatggttaccctcactgcgaccttagcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcttaaacaacttgaaacagctacca-ctgctagagaaccagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccgacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccgttagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggtaacacaatcgaggctcttttccagggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagtgacctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtggagcggcaccttaacagagcggtgcttgtcatgcagtccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccagggccatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacagcctggtaaaactatttgggttgagcacaaactcgtgaatgtccttgatgcagttgagctggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcccactcatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggccttaaaaggagttattttgctagtgaacaaggagagatccagtgggttaaacccaataaagaaactggaagactcaacatcaatggaccaactcgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttacagtgccttggggataaagaaaagagacatcctagaccctgccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagttgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatctgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacgttctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcagtctcactcattgagggaattaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacgtccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggacgaactcaacatggtcgcttatggagatgatgtgctcgctagctatcccttcccaattgattgtttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatccccttgcttcaatgaggtcaattggggcaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccatccgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289428.1_Enterovirus_A71_isolate_EV71/P63/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttatacccc--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttacccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atc--tttattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggctttgtaccat-----taacctt--------------gagttctgtgacc-actctcaattatatcttggcccttaacgcagccaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgagaattcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgctacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccactattactacacaagaagcggctaacattatagtcggttatggtgagtggccttcttactgttcagattctgacgccacagcagtggataaaccaacacgcccggatgtttcagtgaataggttttatacattggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagatgtgttaactgaaactggggtttttggccaaaatgcacagttccattacctctaccgatcagggttctgcattcacgtgcagtgtaatgccagtaagttccaccaaggagcactcctagttgctgtcctaccagagtatgtcattgggacaatagcaggcggtacagggacgg------aagatacccaccccccttataagcagactcaacccggcgccgatggcttcgagttgatacacccgtacgtgcttgatgctggcattccaatatcacagttgacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaatgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcccattagtccactagactacgaccaaggagcgacaccggtaatccctataactatcacattggccccaatgtgttctgaattcgcaggccttagacaggcagtcacacaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccactgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggaaactatcctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtttttagagccgatcctgggcgaaatggaccatggcaatctaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatctttcatggctaccggcaagatgctcatagcttatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagggcacacgcccgagatggaatgttcgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcctaacacagcctatataatagcactagcggcagcccagaagaatttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatcg---aaagttccat--------------------------aggagacagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaatcggggcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctcaattcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccgaatggctatgccaattgggatatagatataacaggttacgcgcaaatgcgcagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagactctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---aaccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaggacagctctcgcgatttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgtgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacacctcatgctcgcacagggtcactcagaacctggtgattgtggtggtatccttagatgccaacatggcgtcgtcggcatagtatctactggtggcaatgggcttgttggctttgcagacgtcagagaccttttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggtttcactgacgcagtctcaagggaggttgaagctcttaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaacctcattaaactaatctctgcactggtgattgtgatcagaagtgattacgatatggttaccctcactgcgaccttagcgctgataggttgtcatggcagtccgtgggcttggatcaaagctaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaaaaaattcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcttaaataacttgaaacagctacca-ctgctagagaaccagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaaatcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacagaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctccccaggcactgggaagtctctagccactggtattattgctcgagcaatcggtgataagtaccactccagcgtgtactcgatccctccatccccggatcattttgacggtaacaagcaacaggtggttacagagatggatgatttgtgtcaaagccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgctagtaatatcatagtgccgacagtgtctgattctgacgccattcgccgcaggttctacatggactgtgatatcgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccgttagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatatagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctctcttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagtgacctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtggagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaggcctgcccttcgtacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccagggccatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgagcacaaactcgtgaatgtccttgatgcagttgagctggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacactaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgatgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaacttccctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttattttgctagtgaacaaggagagatccagtgggttaaacccaataaagaaactggaagactcaacatcaatgggccaacccgcaccaaattagaaccaagtgtgttccatgacatcttcaagggaaacaaggagccagctgtcttgcacagtaaggacccccgacttgaggtagattttgaacaggccctattctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaaccaattaaagcaattagaaattaatacctctcaaatgagtatggaggaggcctgctacggcactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgaccttccttactccacttatgtcaaggatgagttgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaaccctgggacgataactggatcagccgtggggtgtaatcctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcaatctcactcattgagggaattaatcacacacatcatgtgtatcgcaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacgtccattttcaactcaatgatcaacaacatcattatcagagcactgctcataaaaacatttaagggcattgatttggacgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgtttggaactagcaaagactggtaaggagtatggtctaaccatgactcctgctgataaatccccttgctttaatgaggtcaattggggcaatgcgaccttcctaaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagttcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttgtac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaatcg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289432.1_Enterovirus_A71_isolate_EV71/P990/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttatacccc--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccgactaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgtccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttttattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gagttctgtgacc-actctcaattatatcttgacccttaacgcagccaaa-----catgggttcgcaagtgtctacacagcgctccggctctcacgacaattcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaggactcttatgccgccacagcaggcaaacacagtctcaagcacgatccagacaagtttgcaaatcctgtcaaagacatctttactgaaatggcatggccactgaagtccccatctgctgaagcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccattaccacgcaagaagcggctaacattatagtcggttatggagagtggccttcttactgctcatattcagacgctagatcagtggataaaccaacgcgcccagatgtttcactgaatatgttttacacattggatactaaattgtgggagaaat------------------cgtccaagagatggtactggaagttcccatatgtgttaactgaaactggtgtttgtgcgcaaaacgcacagttccattacctctaccgatcaaggttctgcatccacgtgcagtgtaatgtcagtaatttccaccaactgccactcctagtcgctgtcctaccagactatgacgttgagacactaacaggccgcacaaggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcttgctagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaagcctggcacaaatcaatttctaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagtcaggaacttgctagagttatgtcaggtggagaccattctggaggttaacaa----------tgtacccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggcgaactgtgtgcggtgtttagagcagaccccgggcgaaatggaccatggcaatccaccttactgggccagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggtggtcctctgcccaaagaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagggcacatgcccgagatggagtgttcgactactacaccacagggttagtcagtatatggtatcagacaaattatgtggttccaatcggagcgcccaacacagcctatataatagcgctagcggcagctcaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatcg---aaagttccat--------------------------aggagatagcgtgagcagagctctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaatcggggcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctcaattcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggctacgccaactgggatatagatattacaggttacgcgcaaatgcgcagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagactctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagatcctccagcgcaggtttcagtgccattcatgtctcctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcatggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---aaccac---------------------------------------ttttggg------------------------------------------aaatttggacaacaatccggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaattttgtttgggaagacagctctcgcgatttacttgtatcatccaccaccgctcaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatcttatgctcgcgcagggccactcagaacctggtgattgcggtggtatccttagatgccaacacggcgtcgtcggcatagtgtctactggtggcaatgggcttgttggcttcgcagatgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggtttcactgacgcagtctcaagggaggttgaagctcttaagaactatcttatagggtctgaaggagcagttgagaaaattctgaaaaacctcattaaactaatctctgcactggtgattgtgatcagaagtgaatacgatatggttaccctcactgcgaccttagcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcagaagcagagcgcttcctggctcaaaaagttcaatgacatggccaacgccgccaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctaaggagaaggttgaattcttgaataacttgaaacagctacca-ctgctagagaaccagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggttcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtatccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccgacagtgtctgattctgacgctattcgccgcaggttctatatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactagatgcagggcgagccgctagactgtgctctgaaaacaacactgcaaatttcaaacgttgcagtccgttagtgtgtgggaaagccatccaactcagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagtgacctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtggagcggcaccttaatagagcggtgcttgtcatgcaatccatcgctacagtggtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaggcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgaaccttgactttgctctctccctactgagaaggaatatcaggcaagtccaaacagaccagggtcactttaccatgttgggtgttagggatcgtttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgagcacaaactcgtgaatgtccttgatgcagttgagctggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgaaaagtttagagatatcactaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcaatatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggtctcaaaaggagttattttgctagtgaacaaggagagatccagtgggttaaacccaataaagaaactggaagattcaacatcaatgggccaacccgcaccaaattagagcctagtgtattccatgacatcttcgagggaagtaaagagccagctgtcttgcacagtaaagaccctcgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagcccttcattacgcaaaccaattgaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggctacccttatagtgccttggggataaagaaaagagatatcttagatcctatcaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagttgcgctcgattgacaaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaaccctgacacattctggagcaagctgccaatcttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagggcattagaattggttctcagggagatagggtatagtgaagaggcagtctcactcattgagggaattaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacgtccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggacgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgtttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatccccttgctttaatgaggtcaattggggcaatgcaaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagagagatctatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttgtat-------------------------acac---------------ctcaaccc-caccagaa----gtctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaatcg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289431.1_Enterovirus_A71_isolate_EV71/P977/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttatacccc--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ctccccacgggcgaccgtggcggtggctgcgctggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-cagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atc--tttattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctctgacc-actctcaattatatcttgacccttaacgcagccaaa-----catgggttcgcaagtgtctacacagcgctcaggttctcacgagaattcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagcctcaagcaggacccagataagtttacaaatcctgtcaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacattatagtcggctatggtgagtggccttcttactgttcagattccgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagatgtgttaactgaaactggggtttttgggcaaaatgcacagttccattacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaagttccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagactcaacccggcgccgatggcttcgagttgctacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggctccaatgtgttctgaattcgcaggtcttaggcaggcagtcacacaagggttccccaccgagctgaaacctggcacgaatcaatttttaaccaccgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttagaaacttgctagagttatgccaggtggagactatcctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcgg------ggaaaggtgagctgtgtgccgtatttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggccagctgtgcgggtactacacccaatggtcaggatcattggaagtcacctttatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggactttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagggcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcagcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagataga--------gtggcagatgtaatcg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cctacaggccaggatacacaggtgagcagccaccgactggatacaggcaaggttccagcactccaagctgctgaaatcggggcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctcaattcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggctatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgcttcaatatatgtttgtgccacctggagcccctaagccagactctagggaattccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccccccagcgcaggtttcagtgccattcatgtcccctgcgagtgcttatcaatggttctatgatggatatcccacgttcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaaataccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccatcaagccaactggtgccagtcgcacagcgat---aaccac---------------------------------------ttttggg------------------------------------------aaatttgggcaacagtttggggctatttatgtgggcaattttagagtggtcaaccgacatctcgccactcacaatgattgggcaaattttgtttgggaagatagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgctgcgattgccaaacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccagataccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagacgcttttggaacaggtttcactgacgcagtttcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattctgaaaaaccttattaaactaatctctgcactggtgattgtgatcagaagtgactacgatatggttaccctcactgcgaccttagcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcctcctggctcaaaaagtttaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcttaaataacttgaaacagctgcca-ctgctagagaaccagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagggtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattatcgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtaatggatgacttgtgtcaaaaccccgatggaaaggatatgtccttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctctaaatttgtcatcgcatccactaatgccagtaatatcatagtaccgacagtgtctgactctgatgctattcgccgcaggttctatatggactgtgacattgaagtgacagactcgtacaagacagatctaggtaggctggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccgttagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtcgatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagatgctattagtgatctccttgccagcgtagatagtgaagaagtgcgccagtactgt-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcactacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccagggtcattttaccatgttgggtgttagagatcgcttagcagttctcccacgccactcacaacctggtaaaactatttgggttgagcacaaactcgtgaatgtccttgatgcagttgagctggtggatgagcaaggagtcaacctggaattaaccctcattacgcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccagtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcgggcctcaaaaggagttattttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtacgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgttatggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagggacattttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtacggtcttgatcttccttactccacttatgtcaaggacgagttgcgctcgattgataaaatcaagaaagggaagtcccgtctgattgaggccagtagtctaaatgattcagtgtaccttagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattctgctccctggctcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattagttctcagggagatagggtacagtgaagaggcagtctcactcattgagggaattaatcacacccatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacgtccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggtattgatttggacgaactcaacatggtcgcttatggagacgatgtgctcgctagttatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgagcagtttccatttctgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagctatttt-----agaggttgtac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaatcg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX197455.1_Enterovirus_A71_isolate_HFM005_polyprotein_gene_complete_cds
-------------------------------------------------------------------------------------------------------------------------------c---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaattcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagataagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacggcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcaatgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaattttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctactgagctaaaacgtggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggggcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggagcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatctcgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacaattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttaaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagtaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataatttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattatagctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggtaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaacagagcggtgctcgtcatgcaatccatcgccacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaagcctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgatgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccctactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctgaatgattcagtgtacctcagaatggctttcggacatttgtatgaggttttccacgcaaaccctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtctttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaa----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX197457.1_Enterovirus_A71_isolate_HFM040_polyprotein_gene_complete_cds
-------------------taaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttat----a--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaataaactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtccacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaagtggcagcgccattaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacggcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------catccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcaatgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactgtcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgacgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcatgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggggcccctaagccagattctagggaatcccttgcatggcaaaccgctactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctatttaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttacgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgattacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataatttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattatagctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactatgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccggacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgctcgtcatgcaatccatcgccacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggtaatggcagacagggtttttgcgcaggcctcaaaaggagttacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggttttccacgcaaatcctggaacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaatactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagtacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagtcatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308456.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/308/2012_partial_genome
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccgttaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacggcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactatctctaccgatcagggttctgcatccacgtgcaatgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgattactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgatcgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggggcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggtaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcaaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaataagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataatttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaggtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggtactgggaagtctctagccactggtattatagctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccagatcattttgacggttacaagcagcaggtggttaccgtaatggatgatctgtgccaaaaccctgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaatactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgctcgtcatgcaatccatcgccacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcatattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaatgtccttgatgcagttgagctggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattgatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggttttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgattaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggcaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgtctcctagcatgg----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308417.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/285/2012_partial_genome
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacggcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcaatgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctacacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaatag---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagaaaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggggcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacatcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaagtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataatttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcttgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattatagctcgagcaatcgctgataagtaccactccagtgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgctcgtcatgcaatccatcgccacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatctgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactgcatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatctcccttactccacttatgtcaaggacgagctgcgctcgattgacaaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggttttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaatatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgctcggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaat-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308410.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/342/2012_partial_genome
--------------------------------------------------------------------------------tctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgactcttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacggcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccggtcagggttctgcatccacgtgcaatgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataannnnnnnnnnnnnnnnnnnnaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggccagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggggcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctgttcaaagctaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacatggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaacgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataatttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggatcttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgccgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattatagctcgggcaatcgctgataagtaccactccagcgtgtactcgctcccgccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctatatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgctcgtcatgcaatccatcgccacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgtacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgacgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgactcgaggtagattttgaacaggccctgttctctaagtatgtaggaaacacactacatgagcctgacgggtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggttttccacgcaaatcctgggacgataactggatcggccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggc---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308418.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/392/2012_complete_genome
---------------------------------------------------------------ac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------ggattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacggcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcaatgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgacgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggccagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggggcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgccagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctgttcaaagctaacccaaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaacgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgaaaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataatttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggatcttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattatagctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccgccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccgccaatggcttccctcgaggagaagggagtctccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagaacggcaccttaatagagcggtgctcgtcatgcaatccatcgccacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgtacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagctacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgactcgaggtagattttgaacaggccctgttctctaagtatgtaggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggcttttggacatttgtatgaggttttccacgcaaatcctgggacgataactggatcagccgtgggttgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atct-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308421.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/299/2012_complete_genome
-------------------------------------------------------------------------------------------------------------------------c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacggcagtggacaaaccaacgcgcccggatgtttcagtgaacaggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcaatgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggtggcacagggacgg------aagacacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctggttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccaccagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggccagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgcttatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtaccagacaaattacgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgccgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagcttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggggcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctgttcaaagctaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaacgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataatttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggatcttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattatagctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccgccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagattcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctgttggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaggaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcagtgctcgtcatgcaatccatcgccacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgtacagcaacagtacagggcccgagccttgactttgctctctccctattgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgactcgaggtagattttgaacaggccctgttctctaagtatgtaggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggatacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggttttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaagcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctccggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgagctcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgagcagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaac------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308452.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/393/2012_complete_genome
---------------------------------------------acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggtttcgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattattacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacattttcactgaaatggcagcgccattaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacggcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcaatgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagacacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacactggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaaatcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaatactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgcctggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgtcctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggggcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgccagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgatggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacatcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaggacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctctatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataatttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgttatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattatagctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccagatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccctgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaactcagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgctcgtcgtgcaatccatcgccacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctgctgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtataactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgattgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaagttttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccattcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggtcatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308404.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/309/2012_partial_genome
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---acctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccag--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgatc-acccttaattatattttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcccgttaaagacatcttcactgaaatggcagcgccattaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattccgacgctacggcagtggataaaccaacacgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcaatgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgctgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcgcagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactatgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcggagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtaccacctggggcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacataagcaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgttgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagagttatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcctggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaagatagtaccagcagctagggagaaggttgaattcctaaataatttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaggtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattatagctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagac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>KX197463.1_Enterovirus_A71_isolate_SEP014_EV-A71_polyprotein_gene_complete_cds
-------------------taaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagccaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagctagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaactctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggctatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacacgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcttagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------cgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaaaatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaatacagcttatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagaaaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaacggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgtcgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacgttcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctatttaaagccaacccaaattatgctggcaa----ctccgtcaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctggtttatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacattaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttaaaaaatctaatcaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcttccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctacca-ctgctagagaatcagatctcaaatttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttggaaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaatcctgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagatttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagtgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatttacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacccgcccttcgcacagcaacagtacagggcccgagcctcgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaagactatttgggttgaacacaaactcgtgagcgtccttgatgcagttgaactggtagatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgagaagtttagagatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgttccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaggcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggtagacagggtttttgcgcaggcctcaaaaggagctactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagagcctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggcactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttaaaccctaccaccagggacgtgagtaaaatgaagttttacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgcacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactttttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacattcaagggcattgacttggatgaactcaacatggtcgcttatggagatgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaagttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt--ag-agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX197465.1_Enterovirus_A71_isolate_SEP042_polyprotein_gene_complete_cds
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaactctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagttggctatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacacgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcttagtcgctgtcctaccggagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggactaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaaaatgctcatagcctatacaccgccaggaggccctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaatacagcttatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagaaaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgtcgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacgttcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctatttaaagccaacccaaattatgctggcaa----ctccgtcaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatttatgtagaggctagcgagtattacccagccagataccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacattaag-ggtctcggagacgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatctaatcaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcactgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcttccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaatttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttggaaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccctgacggaaaggatatgtctttattctgtcaaatggtatctaccgtagatttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctatccgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagctgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacgatcgaggctcttttccaaggaccacccaagttcaggccaattagaatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatttacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacccgcccttcgcacagcaacagtacagggcccgagcctcgactttgctctctccctactgaggaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaagactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgagaagtttagagatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgttccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaggcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggtagacagggtttttgcgcaggcctcaaaaggagctactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagagcctagtgtattccatgacatcttcgagggaagtaaagagccagctgtcttgcacggtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcgaaccaattaaagcaattagaaattaatacctctcaaatgagtatggaggaggcctgctacggcactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttaaaccctaccaccagggacgtgagtaaaatgaagttttacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactttttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagatgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggaaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaagttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatt-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308409.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/353/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-gcgagcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagccaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatgcggacatggtgtg-aagagtctactgagctagctagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaactctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgccgccacagcaggcaaacagagtctcaagcaggacccagacaagtttgcaaaccctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatctgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacacgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaacgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagcaaattccaccaaggagcactcttagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgatcaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcagttcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagtgaggaacttgctagagttatgccaggtggagaccattctagaggttaataa----------tgtgcccacgaatgctactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagaaaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgtcgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctgttcaaagccaacccaaattatgctggcaa----ctccgtcaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatttatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcatcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagacgaagaagctatggaacagggcgtgtccgactacattaaa-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggggcagttgagaaaattttgaaaaatttaatcaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcttccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaatttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttggaaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggcattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccctgacggaaaggatatgtccttattctgtcaaatggtatccaccgtagatttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcgtccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtggagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagcctcgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccgcgccactcacaacccggtaaaactatttgggttgaacacaaactcgtgagcgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgacgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaaacctacccatcgcaccatgatgtacaactttcctactaaggcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagctacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaacggaccaacccgcaccaaattagagcctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtacgtgggaaacacactacgtgagcctgacgagtacatcaaagaggcagctcttcattatgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggatgtgagtaaaatgaagttttacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattttggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagagttggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagatgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttctgcccgatgaacagtttccgttcttaattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcacgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308411.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/351/2012_partial_genome
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagccaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatgcggacatggtgtg-aagagtctactgagctagctagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaactctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgccgccacagcaggcaaacagagtctcaagcaggacccagacaagtttgcaaaccctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatctgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacacgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaacgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagcaaattccaccaaggagcactcttagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgatcaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcagttcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagtgaggaacttgctagagttatgccaggtggagaccattctagaggttaataa----------tgtgcccacgaatgctactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagaaaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgtcgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctgttcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatttatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcatcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagacgaagaagctatggaacagggcgtgtccgactacattaaa-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggggcagttgagaaaattttgaaaaatttaatcaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcttccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaatttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttggaaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggcattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccctgacggaaaggatatgtccttattctgtcaaatggtatccaccgtagatttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcgtccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtggagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagcctcgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccgcgccactcacaacccggtaaaactatttgggttgaacacaaactcgtgagcgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgacgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaaacctacccatcgcaccatgatgtacaactttcctactaaggcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagctacttcgctagtgagcaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaacggaccaacccgcaccaaattagagcctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtacgtgggaaacacactacgtgagcctgacgagtacatcaaagaggcagctcttcattatgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggatgtgagtaaaatgaagttttacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattttggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagagttggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagatgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttctgcccgatgaacagtttccgttcttaattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcacgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaat---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308416.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/354/2012_partial_genome
----------------------------------------------------------------------------------------------------------------------------------------ccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-gcgagcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagccaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatgcggacatggtgtg-aagagtctactgagctagctagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaactctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgccgccacagcaggcaaacagagtctcaagcaggacccagacaagtttgcaaaccctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatctgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacacgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaacgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagcaaattccaccaaggagcactcttagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgatcaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcagttcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagtgaggaacttgctagagttatgccaggtggagaccattctagaggttaataa----------tgtgcccacgaatgctactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagaaaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgtcgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagccgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcatcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagacgaagaagctatggaacagggcgtgtccgactacattaaa-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggggcagttgagaaaattttgaaaaatttaatcaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcttccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaatttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttggaaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggcattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccctgacggaaaggatatgtccttattctgtcaaatggtatccaccgtagatttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcgtccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgctcgtcatgcaatccatcgccacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaggtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgacgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtacgtgggaaacacactacgtgagcctgacgagtacatcaaagaggcagctcttcattatgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggatgtgagtaaaatgaagttttacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattttggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagagttggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagatgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttctgcccgatgaacagtttccgttcttaattcaccctactatgccaat-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686253.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/159/2012_complete_genome
-----------------------------------------------------------------------------cactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagccaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagctagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--cttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaactctgcgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcacaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttccaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactctaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacacgcccggatgtttcagtgaataggttttacacgttggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcttagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggtttcgagctgcaacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgctttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcttgcagacgggcaccattcagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagaaaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgtcgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaggatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggataccccgcccgatgcgcaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgtcaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatctcgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatttatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatcctcaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacattaaa-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcttccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgccg-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttggaaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccgggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcagcaggtggttaccgtgatggatgatttgtgccaaaaccctgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagatttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaattgtgctccgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagtatagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacattaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaggcagggcagtgtggaggagtggtgacatctgttggaaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagctactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagagcctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcgaaccaattaaagcaattagaaattaacacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttttacatggataagtatggtcttgatcttccctactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagtcctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacaccatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagatgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggctatac-------------------------ac-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686160.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/46/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------at-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagctagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--cttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggctcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactataaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggggcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccaatggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcagttcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaagttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacgaattacgtggttccaattggtgcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagccgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttacgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggtacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaatcagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatttatgtaggggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaaa-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagccctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcttccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccctgacggaaaggatatgtctttattctgccaaatggtatccaccgtagatttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaactcattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaagccagccccggacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggttggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattccggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaggttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggtaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaaattagagcctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaagaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggccttccacgcaaatcctgggacgataactggatcagccgtggggtgtaatcctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgtaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308446.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/360/2012_partial_genome
---------------------------------------------------------------------------------ctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaactctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgccgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacacgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaacgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagcaaattccaccaaggagcactcttagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgatcaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcagttcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcctg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagaaaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgtcgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttggatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggggcagttgagaaaattttgaaaaatttaatcaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcttccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataatttgaaacaactgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattatagctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccctgacggaaaggatatgtccttattctgtcaaatggtatccaccgtagatttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtggagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagcctcgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttggcagtccttccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgagcgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaaacctacccatcgcaccatgatgtacaactttcctactaaggcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagctacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaacggaccaacccgcaccaaattagagcctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagtacaattaggtctgttccagt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430819.1_Enterovirus_A71_strain_EVA71/Homosapiens/VNM/13.1/2012_polyprotein_gene_partial_cds
------------------------------------------------------------------------------gctctg-----cagatatc---------------------------cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagta-aaccac-gatcaa-tagtaggcataacgctccagttgtgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccactatcaattactataaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaaatccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccattaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggactaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaggggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctagaggttaataa----------tgtgcctacgaatgccactagcttg------atggagagactgcgtttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctactggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcagtcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagnngggcaccatccagggagatagg--------gtggcagatgtgattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagwatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctacctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctatatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgcttcaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaactgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcannnnnnagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcatggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggtaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcgcatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatcctcaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggggatgcttttggaacaggctttactgacgcagtcccaagggaggttgaggctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttaaaaaatctaattaaactaatctcagcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaagggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaagagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagac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>KX430820.1_Enterovirus_A71_strain_EVA71/Homosapiens/VNM/13.2/2012_polyprotein_gene_partial_cds
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aggcataacgctccagttgtgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccactatcaattactataaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaaatccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccattaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggactaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaggggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctagaggttaataa----------tgtgcctacgaatgccactagcttg------atggagagactgcgtttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctactggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcagtcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtgattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctacctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctatatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgcttcaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaactgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcatggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggtaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcgcatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatcctcaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggggatgcttttggaacaggctttactgacgcagtctcaagggaggttgaggctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttaaaaaatctaattaaactaatctcagcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaagggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaagagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttcccttgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaattttaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcggaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccagggacatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcatatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaattttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtcgggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggctatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaactggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcccgaaacactcaagatcatgtgcggtccctgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttaga----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686201.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/162/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagta-aaccac-gatcaa-tagtaggcataacgctccagttgtgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccactatcaattactataaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaaatccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccattaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggactaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaggggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctagaggttaataa----------tgtgcctacgaatgccactagcttg------atggagagactgcgtttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctactggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcagtcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtgattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctacctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctatatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgcttcaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaactgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcatggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggtaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcgcatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatcctcaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggggatgcttttggaacaggctttactgacgcagtctcaagggaggttgaggctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttaaaaaatctaattaaactaatctcagcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaagggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaagagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttcccttgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaattttaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcggaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccagggacatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccattcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcatatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaattttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtcgggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggctatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaactggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcccgaaacactcaagatcatgtgcggtccctgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggtcatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308445.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/330/2012_partial_genome
-------------------------------------------c-acccactcgca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcgtgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcggattctgacgctacggcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaattggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcaatgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaactttactatgaaactgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagcttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatacatgtttgtgccacctggggcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtttcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataatttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattatagctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgctcgtcatgcaatccatcgccacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggtagtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttacttcgctagtgaacaaggagaggtccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagtatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggatcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgctggctattccaaattatgaaaaccttagacgcaat----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686219.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/164/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---tccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccgactagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--cttt---atcttcatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggctctaccataaactacaccaccatcaattactacaaagactcttatgctgctacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggctatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggtacagggacgg------aagatacccaccccccttataaacagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacatcaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtacctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcgggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacccattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcagtcgtctgttacccttgtaataccgtggatcagcaacactcattacagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccggcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggggcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtgggtacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgattacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgccatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctactagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgcctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtccgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcatattctggtgctcctaaacaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctattgagaaggaacatcaggcaagttcaaacagaccaggggcacttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacatcaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagaccctcgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaacacctctcaaatgagtatggaggaggcctgctatggtactgagaaccttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaaatcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagttgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtttggttcagagcattggaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtacttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtctttgtgcctcctggcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686150.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/109/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgccccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcaaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccag--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttggccaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgccgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgactctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctatgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactggcggcagcccaaaagaactttactatgaaattgtgcaaggacgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgaaacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacgcctaccggggaagttgtcccgcaattgctccaatatatgtttgtgccacccggagcccctaagccagattctagggaatcccttgcatggcaaactgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgatttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgcttgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcatcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcaccgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccattccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatttgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtgtccaccgtagacttcattccaccaatggcttccctcgaagagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgatattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagctgctaaactgtgttctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgatgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccgatgggttaaacccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctattctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaacacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagttgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggtttagagcattagaattggttctcagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattattagagcattgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttcttcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagtcatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686203.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/67/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaagcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaagttccatcaaggagcacttctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggcgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtatgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattccgccttgaaccattgcaactttggcctactagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgggatggagtgtttgactactacaccacagggttagtcagtatatggtaccagacaaattacgtggttccaattggtgcgcccaacacagcatatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactagatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacttacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagccgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttaaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggtagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagacaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagtgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccgccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtatctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcatttaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggacacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccactcaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agagatcaaggctggattatccctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatctatcgccacagtagtggcagttgtctcgttggtgtacgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggtccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttatcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaggcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaagttaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgtttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcacgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686195.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/103/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacttttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtctcagtgaataggttttacacgttagacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccatgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatactcaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaacttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcccattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaacaa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcggcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagcttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcacaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccatttatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagggtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtatcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtattcttaggtgccaacatggtgtcgttggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggtagcccatgggcttggatcaaagccaaaacagcttccatcttaggtatccctattgctcaaaagcagagcgcctcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttataagcaacaggtggttaccgtgatggatgatctgtgccaaaaccccgacgggaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccgttagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggtaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgtcactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtcctcgatgcagttgaactggtggatgagcaaggagtcaacctggaattgaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggttttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtatacacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacattttcgagggaaataaagagccagctgtcttgcacagtaaggacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaatcaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgaggatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgataaaattaagaaagggaagtctcgtctgatcgaggctagtagtctaaatgattcagtatacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtttggttcagagctttagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcacaatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686226.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/157/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgctgctaaa-----catgggttcgcaagtgtccacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaaccctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcgggtcttaggcaggcagttacgcaagggttccccaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgagaaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagattgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgtgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggtcctctacccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtccgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgattactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcactatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggctatgccaattgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctctgttaagccaactggtgccagtcgcacagcgat---taccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgtgattgtcagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatttatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggccactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtggtcagaagtgattacgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagcccgtgggcttggatcaaagccaaaacagcctccatcttaggtattcctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtctccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaagagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactagtattattgcccgagcaatcgctgacaagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctatgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaacatcatagtaccaacagtgtctgactccgacgctattcgccgcagattctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccgattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctcctcgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaggctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagtcttgacttcgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtagatgagcaaggagttaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggcaagcccacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaaccggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgatgagtacatcaaagaggcagctcttcattacgcgaaccaattgaagcaattaggaattgatacctctcagatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagaaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctaccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctactgtgtgcttggtggaatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattatcatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccgattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccattcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686193.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/184/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttgta-------ccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---acctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgctacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattccgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttgactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctatcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgacggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctggttgtgcctattagtccactagactacgaccaaggagcgacgccagtgatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtacccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaggcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatatgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgacatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatacatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcaccagcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctctagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaattcggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagtctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggccactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgttgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatcttataggatctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatctggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagattagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctactagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgactccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaggtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttagtagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccaagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattgaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaaacctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgtagggaaggttgttggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgaaccaaattggaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacggtaactggatcagccgtggggtgcaatcctgacacattctggagcaagctgccaattttgctccctggttcactctttgccttcgactactcagggtatgatgccagccttagccctgtctggtttagagcattagaattggttcttagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacgtttaagggtattaacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccattcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686133.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/200/2011_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttacattggctgcttatggtgacaattaaa-------gaattgttaccatatagctactggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaatactgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcggtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtattggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtacagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggctccaatgtgttctgaattcgcgggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagctcctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccctactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaagtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcggagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacatttggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtaggaacctccaagtccaagtaccctttagtagttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcagctttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagttctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaagcctagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggtgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgccgcaagttccaaccgctatatgccacggaagctaaaagagtctatgccctggagaagaggatgaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggggtttccttcacctccaagtttgtcatcgcatccactaatgctagcaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgcagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccactaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccagtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaagtagattttgaacaggccctgttctctaagtatgtgggaaacacattacatgagcctgacgagtacatcaaagaggcggctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggtattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggagtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagttcccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686135.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/75/2012_complete_genome
-------------------------------------------c-acccacccaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata-------ccc---c---tccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtagcaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----ttcatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttgattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtccacacagcgctccggttctcacgaaaactcaaattcagccactg-agggttccaccataaactacaccactatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtcaccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacggcagtggataaaccaacgcgcccagatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtattggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttttgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacag------aagatacccaccccccttataagcagacccaacccggtgccgatggctttgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctactagttgtgcctattagtccactagactacaaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgagttcgcaggccttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgacgatggtgtctcagcacctattctgccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggcgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactattacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgatcgaaacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacgggctacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgttttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttacgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagatagctctcgcgacttgctcgtgtcgtccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaagcccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccagcatggtgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggtgtgtccgattacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatctcgtagggtctgaaggagcagttgagaaaattttaaaaaatctaattaaactgatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggctagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttataagcaacaggtggttaccgtgatggatgatctgtgtcaaaatcccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttctttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgactccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgcagcccattagtgtgcgggaaagctatccaacttagagataggaagtctaaagtcagatacagtgtggacacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaactgtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgagcgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacaataaagacccccgacttgaggtggattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggctacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccctactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcggtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcacttattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcaggaacatccatttttaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagctaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccatccggtggaccaaggacgctcgaaacactcaagatcatgtgcgatccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtgggaagagcgttggctattccgaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686186.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/40/2011_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata------cccc---t---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttgattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgctacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtcaccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaaggggtggtactggaagtttccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccggtcagggttctgcatccacgtacagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctactagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaaccaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------cgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggggtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtaagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagaaaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggctacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggagaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatccctcgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcggaccctccagcgcaggtctcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatctcgtagggtctgaaggagcagttgagaaaattttaaaaaatctaattaaactgatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcacagcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacttagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgcagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggacacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattatccctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgatgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgactcgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcaaaccaattaaagcaattagaaattaatacctctcagatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgagactttccacgcaaatcctgggacgataactggatcagccgtggggtgcaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgccttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctaaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtctatccggtggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686213.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/66/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaagcc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggtgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggttctctaatacggacatggtgtg-aagagcctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggtttcgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatattttgacccttaacgcagctaaa-----catgggttcgcaagtatctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattattacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaattccaccatcaccacgcaagaagcggctaatatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggatactaagttgtgggagaaat------------------cgtccaaggggtggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctatcgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagacacccaccccccttataagcagacccaacccggtgccgacggctttgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacgttggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggagtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggcgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcagggtcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctacccaaggaccgggcgactgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccaaaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgagattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtctaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aagtttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccacacacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagatctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgatgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgacatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ttgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgttctgagaacaacactgcaaatttcaaacgttgtagtccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatatagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtattagggatcgcttagcagtccttccacgtcactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgaacaaggagtcaacctggaattaactctcattactcttgacaccaacgagaagtttagggacattaccaaattcatcccggaaaatatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgatgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgttttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattctgtgtatctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaggaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccatcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaatactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggccattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308439.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/311/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccctggtacctttgtgcgcct-g-ttttata---c--cccc---c---tccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaaccctgttaaagacatcttcactgaaatggcagcgccattaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagctgtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcggggttctgcatccacgtgcaatgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtaccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctgttagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacactggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaacaa----------tgtgcccacgaacgccactagcttg------atggaaagactgcgcttcccggtctcagcacaagcgg------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcatgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattatgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccagaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggacacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggctacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttacgacgggtatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcgtgtcctaataacatgatgggcacgttctcagtgcggactgtagggtcctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgttagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacagcagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactactgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggtgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcctttggaacaggctttactgatgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaataaaactaatctctgcattggtgattgtgatcagaagtgattatgatatggtcaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagtgcttcctggctcaagaagtttaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaagttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacatcgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattatagctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagtccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcggaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgctcgtcatgcaatccatcgccacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtactctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagcctcgactttgctctctccctattgagaaggaacatcaggcaagttcaaacagatcaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaactaaccctcattactcttgacaccaacgaaaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaatacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaacttccctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaaccggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctatggtactgagaatcttgaggctatcgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccaaggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcgggcatttgtatgaggttttccacgcaaatcctgggacgataactggatcagctgtggggtgcaaccctgacacattctggagcaagttgccaatcttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataaaacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactctatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagatgatgtgctcgctagttatcccttcccgattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcccgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaggatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308431.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/315/2013_complete_genome
-------------------------------------------------actcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cctc-c------aa-t-gaaacttagaag--------------caaca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtagcaccatgaaagttgcggagagcttcgttcggca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacggcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcaatgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacag------aagacacccaccccccttacaagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtatgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttccgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgattcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcttatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattacagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccagaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcacccacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcgaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctcccccttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagactctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacgggtatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggtcctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccagggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgtcaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcattggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaagacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggtcgaattcctaaataatttgaaacagctacca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcatacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtcttatcattaggggctcaccaggtactgggaagtccctagccactggtattatagctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtggacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagacagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccactaatgtagagcggcaccttaatagagcggtgctcgtcatgcaatccatcgccacagtagtggcagttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaatgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaatcaatacctctcaaatgagcatggaggaggcctgttacggtactgagaatcttgaggctattgatcttcacactagcgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggttttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaatcttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcactagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccattcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-cacca----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308403.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/297/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc--------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-cagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccgtggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcatgcgcccacaagcca-gtggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggctttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggctttgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaatttgcaggccttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattttaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatcctttatggctaccggtaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggcgcgcccaacacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagtagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgagattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagtagggcgggattagttggagaaatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggagaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccccaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacccgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctctaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgtcaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacaccttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgcaactcaatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggtgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcttccatcttaggtatccctatcgctcaaaagcagagcgcttcctggcttaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtctccaacaagatcagcaaatttattgattggcttaaagagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaacttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagtaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agccttgaagaaaagccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctttccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccacgctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgtcgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccggcttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactaagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggcaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaggaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308427.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/312/2012_partial_genome
------------------------------------------------------------------------------------------cggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccat-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtgccat-----taacctt--------------gaattctgtgacc-acccttgattatatcttgacccttaacgcaactaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgagaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtctccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgttattgggacagtagcaggcggcacaggaacgg------aagacacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaaggattccctaccgagctaaaacctggcacaaatcaattcttaaccaccgacgatggtgtctcagcacctattctaccaaacttccaccccaccccatgtatccacatacctggtgaagtgaggaacttgctagagttgtgccaggtggaaaccattctggaggttaataa----------tgtgcccacaaatgccactagcttg------atggagagactgcgcttccctgtctcagcacaagcgg------ggaaaggtgagctgtgtgctgtgtttagagccgatcctgggcgaagcggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatctttggaggtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcatctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacaggtttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgcgttctcaactcgcacagtacagcagagaccactctagatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttacgccaattgggatatagatataacaggttacgcgcaaatgcgtagaaaggtagaactattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggagcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatctacatgaggatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ttccgttaagccaaccggtgccagtcgcacagcgat---taccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgactgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggctgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaggaagctatggaacagggcgtgtccgattacatcaag-ggtctcggagatgcttttggaacaggcttcaccgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcattggtgattgtgatcagaagtgattatgatatggttaccctcactgcaaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccattttaggtatccctattgttcaaaagcagagcgcttcctggctcaagaaattcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttggaaatgtatcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaacaactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccgggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatctgtgtcaaaatcccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgccaaactgtgctctgagaacaacactgcaaatttcaaacgttgcagcccattagtgtgcgggaaagctatccagcttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagagcttattagggaatacagcaataggtccgctattggcaacacaattgaggctcttttccagggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcaccacagtagtggcagttgtctcgttggtgtatgttatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctattgagaaggaacatcaggcaagttcaaacagatcaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgttcttgatgcagttgaactggtggacgagcaaggagtcaacctagagttaaccctcattactcttgacaccaacgagaagtttagggatattactaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgcggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaagaagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaaggctcaacattaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaggagccagctgtcttgcatagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacacgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattgatacctctcaaatgagcatggaggaggcctgctacggcactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaagagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggcctcgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaagccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacaataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcttttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttagaactagcaaagactggtaaggagtatggtctgaccatgactcctgccgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccattcttgat-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686136.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/235/2011_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggcaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttgattatatcttgacccttaacgcaactaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgagaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaaccctgttaaagacatcttcactgaaatggcagcgccactgaagtctccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacattatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacaggaacgg------aagacacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgacgatggtgtctcagcacctatcctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtagaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcgg------ggaaaggtgagctgtgtgctgtgtttagagccgatcctgggcgaagcggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacaggattagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacactctaccagca--------cccacaggccagaatacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgcgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaattgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagaactattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggagcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ttccgttaagccaaccggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgactgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgactgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaggaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcaccgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtatcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatctgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaggtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgcagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcaccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagatcaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgttcttgatgcagttgaactagtggatgagcaaggagtcaacctagaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgcggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaaggctcaacattaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaggagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatatgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattgatacctctcaaatgagcatggaggaggcctgctacggcactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaagagagacattttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggcctcgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaagccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacaataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcttttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtggaatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctaccccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccattcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcttagcatggcataatggtaagcaagaatatgagaagttcgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686265.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/24/2011_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccta---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttgattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgagaactcaaactcagccactg-aaggttctaccataaactacaccaccatcaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattagacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggcgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaatttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctactggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtatttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggctatgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagagaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctgttcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattggacaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtactacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcctttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaattaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctggagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagctactggcattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatctgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatctaccgtagactttattccaccaatggcttccctcgaggagaagggagtctccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgcagcccattagtgtgcgggaaagctatccagcttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaatagatccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccattgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtgcagggcccgagccttgattttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggggtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcgatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaagttagaacctagtgtattccacgacatcttcgaggggaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaacacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctcccaattttgctccctggttcactctttgcttttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccattcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtagggagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686138.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/117/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagaccgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggtaaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgatc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgctacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaaatccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagttaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggtatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgcgctacaataatagtgccatacatcaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagttacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtattcatatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactgggtccttcatggctaccgggaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcatgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttctat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccgaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtggaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagggacctcttgtggttagacgaagaagctatggaacagggcgtgtccgattacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctaataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagtgcttcctggctcaagaagttcaatgacatggccaacgccgcgaaggggttagagtgggtttccaacaaaatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagtttcaaccgctatacgctacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttcccttgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctatatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaattttaaacgttgcagcccattggtgtgcgggaaggctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttgttagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagatgctattagtgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcatcttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgttagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcatagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtacgtgggaaacacactacatgagcctgacgagtacatcagagaggcagctctccattacgcgaaccaattaaagcaattagaaattaatacttctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgctttggggataaagaaaagagacatcttagaccctaccaccagggacgtgggtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagcctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcgctctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcctatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggcaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgaatccattcgatggaccaaggacgctcgaaacactcaagaccatgtgcggtctttgtgcctcctagcatggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatgc-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686139.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/43/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagccaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaacacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgatc-acccttaattacatcttgactcttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagttcgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcagctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggtatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgcgctacaataatagtgccatacattaacgcgctgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagggccgatcctgggcgaaacgggccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagtagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagcttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccgaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgttaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgatggatatcccacatttggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtagggacttccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgtcagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtggaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggttttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaaa-ggtctcggagatgcttttggaacaggcttcactgatgcagtctcaagggaggtcgaagctctcaagagctatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggcatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgccgctaaggggttagagtgggtttccaacaaaatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacttagctca---------cttctgtcgcaagtttcaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaacaactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggtactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgcagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgttgatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaaattcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagtgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctataagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcactaagttagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactgcatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacttctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgctttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggtattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccacgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC296443.1_Enterovirus_A71_strain_HCM82-VNM-2011_complete_genome
--------------------------------------------------------------------------------------------------------gcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgatc-acccttaattatatcttgactcttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggacccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacaggaacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggtatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgcgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgattggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccgaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgatggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtggaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaaa-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggtcgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgccgctaaggggttagagtgggtttccaacaaaatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagtttcaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaacaactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaattttaaacgttgcagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagtgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaatccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacttctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgctttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccctactccacttatgtcaaggatgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgaaaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaacc-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686146.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/132/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cctc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgctcacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgatc-accctcaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaaatccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggtaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctctgattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccacccctcttataagcagacccaacccggtgccgatggctttgagctgcaacacccgtacgtgcttgatgctggtatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgcgctacaataatagtgccatacatcaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggtcccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttctat--------------------------aggagatagcgtgagcagagccctcactcacgctttaccagca--------cccacaggtcagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccgaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgcagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttttcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttatatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaattcgatgagaaaacactacccagtcagtttttcaaaacccagcttgatctatgtggaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagacgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggtcgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaaaatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttggaaatgtgtcgtacctagctca---------cttctgtcgcaagtttcaaccgctatacgctacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaagtggttaccgtgatggatgatctgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttcccttgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgtgatattgaagtgacagactcgtacaaaacagatctaggtagattggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgcagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtatcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagatgctattagtgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctgctgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgttggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcatagtaaggacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcagagaggcagctctccattacgcgaaccaattaaagcaattagaaattaacacttctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgctttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgcaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaagaagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtctttgtgcctcctagcatggcataacggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcattggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatgc-------------------------acac---------------ctcaaccc-caccag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686199.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/160/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgtgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttacccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcggca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccgcaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgatc-acccttaattatatcttgacccttaacgcagttaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaattcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttggccaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgctgatggcttcgagctgcaacacccgtacgtgcttgatgctggtatcccaatatcacagttaacagtgtgcccacaccagtggattaacttgaggaccaacaattgcgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacccattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagttgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcacctttatgtttactgggtccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcattagcggcagcccaaaagaatttcaccatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taaccctaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagccccaaagccagattctagggaatctcttacatggcaaactgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacatttggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgcttgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtggaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaggaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggtcgaagccctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctctatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaaaatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagtttcaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgtcaaaaccccgatggaaaggatatgtccttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatctactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtataaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgcagcccattagtgtgcggtaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagtgatctccttgctagcgtagacagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtggagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggacgaacaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaagttagaacctagtgtattccatgacattttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgaacctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacttctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgctttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtagggtgtaaccctgacacattctggagcaagctgccaattctgctccctggtgcactctttgctttcgactactcaggttatgatgccagccttagtcctgtctggttcagagcattagaattggttctcaaggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtaccgtaacaagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgagctcaacatggtcgcttatggagacgatgtgctcgctagctatcctttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcaaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgccttctagcatggcataatggtaagcaagaatacgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctatcccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacgt-g-actg--------gtg-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691665.1_Enterovirus_A71_isolate_VN152/2011_complete_genome
-------------------ttaaa--sag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc--------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcagagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacgaacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gtggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgagactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaagttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatctttggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggtaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggcatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattctgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcgatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttctttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgcagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcaattagaaattaatacctctcagatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt--aa-cagtacagctt-------------------------amac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacg-g-t-tataacaaattt-----------------------------------------------------------------------------accc-----------------------------------------------------------------------------------------------------------------------------------------
>KP308405.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/376/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggtgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata--cc--cccc---c----ccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttgccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttgtt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaattcagccactg-agggttctaccataaactataccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaagatccagacaagtttgcaaatcctgttaaagatatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcacaattaactattggcaactccaccattaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcgcaatttcactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccatacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctacacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactatagagcacatgcccgagatggagtgtttgactactacaccacagggctagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgaaagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggatatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggggaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aagtttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggtaaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaagggattagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcaccgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtattcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagac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>KP308426.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/319/2013_partial_genome
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------taacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctccaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttgtt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactataccaccatcaattactacaaagactcttatgctgccacagcaggtaaacagagtctcaagcaagatccagacaagtttgcaaatcctgttaaagatatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcgtgtgggtacagtgatcgagtggcacagttaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaactgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcgcaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcgctcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcaaacccaacctggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtaccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcaacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttactagagttatgccaggtggaaaccattctggagattaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactatagagcacatgcccgagatggagtgtttgactactacaccacagggctagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaatacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgaaagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagacctccctcttgagggcacaac-taacccaaatggttatgccaactgggatatagatataacaggttacgcgcaaatgcgtagaaaggtagagttattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattacgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aagtttggacaacagtctggggctatttatgtgggcaactttagagtagtcaaccgacatcttgccactcacaatgattgggcaaaccttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctgatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggtgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgattacatcaag-ggtctcggagatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttaaaaaatctagttaaactaatctctgcactggtgattgtgatcagaagtgattacgatatggtaaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcagtgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcaccgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagtgtgtactcgctcccaccagacccggatcatttcgacggttacaaacaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagatttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgatattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacggcaataggtccgctattggcaacacaatcgaggctcttttccagggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtatatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcccaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagttaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccagtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacattttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgagcaggccctattctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattaaagcgattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcaattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacaataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttactccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtttggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgctcggaactagcaaagactggtaaggagtatggcttgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttcttcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcacaatggtaagcaagaa----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX197462.1_Enterovirus_A71_isolate_SEP006_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gggggttg-c-acccacccaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgtgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttgtt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatattttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttagacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcagcacccgtacgtgcttgacgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgagttcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaatttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgaactgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaggtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttggtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggtcagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgtcctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctcttcacctacatgcgctttgatgcagagttcacttttgttgcgtgtacacctaccggggaagttgttccacaactgctccaatatatgtttgtgccacctggagccccaaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacgttcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggtcctccaagtccaagtaccctctagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaatccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagggtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtccactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagccatggaacagggcgtgtccgactacatcaag-ggtctcggggatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgatatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaagatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaaatcatgtttgggaatgtatcgtacctagctca---------cttctgccgcaagttccaaccgctatacgccacggaagctaggagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccagatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccgttagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcagacaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgtcactcacaacctggcaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattgaccctcattactcttgacaccaacgagaagtttagggatattaccaagttcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcatatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtagtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaacaaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaagtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcggctcttcattacgcgaaccaattgaagcaattagaaattaatacctctcaaatgagcatggaagaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggatacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctacgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacaataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattagttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaaccacacacaccatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattatcatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtttgaccatgactcctgctgataaatctccttgcttcaatgaggttaattggggtaatgcgaccttccttaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccccactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcccgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaaacaagaatatgagaagtttgtgagcacaattaggtctgttccagtgggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308433.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/271/2012_complete_genome
-------------------------------------------c-acccacccaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgtgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatattttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgcggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccggtcagggttctgcatccacgtgcagtgtaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgacggcttcgagctgcaacacccgtacgtgcttgacgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgagttcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggtacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaatttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttggtcagtatatggtatcagacaaactacgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagtcctcactcacgctctaccagca--------cccacgggtcagaacacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgtcctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctcttcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaactgctccaatatatgtttgtgccacctggagccccaaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacgttcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggaccgtagggtcctccaagtccaagtaccctctagtgattaggatttacatgagaatgaagcatgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagggtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggctagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggcctcggggatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttaaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgatatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaagatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaaatcatgtttgggaatgtatcgtacctagctca---------cttctgccgcaagttccaaccgctatacgccacggaagctaggagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtccctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccagatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtattgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcaggattccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcagacaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgtcactcacaacctggcagaactatttgggttgaacacaagcttgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattgacccttattactcttgacaccaacgagaagtttagggatattaccaagttcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcatatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgttggtattcacattggtggcaatggcagacagggtttttgcgcaggcctaaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcctaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagagcctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaagtagattttgaacaggccctgttctctaagtatgtgggaaacatactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattgaagcaattagaaattaatacctctcaaatgagtatggaagaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggatacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctacgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattagttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacaccatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacttccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacctggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgcttcaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccccactatgccaatgagggagatccacgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaaacaagaatatgagaagtttgtgagcacaattaggtctgttccagtgggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308428.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/287/2012_complete_genome
----------------------------------------------------caca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgtgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acctttaattatattttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtatgtgcttgacgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgagttcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaggtgaggaatttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaacgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccctgggcgaagcggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccgtggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttggtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggtcagaacacacaggtgagcagtcatcgactggatacgggcaaagttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagcacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctcttcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaactgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtgccattcatgtcacctgcgagcgcttatcaatggttttatgacggatatcccacgttcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggtcctccaagtccaagtaccctctagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaatcagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggcgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagggtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagaccggggtgtactactgtaactcgatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggggatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggtagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgatatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaagatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtatcgtacctagctca---------cttctgccgcaagttccaaccgctatacgccacggaagctaggagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattagggggtcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccagatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgactccgatgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcatacaaaacagatctaggcagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctataagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagtcttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagagatcgcttagcagtccttccacgtcactcacaacctggcaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattgaccctcattactcttgacaccaacgagaagtttagggatattaccaaattcatcccggagaatattagcactgctagtgatgccaccctagtgatcaacacggagcatatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaacaaagagccagctgtcttgcacagtaaagacccccgacttgaagtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattgaagcaattagaaattaatacctctcaaatgagcatggaagaggcctgctacggtactgagaatctagaggctattgatcttcacactagtgcaggatacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctacgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcgggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacaccatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgcttcaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccccactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcccgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaaacaagaatatgagaagtttgtgagcacaattaggtctgtcccagtgggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atct-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686156.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/111/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgtgcct-g-ttttata---c--cccc---c---cccc-c------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaaacaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcaccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgagttcgcaggtcttaggcaggcagtcacgcaaggattccctaccgagctaaaacctggcacaaatcaattcttaaccaccgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaatttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagtaacactcattatagagcacatgcccgagatggagtgtttgactactataccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggacacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaat-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctcttcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaactgctccaatacatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtgccattcatgtcacccgcgagtgcttatcaatggttttatgacggatatcccacgttcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctctagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaaaccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagggtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgcgattgccagacaggggtgtactactgtaactcaatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgtggtggtatccttaggtgccaacatggcgtcgttggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggggatgcttttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaattatctcatagggtctgaaggagcagttgagagaattttgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgactttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcttcctggctcaagaagttcaatgatatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggctcaaggagaagatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtatcgtacctagctca---------cttctgccgcaagttccaaccgctatacgccacggaagctaagagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagatccagatcattttgacggttacaagcaacaggtggttaccgtgatggatgatctgtgccaaaaccccgacggaaaggatatgtctttgttctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatattatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagattcgtacaaaacagatctaggtagactggatgcggggcgagccgctaaactatgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtttatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaaacaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcagacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgtcactcacaacctggcaaaactatttgggttgaacacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattgaccctcattactcttgacaccaacgagaagtttagggatattaccaaatttatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcatatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaagtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcgaaccaattgaagcaattagaaattaatacctctcaaatgagcatggaagaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggatacccttatagtgccttggggattaagaaaagagacatcttagatcctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctacgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggctcactctttgctttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaagacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcccgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaaacaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF543271.1_Enterovirus_A71_isolate_SEP4_complete_genome
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttctaccataaattacaccaccatcaattactacaaagactcttatgctgccacagcaggtaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacattatagtcggttatggtgagtggccttcttactgctcagattctgacgctacggcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcaatgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataagcagacccaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgctagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacaaatcaattcttaaccactgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagcttg------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacgccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttaggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgattggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttcttaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggggcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccatttatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagctaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatctcgtttgggaagacagctctcgcgacttgctcgtgtcatccactaccgcccaaggttgcgacacgattgcccgctgtgattgtcagacaggggtgtactactgtaactcaatgagaaaacactatccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttaggtgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgactacatcaag-ggtctcggagatgcctttggaacaggctttactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattttaaagaatctaattaaactaatctccgcactggtgattgtgatcagaagtgattatgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggattaaagccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcctcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataatttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacatcgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaaacaacaggtggttaccgtaatggatgatctgtgccaaaaccccgacggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattccgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgtagcccattagtgtgcgggaaagctattcaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagcccccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctttttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtccttccacgccactcacaacctggtaaaactatttgggttgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcgttactcttgacaccaacgagaagtttagggatattaccaaattcatccccgaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacagggtttttgcgcaggcctcaaaaggagttacttcgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacattaatggaccaacccgcaccaaattagaacctagtgtattccatgacatcttcgagggagataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctctccattacgcgaaccaattaaagcaattagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaaattctacatggacaagtatggccttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggctagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccccgacacattctggagcaagctgccaattttgctccctggttcactctttgctttcgactactcaggttatgatgccagccttagccccgtctggttcagagcattagaattggttctcagggagatagggtatagcgaagaggcggtctcactcattgagggaatcaatcatacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactactcataaaaacatttaagggcattgacttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccgttcttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaaacaagaatacgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686147.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/39/2011_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata-------ccc---c---cccc--------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----tatcaa----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacgcagcgctccggttctcacgaaaactcgaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaagatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccattaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccctcttactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttataaacagacccaacccggcgccgatggcttcgagctgcaacacccgtacgtgcttgatactggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgctctgaattcgcaggtcttaggcaggcagtcacgcaggggttccccaccgagctaaaacctggcacaaatcaatttctaaccaccgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagctatgtcaggtggaaaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagaggctgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtaccagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacgggcaaggtcccagcactccaagccgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttctatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacattctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccgactggcgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatctaccaccgcccaaggttgcgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacctagcctgatctatgtagaggccagcgaatattacccagccaggtaccaatcacatctcatgctcgcacagggccactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtatccgattacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaattatctcatagggtctgaaggagcagttgagaaaattctaaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattacgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaagtttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgttcgggaacgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtatcactccagtgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatctgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagactttattccaccgatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgactgactcgtacaaaactgatctaggtagactggacgcagggcgcgccgctaaactgtgctctgagaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaaactcccaccaatgtagagcgacaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctgctgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgaacacaaacttgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgataccaacgagaagttcagggatatcaccaaattcatcccggaaaatattagcactgctagtgacgccaccctagtgattaacacggagcacatgccatcaatgtttgtcccggtgggtgatgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctaccaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggtaatggtaggcaaggtttttgcgcaggtctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggtagactcaacatcagtggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagagccggctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattacgcaaaccaattaaagcaactaggaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggccattgatcttcacactagtgcaggttacccttatagtgccttggggattaagaaaagagacatcttagaccctgccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgaactgcgctcggttgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctgaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattttggagcaaactgccaattttgctccctggttcactctttgccttcgactactcaggttatgatgccagccttagccctgtctggtttagagcattagaactggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcacgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagggaaatccatgagtccattcgatggaccaaggacgctcgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttatat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686180.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/97/2012_complete_genome
-------------------------------------------c-acccactcaca-gggcccac-t-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc--------aa-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-ttcccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcgggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gtggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatgttggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatc-----taccaa----tttatt-ggttttgtaccat-----taacctt--------------gaaatctgtgacc-acccttaattatatcttgacccttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacagttccactacctctaccgatcagggttctgtatccacgtgcagtgtaatgccagtaaattccaccaaggagcacttctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggcacgggggcgg------aagatacccaccccccttataagcagacccaacctggcgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggactaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacaccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacccggcacaaatcagtttttaactaccgatgatggcgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagtgaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactatacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccgtggatcagcaacactcattatagagcacatgctcgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaatacagcctacataatagcactagcggcggcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaatacacaggtgagcagtcatcgactggatacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacgctgtgttctcaactcgcacagtacagcagagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagtttacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcgtggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgacgggtatcccacattcggagaacacaaacaggagaaagatcttgagtacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtctaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaattacctattcaaagccaacccaaattatgctggcaa----ctccgttaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagatagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgcgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtactacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactatatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagtagttgagaagattctgaaaaatctaattaaactaatctctgcactggtgattgtgatcagaagtgattacgatatggttaccctcactgcgaccttggcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatcccgatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaataagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattatcgctcgagcaatcgctgataagtaccactccagtgtgtactcgctcccaccagacccggatcattttgatggttacaaacaacaggtagttacagtgatggatgatctgtgtcaaaaccccgatggaaaggatatgtctctattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgagaacaacactgcaaatttcaagcgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagcgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccacccaaattcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagttgtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagcgcttaagaagcctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccagggacatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttggattgaacataaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgagaagtttagggatatcaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtcatcaacacggaacacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgcggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgccagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcagagaggcagctcttcattatgcaaaccaattaaagcaactagaaatcaatacctctcaaatgagcatggaggaggcctgctacggtactgagaaccttgaggctattgatcttcacactagtgcaggttacccttatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaagttaagaaagggaagtcccgtttgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaaccctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttactccctggttcactctttgccttcgactactcaggttatgatgccagcctcagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggttgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggttaattggggtaatgcaaccttcctaaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggatgctcgaaacactcaagaccatgtgcggtccttatgcctcctagcatggcataatggtaagcaagagtatgagaagtttgtgagcacaattaggtctgttccagtaggaagagcgttggctattccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggttgtac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HM245928.1_Human_enterovirus_71_isolate_EV71/Henan/399/2010_complete_genome
---------------ttttaaaaa--cac-cgc-ttgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactttggtacctcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-c-gaaactta-aag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaata-actgc-tcgcgcggttgaagga-aaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcgga-agcttcgttcagca--ctc-cccca---gtgta-atcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aa-agtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagcaattatt-----tacctg----tttatt-ggttttgtaccat-----taatctt--------------gaattctgtgtcc-acccttaattatatcttgattcttaacgcagctaaa-----catgggttcgcaagtatccacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccatcaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattccgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggagtttttgggcagaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctaaaacctggcacaaatcaatttctaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtacccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctacacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatttgggattttgggctgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgatcgagacacgctgtgttctcaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcaggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggcagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatccctagcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactatctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcatcggcatagtgtctactggtggcaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacattaag-ggtctcggagatgcttttgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattctgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcgaccttagcgctgataggttgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgttcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtgccagcagctagggagaaggttgaattcctawataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaacgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtatcactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctatccgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagataggaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaactatttgggttgagcacaaactcgtgaacgtccttgatgcagttgaactagtggatgagcaaggagtcaacctggaattaaccctcattactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggtcaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccacgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagaccctcgacttgaggtagattttgaacaggccctgttctctaagtatgtggggaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgccttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttctcagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaatcacacacatcatgtgtaccgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatccccttgctttaatgaggtcaattggggtaacgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccttttttgattcaccctactatgccaatgagggagatccatgagtccatccgatggaccaaggatgcacgaaacactcaagatcacgtgcggtccttgtgcctcctggcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagctatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-tacac-a-a-aatacacat-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ639384.1_Human_enterovirus_71_isolate_HN318/HN/CHN/2011_complete_genome
--------------ttttaaaaac--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatctcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cctc--------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaaacca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgactcttaacgcagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttacaaaccctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatctgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattccgacgctacagcagtggataaacctacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtctaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttggccaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccaatggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaatttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcagtccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttaggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgctcgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcattagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttctat--------------------------aggagatagcatgagcagagctctcactcacgctctaccagca--------tccacaggccagaacacacaggtgagcagtcatcgactagatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctcaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttaagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcaccttcgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaaaccagattctagggaatcccttgcatggcaaaccgccactaacccctcagttttcgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcgcctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaagcaggagaaagatcttgaatacggagcatgccctaataatatgatgggcacgttctctgtgcggactgtgggaatctccaagtccaagtaccctctagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggagctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcgtccaccaccgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggcaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgatgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattctgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcgaccttagcgttgataggttgtcatggcagtccgtgggcttggatcaaagccagaacagcctccatcttgggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttctaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtatcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtcttattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggaccattttgacggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgtgacattgaagtgacagattcgtacaaaacagatctaggtagactggatgcaggacgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgctgcagcccgttagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaactcattagggaatacaacaataggtccgctattggcaacacaatcgaagctcttttccaaggtccacccaagttcaggccaattaggatt---aaccttgaagaaaaaccagccccggacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtggagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccctactgagaaggaacatcagacaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccattcacaacctggtaaaactatttgggttgagcacaaactcgtgaacgtccttgatgcagttgaattggtagatgagcaaggagtcaacctggaattgacccttattactcttgacatcaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagtactgctagtgatgccaccctagtgattaacacagagcacatgccatcaatgtttgtcccggtgggtgacgttgtacagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggggagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagccgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcccgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactaggaattaatacctctcaaatgaacatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcggttgataaaattaaaaaggggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgccttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaactggttcttagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaagaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcgcgaaacactcaagatcacgtgcggtccttgtgcctcctagcatggcataatggtaaacaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-a-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taaca-a-g-aatacacaggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ316638.1_Human_enterovirus_71_isolate_HQ09231463_complete_sequence
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gtaacttagaag--------------cagta-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttatccggctagctacctcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgcggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatactgacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----tacctg----tttgtt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgaccctcaacgcagctaaa-----catgggttcgcaagtgtccacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcttatgctgccacagcaggcaagcagagtctcaaacaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattccgacgctacagcagtggataaaccaacgcgcccggatgtttcagtaaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttgactgaaactggggtttttgggcaaaatgcacaatttcacttcctctaccgatcagggttctgcatccacgtgcagtgtaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggcacagggacgg------aagatacccaccccccctacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccactgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacactggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcgcctattctaccaaacttccaccccactccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggaaaccattctggaggttaataa----------tgtgcccacgaatgccactagctta------atggaaagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaagtggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatactcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgactgccatgctgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacacgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagtagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctcaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtagagctattcacctacatgcgctttgatgcagagttcacctttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggagtcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagcgcttatcaatggttttatgacggatatcccacatttggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtgggggcctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcatgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagcctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacctgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgactgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttctcaaaacccagcctgatctatgtggaggctagcgagtattacccagccaggtaccaatcacatctcatgcttgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtatctactggtggcaatgggcttgttggctttgcagacgtcagagacctcttgtggttagatgaggaagctatggaacagggcgtgtctgactacatcaag-ggtctcggagatgcttttgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaattctgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcgaccttagcgctgataggtcgtcatggcagtccgtgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacttagctca---------cttctgtcgcaagttccaaccgctatacgccacagaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattagaggctcaccaggcactgggaagtctctagccactggtattattgctcgggcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggaaaggatatgtctttattctgtcaaatggtatccactgtagactttattccaccaatggcttccctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagcaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctagactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccactcaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtg-agaagtgcgccagtactgcaagggatcaaggttggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaggcaagtgcttaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccttactgagaaggaacatcagacaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttggcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaactaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaagttcatcccagaaaatatcagcactgctagtgatgctaccctagtgatcaacacagagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcaatatggctttttaaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggcggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttacttcgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcaagggaagtaaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacattaaagaggcagctctccattatgcaaaccaattaaagcaactagagattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccttggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtctcgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgctaatcctgggacgataactggatcagccgtggggtgcaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgccttcgactactcaggttatgatgccagccttagccctgtctggttcagagcattggaattggttctcagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttacggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatccccttgctttaatgaggtcaattggggtaacgcgaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagggagatccatgagtccatccgatggaccaaggatgcacgaaacacccaagaccatgtgcggtccttgtgcttcctagcatggcataatggtaaacaagaatatgagaagtttgtgagcacaattaggtctgtcccaataggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686145.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/197/2011_complete_genome
-------------------------------------------c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacccttgtgcgcct-g-ttttata------cccc---t---cccc--------ag-t-gaaacttagaag--------------cagca-aaacac-gaccaa-tagcaggcataacgcaccagttatgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggagtccgtgtttcc--tttt---acctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------ggattctgcaacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggctctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagataagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgccgaggcgtgtgggtacagtgatcgagtggcgcaattaactattggtaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcgcaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctatcctaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcatcccgatatcacagttaacagtgtgcccccaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgctttgaatcattgcaactttggcctgttggtggtgcctattagcccactagactatgaccaaggagcgacaccggtgatccccataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttgaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggcgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagttatgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttatgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggtacgcacgtcatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtaccagacaaattacgtggttccgatcggtgcacccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagcgatatcctgcaaacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacagggcagaacacacaggtgagcagtcatcgactggatacaggcaaagttccagcactccaagctgctgaaattggagcatcgtcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacgggttacgcgcaaatgcgtagaaaggtagagttattcacctacatgcgctttgatgcagagttcacttttgttgcgtgtacacccaccggggaagttgtcccacaattgctccaatacatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgctactaacccctcggtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataatatgatgggcacgttctcagtgcggaccgtgggaacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctatttaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccactgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacattacccagtcagtttttcaaaacccagcctgatctatgtgggggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtattcttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgttagagacctcttgtggttagatgaggaagctatggaacagggtgtgtccgactacatcaag-ggtcttggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaggctctcaagaactatcttatagggtctgaaggagcagttgagaaagtcttgaaaaatcttattaaactaatttctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcttccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccagcgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgactggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctactagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagctactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggtcacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaataacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaacagatccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaacccgccccagacgctattagcgatctcctcactagcgtagatagtgaagaagtgcgtcagtattgc-agggatcaaggctggattattcctgaagttcccaccaatgtggagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacaatagtggcggttgtctcattggtgtatgttatctataagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctattgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttggcggtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagttaacctggagttaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtaattaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgtaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggtagacaaggtttttgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcctaacaaagaaactggaagacttaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacgtcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattgaagcaactagaaattaatacctctcagatgagcatggaggaagcctgctacggtactgagaatcttgaggctattgatcttcaaactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctgccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggctagtagcctaaacgattcagtgtaccttagaatggcctttggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggatcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattggaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgaggggatcaaccacacacatcatgtgtatcgtaacaagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgcttcaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtacggtccttgtgcctcctagcatggcataatggcaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatctcagacgcaattggctcgaattgtttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC296445.1_Enterovirus_A71_strain_HCM120-VNM-2011_complete_genome
----------------------------------------------------------------------gcgctagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---t---cccc--------ag-t-gaaacttagaag--------------cagca-aaacac-gaccaa-tagcaggcataacgcaccagttatgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagctagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggagtccgtgtttcc--tttt---aactttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------ggattctgtaacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggctctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcaccgaaatggcagcgccactgaagtccccatccgccgaggcgtgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattccgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggaaaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcgcaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggcacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccccaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgctttgaatcattgcaactttggcctgttggtagtgcctattagcccactagactatgaccaaggagcgacgccagtgatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcagtttttgaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggcgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagttatgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttatgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggtacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtaccagacaaattacgtggttccgatcggtgcacccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcaaacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacagggcagaacacacaggtgagcagtcatcgactggatacaggcaaagttccagcactccaagctgctgaaattggagcatcgtcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacgggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgtacacccaccggggaagttgtcccacaattgctccaatacatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgctaccaacccctcggtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataatatgatgggcacgttctcagtgcggaccgtgggaacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctatttaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccactgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacattacccagtcagtttttcaaaacccagcctgatctatgtgggggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagatgttagagacctcttgtggttagatgaggaagctatggaacagggtgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaggctctcaagaactatcttatagggtctgaaggagcagttgagaaagtcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccagcgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgactggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctactagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggtcacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatattatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaataacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatacagcaacaggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaacccgccccagacgctattagcgatctcctcgctagcgtagatagtgaagaagtgcgtcagtattgc-agggatcaaggctggattattcctgaagttcccaccaatgtggagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacaatagtggcggttgtctcattggtgtatgttatctataagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctattgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttggcggtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagttaacctggagttaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtaattaatacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgtaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacgtctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaacaaagaaactggaagacttaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacgtcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattgaagcaactagaaattaatacctctcaaatgagcatggaggatgcctgctacggtactgagaatcttgaggctattgatcttcaaactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctgccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtaccttagaatggcctttggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggatcactctttgcctttgattactcaggttatgatgccagccttagccctgtctggttcagagcgttggaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgaggggatcaaccacacacatcatgtgtatcgtaacaagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgcttcaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttacccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtacggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattagatctgtcccagtaggaagagcgttggctatcccaaattatgaaaatctcagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaacc-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU936127.1_Enterovirus_A71_strain_SHAPHC5589/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---t---cccc-t------at-t-gtaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacaatccagttatgtctcga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ctccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtga-cccatggggcgctctaatacagacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaaacca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgtaacagagcgatcatt-----tacctg----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattacatcttgactcttaacacagctaaa-----catgggttcgcaagtgtctactcagcgctccggttctcacgagaactcaaactcagccactg-agggttctaccataaattatactaccatcaattactacaaagactcctacgctgccacagcaggcaaacagagtctcaagcaggacccagacaagtttgcaaatcctgttaaagacatcttcaccgaaatggcagcaccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattgactataggcaactctaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataagccaacgcgcccggatgtttcagtgaacaggttttacacattagacactaaattgtgggagaaat------------------cgtccaaggggtggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgccgtcttaccagagtatgtcattgggacagtggcaggcggtgcagggacag------aagatacccaccccccttacaagcagactcaacctggcgccgatggcttcgagttgcagcacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggtctgttagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacgaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgttagagttatgccaggtggagaccattctggaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaggcag------ggaagggtgagctgtgtgcagtgtttagagccgatcctgggcgaaacggaccatggcaatccactttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggtcccctgcccaaagaccgggcgaccgccatgttgggtacgcacgttatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgttcgactactacaccacaggattagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcttatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagacaga--------gtggcagatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcacacacgctttgccagca--------cccacaggccagaacacacaggtgagcagtcaccgactggatacaggcaaggttccagcactccaagctgctgaaattggtgcatcttcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcggggttagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgcaggaaggtagagctatttacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaactgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgccactaacccctcagtttttgttaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcagtggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggtacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccaaaactatctattcaaagccaatccaaattatgctggcaa----ctccatcaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggagctatttatgtgggcaactttagagtggtcaaccgacatcttgccacccacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgctcaaggttgtgacacgattgctcgttgcgattgccaaacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttctcaaaacccagtctgatttatgtagaggctagcgagtattacccagctaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgttggcatagtgtctactggtggtaatgggctcgttggctttgcagacgttagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggaacaggcttcaccgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtatccctatcgctcaaaaacagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggagcaatctgctgcctcacaagaggatcttgaagtcatgtttgggaatgtgtcgtacctggctca---------cttctgtcgcaagtttcaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctaccaccagacccggatcattttgatggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccacagtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgactctgacgctattcgccgcagattctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaattatgctctgaaaacaacactgcaaatttcaaacgttgcagtccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcaggtacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaggtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagggcggtgcttgtcatgcaatctatcgccacagtagtggcggttgtttcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagcctcgactttgctctctccctactgaggaggaatatcaggcaagtccaaacggaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaagctcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcgtcactcttgataccaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcgatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctaccaaggcaggacagtgtggaggggtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagagcctagtgtgttccatgatatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtatatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcatgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggctacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaaatatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgacaaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgactcagtgtacctcagaatggctttcggacatttgtatgagactttccatgcaaatcctgggacgataactgggtcagctgtggggtgtaaccctgatacattctggagcaagctgccaattttgctccctggctcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagagagatagggtatagtgaagaggcaatctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgatcaataacattattatcagagcactgcttataaagacatttaagggtattgatttggacgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagctaagactggtaaggagtatggtctgaccatgactcctgctgataaatccccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctacaatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggccatcccaaattatgaaaatcttagacgcaattggctcgaattgtttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ129932.1_Human_enterovirus_71_strain_BJ06-SJS06_polyprotein_gene_complete_cds
----------------------------------------------------cgca--------------------gcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtctcga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctaccgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc-ttttt---ttctttatattggctgcttatggtgacaattgaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagactgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattattacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggacccagacaagtttgcaaatcctgttaaggacattttcactgaaatggcagcgccactgaagtccccgtccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgctaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctgccagagtacgtcattgggacagtggcaggcggtacaggtacgg------aagacagtcaccccccttacaagcagactcaacctggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggactaacaattgcgctacaataatagtgccatacatcaacgcactgccttttgattctgccttgaaccattgcaacttcggcttattagttgtgcctattagcccactagattacgaccaaggagcaacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtagagaccattctggaggttaataa----------cgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgaccctgggcgaaatggaccgtggcagtccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcactggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggattagcaacactcactatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacgaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagtagagtcctcactcaagctctgccagca--------cccacaggccagaatacacaggtgagcagccatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgtccttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttatgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccactggggaagttgtcccacaattgctccaatacatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcatggcaaaccgccaccaacccctcagtttttgtcaagttgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttatatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccaaaattacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---cactac---------------------------------------tcttgga------------------------------------------aaatttgggcaacagtctggggccatttatgtgggcaactttagagtggtcaaccgccatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaagcccagcctgatctatgtagaggctagcgagtactacccagccaggtatcaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgttggtatagtgtctactggtggtaacgggctcgttggctttgcagacgtcagggacctcttgtggttagacgaagaagctatggagcagggcgtgtccgactacatcaaa-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggcatccctatcgctcaaaagcaaagcgcttcctggctcaagaaatttaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagaaaatcagatctcaaacttggaacaatctgctgcctcacaagaggacctcgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggcatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcacttccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccctgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttcccttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccactaacatcatagtgccaacagtgtctgattctgacgctattcgccgcaggttctacatggattgcgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctattcaacttagagatagaaagtctaaagtcagatacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcagtgcttgtcatgcaatctatcgctacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtactctggtgctcctaagcaagtgcttaagaaacctgttcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctactgaggaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgagaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcctgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaagattatcggtattcacattggtggcaatggcagacaaggcttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagagcctagtgtattccacgacatcttcgagggaaataaggagccagctgtcttgcacagtaaagacccccgacttgaggtggattttgaacaagccctgttctctaagtatgtgggaaatacactatatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcagctagaaattaacacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgaccttcataccagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagctgcgctcaattgataagattaagaaagggaagtcccgtctgattgaggccagtagtttaaatgattcagtgtacctcagaatggctttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagcctcagccctgtctggttcagagcattagaattggtccttagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaaccacacacaccatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaagacatttaagggcattgacttagatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgctcggagttagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtctccttgctttaatgagattaattggggtaatgcgaccttccttaagaggggctttttacccgatgaacaatttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccaataggaagagtgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaacac-cacccgcc-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289425.1_Enterovirus_A71_isolate_EV71/P352/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------tagca-aaccac-gatcaa-cagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gtggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagcaattatt-----taccta----tttatt-ggttttgttccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgaccctcaatacagctaaa-----catgggttcgcaagtgtccgcacagcgctccggttctcacgaaaactcaaactcagccactg-agggctctaccataaactacaccaccattaattactacaaagactcctacgctgccacagcaggcaaacagagtctcaagcaggatccagacaagttcgcaaatcctgtcaaagacattttcactgaaatggcagcaccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtagcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacattatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggacaaaccaacgcgcccggatgtttcagtgaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccattacctctaccgatcagggttctgcatccacgtgcagtgtaatgctagtaaatttcaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagacacccaccccccttacaagcagactcaacccagcgccgacggcttcgagttgcaacacccgtatgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccgcaccagtggattaatttgaggaccaacaattgcgctacaataatagtgccatatattaacgctctgccttttgattctgccttgaaccattgcaatttcggcctgttagttgtgcctattagcccactagactacgaccaaggggcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctaaaacctggcacaaatcaatttctaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccctaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggaaaccatcctggaggttaacaa----------tgtacccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------gaaaaggtgagctgtgtgcggtgtttagagctgatcctgggcgaaatggaccatggcaatccactttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaggtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggtcctctgcctaaagaccgggcgaccgccatgttgggcacgcacgtcatctgggatttcgggctgcaatcgtctgtcacccttgtaataccatggatcagcaatactcactatagagcacatgcccgagatggagtgttcgactactacaccacaggattagtcagtatatggtatcagacaaattatgtggttccaatcggtgcacccaacacagcctatataatagcactagcagcagctcaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctacagacgggcaccatccagggcgatagg--------gtagcagatgtaattg---aaagttccat--------------------------aggagatagcgtaagcagagctctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggacacgggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtcctcaactcgcacagtacagctgagactactctagatagtttcttcagtagggcgggattggttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctatatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagactctagggaatctcttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcaagtgcttatcaatggttttacgatggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtagttaggatttacatgagaatgaagcacgtcagggcgtgggtacctcgcccgatgcgtaaccagaactacctgttcaaagccaacccaaattatgctggcag----ctccattaagccaaccggtgccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggagccatttatgtgggcaactttagagtagtcaatcgacatctagccactcacagtgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcgactgccagacaggggtgtactactgtaactcgatgagaaagcactacccagttagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccagcatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggagcagggcgtgtccgactacattaag-ggtctcggagatgcttttggaacgggcttcactgacgcagtctcaagggaggttgaagctctcaagaattatcttatagggtctgaaggggcagttgagaaaatcttgaaaaaccttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggcatccctattgcacaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaattcattgattggcttaaggagaaaatagtgccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaacgtatcttacctagctca---------cttctgtcgcaagttccaaccactatacgccacggaagctaaaagagtctatgctctggagaagagaatgaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgagaagtctttagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgatggaaaggatatgtctttatttggccaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctatccgccgcaggttctacatggactgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagataggaagtctaaagtcagatacagtgtggacacagtggtttcagaacttattagggaatacagtaataggtccgccattggcaacacgatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgaccttcttgctagcgtagatagtgaagaagttcgccagtactgc-agggatcaaggctggattattcctgaagctcctaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgctacagtggtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtactctggtgctcctaagcaagtgcttaagaaacctgttcttcgcacagcaacagtgcagggtccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccagggccatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccttagttatcaacacggagcatatgccatcaatgtttgtcccggtgggtgacgttgtacagtatggctttttgaatcttagtggtaagcctacccatcgcaccatgatgtacaactttcccactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagcgaacaaggagagatccagtgggttaagcctaataaagatactggaagactcaacataaatggaccaacccgcaccaagttagaacctagtgtgtttcacgacatcttcgaggggaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagatttcgaacaggccctgttctccaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcggctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctatggtactgagaaccttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttggaccctaccaccagggacgtgagtagaatgaaattctacatggacaagtatggtcttgatctcccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtttaaatgattcagtgtacctcagaatggctttcgggcatttgtatgaggctttccacgcaaatcctgggacgataactgggtcggccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgattactcaggttatgatgccagccttagccctgtctggtttagagcattagaattggtccttagggagatagggtatagtgaggaggcgatctcactcattgagggaatcaaccacacacaccatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccattttcaacacaatgatcaataacattattattagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatgatcgcttatggggacgatgtgctcgctagctatcccttcccaattgattgctcggaactagcaaacactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttctgcccgatgaacagtttccattcttgattcaccccactatgccgatgagggagatccatgagtccattcgatggaccaaggacgcacgaagcactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggcaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcattggctatcccaaattatgaaaatctcagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ639383.1_Human_enterovirus_71_isolate_HN1360/HN/CHN/2011_complete_genome
----------------ttttaaaaaccag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca------cccc---c---cccc-t------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgtaatagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatattttgacccttaacacagctaaa-----catgggttcgcaagtgtccacacagcgctccggttctcacgaaaactcaaactcagccactg-agggctctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacattttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagcgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacattatagtcggttatggtgagtggccttcctactgctcagattctgatgctacagcagtggataaaccaacgcgcccggacgtttcagtgaacaggttttacacattggacactaaattgtgggaaaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcttagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagacacccaccccccttacaagcagactcaacccggcgccgacggcttcgagttgcaacatccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgcgctacaataatagtgccatatattaacgccctgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaattcctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcggtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttccctgtctcagcacaagcag------gaaaaggtgagctgtgtgcggtgtttagagctgatcctgggcgagatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaggtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctacccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaatactcattatagagcacatgcccgagatggagtgttcgactactacaccacaggattagtcagtatatggtatcagacaaattacgtggttccaatcggtgcacccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtaagcagagccctcactcacgccctaccagca--------cccacgggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttctcaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttaagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctatatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccgcctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcaagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaattacctgttcaaagccaacccaaattatgctggcag----ctccattaagccaactggtgtcagtcgtacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatctggagctatttatgtgggcaactttagagtggtcaatcgacatctagccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgatttgctcgtgtcatccaccaccgcccaaggctgtgacacgattgcccgttgcgattgccagacaggggtgtactactgcaactcgatgagaaagcactacccagttagtttttcaaagcccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgtcaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacattaag-ggcctcggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaattatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcctaggtatccctatcgctcagaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaacgtgtcatacctagctca---------cttctgtcgcaagttccaaccactatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtcttattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggaccattttgacggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcatataaaacagatctaggtagactggatgcagggcgagccgctaaactatgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagccatccagcttagagatagaaagtctaaagtcagatacagcgtggatacggtggtttcagaacttattagggaatacagcagtaggtccgccattggcaacacgatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcctaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgctacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccagggccatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaacttgtgaacatccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatatcagcactgttagtgatgccaccctagtgattaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtacagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcccactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggtctcaagaggagttactttgctagtgaacaaggagagatccagtgggttaagcctaataaagaaactggaagactcaacataaacggaccaacccgcaccaagttagaacctagtgtgtttcacgacatcttcgaggggaataaagaaccggctgttttgcacagtaaagacccccgacttgaggtggattttgaacaggccctgttctccaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcggctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctatggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctgggcataaagaaaagagacatcttagaccctactaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgaactgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggttttcgggcatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaaccccgacacattctggagcaagctgccaattttgctccctggttcactttttgcctttgactactcaggttatgatgccagccttagtcctgtctggttcagagcattagaactggtccttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtatatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgatcaacaacattattattagggcactactcataaaaacatttaagggcattgatttggatgaactcaacatgatcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgctcggaactagctaagactggtaaggagtatggtctaaccatgactcctgctgataaatctccttgcttcaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatctcagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-tacca-g-a-aatacacaggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU936126.1_Enterovirus_A71_strain_SHAPHC5510/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aactac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcatt-----taccta----tttatt-ggttttgtaccat-----taactct--------------gaattctgtgacc-acccttaattatatcctgacccttaatacagctaaa-----catgggttcgcaagtgtccgcacagcgctctggttctcacgaaaactcaaattcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacaaagcctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgggtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgaatggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccagatgtttcagtgaacaggttttacacattggacactaaattgtgggaaaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgagactggggtttttgggcaaaacgcacaattccactacctctaccggtcagggttctgcatccacgtgcagtgcaatgctagtaaattccatcaaggagcacttttagtcgctgtccttccagagtatgtcatcgggacagtggcaggcggtacagggacgg------aagatacccaccctccttataaacagactcaacccggcgccgatggcttcgagttgcagcacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccaatggatcaatttgaggactaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagtccactagactatgaccaaggggcgacgccagtaatccctataactattacattagccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcagtttttaaccaccgatgacggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacctgctagagttatgccaggtggaaaccattctagaggttaataa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcgcaagcag------ggaagggtgagttgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttatgcgggtactacacccagtggtcaggatcactggaagtcaccttcatgtttactggatctttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggatttcgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacacccattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattatgtggttccaatcggtgcgcccaacacggcctatataatagcattagcggcagctcaaaagaacttcactatgaaattgtgcaaggatgccagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatag---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaatcggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgacagtttcttcagcagggcgggattggttggggagatagatctccctcttgagggcacgac-taacccaaatggttatgccaactgggacatagatataacaggttatgcgcaaatgcgtagaaaggtagaactattcacctacatgcgctttgatgcagagttcacctttgttgcatgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccccaaaccagattcaagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcggtaccattcatgtcacctgcgagtgcttatcaatggttctatgacggatatcccacatttggggaacataaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctctaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgttagggcgtggatacctcgcccgatgcgtaatcagaactacttattcaaagccaacccaaattacgctggcag----ctccattaagccaactggtactagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggctatttatgtgggcaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtctgggaagacagctctcgtgacttgcttgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgactgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacctagcctgatttatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacaaggtcactcagaacctggtgattgcggtggtatcctcagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatggactcgttggctttgctgacgtcagggacctcttgtggttagatgaagaagctatggaacagggtgtgtccgactatatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctctagggaggttgaagctctcaaaaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgatagtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtctccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagaaaatcagatctcaaacttggaacagtctgctgcctcacaagaggaccttgaagttatgtttgggaatgtgtcgtacctagccca---------cttctgtcgtaagttccaaccgttatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggacatgtctttattctgtcaaatggtgtccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaataccgcaaatttcaaacgttgcagcccattggtgtgtgggaaagctatccaactcagagatagaaagtctaaagtcagatacagtgtggacacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaattgaggctcttttccaaggcccacccaagttcaggccaattaggatc---agccttgaggaaaagccagccccagatgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccattgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaatatcaggcaagttcaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtaaacatccttgatgcagttgaactggtggacgagcaaggagtcaacctggaattaactctcatcactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagagaacattagtgctgctagtgatgccactctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggcgacgttgtgcagtatggctttttgaatctcagtggcaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttattggtattcacattggtggcaatggcaggcaaggtttttgcgcaggcctcaaacggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagcaaagaccctcgacttgaggtagacttcgagcaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggaactgagaatcttgaggcaattgatcttcacactagtgcaggttacccctacagtgccctggggataaagaagagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggataagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgagactttccacgcaaatcctgggacgataactggatcagccgtagggtgtaaccctgacacattttggagcaagctgccaatcttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatggtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtatatcgcaataagacctattgtgtgcttggtgggatgccctcaggctgctcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggtattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctaccccttcccaattgattgcctggaattagcaaagactggtaaggagtatggcctgaccatgactcctgctgataaatccccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgaaatccacgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagtacaattaggtctgtcccagtgggaagagcgttggctattccaaattatgaaaatcttagacgtaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-cactagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM402021.1_Enterovirus_A_strain_S0102b/EV71/2013/CHN_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactttggtatcttggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aactac-gatcaa-tagcaggcataacactccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taactct--------------gaattctgtgacc-actcttaattatatcctgacccttaacacagctaaa-----catgggttcgcaagtgtccgcacagcgctctggttctcacgaaaactcaaattcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacaaagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgggtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgaatggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccagatgtttcagtgaacaggttttacacattggacactaaattgtgggaaaaat------------------cgtccaagggatggtactggaagttcccggatgttttaactgagactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtacagtgcaatgctagcaaattccatcaaggagcacttctagtcgctgtccttccagagtacgtcatcggaacagtggcaggcggtacagggacgg------aagacacccaccctccttataagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccaatggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagtccactagactatgaccaaggggcgacgccagtaatccctataactattacactggccccaatgtgttctgaattcgcaggtctcaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcagtttttaaccaccgatgacggcgtttcagcgcctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacctgctagagttatgccaggtggaaaccattctagaggttaataa----------tgtgcccacgaatgccactagctta------atggagaggctgcgcttcccggtctcagcgcaagcag------ggaagggtgagttgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccagtggtcaggatcattggaagtcaccttcatgtttactggatctttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggatttcgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacacccattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattatgtggtcccaatcggtgcgcccaacacggcctatataatagcattagcggcagctcaaaagaacttcactatgaaattgtgcaaggatgccagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaatag---aaagctccat--------------------------aggagatagcgtgagcagagcccttactcgcgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaatcggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgacagtttcttcagcagggcgggattggttggggagatagatctccctcttgagggcacaac-taacccaaatggttacgccaactgggacatagatataacaggttatgcgcaaatgcgtagaaaggtagaactattcacctacatgcgctttgatgcagagttcacctttgttgcatgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaaaccagattcaagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcggtaccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggggaacataaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctctaagtccaagcaccctttagtggttaggatctacatgagaatgaagcacgttagggcgtgtatacctcgcccgatgcgtaatcagaactacttattcaaagccaacccaaattacgctggcag----ctccattaagccaactggtgctagtcgcacagcaat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtctgggaggacagctctcgtgacttgcttgtgtcatccaccaccgcccaaggttgtgacacgatcgctcgttgcgactgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacctagcttgatctatgtagaggctagtgagtattacccagccaggtaccaatcacatctcatgcttgcacaaggtcactcagaacctggtgattgcggtggtatcctcagatgccaacatggcgtcgttggcatagtgtctactggtggtaatggactcgttggctttgctgacgttagagacctcttgtggttagatgaagaagccatggaacagggtgtgtccgactatatcaag-ggtctcggagatgcttttggaacaggcttcactgatgcagtctctagggaggttgaagctctaaaaaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtaatagtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgctgctaaggggttagagtgggtctccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagaaaatcagatctcaaacttggaacagtctgctgcctcacaagaggaccttgaagttatgtttgggaatgtgtcgtacctagccca---------cttctgtcgtaagttccaaccgttatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggtactgggaagtctctagccactggtattattactcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaaacaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttccctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacaccgcaaatttcaaacgttgcagcccattggtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggacacggtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaattgaggctcttttccaaggcccacccaagttcaggccaattaggatc---agccttgaggaaaagccagccccagatgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggaccaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtaaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaactctcatcactcttgacaccaacgaaaagtttagggatatcaccaaattcatcccagagaacattagtgctgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctacaaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttattggtattcacattggtggcaatggcaggcaaggtttttgcgcaggcctcaaacggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagattcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagcaaagacccccgacttgaggtagacttcgagcaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggaactgagaatcttgaggcaattgatcttcacactagtgcaggttacccctacagtgccctggggataaagaagagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggccttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattttggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatggtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtatatcgcaataagacctattgtgtgcttggtgggatgccctcaggctgctcgggaacatccattttcaactcaatgattaataacattattatcagaacactgctcataaaaacatttaagggtattgatttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctaccccttcccaattgattgcctggaattagcaaagactggtaaggagtatggcctgaccatgactcctgctgataaatccccttgctttaatgaggttaattggggtaatgcgaccttcctcaaaaggggctttctgcccgatgaacagtttccattcttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagtacaattaggtctgttccagtgggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-cgccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-g-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aa-------------------------------------------------------------------------------------------------------------------------------
>KJ400360.1_Enterovirus_A71_strain_Rostov_complete_genome
-----------------------------------------------------------------------cgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gtaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtctcga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccgaccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattgaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtgccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagccaaa-----catgggttcacaagtgtctacacagcgctccggttctcacgagaactcaaactcagccactg-agggttctaccataaactacactaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagatatctttactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtagcacagttaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtagataaaccaacgcgcccggatgtttcagtgaacaggttttatacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccagacgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagcaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcgggcggtacaggaacgg------aagatacccaccccccttacaagcagactcaacccggcgctgacggcttcgagttacaacatccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactaccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcccattagcccactagactacgaccaaggagcgacaccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacccattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaatttgctagagttatgccaggtggagaccattctggaggttaataa----------tgtgcccacaaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagctgaccctgggcgaaacggaccatggcaatccaccttactgggtcagttatgcgggtattatacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcctctacccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacaggattggtcagtatatggtatcagacaaattacgtggttccaatcggtgcacccaacacagcctacataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtgattg---aaagttctat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagtagtcatcgactggatacaggcaaggttccagcgctccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgaaacacgctgtgttcttaattcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacgcccaccggggaagttgtcccacaattgctccaatatatgtttgtaccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacataaacaggagaaggatcttgaatacggggcatgtcctaataacatgatgggcacattctcagtgcggacagtggggacctctaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctattcaaagccaacccaaattatgctggcaa----ctctattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctgtttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagttctcgcgacttgctcgtgtcatccaccaccgctcaaggttgtgacacgattgcccgttgcgattgccagacaggagtgtactactgtaactctatgaggaaacactacccagttagtttttcaaaacccagcctgatctatgtggatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcgcagggtcactcagaacctggtgactgtggtggcatccttagatgccaacatggtgttatcggcatagtgtccactggtggcaatgggctcgttggctttgcagacgtcagagatctcttgtggctggatgaagaagctatggagcagggcgtgtccgactatatcaag-ggtctcggagatgcttttggaacaggcttcactgacgcagtctcaagagaggttgaagctctcaagaactaccttgtagggtctgaaggagcagttgagaaaattttgaaaaatctcattaaactaatctctgcactggtgattgtgatcaggagtgattacgacatggtcaccctcactgcaaccttagcgctgataggctgtcatggtagtccttgggcttggatcaaagccaaaacagcctccatcttaggcatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaacgacatggccagcgccgctaaggggttagagtgggtttccaacaagattagcaaatttattgattggcttaaggagaaaatagtgccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagaaaatcagatctcaaacttggaacaatctgctgcttcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagcaaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctggccactggtattattgctcgggcaattgctgataagtaccactccagtgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatctaccgtagactttattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagttcgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgatattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactatgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaaatctaaagtcagatacagcgtggatacggtggtttcagaacttattagggaatacaacaataggtccgccattggcaacacgatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatcttcttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaagctcctaccaacatagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcatattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacattaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaatttatcccagaaaacatcagcactgctagtgatgccaccctagtgatcaacacggagcacatgccgtcaatgtttgtcccggtgggtgacgttgtgcagtatggctttctgaatctcagtggtaagcctactcatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaagattgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggtgaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccacgacatcttcgagggaaataaagagccagctgttttgcacagtaaagacccccgacttgaggtagatttcgaacaggccctgttctctaagtatgtgggaaacacactacacgagcccgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaacacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacaccagtgcaggttatccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttttatatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgcctgattgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggccttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagcctcagccctgtctggttcagagcattggaattggttcttagggagataggatatagtgaagaggcaatctcactcatcgagggaattaaccacacacatcatgtatatcgcaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaaaggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctaccccttcccaattgattgtttggaactagcaaagactggcaaggagtacggtttgaccatgactcctgctgataaatctccttgctttaatgaggtaaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttctgattcaccccaccatgccaatgaaggagatccatgagtccattcgatggaccaaggacgcacgaaacacacaagatcatgtgcggtccttgtgcctcctagcatggcacaacggtaagcaagaatatgagaagtttgtgagtacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggtcatac-------------------------atac---------------ctcaacct-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU936120.1_Enterovirus_A71_strain_SHAPHC5218/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacatgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgtaacagagcaattgtt-----tacctg----tttatt-ggttttgtgccat-----taacctt--------------gaattctgtgacc-acccttaattacatcttgactcttaatacagctaaa-----catgggttcgcaagtgtctacacagcgctccggctcacacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggacccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcagttaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccctcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaaggggtggtattggaagttcccggacgtgttaacagaaactggggtttttggccaaaatgcacaattccactacctctaccgatcagggttctgcattcacgtgcagtgcaatgccagcaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcaaactcaacccggcgccgacggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtaccatacatcaatgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccagggagcgacgccagtaatccctataactatcacactggccccaatgtgttctgagttcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagttaaagcctggcacaaatcaatttttaaccaccgatgacggcgtttcagcacccattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccatcctggaggttaacaa----------tgtgcccacgaacgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaagtggaccatggcaatccaccttactaggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttactttcatgtttactggatccttcatggccaccggtaagatgctcatagcctatacaccaccgggaggtcctctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggattttggactgcaatcgtctgtcacccttgtaataccatggatcagtaacactcattatagagcacatgcccgagatggagtatttgattactataccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcactattcagggggatagg--------gtggcggatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacgggtgagcagtcatcgactggacacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgtccttaattcgcacagcacagctgaaaccactcttgatagtttcttcagtagggcggggttagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcagatgcgtagaaaggtagagctgttcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatacatgtttgtaccacctggagcccctaagccagattctagggaatctcttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaagtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacatttggagaacacaagcaggagaaggatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtgggaacctccaagtctaagtaccccttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctgttcaaagccaacccgaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatctatgtgggcaactttagagtggttaaccgacatctagctactcacaatgattgggcaaatcttgtatgggaagacagctctcgcgacttgctcgtgtcatccaccaccgctcagggctgtgacacgattgcccgttgcaattgccagacaggggtgtactactgtaactctatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacccggtgactgtggtggtatccttagatgccaacatggtgtcatcggcatagtgtctactggtggtaatgggctcgttggttttgccgacgtcagagatctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggggatgcttttggaacaggtttcacggacgcggtctcaagggaggttgaagctctcaaaagctatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcaggagtgactacgacatggttaccctcactgcaaccttagcgctgataggctgccatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggcatccctatcgctcaaaagcagagcgcttcttggctcaagaagttcaatgacatggccaacgccgccaaggggttagagtgggtttccaacaagatcagcaaatttattgattggtttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ttgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccactatacgccacggaagctagaagagtctacaccctggagaagagaatgaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattatcaggggctcaccaggcactgggaaatctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctctattctgtcagatggtatccaccgtagatttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttttacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagattggatgcagggcgagctgctaaactgtgctctgaaaataacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtttcagaacttattagggaatacagcaataggtccgccattggtaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaagatc---agtcttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtttcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgctcaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgctgggcgttagggaccgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagttaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggaacacatgccgtcaatgttcgtcccggtaggtgatgttgtgcagtatggctttttgaatctcagtggtaagcctactcatcgcaccatgatgtataactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggcggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagaaatccagtgggttaagcccaataaagaaactggaagacttaacatcaatggaccaacccgtaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtagagacccccgacttgaggtagattttgaacaggccctgttctctaagtacgtgggaaacacactacatgagcctgacgagtacatcaaagaagcagctcttcattatgcaaatcaattaaagcaactagaaattgatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagcgcaggttacccctatagtgccctggggataaagaagagagatatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgatcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagcctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggttttccatgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcttttgactactcaggttatgacgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggatgttcaggaacttccatcttcaactcaatgatcaataacattattatcagggcactgctcatcaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagatgatgtgctcgctagctacccctttccaattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgacgcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgacctttctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccacgagtccattcgatggaccaaagacgcacgaaacactcaagatcacgtgcggtccttgtgcctcctagcatggcataatggcaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcattagctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttacac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT008670.1_Enterovirus_A71_strain_11/EV71/Wenzhou/CHN/2014_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggggcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaac--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccatttatgtcttga-tcaagcatttctg-tttccccggactgagtatcaataaactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcgggaaacc-tattaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtccccgca-ttccccacgggcgaccgtggcggtggctgcgttggctgccggcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aaaagtctactgagctatttggtactcctccggcccctgaatgcggttaatcccaactgcggagcacacgcccacaatcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttacattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtgccat-----taacctt--------------gaattctgtgacc-acccttaattacatcttgactcttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggctctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgctacagcaggcaaacagagtctcaagcaggacccagacaagttcgcaaatcctgttaaagacatcttcactgaaatggcggcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcagttaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtattggaagttcccggacgtgttaacagaaactggggtttttggccaaaatgcacaattccactacctctaccgatcagggttctgcattcacgtgcagtgcaatgccagcaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcaaactcaacccggcgccgacggtttcgagttgcaacacccgtacgtacttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtaccatacatcaatgcactgccttttgactctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccagggagcgacgccagtaatccctataactatcacactggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagttaaagcctggcacaaatcaatttttaaccaccgatgacggcgtttcagcacctattctaccaaacttccaccctaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaacgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaagtggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttactttcatgtttactggatccttcatggccaccggtaagatgctcatagcctatacaccaccgggaggtcctctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggattttggactgcaatcgtctgttacccttgtaataccatggattagtaacactcattatagagcacatgcccgagatggagtgtttgattactataccacagggttagtcagtatatggtatcaaacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcactatccagggagatagg--------gtggcggatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcacccacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggacacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgtccttaactcgcacagcacagctgaaaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcagatgcgtagaaaggtagagctgttcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtaccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaagtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacatttggagaacacaaacaggagaaggatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtgggaacctccaagtctaagtaccccttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctgttcaaagccaacccgaattatgctggtaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggttaaccgacatctagctactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccagggttgtgacacgattgcccgttgcaattgccagacaggggtgtattactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggttactcagaacccggtgactgtggtggtatccttagatgccaacatggtgtcatcggcatagtgtctactggtggtaatgggctcgttggttttgccgacgtcagagatctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggggatgcttttggaacaggtttcactgacgcggtctcaagggaggttgaagctctcaaaagctatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcattggtgattgtgatcaggagtgactacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgccaaggggttagagtgggtttctaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ttgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccactatacgccacggaagctagaagagtctacaccctggagaagagaatgagtaactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattatcaggggctcaccaggcactgggaaatctctagccactggtattattgctcgagcaattgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctctattctgtcagatggtatccaccgtagatttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttttacatggactgtgacattgaagtgacggactcgtacaaaacagatctaggtagattggatgcagggcgagctgctaaactgtgctctgaaaataacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaagatc---agtcttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttgtgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgctcaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgctgggcgttagggaccgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacatccttgatgcagttgaactggtggatgagcaaggagttaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaagttcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggaacacatgccgtcaatgttcgtcccggtaggtgatgttgtgcagtatggctttttgaatctcagtggtaagcccactcatcgcaccatgatgtataactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggcggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagaaatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtacgtgggaaacacactacatgagcctgacgagtacatcaaagaagcagctcttcattatgcaaatcaattaaagcaactagaaattgatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagcgcaggttacccctatagtgccctggggataaagaagagagatatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgattgaggccagtagcctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggttttccatgcaaatcctgggacggtaactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaagaagcaatctcactcattgagggaatcaaccacacgcatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacttccatcttcaactcaatgatcaataacattattatcagggcactgctcatcaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctaccccttcccaattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgactcctgctgacaaatctccttgctttaatgaggtcaattggggtaatgcgacctttctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccacgagtccatccgatggaccaaagacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggcaagcaagaatatgaaaagtttgtgagcacaattaggtctgtcccagtaggaagagcattagctattccaaattatgaaaatcttagacgcaattggctcgagctatttt-----agaggttacac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT008671.1_Enterovirus_A71_strain_109/EV71/Wenzhou/CHN/2014_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccatttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaataaactgc-tcgcgcggttgaaggaaaaaacgttcgttatccggccaactacttcgggaaacc-tattaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtccccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aaaagtctactgagctatttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacatgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------aaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----tacctg----tttatt-ggttttgtgccat-----taacctt--------------gaattctgtgacc-acccttaattacatcttgactcttaactcagctaaa-----catgggttcgcaagtgtctacacagcgctccggctctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggacccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcagttaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgccacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtattggaagttcccggacgtgttaacagaaactggggtttttggccaaaatgcacaattccactacctctaccgatcagggttctgcattcacgtgcagtgcaatgccagcaaattccaccaaggagcactcctagtcgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcaaactcaacccggcgccgacggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtaccatacatcaatgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccagggagcgacgccagtaatccctataactatcacactggccccaatgtgctctgaattcgcaggccttagacaggcagtcacgcaagggttccccaccgagttaaagcctggcacaaatcaatttttaaccaccgatgacggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccatcctggaggttaacaa----------tgtgtccacgaacgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttactttcatgtttactggatccttcatggccaccggtaagatgctcatagcctatacaccaccgggaggtcctctacccaaggaccgggcaaccgccatgttgggcacgcacgtcatctgggattttggactgcaatcgtctgttacccttgtaataccatggattagtaacactcattatagagcacatgctcgagatggagtgtttgattactataccacagggttagtcagtatatggtatcagacaaattacgtggttccgatcggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaactttactatgaaattgtgcaaggatgctagtgatatcttgcagacgggcactattcagggagatagg--------gtggcggatgtaattg---aaagctccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggacacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacgctgtgtccttaactcgcacagcacagctgaaaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttaagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcagatgcgtagaaaggtagagctgttcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattactccaatatatgtttgtaccacctggagcccctaagccagattctagggaatctcttgcatggcaaaccgccactaatccctcagtttttgtcaagctgtcagaccctcctgcgcaagtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacatttggagaacacaaacaggagaaggatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtgggaacctccaagtctaagtaccccttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctgttcaaagccaacccgaattatgctggcaa----ctccattaagccaactggtgctagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtagttaaccgacacctagctactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccagggctgtgacacgattgcccgttgcaattgccagacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacccggtgactgtggtggtatccttagatgccaacatggtgtcatcggcatagtgtccactggtggtaatgggctcgttggttttgccgacgtcagagatctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggggatgcttttggaacaggtttcactgacgcggtctcgagggaggttgaagctctcaagagctatcttatagggtccgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcaggagtgactacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgccgccaaggggttagagtgggtctccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ttgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagctca---------cttctgtcgcaagttccaaccactatacgccacggaagctagaagagtctacaccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattatcaggggctcaccaggcactgggaaatctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacgcggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctctattctgccagatggtatccaccgtagatttcattccaccaatggcttctctcgaagagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttttacatggactgtgacattgaagtgacagactcgtacaaaacagatctaggtagattggatgcagggcgagctgctaaactgtgctccgaaaataacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaagatc---agtcttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatatagaacggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgctcaagaaacccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaagggcatttcaccatgctgggcgttagggaccgcttagcagtcctcccacgccactcacaacctggcaaaactatttggattgagcacaaacttgtgaatgtccttgacgcagttgaactggtggatgagcaaggagttaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggaacacatgccgtcaatgttcgtcccggtaggtgatgttgtgcagtatggctttttgaatctcagtggtaagcctactcatcgcacgatgatgtataactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggcggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacagggagaaatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtacgtgggaaacacactacatgagcctgacgagtacatcaaagaagcagctcttcattatgcaaatcaattaaagcaactagaaattgatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagcgcaggttacccctatagtgccctggggataaagaagagagatattttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagcttaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggttttccatgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagataggatatagtgaagaagcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacttccatcttcaactcaatgatcaataacattattatcagggcactgctcatcaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctaccccttcccaattgattgcttggaattagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgacctttctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtccatccgatggaccaaagacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggcaagcaagaatatgaaaagtttgtgagcacaattaggtctgtcccagtaggaagagcattagctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttaaac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT428646.1_Enterovirus_A71_isolate_EV71/SZ12/CHN/2014_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcctac-t-gggcgcaagcactctggtacttcggtacctttgtgcgcct-g-ttttata------cccc---c---tccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttacccggccaactactttggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacgcgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaga-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gacttctgtgacc-acccttaattatatcttggcccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaattcagccactg-agggttctaccataaactacaccaccatcaattactataaagactcctatgccgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcgtgtgggtacagtgatcgagtggcgcagctaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattagacactaaattatgggagaaat------------------catccaaggggtggtactggaagttcccggatgtgttaacagagactggggtttttgggcaaaatgcacaattccactacctctaccgatcaggattctgcatccacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagttgctgtcttaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccatcccccttacaagcagactcaacctggcgccgatggttttgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgactctgccttgaaccattgcaactttggcctgttagtagtgcctattagcccactggactacgaccaaggagcgacgccagtaatccctataactatcacactggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccctaccgagctaaaacctggcacgaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcattcacatacctggtgaagttaggaacttgctagagttgtgccaggtggagactattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgtttcccagtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccccgggcgaaatggaccgtggcaatccaccttactgggtcagttatgcgggtactacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggtcctttacccaaggaccgggcaaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgtcacccttgtaataccgtggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagttagtatatggtatcagacaaattatgtggttccaatcggtgcacccaacacagcctacataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcatgctctaccagca--------cccacaggccagaacacacaggtgagcagtcaccggctggatacaggcaaggttccagcactccaagctgccgaaattggagcgtcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccacccttgatagcttctttagtagggcgggactagttggagagatagatctccctcttgagggtacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagaactattcacctacatgcgctttgatgcagaattcacttttgttgcgtgcacacccactggggaagttgtcccacaattgctccaatatatgtttgtgccacccggagcccctaagccagattctagggaatcccttgcgtggcaaaccgccactaatccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcagtggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcggtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacttatttaaggccaacccaaattatgctggtaa----taccattaaaccaactggtgccagtcgcacagcaat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagatagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacaattgcccgttgtgattgccagacaggggtgtattactgtaactctatgagaaaacactacccagttagtttctcgaaacccagcctaatctatgtagatgctagcgagtattacccagccaggtatcaatcacatcttatgctcgcacagggccactcagagcctggtgattgtggtggcatccttagatgccaacatggcgtcatcggcatagtgtctactggtggtaatgggcttgttggctttgccgacgtcagagaccttttgtggctagacgaagaagctatggagcaaggcgtgtccgactacatcaag-ggtcttggagatgctttcggaacaggcttcactgacgcagtctcaagggaggttgaggctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttaaaaaatcttattaaactaatctctgcactagtgattgtgatcaggagtgattacgatatggttaccctcactgcaaccttagcgctgataggctgtcatggcagtccttgggcttggatcaaggctaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcaaatctcaaacttggaacaatctgctgcttcacaagaggaccttgaagttatgtttggaaatgtgtcgtatctagctca---------cttctgtcgtaaattccaaccgctatatgccacggaagctaaaagagtctatgccctggagaagagaatgaacaactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggttcaccaggcactgggaagtctctagccactggtatcattgcgcgagcaattgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcactttgatggttacaagcaacaggtagttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcattgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggattgtgacattgaagtgacagactcatacaaaacagacctaggtagactggatgcaggacgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggacacagtggtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggcccacccaagtttagaccaatcaggatt---agtcttgaagaaaaaccagccccagacgctataagcgacctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcctaccaatgtagagcggcatcttaatagagcggtgctcgttgtgcaatccatcgccacagtagtcgcagttatctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcatattctggtgctcccaagcaagtgcttaaaaaacccactctacgcacagcaatagtgcagggcccgagtcttgactttgctctctccctgctgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcggtcctcccgcgccactcacaacctggcaaaactatttggattgagcataaactcgtgaacgtccttgatgcagttgaactggtagatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaatgaaaagtttagggatatcaccaaattcatcccagaaaacatcagcactgctagcgacgccaccctagtgattaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtacggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacgtctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaagaagttactttgctagtgaacaaggagagattcagtgggtcaagcccaataaagaaactgggagactcaacatcaatggaccaacccgtaccaagttagaacctagtgtattccatgacattttcgagggaagtaaagaaccagctgtcttgcacggtaaagacccccgacttgaggtagatttcgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcagttaaagcaactagaaattaatacctcccaaatgagcatggaggaggcctgctacggtactgagaatcttgaagctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagcaaaatgaagttctacatggacaagtatggccttgatcttccttactccacttatgtcaaggacgaactgcgctcgattgataaaatcaagaaagggaagtcccgcctgattgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaatcctgacacattctggagtaagctgccaattttgctccctggttcactctttgcctttgattactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggaggtaggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgcaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaataatattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaatatggtcgcttatggagatgacgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgactatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccacgagtctattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcacaatggtaaacaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaaatt-g-actg--------gtgggggtaaatttgt-ta-taaca-g-a-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT008669.1_Enterovirus_A71_strain_4/EV71/Wenzhou/CHN/2014_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gacttctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcgtgtgggtacagtgatcgagtggcgcagttaactattggcaactccaccatcactacgcaagaagcagctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttctacacattagacactaaattatgggagaaat------------------cgtccaaggggtggtactggaagttcccggatgtgttgactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcggggttctgcatccacgtgcagtgcaatgccagtaaatttcaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggtggtacagggacgg------aagacacccaccccccttacaagcagactcaacccggcgccgatggtttcgagttgcaacacccgtacgtgcttgatgctggcatcccgatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgccacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagtagtacctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgctctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaagcctggcacaaatcaattcttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagactattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgtttcccagtctcagcacaagcag------gtaaaggtgagctgtgtgcagtgtttagagccgaccccgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacactcaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctacacaccaccaggaggtcctctgcccaaggaccgggcaaccgccatgttgggcacacacgtcatctgggatttcgggctgcaatcctctgttacccttgtaataccatggattagcaatactcattatagagcacatgcccgagacggagtgtttgactactacaccacagggttagttagtatatggtatcagacaaattacgtggttccaattggtgcgcccaacacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcatgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcggctagatacaggcaaggttccagcactccaagctgccgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagaactattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtgccacccggagcccctaagccagattctagggaatcccttgcatggcaaaccgccactaatccttcagtttttgtcaagttatcagaccctcctgcgcaggtctcagtgccgttcatgtcacctgcgagtgcttatcagtggttttatgacggatatcccacatttggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttttcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgccccatgcgtaaccagaactacctattcaaggccaacccaaattatgctggtaa----caccattaaaccaactggtgccagtcgcacagcaat---taccac---------------------------------------tctcggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaatcgacatcttgccactcacaatgattgggcaaatcttgtatgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccagggttgtgacacaatagcccgttgcgattgccaaacaggggtgtactactgtaactctatgagaaaacactacccagttagtttttcgaaacccagcctaatctatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagagcctggtgactgtggtggcatccttagatgccaacatggcgtcgtcggcatagtgtctactggtggtaatgggctcgttggctttgccgacgtcagagacctcttgtggctagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggggatgctttcggaacaggcttcactgatgcggtctcaagggaggtcgaagctctcaaaagctatcttatagggtctgaaggagcagttgagaaaattttaaagaaccttattaaactaatctctgcactagtgattgtgatcaggagcgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaagacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaacaacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcttcacaagaggaccttgaagtcatgtttggaaatgtgtcgtatctggctca---------cttctgtcgcaagtttcaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaacaactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgcgcgagcaattgctgataagtaccactccagcgtgtactcactcccgccagacccagatcattttgacggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatctaccgtagacttcattcctccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgttatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgtaggttctacatggactgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaattttaaacggtgcagtccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcaggtacagcgtggacacagtggtttcagaacttattagggaatacagcaataggtctgccattggcaacacgatcgaggctcttttccaaggcccacccaagtttagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgacctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcatcttaatagagcggtgctcgttgtgcaatccatcgccacagtagtcgcagttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaaacccactctacgcacagcaacagtgcagggcccgagccttgactttgctctctccctgctgagaaggaacatcaggcaagtccaaacagatcaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccgcgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagttaacctggaattaaccctcatcactcttgacaccaatgaaaaatttagggatatcaccaaattcatcccagaaaatatcagcactgctagtgatgccaccctagtgattaacacggagcacatgccatcaatgtttgtcccggtgggtgatgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcccaccagagcaggacagtgtggaggagtggtgacatctgttgggaaggtcgtcggcattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagattcagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagttagaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcctgcacagtaaagacccccggcttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcggctcttcattatgcaaatcaattaaagcaactggaaattaatacttctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctatcgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggacgagctgcgctcaattgataaaatcaagaaagggaagtcccgcctgattgaggccagtagtctaaatgattcagtgtacctcagaatggcttttggacatttgtatgaggctttccatgcaaatcctgggacgataactggatcagctgtggggtgtaatcctgacacattctggagcaagttgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagtcttagccctgtctggttcagagcattagaattggttcttagggaggtaggatatagtgaagaggcaatctcactcattgagggaatcaatcacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgattaataacattattatcagagcattgctcataaaaacatttaagggcattgatttggatgaactcaatatggtcgcttatggagatgacgtgctcgctagttatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtttaactatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggcttcttgcccgatgaacaatttccatttttgattcaccccactatgccaatgagagagatccatgagtctattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289424.1_Enterovirus_A71_isolate_EV71/P267/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggccaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcgcacaagtca-gcggg-tagtttgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gacttctgtgacc-acccttaattatatcttgacccttaacacagctaga-----catgggttcacaagtgtcttcacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccatcaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaaacaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcagttaactattggcaattccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccagatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggacgtgttaacagaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcacggttctgcattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgttctaccagaatatgtcattgggacagtagcaggcggtacaggcacgg------aagatacccaccccccttacaagcagactcaacccggcgtcgatggtttcgagtcgcaacccccgtacgtgcttgatgctggcatcccaatctcacagttaacagtatgtccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaattttggcctgttagtagtgcctatcagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagttacgcaagggttccccactgagctaaagcctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaatttgctagagttatgtcaggtggagaccattttggaggtcaacaa----------tgtgcccacgaatgccactagttta------atggagagactgcgcttcccagtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtattacacccaatggtcaggatcattggaagttactttcatgtttactggatccttcatggctacaggtaagatgctcatagcctatacaccaccaggaggtcctctacccaaggaccgggcaaccgccatgttgggcacgcacgttatctgggatttcgggctgcaatcgtctgttacccttgtaataccatggattagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagttagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctacataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactagatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgtccttaactcgcacagtacagctgagaccactcttgatagctttttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggctatgccaactgggacatagatataacatgttatgcgcaaatgcgtagaaaggtagaactattcacctacatgcgctttgatgcagagttcacctttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatacatgtttgtgccacccggagcccccaagccagattctaggaaatctcttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctcctgcgcaggtttcagtaccattcatgtcacctgcgagtgcttatcagtggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggtacgttctcagtgcggactgtggggacttccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactacctattcaaagccaacccaaattatgctggcaa----caccattaagccaactggcgccagtcgcacagcgat---taccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggctgtgacacaattgcccgttgcgactgtcagacaggggtgtactactgtaactctatgagaaaacattacccagttagtttttcgaaacccagcctaatttatgtagatgctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagagcctggtgactgtggtggcatccttagatgccagcatggcgtcatcggcatagtgtctactggtggtaatgggctcgttggctttgccgacgtcagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggccttggagatgcttttggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttaaaaaatcttattaaactaatctctgcgttagtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggctaaaacagcctccattttaggtatccccatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaattgtaccagcagccagggagaaggttgaatttctaaacaacttgaaacagctgccg-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------tttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacatcgaattgaacctgtatgtctcatcattaggggctctccaggcactgggaagtctttagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtatactcgctcccaccagacccggatcattttgatggttacaagcaacaggtggttacagtaatggatgatttgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtggacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgactctgacgctatccgccgcaggttctacatggactgtgacattgaagtgactgactcatacaaaacagatctaggtagactggatgcagggcgcgtcgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggacacagtggtttcagaacttattagggaatacaataatagatccgctattggtaacacaatcgaggctcttttccaaggtccacccaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagatgctattagtgacctccttgctagtatagacagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagttcccaccaatgtagagcggcatcttaatagagcggtgctcgttatgcaatccattgccacggtagtggcagttgtttcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtgcttaagaagcccgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccgcgccactcacaacctggcaaaactatttggattgagcacaaactcgtgaatgtccttgatgcagttgaactagtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggacatcaccaaattcattccagaaaatatcagcactgctagtgatgccaccctagtgatcaatacagagcacatgccatcaatgtttgtcccagtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgtaccatgatgtataactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggcattcacattggtggcaatggcagacaaggtttttgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagttagaacctagtgtattccatgacatcttcgagggaagtaaagaaccagctgtcttgcacagcaaagacccccggcttgaggtagatttcgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttttacatggacaagtatggtctcgaccttccttactccacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcggctgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccccggttcactctttgcctttgactactcaggttatgatgccagcctcagccctgtctggttcagagcattagaattggttcttagggaggtaggatatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggctgctcaggtacatccatcttcaattcaatgatcaacaacattattatcagggcactgctcataaaaacatttaagggcattgatttggatgaactcaatatggtcgcttatggagacgatgtgcttgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctgactatgactcctgctgataaatctccttgctttaatgaggtcaattggggcaatgcgaccttcctcaaaaggggcttcttgcccgatgaacagtttccatttttgattcaccccactatgccaatgagagagatccatgagtctattcgatggaccaaggatgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataacggtaagcaagaatatgagaagtttgtgagtacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggttatac-------------------------atgc---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU936132.1_Enterovirus_A71_strain_SHAPHC5468/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcgagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---c---ctcc-c------aa-c-gaaacttagaag--------------cagca-aaccac-gatcaa-tagtaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacatcatgaaagttgcagagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagctagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----tgacttt--------------gaattctgtgacc-acccttaattatattttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcatgagaactcaaactcagccactg-agggttctaccataaattataccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccgctgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaggcggctaacatcatagtcggttatggtgagtggccttcctactgttcagattctgacgctacagcagtggataaaccaacgcgcccggatgtctcagtgaacaggttttacacattggatactaaattgtgggagaaat------------------catccaagggatggtactggaagtttccagatgtgttgactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcttaccagagtatgtcattgggacagtagcaggcggcacagggacgg------aagatacccaccccccttacaagcaaactcaacccggtgccgatggcttcgagttgcaacacccatacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccgcaccaatggatcaatttgaggaccaacaattgtgctacaataatagtgccgtacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccactagactacgaccagggagcgactccagtaatccctataactattacactggccccaatgtgttctgaattcgcaggtctcaggcaggcagtcacgcaagggttccccactgagctaaaacctggcacgaaccaatttttgaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgttagagctatgtcaggtggagaccattctagaggttaacaa----------tgtgcctacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaagggtgagctgtgcgcggtgttcagagccgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcagggtcattggaagtcaccttcatgttcactggatccttcatggccactggcaagatgctcatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcgcccaacacagcctatataatagcattagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtagcagatgtaattg---aaagttccat--------------------------aggggatagcgtgagcagggccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgaaagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcggggttagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgccactaacccctcggtttttgtcaagttgtcagaccccccagcgcaggtttcagtgccattcatgtcacctgcaagtgcttatcaatggttttatgacggatatcctacattcggagaacacaaacaggagaaagatctcgaatacggggcatgtcccaataacatgatgggtacgttttcagtgcggactgtgggaacctccaagtccaagtaccctttagtggttaggatctacatgagaatgaagcacgtcagggcgtggatacctcgtccgatgcgtaaccaaaattacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtccggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccactcacaatgattgggcgaaccttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgatacgattgctcgttgcgattgtcagacgggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtactacccagccaggtaccaatcacatctcatgcttgcacagggtcactcagagcctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggcatagtgtctaccggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgcttttggtacaggcttcactgacgcagtctcaagggaggttgaagctcttaagaactatcttatagggtctgaaggagcagttgagaagatcttaaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttaccctcactgcaaccttagcgttgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgttcaaaagcagagtgcttcttggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacagtctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacagaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtgtgtcttattattaggggctcaccaggcactgggaagtccctagctactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctgccaccagacccggatcatttcgacggttataagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttcctttacttctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgacattgaagtgacagactcgtacaagacagatttaggtagactggatgcggggcgagccgctaaactgtgctctgaaaacaacactgcaaacttcaaacgttgcagcccattagtatgtgggaaagctatccaactcagagatagaaagtccaaagtcagatatagtgtggacacggtggtttcagaactcatcagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaaaaccagccccggacgctattagcgatctcctagctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtggagcggcatcttaatagagcggtgcttatcatgcaatccatcgccacagtggtggcggttgtctcattggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagagacctgctcttcgcacagcaacagtgcagggcccgagccttgatttcgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttggcagtcctcccacgccattcacaaccaggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaagtttagggatattaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggaacacatgccatcaatgtttgttccagtgggtgacgttgtgcagtatggcttcttgaacctcagtggtaaacctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatcttcgagggaaataaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggctctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacattaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacttctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggccttgatctgccttactctacttatgtcaaggatgagctgcgctcgattgataaaatcaagaaagggaagtcccgtctgatcgaggccagtagtttgaatgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattttggagcaagctgccgattttgctccctggctcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggtttagagcattagaactggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacgcaccatgtgtatcgcaataagacctattgtgtgcttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgattaacaacattatcatcagagcattactcataaaaacatttaagggcattgacttagatgagctcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcctagaattagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatccccttgctttaacgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagtgagatccatgagtccattcgatggaccaaggatgcacgaaacactcaagatcacgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtgggaagagcgttggccatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------atac---------------ctcaaccc-caccagaa----gtctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU936125.1_Enterovirus_A71_strain_SHAPHC5307/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgctagcactctggtaccccggtacctttgtgcgcct-g-ttttata------cccc---c---ccct-t------ag-t-gaaacttagaag--------------cagta-aaccac-gatcaa-tagcaggcatagcactccagctatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttacccggccaactacttcgggaaacc-tagtagcaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttgtattggctgcttatggtgacaattaag-------gaattgttaccatatagctattggactggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccct-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaggattcctatgctgctacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcgtgtggatacagcgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattccgacgctacagcagtggacaaaccaacgcgcccggatgtttcagtgaacaggttttacacattggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttggacaaaacgcacaattccactacctctaccgatcagggttctgtatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcttagtcgctgtcctaccagagtatgttattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagacccaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattccgccttgaaccattgcaactttggtctgttagttgtgcctattagcccactagactacgatcaaggagcgacgccagtaatccctataaccattacattagccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggtgtctcggcacctattctaccgaacttccaccccaccccatgtatccacatacctggtgaagttaggaacttgctggagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtttcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagctgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcacctttatgttcactggatccttcatggctaccggcaagatgcttatagcctatacaccaccaggaggtcctctacccaaggaccgggcgaccgccatgttaggcactcacgtcatctgggactttgggctgcaatcgtctgttacccttgtaataccatggatcagtaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtagtcccaattggtgcacccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgtaaggatgccagtgatatcctgcagacgggcactatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggccaaaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgagattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgaaaccactcttgatagtttcttcagcagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagacataacaggttacgcgcaaatgcgtaggaaggtagagctattcacctacatgcgctttgatgcagaattcacttttgttgcgtgcacacccaccggggaagttgtcccacagttgctccaatatatgtttgtgccacctggagcccctaagccagattctagggagtccctcgcatggcaaaccgccaccaacccgtcggtttttatcaagctgtcagaccccccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttctatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacattctcagtgcggactgtggggacctccaagtccaagtatccattagtggttaggatttacatgagaatgaagcacgtcagagcgtggatacctcgcccgatgcgcaaccagaactacttgttcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacatcgat---taccac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccggcaccttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtatcatccaccactgcccaaggttgtgacacgatcgcccgttgcgattgccagacaggggtgtattactgtaactcgatgagaaaacactacccagtcagcttttcaaaacccagtctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacacctcatgctcgcgcagggtcattcagaacctggtgattgcggtggtatccttagatgccaacatggtgtcgttggcatagtctctactggtggcaatgggctcgttggttttgcagatgtcagggaccttttgtggttagatgaagaagccatggaacagggcgtgtccgactacatcaag-ggtctcggagacgcttttggaacgggcttcactgacgcagtctcaagggaggttgaagctcttaagaactaccttattgggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagcgattatgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaggccaaaacagcctccatcttaggtattcctatcgctcaaaaacagagcgcctcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccggcagccagggaaaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcttcacaagaggaccttgaagccatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccagccgctatacgccacggaagccaaaagagtctatgccctggagaagagaatgaacaattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccggatcattttgacggttacaagcaacaggtggttacggtgatggatgatctgtgtcaaaaccccgatggtaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcctctctcgaggagaagggagtttccttcacctccaagtttgtcatcgcatccactaatgccagtaatatcatagtgccaacagtgtctgattctgacgctattcgccgcaggttctacatggactgtgatattgaggtgacagactcgtataaaacagatctaggcagattggatgcagggcgagccgctaaactgtgttcagaaaacaacactgcaaatttcaaacgttgcagtccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatatagtgtggatacagtggtttcggaacttattagggaatacagcaataggtccgccattggtaacacgattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agcctcgaagaaaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcccgaagttcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatctatcgccacggtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgttcttcgcacagcaacagtgcagggcccgagccttgactttgctctctctctactgagaaggaacatcaggcaagtccaaacagaccaagggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaaccatttggatagagcacaaacttgtgaacgttcttgatgcagttgaactggtggatgagcaaggagtcaacctggaattgaccctcatcactcttgacaccaacgaaaagtttagggacgttaccaaattcatcccagaaaatattagcactgctagcgatgccaccctagtgatcaacacggaacacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggcaagcctacccatcgcaccatgatgtacaattttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaaattgtcggcattcacatcggtggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcactaagttagaacccagtgtattccatgacatttttgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttttctaagtatgtgggaaacacactacatgagcctgatgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaagaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggctacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtctcgatcttccttactctacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaatgattcagtgtacctcagaatggcttttggacatttgtatgaagttttccacgcaaatcctgggacgataactggatcggccgtggggtgcaaccctgatacattctggagcaagctgccaattttgctccctggttcactctttgccttcgactattcaggttatgatgccagccttagtcctgtctggttcagggcattagaattggttcttagagagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccttcaggctgttcagggacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttacggagatgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggtaaggagtatggtctgaccatgacccctgctgataaatctccttgctttaatgaagtcaattggggtaatgcaacctttctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggatgcacgaagcactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggcaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaaccttagacgcaattggctcgaattatttt-----agaggctacgc-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX752783.1_Enterovirus_A71_isolate_Jinan/SD/CHN/2015_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgctagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gtaacttagaag--------------cggta-agccac-gatcaa-tagcaggcatgacgctccagtcatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttacccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagggcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtacctt-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggctcgcaagtatctacacagcgctccggttctcacgaaaactcaaattcagccactg-agggttctaccataaactacaccaccattaattactacaaggattcctatgctgccacagcaggcaaacagagtctcaaacaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccctcctactgctcagattctgatgctacagcagtggacaaaccaacgcgcccggatgtttcagtgaacaggttttacacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcaggattctgtattcacgtgcagtgcaacgccagtaaattccaccaaggagcactcttagtcgctgttctaccagagtatgtcattgggacagtagcaggcggcacagggacag------aagatacccaccccccttacaagcagacccaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagctaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacgataatagtgccatacattaacgcactgccttttgattctgccttgaaccattgcaattttggcttgttagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataaccatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacacaagggttccccaccgagctaaagcctggcacaaatcaatttttaaccactgatgatggtgtctcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttgtgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagctgatcctgggcgaaatggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgcttatagcctatacaccgccgggaggtcccctacccaaggaccgagcgaccgctatgttaggcacgcacgtcatctgggactttgggctgcaatcatccgttaccctcgtaataccatggatcagtaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtaccagacaaattacgtggtcccaattggtgcacccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggacgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgccctaccagca--------cccacaggccaaaacacgcaggtgagcagtcatcgactggatacaggcaaggttccagcgctccaagccgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttctttagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgctaactgggacatagacataacaggttacgcgcaaatgcgtaggaaggtagagctattcacctacatgcgctttgatgcagagttcacttttgttgcatgcacacccaccggggaggttgtcccacaattgctccaatatatgtttgtaccacctggagcccctaagccagattctagggaatcccttgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagacccaccagcgcaagtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcctaacaacatgatgggcacattctcagtgcggactgtggggacttccaagtccaagtatccattagtggttaggatttacatgagaatgaagcatgtcagagcgtggatacctcgcccgatgcgcaaccagaactacctgttcaaagccaacccaaattatgctggcaa----ctccatcaagccaactggcaccagtcgcacatcgat---caccac---------------------------------------ccttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaacttcagagtagtcaaccggcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgtgacttgctcgtatcatccaccactgcccaaggttgcgacacgattgcccgttgcgactgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacacctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgtcaacatggagtcgttggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagggatcttttgtggttagatgaggaagctatggaacaaggtgtgtctgattacatcaag-ggtctcggagacgcttttggaacaggcttcactgacgcagtttcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaattaatctctgcactggtgatagtgatcagaagtgattatgacatggttactctcactgcgaccttagcgttgataggttgtcatggcagtccttgggcttggatcaaggctaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcctcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagtaaatttattgattggctcaaagagaaaatagtaccggcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcttcgcaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaaattccaaccactatacgccacggaagctaaaagagtatatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacccgtatgtctcattattagaggctcaccaggcactgggaagtctctagccactggtattattgcccgagcaatcgctgacaagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaggtggttactgtgatggatgacctgtgtcaaaaccccgatggtaaggatatgtctttattctgccaaatggtatccaccgtagatttcattccaccaatggcctctcttgaggaaaagggagtttccttcacctccaagttcgtcatcgcatccactaatgccagtaatatcatagtgccaacagtgtccgattctgacgctattcgccgcaggttctacatggactgtgacattgaggtgacagactcgtacaaaacagatctaggtagattggatgcagggcgagccgctaaactgtgttcagaaaacaacactgcaaatttcaaacgttgcagtccattagtgtgtgggaaagccatccaacttagagatagaaaatctaaagtcagatacagtgtggacacagtggtttcggaacttattagagaatacagcaatagatccgccattggcaacacgattgaggctcttttccaaggtccacccaagttcaggccaattaggatc---agcctcgaagaaaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatctatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaggaaacctgctcttcgcacagcaacagtacagggcccgagtcttgactttgctctctctctactgagaaggaacattaggcaagtccaaacagaccaagggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaaaccatttggatagagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaatctggaattgaccctcatcacccttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatatcagcactgctagcgatgccaccctagtgatcaacacggagcacatgccatcgatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagcggtaagcctacccatcgcaccatgatgtataattttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaagttgtcggtattcacatcggtggtaatggcagacaaggcttttgtgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccaatgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgacatttttgagggagataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttttctaagtatgtgggaaacacactacatgagcctgatgagtacatcagagaagcagctcttcattacgcaaaccaattaaagcaactagagattaatacctctcaaatgagcatggaagaggcctgttacggtactgagaatcttgaggctattgatcttcacactagtgcaggctacccttatagtgccctggggataaagaaaagagacatcttagaccctattaccagggacgtgagtaaaatgaagttctacatggacaagtatggcctcgatcttccttactctacttatgtcaaggatgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggctagtagtctaaatgattcagtgtacctcagaatgactttcgggcatttgtatgaggctttccacgcaaatcctggaacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactattcaggttatgatgccagcctcagccctgtctggttcagagcattagagttggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccttcaggctgctcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggttgcttacggagacgatgtgcttgctagttatcccttcccaattgattgcttggagctagcaaagactggtaaggagtatgggctgaccatgacccctgctgataaatctccttgctttaatgaagtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagagagatccatgagtccattcgatggaccaaggatgcacgaaacactcaagatcatgtgcggtccttgtgccttttagcatggcataatggtaagcaagaatatgagaggtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaaccttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-agtagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC109780.1_Human_enterovirus_71_strain_202/Jingdezhen/China/HFMD_Severe/2011_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgctagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------gg-g-gaaacttagaag--------------cagta-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagacggc-tcacgcggttgaaggaaaaaacgttcgttacccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggaaagcttcgttcagca--ctt-cccca---gggtaaatcaggtcgatgagtcaccgca-ttccccacgggcgaccggggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccagggggggctctaatacggacatggtgtg-aaaagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtacctt-----taacctt--------------gaattctgtgatc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtccacacagcgctccggttctcacgaaaactcaaattcagccactg-agggttctaccataaactacaccaccattaattactacaaagattcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgagatggcagcgccattgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggacgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactatctctaccgatcagggttctgtatccacgtgcagtgcaatgccagtaaattccaccaaggggcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccctacaagcagacccaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacggtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcacttccttttgattctgccttgaaccattgcaactttggtctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgacggcgtctcagcacctattctaccaaacttccaccccaccccatgtatccacatacctggtgaggttagaaatttgctagagttatgccaagtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagccta------atagagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgaactgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgcttatagcctatacaccgccaggaggtcctctacccaaggaccgggcgaccgccatgttaggcacgcacgtcatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaatactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccgatcggtgcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagacagcgtgagcaggtgcctcactcacgctctaccagca--------cccacaggccaaaacacacaggtgagcagtcatcaactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagtagggcggggttagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgccaactgggacatagacataacaggttacgcgcagatgcgaaggaaggtagagctattcacctacatgcgctttgatgcagagtttacttttgtagcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcatggcaaactgcgaccaacccctcagtttttgtcaagctgtcggaccctccagcgcaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgtcccaataacatgatgggcacattctcagtgcggactgtggggacctccaagtccaagtacccattagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctgttcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgctagtcgcacatcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccggcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttactcgtgtcatccaccactgcccaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaagacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacaaggtcactcagaacctggtgattgcggtggtatccttagatgccagcatggcgtcgttggcatagtgtctactggtggtaatgggctcgttggctttgcagacgtcagagaccttttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaagcggtctcggagacgcttttgg-acaggcttcactgacgcagtctcaagggaggttgaggctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttaaaaaatcttattaaactaatctctgcactggtgatagtgatcagaagtgattatgacatggttaccctcactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcctccatcttaggtatccctatcgctcaaaaacagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttatagattggcttaaggagaaaatagtgccggcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgctagagaaccagatctcaaacttggaacaatctgctgcttcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgaaagttccaaccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaacaactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttacaagcaacaagtggtcacagtgatggatgatctgtgtcaaaaccccgatggtaaggatatgtctttattctgccaaatggtatccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtgccaacagtgtctgactctgacgctattcgccgcaggttctacatggactgtgacattgaggtgacagactcgtacaaaacagatctaggtagattagatgcagggcgagccgctaaattgtgttcagaaaacaacactgcaaatttcaaacgttgcagtccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcggaacttattagggaatacagcaataggtccgccattggtaacacaattgaggctcttttccagggtccacctaagttcaggccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgt-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaacagagcggtgcttatcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtacgtcatctacaaactctttgcagggtttcagggtgcgtattccggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacagaccaagggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggtaaaaccatttggattgagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcacccttgacaccaacgaaaagtttagggatatcaccaaattcatcccagaaaatatcagcactgctagcgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggcaagcctacccatcgcaccatgatgtacaattttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaaattagaacctagtgtattccatgacatctttgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttttctaagtatgtgggaaacacactgcatgagcctgacgagtacatcaaagaggcagctcttcattacgcaaaccaattaaagcaactagaaattaatacctctcagatgagcatggaagaggcctgctacggtactgcgaaccttgaggctattgatctacacactagtgcaggttacccctacagtgccctggggataaagaaaagagacatcttagatcctaccaccagggacgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactctacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaaggaaagtcccgcctgatcgaagccagtagtctaaatgattcagtgtacctcagaatggctttcggacatttatatgaggctttccacgcaaatcctgggactataactggatcggccgtgggatgtaaccctgacacattctggagcaaactgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatggtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggttgttcaggaacgtccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggagctagcaaagactggtaaggagtatggtctgaccatgacccctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccatccgatggaccaaggacgcacgaaacacacaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT428647.1_Enterovirus_A71_isolate_EV71/SZ25/CHN/2014_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acgtattcaca-actcttcc-g-cgacgctagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cggta-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgtccgttacccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-tccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtygtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttgtattggctgcttatggtgacaattaag-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaataatt-----taccta----tttatt-ggttttgtaccct-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagccaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccaccg-agggttctaccataaactacactaccattaattattacaaggattcctatgccgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaaccctgttaaagatatcttcactgaaatggcagcaccattgaagtccccatccgccgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaattccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggacaaaccaacgcgcccggatgtctcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagatgtgttaactgaaactggggttttcgggcaaaatgcacaattccactacctctaccgatcagggttctgtatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcttagtcgctgtcctaccagagtatgtcattgggacagtggctggtggtacagggacgg------aagatactcaccccccttacaagcagacccaacccggcgctgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccaatggattaatttgaggaccaacaattgtgctacaataatagtaccatacattaacgcactaccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggggcaacgccagtaatccctataaccatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagttacgcaagggttccccaccgagttaaaacctggcacaaatcaatttttaaccaccgatgatggcgtctcagcacctattctgccaaacttccaccccactccatgtatccacatacctggtgaagttaggaacctgctagagttatgccaggtggaaaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcgcaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaacggaccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttaccggatccttcatggctaccggcaagatgcttatagcctatacaccgccaggaggtcctctacccaaggaccgggcgactgccatgttaggcacgcacgtcatttgggactttgggctgcaatcgtctgttaccctcgtaataccatggattagtaacactcattatagagcacacgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggtccctattggtgcacccaatacagcctatataatagcactagcagcagcccaaaagaactttactatgaaattgtgcaaggatgctagcgatatcctacagacgggcaccattcagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagacagcgtgagtagagccctcactcacgctctaccagca--------cccacaggccaaaacacacaggtgagcagtcatcgactggatacaggcagggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgacagcttcttcagtagggcgggattagttggagagatagatctccctcttgagggcacaac-taacccaaatggttatgctaactgggacatagatataacaggttacgcacaaatgcgtaggaaggtagagctattcacctacatgcgctttgatgcagagttcactttcgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattctagggaatcccttgcgtggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtgccattcatgtcacctgcgagcgcctatcaatggttttatgacggatatcccacattcggagaacacaagcaagagaaagatcttgaatacggagcatgtcctaataacatgatgggcacattctcagtgcggactgtggggacctccaagtccaaatacccattagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccagaactacctgttcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgacagtcgcacatcgat---catcac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggctatttatgtgggcaactttagagtggtcaaccgacatcttgccacgcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatctaccactgcccaaggttgtgacacaatcgcccgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgtcaacatggcgtcgttggcatagtgtccactggtggcaatgggctcgttggctttgcagacgtcagagaccttttgtggttagatgaagaagctatggagcagggcgtgtctgactacatcaag-ggtctcggtgacgctttcggaacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcggttgagaaaattttaaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattatgacatggttaccctcactgcaaccttagcgctgataggatgtcatggcagtccttgggcctggatcaaggccaaaacagcctccatcttaggtatccctattgctcaaaagcagagcgcctcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaagagaagatagtaccggcagccagggagaaggttgaattcctaaataacttgaaacagctacca-ctgctagagaaccagatctcaaacttggaacaatctgctgcttcacaagaggaccttgaagtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgttgtacgccacggaagctaaaagagtctacgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcattttgacggttataagcaacaggtggttacagtgatggatgatctgtgtcaaaaccccgatggaaaggacatgtctttattctgtcaaatggtgtccaccgtagacttcattccaccaatggcttctctcgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaacgccagtaatatcatagtgccaacagtgtctgattctgacgctattcgccgcaggttctacatggattgtgacattgaggtaacagactcgtacaaaacagatctaggtagattggatgcagggcgagccgctaaactgtgttcagaaaacaacactgcaaatttcaaacgttgcagtccattagtgtgtgggaaagccatccaacttagagatagaaagtctaaagtcagatacagtgtggatacagtggtttcggaacttattagggaatacagcaataggtccgccattggtaacacgattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagaaagaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agagatcaaggctggattattcctgaagctcccaccaatgtagagcggcacctcaatagagcggtgcttgtcatgcaatccatcaccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggttccagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgtacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaacatcaggcaagtccaaacggaccaagggcatttcaccatgttgggtgttagggatcgcctagcagtcctcccacgccattcacagcctggcaaaaccatttggatagagcacaaactcgtgaacgtccttgatgcagttgaactggtggatgagcaaggagtcaacttagaattaaccctcatcactctcgataccaacgaaaaatttagggatattaccaaattcatcccagaaaatattagcactgctagcgacgccaccctagtaatcaacacggagcacatgccgtcaatgtttgtcccggtgggcgacgttgtgcagtatggctttttgaatctcagtggcaagcctacccatcgcaccatgatgtacaattttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaagttgtcggcattcacattggtggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcactaagttagaacctagtgtattccatgacgtttttgagggaaataaggaaccagctgtcttgcacagtaaagacccccgacttgaggtagactttgaacaggccctgttttctaagtatgtgggaaacacattacatgaacctgatgagtacattagagaggcagctcttcattatgcaaaccaattaaagcaattagaaattaacacctctcaaatgagcatggaagaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttggaccctaccaccagggatgtgagtagaatgaagttctacatggacaagtatggtcttgatctcccttactctacttatgtcaaggacgagctgcgctcgattgataaaatcaagaaagggaagtcccgcctgatcgaggccagtagtctaaacgattcagtgtacctcagaatggctttcggacatttgtatgaggctttccacgcaaaccctgggacgataactggatcggccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactattcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaagaggcaatctcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggttgttcaggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttacggagacgatgtgctcgctagttatcccttcccaattgattgcttggagctagcaaagactggtaaagagtatggtctgaccatgacccctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttcttcctgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtctttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcaccattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaaccttagacgcaattggctcgaattatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM673244.1_Enterovirus_A71_strain_IM11_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtgcttcggtacctttgtgcgcct-g-ttttata---a--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcactcctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcctat--------ggggcaa-cccatggggcgctctaatatggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaaacca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtgccat-----tgacctt--------------gaagtctgtgact-acccttaattatatcttgaccctcaatacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacactaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtcttaagcaggatccagacaagtttgcaaatcctgttaaagacatctttactgaaatggcagcaccactgaaatccccatccgctgaggcatgcgggtacagtgatcgagtggcgcaattaactattggtaattccactatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagttgataaaccaacgcgcccggacgtttcagtgaacagattttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagttgctgtcctaccagagtacgtcattgggacagtggcaggcggtacggggacgg------aagacagtcaccccccctacaagcagactcaacccggcgctgatggcttcgaattgcaacacccgtatgtgcttgatgctggtatcccaatatcacagttaacagtgtgcccacaccagtggattaatttaaggaccaacaattgtgccacaataatagtgccatacattaatgcactaccttttgattctgctttgaaccactgtaactttggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccccataactatcacattggccccaatgtgttctgaattcgcaggccttaggcaagcagttacgcaagggtttcccaccgagctgaaacctggtacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaatttgctagaattatgccaggtggagaccattttggaggtcaacaa----------tgtgcccacgaatgctactagctta------atggagaggctgcgctttccggtctcagcacaagcgg------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtccaccttgctgggccagttgtgcgggtactacactcaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctacacaccgccaggaggccccttgcccaaggaccgggcgaccgccatgctgggcacgcacgtcatctgggattttggactgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagggcgcatgcccgagatggagtgtttgactactacaccacagggttagttagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttctat--------------------------aggagatagtgtgagcagagcccttactcaagctctaccagca--------cccacaggtcagaacacacaagtgagcagtcatcgactggatacaggtaaagtcccagcacttcaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagttttttcagcagagcgggattggttggagagatagatctccctcttaaaggcacaac-caacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagttattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcatggcaaaccgccaccaatccctcagtttttgtcaaactgtcagaccctccggcacaggtttcagtaccattcatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttggtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctgttcaaagccaatccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------agatttgggcaacagtctggggccatttacgtgggtaactttagagtggttaatcgccatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccagggttgtgacacaattgcccgttgcaattgccagacaggggtgtactattgtaactcgaggagaaaacactacccagttagtttctcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagagcctggtgattgcggcggtatcctcagatgccaacatggcgttgtcggaatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtcagactacatcaaa-ggtctcggagatgcctttgggacaggcttcactgatgcagtctcaagggaggttgaggctctcaagaactatcttatagggtctgaaggagcagtcgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttactcttactgcaaccttagcgctgataggttgccatggtagtccttgggcttggattaaagccaaaacagcttctatcttaggcatccctatcgctcaaaagcaaagcgcctcttggctcaagaaattcaatgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagcaagttcattgattggcttaaggaaaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttacca-ttactagagaatcagatctcaaacctagaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcatatctggccca---------cttctgtcgcaagttccagccgctatacgctacggaagctaaaagagtttatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctggccactggtatcattgctcgggcaatcgctgataaataccactccagcgtgtactcgcttccaccagacccagatcattttgatggatacaagcaacaggtggtaacagtgatggatgacttgtgtcaaaaccccgacggtaaggatatgtctctgttctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgttatcgcatctactaatgccagtaacatcatagtgccaacagtgtctgactccgacgctattcgccgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagattagacgcagggcgagccgccaaactgtgctctgaaaacaacactgcaaacttcaaacgctgcagcccattagtgtgtggtaaagctatccaacttagagatagaaagtctaaagttagatacagtgtggatacggtggtttcagaacttatcagggaatatggtaataggtccgccattggcaacacaatcgaggctctttttcaaggtccacccaagttcaggccaattagaatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaggtgcgccaatactgc-agggaccaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcagtgcttgtcatgcaatctatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgctgggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaagcctgctcttcgcacagcaacagtacagggcccgagccttgacttcgctctctccctgttaagaaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgctgggtgttagggatcgtttagcagtccttccacgtcactcacaacccggcaaaactatttggattgagcacaaactcgtgaacatccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacaccaacgaaaaatttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggcaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggggtggtgacatctgttgggaaggttatcgatattcacattggtggcaatggtagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggggagatccaatgggttaagcccaataaagaaactggaaggctcaacatcaatggaccaacccgcaccaagttggaacccagtgtattccatgatgttttcgagggaagtaaggaaccagccgtcttgcacggtaaagatccccgactggaggtagattttgagcaggccctgttctctaagtatgtgggaatcacactatatgagcctgacgaatacatcaaagaggcagctcttcactatgcaaatcaattaaagcaactacaaattaatacttcccagatgagcatggaggaggcctgctatggtactgagaatcttgaggctatcgatcttcatactagtgcaggttacccctatagtgccctgggaataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctatatggacaaatatggtctcgatctcccttactccacttatgtcaaggatgagttgcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggccagtagtttaaatgattcagtgtacctcagaatgactttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcggccgtggggtgtaaccctgacacattctggagcaagctaccaatcctgcttcctgggtcactcttcgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggtccttagggagatagggtatagtgaaggggcggtctcactcattgaggggatcaaccacacacaccatgtgtatcgtaacaagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggggatgatgtgctcgcaagctaccccttcccaattgattgcttggagttggcaaagactggcaaggagtatggtctgaccatgactcctgctgataagtccccttgttttaatgaagttaattggggtaatgcgaccttcctcaagaggggctttttacccgatgaacaatttccatttttgatccaccctactatgccaatgagggagatccatgaatccattcgatggaccaaggatgcacgaaacactcaagatcatgtgcggtccttgtgcctcctggcatggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccaataggaagagcattggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggtcgtac-------------------------acac---------------ctcaaccc-caccataa----ctctgat------a-g-----tgaactt-g-actg--------gttggggtaaatttgt-tatttacc-a-g-aatagct-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC436267.1_Enterovirus_A71_isolate_V06-2218645_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactttgatacttcggtacctttgtgcgcct-g-ttttata---a--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccgtggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaactaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtgccat-----taacctt--------------gaagtctgtgact-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatctttactgaaatggcagcgccactgaaatccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggacgtttcagtgaacaggttttatacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggggcactcctagttgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccctacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactaccttttgattctgctttgaaccactgtaattttggcctattagttgtacctattagcccactagattacgaccaaggagcgacgccagtaatccccataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaagcagtcacgcaagggtttcccaccgagctgaaacctggtacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacctgctagagttgtgccaggtggagaccattttggaggtcaacaa----------tgtgcccacgaatgccactagctta------atggagaggctgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgcaatggaccgtggcagtccaccctgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctactggcaagatgctcatagcctatacaccgccaggaggccccttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttggactgcaatcgtctgttacccttgtaataccatggatcagcaacactcattacagagcgcatgcccgagatggagtgtttgactactacaccacagggttagttagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcaaacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagccctcactcaagctctaccagca--------cccacaggtcagaacacacaagtgagcagtcatcgactggatacaggtaaagtcccagcactccaagctgctgaaattggagcgtcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagctttttcagcagagcgggattagttggagagatagatctccctcttgaaggcacaac-caacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagttattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcatggcaaactgccaccaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctctagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctgttcaaagccaacccaaactatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttacgtgggtaactttagagtggttaatcgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccagggttgtgacacgattgcccgttgcaactgccagacaggggtatactattgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggtgttgtcgggatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaagaagctatggagcagggcgtgtccgactacatcaaa-ggtctcggagacgcttttgggacaggcttcactgatgcagtctcaagggaagttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggtagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcctcctggctcaagaaattcaatgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagcaagttcattaattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ttattagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctggccca---------cttctgtcgcaagttccagccgctatacgccacggaagctaaaagggtttatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccggattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctggccactggtatcattgctcgagcaatcgctgataaataccactccagcgtgtactcgcttccaccagacccagatcattttgatggatacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgttatcgcatctactaatgccagtaacatcatagtgccaacagtgtctgactctgacgctattcgccgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgccaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtccaaagttagatacagtgtggatacggtggtttcagaacttattagggaatatagcaatagatccgccattggcaacacaatcgaggctcttttccaaggtccacccaagtttaggccaattaggatt---agccttgaagagaaaccagctccagacgctattagtgatctccttgctagtgtagatagtgaagaagtgcgccaatactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcagtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaggaagcctgctcttcgcacagcaacagtacagggcccgagtcttgattttgctctctccctgttaaggaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttggattgagcacaaactcgtgaacatccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacacaaacgaaaaatttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggcaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggtagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggggagatccagtgggttaagcccaataaagaaactggaagactcaacatcaacggaccaacccgcaccaagttggaacccagtgtattccatgatgtcttcgagggaaataaggaaccagctgtcttgcacgataaagatccccgactcgaggtagattttgagcaggccctgttctctaagtatgtgggaaacacactatatgagcctgatgagtatatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctcccaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctatcgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagtcctatatggacaaatatggtctcgatctcccttactccacttatgtcaaggatgagctgcgctcaattgataaaattaagaaagggaagtcccgtttgattgaggccagtagtttaaatgattcagtgtacctcagaatgactttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaatcttgctccctggctcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggtccttagggagatagggtatagtgaaggagcagtctcactcattgagggaatcaaccacacacatcatgtgtatcgtaacaagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaaaggcattgatttggatgaactcaacatggtcgcttatggggatgatgtgctcgctagctaccccttcccaattgattgcttggagttagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtccccttgctttaatgaagttaattggggtaatgcgaccttcctcaagaggggctttttacccgatgaacagtttccatttttgatccaccctactatgccaatgagggagatccatgaatccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccaataggaagagcgttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ194964.1_Human_enterovirus_71_strain_EV71/GDFS/3/2008_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacttcggtacctttgtgcgcct-g-ttttata---a---ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgctcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaaacca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----tactta----tttatt-ggttttgtgccat-----taacctt--------------gaagtctgtgatt-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatctttactgaaatggcagcgccactgaaatccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacattatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataagccaacgcgcccggacgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagtttccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtacagtgcaatgctagtaaattccaccaaggagcactcctagttgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccctacaagcagacccaacccggcgccgacggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaactgtgctacaataatagtgccatacattaatgcactaccttttgattctgctttgaaccactgtaacttcggtctattagttgtacctattagcccactagattacgaccaaggagcgacgccagtgatccccataactatcacattggccccaatgtgttctgaattcgcaggccttaggcaagcagtcacgcaagggtttcctaccgagctgaaacctggtacaaatcaatttttaaccactgatgatggtgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaatttgctagagttatgccaggtggagaccattttggaggtcaacaa----------tgtgcccacgaatgctactagcttg------atggagaggctgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccccttgcccaaggaccgggcgaccgccatgctgggcacgcacgtcatctgggattttggactgcaatcgtctgttacccttgtaataccatggatcagcaacactcattacagagcgcatgcccgagatggagtatttgactactacaccacagggttagttagtatatggtatcagacgaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttctat--------------------------aggagatagtgtgagcagggcccttactcaagctctaccagca--------cccacaggccagaacacgcaagtgagcagtcatcgactggacacaggtaaagtcccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagttttttcagcagagcgggattagttggagagatagatctccctcttgaaggcacaac-caacccaaatggttatgccaactgggacatagacataacaggttacgcgcagatgcgcagaaaggtggagttattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccagtatatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcatggcaaactgctaccaacccctcagtctttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacgttcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggcacgttttcggtgcggactgtagggacctccaagtccaagtaccctttggtagttaggatttacatgagaatgaagcacgttagggcgtggatacctcgcccgatgcgcaaccaaaactacctgtttaaagccaatccaaattacgctggcaa----ctctattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtctggggccatttacgtgggtaactttagagtggttaatcgccatcttgccactcacaatgattgggtaaatcttgtttgggaggatagctctcgcgacttgctcgtgtcatccactaccgcccagggttgtgacacaattgcccgttgcaattgccagacaggggtgtactattgtaactcgaggagaaaacactaccccgtcagtttttcaaaacccagcttgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacatggtcactcagaacctggtgattgcggcggtatccttagatgccaacatggcgttgtcggaatagtgtctactggtggcaatgggcttgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaaa-ggtctcggagatgcttttgggacaggctttactgatgcagtctcaagggaggttgaggctctcaagaactaccttatagggtctgaaggagcagtcgagaaaattttaaaaaatcttattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcacggtagtccttgggcttggattaaagccaagacagcttctatcttaggtatccctattgttcaaaagcaaagcgcttcttggctcaagaaattcaatgacatggccaatgctgctaaggggttagagtgggtctccaataagatcagcaagttcattgattggcttaaggaaaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ttactagagaatcagatctcaaacctggaacaatctgctgcctcacaggaggatcttgaagtcatgtttgggaatgtgtcgtatctggccca---------cttctgtcgcaagttccagccgctatacgccacggaagctaaaagagtttatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctggccactggtatcattgctcgggcaatcgctgataaataccactccagcgtgtactcgcttccaccagacccagatcattttgatggatacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgatggcaaggatatgtctttgttctgtcaaatggtatccaccgtagacttcattccaccgatggcctctcttgaggagaagggagtttccttcacctctaagtttgttatcgcatctactaatgccagtaacatcatagtgccaacagtgtctgactctgacgccattcgccgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagattggatgcagggcgggccgccaagctgtgctctgaaaacaacactgcaaacttcaaacgatgcagcccattagtgtgtggtaaagctatccaacttagagatagaaagtctaaagttagatacagtgtggatacggtggtttcagaacttgtcagggaatatagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaggagaaaccagctccagacgctattagcgacctccttgctagtgtggatagtgaagaagtgcgccaatactgc-agagatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagggcagtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaagcctgctcttcgcacagcaacagtgcagggcccgagtcttgattttgctctctccctgttaaggaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttggatcgaacacaaactcgtgaacattcttgatgcagttgaattggtggatgagcaaggagtcaacctggaattgaccctcatcactcttgacactaacgaaaagtttagggatatcaccaaattcatcccagaaagtattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgtcgtgcagtatggctttttgaatcttagtggcaagcccacccatcgcaccatgatgtacaactttcctactaaagcgggacagtgtggaggagtagtgacatctgttgggaaagtcatcggtattcacattggtggcaatggtagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggggagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttggaacccagtgtattccatgatgtcttcgagggaaataaggaaccagctgtcttgcacggcaaagatccccgactcgaggtagattttgagcaggccctgttctctaagtatgtgggaaacacgctatatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctcccagatgagcatggaggaagcctgctatggtactgagaatcttgaggctatcgatcttcatactagtgcaggttacccctatagtgccctgggaataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaaatcctatatggacaaatatggtctcgatctcccttactccacttatgtcaaggatgagctgcgctcaattgataaaattaagaaagggaagtcccgtctgatcgaggccagcagtttaaatgattcagtgtacctcagaatgactttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaatcttgcttcctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaaatggtccttagggagatagggtatagtgaagaggcggtctcactcattgagggaatcaaccacacacaccacgtgtatcgtaacaagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccatcttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggggatgatgtgcttgctagctaccccttcccaatcgattgcttggagttagcaaagactggcaaggagtatggtctgaccatgactcctgcagataagtccccttgctttaatgaagttaattggggtaatgcgaccttcctcaagaggggctttttacctgatgagcagtttccatttttgatccaccctactatgccaatgcgggagatccatgaatccattcgatggactaaggacgcacgaaacactcaagatcatgtacggtccttgtgcctcctagcatggcataatggtaagcaagaatatgaaaaatttgtgagcacaattaggtctgtcccaataggaagagctttggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctacac-------------------------acac---------------ctcaaccc-cactagaa----atctggt------c-g-----cgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ965759.1_Human_enterovirus_71_strain_540V/VNM/05_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata---a---ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtagcatcatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcctat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttgtattggctgcttatggtgacaattgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattattacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccattgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgtccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagttgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaactgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatatataaacgcactgcctttcgattctgccttgaaccactgtaactttggcctattagttgtgcccattagcccactagattacgatcaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgagttcgcaggtcttaggcaagcggttacgcaagggtttcccactgagctgaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacccattctaccaaacttccaccccaccccgtgtatccatatacctggtgaggttaggaatttgctagagttatgccaggtggagaccattttggaggtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgaactatgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacacacgtcatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagtaacactcactacagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaaaaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacaggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagcccttactcaagctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggtaaggttccagcactccaagctgctgaaattggggcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgaaaccactctcgatagtttcttcagcagagcaggattagttggagagatagatctcccgcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggacaagttgtcccacagttgctccaatatatgtttgtgccacctggagcccctaagccggattccagggaatccctcgcatggcaaaccgctaccaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgagtatggggcatgtcctaacaacatgatgggcacattctcagtgcggactgtagggacctccaagtccaagtaccctttggtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactatctattcaaagctaacccaaattatgctggcaa----ctccattaaaccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggccatttacgtgggtaactttagagtagttaaccgtcatcttgccacacacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacggttgcccgttgcaattgccagacaggggtgtattattgtaactcgaggagaaaacactacccagtcagtttttcaaagcccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgtggtggtatccttagatgccaacatggcgtcgtcggtatagtatctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtttcaagggaggttgaagctctcaagagctatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcaggagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttccattttaggcatccctatcgctcaaaagcaaagtgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagcaaattcattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacaattgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccagccgctatacgccactgaagctaaaagagtttatgccctggagaagagaatgaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaaatctctagctactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgatggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccacccatggcttcccttgaggagaagggagtttccttcacctctaagtttgttatcgcatctactaatgccagtaacatcatagtgccaacagtgtctgactctgacgctattcgtcgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagttagatacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcagtgcttgtcatgcaatccatcgccacagtagtggcagttgtttcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtacttaagaaacctgcccttcgcacagcaacggtgcagggcccgagccttgattttgctctctccctactgaggaggaacgtcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttggattgagcacaaactcgtgaacatccttgatgcagttgagttggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacactaacgaaaagtttagggatatcaccaaattcatcccagaaaatatcagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttaaatctcagtggtaagcctactcatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacccagtgtattccatgatgtcttcgagggaagtaaagaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgagcatgccctgttctctaagtatgtgggaaatacactatatgagcctgatgagtacatcaaagaggcagcccttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccactagagacgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccctactccacttatgtcaaggacgagctgcgctcaattgataaaattaagaaagggaagtcccgcctgattgaggccagtagtttaaatgattcagtgtacctcagaatggcttttggccatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgcaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccccgtctggttcagagcactagaattggtccttagggagatagggtatagtgaaggagcagtctcactcattgaggggatcaaccacacacaccacgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggatgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagatgatgtgctcgccagctaccccttcccaattgattgcttggagttagcaaagactggcaaggagtatggcctaaccatgactcctgcagacaagtctccttgctttaatgaagttaattggggtaatgcgaccttcctcaagaggggctttttgcccgatgaacagtttccatttttgatccaccctactatgccaatgagggaaatccatgagtccattcgatggaccaaggacgcacgaaacacccaagaccatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccagtagggagagcgctggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>GQ231937.1_Human_enterovirus_71_strain_TW/71428/05_complete_genome
------------------ttaaaa--cag--ct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgtgcct-g-ttttata---a----cc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtagcatcatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttcccacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattattacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccattgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgtccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagtttccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagttgctgtcttaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttacaagcagactcaacccggcgccgatggtttcgaattgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatatataaacgcactgcctttcgattctgccttgaaccactgtaactttggcctattagttgtgcccattagcccactagattacgatcaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaagcggttacgcaagggtttcccactgagctgaaacctggcacaaatcaatttttaaccaccgatgatggcgtctcagcacccattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaatttgctagagttatgccaggtggagaccattttggaggtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctatgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtccaccttgctgggtcagttatgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacacacgtcatctgggattttgggctgcaatcgtctgttacccttgtgataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaaaaacttcactatgaagttgtgcaaggatgctagtgatatcttgcaaacaggcaccatccaaggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagcccttactcaagctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggtaaggttccagcactccaagctgctgaaattggggcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgaaaccactctcgatagtttcttcagcagagcagggttagttggagagatagatctcccgcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagaattcacttttgttgcgtgcacacctaccggggaagttgtcccacagttgctccaatatatgtttgtgccacctggagcccctaagccggattccagggaatccctcgcatggcaaaccgctaccaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccatttatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgagtatggggcatgtcctaacaacatgatgggcacattctcagtgcggactgtagggacctccaagtccaagtaccctttggtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactatctattcaaagctaacccaaattatgctggcaa----ctccattaaaccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggccatctacgtgggtaactttagagtagttaaccgtcatcttgccacacacaatgattgggtaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgcgacacgattgcccgttgcaattgccagacaggggtgtactattgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtggaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgtggtggtatccttagatgccaacacggcgtcgtcggtatagtatctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtttcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcaggagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccctgggcttggatcaaagccaaaacagcttccattttaggcatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacaattgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctggccca---------cttctgtcgcaagttccagccgctatacgccactgaagctaaaagagtttatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagctactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgatggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagac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>FJ357373.1_Human_enterovirus_71_isolate_S0584-TW04_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata---a----cc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtagcgccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gtggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgcccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgaccctcaacacagttaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaattcaaactcagccactg-agggttccaccataaactacaccaccattaattattacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccactgaagtccccatctgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgtccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttgactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagccaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtaccatatataaacgctctgccttttgattctgccttgaaccactgtaactttggcctattagttgtgcccattagcccactagattacgatcaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaagcggttacgcaagggtttcccactgagctgaaacctggcacaaatcaatttttaaccaccgatgatggcatttcagcacccattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttgtgcccggtggagaccattttggaggtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctatgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacaggcaccatccagggagacagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagcccttactcaagctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggtaaggttccagcactccaagctgctgaaattggggcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgaaaccactctcgatagtttcttcagcagagcaggattagttggagagatagatctcccgcttaaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacagttgctccaatatatgtttgtgccacctggagcccctaagccggattccagggaatccctcgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacgttcggagaacacaaacaggagaaagatcttgagtatggggcatgtcctaacaacatgatgggcacattctcagtgcggactgtggggacctccaagtccaagtaccctttggtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctattcaaagctaacccaaattatgctggcaa----ctccattaaaccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggccatttacgtgggtaactttagagtagttaaccgtcatcttgctacgcacaatgattgggcaaaccttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactattgtaactcgaggagaaaacattacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgtggtggtatccttagatgccaacatggcgtcgtcggtatagtatctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaaa-ggtctcggagatgctttcgggacaggcttcactgatgcagtttcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcaggagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacggcttccatcttaggcatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagtaaattcattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacaattgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaaatcatgtttgggaatgtgtcgtacctagccca---------cttctgtcgcaagttccagccgctatacgccactgaagctaaaagagtttatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccgggcactgggaagtctctagctactggtatcattgctcgagcaatcgccgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgatggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggtaaggatatgtctttattctgtcaaatggtatccaccgtagatttcattccacccatggcttcccttgaggagaagggagtttccttcacctctaaatttgttattgcatctactaatgccagtaacatcatagtgccaacagtgtctgactctgacgctattcgtcgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagttagatacagtgtggatacggtagtctcagaacttattagggaatacagcaataggtccgccattggcaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcagtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgttatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacggtgcagggcccgagccttgattttgctctctccctgctgaggaggaacgtcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttggattgagcacaaactcgtgaacatccttgatgcagttgagttggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacactaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgccaccctggtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagagcccagtgtattccatgatgtcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgagcacgccctgttctctaagtatgtgggaaatacactatatgagcctgatgagtacatcaaagaggcagcccttcattatgcaaatcaattaaagcgactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagagacgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagctgcgctcaattgataaaattaagaaagggaagtcccgtctgattgaagccagtagtttaaatgattcagtgtacctcagaatggctttcggccatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgcaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccccgtctggttcagagcactagaattggtccttagggagatagggtatagtgaaggagcagtctcactcattgaggggatcaaccacacgcaccatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggatgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagatgatgtgctcgccagctaccccttcccaattgattgcttggagttagcaaagactggcaaggagtatggtctaaccatgactcctgcagataagtctccttgctttaatgaagttaattggggtaatgcgaccttcctcaagaggggctttttgcccgatgaacagtttccatttttgatccaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacacccaagaccatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccagtaggaagagcgctggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>EF373576.1_Human_enterovirus_71_strain_E2004104-TW-CDC_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata---a---ccc---c---cccc-c------ag-t-gaaacttagaag--------------tagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtagcatcatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccagatagaaattaccctggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattattacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccattgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccctcccacccctgaatgcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgtccggatgtttcagtgaacaggttttatacattggacacaaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatatataaacgcactgccttttgattctgccttgaaccactgtaactttggcctattagttgtgcccattagcccactagattacgatcaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaagcggttacgcaagggtttcccactgagctgaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacccattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattttggaggtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctatgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccagaaaaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacaggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagcccttactcaagctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggtaaggttccagcactccaagctgctgaaattggggcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgaaaccactctcgatagtttcttcagcagagcaggattagttggagagatagatctcccgcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggcaagttgtcccacagttgctccaatatattacacacccccaggaagcccctaagccggattccagggaatccctcgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgagtatggggcatgtcctaacaacatgatgggcacattctcagtgcggactgtagggacctccaagtccaagtaccctttggtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctattcaaagctaacccaaattatgctggcaa----ctccattaaaccaactggtgccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggccatttacgtgggtaactttagagtagttaaccgtcatcttgccacacacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactattgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgtggtggtatccttagatgccaacatggcgtcgtcggtatagtatctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtttcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcaggagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttccatcttaggcatccctatcgctcaaaagcaaagtgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagcaaattcattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacaattgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccagccgctatacgccactgaagctaaaagagtttatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagctactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgatggttacaagcaacaggtggttacagtgatggatgacttgtgccaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccacccatggcttcccttgaggagaagggagtttccttcacctctaagtttgttatcgcatctactaatgccagtaacatcatagtgccaacagtgtctgactctgacgctattcgtcgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctagactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagttagatacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcagtgcttgtcatgcaatccatcgccacagtagtggcagttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgcccttcgcacagcaacggtgcagggcccgagccttgattttgctctctccctgctgaggaggaacgtcaggcaagttcaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttggattgagcacaaactcgtgaacatccttgatgcagttgagttggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacactaacgaaaagtttagggatatcaccaaattcatcccagaaaatatcagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagtccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacccagtgtattccatgatgtcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgagcatgccctgttctctaagtatgtgggaaatacactatatgagcctgatgagtacatcaaagaggcagcccttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagagacgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagctgcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggccagtagtttaaatgattcagtgtacctcagaatggctttcggccatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgcaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccccgtctggttcagagcactagaattggtccttagggagatagggtatagtgaaggagcagtctcactcattgaggggatcaaccacacacaccacgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggatgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagatgatgtgctcgacagctaccccttcccaattgattgcttggagttagcaaagactggcaaggagtatggtctaaccatgactcctgcagataagtctccttgctttaatgaagttaattggggtaatgcgaccttcctcaagaggggctttttgcccgatgaacagtttccatttttgatccaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacacccaagaccatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccagtaggaagagcgctggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa-------a------------------aaaaaa-----------------------------------------------------------------------------------------------------
>DQ133458.1_Human_enterovirus_71_strain_984_polyprotein_gene_complete_cds
-----------------tttaaaa--cag--ct-gtgggttg-t-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c---ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-ttgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtagcatcatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atccttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccactataaactacaccaccattaattattacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttatacgttggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtctttgggcaaaatgcacaattccactacctttaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatatattaacgcactgccttttgattctgccttgaaccactgtaactttggcctattagttgtgcccattagcccactagattacgatcaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaagcggttacgcaagggttccctactgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacccattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattttggaggtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctatgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttggactgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagtcaggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagcccttactcaagctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgaaacacgctgtgttcttaactcgcacagcacagctgaaaccactctcgatagtttcttcagcagagcaggattagttggagagatagatctcccgcttaaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggagtccctcgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggcacattctcagtgcggactgtagggacctccaagtccaagtaccctttggtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggccatttacgtgggtaactttagagtggttaaccgtcatcttgccacacacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactattgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctggtctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggttactcagaacctggtgattgtggtggtatcctcagatgccaacacggcgtcgtcggtatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtttcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcaggagtgattacgacatggttacccttactgcaaccttagcgctgataggtcgtcatggcagcccgcaggcttggatcaaagccaaaacagcttccatcttaggcatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagaatgggtttccaataagatcagcaaattcattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattccttaataacttgaaacaattgccg-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccagccgctatacgccactgaagctaaaagagtttatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagctactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgatggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggcaaggatatgtccttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgttatcgcatctactaatgccagtaacatcatagtgccgacagtgtctgactctgacgctattcgtcgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctattcaacttagagatagaaagtctaaagttagatacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaattgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattggcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcagtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaggcaagtgcttaagaaacctgcccttcgcacagcaacagtgcagggcccgagccttgattttgctctctccctgctgaggaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagcagtcctcccacgtcattcacaacccggcaaaactatttggattgagcacaaactcgtgaacatccttgatgcagttgagttggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacactaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacccagtgtattccatgatgtcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgagcacgccctgttctctaagtatgtgggaaatacactatatgagcctgatgagtacatcaaagaggcagcccttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagagacgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagctgcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggccagtagtttaaatgattcagtgtacctcagaatggctttcggtcatttgtatgaggctttccacgcaaatcctgggacggtaactggatcagccgtggggtgcaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccccgtctggttcagagcattagaattggtccttagggagatagggtatagtgaaggagcagtctcactcattgaggggatcaaccacacacaccatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagatgatgtgctcgccagctaccccttcccaattgattgcttggagttagcaaagactggcaaggagtatggtctaaccatgactcctgcagataagtctccttgctttaatgaagttaattggggtaatgcgaccttcctcaagaggggctttttacccgatgaacagttcccatttttgatccaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactyaagaycatgtgcggtccttgtgcctcttagcatggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccagtaggaagagcgctggctatcccaaattatgaaaaccttagacgtaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcgaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>DQ133459.1_Human_enterovirus_71_strain_1235_polyprotein_gene_complete_cds
-----------------tttaaaa--cag--ct-gtgggttg-c-acccactcaca-gggccccc-t-gggcgcaagcactctggcacctcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aacca--gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttcaaccaaaaactacaccaccattaattactacaaagactcctatgctgctacagcaggcaaacagagtctcaagcaggatccagataagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgccacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaagt------------------cgtccaaggggtggtactggaagttcccagatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagaatacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccactgtaactttggcctattagttgtgcctattagtccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggctccaatgtgttctgaattcgcaggtcttaggcaagcagtcacacaagggtttcccaccgagctgaaacctggcacaaaccaatttttaaccactgatgatggtgtttcagcacctatcctaccaaacttccaccccaccccgtgtattcatatacccggtgaagttaggaacttactagagttatgccaggtggagaccattttggaggtcaacaa----------tgtgcccacgaatgccactagctta------atggagaggctgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgttatttgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggagcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcatgcagacgggtaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagccctcactcaagccctaccagca--------cccacaggccagaacacacaggtgagcagtcatcggctggatacaggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttctttagcagagcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggaactattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccagtatatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttaccaatggttttatgacggatatcctacgttcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggcacgttctcagtgcggaccgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtacgagtcgcacagcgat---taccac---------------------------------------tcttggg------------------------------------------aaatttgggcagcagtctggggccatttacgtgggtaactttagagtggttaaccgtcatcttgccactcacaatgattgggcgaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatctaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactattgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggccactcagaacctggtgattgcggtggtatccttagatgccaacatggtgtcgtcggtatagtgtctactggtggcaatgggcttgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacgggcttcactgatgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaaccttattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaagatcaaagcgcttccttgttcaagaaattcaatgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagcaaattcattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctggagaatcagatctcgaacttggaacaatctgctgcctcacaagaggacctcgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccagccgctatacgccacggaagctaaaagagtttatgccctggaaaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactagtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgatggttacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggcaaggatatgtctttgttctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaaatttgttattgcatctactaatgccagtaacatcatagtgccaacagtgtctgactctgacgctattcgccgcaggttctacatggattgtgacattgaagtgacagactcgtataaaacagatctaggtagactggatgcaggacgagccgctaaactgtgttctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagttagatacagcgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggcccacccaagtacaggccaattaggatt---agccttgaagagaaaccagctccagacgctattagcgatctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggaccaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcagtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctgctgaggaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttggattgagcacaaactcgtgaacatccttgatgcagttgaattggtggatgagcaaggagtcaatctggaattaactctcattactcttgacactaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgccactctagtgatcaacacggagcacatgccctcaatgtttgttccggtgggtgacgttgtgcagtatggtttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgtcgggaaggttatcggtattcacattggtggtaatggcagacaaggtttttgcgcaggcctcaaaagaagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgtaccaagttagaacccagtgtgttccatgatgtcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgagcaggccctgttttctaagtatgtgggaaatacactatacgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaagcctgctacggcactgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccctagggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagctctacatggacaaatacggtcttgatctcccttactccacttatgtcaaggatgagctgcgctcaattgataaaattaggaaagggaagtcccgtctgattgaggccagtagcttaaatgattcagtgtacctcagaatgaccttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgcaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggtccttagggagatagggtatagtgaaggagcagtctcactcatcgagggaatcaaccacacacaccatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcaggttgctcgggaacatccattttcaactcaatgatcaacaatattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagatgatgtgctcgctagctaccccttcccaattgattgcttggagttagcaaagactggcaaggagtatggtctaaccatgactcctgcagataagtctccttgctttaatgaagttaattggggtaatgcgaccttcctcaagaggggctttttacccgatgaacagtttccatttttgatccaccctactatgccaatgagggagatctatgagtccattcgatggaccaaggacgcacgaaacactyaagatcatgtgcggtccttgtgccttctagcatggcataatggtaagcaagaatatgagaaattcgtgagcacaattaggtctgtcccagtaggaagagcgttggccatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctacac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC436266.1_Enterovirus_A71_isolate_V05-2243055_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggcacctcggtacctttgtgcgcct-g-ttttaca---c---ccc---c---tccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtaacaccatgaaagttgcagagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaatcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatctgg--tgtgcaacagagcgattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-actcttaattatatcttgaccctcaacacagttaaa-----catgggttcgcaggtgtctacacaacgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattattacaaagactcttatgctgccacagcaggyaaacagagtctcaagcaagatccagacaagtttacaaatcctgttaaggacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtggatatagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaggcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtctaagggatggtactggaagttcccggatgtgttaactgaaatcggggtttttgggcaaaatgcacaattccactacctctaccggtcagggttttgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaattacaacacccgtatgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaacttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttaaaccactgtaactttggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattagccccaatgtgttctgaattcgcaggtcttagacaagcagttacgcaagggtttcccactgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagaattatgccaggtggagaccattttggaggtcaacaa----------tgtacccacgaatgccactagttta------atggagagactgcgctttccggtctccgcacaagcag------ggaaaggcgaactgtgtgcggtgttcagagccgatcctgggcgtaatggaccgtggcagtccaccttgctgggtcagttgtgtgggtactacacccagtggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtgataccatggatcagcaacactcactacagggcgcatgcccgagatggagtgtttgactactacaccacaggattagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaagatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagccctcactcaagctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactctcgatagtttcttcagcagagcgggattagttggagagatagatctccctcttgaaggcacaac-caacccaaatgggtatgccaactgggacatagatataacaggctacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccggattccagggaatccctcgcatggcaaaccgccaccaacccctcagtttttgtcaagttgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttaccaatggttctatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgccccaataatatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagagcgtgggtacctcgcccaatgcgcaaccaaaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggcaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggccatttacgtgggtaactttagagtggttaaccgtcaccttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcacaaggttgtgacacgattgcccgttgcgattgccagacaggggtgtactactgtaattcgaggagaaaacactacccagtcagtttctcaaaacccagcctgatttatgtggaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcaccgggtcactcagaacctggtgattgcggtggtattcttagatgccaacatggcgtcgtcggtatagtgtccactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaggctatggagcagggtgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtctcaagggaggttgaagctctcaagaactatcttgtagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttactcttactgcaaccttagcactgataggttgtcatggcagtccttgggcttggatcaaagccaaaacggcttctatcttaggaatccctatcgctcaaaagcaaagcgcttcctggcttaagaagttcaatgacatggccaacgctgctaaggggctagagtgggtttccaataagatcagcaagttcattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataatttgaaacagttgcca-ctgctagagaatcagatctcaaacttagaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctatacgccacggaagcgaaaagagtttatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcgccaggcaccgggaagtctctagccactggtattattgcacgagcaatcgctgataagtaccactccagcgtgtactcactcccaccagacccagatcattttgatggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgttatcgcatctactaatgccagtaacatcatagtgccaacagtgtctgactctgacgccattcgtcgcaggttctacatggattgtgacattgaagtgacggactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagttagatacagtgtggatacggtagtttcagaacttattagggaatacaacaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaagccagccccagatgctattagcgacctccttgctagtgtagacagtgaagaagtgcgccagtactgt-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcagtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcaggatttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccaagccttgattttgctctctccctgctgaggaggaatgtcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgtttagcagttcttccacgtcactcacaacccggcaaaactatttggattgagcacaaactcgtgaacatccttgatgcagttgaattggtggatgagcaaggtgtcaacctggaactaacccttatcactcttgacactaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgctaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctactcatcgcactatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggtcaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacccagtgtattccatgatgttttcgagggaaataaggaaccagctgtcctgcacagtaaagacccccgactcgaggtagattttgagcaggctctgttctctaaatatgtgggaaatacactatgtgagcctgatgagtatatcaaagaggcagctcttcattatgcaaatcaattgaagcaactagaaattaacacctctcaaatgagtatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccttggggataaagaaaagagacatcttagaccctgccaccagggacgtgagtagaatgaagttctacatggataaatatggccttgatctcccttactccacttatgtcaaggacgagctgcgctcgattgataaaattaagaaagggaagtcccgtctgattgaggcaagtagtttaaatgattcagtgtacctcagaatggcttttggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatctgcagtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactcttcgcctttgactactcaggctatgatgctagccttagccctgtctggttcagagcattagaattggtccttagggagatagggtatagtgaaggagcagtctcactcatagagggaatcaatcacacacaccatgtgtatcgtaataagacctattgtgtgcttggagggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcattgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgccagctaccccttcccaattgattgcttggagttagcaaagactggcaaggagtatggtctaaccatgactcctgcagataagtctccttgctttaatgaagttaattggggtaatgcgaccttcctcaagaggggctttctacccgatgaacagtttccatttttgatccaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctggcatggcataatggcaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccagtaggaagagcgttggctattccaaattatgaaaatcttagacgcaattggctcgaattatttt-----agaggctatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>GQ279369.1_Human_enterovirus_71_strain_SZ/HK08-5_complete_genome
------------------ttgaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttatg---t---ccc---c---cccc-c------ag-t-gcaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaggttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaaacca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaatcata-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----tacctg----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttgattatattttgaccctcaacacagctaaa-----catgggttcgcaggtgtccacgcagcgctccggttctcatgaaaattcaaactcagccaccg-agggttccaccataaactacaccaccattaattattacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtagcgcaattaactattggtaactccaccatcaccacgcaagaagcggctaacatcatagttggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataagccaacgcgcccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaaattcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtatccacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgttctaccagagtacgtcattgggacagtggcaggcggcacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacatcagtggattaatttgagaaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattccgccttgaaccactgcaattttggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattagccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaaggatttcccaccgagttgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggaaaccattctagaggttaacaa----------tgtgcccacgaatgccactagttta------atggagagactgcgctttccagtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagctgatcctgggcgaaatgggccgtggcagtccaccttgctgggtcagttgtgtgggtattacacccaatggtcaggatcattggaagtcaccttcatgtttactggatcctttatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtccgttacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcctaatacagcctatataatagcactagcggcagcccaaaagaatttcactatgaagttgtgcaaggatgctagtgatatcctacaaacgggcaccatccagggagatagg--------gtagcagatgtaattg---aaagttccat--------------------------aggggatagcgtgagcagagccctcactcaagctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgatcgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatcttcctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcacaaatgcgcagaaaggtggagttattcacctacatgcgctttgatgcagagttcactttcgttgcgtgcacacctaccggggaagttgtcccacaattgctccaatatatgtttgtaccacctggagcccctaagccagactccagggagtccctcgcatggcaaaccgccaccaacccctcagtttttgtcaagttgtcagaccctccagcacaggtttcagtaccattcatgtcacccgcgagtgcttaccaatggttctatgacggatatcccacattcggggaacacaaacaggagaaagatcttgagtatggggcgtgccctaataacatgatgggtacgttctcagtgcggactgtagggacttccaaatccaagtatcctttagtggttaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccaaaactacctattcaaggccaacccaaattatgctggcaa----ctccattaagccaactggtactagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggagccatttatgtgggtaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaggacagttctcgcgacttgctcgtgtcgtccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactattgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcgcagggtcactcagaacctggagattgtggtggtatccttagatgccaacatggcgtcgtcggtatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttactcttactgcaacgttagcgctgataggttgtcatggcagtccttgggcttggattaaagccaagacagcttctattttaggcatccctattgctcaaaagcaaagtgcctcctggctcaagaagtttaatgacatggccaatgctgctaaggggttagagtgggtttccaataaaatcagcaaatttattgattggcttaaggagaaaatagtaccagcagctaaggagaaggttgaattcctgaataacttgaaacagttgcca-ctactagagaatcagatctcaaacttggagcaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccagccgctatacgccacggaagccaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagtgtgtactctcttccaccagacccagatcattttgatggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggcaaggatatgtctttgttctgtcaaatggtatccaccgtagac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>JX678874.1_Human_enterovirus_71_strain_CQ03-1/CQ/CHN/2003_complete_genome
------------------ttaaaa--c-g-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttaca---c---ccc---c---cccc-c------ag-t-gaaatttagaag--------------cagca-caccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccgggctgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgctcgttatccggctaaccacttcggaaaacc-tagtagcaccataaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggttgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctggttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagcaattgtt-----taccta----tttatc-ggttttgtaccat-----taacctt--------------gaagtccgtgacc-acccttaattatatcttgaccttcaacacagctaaa-----catgggttcacaggtgtccacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacactaccattaattattacaaagactcctatgctgctacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcactacgcaagaagcggcaaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccagatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctttaccggtcagggttctgcattcacgtgcaatgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgttattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttataagcagactcaacccggcgctgatggcttcgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtatgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacataaacgcactaccctttgactctgccttgaaccactgcaactttggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccccataactatcacattggccccaatgtgttctgaatttgcaggtcttaggcaagcagttacgcaagggtttcccactgagttgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaactttcaccctaccccgtgtatacatatacctggtgaagttaggaacttgctagagctatgccaggtggagaccattttggaggtcaacaa----------tgtacccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtattcagagccgatcctgggcgaaatggaccgtggcagtccaccttgttgggtcagttgtgcgggtactacacccagtggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgcttatagcctatacaccgccaggaggccctttgcccaaagaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactactacaccacagggttggtcagtatatggtatcagacaaattatgtggttccaattggggcacccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttatgcaaggatgctagtgatatcctgcagaccggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagacagtgtgagcagagccctcactcaagctctaccggca--------cccacaggtcagaacacacgggtgagcagtcatcgattggacacaggtaaggttccagcactccaagctgctgagattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcactgctgagaccaccctcgatagctttttcagcagagcgggattagttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgctaactgggacatagatataacaggttacgcgcaaatgcgcagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggcaagttgtcccacaattgctccaatatatgtttgtcccacctggggcccccaagccagattccagggaatccctcgcatggcaaactgccaccaacccctcagtttttgttaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtaggaacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctgttcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacggcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtccggggccatttacgtgggtaactttagagtggttaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgcttgtgtcatctaccactgcccaaggttgtgacacgattgcccgttgcaattgccaaacaggggtgtactattgtaactcgatgagaaaacactacccagtcagtttttcgaagcccagcctgatctatgtagaggctagtgagtattacccagccagataccagtcacatctcatgctcgcacaaggtcactcagaacctggtgattgcggcggtatccttagatgccagcatggcgtcgtcggtatagtgtctactggtggcaatggtctcgttggctttgcagacgtcagggatctcttgtggttggatgaagaagctatggagcagggcgtgtccgattacatcaaa-ggtctcggggatgctttcgggacaggtttcactgatgcagtctcgagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaatattgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttacccttactgcaaccttagctttgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaatgctgctaaggggctagagtgggtttccaacaagatcagcaaattcatcgattggcttaaggagaaaattgtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------tttctgtcgcaagttccagccgctatacgccacagaagccaaaagagtttatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctcgccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgctaccaccagacccagatcatttcgatggttacaagcaacaggtggttacagtaatggatgacttgtgtcaaaaccccgacggcaaggatatgtctttgttctgtcaaatggtatccaccgtagatttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgttatcgcatctaccaatgccagtaacattatagtgccaacagtgtctgactctgacgctattcgccgcaggttctatatggattgtgacattgaagtgactgactcatacaaaacagatctaggtagactggatgcagggcgggccgctaaactgtgctctgaaaacaacaccgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaactcagagatagaaaatctaaagttagatacagtgtggacacggtagtttcagaacttattagggaatacaacaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaggagaaaccagccccagacgctattagcgatctccttgctagcgtagacagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttagtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcccaagcaagtacttaagaaacctgttcttcgcacagcaacagtacaaggcccgagccttgattttgctctctccctgctaaggaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagcagtcctcccacggcactcacaacccggcaaaactatttgggttgagcacaaactcgtgaacatccttgatgcagttgaattggtggatgagcaaggagtcaacctggaactaacccttatcactcttgacactaatgaaaagtttagggatatcaccaaattcatcccagaaaatatcagtactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgttccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttattggtattcacattggcggtaatggcagacaaggtttttgcgcaggcctcaaaaggagctactttgctagtgaacaaggagagatccagtgggtcaagcccaataaagaaactggaagactcaacatcaatggaccgacccgcaccaagttagaacccagtgtgttccatgatgtcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgagcaggccctgttctctaagtatgtgggaaacacactatatgagcctgacgagtacatcaaagaggcagcccttcattacgcaaatcaattgaagcagctagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcctagaccctgccaccagggatgtgagtaaaatgaaattctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagctccgctcaattgataaaattaagaaagggaagtcccgtctgattgaggctagtagcttaaatgattcagtgtacctcagaatggctttcggtcacctgtatgaggctttccacgcgaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgattactcaggttacgatgctagccttagccctgtctggttcagggcattagaattggtcctcagggagatagggtatagtgaaggagcagtctcactcattgagggaatcaaccacacacaccatgtgtatcgtaataagacctattgtgtgcttgggggaatgccctcaggctgttcaggaacatccattttcaactcaatgatcaacaacattattatcagagcactgcttataaaaacatttaagggcattgatttggatgagctcaacatggtcgcttatggagatgatgtgctcgccagctaccccttcccaattgattgcttggagttagcaaagactggcaaggagtatggtctaaccatgactcctgcagataagtctccttgctttaatgaagttaattgggataatgcgaccttcctcaagaggggctttttacccgatgaacagtttccatttttgatccaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagaccatgtgcggtccttgtgtctcctagcatggcacaatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccagtaggaagagcattggctattccaaactatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcgaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB550338.1_Human_enterovirus_71_genomic_RNA_complete_genome_strain:_75-Yamagata-org
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaaccacttcggaaaacc-tagtagcaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggttgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctggttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaatagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtggcc-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcacaggtgtccacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacactaccattaattattacaaagactcctatgctgccacagcaggcaagcagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcactacgcaagaagcggcaaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgccacagcagtggataaaccaacgcgcccagatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccggtcagggttctgtattcacgtgcaatgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgttattgggacagtggcgggcggtacagggacgg------aagacagtcaccccccttataagcagactcaacccggcgctgatggcttcgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtatgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacataaacgcactgccctttgattctgccttgaaccactgcaactttggcctgttagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaatttgcaggtcttaggcaagcagttacgcaagggtttcccactgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaactttcaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagctatgccaggtggagaccattttggaggtcaacaa----------tgtacccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtattcagagccgatcctgggcggaatggaccgtggcagtctaccttgttgggtcagttgtgcgggtactacacccagtggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaagaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtatttgactactacaccacagggttggtcagtatatggtatcagacaaattatgtggttccaattggggcacccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagacagtgtgagcagagccctcactcaagctctaccggca--------cccacaggtcagaacacacaggtgagcagtcatcgattggacacaggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccaccctcgatagcttcttcagcagagcgggattggttggagagatagatctccctcttgaaggcacaac-taacccaaatggttatgctaactgggacatagatataacaggttacgcgcaaatgcgcagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggcaagttgtcccacaattgctccaatatatgtttgtcccacctggggcccccaagccagattccagggaatccctcgcatggcaaactgccactaacccctcagtttttgttaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacccgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtaggaacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctgttcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacggcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacagtccggggccatttacgtgggtaactttagagtggttaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatctaccaccgcccaaggttgtgacacgattgcccgttgcaattgccaaacaggggtgtactattgtaactcgatgagaaaacactacccagtcagtttttcgaagcccagcctgatctatgtagaggctagtgagtattacccagccagataccagtcacatctcatgctcgcacaaggtcactcagaacctggtgattgcggcggtatccttagatgccaacatggcgtcgtcggtatagtgtctactggtggtaatggtctcgttggctttgcagacgtcagggatctcttgtggttggatgaagaagctatggagcagggcgtgtccgattacatcaaa-ggtctcggggatgctttcgggacaggcttcactgatgcagtctcgagggaggttgaagctcttaagaactatcttatagggtctgaaggagcagtcgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttactgcaaccttagctttgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggctagagtgggtttccaacaagatcagcaaattcatcgattggcttaaggagaaaattgtgccggcagccaaggagaaggttgaattcctaaataacttgaaacagttgccg-ctactagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccagccgctatacgccacagaagccaaaagagtttatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgatggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggcaaggatatgtctttgttctgtcaaatggtatccaccgtagatttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgttatcgcatctaccaatgccagtaacattatagtgccaacagtgtctgactctgacgctattcgccgcaggttctatatggattgtgacattgaagtgacagactcatacaaaacagatgtaggtagactggatgcagggcgggccgctaaactgtgctctgaaaacaacaccgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaactcagagatagaaaatctaaagttagatacagtgtggacacggtagtttcagaacttattagggaatacaacaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctcctcgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaaactcccaccaatgtagagcggcaccttaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttagtgtatgtcatctacaagctctttgcagggtttcagggtgcatattctggtgctcctaagcaagtgcttaggagacctgttcttcgcacagcaacagtacaaggcccgagccttgattttgctctctccctgttgaggaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagcagtcctcccacggcactcacaacccggcaaaactatttgggttgagcacaaactcgtgaacatccttgatgcagttgaattggtggatgagcaaggagtcaacctggaactaaccctcatcactcttgacactaatgaaaagtttagggatatcaccaaattcatcccagaaaatatcagtactgccagtgatgccaccctagtgatcaacacggagtacatgccctcaatgtttgttccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttattggtattcacattggcggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggtcaagcccaataaagaaactggaagactcaacatcaatggaccgacccgcaccaagttagaacccagtgtgttccatgatgtcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgagcaggccctgttctctaagtatgtaggaaatatactatatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaatcaattgaagcagctagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcctagaccctaccaccagggatgtgagtaaaatgaaattctacatggacaaatatggtcttgatctcccttactccacttatgttaaggacgagctccgctcaattgataaaattaagaaagggaagtcccgtctgattgaggctagtagtttaaatgattcagtgtatctcagaatggctttcggtcatttgtatgaggcttttcacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgcttcctggttcactctttgcctttgattactcaggttatgatgctagccttagccctgtctggttcagggcattagaattggtcctcagggagatagggtatagtgaaggagcagtctcactcattgagggaatcaaccacacacaccatgtgtatcgtaataagacctattgtgtgcttgggggaatgccctcaggctgttcaggaacatccatcttcaactcaatgatcaacaacattattatcagagcactacttataaaaacattcaagggcatcgatttggatgagctcaacatggtcgcttatggagatgatgtgctcgccagctaccccttcccaattgattgcttggagttagcaaagactggcaaggagtatggtctaaccatgactcctgcagataagtctccttgctttaatgaagttaattgggataatgcgaccttcctcaagaggggctttttacccgatgaacagtttccatttttgatccaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagaccatgtgcggtccttgtgtctcctagcatggcacaatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccagtaggaagagcattggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcgaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ647171.1_Human_enterovirus_71_isolate_EV141_06_complete_genome
------------------ttaaaa--c-a-gct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c---ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaaccacttcggaaaacc-tagtagcaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggttgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctggttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaatcaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----ttacctt--------------gaaatctgtggcc-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcacaggtgtccacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacactaccattaattattacaaagactcctatgctgccacagcaggcaagcagagtctcaagcaagatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcacaattaactattggcaactccaccatcactacgcaagaagcggcaaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgccacagcagtggataaaccaacgcgcccagatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccggtcagggttctgtattcacgtgcaatgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgttattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttataagcagactcaacccggcgctgatggcttcgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtatgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacataaacgcactgccctttgattctgccctgaaccactgcaactttggcctgttagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaatttgcaggtcttaggcaagcagttacgcaagggtttcccactgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaactttcaccccaccccgtgtatccatatacctggtgaagttaggaacttactagagctatgccaggtggagaccattttggaggtcaacaa----------tgtacccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtattcagagccgaccctgggcgaaatggaccgtggcagtctaccctgttgggtcagttgtgcgggtactacactcagtggtcaggatcattggaagtcaccttcatgttcactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaagaccgggcgaccgccatgttgggcacgcacgtcatctgggactttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtatttgactactacaccacagggttggtcagtatatggtatcagacaaattatgtggttccaattggggcacccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcatcatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagacagtgtgagtagagccctcactcaagctctaccggca--------cccacaggtcagaacacacaggtgagcagtcatcgattggacacaggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccaccctcgatagcttcttcagcagagcgggattagttggagagatagatctccctcttgaaggtacaac-taacccaaatggttatgctaactgggacatagatataacaggttacgcgcaaatgcgcagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtccctcaattgctccaatatatgtttgtcccgcctggggcccccaagccagattccagggaatccctcgcatggcaaactgccaccaacccctcagtttttgttaagctgtcagaccccccagcacaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtaggaacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacggcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtccggggccatttacgtgggtaattttagagtggttaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctcccgcgatttgctcgtgtcatctaccaccgcccaaggttgtgacacgattgcccgttgcaattgccaaacaggggtgtactattgtaactcgatgagaaaacattacccagtcagtttctcgaagcccagcctgatctatgtagaggctagtgagtattacccagccagataccagtcacatctcatgctcgcacaaggtcactcagaacctggtgattgcggcggtatccttagatgccaacatggcgtcgtcggtatagtgtctactggcggcaatggtctcgttggctttgcagacgtcagggatctcttgtggttggatgaagaagctatggagcagggcgtgtccgattacatcaag-ggtctcggggatgctttcgggacaggcttcactgatgcagtctcgagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttactgcaaccttagctttgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcagaaacaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggctagagtgggtttccaacaagatcagcaaattcatcgattggcttaaggagaaaattgtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttacca-ctgctagagaaccagatctcaaatttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaacgtgtcgtatctagccca---------cttctgtcgcaagttccagccgctatacgccacagaagccaaaagagtttatgccctggagaagagaatgaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgatggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggcaaggatatgtctttgttctgtcaaatggtatccaccgtagatttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgttatcgcatctaccaatgccagtaacattatagtgccaacagtgtctgactctgacgctattcgccgcaggttctatatggattgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgggccgctaaactgtgctctgaaaacaacaccgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaactcagagatagaaaatctaaggttagatacagtgtggacacggtagtttcagaacttattagggaatataacaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaaactcccaccaatgtagagcggcaccttaatagagcggtacttgtcatgcaatccatcgccacagtagtggcggttgtctcgttagtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgttcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctgctgaggaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagcagtcctcccacggcactcacaacccggcaaaactatttgggttgagcacaaactcgtgaacatccttgatgcagttgaattggtggatgagcaaggagtcaacctggaactaaccctcatcactcttgacactaatgaaaagtttagggatatcaccaagttcatcccagaaaatatcagtactgccagtgatgccaccctagtgatcaacacggaacacatgccctcaatgtttgttccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttattggtattcacattggcggtaatggcaggcaaggtttttgcgcgggcctcaaaaggagttactttgccagtgaacaaggagagatccagtgggtcaagcccaataaagaaactggaagactcaacatcaatggaccgacccgcaccaagttagaacccagtgtgttccatgatgtcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgagcaggccctgttctctaagtatgtaggaaatacgctatatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattgaagcagctagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagatatcctagaccctaccaccagggatgtgagtaaaatgaaattctacatggataagtatgggcttgatctcccttactccacttatgtcaaggacgagctccgctcaattgataaaattaagaaagggaagtcccgtctgattgaggctagtagtttaaatgattcagtgtacctcagaatggctttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgattactcaggctatgatgctagccttagccctgtctggttcaaggcattagaattggtcctcagggagatagggtatagtgaaggagcagtctcactcattgagggaatcaaccacacacaccatgtgtatcgtaataagacctattgtgtgcttgggggaatgccctcaggctgttcaggaacatccattttcaactcaatgatcaacaacattattatcagagcgctgcttataaaaacatttaagggcattgatttggatgagctcaacatggtcgcttatggagatgacgtgctcgccagctaccccttcccaattgattgcttggagttagcaaagactggcaaggagtatggtctaaccatgactcctgcagataagtctccttgctttaatgaagttaattgggataatgcgaccttcctcaagaggggcttcttacccgatgaacagtttccatttttgatccaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagaccatgtgcggtccttgtgtctcctagcatggcacaatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccagtaggaagagcactggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcgaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaa---------------------------------------------------------------------------------------------------------------------------------------
>JX244184.1_Human_enterovirus_71_strain_SDLY48_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata---c---ccc---c---cccc-c------ag-t-gaaacttagaag--------------tagca-aaccac-gatcaa-cagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaattctgtgacc-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagataagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccattgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtgcagtgcaatgccagtaaattccatcagggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccactagactacgatcagggagcgacgccagtaatccctataactatcacattagctccaatgtgttctgaatttgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctgaagcctggcacaaatcaatttttaaccactgatgagggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaggttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacaaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcgg------ggaaaggtgagctgtgtgcagtgttcagagccgatcctgggcgaaacggaccgtggcagtccaccttgctgggtcagttgtgcgggtactacactcaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctggggttttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccattcagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagtagagcccttactcaagctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaagttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgatcgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgacagtttcttcagcagagcggggttagttggagagatagatctccctcttgaaggcacaac-taaccctaatggctatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattactccaatatatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgagtatggggcatgtcctaataacatgatgggtacgttctcggtgcggactgtagggacctccaagtccaaatatcctttagtgattaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccaaaactacctatttaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tctcggg------------------------------------------aaatttggacaacagtccggggccatttatgtgggtaactttagagtggtcaaccgtcatcttgccactcataatgattgggcaaatcttgtttgggaagacagctctcgcgacttactcgtttcatccaccactgctcaaggttgtgatacgattgcccgttgcaattgccagacaggggtgtactattgtaactcgaggagaaaacactacccggtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagctaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggtatagtgtctactggtggcaatgggctcgttggttttgcagatgtcagggacctcttgtggttggatgaagaggctatggagcagggcgtgtccgattacatcaag-ggtctcggagatgctttcgggacaggtttcactgatgcagtctcaagggaggttgaagcccttaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaaccttattaaattaatctctgcactggtgatcgtaatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaaattcaatgatatggccaacgctgctaaggggttagagtgggtttctaataagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctggagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaaattccagccgctatacgccatggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgcctcattgttaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgatggttacaagcaacaggtggttacagtgatggatgacttgtgccaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcctctcttgaggagaagggagtttccttcacctccaagtttgttatcgcatctactaatgccagtaacatcatagtgccaactgtgtctgattctgatgctattcgccgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtggaaaagctatccaacttagagatagaaagtctaaagttagatacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtctgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacatagagcggcacctcaatagagcggtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcaaggtgcgtattctggtgcccctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctcctgaggaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccattcacaacccggcaaaactatttggattgagcacaaactcgtgaatgtccttgatgcagttgaattggtagatgagcaaggagtcaacctggaattgaccctcatcactcttgacactaacgaaaaatttagggatatcaccaaattcatcccagaaaatattagtactgccagtgacgccaccctggtgattaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaacctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacttctgttgggaaggttatcggtattcacattggtggcaacggcagacaaggtttttgcgcaggtctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaaacccaataaagaaaccggaagactcaacatcaatggaccaacccgcaccaagttagaacccagtgtattccacgatatcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgaacaggccctgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaggaggcagctcttcattatgcaaaccaattgaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcatactagtgcaggttatccctatagtgccctggggataaagaaaagagacatcctagaccctactaccagggacgtgagtaaaatgaagctctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggatgagctgcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggccagtagtttgaatgattcagtgtacctcagaatggcttttggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaacccagacacattctggagcaaactgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggtccttagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaaccacacacaccatgtgtatcgcaataagacctattgcgtgcttggtgggatgccctcaggttgctcaggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcctatggagacgatgtgctcgctagctaccccttcccaattgattgcttggagttagcaaagaccggcaaggagtatggtctgaccatgactcctgcagacaaatctccttgctttaatgaagttaattggggtaatgcgaccttccttaagaggggctttttacccgatgaacagtttccatttttgatccaccctactatgccaatgagggagatccatgaatctattcggtggaccaaggacgcacgaaacactcaagaccatgtgcggtccctgtgcctcctagcatggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgttccagtaggaagagcgttggctatcccaaattatgaaaaccttagacgcaattggctcgagttattct-----agaggctgtac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ606447.1_Human_enterovirus_71_strain_BJ08-Z004-3_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttaca---c---ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aatcac-gatcag-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgtcatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------gggacaa-cccatggggcgctctaattcggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgtaacagagcaattgtt-----tacctg----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcctgaccctcaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcatgaaaactcaaactcagccactg-agggttccaccattaactacaccaccattaattattacaaagactcctatgctgccacagcgggcaaacagagtctcaagcaagatccagacaagtttgcaaatcctgttaaagacatcttcactgagatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgaccgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtattggaagttcccagatgtgctaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgttattgggacagtggcaggcggcacagggacag------aagacagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcagcacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcattgccttttgattctgccttgaaccactgcaactttggcctattagtagtacctattagcccactagattacgatcaaggagcgacaccagtaatccctataactatcacattagctccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcggcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaagtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagttgtgtgctgtgttcagagctgatcctgggcgaaatgggccgtggcagtccaccttgctgggtcagttgtgcgggtactatacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgactgccatgctgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactactacaccacagggttggtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcaagctctaccagca--------cccacaggccaaaacacacaggtgagtagtcatcgattggatacaggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattggttggagaaatagatctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctatttacctatatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagagaatccctcgcatggcaaaccgctaccaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtgccattcatgtcacctgcgagcgcttaccaatggttttatgacggatatcccacgtttggagaacataaacaggagaaagatcttgagtatggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccaaaactatctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcagcagtctggggccatttatgtgggtaactttagagtggtcaatcgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagttctcgcgatttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaactgccagacaggggtgtattattgtaactcgaggagaaaacactatccagttagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagctaggtaccagtcacatctcatgctcgcacagggccactcagaacctggtgattgcggtggcatccttagatgccaacatggcgtcgtcggtatagtgtctactggtggcaatgggcttgttggctttggagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggactcggagatgctttcgggacaggcttcactgatgcagtctcaagggaggttgaagctctcaagagctatcttatagggtctgaaggagcagttgagaaaattctgaaaaaccttattaaactaatctctgcactggtaattgtaatcagaagtgactacgacatggttacccttaccgcaaccttagcgctgataggttgtcatggcagtccttgggcttggattaaggccaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaaattcaatgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagcaaatttattgattggctcaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccagccgctatacgccacagaagctaaaagagtctatgccctggagaagagaatgaataattatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgatggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcatcccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgttatcgcatctactaatgccagtaacatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagactagatgcagggagagccgctaaactgtgctctgaaaacaacactgcaaattttaaacgttgcagcccattagtgtgtggaaaagctatccaacttagagatagaaagtctaaagttagatacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccgcccaagttcaggccaattaggatt---agccttgaagagaaaccagccccagacgccattagcgatctccttgctagcgtagatagtgaagaagtgcgccagtattgc-agggatcaaggttggatcattcctgaaactcccaccaacgttgagcggcaccttaatagagcagtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaagcctgctcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctcctgaggaggaacatcaggcaagtccaaacagaccaagggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtagatgagcaaggagtcaacctggaattaaccctcatcactcttgacactaacgaaaaatttagggatatcaccaaattcatcccagaaaatattagtactgccagtgacgccaccctagtgatcaacacggaacacatgccctcaatgtttgtcccggtgggtgatgttgtgcagtatggcttcttgaacctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacttctgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggccttaaaaggagttactttgctagtgaacaaggagagatccagtggattaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacccagtgtattccacgatatcttcgagggaaatagagaaccagctgtcttgcacagtaaggacccccgactcgaggtagattttgaacaggccttgttctctaagtatgtgggaaatacactacatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggcactgagaatcttgaggctattgatcttcatactagtgcaggttatccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggatgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggatgagctgcgctcaattgataagattaagaaagggaagtcccgtctgatcgaagccagtagtttaaatgattcagtgtacctcagaatggctttcggtcatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaaactgccaattttgctccctggttcactcttcgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattggaattggtccttagggagatagggtatagtgaagaggcagtctcactcattgagggaatcaaccacacacaccatgtgtatcgtaacaagacctattgtgtacttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcctggaactagcaaagactggtaaggagtatggtctgaccatgactcctgctgataaatctccttgctttaatgaggtcaattggggtaatgcgaccttcctcaaaaggggctttttgcccgatgaacagtttccatttttgattcaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcattggctatcccaaattatgaaaaccttagacgtaattggctcgagttatttt-----agaggctgtac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>GQ994992.1_Human_enterovirus_71_strain_Henan2-09-China_complete_genome
---------------------------aa-gct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata-------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aatcac-ggtcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-cagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacgcgcccacaaacca-gtggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatactggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgcgacc-acccttaactatatcttaaccctcaacacagctaaa-----catgggctcgcaggtgtccacacagcgctccggctctcatgagaactcaaactcagccactg-agggttccaccataaactacaccaccattaattattacaaagactcctatgctgccacggcaggcaaacagagtctcaagcaagatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactaaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgatgatacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggatactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcagcacccgtacgtgcttgatgctggtatcccaatatcacagttaacagtgtgcccacaccagtggattaatttaaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccactgtaactttggcctactagttgtgcctattagcccactagattacgatcaaggagcgacgccagtaatccctataactatcacattagccccaatgtgttccgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacccattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaatttgctagagttgtgccaggtggagaccattttggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatggaccgtggcagtccaccttgctgggccagttgtgcgggtattacacccaatggtcaggatcattggaagtcaccttcatgtttactggatcctttatggctaccggcaagatgcttatagcatatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctacaatcgtctgtcacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggagcgcccaatacagcctatataatagcattagcagcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagcccttactcaggctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgattggatacaggtaaggttccagcacttcaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttaaaggcacaac-taacccaaatggttatgccaactgggacatagatataacgggctatgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgtagcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatcccttgcatggcaaaccgctactaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtgccattcatgtcacctgcgagtgcttaccaatggttttatgatggatatcccacattcggagagcacaaacaggagaaagatcttgagtatggagcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccaaaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggccatttatgtgggtaactttagagtggtcaatcgtcaccttgccactcacaatgattgggcaaatctagtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactattgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattatccagccaggtaccagtcacatctcatgctcgcacagggccactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggtatagtgtctactggtggtaatgggctcgttggcttcgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagacgctttcgggacaggcttcactgatgcggtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagtagagaaaattctaaaaaatcttattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggtagtccttgggcttggatcaaagccaaaacagcttctattttaggtatccctattgctcaaaagcaaagtgcttcctggctcaagaagttcaacgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctgaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccagccgctatacgccacggaagctaaaagagtctatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccgggcactgggaagtccctagccactggtatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcacttccaccagacccagatcattttgatggttacaaacagcaagtggtcacagtgatggatgatttgtgtcaaaaccccgacggcaaggacatgtctttattctgtcaaatggtgtccaccgtagacttcattccaccaatggcttctcttgaggaaaagggagtttccttcacctctaagtttgttatcgcatctactaatgccagcaacatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctacatggattgtgacattgaagtgacagactcgtacaagacagatctaggtaggctggatgcagggcgagctgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagttagatacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggcccacccaagtttaggccaattaggatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtggtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgcccctaagcaagtgcttaagaaacctactcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctcctgaggaggaacgtcaggcaagtccaaacagatcaggggcatttcaccatgttgggtgttagggatcgcctagcagtcctcccacgccactcacaacccggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtagatgagcaaggagtcaacctggaattaaccctcatcactcttgacactaacgaaaagtttagggatatcaccaagttcattccagaaaacattagtactgccagtgatgccaccctggtgatcaacacggagcacatgccttcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaacctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacttccgttgggaaggttatcggtattcacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggggagatccagtgggttaagcctaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtattccatgatatcttcgagggaaataaggaaccagctgttttgcacagtaaggacccccgactcgaggtagattttgaacaggccctgttctctaaatatgtgggaaatgcactacatgagcctgacgagtacattaaagaggcagctcttcattatgcaaaccaattaaagcaactagaaattaatacctctcaaatgagcatggaggaagcctgctacggtactgagaatcttgaggctattgatcttcatactagtgctggttacccctatagtgccctgggaataaagaagagagacatcttggaccctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagctgcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggccagtagtttaaatgattcagtgtacctcagaatggctttcggtcatttgtatgagactttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaaattgccagttttgctccctggttcactctttgccttcgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattagtccttagggagatagggtatagtgaagagacagtctcacttattgagggaatcaaccacacacaccatgtgtatcgtaataagacctattgtgtgcttggtggaatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagacgatgtgctcgctagctaccccttcccaattgattgcttggaattagcaaagactggcaaggagtacggtctgaccatgactccagcagataagtctccttgctttaatgaagttaactggggtaatgcgaccttcctcaagaggggctttttacccgatgaacagtttccatttttgatccaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcgcgaaacacacaagaccatgtgcggtccttgtgcctcctagcatggcataatggtaagcaggaatatgagaagtttgtgagcacaattaggtctgtcccagtaggaagagcgttggctatcccaaattatgaaaaccttagacgcaattggctcgagttatttt-----agaggctacac-------------------------acgc---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taccc-g-a-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>GQ994989.1_Human_enterovirus_71_strain_Chongqing1-09-China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-accccctcaca-gggccccc-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagcagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgtaacagagcaattgtc-----taccta----tttatt-ggtttcgtaccat-----taacctt--------------gaagtctgtgact-acccttaattatatcttgactctcaatacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttcccacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcttatgctgccacagcaggtaaacagagtctcaagcaagatccagacaagtttgcaaatcctgttaaagacatctttactgaaatggcagcaccactgaaatccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaattccaccatcaccacgcaagaagcagctaacatcatagttggttatggcgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggttggtactggaagttcccggatgtgttaactgaaactggggtttttgggcagaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagcaaattccaccaaggagcactcctagttgctgtcctgccagagtacgtcattgggacagtggcgggcggtacagggacgg------aagacagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtacttgatgctggcatcccgatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactaccttttgactctgctttgaaccactgtaacttcggcctattagttgtgcccatcagcccgctagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaagcagtcacgcaagggtttcccaccgagctgaaacctggcacaaatcaatttttgaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccatatacctggtgaagttaggaacttgctagagttatgtcaggtggagaccattttagaggtcaacaa----------tgtgcccacgaatgccactagctta------atggagaggctgcgctttccggtctcagcacaagcag------ggaaaggcgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtccaccttgctgggtcagctgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggccaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggactttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactactacaccacagggttagttagtatatggtaccagacaaattacgtggttccaattggggcgcccaatacagcctacataatagcactagcggcagctcaaaagaacttcaccatgaagttgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagccctcacccaagctctaccagca--------cccacaggccagaacacacaagtgagcagtcatcgtctggatacaggtaaggtcccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggggagatagatctccctcttaaaggtacaac-taacccaaatggttatgctaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcatgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcatggcaaactgccaccaacccctcagtttttgtcaagctgtcagaccctccagcacaagtttcagtaccatttatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggggaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaatatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttaggatatacatgagaatgaagcacgtcagggcatggatacctcgcccgatgcgcaaccagaattacctgttcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttgga------------------------------------------aaatttgggcaacagtctggggccatatatgtgggtagctttagagtggtcaatcgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagttctcgcgatttgctcgtgtcatccaccaccgcccaaggttgtgacactattgcccgttgcaattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagtgagtactatccagctaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgtcaacatggcgtcgtcggtatagtgtctactggtggcaatgggctcgttggctttgcagatgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacattaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtctcaagggaggttgaagctctcaaaaactatcttataggatccgaaggagcagttgagaaagttttaaaaaatcttattaaactaatctctgcactggtgattgtaatcaggagtgattacgacatggtcacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggattaaagccaaaacagcttccatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaaattcaatgacatggccaacgctgctaaggggttagagtgggtttccaataaaatcagcaaattcattgattggcttaaggagaaaatagtaccagcagccaaggagaaagttgaattcctgaacaacttgaaacagttgcca-ttgctagaaaatcagatctcaaacttggaacaatctgccgcttcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccagccgctatacgccacggaagccaaaagagtttatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattgttaggggctcaccaggcactgggaagtctctagccacaggtatcatcgctcgagcaatcgccgataagtaccactccagcgtgtactcgcttccaccagacccagatcatttcgatggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggcaaggatatgtctctattctgtcaaatggtgtccaccgtagacttcatcccaccaatggcttctcttgaggagaagggagtctccttcacctctaagtttgttatcgcatctactaatgccagtaacatcatagtgccaacagtgtctgactctgacgctattcgccgcaggttctacatggattgtgacattgaggtgacagattcgtacaaaacagatctaggtagactggatgcagggcgagccgccaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagggataggaagtctaaagttagatacagtgtggatacggtagtttcagaacttattagggagtacagcaacagatccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaatcaggatt---agccttgaagagaaaccagctccagatgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccaatactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcagtgcttgtcatgcaatccatcgccacaatagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaggcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagtcttgattttgccctctccctgttgaggaggaacgttaggcaagtccaaacagatcaggggcattttaccatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttggattgagcacaaactcgtgaatatccttgatgcagttgaattggtggatgagcaaggagtcaacttggagttaaccctcatcactcttgacacgaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttatcccggtgggtgatgttgtacagtatggcttcttgaatcttagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggtcagtgtggaggagtggtgacatctgttgggaaggttatcggcatccacattggtggcaatggtagacaaggtttttgcgcaggcctcaaaagaagttattttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacccagtgtattccatgatgtcttcgagggaaataaggaaccagctgttttgcacggcaaagatccccgactcgaggtagaatttgagcaggccctgttctctaaatatgtgggaaacacactatatgaacctgacgagtacatcaaagaggcagcccttcattatgcaaatcagttaaagcaactagaaattaatacttctcaaatgagcatggaggaggcttgctacggtactgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaagagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggccttgatctcccttactccacttatgttaaggatgagctgcgctcaattgataaaatcaagaaagggaagtcccgtctgattgaggccagtagtttaaatgattcagtgtacctcagaatgacttttggtcacttgtatgagactttccacgcgaatcctgggacgataactggatcagccgtggggtgcaaccctgacacattctggagtaagctgccaatcttactccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagagcattagaattggtccttagggagatagggtatagtgaaggagcaatctcactcattgagggaatcaaccacacacaccatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacgtccattttcaactcaatgattaacaacattattatcagggcactgctcataaaaacatttaagggcattgatctggatgaactcaacatggtcgcttatggagatgatgtgctcgctagttaccccttcccaattgattgtttggagttagcaaagactggtaaggagtatggtctaaccatgactcctgcagataagtctccttgcttcaatgaagtcaattggggtaacgcgaccttcctcaagaggggctttttacccgatgaacagtttccatttttgatccaccccactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagatcatgtacgatccttgtgccttctagcgtggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccagtaggaagagcattggctatcccaaattatgaaaatcttagacgcaattggctcgagttgtttt-----agaggctacac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-a-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaa-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY465356.1_Human_enterovirus_71_strain_SHZH03_complete_genome
------------------ttaaaa--cag--ct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttgta---c--cccc---c---cccc-c------ag-t-gaaacttagaag--------------caata-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttacccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgct-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatatggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaatcaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgcaccat-----taacctt--------------gaagtctgtgacc-acccttaattatatcctgaccctcaacacagctaaa-----catgggttcacaggtatctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactatactaccattaattattacaaagactcctatgctgccacagcaggcaagcagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacattttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagttgcgcaattaactattggcaactccggcatcgccatggcggccgcggcgaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccagatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacagttccactatctctatcggtcagggttctgtattcacgtgcaatgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaactgcaacacccgtacgtgcttgatgctggcattccaatatcacagctaacagtatgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacataaacgcactgccctttgattctgccttgaaccactgtaattttggtctgttagttgtgcccatcagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaatttgcaggtcttaggcaagcagttacacaagggtttcccactgagctgaagcctggcacaaatcaatttttgaccactgatgatggcgtttcagcacctattctaccaaattttcaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagctatgccaggttgagaccattttggaggtcaataa----------tgtacccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtctaccttgttgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggccctctgcccaaggaccgggcgacagccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaattccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactactacactacagggttggtcagcatatggtatcagacaaattatgtggttccaattggggcacccaacacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaagttatgcaaggatgctagtgacatcctgcagacgggcaccatccagggagatagg--------gtagcagatgtaattg---aaagttccat--------------------------aggtgacagtgtgagcagagccctcactcaagctctaccggca--------cccacaggtcagaacacacaggtgagcagtcatcgattggacacaggtaaggttccagcactccaagctgctgaaattggggcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactctcgatagtttcttcagcagagcgggattagttggagagatagacctccctcttgaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctatatgcgctttgatgcagagttcacctttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggggcccccaagccagattccagggaatccctcgcatggcaaactgctaccaacccctcagtttttgttaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtaggaacctccaaatccaagtaccctttggtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctattcaaagccaatccaaattatgctggcaa----ctccattaagccaactggtgctagtcgtacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtccggggccatttatgtgggtaactttagagtggttaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttactcgtgtcatctaccaccgcccaaggttgtgatacgattgcccgttgcaattgccagacaggggtgtattattgtaattcgaggagaaaacactacccagtcagtttttcgaaacccagcctgatccatgtagaggctagcgagtattacccagccagataccagtcacatctcatgctcgcacaaggtcactcagaacctggtgattgtggcggaatccttagatgccaacacggcgtcgtcggcatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggatctcttgtggttggatgaagaagctatggagcagggtgtgtccgattacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtctcgagggaagttgaagctctcaagaattatcttatagggtctgaaggagcagttgagaaaattttaaaaaaccttattaaactaatctctgcactagtgattgtaatcagaagtgattacgacatggttaccctcacagcaaccttagctctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggctagagtgggtttccaacaagatcagcaaattcatggattggcttaaggagaaaattataccagcagccaaggagaaggttgaattcctaaacaacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcgcaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctatatgccacagaagctaaaagagtttatgccctggagaaaagaatgaataattacatgcagttcaagagcaagcaccgaattgaacctgtatgtcttattattaggggctcaccaggcactgggaagtctctagccactggcatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcacttccaccagacccagaccattttgatggatacaaacaacaggtggttacagtaatggatgacttgtgtcaaaaccctgatggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacatctaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtgtccgactctgacgctattcgccgcagattctacatggattgtgacattgaagtgacagactcatacaagacagatctaggcagactggatgctgggcgggccgccaaactgtgctctgaaaacaacaccgcaaatttcaaacgctgcagcccattagtgtgtgggaaagctatccagctcagagatagaaaatctaaggttagatatagtgtggatacggtagtttcagagcttattagggaatacaataataggtccgccattggcaacacaatcgaggctctattccaaggcccacccaagttcaggccaattagaatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcatccctgaaactcccaccaacgtggaacggcaccttaatagagcagtgcttgtcttgcaatccatcgccacagtagtggcggttgtatcgctagtgtatgtcatctacaagctattcgcagggtttcagggtgcgtattccggtgctcctaggcaagtgcttaagaaacctgttcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctgctgaggaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagcagtccttccacgtcactcacaacccggcaaaactatttgggttgagcacaaactcgtgaacatcctcgatgcagttgaattggtggatgagcaaggagtcaacctggaactaacccttatcactcttgatactaatgaaaagttcagggatatcaccaaattcatcccagaaaatatcagtactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgttccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaatttccctactaaagctggacagtgtggaggagtggtgacatctgttgggaaggttattggtattcacattggtggtaatggcagacaaggcttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagagactggaagactcaacatcaatggaccaacccgcaccaaattagagcccagtgtgttccatgatgtcttcgagggaaacaaggaaccagctgtcttgcatagtaaagacccccgactcgaggtagattttgagcaagcccttttctctaagtatgtaggaaatacactatacgagcctgacgagtacatcaaaggagcagcccttcattatgcaaatcaattgaagcagctaggaattaatacctctcaaatgagtatggaggaggcctgctacggtaccgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagatatcctagaccctaccaccagggatgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagcttcgctcaattgataaaattaagaaagggaagtcccgcctgattgaggctagtagtttaaatgattcagtgtacctcagaatggctttcggtcatttgtatgaggttttccatgcaaatcctgggacgataactggatcagccgtggggtgtaaccccgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagtcttagccctgtctggttcagggcattagaattggtccttagggagatagggtatagtgaaggagcggtctcactcattgagggaattaaccacacacaccatgtgtatcgtaataagacctattgtgtgcttggtggaatgccctcaggctgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgagctcaacatggtcgcttatggagatgatgtgctcgccagctaccccttcccaattgattgcttggagttagcaaagactggtaaggagtatggtctaaccatgactcccgcagacaagtctccttgctttaatgaagttaattgggataatgcgaccttcctcaagaggggctttttacccgatgaacagtttccatttttgatccaccctactatgtcaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagaccatgtgcggtccttgtgcctcctggcatggcacagtggtaaccaagaatatgagaaatttgtgagcacaattcggtctgtcccagtaggaagagcattggctattccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcgaccc-caccggaa----atctggt------c-g-----tgaatatcg-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF312457.1_Enterovirus_A71_strain_SHZH98_pro_complete_genome
------------------ttaaaa--cag--ct-gtgggttg-t-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c---ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgtaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaagtctgtgacc-acccttaattatatcttgaccctcaacacagcaaaa-----catgggttcacaggtgtccacacagcgctccggttctcacgaaaattcaaactcagccactg-agggttccaccataaactacactaccattaattactataaagactcctatgctgccacagcaggcaagcagagtctcaagcaggatccagacaaatttgcaaatcctgttaaagacattttcactgaaatggcagcaccactgaagtccccatccgctgaggcatgtggatacagcgatcgagtggcgcaattaactattggcaactccaccatcaccacacaagaagcggcaaacatcatagtcggctatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccgacgcgcccggatgtttcggtgaataggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctatcgatcagggttctgtatccacgtgcaatgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacaggaacgg------aagacagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccatacataaacgcactgccctttgattctgccttgaaccactgtaactttggcctgttagttgtgcctattagcccactagattacgaccaaggagcaacgccagtgatccctataactatcacattggctccaatgtgttctgaatttgcaggtcttaggcaagcagttacgcaagggtttcccactgagttgaaacctggcacaaaccaatttttaaccactgacgacggcgtttcagcacccattctaccaaactttcaccccaccccgtgtatccatatacctggtgaagttaggaatttgctagagctatgccaggtggagaccattttggaggtcaacaa----------tgtacccacgaatgccactagcttg------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtctaccttattaggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgttcactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggtcctttgcccaaggaccgggcgaccgccatgttgggaacgcacgtcatctgggattttgggctgcagtcgtctgttacccttgtaataccatggatcagcaacactcactacagagcacatgcccgagatggagtatttgactactacaccacagggttggtcagcatatggtatcagacaaattatgtggttccaattggggcacccaatacagcctatataatagcactagcggcagcccaaaagaatttcactatgaagttgtgtaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---agagttccat--------------------------aggtgacagcgtgagcagagccctcactcaagctctaccggca--------cccacaggccagaacacacaggtgagcagtcaccgattggacactggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacgctgtgtccttaattcgcacagcacagctgagaccactctcgatagtttcttcagcagagcggggttagttggagagatagacctccctcttaaaggcacaac-taacccaaatggttatgctaactgggatatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacccaccggggaggttgtcccacaattgctccaatatatgtttgtaccacctggggcccccaagccagattccagggaatccctcgcatggcaaactgccactaacccctcagtttttgttaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgatggatatcctacattcggtgaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggtacattctcagtgcggaccgtaggaacctccaagtccaagtaccctttagtggttaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgcaaccaaaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcgcagcgat---caccac---------------------------------------tctcggg------------------------------------------aaatttgggcaacagtccggggccatttacgtgggtaattttagagtggttaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggagaacagctctcgcgacttgctcgtgtcatctaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtattattgtaattcaaggagaaaacactacccagtcagtttctcaaaacccagcctaatctacgtagaggctagcgagtactacccagccagataccagtcacatctcatgctcgcacaaggtcactcagaacctggtgattgtggcggtatccttagatgccaacatggtgtcgtcggtatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggatctcctgtggttggatgaagaagctatggagcagggcgtgtccgattacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtctcgagggaggttgaagctctcaagaactatcttataggatctgaaggagcagttgagaaaattttaaaaaatctcattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttacagcaaccttagctctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaattcattgattggcttaaggagaaaattataccagcagccaaggagaaggttgaattcctaaacaacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaggtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctatatgccacagaagctaaaagagtttatgccctggagaaaagaatgaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgtcttattattaggggctcaccaggcactgggaagtctctagccactggcatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcacttccaccagacccagaccattttgatggatacaaacaacaggtggttacagtaatggatgacttgtgtcaaaaccctgatggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacatctaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtgtccgactctgacgctattcgccgcagattctacatggattgtgacattgaagtgacagactcatacaaaacagatctaggcagactggatgctgggcgggccgccaaactgtgctctgaaaacaacaccgcaaatttcaaacgctgcagcccattagtgtgtgggaaagctatccagatcagagatagaaaatctaaggttagatatagtgtggatacggtagtttcagagcttattagggaatacaataataggtccgccattggcaacacaatcgaggctctattccaaggcccacccaagttcaggccaattagaatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcatccctgaaactcccaccaacgtggaacggcaccttaatagagcagtgcttgtcttgcaatccatcgccacagtagtggcggttgtatcgctagtgtatgtcatctacaagctctttgcagggtttcaaggtgcgtattctggtgctcctaagcaagtacttaagaaacctgctcttcgcacagcaacagtgcagggtccgagccttgattttgctctctccttgctgaggaggaacatcaggcaagtccaaacagaccagggccatttcactatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttgggttgagcacaaactcgtgaacatccttgatgcggttgaattggtggatgagcaaggagtcaacctggaactaacccttatcactcttgacactaatgaaaagtttagggatatcaccaaatttatcccagaaaatatcagcaccgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtaccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcgggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggcggtaatggcagacaaggtttttgcgcaggtcttaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaacaaagagactggaagactcagcatcaatgggccaacccgcaccaagctagagcccagtgtgttccatgatgtcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgcctcgaggtagactttgagcaggccttgttctctaagtatgtaggaaatacactatatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaatcaattgaagcagctagaaattaatacctctcaaatgagtatggaggaggcctgctacggtactgagaaccttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcctagaccctaccaccagagatgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagcttcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggctagtagtctaaatgattcagtgtaccttagaatggctttcggtcatttgtatgagactttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagttgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagggcgttagaattggtccttagggagatagggtatagtgagggagcaatctcactcattgagggaatcaatcacacacaccatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcagggtgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactactcataaaaacatttaagggcattgatttggatgagctcaacatggtcgcctatggagatgatgtcctcgccagctaccccttcccaattgattgcttggagttagcaaagacaggcaaggagtatggtctaaccatgactcctgcagataagtctccttgctttaatgaggttaattgggataatgcaaccttcctcaagaggggctttttacccgatgagcagtttccatttttgatccaccctaccatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagaccatgtgcggtccttgtgtctcctagcatggcacaatggtaagcaagaatatgaaaaatttgtgagcacaatcaggtctgtcccagtaggaagagcattggctattccaaattatgaaaatctcagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcgaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ694983.1_Human_enterovirus_71_strain_BZ200805_polyprotein_gene_complete_cds
-------------------taaaa--caagcct-gtgggttg-c-accccatccca-gggccccc-t-gggggcaagccctttggtaccttggtacctttgtgcgcct-g-ttttata---c---ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-agccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgtaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacttt--------------gaagtctgtgacc-acccttaattatatcttgaccctcaacacagcaaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaattcaaactcagccactg-agggttccaccataaactacactaccattaattactataaagactcctatgctgccacagcaggcaagcagagtctcaagcaggatccagacaaatttgcaaatcctgttaaagacattttcactgaaatggcagcaccactgaagtccccatccgctgaggcatgtggatacagcgatcgagtggcgcaattaactattggcaactccaccatcaccacacaagaagcggcaaacatcatagtcggctatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccgacgcgcccggatgtttcggtgaataggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctatcgatcagggttctgtatccacgtgcaatgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacaggaacgg------aagacagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccatacataaacgcactgccctttgattctgccttgaaccactgtaactttggcctgttagttgtgcctattagcccactagattacgaccaaggagcaacgccagtgatccctataactatcacattggctccaatgtgttctgaatttgcaggtcttaggcaagcagttacgcaagggtttcccactgagttgaaacctggcacaaaccaatttttaaccactgacgacggcgtttcagcacccattctaccaaactttcaccccaccccgtgtatccatatacctggtgaagttaggaatttgctagagctatgccaggtggagaccattttggaggtcaacaa----------tgtacccacgaatgccactagcttg------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtctaccttattaggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgttcactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggtcctttgcccaaggaccgggcgaccgccatgttgggaacgcacgtcatctgggattttgggctgcagtcgtctgttacccttgtaataccatggatcagcaacactcactacagagcacatgcccgagatggagtatttgactactacaccacagggttggtcagcatatggtatcagacaaattatgtggttccaattggggcacccaatacagcctatataatagcactagcggcagcccaaaagaatttcactatgaagttgtgtaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---agagttccat--------------------------aggtgacagcgtgagcagagccctcactcaagctctaccggca--------cccacaggccagaacacacaggtgagcagtcaccgattggacactggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacgctgtgtccttaattcgcacagcacagctgagaccactctcgatagtttcttcagcagagcggggttagttggagagatagacctccctcttgaaggcacaac-taacccaaatggttatgctaactgggatatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacccaccgggcaggttgtcccacaattgctccaatatatgtttgtaccacctggggcccccaagccagattccagggaatccctcgcatggcaaactgccactaacccctcagtttttgttaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgatggatatcctacattcggtgaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggtacattctcagtgcggaccgtaggaacctccaagtccaagtaccctttagtggttaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgcaaccaaaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcgcagcgat---caccac---------------------------------------tctcggg------------------------------------------aaattttggcaacagtccggggccatttacgtgggtaattttagagtggttaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggagaacagctctcgcgacttgctcgtgtcatctaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtattattgtaattcaaggagaaaacactacccagtcagtttctcaaaacccagcctaatctacgtagaggctagcgagtactacccagccagataccagtcacatctcatgctcgcacaaggtcactcagaacctggtgattgtggcggtatccttagatgccaacatggtgtcgtcggtatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggatctcctgtggttggatgaagaagctatggagcagggcgtgtccgattacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtctcgagggaggttgaagctctcaagaactatcttataggatctgaaggagcagttgagaaaattttaaaaaatctcattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttacagcaaccttagctctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaattcattgattggcttaaggagaaaattataccagcagccaaggagaaggttgaattcctaaacaacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaggtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctatatgccacagaagctaaaagagtttatgccctggagaaaagaatgaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgtcttattattaggggctcaccaggcactgggaagtctctagccactggcatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcacttccaccagacccagaccattttgatggatacaaacaacaggtggttacagtaatggatgacttgtgtcaaaaccctgatggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacatctaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtgtccgactctgacgcttttcgccgcagattctacatggattgtgacattgaagtgacagactcatacaaaacagatctaggcagactggatgctgggcgggccgccaaactgtgctctgaaaacaacaccgcaaatttcaaacgctgcagcccattagtgtgtgggaaagctatccagctcagagatagaaaatctaaggttagatatagtgtggatacggtagtttcagagcttattagggaatacaataataggtccgccattggcaacacaatcgaggctctattccaaggcccacccaagttcaggccaattagaatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcatccctgaaactcccaccaacgtggaacggcaccttaatagagcagtgcttgtcttgcaatccatcgccacagtagtggcggttgtatcgctagtgtatgtcatctacaagctctttgcagggtttcaaggtgcgtattctggtgctcctaagcaagtacttaagaaacctgctcttcgcacagcaacagtgcagggtccgagccttgattttgctctctccttgctgaggaggaacatcaggcaagtccaaacagaccagggccatttcactatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttgggttgagcacaaactcgtgaacatccttgatgcggttgaattggtggatgagcaaggagtcaacctggaactaacccttatcactcttgacactaatgaaaagtttagggatatcaccaaatttatcccagaaaatatcagcaccgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtaccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcgggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggcggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaacaaagagactggaagactcagcatcaatgggccaacccgcaccaagctagagcccagtgtgttccatgatgtcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgcctcgaggtagactttgagcaggccttgttctctaagtatgtaggaaatacactatatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaatcaattgaagcagctagaaattaatacctctcaaatgagtatggaggaggcctgctacggtactgagaaccttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcctagaccctaccaccagagatgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagcttcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggctagtagtctaaatgattcagtgtaccttagaatggctttcggtcatttgtatgagactttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagttgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagggcgttagaattggtccttagggagatagggtatagtgagggagcaatctcactcattgagggaatcaatcacacacaccatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcagggtgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactactcataaaaacatttaagggcattgatttggatgagctcaacatggtcgcctatggagatgatgtcctcgccagctaccccttcccaattgattgcttggaactagcaaagacaggcaaggagtatggtctaaccatgactcctgcagataagtctccttgctttaatgaggttaattgggataatgcaaccttcctcaagaggggctttttacccgatgagcagtttccatttttgatccaccctaccatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagaccatgtgcggtccttgtgtctcctagcatggcacaatggtaagcaagaatatgaaaaatttgtgagcacaatcaggtctgtcccagtaggaagagcattggctattccaaattatgaaaatctcagacgcaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcgaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-tacac-a-a-aaaaaacacaaa-----------------------------------------------------------------------------aaagtaaaccctggga------------------ccaaaat-------------------------------------------------------------gcacct----------ttttgtgtgga---tttggg---
>HQ188292.1_Human_enterovirus_71_strain_Fuyang-0805a_complete_genome
---------------cttttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggcacctcggtacctttgtgcgcct-g-ttttata---c---ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaaytcaaactcagccactg-agggttcyaccataaactacacyaccattaattactayaaagactcctatgctgccacagcaggcaarcagagtctcaagcaggatccagacaartttgcaaatcctgttaaagacatyttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagygatcgagtggcgcaattaactattggcaactccaccatcaccacrcaagaagcggcwaayatcatagtcggytatggtgagtggccttcctactgctcrgattctgacgctacagcagtggataaaccracgcgcccggatgtttcggtgaataggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctatcgatcagggttctgtatccacgtgcaatgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacaggaacgg------aagacagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccatacataaacgcactgccctttgattctgccttgaaccactgtaactttggcctgttagttgtgcctattagcccactagattacgaccaaggagcaacgccagtgatccctataactatcacattggctccaatgtgttctgaatttgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaaccaatttttaaccactgacgacggcgtttcagcacccattctaccaaactttcaccccaccccgtgtatccatatacctggtgaagttaggaatttgctagagctatgccaggtggagaccattttggaggtcaacaa----------tgtacccacgaatgccactagcttg------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtctaccttattaggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggtcctttgcccaaggaccgggcgaccgccatgttgggaacgcacgtcatctgggattttgggctgcagtcgtctgttacccttgtaataccatggatcagcaacactcactacagagcacatgcccgagatggagtatttgactactacaccacagggttggtcagtatatggtatcagacaaattatgtggttccaattggggcacccaatacagcctatataatagcactagcggcagcccaaaagaatttcactatgaagttgtgtaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggtgacagcgtgagcagagccctcactcaagctctaccggca--------cccacaggccagaacacacaggtgagcagtcaccgattggacactggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacgctgtgtccttaattcgcacagcacagctgagaccactctcgatagtttcttcagcagggcgggattagttggagagatagacctccctcttgaaggcacaac-taacccaaatggttatgctaactgggatatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacccaccgggcaggttgtcccacaattgctccaatatatgtttgtaccacctggggcccccaagccagattccagggaatccctcgcatggcaaactgccactaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgatggatatcctacattcggtgaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggtacattctcagtgcggaccgtaggaacctccaagtccaagtaccctttagtggttaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgcaaccaaaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcgcagcgat---caccac---------------------------------------tctcggg------------------------------------------aaatttgggcaacagtccggggccatttacgtgggtaattttagagtggttaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggagaacagctctcgcgacttgctcgtgtcatctaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtattattgtaattcaaggagaaaacactacccagtcagtttctcaaaacccagcctaatctacgtagaggctagcgagtactacccagccagataccagtcacatctcatgctcgcacaaggtcactcagaacctggtgattgtggcggtatccttagatgccaacatggtgtcgtcggtatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggatctcctgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtctcgagggaggttgaagctctcaagaactatcttataggatctgaaggagcagttgagaaaattttaaaaaatctcattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttacagcaaccttagctctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaacaagatcagcaaattcattgattggcttaaggagaaaattataccagcagccaaggagaaggttgaattcctaaacaacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaggtcatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatacgccacagaagctaaaagagtttatgccctggagaaaagaatgaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgtcttattattaggggctcaccaggcactgggaagtctctagccactggcatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcacttccaccagacccagaccattttgatggatacaaacaacaggtggttacagtaatggatgacttgtgtcaaaaccctgatggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacatctaagtttgtcatcgcatccactaatgccagtaatatcatagtgccaacagtgtccgactctgacgctattcgccgcagattctacatggattgtgacattgaagtgacagactcatacaaaacagatctaggcagactggatgctgggcgggccgccaaactgtgctctgaaaacaacaccgcaaatttcaaacgctgcagcccattagtgtgtgggaaagctatccagctcagagatagaaaatctaaggttagatatagtgtggatacggtagtttcagagcttattagggaatacaataataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattagaatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcatccctgaaactcccaccaacgtggaacggcaccttaatagagcagtgcttgtcttgcaatccatcgccacagtagtggcggttgtatcgctagtgtatgtcatctacaagctctttgcagggttccaaggtgcgtattctggtgctcctaagcaagtacttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctccttgctgaggaggaacatcaggcaagtccaaacagaccagggccatttcactatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttgggttgagcacaaactcgtgaacatccttgatgcggttgaattggtggatgagcaaggagtcaacctggaactaacccttatcactcttgacactaatgaaaagtttagggatatcaccaaatttatcccagaaaatatcagcaccgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtaccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcgggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggcggtaatggcagacaaggtttttgcgcaggtctcaaaaggagttactttgctagtgaacaaggggagatccagtgggttaagcccaacaaagagactggaagactcagcatcaatgggccaacccgcaccaagctagagcccagtgtgttccatgatgtcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgcctcgaggtagactttgagcaggccttgttctctaagtatgtaggaaatacactatatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaatcaattgaagcagctagaaattaatacctctcaaatgagtatggaggaggcctgctacggtactgagaaccttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcctagaccctaccaccagagatgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagcttcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggctagtagtctaaatgattcagtgtaccttagaatggctttcggtcatttgtatgagactttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagctgccaattttgctccctggctcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagggcgttagaattggtccttagggagatagggtatagtgagggagcaatctcactcattgagggaatcaatcacacacaccatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcagggtgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactactcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcctatggagatgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggtctaaccatgactcctgcagataagtctccttgctttaatgaggttaattgggataatgcaaccttcctcaagaggggctttttacccgatgagcagtttccatttttgatccaccctaccatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagaccatgtgcggtccttgtgtctcctagcatggcacaatggtaagcaagaatatgaaaaatttgtgagcacaatcaggtctgtcccagtaggaagagcattggctattccaaattatgaaaatctcagacgcaattggctcgagttatttt-----agaggttatac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaa-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ742002.1_Human_enterovirus_71_strain_AFP2001071/EV71/GX/CHN/2001_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c---ccc---c---tccc-c------ag-t-gaaacttagaag--------------cagta-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgtaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-actcttaattatatcttgaccctcaacacagcaaga-----catgggttcacaggtgtccacacagcgctccggctctcatgaaaattcaaactcagccactg-agggttccaccattaactacactaccattaattactacaaggactcctatgctgccacagcaggcaagcagagtctcaagcaggatccagacaaatttgcaaatcctgttaaagatattttcaccgaaatggcagcaccgctgaagtccccatccgctgaggcatgtggatacagcgatcgagtggcgcaattaactattggcaactccaccatcaccacacaagaagcggcaaacatcatagtcggctatggtgagtggccttcctactgctcggattccgacgctacagcagtggataaaccgacgcgcccggatgtttcggtgaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctatcgatcagggttctgtattcacgtgcaatgcaatgctagcaaattccaccaaggagcgctcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacaggaacgg------aagacagtcaccccccttacaagcagactcaacctggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgccacaataatagtgccatacataaatgcactgccctttgattctgccttgaaccactgtaactttggtctgttagttgtgcctattagcccactagattacgaccaaggagcgacgccagtgatccccataactatcacattggctccaatgtgttctgaatttgcaggccttaggcaagcagttacgcaagggtttcccactgagttgaaacctggcacaaaccaatttttaaccactgatgatggcgtttcagcacccattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattttggaggtcaacaa----------tgtacccacgaatgccactagcttg------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagctgatcctgggcgaaatggaccgtggcagtctaccttattaggccagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgttcactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttggactgcagtcgtctgtcacccttgtaataccatggatcagcaacactcactacagagcacatgcccgagatggagtatttgactactacaccacagggttggtcagtatatggtatcagacaaattatgtggtcccaattggggcacccaatacagcctatataatagcactagcggcagcccaaaagaatttcactatgaagttgtgtaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagacgtaattg---agagttccat--------------------------aggagacagtgtgagcagagccctcacccaagctctaccggca--------cccacaggccagaacacacaggtgagcagtcaccgattggacactggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacgctgtgtccttaattcgcacagcacagctgagaccactctcgatagtttcttcagcagagcgggattagttggagagatagacctccctcttgaaggcacaac-taacccaaatggctatgctaactggggtatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacccaccgggcaggttgttccacaattgctccaatatatgtttgtaccacctggggcccccaagccagattccagggaatccctcgcatggcaaactgccactaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcaagtgcttatcaatggttttatgatggataccccacattcggtgaacacaagcaggagaaagatcttgaatatggggcatgtcccaacaacatgatgggcacattctcagtgcggaccgtaggaacctccaagtccaagtaccctttagtggttaggatttacatgaggatgaagcacgtcagggcgtggataccccgcccaatgcgcaaccaaaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgtacagcgat---caccac---------------------------------------tctcggg------------------------------------------aaatttgggcaacagtccggggctatttacgtgggtaattctagagtggttaaccgtcatcttgccactcacaatgattgggcaaatcttatttgggaggacagctctcgcgacttgctcgtgtcatctaccaccgcccaaggttgcgacacgattgcccgttgcaattgccagacaggggtgtattattgtaattcaaggagaaaacactacccagtcagtttctcaaaacccagcctaatctacgtagaggctagcgagtactacccagccagataccagtcacatctcatgctcgcacaaggccactcagaacctggtgattgtggcggtatccttagatgccaacacggtgtcgtcggtatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggatcttttgtggttggatgaagaagctatggaacagggcgtgtccgattacatcaag-ggtctcggtgatgctttcgggacaggctttactgatgcagtctcgagggaggttgaagctctcaagaactatcttataggatctgaaggagcagttgagaaaattttaaaaaatctcgttaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttacagcaaccttagctctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctaccttaggtatccctatcgctcaaaagcagagcgcctcgtggcttaagaagttcaatgacatggccaatgctgctaaggggttagagtgggtttccaacaagatcagcaaattcattgattggcttaaggagaaaattataccagcagccaaggagaaggttgaattcttaaacaacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagctatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctatacgccacagaagctaaaagagtttatgccctggagaaaagaatgaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccgggcactgggaagtctctagccactggcatcgttgctcgagcaattgctgacaagtaccactctagcgtgtactcacttccaccagacccagaccattttgatggatacaaacagcaggtggttacagtaatggatgacttgtgtcagaatcctgatggcaaggatatgtctttgttctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacatctaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtgtccgactctgacgctattcgccgcagattctacatggattgtgacattgaagtgacagactcatacaaaacagatctaggcagactggatgctgggcgggccgccaaactgtgctctgaaaacaacaccgcaaatttcaaacgctgcagcccattagtgtgtgggaaagctatccagctcagagatagaaaatctaaggttagatatagtgtggatacggtagtttcagagcttattagggaatacaataataggtccgccattggcaacacaatcgaggcattattccaaggcccacccaagttcaggccaattagaatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgt-agggatcaaggctggatcatccctgaaactcccaccaacgtggaacggcaccttaatagagcagtgcttgtcttgcaatccatcgccacagtagtggcggttgtatcgctagtgtatgtcatctacaagctctttgcagggtttcaaggtgcgtattcgggtgcccctaagcaaacacttaagaaacctgctcttcgcacagcaacagtgcagggtccgagccttgattttgctctctccctactcaggaggaacatcaggcaagtccaaacagaccagggccatttcactatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttgggttgagcacaaactcgtgaacatccttgatgcggttgaattggtggatgagcaaggagtcaacctggaactaactcttatcactcttgacactaataaaaagtttagggatatcaccaaattcatcccagaaaatatcagcaccgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtaccagtgggtgacgttgtgcagtatggcttcttgaatctcagtggcaagcctacccatcgcaccatgatgtacaactttcctactaaagcgggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggcggcaatggtagacaaggtttttgcgcaggtcttaaaaggagttactttgctagtgaacaaggggagatccagtgggttaagcccaacaaagagactggaagactcagcattaatggaccaacccgcaccaagctagagcccagtgtgttccatgatgtcttcgagggaaataaggagccagctgtcttgcacagtaaagacccccgcctcgaggtagactttgagcaggccttgttctctaagtatgtgggaaatacactatatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaatcaattgaagcagttagaaattaacacctctcaaatgagtatggaggaggcctgctacggtactgagaaccttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcctagaccccaccaccagagatgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagcttcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggctagtagtctaaatgattcagtgtaccttagaatggctttcggtcatttgtatgagactttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccctgacacattctggagcaagttgccaattttgctccccggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagggcattagaattggtccttagggagatagggtatagtgaggaagcaatctcactcattgagggaatcaatcacacacaccatgtgtatcgtaataagacctattgcgtgcttggtgggatgccctcagggtgttcgggaacatccatattcaactcaatgatcaacaatattattatcagagcactgcttataaaaacatttaagggcattgatttggatgagctcaacatggtcgcctatggagatgatgtgcttgccagctaccccttcccaattgattgcttggagttagcaaagacaggcaaggagtatggtctaaccatgactcctgcagataagtctccttgctttaatgaggtcaattgggataatgcaaccttcctcaagaggggcttcttacctgatgagcagtttccatttttgatccaccctaccatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagaccatgtgcggtccttgtgtctcctagcatggcacaatggtaagcaagaatatgaaaaatttgtgagcacaattaggtctgtcccagtaggaagagcattggctattccaaattacgaaaatctcaggcgcaattggctcgaattatttt-----agaggctgtac-------------------------acac---------------ctcgaccc-caccagaa----atctggt------c-g-----tgaatatcg-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX678885.1_Human_enterovirus_71_strain_SH-17/SH/CHN/2002_complete_genome
------------------ttaaaa--cg--cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c---ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccat-gatcaa-tagcaggcatgacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggtgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgccaacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgtaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttagttatatcttgaccctcaacacagcaaaa-----catgggttcgcaggtgtccacacagcgctccggttctcacgaaaattcaaactcagccactg-agggttccaccataaactacactaccattaattattacaaagactcctatgctgccacagcaggcaagcagagtctcaagcaggatccagacaaattcgcaaaccctgttaaagacattttcactgagatggcagcaccactgaagtccccatccgctgaggcatgtgggtacagcgatcgagtggcgcaattaactattggcaactccaccatcaccacacaagaagcggcaaacattatagtcggctatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccgacgcgcccggatgtttcggtgaataggttttacacattggacactaagttgtgggagaaat------------------cgtctaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctatcgatcagggttctgtatccacgtgcaatgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccggagtatgtcattgggacagtggcaggcggtacaggaacgg------aagacagtcaccccccctacaagcagactcaacccggtgccgatgggttcgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacaccagtggattaatttgaggaccaacaattgcgccacaataatagtgccatacataaacgcactgcccttcgattctgccttgaaccactgtaactttggcctgttagttgtgcctattagtccactagattacgaccaaggagcgacgccagtgatccctataactattacattggctccaatgtgttctgaatttgcaggtcttaggcaagcagtcacgcaagggtttcccactgagttaaaacctggcacaaaccaatttttaaccactgatgatggcgtttcagcacccattctaccaaactttcatcccaccccgtgtatccatatacctggtgaagtaaggaacttgctagaactatgccaggtggagactattttggaggtcaacaa----------tgtacccacaaatgccactagcttg------atggagagactacgttttccggtctcagcacaagcag------ggaaaggtgagctgtgcgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtctaccttattgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgttcactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggccctttgcccaaggaccgggcgaccgccatgctgggtacgcacgtcatctgggattttgggctgcagtcgtctgttacccttgtaataccatggattagcaatactcactacagagcacatgcccgagatggagtgtttgactactacaccacggggttggtcagtatatggtatcagacaaattatgtggtaccaattggggcacccaatacagcctatataatagcactagcggcagcccaaaagaatttcaccatgaaattgtgtaaggatgctagtgatatcctgcagacgggcaccatccagggagataga--------gtggcagatgtaattg---agagctccat--------------------------aggagacagtgtgagtagagccctcacccaagctctaccggca--------cccacaggccagaacacacaggtgagcagtcaccgattggacactggtaaagttccagcactccaagctgctgaaattggagcatcgtcaaatgctagtgatgagagtatgattgagacacgctgtgtccttaattcgcacagcacagctgagaccactctcgatagtttcttcagcagagcggggttagttggagagatagacctccctcttgaaggcacaac-taacccaaatggttatgctaactgggatatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacccactggggaggttgtcccacaattgcttcaatatatgtttgtaccacctggggcccctaagccagactccagggaatccctcgcatggcaaactgccactaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtctcctgcgagtgcttatcaatggttttatgatggatatcctacattcggtgaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggcacattctcagtgcggaccgtaggaacctccaagtccaagtaccctttagtggttaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccaaaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------tctcggg------------------------------------------aaatttgggcaacagtccggggccatttatgtgggtaattttagagtggttaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagatagctctcgcgacttgctcgtgtcatctaccaccgcccaaggttgcgacacgattgcccgttgcaattgccagacaggggtgtattattgtaattcaaggagaaaacattacccagtcagtttctcaaaacccggcctaatctacgtagaggctagcgagtattacccagccagatatcagtcacatctcatgctcgcgcaaggtcactcggaacctggtgattgtggcggcatccttagatgccaacatggtgtagtcggtatagtgtccactggtggcaatgggctcgttggctttgcagacgtcagggatctcttgtggctggatgaagaagctatggagcagggcgtgtccgattacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcggtctcaagggaggttgaagctctcaagaactatcttataggatctgaaggagcagttgagaaaattttaaaaaatctcattaaactaatctctgcactagtgattgtaatcagaagtgattacgacatggtcacccttacagcaaccttagctctgataggttgtcatggcagcccttgggcttggatcaaagccaaaacagcttctatcttaggtattcctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaagggattagagtgggtttccaacaagatcagcaaattcattgattggctcaaggagaaaattgtaccagcagccaaggagaaggttgaattcctaaacaatttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgtaagttccaaccgttatacgccacagaagctaaaagagtttatgccctggagaaaagaatgaataattacatgcagttcaagagcaaacatcgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggcatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcacttccaccagacccagaccactttgatggatacaaacaacaggtggttacagtaatggatgatttgtgtcaaaaccctgatggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacatctaagtttgttatcgcatccaccaatgccagcaacatcatagtaccaacagtgtccgactctgacgctattcgtcgcagattctacatggattgtgacattgaagtgacagactcatataaaacagatctaggcagactggatgctgggcgggccgccaaactgtgctccgaaaacaacaccgcaaatttcaaacgctgcagcccattagtgtgtgggaaagctatccaactcagagatagaaaatctaaagttagatatagtgtggatacggtagtttcagagcttattagggaacacaataataggtccgccattggcaacacgatcgaagctctattccaaggcccacccaagttcaggccaattagaatt---agccttgaagagaaaccaaccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcatccctgaaactcccactaacgtggaacggcaccttaatagagcagtgcttgtcttgcaatccatcgccacagtggtggcggttgtgtcgctagtgtatgtcatctacaagctctttgcagggtttcaaggtgcgtactctggtgctcccaagcaagtacttaagaaacctgctcttcgcacagcaacagtacagggtccgagccttgattttgctctctccctgttgaggaggaacatcaggcaagtccaaacagaccagggccatttcaccatgttgggtgttagggatcgtttagcagtcctcccacgccactcacaacccggtaaaactatttgggttgagcacaaacttgtgaacatccttgatgcggtagaactggtggatgagcaaggagtcaacctggaattaacccttatcacccttgacactaatgaaaagtttagggatatcaccaaattcatcccagaaaatatcagcaccgctagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtaccggtgggcgatgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaacttccctactaaagcgggacagtgcggaggagtggtgacatctgttgggaaggttattggtattcacattggcggcaatggcagacaaggtttttgcgcaggtcttaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaacaaagagactggaagactcaacatcaatgggccaacccgaaccaagttagagcccagtgtgttccatgatgtcttcgagggaaataaggaaccagctgtcttacacagtaaagacccccgcctcgaggtagactttgagcaggccttgttctccaagtatgtaggaaacacactatatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaatcaattgaaacagctagaaattaatacctctcaaatgagtatggaggaggcctgctacggtactgagaaccttgaagctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcctagaccctaccaccaaagatgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttattccacttatgtcaaggacgagcttcgctcaatcgataaaattaagaaagggaagtcccgtctgattgaggctagtagtctaaatgattcagtgtaccttagaatggctttcggtcatttgtacgagactttccacgcaaatcctgggacgataactggatcagctgtggggtgtaaccctgacacattctggagcaagttgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtctggttcagggcattagaattggtccttagggagatagggtatagtgaagaagcaatctcacttattgagggaatcaatcacacacaccatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcagggtgttcgggaacatccattttcaactcaatgatcaataacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgagctcaacatggtcgcctatggagatgatgtgctcgccagctaccccttcccaattgattgcttggagttagcaaagacaggcaaggagtatggtctaactatgactcctgcagataagtctccttgctttaatgaggttaattgggataacgcaaccttcctcaagaggggctttttacccgatgagcagttcccatttttgatccaccctaccatgccaatgagggagatccacgagtccattcgatggaccaaggacgcacgaaacactcaagaccacgtgcggtccttgtgtctcctagcatggcacaatggtaagcaagaatacgaaaaatttgtgagcacaattaggtctgtcccagtaggaagagcattggctattccaaattatgaaaatctcagacgtaattggctcgagttatttt-----agaggctatac-------------------------acac---------------ctcgaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>EU131776.1_Human_enterovirus_71_strain_N3340-TW-02_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaaggactctggtacttcggtacctttgtgcgcct-g-ttttata---c---ccc---c---cccc-c------ag-t-ggaacttagaag--------------caaca-agccac-gatcaa-tagtaggcataacactccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-cagtagcaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttacattggctgcttatggtgacaattaaa-------gagttgttgccatatagctattggattggccatccgg--tgtgtaacagagcaattgtt-----taccta----ttcatt-ggttttgtaccat-----taacctt--------------gaaatctgtgacc-actcttaattatatcttgaccctcaacacagcaaaa-----catgggttcacaggtgtccacacagcgctccggttctcacgaaaattcaaactcagccactg-agggttccaccattaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaagcagagtctcaagcaggatccagataaattcgcaaatcctgttaaagacattttcactgaaatggcagcaccactgaagtccccatccgctgaggcatgtggatacagcgatcgagtggcgcaattaactattggcaattccaccatcactacacaagaagcggcaaacatcatagtcggctatggtgagtggccttcctactgctcggattctgatgccacagcagtggataaaccgacacgcccggatgtttcggtgaataggttttatacattggacactaagttgtgggagaagt------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttggacaaaatgcacaattccactacctctatcgatcagggttctgtatccacgtgcaatgcaatgctagtaaattccaccaaggagcgctcctagtcgctatcctaccagaatatgtcattgggacagtggcaggcggtacaggaacgg------aagacagtcaccccccttacaagcagactcaacccggcgccgatggcttcgaattgcagcacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgccacaataatagtgccatacataaacgcactgccctttgattctgccttgaaccactgtaactttggcctgctagttgtacctattagcccgctagactacgaccaaggagcgacgccagtgatccctataactatcacattggctccaatgtgctctgaatttgcaggccttaggcaagcggttacgcaagggttccccactgagttgaaacctggcacaaaccaatttttaaccactgatgatggcgtttcagcacccattctaccaaactttcaccccaccccgtgcatccatatacctggtgaagttaggaacttgctagagttatgtcaggtggagaccattttggaggtcaacaa----------tgtacccacgaatgccactagcctg------atggagagactgcgctttccggtctcagcgcaagcgg------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtctaccttattaggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgttcactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggccccttgcccaaggaccgggcgaccgccatgttgggtacgcacgtcatctgggatttcgggctacagtcgtctgttacccttgtaataccatggatcagcaacactcactacagagcgcacgcccgagatggagtatttgactactacaccacagggttggtcagtatatggtatcagacaaattatgtggttccaattggggcacccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgtaaggatgctagtgatatcctgcaaacgggcaccatccagggagatagg--------gtggcagatgtgattg---agagttccat--------------------------aggagacagtgtgagcagggccctcacccaagctctaccggca--------cccacaggccagaacacacaggtgagcagtcaccgattggacactggtaaggttccagcgctccaggctgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacgctgtgtccttaattcgcacagcacagctgagaccactctcgacagtttcttcagcagagcgggattagttggtgagatagacctccctcttaaaggcacaac-taacccaaatggttatgctaactgggatatagatataacaggttacgcgcaaatgcgtagaaaagtggagctattcacctacatgcgctttgacgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaaatgctccaatatatgtttgtaccacctggggcccccaagccagattccagggaatccctcgcatggcaaactgccactaacccctcagtttttgttaagctgtcagaccctccagcacaggtttcggtaccattcatgtcacctgcgagtgcttatcaatggttttatgatggatatcctacattcggtgaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggcacattctcagtgcggactgtaggaacctccaagtccaagtaccctttagtggttaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgcaaccaaaactacctatttaaagccaacccaaattacgccagcaa----ctccattaagccaactggtaccagtcgtacagcgat---caccac---------------------------------------tctcggg------------------------------------------aaatttgggcaacagtccggggccatttatgtgggtaattttagagtggttaaccgccaccttgccactcacaatgattgggcaaatcttgtttgggaggacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgcgacacgattgcccgttgcaattgccagacaggggtgtattactgtaattcaaggagaaagcactacccagtcagtttctcaaaacccagcctaatctacgtagaggctagcgagtactacccagccagataccagtcgcatctcatgctcgcacaaggccactcagaacctggagattgtggcggtatccttagatgccaacatggtgtcgtcggtatagtgtctactggtggcaatgggctcgttggctttgcagatgtcagggatcttttgtggttggatgaagaagctatggagcagggcgtgtcagattacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtctcgagggaagttgaagctctcaagaactatcttataggatctgaaggagcagttgagaaaattttaaaaaacctcattaaactaatctctgcattggtgattgtaatcagaagtgattacgacatggttacccttacagctaccttagctctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcagaagcagagcgcttcctggctcaagaagttcaatgacatggccaccgctgctaaggggttagagtgggtttccaacaagatcagcaaattcattgattggcttaaggagaaaattgtaccagcagccaaggaaaaggttgaatttctaaacaacttgaaacagttacca-ctactagagaatcagatctcaaacttggaacaatctgctgcctcacaggaagaccttgaggttatgtttgggaatgtgtcgtatctggccca---------cttctgtcgcaagttccaaccgctatacgccacagaagctaagagagtttatgccctggagaaaagaatgaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcgttattaggggctcaccaggcactgggaagtctctagccactggcatcattgctcgagcaattgctgacaagtaccactctagcgtatactcacttccaccagacccagaccattttgatggatacaaacagcaggtggtcacagtgatggatgacttgtgtcagaatcctgatggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttcccttgaggagaagggagtttccttcacatctaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtgtccgactctgacgctattcgccgcagattctacatggattgtgacattgaagtgacagactcatacaaaacagatctaggcagactggatgctgggcgggccgccaaactgtgctctgaaaacaacaccgcaaattttaaacgctgcagtccattagtgtgtgggaaagctatccagctcagagataggaaatctaaggttaggtatagtgtggatacggtagtttcggagcttattagggaatacaacaataggtccgccatcggtaacacaatcgaggcactattccaaggcccgcccaaatttaggccaattagaata---agccttgaagaaaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggttggattatccctgaaactcccaccaacgtggaacggcaccttaatagagcagtgcttgtcttacaatccatcgccacagtagtggcggttgtatcgctagtgtatgtcatctacaaactctttgcagggtttcaaggtgcgtattctggtgcccctaagcaagtacttaagaaacctgcccttcgcacagcaacagtgcagggcccaagccttgattttgctctctccctgctgaggaggaacatcaggcaagtccaaacagaccaaggtcatttcactatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttgggttgagcacaaactcgtgaacatccttgatgcggttgagttggtggatgagcaaggagtcaacctggaactaacccttatcactctcgacactaatgaaaagtttagggatatcaccaaattcatcccagaaaatatcagcaccgccagtgatgctaccctagtgatcaacacggagcacatgccctcaatgtttgtaccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaaacctacccatcgcaccatgatgtacaactttcctactaaagcggggcagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggcggtaatggcagacaaggtttttgcgcaggtcttaaaaggagttactttgctagtgagcaaggagagatccagtgggttaagcccaacaaagagaccggaagactcagcatcaatggaccaacccgcaccaagctagaacccagtgtgttccatgatgtcttcgagggaaataaggaaccagctgtcttgcacagtaaagacccccgcctcgaggtagactttgagcaggccttgttctctaagtatgtaggaaatacactatatgagcctgacgagtacatcaaagaagcagcccttcattatgcaaatcaattgaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaaccttgaggctattgatctacatactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcctagaccctaccaccagagatgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagcttcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggctagtagtctaaatgattcagtgtaccttagaatggctttcggtcatttgtatgagactttccacgcaaatcctgggacaataactggatcagccgtggggtgcaatcctgacacattttggagcaagttgccaattttgctccctggttcactctttgccttcgactactcaggttatgatgccagccttagccctgtctggttcagggcattagaattggtccttagggaggtagggtatagtgaggaggcaatctcacttattgagggaatcaatcacacacaccatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcagggtgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgagctcaacatggtcgcctatggagacgatgtgctcgccagttaccccttcccaattgattgcttggagttagcaaagacaggcaaggagtatggtttaaccatgactcctgcagataaatctccttgctttaatgaggttaattgggataatgcaaccttcctcaagaggggctttttacccgatgagcagtttccatttttgatccaccctaccatgccaatgagggagatccatgagtctattcgatggaccaaggacgcgcgaaacactcaagaccatgtgcggtccttgtgtctcctagcatggcacaatggcaagcaagaatatgaaaagtttgtgagcacaattaggtctgtcccagtaggaagagcattagctattccaaattatgaaaatctcagacgcaattggctcgaattatttt-----agaggctacac-------------------------gcac---------------ctcgaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC436265.1_Enterovirus_A71_isolate_V04-2218217_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c---ccc---c---ctcc-c------aa-t-gaaacttagaag--------------caaca-aaccac-gatcaa-tagcaggcgtaacactccagttatgtctcga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-cagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgtaacagagcgattgtt-----tattta----ttcatt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-actcttaattatatcttgaccctcaatacagcaaaa-----tatgggttcacaggtgtctacacagcgctccggttctcacgaaaattcaaactcagccactg-agggttccaccattaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaagcagagtctcaagcaggatccagacaaatttgcaaatcctgttaaagacattttcactgaaatggcagcaccactgaagtccccatccgctgaggcgtgtggatacagcgatcgagtggcgcaactaactattggcaactccactatcaccacacaagaagcggcaaacatcatagtcggctatggtgagtggccttcctattgctcggattctgatgctacagctgtggataaaccgacacgcccggacgtttcggtgaacaggttttatacattagacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctatcgatcagggttctgtatccacgtgcaatgcaatgctagtaaattccaccaaggagcgctcctagtcgctgtcctgccagaatatgtcattgggacggtggcaggtggtacaggaacgg------aagacagtcaccccccttacaagcagactcaacccggcgctgacggttttgaattgcaacacccatacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggactaacaattgtgctacaataatagtgccatacataaatgcactgccctttgattctgccttgaaccattgtaactttggcctgttagttgtgcctattagcccgctggactatgaccaaggagcaacgccagtgatccctataactatcacattggctccaatgtgctctgagtttgcaggtcttaggcaagcagtcacgcaaggtttccccactgaattgaaacctggcacaaaccaatttttgaccactgatgatggtgtttcagcacccatcctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccatcttggaggtcaataa----------tgtgcccacaaatgccactagcttg------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcaatctaccttattaggtcagttgtgcgggtactacacccaatggtcaggatcgttggaagtcaccttcatgttcactggatccttcatggccaccggcaagatgctcatagcctatacaccaccaggaggccctttgcccaaggaccgggcgaccgccatgttgggtacgcacgtcatctgggattttgggctgcagtcgtctgttacccttgtaataccatggattagcaacactcactacagagcacacgcccgggatggagtatttgactactacaccacagggttggtcagtatatggtatcagacaaattatgtggttccaattggggcacccaatacagcctatataatagcactagcggcagcccaaaagaatttcactatgaagttgtgcaaggatgctagtgacatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---agagttccat--------------------------aggagacagtgtgagtagagccctcactcaagctctaccggca--------cccacgggtcaaaacacacaggtgagtagtcaccgattggacactggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacgctgtgtccttaattcgcacagcacagctgagactactcttgacagtttcttcagcagagcgggactagttggtgagatagacctccctcttgaaggcacaac-taacccaaatggctatgctaactgggatatagatataacaggttacgcgcaaatgcgtagaaaggtggagctgttcacctacatgcgctttgacgcagaattcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgcttcaatatatgtttgtaccacctggggcccccaagccagattccagagagtccctcgcatggcaaactgccactaacccctcagtttttgttaagctgtcagaccctccagcacaggtttcagtaccattcatgtcaccagcgagtgcttatcaatggttttatgatggatatcccacattcggtgaacataaacaggagaaggatcttgaatatggggcatgtcctaacaacatgatgggcacattctcagtgcggactgtaggaacctccaagtccaagtaccctttagtggttaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgaaaccaaaactacctattcaaagccaatccaaattatgctggcaa----ctctattaaaccaactggtgccagtcgtacagcgat---taccac---------------------------------------tctcggg------------------------------------------aaatttgggcaacagtccggggccatttacgtgggtaattttagagtggttaaccgtcatcttgccactcataatgattgggcaaaccttgtttgggaggacagctctcgcgacttgcttgtgtcatctaccaccgcccaaggttgcgacacgattgcccgttgcaattgccagacaggggtgtattactgtaattcaaggagaaaacactacccagtcagtttctcaaaacctagtctaatctacgtagaggctagcgagtactacccagccagataccagtcgcatctcatgctcgcacaaggtcactcagaacctggagattgtggcggtatccttagatgccaacatggtgtcgtcggtatagtgtctactggtggcaatgggctcgttggctttgcagatgtcagggatcttttgtggttggatgaagaagctatggagcagggcgtgtccgattacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtctcgagggaagttgaatctctcaagaactatcttataggatctgaaggagcagttgagaaaattttaaaaaacctcattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttacagcaaccttagctctgataggttgtcatggcagtccttgggcttggattaaagccaaaacagcttctatcttaggcatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaatgctgctaaggggttagagtgggtttccaacaagattagcaaattcattgattggcttaaggagaaaatcataccagcagctaaggaaaaggttgagttcctaaacaacttaaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcgcaagaagaccttgaggttatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctatatgccacagaagctaaaagagtttatgccctggagaaaagaatgaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggcatcattgctcgagcaatcgctgataagtaccactctagtgtatactcactcccgccagacccagaccattttgatggatacaaacagcaggtggttacagtgatggatgatttgtgccagaatcctgatggcaaggacatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttcccttgaagagaagggagtttctttcacatctaagtttgttatcgcatccaccaatgccagtaacatcatagtgccaacagtgtccgactctgacgctattcgccgtagattctacatggattgtgacattgaagtgacagactcatataaaacagatctaggcagactggatgctgggcgggccgccaaattgtgctccgagaacaacaccgcaaatttcaaacgctgcagtccattagtgtgtgggaaagctgtccagctcagagatagaaaatccaaggttaggtatagtgtggatacggtagtttcagagcttattagggagtataacaataggtccgccattggcaacacaatcgaggctctattccaaggcccgcccaagttcaggccaattagaatt---agccttgaagaaaaaccagccccagacgctattagcgatcttcttgccagcgtagatagtgaagaagtgcgccagtactgc-agggatcaaggttggatcatccctgaaactcccaccaacgtggaacggcaccttaatagagcagtgcttatcttgcaatccattgccacagtggtggcggttgtatcgctggtgtatgtcatctacaagctttttgcagggtttcaaggtgcgtattccggtgctcccaagcaagtacttaagaaacctgctcttcgcacagcaacagtgcagggtccgagccttgattttgctctctccctgctgaggagaaacatcaggcaggtccaaacggaccagggtcatttcactatgttgggtgttagggatcacttagcagtcctcccacgtcactcacaacccggcaaaactatttgggttgagcacaaacttgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaactaacccttatcactcttgacactaatgaaaagtttagggacatcaccaaattcatcccagaaaatatcagcaccgccagcgatgccaccctagtgattaacacggagcacatgccctcaatgtttgtaccggtgggtgacgttgtacagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaattttcctactaaagcgggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggtaatggcagacaaggtttttgcgcgggtcttaaaaggagttactttgccagtgaacaaggagagatccagtgggttaagcccaacaaagagaccggaagactcagcatcaatggaccaacccgcaccaagctagagcccagtgtgttccatgatgtcttcgagggaaacaaggaaccggctgtcttgcacagtaaagacccccgcctcgaggtagatttcgaacaggccttgttctctaagtatgtaggaaatacactatatgagcctgacgagtacattaaagaggcagcccttcattatgcgaatcaattgaaacagctagaaattaatacctctcaaatgagtatggaggaggcctgctacggtactgagaaccttgaggctattgatcttcatactagtgcaggttacccctatagtgccctagggataaagaaaagagacatcctagaccccaccaccagagatgtgagcaaaatgaagttttacatggacaaatatggtcttgatctcccttactccacttatgtcaaggatgagcttcgctcaattgataaaattaagaaagggaagtcccgcctgattgaggctagtagtctaaacgattcagtgtaccttagaatggcttttggccatttgtatgagactttccacgcaaatcctggaacgataactggatcagccgtggggtgtaaccctgacacattttggagcaagttgccaatcttgctccccggttcactctttgccttcgattactcaggttatgatgctagccttagccctgtctggttcagggcattagaattggtccttagggagatagggtatagtgaggaagcaatctcactcattgagggaatcaatcacacacatcatgtgtaccgtaataagacctattgtgtgcttggtgggatgccctcagggtgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggtattgatttggatgagctcaacatggttgcctatggagacgatgtgctcgccagttaccccttcccaattgattgcttggagttagcaaagacaggtaaggagtatggcttaaccatgactcctgcagataaatctccttgctttaatgaggtcaattgggataatgcaaccttcctcaagaggggctttttacccgatgagcagtttccattcttgatccaccctaccatgccaatgagggaaatccatgagtccattcgatggaccaaggacgcgcgaaacactcaagaccatgtgcggtccttgtgtctcttagcatggcacaatggtaagcaagagtatgagaaatttgtgagcacaattaggtctgtcccagtgggaagagcattggctattccaaattatgaaaatctcagacgcaattggctcgaattatttt-----agaggctatac-------------------------acac---------------ctcgaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ742001.1_Human_enterovirus_71_strain_AFP2001064/EV71/GX/CHN/2001_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacctaca-gggcccat-t-gggcgcaagcactctggcacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcatgacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtaccaatagactgt-tcacacggttgaaggggaaaacgttcgttatccggctaactacttcggaaaacc-cagtaacaccatggaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgtaacagagcaattatt-----taccta----tttgtt-ggttttgtaccat-----taacctt--------------gaagtctgtgacc-acccttaactatatcttgaccctcaacacagtaaaa-----catgggttcacaagtgtccacacagcgttccggttctcacgaaaactctaactcagctactg-agggttccaccataaattatactaccattaattactacaaagactcctatgccgccacggcaggcaagcagagtctcaagcaggatccagacaaatttgcaaatcctgttaaagacattttcaccgaaatggcagcaccgcttaagtccccgtccgctgaggcatgtgggtacagcgatcgagtggcgcaattaactattggcaactctaccatcaccacacaagaagcggcaaacattatagtcggctatggtgagtggccttcctactgctcggattctgacgctacagcagtggataagccaacgcgcccggatgtttcggtgaataggttttacacattggacaccaaattgtgggagaaat------------------cgtccaaggggtggtattggaagttcccggatgttttaactgaaaccggggtttttggacaaaatgcacaattccactacctctatcggtcagggttctgtatccacgtgcaatgtaatgctagtaaattccaccaaggagcgctcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttacaagcagactcaacccggcgctgatggctttgaattacaacacccgtacgtgcttgatgctggcattccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgccactataatagtgccatacataaacgcactgccctttgattctgccttgaaccactgtaactttggcctgttagttgtgcccattagtccactagattacaaccaaggagcgacgccagtgatccctataaccatcacattggctccaatgtgttctgaattcgcaggtcttaggcaagcagttacgcaagggtttcccactgagctgaaacctggcacaaaccaatttttaaccactgatgatggcgtttcagcacccattctaccaaacttccaccccactccgtgtatccatatacccggtgaagttagaaacctactagagctatgccaggtggagaccattttggaggtcaataa----------tgtacccacgaatgccaccagctta------atggagagactgcgctttccagtctcagcacaagcag------ggaaaggtgagttgtgtgcggtgttcagagccgaccctgggcgaaatggaccgtggcagtctaccttattgggccagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgttcactggatccttcatggctaccggtaagatgctcatagcctatacaccaccaggaggccccttgcccaaggaccgggcgaccgccatgttgggtacgcacgtcatttgggatttcgggttgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgaggtggagtatttgactactacaccacagggttagtcagtatatggtatcagacaaattatgtggttccaattggggcacccaatacagcctatataatagcactggcggcagcccaaaagaatttcactatgaagttgtgcaaggatgctagtgatatcttacagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagccctcactcaagctctaccggcg--------cccacaggccagaacacacaggtgagcagtcaccgattggacactggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagcgatgagagcatgattgagacacgctgtgttcttaattcgcacagcacagctgagaccactctcgatagtttcttcagtagagcgggattagttggagaaatagacctccctctcaaaggcacaac-taacccaaatggttatgctaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgttttgacgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacagttgctccaatacatgttcgtgccacctggggcccccaagccagattccagagaatccctcgcatggcaaactgccaccaacccctcagtttttgttaagctgtcagaccccccagcaccggtttcagttccattcatgtcacctgcgagtgcttatcaatggttttatgatggatatcccacattcggtgaacacaaacaggagaaagatcttgaatatggggcatgtcccaacaacatgatgggcacattctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatggagcacgtcagggcgtggatacctcgcccaatgcgcaaccaaaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtgccagtcgtacagcgat---cactac---------------------------------------tctcggg------------------------------------------aaatttgggcaacagtccggggccatttatgtgggtaactttagagtggttaaccgtcatcttgccactcacaatgattgggcaaatcttatttgggaagacagctctcgcgacttgctcgtgtcatctaccaccgcccaaggttgtgacacgattgctcgttgcaattgccagacaggggtgtattattgtaattcaaggagaaagcactacccagtcagtttctcaaaacctagcctgatctatgtagaggctagcgagtattacccagccagataccagtcacatctcatgctcgcacaaggtcactcagaacctggtgattgtggcggtatccttaggtgccaacacggtgtcgtcggtatagtgtctactggtggcaatgggctcgttggctttgcagatgtcagggatctcttgtggttggatgaagaggctatggagcagggcgtgtccgattacatcaag-ggtctcggagatgcttttgggacgggcttcactgatgcggtttcgagggaggttgaggctcttaagaattatctcatagggtctgaaggagcagtcgagaaaattttaaaaaacctcattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggttactcttacagcaaccttagctctgataggttgtcatggcagcccttgggcttggatcaaagccaaaacagcttctatcttaggcatccctatcgctcaaaagcaaagcgcatcctggctcaagaaattcaatgacatggccaacgctgctaaggggttagagtggatctccaacaagattagtaaatttattgattggcttaaggagaaaattataccagcagccaaggagaaggttgaattcctaaacaacttgaaacagttgcca-ctgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctatacgccacagaagctaaaagagtttatgccctggagaaaagaatgaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccgggcactgggaagtctctagccactggcatcgttgctcgagcaattgctgacaagtaccactctagcgtgtactcacttccaccagacccagaccattttgatggatacaaacagcaggtggttacagtaatggatgacttgtgtcagaatcctgatggcaaggatatgtctttgttctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacatctaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtgtccgactctgacgctattcgccgcagattctacatggattgtgacattgaagtgacagactcatacaaaacagatctaggcagactggatgctgggcgggccgccaaactgtgctctgaaaacaacaccgcaaatttcaaacgctgcagcccattagtgtgtgggaaagctatccagctcagagatagaaaatctaaggttagatatagtgtggatacggtagtttcagagcttattagggaatacaataataggtccgccattggcaacacaatcgaggcattattccaaggcccacccaagttcaggccaattagaatt---agccttgaagagaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtgcgccagtactgt-agggatcaaggctggatcatccctgatactcccaccaatgttgagcggcaccttaatagagcagtgcttgtcatgcaatccatcgccacagtagtggcggttgtctcgttagtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattccggtgctcctaagcaagcacttaagaaacctgttcttcgcacagcaactgtgcagggcccgagccttgattttgccctctccctgctgaggaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgctgggtgttagggatcgtttagcagtcctcccacgtcactcacaacctggcaagactatttgggttgagcacaaactcgtgaacgtccttgatgcagttgaattagtggatgagcaaggagtcaacctggagctaaccctaattactcttgacactaatgaaaagtttagggatatcaccaaattcatcccagaaagtattagtactgccagtgatgccaccttagtgatcaacacggagcacatgccctcaatgtttgtgccggtgggtgatgttgtacagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcgggacagtgtggaggagtggtgacatctgttgggaagattatcggtatccacattggcggtaatggcaggcaaggtttttgtgcaggcctcaaaaggagttactttgctagtgagcaaggagagatccagtggattaagcctaataaagaaactggaagactcaacatcaatgggccaatccgcaccaaactagagcccagcgtgttccatgatattttcgagggaaataaggaaccagctgtcttgcacagcaaagacccccgtctcaaggtagactttgagcaggccttgttctctaagtatgtggggaatacactatatgagcctgacgaatacatcaaagaggcagcccttcattacgcaaatcaattgaaacagctagaaattaatacctctcaaatgagtatggaggaggcctgctatggtactgaaaaccttgaggctattgatcttcatactagtgcaggttatccctacagtgccctgggaataaagaaaagagacattctagaccctgtcaccagggatgtgagcaaaatgaagttctacatggataaatacggtcttgacctcccttactccacttatgtcaaggacgagcttcgctcaattgacaaaattaagaaagggaagtcccgtctgattgaggctagtagtctgaatgattcagtgtgcctcagaatggctttcggtcacttgtatgagactttccacgcaaaccctgggacgataactgggtcagccgtggggtgcaaccccgatacattctggagcaaattgccaattttgctccctggttcactctttgcctttgactactcaggctatgatgctagccttagccctgtctggttcagagcattagaactggttcttagggagatagggtatagtgagggagcagtctcgctcattgaagggatcaaccacacacaccatgtgtatcgtaataaaacctattgtgtgcttggtgggatgccctcagggtgttcgggaacatccgttttcaactcaatgatcaacaacattattatcagaacactgctcataaaaacatttaagggcattgacttggatgagctcaacatggttgcctatggagatgatgtgcttgccagctaccccttcccaattgattgcttggagttggcaaagacaggcaaggagtatggtctaaccatgactcctgcagataagtctccttgttttaatgaggttaattggggcaatgcaactttcctcaagaggggctttttacctgatgagcagttcccatttttgatccaccctattatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacactcaagaccatgtgcggtccttgtgtctcctagcgtggcacaatggtaagcaagagtatgagaaatttgtgagcacgattaggtctgtcccagtaggaagagcgttggctattccaaattacgaaaatctcaggcgcaattggctcgaactatttt-----agaggctatac-------------------------acac---------------ctcgaccc-caccagaa----atctggt------c-g-----tgaatatcg-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HM807310.1_Human_enterovirus_71_strain_cmuh-050530-5_complete_genome
------------------ttaaaa--cag--ct-gtgggttg-t-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata-----acccc---c---cccc--------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtagcatcatgaaagttgcggagggcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaaatctgtgacc-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattattataaagactcctatgctgccacagcaggcaaacagagtctcaaacaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccattgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaactaactattggtaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgtccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagttgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttacaagcagactcaacctggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcatcccaatatcacagtcaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccgtatataaacgcactgccttttgattctgccttgaaccactgtaactttggcctattagttgtgcccattagcccactagattacgatcaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaagcggttacgcaagggtttcccactgagctgaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacccattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaatttgctagagttatgccaggtggagaccattttggaggtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctatgtgcggtgttcagagccgatcctgggcgaaatggaccgtggcagtccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacacacgtcatctgggattttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaaaaacttcactatgaagttgtgtaaggatgctagtgatatcctgcagacaggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagcccttactcaagctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggtaaggttccagcactccaagctgctgaaattggggcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgaaaccactcttgatagtttctttagcagagcaggattagttggagagatagatctcccgcttgaaggcacaac-taacccaaatggttacgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccgggcaagttgtcccacagttgctccaatatatgtttgtgccacctggagcccctaagccggattccagggaatccctcgcatggcaaaccgctaccaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgagtatggggcatgtcctaacaacatgatgggcacattctcagtgcggactgtagggacctccaagtccaagtaccctttggtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactatctattcaaagctaacccaaattatgctggcaa----ctccattaaaccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcaacagtctggggccatttacgtgggtaactttagagtagttaaccgtcatcttgccacacacaatgattggacaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaagggtgtactattgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgtggtggtatccttagatgccaacatggcgtcgtcggtatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtttcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcaggagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttccattttaggcatccctatcgctcaaaagcaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagcaagttcattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacaattgcca-ctactagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccagccgctatacgccactgaagctaaaagagtttatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctgattattagaggctcccccggcacggggaagtctctagccactggtatcattgctagagcaaccgctgataagtaccactccagcgtgtactcgcttccaccagacccagatcattttgacggatacaaacaacaggtggtcgcggtcatggatgatctctgccagaacccggacggaaaagacatgtccctattttgtcaaatggtttctacagtagattttgtaccacccatggcatcactagaggagaaaggagtgtccttcacctctaagtttgtcattgcatcgaccaatgctagtaacatcatagtccccacagtttcagattcagatgcaattcgcaggcgattctatatggactgcgatatagaagtgacagattcttacaagacagacctcggtcggctggacgcaggtagagctgccaagctttgtacagaaaataacactgctaattttaagagatgcagcccactggtgtgtggtaaggctattcagctgagagacaggaagtccaaagtgagatatagcgtcgacaccgtggtatcggaactgatcagagagtacaacaatagatctgctattgggaatactatagaagcactctttcaaggaccccctaaattcaggcctataagaatt---agtctcgaagaaaagccagccccagatgccattagcgatctcctcgctagtgtagatagcgaggaggtgcgtcagtactgc-agggaacaaggctggatcatccctgaaactcccaccaatgttgagcgtcacctcaatagagcagtattggtaatgcagtccatcgccactgtggttgcagttgtgtctcttgtttatgtcatttataagctgtttgccgggttccagggtgcttactctggagcgcccaagcccattctcaagaagcccgtgttaagaacagccacggtccaagggcccagcttagacttcgccttgtctcttttgaggcgcaacattaggcaagcgcaaactgaccaagggcatttcaccatgttgggagttagggatcgcttagccatcctcccgcgccactcgcaaccagggaagaccatttggattgagcataaactcatcaatgtccttgatgcagttgagttggtggatgagcaagatgtaaacctggaattcaccctcgtcactcttgacactaacgaaaagtttagggatatcaccaaattcatcccagaaaacatcagcactgccagtgatgccaccctagtgatcaacacggagcacatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggtaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacccagtgtattccatgatgtcttcgagggaaataaagaaccagctgtcttgcacagtaaagacccccgactcgaggtagattttgagcatgccctgttctctaagtatgtgggaaatacactatatgagcctgatgagtacatcaaagaggcagcccttcattatgcaaatcaattaaagcaactagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggacgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccctactccacttatgtcaaggacgagctgcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggccagtagtttaaatgattcagtgtacctcagaatggcttttggccatttgtatgaggctttccacgcaaatcctgggacgataactggatcagccgtggggtgcaaccctgacacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgacgctagtctcagccccgtctggttcagagcactagaattggtccttagggagatagggtatagtgaaggagcagtctcactcattgaggggatcaaccacacacaccacgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggatgttcgggaacatccattttcaactcaatgatcaacaacattattatcagagcactgctcataaaaacatttaagggcattgatttggatgaactcaacatggtcgcttatggagatgatgtgctcgccagctaccccttcccaattgattgcttggagttagcaaggactggcaaggagtatggtctaaccatgactcctgcagataagtctccttgctttaatgaagttaattggggtaatgcgaccttcctcaagaggggctttttgcccgatgaacagtttccatttttgatccaccctactatgccaatgagggagatccatgagtccattcgatggaccaaggacgcacgaaacacccaagaccatgtgcggtccttgtgcctcctagcatggcataatggtaagcaagaatatgagaaatttgtgagcacaattaggtctgtcccagtagggagagcgctggctatcccaaattatgaaaatcttagacgcaattggctcgagttatttt-----agaggctatat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ784495.1_Enterovirus_A71_strain_HuzhouE371/2011/CHN_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacttcggtacctttgtgcgcct-g-ttttacaa------ccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgtcatccggctaactacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaaacca-gcggg-tagtgtgtcgtaacgggcaactccgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctctatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagtctgtgact-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaggtgtctacacagcgctctggctctcacgaaaattcaaactcagccactg-agggttccaccataaactacaccaccattaattactataaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatttttactgaaatggcagcgccactgaaatccccgtccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccactatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgccacagcagtggataaaccaacgcgcccggacgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggacgtattaactgaaaccggggtttttgggcaaaatgcacaatttcactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagcaaattccaccaaggtgcactcctagttgctgtcctaccagagtacgtcattggaacagtggcaggcggtacagggacgg------aagacagtcaccccccctataagcagactcagcccggtgccgatggcttcgagttgcaacacccgtacgtgctcgatgcaggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactaccttttgattctgctttgaaccactgtaactttggcctattagttgtgcccattagcccgctagattacgaccaaggagcaacgccagtaatccccataactatcacattggccccaatgtgttctgaattcgcgggtcttaggcaagcagtcacgcaagggttccccactgagctgaaacctggtacaaatcaatttttaaccactgatgatggtgtttcagcacctattctaccaaatttccatcccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattttggaagtcaacaa----------tgtgcccacaaatgctactagctta------atggagaggctgcgctttccggtctcagcacaagcag------ggaagggtgaactgtgtgcggtgttcagagccgatcctgggcgaaatgggccgtggcagtccaccttgctgggtcaattgtgcgggtactacacccaatggtcaggatcactggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcttacacaccgccaggaggccccctgcccaaggaccgggcgaccgccatgctgggcacgcacgttatctgggactttggactgcaatcgtctgttacccttgtgataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgattactacaccacagggttagttagtatatggtatcagacgaattacgtggttccaattggggcgcccaatacagcctatataatagcgctagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagaccggcaccatccagggggataga--------gtggcagatgtaattg---aaagctctat--------------------------aggagatagtgtgagcagagcccttactcaagctctaccagca--------cccacaggccagaacacacaagtgagcagtcatcgactggatacaggtaaagtcccagcactccaagctgctgagattggagcatcgtcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagttttttcagcagagcgggattagttggggagatagatctccctcttgaaggcactac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtggagttattcacctacatgcgctttgatgcagagttcacttttgttgcgtgtacacccactggggaagttgtcccacaattgcttcaatatatgtttgtgccacctggagcccctaagccagattccagggaatctctcgcgtggcaaactgctactaacccctcagtttttgtcaagctgtcagaccctccggcacaggtttcagtaccatttatgtcacctgcgagtgcttaccaatggttctatgacggatatcccacatttggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggaccgtggggacctccaagtccaagtaccctttggtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctgtttaaagccaatccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcaat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcagcagtctggggccatttatgtgggtaactttagagtggtcaatcgccatcttgccacttacaatgattgggcaaatcttgtttgggaagacagctctcgcgatttgctcgtgtcgtccaccaccgcccagggttgtgacacgattgcccgttgtaattgccagacaggggtgtactattgcaactcgaggaggaaacactacccagtcagcttttcaaaacccagcctgatctatgtggaggctagtgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgttgtcggaatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggtgtgtccgactacatcaaa-ggcctcggagatgcttttgggacaggcttcactgatgcagtctcaagggaggttgaagctctcaagaactatcttgtagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactgatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggtagtccttgggcttggattaaagccaaaacagcttctatcttaggtattcccatcgctcaaaagcaaagcgcttcctggctcaagaaattcaatgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagcaagttcatcgattggcttaaagagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgccg-ttactggagaaccagatctcaaacttggaacaatctgctgcttcacaagaagaccttgaagtcatgtttgggaatgtgtcgtatctggccca---------cttctgtcgtaagttccagccgctatacgccacagaagctaaaagagtttatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtccctggctactggtatcattgctcgggcaatcgctgataaataccactctagcgtgtactcacttccaccagacccggatcattttgatggatacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggcaaggatatgtctttattttgtcaaatggtgtctaccgtagac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>HQ423142.1_Human_enterovirus_71_strain_KMM/09_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacttcggtacctttgtgcgcct-g-ttttacaa------ccc---c---cccc-c------ag-t-gaaacttaaaag--------------cagca-aactac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaataaactgc-tcgcgcggttgaaggaaaaaacgttcgttatccggctaactacttcgggaaacc-tagtaacaccatgaaagttgcggaaagcttcgttcagca--ctc-cccca---gtgtaaatcaggtcgatgagccaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacggacatggtgcg-aaaagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaaacca-gcggg-tagtgtgtcgtaacgggcaactccgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacaaagcaattgtt-----taccta----tttatt-ggttttgtgccat-----taacctt--------------gaagtctgtgact-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaggtgtctacacagcgctctggctctcacgaaaattcaaactcagccactg-agggttccaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtttcaagcaggatccagacaagtttgcaaatcctgttaaagacattttttctgaaatggcagcgccactgaaatccccgtccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccactatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggacgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggacgtgttaactgaaaccggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagcaaattccaccaaggtgcactcctagttgctgtcctaccagagtacgtcattggaacagtggcaggcggtacagggacgg------aagacagtcaccccccctataagcagactcagcccggtgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaattatagtgccatacattaacgcactaccttttgattctgctttgaaccactgtaacttcggcctattagttgtgcctattagcccgctagattacgaccaaggagcgacgccagtaatccccataactatcacattggccccaatgtgttctgaattcgcgggtcttaggcaagcagtcacgcaagggttccccaccgagctgaaacctggtacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaatttccatcccaccccgtgtatccatatacctggtgaagttaggaatttgctagagctatgccaggtggagaccattttggaagtcaacaa----------tgtgcccacaaatgctactagctta------atggagaggctgcgctttccggtctcagcacaagcag------ggaagggtgaactgtgtgcggtgttcagagccgaccctgggcgaaatgggccgtggcagtccaccttgctgggtcaattgtgcgggtactacacccaatggtcaggatcactggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcttacacaccgccaggaggccccttgcccaaggaccgggcgaccgccatgctgggcacgcacgtcatctgggactttggactgcaatcgtctgttacccttgtgataccatggatcagcaacactcattacagagcgcatgcccgagatggagtgtttgattactacaccacagggttagttagtatatggtatcagacgaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagaccggcaccatccagggagatagg--------gtggcagatgtaattg---aaagctctat--------------------------aggagatagtgtgagcagagccctcactcaagctctaccagca--------cccacaggccagaacacacaagtgagcagtcatcgactggatacaggtaaagtcccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagttttttcagcagagcgggattagttggggagatagatctccctcttaaaggcacaac-caacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtggagttattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccactggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatctctcgcgtggcaaactgccactaacccctcagtctttgtcaagctgtcagaccctccggcacaggtttcagtaccattcatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataatatgatgggcacgttctcagtgcggaccgtggggacctccaagtccaagtaccctttggtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctgtttaaagccaatccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcagcagtctggggccatttacgtgggtaactttagagtggtcaatcgccatcttgccacttacaatgattgggcaaatctagtttgggaagacagctctcgcgatttgctcgtgtcgtccaccaccgcccagggttgtgacacaattgcccgttgtaattgccagacaggggtgtactattgcaactcgaggaggaaacactacccagtcagtttttcaaaacccagcctgatctatgtggaggctagtgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgttgtcggaatagtgtctactggtggcaatgggctcgttggctttgcagacgtcagggacctcttgtggttggatgaagaagctatggagcagggtgtgtccgactacatcaaa-ggcctcggagatgcttttgggacaggcttcactgatgcagtctcaagggaggttgaagctctcaagaactatcttgtagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactgatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttactgcaaccttggcgctgataggttgtcatggtagtccttgggcttggattaaagccaaaacagcttctatcttaggtatccccatcgctcaaaagcaaagcgcttcctggctcaagaaattcaatgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagtaagttcattgattggcttaaagaaaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgccg-ttactggagaaccagatctcaaacttggaacaatctgctgcctcacaagaagaccttgaagtcatgtttgggaatgtgtcgtatctggccca---------cttctgtcgtaagttccagccgctatacgccacagaagctaaaagagtttatgccctggagaagagaatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcattaggggctcaccaggcactgggaagtccctggctactggtatcattgctcgggcaatcgctgataaataccactctagcgtgtactcgcttccaccagacccggatcattttgatggatacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggcaaggatatgtctttattttgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgttatcgcatctactaatgccagtaacatcatagtgccaacagtgtctgactctgacgctatccgccgcaggttctacatggattgtgacattgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggccggccgccaaactgtgctctgaaaataacactgcaaatttcaaacgctgcagcccattagtgtgtggtaaagccatccaacttagagatagaaaatctaaagttagatacagtgtggacacggtggtttcagaacttattagggaatatagcaataggtccgccattggcaacacaattgaggctctcttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagagaccagctccagacgctattagcgacctcctcgctagtgtagatagtgaagaagtgcgccaatactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatctatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggcgctcccaagcaagtgcttaagaagcctgttcttcgcacagcaacagtacagggcccgagtcttgattttgctctctccctgttaaggaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttggattgagcacaaactcgtgaacatccttgatgcagttgaactggtggacgagcaaggagtcaacctggaattaaccctcatcactcttgacactaacgaaaagtttagggatatcaccaaattcatcccagaaaatgttagcactgccagtgatgccaccctagtgatcaacacggagcatatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggcaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggtagacagggtttttgtgcaggccttaaaaggagttactttgctagtgaacaaggggagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatgggccaacccgcaccaagttggaacccagtgtattccatgatgtcttcgagggaaataaggaaccagctgtcttgcacagcaaagatccccgacttgaggtagattttgagcaggccctgttctctaagtatgtaggaaacacattgcatgagccggatgagtacatcatagaggcagcccttcattatgcaaaccaattgaagcagttaggcattaacacctctcaaatgagcatggaggaagcctgttacggcacagataatcttgaagctattgaccttcacactagtgcaggttacccctacagtgctttgggaataaagaagagggacatcttggatcctaccaccagggatgtgagcaaaatgaaattctacatggacaagtatggtcttgatctcccttactccacctacgtcaaagatgagcttcgttcaatagataagataaagaaagggaagtctcgcctaattgaagctagcagtctgaacgattcagtttacctcagaatggcttttggacacctctatgaaactttccacgcaaaccctggaacgatgactggttcagctgtaggatgtaacccagatgtgttttggagtaagttgccaatcttgctccctggttccctctttgcttttgactactcaggctatgatgctagcctcagtccagtttggtttagagcgctagagcttgtccttagagaggttggctatagtgaggaagcagtctcactcattgaaggaatcaaccacactcatcatgtgtatcgcaacaaaacctattgcgtgctgggtgggatgccctcaggctgttcaggcacatccattttcaactcaatgattaacaacattatcatcagagcactgcttattaaaacatttaagggaattgatttggatgaacttaatatggttgcctacggagatgatgtgcttgccagctacccatttccaattgactgcttagagctagcaaaaacaggcaaagagtatggtctgaccatgactcctgcggacaagtctccttgctttaatgaagttaattggggtaacgcaaccttccttaagagaggctttttgcctgatgaacagttcccgttcttgattcacccaactatgccaatgaaggagatccatgaatctatccggtggaccaaggacgcacgcaacacacaagatcacgtgcgatccttgtgcttgttggcgtggcacaacggtaagcaagaatatgaaaaatttgtaagcacaattagatctgttccagtaggaagagcattggcaattccaaactatgaaaatctgagacgcaattggctcgaattgtttt-----agaggttaaac-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgtacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-attagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC414134.1_Human_enterovirus_71_isolate_JiLin-11-China_complete_genome
------------------tttaaa--cag--ct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacttcggtacctttgtgcgcct-g-ttttataaccc--cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggcaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcccacaaacca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtgccat-----taacctt--------------gaagtctgtgact-acccttaattatatcttgaccctcaacacagctaaa-----tatgggttcgcaggtgtctacacagcgctccggctctcacgaaaattcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaaacaggatccagacaagtttgcaaatcctgttaaagacatttttactgaaatggcagcgccactgaaatccccgtccgctgaggcatgtggatacagtgatcgagtggcgcagctaactattggtaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggacgtctcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggacgtgttaactgaaaccggggtttttgggcaaaacgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggtgcactcctagttgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccctacaagcagactcaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactaccttttgattccgctttgaaccactgtaactttggcctattagttgtgcctattagcccgctagattacgaccaaggagcgacgccagtaatccccataactatcacattggccccaatgtgttctgaattcgcgggtcttaggcaagcagtcacgcaagggttccccaccgagctgaaacctggtacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaatttccatcccaccccgtgtatccatatacctggtgaagttaggaatttgctagagttatgccaggtggagaccattttggaagtcaacaa----------tgtgcccacaaatgctactagctta------atggagaggctgcgctttccggtctcagcacaagcag------ggaagggtgaactgtgtgcggtgttcagagccgatcctgggcgaaatgggccgtggcagtccaccttgctgggtcaattatgcgggtactacacccaatggtcaggatcactggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcttacacaccgccaggaggccccttgcccaaggaccgggcgaccgctatgttgggcacgcacgtcatctgggactttggactgcaatcatccgttacccttgtaataccatggatcagcaacactcattacagagcgcatgcccgggatggagtgtttgattactacaccacagcgttagttagtatatggtatcagacgaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagaccggctccatccagggagatagg--------gtggcagatgtaattg---aaagctctat--------------------------aggagatagtgtgagcagagccctcactcaagctctaccagca--------cccacaggccagaacacacaagtgagcagtcatcgactggatacaggtaaagtcccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagttttttcagcagagcgggattggttggagagatagatctccctcttgaaggcacaac-caacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtggagttattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccactgggcaaattgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcgtggcaaactgccaccaacccctcagtttttgtcaagctgtcagaccctccggcacaggtttcagtaccattcatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttggtggttaggatttatatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctgtttaaagccaatccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcagcagtctggggccatttacgtgggtaactttagagtggtcaatcgccatcttgctacttacaatgattgggcaaatcttgtttgggaagacagctctcgcgatttgctcgtgtcgtccaccaccgcccagggttgtgacacaattgcccgttgtaattgccagacaggggtgtactattgcaactcgaggagaaaacactatccagtcagtttttcaaaacccagtctgatctatgtggaggctagtgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgttgtcggaatagtgtctactggtggtaatgggcttgttggctttgcagatgtcagggacctcttgtggttggatgaagaagctatggagcagggtgtgtccgactacattaaa-ggtctcggagatgcttttgggacaggcttcactgatgcagtctcaagggaggttgaagctctcaagaactatcttgtagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactgatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggtagtccttgggcttggattaaagccaaaacagcttctatcttaggtatccccatcgctcaaaagcaaagcgcttcttggctcaagaaattcaatgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagcaagttcattgattggcttaaagaaaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ttactggagaaccagatctcaaacttggaacaatctgctgcctcacaagaagaccttgaagtcatgtttgggaatgtgacgtatctggccca---------cttctgtcgtaagttccagccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtccctggctactggtatcattgctcgggcaatcgctgacaaataccactctagcgtgtactcgcttccaccagacccggatcattttgatggatacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggcaaggatatgtctttattttgtcaaatggtgtccaccgtagacttcattccgccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgttatcgcatctactaatgccagtaacatcatagtgccaacggtgtctgactctgacgctatccgccgcaggttctacatggattgtgacatcgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagctgccaaactgtgctctgaaaataacactgcaaatttcaaacgctgcagcccattagtgtgtggtaaagccatccaacttagagatagaaaatctaaggttagatacagtgtggatacggtggtttcagaacttattagggaatatagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattagaatt---agccttgaagagaagccaactccagacgctattagcgacctcctcgctagcgtagatagtgaagaagtgcgccaatactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatctatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggcgctcccaagcaagtgcttaagaagcctgttcttcgcacagcaacagtacagggcccgagtcttgattttgctctctccctgttaaggaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagctgttctcccacgtcactcacaacccggcaaaactatttggattgagcacaaactcgtaaacatccttgatgcagttgaactggtggacgagcaaggagtcaacctggaattaaccctcatcactcttgacactaacgaaaagtttagggatattaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcatatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggcaagcctacccatcgcaccatgatgtacaactttcctactaaagcagggcagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggtagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggggagatccagtgggttaagcccaataaagagactggaaggctcaacatcaatgggccatcccgcaccaagttggaacccagtgtattccatgatgtcttcgagggaaataaggaaccagctgtcttacacagcaaagatccccgacttgaggtagattttgagcaggccctgttctctaagtatgtaggaaacacattgcatgagccggatgagtacatcatagaggcagcccttcattatgcaaaccaattgaagcagttagacatagacacctctcaaatgagcatggaggaagcctgttatggcacagacaatcttgaagctattgaccttcatactagtgcaggctacccctacagtgctttgggaataaagaagagggacatcttggatcctaccaccagagatgtgagcaaaatgaaattctacatggacaagtatggtcttgatctcccttactccacctacgtcaaagatgagcttcgttcaatagataagataaagaagggaaagtctcgcctaattgaagctagcagtctgaacgattcggtttacctcagaatggcttttggacacctctatgaaactttccatgcaaaccctggaactgtgactggttcagctgtaggatgcaacccagatgtgttttggagtaagttgccaatcttgctccctggttccctctttgcttttgactactcaggctatgatgctagcctcagtccagtttggtttagagcgttagagcttgtccttagagaggttggctatagtgaggaagcagtctcgctcattgaaggaatcaaccacactcatcatgtgtatcgcaacaaaacctattgcgtgctgggtgggatgccctcaggctgttcaggcacatccattttcaactcaatgattaacaacattatcatcagagcactgcttattaaaacatttaagggaattgatttggatgaacttaatatggttgcctacggagatgatgtgcttgccagttacccatttccaattgactgcttagagctagcaaaaacaggcaaagagtatggtctgaccatgactcctgcggacaagtctccttgctttaatgaagttaattgggagaacgcaaccttccttaagagaggtttcttgcctgatgaacagttcccgttcttgattcacccaatcatgccaatgaaggagatccatgaatctatccggtggaccaaggacgcacgcaacacacaagatcacgtgcgatccttgtgcttgttggcgtggcacaacggtaagcaagaatatgaaaaatttgtaagcacaattagatctgttccagtaggaaaggcattggcaattccaaactatgaaaacctgagacgcaattggctcgaattgtttt-----agaggttaaac-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgtacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ423143.1_Human_enterovirus_71_strain_KM186/09_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacttcggtacctttgtgcgcct-g-ttttataa------ccc---c---cccc-c------ag-t-gaaatttaaaag--------------cagca-aacccc-gatcaa-tagcaggcataacgctccatttttgttttga-tcaaccatttttg-tttccccggaccgagtatcaataaactgc-tcgcggggttaaaggaaaaaactttcgttttccggttaattacttcgggaaacc-tagtaaccccatgaaatttgcgaaaagtttctttcacca--ctc-cccca---gggtaaatcaggtcaataagtccccgca-ttccccacgggcaaccggggggggggctgctttgggggcctgcccat--------ggggcaa-cccagggggcgctctaatacggacatggggca-aaaagtctactgagctatttagtattcctccggcccctgaatgcggttaatcctaactgcggagcacacccccacaaacca-gcggg-tagggggtcgaaacgggcaactctgcagcgaaaccaactacttggggtgtccgggttccc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtgccat-----taacctt--------------gaagtctgtgact-acccttaattatatcttgaccctcaacacagctaaa-----tatgggttcgcaggtgtctacacagcgctccggctctcacgaaaattcaaactcagccactg-agggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaaacaggatccagacaagtttgcaaatcctgttaaagacatttttactgaaatggcagcgccactgaaatccccgtccgctgaggcatgtggatacagtgatcgagtggcgcagttaactattggtaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggacgtctcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggacgtgttaactgaaaccggggtttttgggcaaaacgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggtgcactcctagttgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccctacaagcagactcaacccggtgccgatggcttcgagctgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactaccttttgattccgctttgaaccactgtaactttggcctattagttgtgcctattagcccgctagattacgaccaaggagcgacgccagtaatccccataactatcacattggccccaatgtgttctgaattcgcgggtcttaggcaagcagtcacgcaagggttccccaccgagctgaaacctggtacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaatttccatcccaccccgtgtatccatatacctggtgaagttaggaatttgctagagttatgccaggtggagaccattttggaagtcaacaa----------tgtgcccacaaatgctactagctta------atggagaggctgcgctttccggtctcagcacaagcag------ggaagggtgaactgtgtgcggtgttcagagccgatcctgggcgaaatgggccgtggcagtccaccttgctgggtcaattatgcgggtactacacccaatggtcaggatcactggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcttacacaccgccaggaggccccttgcccaaggaccgggcgaccgctatgttgggcacgcacgtcatctgggactttggactgcaatcatccgttacccttgtaataccatggatcagcaacactcattacagagcgcatgcccgggatggagtgtttgattactacaccacagggttagttagtatatggtatcagacgaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagttgtgcaaggatgctagtgatatcctgcagaccggctccatccagggagatagg--------gtggcagatgtaattg---aaagctctat--------------------------aggagatagtgtgagcagagccctcactcaagctctaccagca--------cccacaggccagaacacacaagtgagcagtcatcgactggatacaggtaaagtcccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagttttttcagcagagcgggattggttggagagatagatctccctcttgaaggcacaac-caacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtaggaaggtggagttattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcgtggcaaactgccaccaacccctcagtttttgtcaagctgtcagaccctccggcacaggtttcagtaccattcatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttggtggttaggatttatatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctgtttaaagccaatccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcagcagtctggggccatttacgtgggtaactttagagtggtcaatcgccatcttgctacttacaatgattgggcaaatcttgtttgggaagacagctctcgcgatttgctcgtgtcgtccaccaccgcccagggttgtgacacaattgcccgttgtaattgccagacaggggtgtactattgcaactcgaggagaaaacactatccagtcagtttttcaaaacccagcttgatctatgtggaggctagtgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgttgtcggaatagtgtctactggtggtaatgggcttgttggctttgcagatgtcagggacctcttgtggttggatgaagaagctatggagcagggtgtgtccgactacattaaa-ggtctcggagatgcttttgggacaggcttcactgatgcagtctcaagggaggttgaagctctcaagaactatcttgtagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactgatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggtagtccttgggcttggattaaagccaaaacagcttctatcttaggtatccccatcgctcaaaagcaaagcgcttcttggctcaagaaattcaatgacatggccaacgctgctaaggggttagagtgggtttccaataagatcagcaagttcattgattggcttaaagaaaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ttactggagaaccagatctcaaacttggaacaatctgctgcctcacaagaagaccttgaagtcatgtttgggaatgtgacgtatctggccca---------cttctgtcgtaagttccagccgctatacgccacggaagctaaaagagtttatgccctggagaagaggatgaataactatatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtccctggctactggtatcattgctcgggcaatcgctgacaaataccactctagcgtgtactcgcttccaccagacccggatcattttgatggatacaagcaacaggtggttacagtgatggatgatttgtgtcaaaaccccgacggcaaggatatgtctttattttgtcaaatggtgtccaccgtagacttcattccgccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgttatcgcatctactaatgccagtaacatcatagtgccaacggtgtctgactctgacgctatccgccgcaggttctacatggattgtgacatcgaagtgacagactcgtacaaaacagatctaggtagactggatgcagggcgagctgccaaactgtgctctgaaaataacactgcaaatttcaaacgctgcagcccattagtgtgtggtaaagccatccaacttagagatagaaaatctaaagttagatacagtgtggatacggtggtttcagaacttattagggaatatagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggatt---agccttgaagagaagccaactccagacgctattagcgacctcctcgctagcgtagatagtgaagaagtgcgccaatactgc-agggatcaaggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcggtgcttgtcatgcaatctatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtattctggcgctcccaagcaagtgcttaagaagcctgttcttcgcacagcaacagtacagggcccgagtcttgattttgctctctccctgttaaggaggaacatcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgtttagctgttctcccacgtcactcacaacccggcaaaactatttggattgagcacaaactcgtaaacatccttgatgcagttgaactggtggacgagcaaggagtcaacctggaattaaccctcatcactcttgacactaacgaaaagtttagggatattaccaaattcatcccagaaaatattagcactgccagtgatgccaccctagtgatcaacacggagcatatgccctcaatgtttgtcccggtgggtgacgttgtgcagtatggcttcttgaatctcagtggcaagcctacccatcgcaccatgatgtacaactttcctactaaagcgggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggtggcaatggtagacagggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggggagatccagtgggttaagcccaataaagagactggaaggctcaacatcaatgggccatcccgcaccaagttggaacccagtgtattccatgatgtcttcgagggaaataaggaaccagctgtcttacacagcaaagatccccgacttgaggtagattttgagcaggccctgttctctaagtatgtgggaaacacattgcatgagccggatgagtacatcatagaggcagcccttcattatgcaaaccaattgaagcagttagacattaacacctctcaaatgagcatggaggaagcgtgttatggcacagacaatcttgaagctattgaccttcatactagtgcaggctacccctacagtgctttgggaataaagaagagggacatcttggatcctaccaccagagatgtgagcaaaatgaaattctacatggacaagtatggtcttgatctcccttactccacctacgtcaaagatgagcttcgttcaatagataagataaagaaagggaaatctcgcctaattgaagctagcagtctgaacgattcagtttacctcagaatggcttttggacacctctatgaaactttccatgcaaaccctggaacgatgactggttcagctgtaggatgcaacccagatgtgttttggagtaagttgccaatcttgctccctggttccctctttgcttttgactactcaggctatgatgctagcctcagtccagtttggtttagagcgttagagcttgtccttagagaggttggctatagtgaggaagcagtctcgctcattgaaggaatcaaccacactcatcatgtgtatcgcaacaaaacctattgcgtgctgggtgggatgccctcaggctgttcaggcacatccattttcaactcaatgattaacaacattatcatcagagcactgcttattaaaacatttaagggaattgatttggatgaacttaatatggttgcctacggagatgatgtgcttgccagttacccatttccaattgactgcttagagctagcaaaaacaggcaaagagtatggtctgaccatgactcttgcggacaagtctccttgctttaatgaagttaattggggtaacgcaaccttccttaagagaggctttttgcctgatgaacagttcccgttcttgattcacccaactatgccaatgaaggagatccatgaatctatccggtggaccaaggacgcacgcaacacacaagatcacgtgcgatccttgtgcttgttggcgtggcacaacggtaagcaagaatatgaaaaatttgtaagcacaattagatctgttccagtaggaagagcattggcaattccaaactatgaaaacctgagacgcaattggctcgaattgtttt-----agaggttaaac-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgtacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308450.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/367/2012_complete_genome
---------------------------------------------acccactcaca-gggcccac-c-gggcgcaagcactctggtaccccggtacctttgtgcgcct-g-ttttata------ctcc---c---cccc-t------aa-t-gaaacttagaag--------------cagca-aatcac-gatcaa-tagcaggcataacactccagttatgtcttga-tcaagcacatctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgtccgttacccggctaactacttcgggaaacc-tagtaacaccatggaagttgcggagagcttcgctcagca--ctc-cccca---gtgtagatcaggccgatgagtcaccgca-ttccccacgggtgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacgactaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgtaacagagcaattgtt-----taccta----tttatt-ggttttgtgccac-----taacctt--------------gaagtctgtgatt-accctcaattatatcttgaccctcaatacagctaaa-----catgggttcacaggtgtctacacagcgctccggttctcacgaaaactcaaactcggccactg-agggctccactataaactacaccactattaattactacaaagactcctatgctgccacggcaggcaaacagagccttaagcaggatccagacaagtttgcaaatcctgttaaagatatctttactgaaatggcagcaccattgaaatccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacacgcccggatgtttcagtgaacaggttttatacattggacactaaattgtgggagaaat------------------catccaagggatggtactggaagttcccggatgtgttaactgagaccggggtttttgggcaaaatgcacaattccactatctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagttgctatcctaccagagtacgtcattgggacagtggcgggcggtacagggacgg------aagacagtcaccccccttacaagcaaactcaacccggcgccgatggcttcgaattgcaacatccatacgtgcttgatgccggcatcccaatatcccagttaacagtgtgcccacaccagtggattaacttgaggaccaataactgtgctacaataatagtgccatacattaatgcactaccctttgactctgctttaaaccactgtaactttggcctattagttgtgcctattagcccactagattatgaccaaggagcgacgccagtaatccctataaccatcacattggccccaatgtgctccgaattcgcaggccttaggcaagcagtcacacaaggatttcccaccgagctgaaacctggtacaaatcaattcctaaccaccgatgacggtgtttcggcacctatcctaccaaatttccatcccaccccgtgtatccatatacctggtgaagttaggaacttgctagagctatgccaggtggagaccattttagaggtcaacaa----------tgtgcccacaaatgccactagctta------atggagaggctgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaaatgggccgtggcagtccaccttgctgggtcaattgtgcgggtactacactcaatggtcaggatcattagaagtcaccttcatgtttactggatccttcatggccaccggtaagatgcttatagcctatacaccgccaggaggccccttgcccaaggaccgggcgaccgctatgttaggcacgcacgtcatttgggattttgggctgcaatcatctgttacccttgtaataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgactattacaccacagggttagtcagtatatggtatcaaacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccagaagaacttcactatgaagttgtgcaaggatgccagtgatatcctgcagacaggcaccatccagggagatagg--------gtggcggatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagccctaactcaagctctaccagca--------cccacaggccagaatacacaagtaagcagtcatcgattggacacaggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacgcgctgtgttctcaactcgcacagcacagccgagactactcttgatagtttcttcagtagagcaggattagttggagagatagatctccctctagaaggcacaac-taacccaaatggttatgccaactgggacattgatataacgggttacgcgcaaatgcgtaggaaggtggagctattcacctacatgcgctttgatgcagagttcactttcgttgcgtgcacacccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattccagggagtccctcgcatggcaaactgccaccaacccctcagtttttgtcaagttgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttaccaatggttttatgacgggtatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaacaacatgatgggcacgttctcagtgcggactgtagggacctctaagtccaagtacccgttagtggttagaatttacatgagaatgaagcacgtcagggcatggatacctcgcccgatgcgcaaccaaaactacctatttaaagccaacccaaattatgctggcaa----ctccattaagccaactggcaccagtcgcacagcgat---cactac---------------------------------------ccttggg------------------------------------------aaatttgggcagcagtctggggccatttatgtgggcaactttagagtggtcaaccgccatcttgccacccacaatgattgggcgaatcttgtttgggaggacagctctcgtgacttgctcgtgtcatccaccaccgcccaaggctgtgatacgattgcccgttgcaattgccagacgggggtgtactattgcaactcgaggagaaaacactacccagtcagcttttctaaacccagcctgatctatgtagaggctagcgagtactacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggcatccttagatgccaacatggcgtcgtcggtatagtatctaccggtggtaacgggctcgttggctttgcggacgtcagggaccttttgtggttggatgaggaagctatggagcagggcgtgtctgactacattaag-ggtctcggagatgcattcgggacaggcttcactgatgcagtctcaagggaggttgaagctcttaagaactacctcataggatctgaaggagcagttgagagagttttaaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattacgacatggtcacccttactgcaaccctagcgctgataggctgccatggcagtccttgggcttggattaaagccaaaacagcatctatcttaggtatccctatcgctcaaaaccaaagtgcttcctggctcaagaaattcaatgatatggccaatgctgctaagggattagagtgggtttccaataagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ttgctagagaatcagatctcaaacttagaacaatctgctgcctcacaagaggatcttgaagtcatgtttgggaatgtgtcatacctagctca---------cttctgtcgcaagttccaaccgctatacgccacggaagctaaaagagtttatgccctggagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcattaggggctcaccaggcacaggtaagtctctagcaacaggcatcatcgcccgtgcaatagcagataaatatcactccagtgtgtactcactcccaccagatcccgatcactttgatggctataagcagcaagtggtcactgtcatggatgacctatgccaaaaccctgacggcaaggacatgtcgttgttctgccaaatggtgtccactgtcgacttcatcccaccgatggcttccctcgaggagaaaggagtctctttcacatccaaatttgtcatcgcatccaccaatgctagcaacatcatagtgccgacagtgtctgattctgatgccatccgccggagattttacatggattgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgctgggcgggccgccaaactgtgctccgagaataatactgcaaacttcaaacgttgcagccccctagtatgtggaaaggctatccagctcagagataggaaatctaaagttagatatagtgtggacactgtggtctctgagctgatcagggagtacagtaacaggtccgctattggtaacacgattgaagctttgtttcaaggtccacctaaatttagacccgtaagaatc---agcctggaagagagaccagccccagacgccattagcgaccttctagctagtgtggatagtgaagaggtgcgccagtactgc-agagatcaagggtggataattccagaaacccctactaatgttgagcgccaccttaacagagcggtgctggtcatgcaatcaattgctacagtggtggctgtcgtctcactagtgtatgtcatttacaagctctttgcaggattccagggtgcatactctggtgctcctaagcaggcactcaaaaagcctgtcctgcgcacagcaacagtacaaggtccaagtcttgactttgctctttctctactacggaggaacattagacaagttcagacggatcaggggcattttaccatgctgggcgtcagagaccgcttagctgttctcccacgacactcgcaacccggaaagacaatctggatggagcacaagcttgtgaatgtgttggatgctgttgagttagtggatgagcaaggggttaatttggagttaactttaattactcttgatatcaatgaaaagttcagagacatcaccaaatttatcccagagggtatcagtgctgctagtgatgccactttagtgatcaacacagaacacatgccctcaatgtttgtgccggtgggtgatgtcgtgcagtatggtttcctaaatctcagtggaaagccaactcaccgcactatgatgtacaatttccctacaaaggctggtcagtgtggaggagtagttacatcagttggaaaggtcattggtattcacataggaggtaatggcagacagggtttttgtgcagggcttaagagaagctactttgctagtgagcaaggggagatccaatgggtcaaacctaataaagaaacagggaggcttaacattaacgggccaatccgcactaagcttgaacctagtgtgttccatgacgtctttgagggcaacaaggagccagcggtcttgcatagtaaggatcctcgtcttgaggtggatttcgagcaggcgttgttctctaagtatgtggggaacacactccatgagcctgatgagtacatcagagaggcggccctccactatgcaaatcagttgaaacaactggacatagacaccacccagatgagtatggaagaggcgtgctatggcacaagtaaccttgaagctattgaccttcacactagtgcaggttatccttacagtgctctgggaataaaaaagagagatattttagaccctaccaccagagatgtgagtaagatgaagttctacatggataagtatggccttgaccttccatattccacctatgtcaaagacgagcttcgctcgatggataagatcaagaaagggaaatctcgactgattgaggccagcagtttaaatgactcggtctatctcaggatggcattcgggcatctctatgaaactttccatgcaaaccctgggacagtgaccggctcggctgtgggatgcaacccagatgtgttttggagcaagctaccaattctgctccctggttccctctttgcttttgactattcaggctatgatgctagcctcagtccagtttggttcagagcattggaactagtacttagagagattggctacagtgaggaggcggtctcgctcattgaagggatcaaccacacgcaccatgtatatcgcaataaaacttattgcgtgcttggtgggatgccctcgggttgttcaggaacatccatcttcaattcaatgatcaataatattatcatcagagcattactcattaaaacattcaagggtatcgatttagacgaactcaacatggttgcctatggggacgatgtgctcgctagttaccctttcccaattgattgcctagaactggcaagaacaggtaaggagtatggtctgaccatgacccctgcggataagtccccgtgttttaatgaagttaattgggaaaacgcaacttttctcaagaggggtttcctgcctgatgatcaattcccattcttgattcaccctaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgtaacactcaagatcacgtgagatccctatgcctgttggcgtggcacaatggtaagcaagaatatgaaaaatttgtgagcacaattagatctgttccagtaggaaaagcattggcaattcctaactatgaaaatctgagacgcaattggctcgaattatttt-----agaggttaaac-------------------------acac---------------ctcaaccc-caccggaa----atctggt------c-g-----tgaacat-a-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JF799986.1_Human_enterovirus_71_strain_Guangdong_2009_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------c-cc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagactgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattattacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaggacatcttcactgagatggcagcgccactgaagtccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgctaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctgccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttacaagcagactcaacctggtgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgcgctacaataatagtgccatacatcaacgcactgccttttgattctgccttgaaccattgcaacttcggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccatatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgaccctgggcgaaatggaccgtggcagtccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccaccaggaggccctttgcccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactatagagcgcatgcccgagatggagtgtttgactactataccacagggttagtcagtatatggtatcagacgaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaagctgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagtagagccctcactcaagctctaccagca--------cccacaggccagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttaaaggcacaac-taacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccactggggaagttgtcccacaattgctccaatacatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgtcagggcgtggatacctcgtccgatgcgtaaccaaaactacctattcaaagccaacccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttgga------------------------------------------aaatttgggcaacagtctggggccatttatgtgggtaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaagcccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgtcaacatggcgtcgtcggtatagtgtctactggtggcaacgggctcgttggctttgcagatgtcagggacctcttgtggttagatgaagaagccatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgacgcagtctcaagggaggttgaagctctcaagaactatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcagaagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggcatccctatcgctcaaaagcaaagcgcttcctggcttaagaaattcaatgacatggccaatgctgctaagggattggaatggatttctaacaaaattagtaaattcatcgattggctcaaagaaaaaatcataccagcagccagggagaaggttgagttcctaaacaacttgaaacagttacct-ctactagagaaccagatctcaaacctagagcaatctgctgcctcacaagaagatcttgaagccatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaattccagccactgtacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcaggggctcaccaggcacagggaagtctctagcaacaggcatcatcgcccgtgcgatagctgataaatatcactctagtgtgtactcactcccaccagaccctgaccactttgatggctataagcagcaagtggtcactgtcatggatgacctatgtcaaaaccctgacggtaaggacatgtcactgttctgccaaatggtgtccaccgtcgacttcatcccaccaatggcttccctcgaggagaaaggggtctctttcacatccaaatttgttatcgcatccaccaatgctagtaacatcatagtgccaacagtgtccgattccgatgccatccgccgtagattttacatggattgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgctgggcgggccgccaaactgtgctctgaaaataacaccgcaaacttcaaacgttgcagccccctagtatgtggaaaggctatccagctcagggacaggaaatctaaagttaggtacagcgtggacactgtggtctctgagttgattagggagtacaataacaggtctgccattggtaacacgattgaagctttgtttcaaggtccacctaagttcagacccgtaagaatt---agcctggaagagaggccagccccagacgccattagtgaccttctagctagtgtggatagtgaagaagtgcgccagtactgt-agagaccaagggtggataatcccagaaacccctactaatgttgagcgccaccttaatagagcagtgctagtcatgcaatcaattgctacagtggtagctgtcgtctcactagtgtatgtcatctacaagctctttgcaggattccagggtgcatattctggtgctcctaagctggcactcaagaagcctgtcctgcgcacagcaacggtgcaaggtccaagtcttgactttgctctttctctactaaggaggaacattagacaagttcagacggatcaggggcatttcaccatgctgggcgtcagagaccgcttggctgttctcccacgacactcgcagcccggaaagacaatctgggtggagcacaagcttgtgaacgtgctggatgctgttgagttagtggatgagcaaggggtcaatttggagttaactttgattactcttgacaccaatgaaaagttcagagacatcaccaaattcatcccagaaagtatcagtgctgctagcgacgccactttagtgatcaacacagaacacatgccctcaatgtttgtgccagtgggcgatgtcgtgcagtatggtttcctaaatctcagtggaaagccaactcaccgcactatgatgtacaatttccccacaaaggcaggtcagtgtggaggagtagtcacatcagttggaaaggtcattggtattcacataggaggtaatggcaggcagggtttttgtgcaggactcaagagaagctactttgctagtgaacaaggggagatccaatgggttaaacctaataaagaaacaggaaggcttaacatcaatgggccaacccgcactaagcttgaacctagtgtgttccatgacgtctttgagggcaacaaggagccagcggtcttgcatagtaaggaccctcgccttgaggtggatttcgagcaggcgttgttctctaagtatgtggggaacacactccatgagcctgatgagtacatcagagaggcagccctccactatgcaaatcagttgaaacagctggacatagacaccacccagatgagcatggaggaggcttgttatggcacagataaccttgaagctatcgaccttcacactagcgcaggttatccttacagtgctctgggaataaagaagagagatattttagaccctactaccagagatgtgagtaggatgaagttctacatggacaagtatggtcttgaccttccatwttccacctatgtcaaagacgagcttcgctcgatagacaagatcaagaaaggcaaatctcgtctgatcgaggccagcagtttgaatgactcggtctatctcaggatggctttcgggcacctctatgaaactttccatgcaaaccctgggactgtgactggctcggctgtggggtgcaacccagatgtgttttggagcaagctaccaattctgctccctggttccctctttgcctttgactattcaggctatgatgctagcctcagcccagtttggtttagagcactggaattagtccttagagagataggctatagtgaggaggcggtctcgctcattgaagggatcaaccacacgcaccatgtatatcgcaacaaaacttattgcgtgcttggtgggatgccctcgggttgttcaggaacatccatcttcaattcaatgatcaataatattatcatcagagcactactcatcaagacattcaagggtattgatttagatgaactcaacatggttgcctacggggacgatgtgctcgctagttaccctttcccaattgactgcctagaactagcaagaacaggtaaggagtatggtctgaccatgacccctgcagataagtccccgtgcttcaatgaagttaattgggaaaatgcaacctttctcaagaggggtttcctgcctgatgatcaatttccattcttgattcaccctaccatgccaatgaaggagattcatgagtccattcgatggaccaaagatgcgcgtaatactcaagatcacgtgcgatccctatgcctgttggcgtggcacaacggcaaacaagagtatgaaaagtttgtgagcacaattagatctgtcccagtaggaaaagcattggcaattcccaattacgaaaatctgagacgcaattggctcgaattatttt-----agaggttaaac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JF738002.1_Human_enterovirus_71_isolate_THA-EV71-044_complete_genome
------------------------------------------------------------------------------------------------------------------------------------------------------------cttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagggcttcgttcagca--ctc-cccca---gtgtagatcaggccgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgtaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagactgtgacc-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcgcaggtgtccacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccactataaactacaccaccattaattattacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaggacatcttcactgaaatggcagcaccactgaaatccccatccgctgaggcatgtggatacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagttggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttatacattggacactaaattgtgggagaaat------------------cgtccaagagttggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttttgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcttagttgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttacaagcaaactcaacccggtgccgatggcttcgagttgcaacacccatacgtacttgatgccggcatcccaatatcacagttaacagtgtgcccacaccaatggattaatttgagaaccaacaactgtgctacaataatagtaccatacatcaatgcactgccttttgattctgccttgaaccactgtaactttggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgctctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctgaaacctggcacaaatcaatttctgaccactgatgatggcgtttcagcacctattctaccaaatttccaccccaccccttgtatccatatacctggtgaagttaggaacttgctggagttatgccaggtggagaccattctggaggttaacaa----------cgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcagtgttcagagccgaccctgggcgaaatggaccgtggcagtccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaaaatgctcatagcctatacaccgccaggaggccctttgcccaaagaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactatagagcgcatgcccgagatggagtgtttgactactacaccacagggctagtcagtatatggtatcagacgaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagtgtgagcagagccctcactcaagctctaccagca--------cccacaggccagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgagattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcacacagcacagctgagactactcttgatagtttcttcagtagagcgggattagttggagagatagatctccctcttgaaggcacaac-taatccaaatggctatgccaactgggacatagacataacaggttacgcgcaaatgcgtaggaaggtggagctattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccacagggcaagttgtcccacaattgctccaatacatgtttgtgccacctggagcccctaagccagattccagggagtccctcgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcgcctgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgttagggcgtggatacctcgcccgatgcgtaaccaaaactacctattcaaagccaatccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttgga------------------------------------------aaatttgggcagcagtctggggccatttacgtgggtaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttactcgtgtcatccaccaccgcccaaggctgtgacacgattgcccgttgcaattgccagacaggggtgtactattgcaactcgaggagaaaacactacccagttagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggtatagtgtcaaccggtggcaacgggctcgttggctttgcggacgtcagggacctcttatggttggatgaggaagctatggagcagggtgtgtccgactacatcaag-ggtctcggagatgcattcgggacaggcttcactgatgcagtctcaagggaggttgaagctcttaagagctatcttataggatctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcaggagcgattacgacatggtcacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagtgcttcctggctcaagaagttcaatgatatggccaatgctgctaagggattagagtgggtttccaacaagatcagcaagtttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaaatcatgtttgggaatgtgtcatacctagccca---------cttctgtcgcaagttccaacctctatacgccacggaagctaaaagagtttatgccctggagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcattaggggctcgccaggcacagggaagtctctagccactggcatcatcgcccgtgcgatagctgataaatatcactctagtgtgtactcacttccaccagacccagatcattttgacggttacaagcaacaggtggttactgtcatggatgacttatgccaaaaccccgatggcaaggacatgtcactgttctgccaaatggtgtccactgtcgac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>FJ607337.1_Human_enterovirus_71_strain_121/SHENZHEN/08/China/HFMD_Fatal/2008_complete_genome
-------------------ttaaa--aca-gct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c------ag-t-gaaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcgggaaacc-tagtaacaccatgaaagttgcggagggcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccag--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaagactgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaggtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccaccataaactacaccaccattaattattacaaagactcctatgctgctacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaggacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgcggatacagtgatcgagtggcgcaattaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagagttggtactggaagttcccggatgtgctaactgaaactggggtttttgggcaaaatgcacaatttcactacctctaccgatcagggttttgtattcacgtgcagtgcaatgctagtaaattccaccaaggagcactcttagttgctgtcctaccagagtacgtcattgggacagtggcaggcggtacagggacgg------aagacagtcaccccccttacaagcagactcaacctggtgccgatggcttcgagttgcaacacccgtacgtacttgatgccggcatcccaatatcacagttaacagtgtgcccacaccaatggattaatttgagaaccaacaactgcgctacaataatagtaccatacatcaatgcactgccttttgattctgccttgaaccattgcaactttggcctattagttgtgcctattagcccactagattacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgctctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccaccgagctgaaacctggcacaaatcaatttctgaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccttgtatccatatacctggtgaagttaggaacttgctggagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcacaagcag------ggaaaggtgagctgtgtgcagtgttcagagccgaccctgggcgaaatggaccgtggcagtccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggtaagatgctcatagcctatacaccgccaggaggccctttgcccaaagaccgggcgaccgccatgttgggcacgcacgtcatctgggattttgggctgcaatcgtctgttacccttgtgataccatggatcagcaacactcactatagagcgcacgctcgagatggagtgtttgattactacaccacagggctagtcagtatatggtatcagacgaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcaagctctaccagcg--------cccacaggccagaatacacaggtgagcagtcatcgactggatacaggcaaggttccagcactccaagctgctgagattggagcatcatcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcacacagcacagctgagaccactcttgatagtttcttcagcagagcgggattagttggagagatagatctccctcttgaaggcacaac-taatccaaatggctatgccaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggagctgttcacctacatgcgctttgatgcggagttcacttttgttgcgtgcacacccacagggcaagttgtcccacaattgctccaatacatgtttgtgccacctggagcccctaagccagattccagggaatccctcgcatggcaaaccgccaccaacccctcagtttttgtcaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatatggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtagggacctccaagtccaagtaccctttagtggttaggatttacatgagaatgaagcacgttagggcgtggatacctcgcccgatgcgtaaccaaaactacctattcaaagccaatccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttgga------------------------------------------aaatttgggcaacagtctggggccatttatgtgggtaactttagagtggtcaaccgtcatcttgccactcacaatgattgggcaaatcttgtttgggaagacagctctcgcgacttactcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgctgcaattgccagacaggggtgtactactgtaactcgaggagaaaacactacccagtcagtttttcaaaacccagcctgatctatgtagaggctagcgagtattacccagccaggtaccagtcacatcttatgctcgcacagggccactcagaacctggtgattgcggtggtatccttagatgccaacacggcgtcgtcggtatagtgtcaactggtggcaacgggctcgttggctttgcagacgtcagggacctcttgtggttagatgaagaagctatggagcagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtctcaagggaggttgaagctctcaagagttatcttatagggtctgaaggagcagttgagaaaattttgaaaaatcttattaaactaatctctgcactggtgattgtaatcaggagtgattacgacatggttacccttactgcaaccttagcgctgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaagcaaagtgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggttggagtgggtttccaacaagatcagcaagtttattgattggcttaaggagaaaatagtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttgcca-ctgctagaaaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaagttatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctatacgctacggaagctaaaagagtctacgccctggagaagagaatgaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaatcgctgataagtaccactctagcgtgtactcgcttccaccagacccagatcattttgacggttacaagcaacaggtggttacagtgatggatgacttgtgtcaaaaccccgacggcaaggatatgtctttattctgtcaaatggtatccactgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccaccaacatcatagtgccaacagtgtctgattctgacgctattcgccgcaggttctacatggattgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaacttcaaacgttgcagcccattagtgtgtgggaaagctatccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtagtttcagaacttattagggaatacagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccgcccaaattcaggccaattaggatt---agtcttgaagagaaaccagccccagacgctattagcgatctccttgctagtgtagatagtgaagaagtacgccagtactgc-agggatcagggctggatcattcctgaaactcccaccaacgtagagcggcaccttaatagagcagtgcttgtcatgcaatctatcgccacagtagtggcggttgtctcgttggtgtatgtcatctacaagctctttgcagggtttcagggtgcgtactctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgattttgctctctccctactgaggaggaacgtcaggcaagtccaaacagaccaggggcatttcaccatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacccggcaaaactatttggattgagcacaaactcgtgaacgtccttgatgcagttgaattggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgataccaacgagaagtttagggatatcaccaaattcatcccggaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccctcgatgtttgtcccggtgggtgacgttgtgcagtatggtttcctgaatctcagtggtaagcctactcatcgcaccatgatgtacaactttcctactaaggcagggcaatgtggaggggtggtgacatcagttggaaaagtcatcggtatacacataggtggcaacggtagacaaggattttgtgcaggtcttaagagaagctactttgccagcgagcaaggagagatccaatgggttaaacccaataaagaaactgggaggcttaacatcaacggaccaacccgcaccaagctcgagcctagtgtgttccatgatgtctttgagggcagcaaggagccagcagtcttacatagcaaagaccctcgccttgaggtagatttcgagcaggcgttgttttctaagtacgtaggaaacacactacatgagcctgatgagtacatcagagaggcagcccttcactatgcgaaccagttgaagcaactggatatagacaccactcaaatgagcatggaggaagcttgctacggcacagataaccttgaggctattgatcttcatactagtgcaggctacccctacagtgccctgggaataaagaagagagatattttagaccctaccactagagatgtgagcaaaatgaagttttatatggataaatatggtcttgatctcccttactccacctatgtcaaagacgaacttcgctcgatagataaaatcaagaaagggaaatcccgactgattgaggccagcagtttgaatgattcagtttacctcagaatggcttttggacacctttatgaaactttccatgcaaaccctgggactgtgactggctcagctgtggggtgtaacccagatgtgttttggagtaagctaccaatcctgctccctggttccctctttgcctttgactactcaggttatgatgctagtctcagcccagtttggtttagagcactggagttggtccttagagagataggctatagtgaagaggcggtctcgcttattgaaggaatcaaccacacacaccacgtgtaccgcaacaaaacctattgcgtgcttggtggaatgccctcaggttgctcaggaacatccatctttaactcaatgattaataacatcatcatcagagcattacttattaaaacattcaagggcattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcaaaaacaggtaaggagtatggtctaaccatgacccctgcagacaagtccccttgcttcaatgaagttaattgggaaaacgcaaccttcctcaagagaggcttcttgcctgatgagcaattcccgtttttgatccaccctaccatgccaatgaaggaaattcatgaatccattcggtggaccaaggatgcacgcaatactcaagatcacgtgcgatccctatgtctattggcatggcataacggtaagcaagaatatgaaaaatttgtgagctcaattagatccgtcccaataggaaaagcattggcaattcccaactatgaaaacctgagacgtaattggctcgaattgtttt-----agaggtcgaac-------------------------aaac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgaaaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AF302996.1_Enterovirus_71_strain_SHZH98_polyprotein_gene_complete_cds
------------------ttaaaa--cag--ct-gtgggttgtc-acccacccaca-gggtccac-t-gggcgctagcactctggtacctcggtacctttgtgcgcct-g-ttttata------cccc---c---cccc-c-----agttt-gaaacttagaag--------------cagcgcaaacca-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgcg-aaaaatctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgccctcaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgtaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------aaagtctgtg----acccttaattatatcttgaccctcaacacagcaaaac----catgggttcacaggtgtccacacagcgctccggttctcacgaaaattcaaactcagccactg-agggttccaccataaactacactaccattaattactacaaagactcgtatgctgccacagcaggcaagcagagtctcaagcaggatccagacaaatttgcaaatcctgttaaagacattttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtggatacagcgatcgagtggcgcaattaactattggcaactccaccatcaccacacaagaagcggcaaacatcatagtcggctatggtgagtggccttcctactgctcggattctgacgctacagcagtggataaaccgacgcgcccggatgtttcggtgaataggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggagtctttgggcaaaatgcacaattccactacctctatcgatcagggttctgtatccacgtgcaatgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacaggaacag------agaacagtcaccacccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacaccagtggattaatttacgaaccaccaattgtgccacaataatagtgccatacataaacgcactgccctttgattcagccttgaaccactgtaactttgggctgttagtgttgcctattagcccactagattacgatcaaggagcaacgcccgtgattcctatcactatcacattggctccaatgtgttctgaatttgcaggtcttaggcaagcagttacccagggttttcccactgaattgaaacctggcaccaatcagttcttaaccactgacgacggcgtttctgcacccatacttccaaatttccaccccaccccgtgtatccatatacctggtggagttaggcatttgctagagctatgccaggtggagaccattttggaggtcaacaa----------tgtacccaccaatgccactagcttg------atggggggactgcgctttccggtctcagcacaagcag------ggaaaggtgggctgtgtgcggtgttcagagctgatcctgggcgacatggaccatggcagtctaccttattaggtcagttgtgcggttattacacccaatggtccggctccttggaagtcaccttcatgttcactgggtcctttatggcaaccggcaagatgctcatagcatacacacccccagggggccctttgcctaaggacagagccgcagctatgctagggacgcacgtcatttgggactcgggttgtcaatcgtctgtcacccttgtcataccatggatcagcaacactcactacagagcacatgcccgagatggagtgtttgactactacaccacagggttggtcagcatatggtatcagacaaattatgtggttccaattggggcacccaatacagcttatataatagcactagcggcagcccaaaagaatttcactatgaagttgtgtaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---agagttccat--------------------------aggtgacagcgtgagcagagccctcactcaagctctaccggca--------ccaacaggccagaacacacaggtgagcagtcaccgattggacactggtaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacgctgtgtccttaattcgcacagcacagctgagaccactctcgatagtttcttcagcagagcggggttagttggagagatagccctccctcttgaaggcacacc-taacccaaatggttatgctaactgggatatagatataacgggttacgcgcaaatgcgtagaaaggtggagctattcaccgacatgcgctttgacgcagagttcacttttgttgcgtgcacacccaccggggaggttgtcccacaattgctccaatatatgtttgtaccgcctggggcccccaagccagattccagggaatccttagcatggcaaactgccacaaacccctcagtttttgttaagctgtcagaccctccagcacaggtttcagtaccattcatgtcacctgcgagtgcttatcaatggttttatgatggatatcctacattcggtgaacacaaacaggagaaagattttgaatatggggcatgtcctaacaacatgatgggtacattctcagtgcggaccgtaggaacctccaagtccaagtaccctttagtggttaggatttacatgaggatgaagcacgtcagggcgtggatactctgcccaatgcgcaaccaaaactacctattcaaagccaacccaaattatgctggcaa----ctccattaaaccaactggtgccagtcgcgcagcgat---caccac---------------------------------------tctcggg------------------------------------------aaatttgggcaacagtccggggccatttacgtgggcaattttagagtggttaaccgtcaccttgccacccacaatgattgggcaaatcttgtttgggagaacagctctcgggacttgctcgtgtcatctaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggggtgtattattgtaattcaaggagaaaacactacccagtcagtttctcaaaacccagcctaatctacggagaggctagcgagtactacccagccagataccagtcacatctcatgctcgcacaaggtcactcagaacctggtgattgtggcggtatccttagatgccaacatggtgtcgtcggtatagtgcctactggtggcaatgggctcgttggctttgcagacgtcagggatctcctgtggttggatgaagaagctatggagcagggcgtgtccgattacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcaatatctagggaagtagaggcgttaaagaatcacttaattggttctgaaggggctgttgagaaaattttaaagaacttggtgaagctgatctcagccttggttatggttattagaagcgactatgatatggtcaccctcacagctacgctagctctgatcgggtgccacatgagtccttgggcgtggatcaaatcaaagacggcctctatactagggatccccatcgctcataagcaaagcgattcctggctaaagaagttcaatgacatggcaaacgttgttaaggggtcagagtgggtttccacaaagatcagcaaattcatggattggctcaaggagaaaattataccagcagccatggagaaggttgaattcctaaacaacttgaaacagttgcca-ctggtagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaggtcatgtttgggaatgtgtcgtatctagccca---------cttctgtcgcaagttccaaccgctatatgccacagaagctaaaagagtttatgccctggagaaaagaatgaattattacatgcagttcaagagcaaacaccgaattgaacctgtatgtcttattattaggggctcaccaggcactgggaagtctctagccactggcatcattgctcgagcaatcgctgataagtaccactccagcgtgtactcacttccaccagacccagaccaatttgatggatacaaacaacaggtggttacagtaatggatgacttgtgtcaaaaccctgatggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacatctaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtgtccgactctgacgctattcgccgcagattctacatggattgtgacattgaagtgacagactcatacaaaacagatctaggcagactggatgctgggcgggccgccaaactgtgctctgaaaacaacaccgcaaatttcaaacgctgcagcccattagtgtgtggggaagctatccagctcagagatagaaaatttaaggttagatatagtgtggatacggtagtttcagagcttattagggaatacaataataggtccgccattggcaacacaatcgaggctctattccaaggcccacccaagttcaggccaattagaatt---agccttgaagagaaaggagccccagacgctattagcgatctccttgccagggtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggatcatccgtgaaactcccaccaacgtggaacggcaccttaatagagcagtgcttgtcttgcaatccatcgccacagtagtggcggttgtatcgctagtgtatgtcatctacaagctctttgccgggtttcaaggtgcgtattctggtgctcctaagcaactacttaagaaacctgctcttcgcacagccacagtgcaagggtccgaccttgattttgctctctccttgctgaggaggaacatcaggcaagtccaaacagaccagggccatttcactatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttgggttgagcacaaactcgtgaacatccttgatgcggttgaattggtggatgagcaaggagtcaacctggaactaacccttatcactcttgacactaatgaaaagtttagggatatcaccaaatttatcccagaaaatatcagcaccgccagtgatgccaccctagtgatcaacacggagcacatgcccccaatgtttgtaccggtgggtgaccttgtgcagtatggtctcttgaatctcagtggtaaacctacccacagtaccatgatgtacaactttcctactaaagcgggacagtgtggaggagtggtgacatctgttgggaaggttatcggtattcacattggcggtaatggcagacaaggtttttgcgcaggtcttaaaaggagttactttgctagtaggcaaggagagatccagtgggttaagcccaacaaagagactggaagactcagcatcaatgggccaacccgcaccaagctagagcccagtgtgttccatgatgtcttcgagggcaataaggaaccagctgtcttgcacagtaaagacccccgcctcgaggtagactttgagcaggccttgttctctaaggatgtaggaaatacactatatgagcctgacgagtacatcatagaggcagcccttcattatgcaaatcaattgaagcagctagaaattaatacctctcaaatgagtatggaggaggcctgctacggtactgagaaccttgaggctattgaccttcatactagtgcaggttatccctatagtgccctggggataaagaaaagagacatcctagaccctaccaccagagatgtgagtaaaatgaagttctacatggacaaatatggtcttgatctcccttactccacttatgtcaaggacgagcttcgctcaattgataaaattaagaaagggaagtcccgtctgattgaggctagtagtctaaatgattcagtgtaccttagaatggctttcggtcatttgtatgagactttccacgcaaatcctgggacgataactggatcagccgtggggtgtaaccatgacacattctggagcaagttgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgctagccttagccctgtttggttcagggctttagagttggtcctgagggagatagggtatagtgagggagcaatctcactgattgagggaatcaatcacacacaccatgtgtaccgtaacaaaacctattgtttacttggtggaatgccctcaggctgctccggaacatccattttcaactcaatgatcaacaacattattatcagaaccatactgattaaaatatttaagggtattgatttggatgagctgaaaatggtggcttatggagatgatgtgttagctagttacccctttccaattgattgcttggagttaggaaatacagggaaggaatatggtctaaccatgactcctgcagataagtctccttgctttaatgaggttacttgggagaatgcaaccttcctaaaaaggggctttttacccaatgagcagtttccatttttgatccaccctaccatgcccctgggggagatccatgagtccatacgatggaccaaggacgcacgaaacactcaagaccatgtgcggtccttgtgtctcctagcatggcacaatggtaagcaagaagatgaaaaatttgtgagcacaatcaggtctgtcccagtagaaagagcattggctattccaaattatcaaaatctcagacgcaattggctcgagttatttt--ag-actggctatac-------------------------acac---------------ctcgaccc-caccagaa----atctggt------c-g-----cgaatat-g-aatc--------actaggataaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289419.1_Enterovirus_A71_isolate_EV71/P1034/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtatcttggtacctttgtgcgcct-g-ttttata------cccc---t---cccc-t------at-t-gtaacttagaag--------------cagca-aaccac-gatcaa-tagcaggcataacgctccagttatgtctcga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctagctacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gcggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctctatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcatt-----taccta----ttcatt-ggttttgtaccat-----taacctt--------------caattctgtgacc-acctttaattatattttgacccttaacacagctaaa-----catgggttcgcaagtgtctactcagcgctccggctctcatgagaactcaaactcagccactg-agggttccaccataaactataccaccattaattactacaaagactcctacgccgccacagcaggcaaacagagtctcaagcaggatcccgacaagtttgcaaatcctgttaaggacattttcgccgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtagcgcaattgactataggcaactccaccattaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacggcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccagatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcaggtttctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagttgctgtcctgccagagtatgtcattgggacagtggcaggcggtacagggacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtatgtgcttgatgccggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccgtacattaatgcactgccttttgattctgccttgaatcactgcaactttggcctgttggttgtgcccattagcccactagactacgaccaaggagcgacaccagtaatccctataactattacactggctccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacgaatcaatttttaaccaccgatgatggcgtttcagcgcctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaagttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccagtctcagcacaagcag------ggaagggtgagctgtgtgcagtgtttagagccgatcctgggcgaaatgggccatggcaatccactttattgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggaaagatgctcatagcctatacaccgccaggaggtcctctgcccaaagaccgggcgaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgttacacttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgttcgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaatcggtgcacccaatacagcctatataatagcactagcggcagcccaaaagaacttcaccatgaaattgtgcaaggatgctagtgatatcctgcagacaggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagcagagccctcactcacgctctaccagca--------cccacaggtcagaacacacaggtgagcagtcatcgactggatacaggcaaggttccggcactccaagctgctgaaattggagcatcttcaaatgctagtgacgagagcatgattgagacacgctgtgttcttaactcgcacagtacggctgagaccactcttgatagtttctttagcagggcgggattggttggagagatagatcttcctcttgagggcacaac-taacccaaatggttatgctaactgggacatagatataacaggttacgcacaaatgcgtaggaaggtagagctattcacttacatgcgctttgacgcagagttcacttttgttgcgtgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatccctcgcatggcaaaccgccaccaacccctcagttttcgtcaagctgtcagaccctccagcacaggtttcagtgccattcatgtcacctgcgagtgcttatcaatggttttatgacggatatcccacattcggagaacataagcaggagaaagatcttgaatacggggcatgtcctaataacatgatgggcacgttctcagtgcggactgtggggacctccaagtccaagtaccctttagtggttagaatttacatgagaatgaagcacgtcagggcgtggatacctcgcccgatgcgtaaccagaactatttattcaaagccaacccaaattatgctggcaa----ctccatcaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------ttttggg------------------------------------------aaatttggacaacagtttggggctatttatgtgggcaactttagagtggtcaaccgacattttgccactcacaatgattgggcgaattttgtttgggaagacagctctcgcgacttgctcgtgtcatccacccccgctcaaggttgtgacacgattgctcgttgcgattgccagacaggggtatactactgcaactcgatgagaaaacactacccagtcagtttttcaaaacccagcctgatttatgtagaggctagcgagtattacccagccaggtaccaatcacatcttatgctcgcacagggccactcagaacctggcgattgcggtggtatccttagatgccaacacggcgtcattggcatagtgtctactggtggcaatgggctcgttggctttgcagacgttagagacctcttgtggttagatgaagaagctatggaacagggcgtgtccgactacatcaag-ggtctcggagatgctttcgggacaggcttcactgatgcagtctcaagggaggttgaagctctcaagaactatctcatagggtctgaaggagcagttgagaaaatcttgaaaaatcttattaaactaatctctgcactggtgattgtgatcagaagtgattatgacatggttaccctcactgcaaccttagcactgataggttgtcatggcagtccttgggcttggatcaaggcaaaaacagcctccatcttaggtatccctatcgctcaaaagcagagcgcttcctggctcaagaagttcaatgacatggccaacgccgctaaggggttagagtgggtttccaacaagatcagcaaatttattgattggcttaaggagaaaatagtaccagcagccagggagaaggttgaattcctaaataacttgaaacagctgcca-ctgttagagaatcagatctcaaacttggaacaatctgctgcctcacaagaggaccttgaggttatgtttgggaatgtgtcgtacctagctca---------cttctgtcgcaagttccaaccgctatatgctacggaagctaaaagagtctatgccctggagaagagaatgaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggctcaccaggcactgggaagtctctagccactggtattattgctcgagcaattgctgataagtaccactccagcgtgtactcgctcccaccagacccggatcatttcgacggttacaagcaacaggtggtcacagtgatggacgatttgtgtcaaaaccccgatggtaaggatatgtctttgttttgtcaaatggtatccaccgtggactttattccaccaatggcttctcttgaggagaagggagtttccttcacctctaagtttgtcatcgcatccactaatgccagtaatatcatagtaccaacagtgtctgattctgacgctattcgccgcaggttctatatggactgtgacattgaagtgacagactcgtacaagacagatctaggcagactagatgcagggcgagccgctaaactgtgctctgaaaacaacactgcaaatttcaaacgttgcagcccattagtgtgcgggaaagctatccagcttagagatagaaagtctaaagtcaggtacagtgtggatacggtggtttcagaacttattagggaatacagcaacaggtccgctattggcaacacaatcgaggctcttttccaaggcccacccaagtttagaccaattaggatt---agccttgaagaaaaaccagccccagacgctattagcgatcttctcgccagtgtagatagtgaagaagtgcgccagtactgc-agggatcaaggctggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgctcgtcatgcaatctatcgctacagtagtggcggttgtttcgttggtgtatgtcatttacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtacagggcccgagccttgactttgctctctctctactgaggaggaatatcaggcaagtgcaaacagaccaaggacatttcaccatgctcggtgtcagggaccgtttggctgttctcccacgtcactcccaacccggcaaaacaatctgggtagagcacaaacttgtgaacatcctggacgctgtggaattggtagatgagcaaggggttaacctggagctaaccctaatcaccctcgacactaatgagaagttcagagatatcactaagttcattccagagagcatcagtgctgcaagcgatgccaccctagtgatcaacacagaacacatgccctctatgttcgtgccggtgggagacgttgtgcaatatggcttcctcaaccttagtggaaaaccaacccaccgtaccatgatgtacaattttcccaccaaggcagggcaatgcggaggagtggttacatcagttggaaaggtcatcggtatacacataggtggcaacggtagacagggattctgtgcaggtctcaagagaagctactttgccagtgagcaaggagagatccagtgggttaaacccaataaagaaactgggagactcaatatcaatgggccaactcgcactaagctcgaacccagtgtatttcatgatgtttttgagggaaacaaggagccagcagttctacatagtaaagatcctcgtcttgaagtggactttgagcaagctctgttttccaagtatgtaggtaacacactacacgagcctgatgagtacattaaggaggcagctctccattatgcaaatcagttgaaacagctagatattgacacctcccagatgagtatggaggaagcttgttacggcactgagaaccttgaggccattgacctacataccagcgcaggctacccgtacagtgctctagggataaagaaaagagacatcctagatcctactaccagggacgtgagcaagatgaaattttatatggacaagtatggcttggaccttccctactccacttatgtcaaggacgagctgcgctcgatagataagattaagaaagggaaatcccgtcttattgaagccagtagcttgaatgactctgtgtaccttaggatgacttttgggcatctttatgagactttccatgcaaaccctggaactgtgaccggctcagctgtggggtgcaatccggacacattctggagcaaactacccatcctactccctggctcactctttgcttttgattactcagggtatgacgctagtcttagccctgtctggttcagggccttggaattagttcttaaggaaataggttacagcgaggaagcagtttcacttgttgaggggatcaatcacacacaccatgtgtaccgcaacaaaacttattgtgtgcttggtggtatgccctctggttgttcaggaacatccatattcaattcaatgattaataacattattattagagcattgctcatcaaaacattcaagggcattgatttggacgagctcaacatggttgcctatggggatgatgtacttgctagttacccttttccaattgactgcctagagctagcaagaacaggcaaggagtacggtttgactatgactcctgcagacaaatccccttgctttaatgaagtcaattgggaaaatgcaacttttctcaagagaggtttcttgcctgatgagcaatttccttttttgattcatcctactatgccaatgaaggagatccacgagtccattcggtggaccaaagatgcacgcaacacacaggaccacgtgcgatccctatgcttgttggcgtggcacaacggcaagcaagaatatgacaactttgtgagcacaattaggtctgtcccagtaggaaaagcattggctatcccgaattatgagaatctgagacgtaattggctcgagttgtttt-----agaggctaaac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF982854.1_Enterovirus_A71_isolate_DL71_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactctggtacctcggtacctttgtgcgcct-g-ttttata---c--cccc---c---cccc-c------agtt-gaaacttagaag--------------cagcgcaaacca-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggaaaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtaatcctccggcccctgaatgcggctaatcccaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaatcaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----ttacctt--------------gaagtctgtggcc-acccttaattatatcttgaccctcaacacagctaaa-----catgggttcacaggtgtccacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttccactataaactatactaccattaattactataaagattcctatgccgccacagcaggtaagcagagccttaagcaggacccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccattaaaatctccatctgctgaggcatgtggttacagcgatcgggtggcacaattaactattggcaattctaccatcactacgcaagaagcagcaaacatcatagttggctatggggagtggccttcctactgttcggactctgatgctactgcagtggacaaaccaacgcgcccggatgtttcggtgaataggttttatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaaccggagtctttgggcaaaatgcacaattccactacctctatcgatcagggttctgtatccacgtgcaatgcaatgctagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacaggaacag------agaacagtcaccacccttacaagcagactcaacccggcgccgatggcttcgaattgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaataattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaaccactgcaactttggcctgttagttgtgcctattagtccactagactacgaccaaggagcgacgccagtaatccctataactatcacactggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcgcctattctaccaaacttccaccccactccgtgtatccacatacctggtggagttaggcatttgctagagctatgccaggtggagaccattttggaggtcaacaa----------tgtacccaccaatgccactagcttg------atggggggactgcgctttccggtctcagcacaagcag------ggaaaggtgggctgtgtgcggtgttcagagctgatcctgggcgacatggaccatggcagtctaccttattaggtcagttgtgcggttattacacccaatggtccggctccttggaagtcaccttcatgttcactgggtcctttatggcaaccggcaagatgctcatagcatacacacccccagggggccctttgcctaaggacagagccgcagctatgctagggacgcacgtcatttgggactcgggttgtcaatcgtctgtcacccttgtcataccatggatcagcaacactcactacagagcacatgcccgagatggagtgtttgactactacaccacagggttggttagcatatggtaccagacgaattatgtggttccaattggggcacccaatacagcctatataatagcattggcggcagcccagaagaacttcaccatgaaattgtgtaaggatgctagtgatatcctacagacaggcactatccagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagcagagccctcacccgagctctaccggca--------cctaccggccaagacacacaggtaagcagccaccgattagatactggtaaagttccagcactccaagccgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccaccctcgatagcttcttcagcagagcgggattagttggagagatagatctccctcttgaaggtacaac-taacccaaatggttatgctaactgggacatagatataacaggttacgcgcaaatgcgcagaaaggtggagttattcacctacatgcgctttgatgcagagttcacttttgttgcgtgcacacccaccggggaagttgtccctcaattgctccagtatatgtttgtaccacccggagcccccaagccagactccagggaatctctcgcatggcaaactgccactaatccttcagtctttgtgaagctgtcagaccccccagcacaggtctcagtcccgttcatgtcacctgcgagcgcctaccaatggttttatgacgggtatcccacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttctcagtgcggactgtaggaacctcgaagtccaagtacccattggtgatcaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgcaaccaaaactacctgtttaaagccaatccaaattatgctggcaa----ctccattaagccaactggtaccagtcgcacagcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttgggcagcagtctggggccatttacgtgggtaactttagagtggtcaatcgccatcttgctacttacaatgattgggcaaatcttgtttgggaagacagctctcgcgatttgctcgtgtcgtccaccaccgcccagggttgtgacacaattgcccgttgtaattgccagacaggggtgtactattgcaactcgaggagaaaacactatccagtcagtttttcaaaacccagtctgatctatgtggaggctagtgagtattacccagctagataccagtcgcacctcatgcttgcagtgggtcactcggaaccaggggattgcggtggtattctcagatgccaacacggcgtcgtaggaatagtctccaccgggggaaatggcatggtggggttcgccgatgtgagggaccttctgtggttggatgatgaagctatggagcagggcgtgtctgattacatcaaa-gggcttggagacgcttttggcatggggtttacagacgcggtgtcaagagaagttgaagcattgaagaaccacttggttggctcagagggtgctgtggagaaaattcttaagaacttagtcaaactcatttctgcgctcgtcattgtcatcagaagtgattacgacatggttacccttactgcaaccttagctttgataggttgtcatggcagtccttgggcttggatcaaagccaaaacagcttctatcttaggtatccctatcgctcaaaaacaaagcgcttcctggctcaagaagttcaatgacatggccaacgctgctaaggggctagagtgggtttccaacaagatcagcaaattcatcgattggcttaaggagaaaattgtaccagcagccaaggagaaggttgaattcctaaataacttgaaacagttacca-ctgctagagaatcagatctcaaatttggaacaatctgctgcttcgcaggaggaccttgaggcgatgtttggcaacgtgtcttatctggccca---------cttctgccgcaaattccaacccctctatgccacggaagcaaagagggtgtacgccctagaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctaatcatcagaggctcgcctggtactgggaagtccttggcaacagggattattgctagagccatagcagacaagtaccactccagtgtgtattccttacctccagacccagaccactttgacggatacaaacaacaggtggttacagtaatggatgacttgtgtcaaaaccctgatggcaaggatatgtctttattctgtcaaatggtatccaccgtagacttcattccaccaatggcttctcttgaggagaagggagtttccttcacatctaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtgtccgactctgacgctattcgccgcagattctacatggattgtgacattgaagtgacagactcatacaaaacagatctaggcagactggatgctgggcgggccgccaaactgtgctctgaaaacaacaccgcaaatttcaaacgctgcagcccattagtgtgtggggaagctatccagctcagagatagaaaatttaaggttagatatagtgtggatacggtggtttcagaacttattagggaatacagcaataggtccgctattggcaacacaatcgaggctcttttccaaggtccactcaagttcagaccaattaggatt---agtcttgaagaaaaaccagccccagacgctattagcgatctccttgctagcgtagatagtg-agaagtgcgccagtactgcaagggatcaaggttggattattcctgaagctcccaccaatgtagagcggcaccttaatagagcggtgcttgttatgcaatccatcgccacagtagtggcggttgtctcgttggtgtacgtcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaggcaagtgcttaagaaacctgctcttcgcacagccacagtgcaagggtccgaccttgattttgctctctccttgctgaggaggaacatcaggcaagtccaaacagaccagggccatttcactatgttgggtgttagggatcgtttagcagtcctcccacgtcactcacaacccggcaaaactatttgggttgagcacaaactcgtgaacatccttgatgcggttgaattggtggatgagcaaggagtcaacctggaactaacccttatcactcttgacactaatgaaaagtttagggatatcaccaaatttatcccagaaaatatcagcaccgccagtgatgccaccctagtgatcaacacggagcacatgcccccaatgtttgtgccagttggagatgtggtccagtatgggtttttgaaccttagtggtaagcccactcacaggactatgatgtacaatttcccaacaaaagcaggacagtgtggtggtgttgtgactgccgtgggtaaagtgattgggatccacattggtggcaacggtaggcaaggtttctgcgctgccctgaagaggggatacttttgcagtgaacaaggtgagatccaatggatgaagcccaacaaagaaactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtctttcacgatgtgttcgaaggcactaaagagccagcagtgttgactagtaaagacccaaggctggaagttgactttgagcaggccctgttctctaagtatgtaggaaatacgctatatgagcctgacgagtacatcaaagaggcagctcttcattatgcaaatcaattgaagcagctagaaattaatacctctcaaatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcatactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcctagaccctaccaccagggatgtgagtaaaatgaaattctacatggataaatatggtcttgatctcccttactccacttatgtcaaggacgagctccgctcaattgataaaattaagaaagggaaatcccgtctgattgaagcgagcagtctaaatgattcagtgtacttgagaatgacatttgggcacctttatgaagcttttcatgccaatccaggtacagtcactggctcagctgttggatgcaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcgttcgactactcaggatatgacgctagtcttagcccagtgtggttcagagcgctggagatagtcctgcgggaaattgggtactctgaggacgcagtgtctctcatagaagggatcaatcacacccaccatgtgtaccgcaacacaacttattgtgttcttgggggaatgccctcaggttgttcaggcacctccattttcaactcaatgattaacaacattatcatcagagcactgcttattaaaacatttaagggaattgatttggatgaacttaatatggttgcctacggagatgatgtgcttgccagttacccatttccaattgactgcttagagctagcaaaaacaggcaaagagtatggtctgaccatgactcctgcggacaagtctccttgctttaatgaagttaattgggagaacgcaaccttccttaagagaggtttcttgcctgatgaacagttcccgttcttgattcacccaatcatgccaatgaaggagattcacgagtctattcgttggactaaagacgcacgaagtacacaagatcatgtgcgctccctctgcttattagcgtggcacaatgggaaagaagagtatgaaaaatttgtgagtacaatcagatcagttccaattgggaaagcattggctataccgaattttgagaatttgagaaggaattggctcgaattgtttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagta----atctggt------c-g-----cgctaac-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM077140.1_Enterovirus_A71_strain_Hau1_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcactctggtactgaggtacctttgtgcgcct-gtttttact------cccc--tt---cccc-c------ga-a-gtaacttagaag--------------ctgtaaatcaac-gatcaa-tagcaggtgtggcacaccagtcataccttga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagggtgtttcgctcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcctatattggctgcttatggtgacaatcaaa-------aagttgttaccatatagctattggattggccatccgg--tgtgcaacagggcaattgtt-----taccta----tttatt-ggttttgtaccat-----tatcact--------------gaagtctgtgatc-actctcaaattcattttgaccctcaacacaatcaaa-----catgggctcacaggtgtccacacagcgctccggttcgcacgaaaactctaactcagctaccg-agggttccactataaactatactaccattaattactataaagattcctatgccgccacagcaggtaagcagagccttaagcaggacccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccattaaaatctccatctgccgaggcatgtggttacagcgatcgggtggcacaattaactattggcaattctaccatcactacgcaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgttcggactctgatgctactgcagtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattggacacaaaattgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaatgcacagttccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagtcgctgtcctcccagagtatgtcattgggacagtggcaggtggcacagggatgg------aggatagccaccccccttataagcagactcaacccggtgctgatggcttcgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccgtacataaacgcactaccctttgattctgccttgaaccattgtaactttggtctgctggttgtgcctattagcccgttagattatgaccaaggtgcgacgccagtgatccccattactatcactttggccccaatgtgttctgaatttgcaggccttagacaagcagttacgcaagggtttcctactgagctgaaacctggcacaaaccaatttttaaccactgacgatggcgtctcagcacccattctgccaaactttcaccccaccccgtgtatccatatacccggtgaagttagaaacttgctagagctatgccaggtggagaccattttagaggtcaacaa----------tgtacctacgaatgccactagctta------atggagagactgcgcttcccggtctcagctcaagccg------ggaaaggtgagctatgtgcagtgttcagagctgaccctggacgaagtgggccatggcagtccaccttgttgggccagttgtgcgggtactacacccaatggtcaggatcactggaagtcaccttcatgttcaccgggtcctttatggctaccggcaagatgctcatagcatacacaccaccaggaggccccttacccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggactttgggctgcaatcgtctgtcactcttgtaataccatggatcagcaacactcattacagagcgcacgctcgagatggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaattatgtggttccaattggagcgcccaatacagcctatataatagcattggcggcagcccagaagaacttcaccatgaggttgtgtaaggatgctagtgatatcctacagacaggcactatccagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagcgtgagcagagccctcacccgagctctaccggca--------cctaccggccaagacacacaggtaagcagccatcgattagatactggtaaagttccagcactccaagccgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacggtgtgttcttaattcacatagcacagctgagaccactcttgatagcttcttcagcagagcaggattagttggagagatagacctccctcttgaaggcacaac-caacccgaatgggtacgcaaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggagctgttcacctacatgcgttttgacgcagagttcacctttgttgcatgcacccctaccggggaggttgtcccgcaattgctccaatatatgtttgtaccacccggagcccccaagccagactccagagaatctctcgcatggcaaactgccactaatccctcggtttttgtgaagctgtcagaccccccagcacaggtttctgttccattcatgtcacctgcgagcgcctatcaatggttttatgacgggtatcccacattcggtgaacacaaacaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttctcagtgcggactgtaggcacctcgaagtccaagtacccattggtgatcaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccagaactatctattcaaagccaacccaaattatgctggtaa----ttctattaaaccaactggtgccagtcgcacagcgat---taccac---------------------------------------tctcggg------------------------------------------aaatttggacagcagtccggagctatctacgtgggcaactttagagtggttaaccgccatcttgctactcataatgactgggcaaaccttgtttgggaagacagctcccgcgacttgctcgtatcatctaccactgctcaaggttgtgacacgattgctcgttgcaattgccagacaggagtgtattattgtaactcaatgagaaaacactatccggtcagtttctcgaaacccagtttgatcttcctggaggccagcgagtattatccagctagataccagtcacatctcatgcttgcagtgggtcattcggaaccaggggattgcggtggcattcttagatgccaacatggcgtcgtagggatagtttccaccgggggaaatggcctggtggggttcgccgatgtgagggatcttctgtggttggatgatgaagccatggagcagggcgtgtctgattacattaaa-gggcttggagatgcttttggcatggggtttacaggcgcagtgtcaagagaagttgaagcactgaaaagttacttgaccggctcagagggtgccgtggagaagattctaaagaacttagttaaactcatctctgcgctcgtcatcgtcatcaggagtgattatgacatggtcacattgacggcaacacttgccctgatcgggtgccacgggagcccttgggcctgggttaagtcgaagacagcatcaattttgggcataccgatggctcagaagcagagtgcctcttggttaaagaagttcaacgatgcggcgaatgccgcgaaggggcttgagtggatctccaataaaatcagtaaatttatcgattggctcaaggagaaaatcgtaccggctgctaaagagaaagtcgagtttctaaacaatctaaagcaactcccc-ttattggagaaccaaatttctaatctcgaacagtcagcagcttcgcaggaggaccttgaggcgatgtttggcaacgtgtcttatctggccca---------cttctgccgcaaattccaacccctctatgccacggaagcaaagagggtgtacgccctagaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctaatcatcagaggctcgcctggtactgggaagtccttggcaacagggattattgctagagccatagcagacaagtaccactccagtgtgtattccttacctccagacccagaccactttgacggatacaaacaacagatcgtcactgttatggacgacctatgccaaaacccagacgggaaagacatgtcactattttgtcagatggtctccacagtggattttataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgattgcctccactaacgccagtaacatcatagtgccaacagtctcggattcagatgccatccgtcgccggttctttatggactgcgatattgaggtgaccgattcctataagacagagctgggcagacttgatgcagggagagcagccaggctgtgctctgagaacaacactgcaaactttaaacggtgcagtccattagtctgtgggaaagcaatccagcttagggataggaagtccaaggtgagatacagtgtggacacggtagtgagtgaacttatcagggagtataacaacagatcagttattgggaacaccattgaagctcttttccaaggaccccctaaatttagaccaataaggatt---agcttagaggagaagcctgcacctgatgctattagtgacttattagctagtgttgatagtgaagaggttcgccaatactgt-agagatcagggatggattgtacctgattctcccaccaacgttgagcaccacttgaatagagctgtcttgattatgcaatctgtagccaccgtggtagcagttgtgtcccttgtttacgtcatctacaagttgttcgccggttttcaaggagcatattccggcgcccccaagcaaacactcaagaaaccagtgctgcgcacggcaactgtgcaggggccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaaccgaccagggccactttacaatgttaggagtgcgagaccgcttggctgtgctccccagacactcccaaccaggaaagaccatctgggttgaacacaaattagtgaagatcgtagatgctgtggagttagtagacgaacaaggggttaacttagagctcacactggtaacgcttgatactaacgaaaaatttagagacatcacaagattcataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacatatgcccagtatgtttgtgccagttggagatgtggtccagtatgggtttttgaaccttagtggtaagcccactcacaggactatgatgtacaatttcccaacaaaagcaggacagtgtggtggtgttgtgactgccgtgggtaaagtgattgggatccacattggtggcaacggtagacaaggtttctgcgctgccctgaagaggggatacttttgcagtgaacaaggtgagatccaatggatgaagcccaacaaagaaactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtctttcacgatgtgttcgaaggcactaaagagccagcagtgctgactagtaaagacccaaggctggaagttgactttgaacaggctcttttttcaaaatacgtggggaacacgcttcatgaacccgacgagtttgtcaaggaggcggccctacattatgccaaccaactcaagcagttagatatcaagaccaccaagatgagcatggaggatgcatgttacggcacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcactaggcatcaagaaaaaggacattttggatccaacaactcgcgatgtcagcaagatgaaattctacatggacaagtatgggttggatctaccgtactctacttatgttaaagatgaacttagggccatcgacaagatcaagaaagggaagtctcgtctcatagaagcgagcagtctaaatgactcagtgtacttgagaatgacatttgggcacctttatgaagctttccacgccaatccaggtacaatcactggttcagctgttgggtgcaacccagatgtgttctggagcaagttaccaattctacttccaggatcgcttttcgcgtttgactactcggggtatgacgctagtctcagcccagtgtggttcagggcgctggagatagtcctgcgggaaattggatactccgaagacgcagtgtctctcatagaagggatcaatcacacccatcatgtgtaccgcaataaaacttattgtgttcttgggggtatgccctcaggttgctcaggcacctccattttcaactcgatgatcaacaatatcattattagaacactcctgattaaaacattcaaagggatagatctagatgaactgaacatggtggcctacggggatgatgtgttggctagttaccccttcccaattgactgtctggagttggcaagaacaggcaaggagtatggtctaactatgacccctgccgacaagtcaccctgctttaatgaggttacgtgggagaatgccactttcttgaagagaggattcttgcctgattatcaattcccgtttctcatccaccctacgatgccaatgagggagattcacgaatccattcgttggaccaaagatgcacgaagtactcaagatcacgtgcgctccctctgcttattagcatggcacaacgggaaagaggagtatgaaaaatttgtgagtgcaatcagatcagttccaattggaaaagcattggctataccaaattatgagaatctgaggagaaattggctcgaattgtttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagta----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaaaaa----------aaaaaaaaaaaaaaaaaaaaaaa
>AF304458.1_Enterovirus_71_strain_Tainan/4643/98_polyprotein_mRNA_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcactctggtactgaggtacctttgtgcgcct-gtttttact------cccc--tt---cccc-c------ga-a-gtaacttagaag--------------ctgtaaatcaac-gatcaa-tagcaggtgtggcacaccagtcataccttga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagggtgtttcgctcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcctatattggctgcttatggtgacaatcaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagggcaattgtt-----taccta----tttatt-ggttttgtaccat-----tatcact--------------gaagtctgtgatc-actctcaaattcattttgaccctcaacacaatcaaa-----catgggctcacaagtgtccacacaacgctccggttcacacgaaaactctaactcagctaccg-agggttccactataaactatactaccattaattactataaagattcctatgccgccacagcaggtaagcagagccttaagcaggacccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccattaaaatctccatctgctgaggcatgtggttacagcgatcgggtggcacaattaactattggcaattctaccatcactacgcaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgttcggactctgatgctactgcagtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattggacacaaaattgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaatgcacagttccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagtcgctgtcctcccagagtatgtcattgggacagtggcaggtggcacagggacgg------aggatagccaccccccttataagcagactcaacccggtgctgatggcttcgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccgtacataaacgcactaccctttgattctgccttgaaccattgtaactttggtctgctggttgtgcctattagcccgttagattatgaccaaggtgcgacgccagtgatccccattactatcactttggccccaatgtgttctgaatttgcaggccttagacaagcagttacgcaagggtttcctactgagctgaaacctggcacaaaccaatttttaaccactgacgatggcgtctcagcacccattctgccaaactttcaccccaccccgtgtatccatatacccggtgaagttagaaacttgctagagctatgccaggtggagaccattttagaggtcaacaa----------tgtacctacgaatgccactagctta------atggagagactgcgcttcccggtctcagctcaagccg------ggaaaggtgagctatgtgcagtgttcagagctgaccctggacgaagtgggccatggcagtccaccttgttgggccagttgtgcgggtactacacccaatggtcaggatcactggaagtcaccttcatgttcaccgggtcctttatggctaccggcaagatgctcatagcatacacaccaccaggaggccccttacccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattacagagcgcacgctcgagatggtgtgttcgactactacactacaggtttggttagcatatggtaccagacgaattatgtggttccaattggggcacccaatacagcctatataatagcattggcggcagcccagaagaacttcaccatgaagttgtgtaaggatgctagtgatatcctacagacaggcactatccagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagcagagccctcacccgagctctaccggca--------cctaccggccaagacacacaggtaagcagccaccgattagatactggtaaagttccagcactccaagccgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacggtgtgttcttaattcacatagtacagctgagaccactcttgatagcttcttcagcagagcaggattagttggagagatagacctccctcttgaaggcacaac-caacccgaatgggtacgcaaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggagctgttcacctacatgcgttttgacgcagagttcacctttgttgcatgcacccctaccggggaagttgtcccgcaattgctccaatacatgtttgtaccacccggagcccccaagccagactccagagaatctctcgcatggcaaactgccactaatccctcagtttttgtgaagctgtcagaccccccagcacaggtttctgttccattcatgtcacctgcgagcgcctatcaatggttttatgacgggtatcccacattcggtgaacacaaacaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttctcagtgcggactgtaggcacctcgaagtccaagtacccattggtgatcaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccagaactatctattcaaagccaacccaaattatgctggtaa----ttctattaaaccaactggtgccagtcgcacagcaat---caccac---------------------------------------cctcggg------------------------------------------aaatttggacagcagtccggagctatctacgtgggcaactttagagtggttaaccgccatcttgctactcataatgactgggcaaaccttgtttgggaagacagctcccgcgacttgctcgtatcatctaccactgctcaaggttgtgacacgattgctcgttgcaattgccagacaggagtgtattattgtaactcaatgagaaaacactatccggtcagtttctcgaaacccagtttgatcttcgtggaggccagcgagtattatccagctagataccagtcacatctcatgcttgcagtgggtcattcggaaccaggggattgcggtggcattcttagatgccaacatggcgtcgtagggatagtttccaccgggggaaacggcctggtggggttcgccgatgtgagggatcttctgtggttggatgatgaagccatggagcagggcgtgtctgattacattaaa-gggcttggagatgcttttggcatggggtttacagacgcagtgtcaagagaagttgaagcactgaaaagtcacttgatcggctcagagggtgccgtggagaagattctaaagaacttagttaaactcatctctgcgctcgtcatcgtcatcaggagtgattatgacatggtcacattgacggcaacacttgccctgatcgggtgccacgggagcccttgggcctgggttaagtcgaagacagcatcaatcttgggcataccgatggctcagaagcagagtgcctcttggttaaagaagttcaacgatgcggcgagtgccgcgaaggggcttgagtggatctccaacaaaatcagtaaatttatcgattggctcaaggagaaaatcataccggctgctaaagagaaagtcgagtttctaaacaatctaaagcaactcccc-ttattggagaaccaaatttctaatctcgaacagtcagcagcttcgcaggaggaccttgaggcgatgtttggcaacgtgtcttatctggccca---------cttctgccgcaaattccaacccctctatgccacggaagcaaagagggtgtacgccctagaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctaatcatcagaggctcgcctggtactgggaagtccttggcaacagggattattgctagagccatagcagacaagtaccactccagtgtgtattccttacctccagacccagaccactttgacggatacaaacaacagatcgtcactgttatggacgacctatgccaaaacccagacgggaaagacatgtcactattttgtcagatggtctccacagtggattttataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgattgcctccactaacgccagtaacatcatagtgccaacagtctcggattcagatgccattcgtcgccggttctttatggactgcgatattgaggtgaccgattcctataagacagagctgggcagacttgatgcagggagagcagccaggctgtgctctgagaacaacactgcaaactttaaacggtgcagtccattagtctgtgggaaagcaatccagcttagggataggaagtccaaggtgagatacagtgtggacacggtagtgagtgaacttatcagggagtataacaacagatcagttattgggaacaccattgaagctcttttccaaggaccccctaaatttagaccaataaggatt---agcttagaggagaagcccgcacctgatgctattagtgacttattagctagtgttgatagtgaagaggttcgccaatactgt-agagatcagggatggattgtacctgattctcccaccaacgttgagcgccacttgaatagagctgtcttgattatgcagtctgtagccaccgtggtagcagttgtgtcccttgtttacgtcatctacaagttgttcgccggttttcaaggagcatattccggcgcccccaagcaaacactcaagaaaccagtgctgcgcacggcaactgtgcaggggccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaaccgaccagggccactttacaatgttaggagtgcgagaccgcttggctgtgctccccagacactcccaaccaggaaagaccatctgggttgaacacaaattagtgaagatcgtagatgctgtggagttagtagacgaacaaggggttaacttagagctcacactggtaacgcttgatactaacgaaaaatttagagacatcacaagattcataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacatatgcccagtatgtttgtgccagttggagatgtggtccagtatgggtttttgaaccttagtggtaagcccactcacaggactatgatgtacaatttcccaacaaaagcaggacagtgtggtggtgttgtgactgccgtgggtaaagtgattgggatccacattggtggcaacggtaggcaaggtttctgcgctgccctgaagaggggatacttttgcagtgaacaaggtgagatccaatggatgaagcccaacaaagaaactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtctttcacgatgtgttcgaaggcactaaagagccagcagtgctgactagtaaagacccaaggctggaagttgactttgaacaggctcttttttcaaaatacgtggggaacacgcttcatgaacccgacgagtttgtcaaggaggcggccttacattatgccaaccaactcaagcagttagatatcaagaccaccaagatgagcatggaggatgcatgttacggcacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcactaggcatcaagaaaaaggacattttggatccaacaactcgcgatgtcagcaagatgaaattctacatggacaagtatgggttggatctaccgtactctacttatgttaaagatgaacttagggccatcgacaagatcaagaaagggaagtctcgtctcatagaagcgagcagtctaaatgactcagtgtacttgagaatgacatttgggcacctttatgaagctttccacgccaatccaggtacaatcactggttcagctgttgggtgtaacccagatgtgttctggagcaagttaccaattctacttccaggatcgcttttcgcgtttgactactcggggtatgacgctagtctcagcccagtgtggttcagggcgctggagatagtcctgcgggaaattggatactccgaagacgcagtgtctctcatagaagggatcaatcacacccatcatgtgtaccgcaataaaacttattgtgttcttgggggaatgccctcaggttgctcaggcacctccattttcaactcgatgatcaacaatatcattattagaacactcctgattaaaacattcaaagggatagatctagatgaactgaacatggtggcctacggggatgatgtgttggctagttaccccttcccaattgactgtctggagttggcaagaacaggcaaggagtatggtctaactatgacccctgccgacaagtcaccctgctttaatgaggttacatgggagaatgccactttcttgaagagaggattcttgcctgatcatcaattcccgtttctcatccaccctacgatgccaatgagggagattcacgaatccattcgttggaccaaagatgcacgaagtactcaagatcacgtgcgctccctctgcttattagcatggcacaacgggaaagaggagtatgaaaaatttgtgagtgcaatcagatcagttccaattggaaaagcattggctataccaaattatgagaatctgagaagaaattggctcgaattgtttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagta----atctggt------c-g-----cgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP274876.1_Enterovirus_A71_strain_Taipei/C2-Y100/2011_complete_genome
---------------------------------------------------------------------------------------------------------cct-gtttttact------cccc--tt---cccc-c------ga-a-gtaacttagaag--------------ctgtaaatcaac-gatcaa-tagcaggtgtggcacaccagtcataccttga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgctcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtgaaagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacgaacca-gtggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcctatattggctgcttatggtgacaatcaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagggcaattgtt-----taccta----tttatt-ggttttgtaccat-----tatcact--------------gaagtctgtgatc-actctcaaattcattttgaccctcaacacaatcaaa-----catgggctcacaggtgtccacacaacgctccggttcacacgaaaactctaactcagctaccg-agggttccactataaactatactaccattaattactataaagattcctatgccgccacagcaggtaagcagagccttaagcaggacccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccattaaaatctccatctgctgaggcatgtggttacagcgatcgggtggcacaattaactattggcaattctaccatcactacgcaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgttcggactctgatgctactgcagtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattggacacaaaattgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaatgcacagttccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagtcgctgtcctcccagagtatgtcattgggacagtggcaggtggcacagggacgg------aggatagccaccccccttataagcagactcaacccggtgctgatggcttcgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccgtacataaacgcactaccctttgattctgccttgaaccattgtaactttggtctgctggttgtgcctattagcccgttagattatgaccaaggtgcgacgccagtgatccccattactatcactttggccccaatgtgttctgaatttgcaggccttagacaagcagttacgcaagggtttcctactgagctgaaacctggcacaaaccaatttttaaccactgacgatggcgtctcagcacccattctgccaaactttcaccccaccccgtgtatccctatacccggtgaagttagaaacttgctagagctatgccaggtggagaccattttagaggtcaacaa----------tgtacctacgaatgccactagctta------atggagagactgcgcttcccggtctcagctcaagccg------ggaaaggtgagctatgtgcagtgttcagagctgaccctggacgaagtgggccatggcagtccaccttgttgggccagttgtgcgggtactacacccaatggtcaggatcactggaagtcaccttcatgttcactgggtcctttatggctaccggcaagatgctcatagcatacacaccaccaggaggccccttacccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattacagagcgcacgctcgagatggtgtgttcgactactacactacaggtttggttagcatatggtaccagacgaattatgtggttccaattggggcacccaatacagcctatataatagcattggcggcagcccagaagaacttcaccatgaagttgtgtaaggatgctagtgatatcctacagacaggcactatccagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------agggggcagtgtgagcagagccctcacccgagctctaccggca--------cctaccggccaagacacacaggtaagcagccaccgattagaaactggtaaagttccagcactccaagccgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacggtgtgttcttaattcacatagcacagctgagaccactcttgatagcttcttcagcagagcaggattagttggagagatagacctccctcttgaaggcacaac-caacccgaatgggtacgcaaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggagctgttcacctacatgcgttttgacgcagagttcacctttgttgcatgcacccctaccgggggagttgtcccgcaattgctccaatacatgtttgtaccacccggagcccccaagccagactccagaggatctctcgcatggcaaactgccactaatccctcagtttttgtgaagctgtcagaccccccagcacaggtttctgttccattcatgtcacctgcgagcgcctatcaatggttttatgacgggtatcccacattcggtgaacacaaacaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttctcagtgcggactgtaggcaccttgaagcccaagcacccattggtgatcaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccagaactatctattcaaagccaacccaaattatgctggtaa----ttctattaaaccaactggtgccagtcgcacagcaat---caccac---------------------------------------tctcggg------------------------------------------aaatttggacagcagtccggagctatctacgtgggcaactttagagtggttaaccgccatcttgctactcataatgactgggcaaaccttgtttgggaagacagctcccgcgacttgctcgtatcatctaccactgctcaaggttgtgacacgattgctcgttgcaattgccagacaggagtgtattattgtaactcaatgagaaaacactatccggtcagtttctcgaaacccagtttgatcttcgtggaggccagcgagtattatccagctagataccagtcacatctcatgcttgcagtgggtcattcggaaccaggggattgcggtggcattcttagatgccaacatggcgtcgtagggatagtttccaccgggggaaacggcctggtggggttcgccgatgtgagggatcttctgtggttggatgatgaagccatggagcagggcgtgtctgattacattaaa-gggcttggagacgcttttggcatggggtttacagacgcagtgtcaagagaagttgaagcactgaaaagtcacttgatcggttcagagggtgccgtggagaagattctaaagaacttagttaaactcatctctgcgctcgtcatcgtcatcaggagtgattatgacatggtcacattgacggcaacacttgccctgatcgggtgccacgggagcccttgggcctgggttaagtcgaagacagcatcaattttgggcataccgatggctcagaagcagagtgcctcttggttaaagaagttcaacgatgcggcgagtgccgcgaaggggcttgagtggatctccaacaaaatcagtaaatttatcgattggctcaaggagaaaatcataccggctgctaaagagaaagtcgagtttctaaacaatctaaagcaactcccc-ttattggagaaccaaatttctaatctcgaacagtcagcagcttcgcaggaggaccttgaggcgatgtttggcaacgtgtcttatctggcccacttctgccgcttctgccgcaaattccaacccctctatgccacggaagcaaagagggtgtacgccctagaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctaatcatcagaggctcgcctggtactgggaagtccttggcaacagggattattgctagagccatagcagacaagtaccactccagtgtgtattccttacctccagatccagaccactttgacggatacaaacaacagatcgtcactgttatggacgacctatgccaaaacccagacgggaaagacatgtcactattttgtcagatggtctccacagtggattttataccgcctatggcgtctctggaggagaagggagtctcattcacctccaagtttgtgattgcctccactaacgccagtaacatcatagtgccaacagtctcggattcagatgccattcgtcgccggttctttatggactgcgatattgaggtgaccgattcctataagacagagctgggcagacttgatgcagggagagcagccaggctgtgctctgagaacaacactgcaaactttaaacggtgcagtccattagtctgtgggaaagcaatccagcttagggataggaagtccaaggtgagatacagtgtggacacggtagtgagtgaacttatcagggagtataacaacagatcagttattgggaacaccattgaagctcttttccaaggaccccctaaatttagaccaataaggatt---agcttagaggagaagcccgcacctgatgctattagtgacttattagctagtgttgatagtgaagaggttcgccaatactgt-agagatcagggatggattgtacctgattctcccaccaacgttgagcgccacttgaatagagctgtcttgattatgcaatctgtagccaccgtggtagcagttgtgtcccttgtttacgttatctacaagttgttcgccggttttcaaggagcatattccggcgcccccaagcaaacactcaagaaaccagtgctgcgcacggcaactgtgcaggggccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaaccgaccagggccactttacaatgttaggagtgcgagaccgcttggctgtgctccccagacactcccaaccaggaaagaccatctgggttgaacacaaattagtgaagatcgtagatgctgtggagttagtagacgaacaaggggttaacttagagctcacactggtaacgcttgatactaacgaaaaatttagagacatcacaagattcataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacatatgcccagtatgtttgtgccagttggagatgtggtccagtatgggtttttgaaccttagtggtaagcccactcacaggactatgatgtacaatttcccaacaaaagcaggacagtgtggtggtgttgtgactgccgtgggtaaagtgattgggatccacattggtggcaacggtaggcaaggtttctgcgctgccctgaagaggggatacttttgcagtgaacaaggtgagatccaatggatgaagcccaacaaagaaactggcaggttgaacatcaacggacctactcgcactaaacttgaaccaagtgtctttcacgatgtgttcgaaggcactaaagagccagcagtgctgactagtaaagacccaaggctggaagttgactttgaacaggctcttttttcaaaatacgtggggaacacgcttcatgaacccgacgagtttgtcaaggaggcggccttacattatgccaaccaactcaagcagttagatatcaagaccaccaagatgagcatggaggatgcatgttacggcacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcactaggcatcaagaaaaaggacattttggatccaacaactcgcgatgtcagcaagatgaaattctacatggacaagtatgggttggatctaccgtactctacttatgttaaagatgaacttagggccatcgacaagatcaagaaagggaagtctcgtctcatagaagcgagcagtctaaatgactcagtgtacttgagaatgacatttgggcacctttatgaagctttccacgccaatccaggtacaatcactggttcagctgttgggtgcaacccagatgtgttctggagcaagttaccaattctacttccaggatcgcttttcgcgtttgactactcggggtatgacgctagtctcagcccagtgtggttcagggcgctggagatagtcctgcgggaaattggatactccgaagacgcagtgtctctcatagaagggatcaatcacacccatcatgtgtaccgcaataaaacttattgtgttcttgggggaatgccctcaggttgctcaggcacctccattttcaactcgatgatcaacaatatcattattagaacactcctgattaaaacattcaaagggatagatctagatgaactgaacatggtggcctacggggatgatgtgttggctagttaccccttcccaattgactgtctggagttggcaagaacaggcaaggagtatggtctaactatgacccctgccgacaagtcaccctgctttaatgaggttacatgggagaatgccactttcttgaagagaggattcttgcctgatcatcaattcccgtttctcatccaccctacgatgccaatgagggagattcacgaatccattcgttggaccaaagatgcacgaagtactcaagatcacgtgcgctccctctgcttattagcatggcacaacgggaaagaggagtatgaaaaatttgtgagtgcaattagatcagttccaattggaaaagcattggctataccaaattatgagaatctgagaagaaattggctcgaattgtttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagaa----a--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AF119796.3_Enterovirus_71_strain_TW/2086/98_polyprotein_gene_complete_cds
------------------ttaaaa--cag--ct-gtgggttg-c-acccacccacc-gggccact-g-ggccgctagcactctggtactgaggtacctttgtgcgcct-gtttttact------cccc--tt--ccccc-c------ga-a-gtaacttagaag--------------ctgtaaatca---gatcaa-tagcaggtgtggcacaccagtcatacctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagggtgtttcgctcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagggcaattgtt-----taccta----tttatt-ggttttgtaccat-----tatcact--------------gaagtctgtgatc-actctcaaattcattttgaccctcaacataatcaga-----catgggctcacaggtgtccacacaacgctccggttcgcacgaaaactctaactcagctaccg-agggttccactataaactatactaccattaattactataaagattcctatgccgccacagcaggtaagcagagccttaagcaggacccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccattaaaatctccatctgctgaggcgtgtggttacagcgatcgggtggcacaattaactattggcaattctaccatcactacgcaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgttcggactctgatgctactgcagtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattggacacaaaactgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaatgcacagttccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagtcgctgtcctcccagagtatgtcattgggacagtggcaggtggcacagggacgg------aggatagccaccccccttataagcagactcaacccggtgctgatggcttcgaattgcaacanccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccgtacataaacgcactaccctttgattctgccttgaaccattgtaactttggtctgctggttgtgcctattaacccgttagattatgaccaaggtgcgacgccagtgatccccattactatcactttggccccaatgtgttctgaatttgcaggccttagacaagcagttacgcaagggtttcctactgagctgaaacctggcacaaaccaatttttaaccactgacgatggcgtctcagcacccattctgccaaactttcaccccaccccgtgtatccatatacccggtgaagttagaaacttgctagagctatgccaggtggagaccattttagaggtcaacaa----------tgtacctacgaatgccactagctta------atggagagactgcgcttcccggtctcagctcaagccg------ggaaaggtgagctatgtgcagtgttcagagctgaccctggacgaagtgggccatggcagtccaccttgttgggccagttgtgcgggtactacacccaatggtcaggatcactggaagtcaccttcatgttcaccgggtcctttatggctaccggcaagatgctcatagcatacacaccaccaggaggccccttacccaaggaccgggcgaccgccatgttgggcacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcattacagagcgcacgctcgagatggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaattatgtggttccaattggagcacccaatacagcctatataatagcattggcggcagcccagaagaacttcactatgaagttgtgtaaggatgctagtgatatcctacagacaggcactatccaaggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagcagagccctcacccgagctctaccggca--------cctaccggccaagacacacaggtgagcagtcatcgattagatactggtaaagttccagcactccaagccgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacggtgtgttcttaattcacatagcacagctgagaccactcttgatagcttcttcagcagagcaggattagttggagagatagacctccctcttgaaggcacaac-caacccgaatgggtacgcaaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggagctgttcacctacatgcgttttgacgcagagttcacctttgttgcatgcacccctaccggggaagttgtcccgcaattgctccaatatatgtttgtaccacccggagcccccaagccagactccagagaatctctcgcatggcaaactgccactaatccctcagtttttgtgaagctgtcagaccccccagcacaggtttccgtcccattcatgtcacctgcgagcgcctatcaatggttttatgacgggtatcccacattcggtgaacacaaacaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttctcagtgcggactgtaggcacctcgaagtccaagtacccattggtgatcaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccagaactatctattcaaagccaacccaaattatgctggtaa----ttctattaaaccaactggtgccagtcgcacagcaat---caccac---------------------------------------tctcggg------------------------------------------aaatttggacagcagtccggagctatctacgtgggcaactttagagtggttaaccgccatcttgctactcataatgactgggcaaaccttgtttgggaagacagctcccgcgacttgctcgtatcatctaccactgctcaaggttgtgacacgattgctcgctgcaattgccagacaggagtgtattattgtaactcaatgagaaaacactatccggtcagtttctcgaaacccagtttgatcttcgtggaggccagcgagtattatccagctagataccagtcacatctcatgcttgcagtgggtcattcggaaccaggggattgcggtggcattcttaggtgccaacatggcgtcgtagggatagtttccaccgggggaaacggcctggtggggttcgccgatgtgagggatcttctgtggttggatgatgaagccatggagcagggcgtgtctgattacattaaa-gggcttggagatgcttttggcatggggtttacagacgcagtgtcaagagaagttgaagcactgaaaagccacttgatcggctcagagggtgccgtggagaagattctaaagaacttagttaaactcatctctgcgctcgtcatcgtcatcaggagtgattatgacatggtcacattgacggcaacacttgccctgatcgggtgccacgggagcccttgggcctgggttaagtcgaagacagcatcaattttgggcataccgatggctcagaagcagagtgcctcttggttaaagaagttcaacgatgcggcgagtgccgcgaaggggcttgagtggatctccaacaaaatcagtaaatttatcgattggctcaaggagaaaatcataccggctgctaaagagaaagtcgagtttctaaacaatctaaagcaactcccc-ttattggagaaccaaatttctaatctcgaacagtcagcagcttcgcaggaggatcttgaggctatgtttggtaacgtgtcttatctggctca---------cttctgccgcaaattccaacccctctatgccacggaagcaaagagggtgtacgccctagaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctaatcatcaggggctcccctggcactgggaagtgcttggcaacagggataattgctagagccatagcagagaagtaccactctagtgtgtattcacttacctcagaccctgaccactttgacggataccaacaacagatcgtcactgctatggacgacctgtgccagaatccagacggcaaagacatgtcattattttgtcaaatggtgtctacagtggatatcatgccacctatggcatctcttgaagagaagggagtctcattcgcctcaaagtttgtgattgcatcctctaccgccagtaccatcatagtgccaacagtctcggattcagatgccatccgtcgcaggttctatatggactgcgacattgaggggaccgattcctataagacagagctgggcagacttgatgcagggagagcagtcagactgtgctctgaagacagcactgcaaacttcaaacggtgcagtccattggtctgtgggaaggcaatccagcttagggatagcaagtccaaggtgagatacagtgtgcacacggtagtgagtgaccttatcagggagtatatcaacagatcagttattgggaacaccattgaagctcttttccaaggaccccctaaatttagaccaataaggatt---agcttagaggagaagctcgctcctgatgctattagtgctttattagctagtgttgatagtgaagaggtccgccaatactgt-agagttcagggatggattgtagctgattctcccacgaacgttgagcgacacttcaacagagtggtgctagtcatgcaatccatcgctactgtggttgcagttgtctcactggtgtacgtcatctacaaggtgttcgccgggtttcaaggagcatattccggcgcccccaagcaaacactcaagaaaccagtgctgcgcacggcaactgtgcaggggccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaaccgaccagggccactttacaatgttaggagtgcgagaccgcttggctgtgctccccagacactcccaaccaggaaagaccatctgggttgaacacaaattagtgaagatcgtagatgctgcggaggtagtagacgacaagggggttaacttagagctcacactggtaacgcttgatactaacgaaaaatttagagacatcaccaagatcataccagaaacaattagtcctgctagtgatgccactttaggtataaatactgaacatatgcccagtatgtttgtgccagttgaagatgttggccagtatgggtttttgacccttagtggtaagcccactcacaggactatgatgtacaatttcccaccaaaagcaggacagtgtggtggtgttgtgactgccgtgggtaaagtgattgggatccacattggtggcaacggtagcaaggntttctgcgctgccctgaagaggggatacttttgcagtgaacaaggtgagatccaatggatgaagcccaacaaagaaactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtctttcacgatgtgttcgaaggcactaaagagccagcagtgctgactagtaaagacccaaggctggaagttgactttgaacaggctcttttttcaaaatacgtggggaacacgcttcatgaacccgacgagtttgtcaaggaggcggccctacattatgccaaccaactcaagcagttagatatcaagaccaccaagatgagcatggaggatgcatgttacggcacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcactaggcatcaagaaaaaggacattttggatccaacaactcgcgatgtcagcaagatgaaattctacatggacaagtatgggttggatctaccgtactctacttatgttaaagatgaacttagggccatcgacaagatcaagaaagggaagtctcgtctcatagaagcgagcagtctaaatgactcagtgtacttgagaatgacatttgggcacctttatgaagctttccacgccaatccaggtacaatcactggttcagctgttgggtgcaacccagatgtgttttggagcaagttaccaattctacttccagggtcgcttttcgcgtttgactactcggggtatgacgctagtctcagcccagtgtggttcagggcgctggagatagtcctgcgggaaattggatactccgaagacgcagtgtctctcatagaaggaatcaatcacacccatcatgtgtaccgcaataaaacttattgtgttcttgggggaatgccctcaggttgctcaggcacctccattttcaactcgatgatcaacaatatcattattagaacactcctgattaaaacattcaaagggatagatctagatgaactgaacatggtggcctacggggatgatgtgttggctagttaccccttcccaattgactgtctggagttggcaagaacaggcaaggagtatggtctaactatgacccctgccgacaagtcaccctgctttaatgaggttacatgggagaatgccactttcttgaagagaggattcttgcctgatcatcaattcccgtttctcatccaccctacgatgccaatgagggagattcacgaatccattcgttggaccaaagatgcacgaagtactcaagatcacgtgcgctccctctgcttattagcatggcacaacgggaaagaggagtatgaaaaatttgtgagtgcaatcagatcagttccaattggaaaagcattggctataccaaattatgagaatctgagaagaaattggctcgaattgtttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagta----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaa------------------------------------
>JX025559.1_Human_enterovirus_71_strain_LAZ60-TR_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcctac-t-gggcgctagcactctggcactgaggtacctttgtgcgcct-gttttgact------tccc--tt----ccc-c------ga-a-gtaacttagaag--------------ctgtaaatcaac-gatcaa-tagtaggtgtgacacaccagtcatatcttga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgttcagca--caa-cccca---gtgtagatcaggctgatgagccactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----tatcact--------------gaagtctgtgatc-actctcaaattcattttgaccctcaacacaaccaaa-----tatgggctcacaggtgtccacacaacgctccggttcgcatgaaaactctaactcagctaccg-agggttccactataaattatactaccattaattactataaagactcctatgccgccacagcaggtaaacagagtctcaagcaagacccagacaagtttgcaaatcccgtcaaagacatcttcactgaaatggcggcgccattaaaatctccatccgctgaggcatgtggttacagcgatcgggtagcacaattaactattggcaactctaccatcactacacaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgctcggattctgacgctacagcggtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattggacactaaactgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaatgcgcagttccactacctctatcggtcagggttctgcattcacgtgcaatgcaatgctagtaagttccaccaaggagcactcctagtcgctgtcctcccagagtatgtcattgggacagtagcaggtggcacagggacgg------aggatagccaccctccttacaagcagactcaacccggtgctgatggcttcgagctgcaacacccgtacgtgcttgatgctggcgttccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggactaacaattgtgccacaataatagtaccgtacataaacgcactaccctttgattctgccttgaaccattgtaactttggtctgctggttgtgcctattagcccgttagattatgaccaaggtgcgacgccagtgatccccattactatcaccctggccccaatgtgttctgaatttgcaggccttagacaagcagttacgcaagggtttcctactgagctgaaacctggcacaaaccaatttttaaccactgacgatggcgtctcagcacccattctgccaaacttccaccccaccccgtgtatccatatacccggtgaagttagaaacttgctagagctatgccaggtggagaccattttagaggtcaacaa----------tgtacccacgaatgccactagctta------atggagagattgcgcttcccggtctcagcccaagccg------ggaaaggtgaattatgtgcagtgttcagagctgaccccgggcgaagtggaccatggcagtccaccttgttgggccagttgtgcgagtactacacccaatggtcaggatcactggaagtcaccttcatgttcactgggtcctttatggctaccggcaagatgctcatagcatacacaccaccaggaggtcccttacccaaggaccgggcgaccgccatgttgggtacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcactacagagcgcacgctcgagatggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaattacgtggttccaattggggcacccaatacagcctatataatagcattggcggcagcccagaagaatttcaccatgaagttgtgcaaggatgctagtgatatcctacagacaggcactatccagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagcagagccctcacccgagctctaccggca--------cctacaggtcaagatacgcaggtaagtagccatcgattggatactggtaaagttccagcactccaagccgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacgcgatgtgttcttaattcacatagcacagctgagaccactcttgatagcttcttcagcagagcaggattagttggagagatagaccttcctcttacaggcacaac-caacccgaatgggtatgcaaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggagttgttcacctacatgcgttttgacgcagagttcacctttgttgcatgcacgcctaccggggaagttgtcccgcaattgctccagtatatgtttgtaccacccggagcccccaaaccagactccagagaatctctcgtatggcagactgccactaatccctcagtctttgtgaagctgtcagaccccccagcacaggtttcagtaccattcatgtcacctgcaagcgcctatcaatggttctatgacgggtatcccacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgcccaaataacatgatgggtacgttttcagtgcggactgtaggaacctcgaagtccaagtacccattggtgatcaggatttacatgaggatgaagcatgtcagggcgtggatacctcgcccaatgcgcaaccaaaactatctattcaaagccaacccaaattatgctggcaa----cttcattaaaccaactggtgccagtcgcacagctat---caccac---------------------------------------cctcggg------------------------------------------aaatttggacaacagtccggggccatctacgtgggcaacttcagagtggtcaaccgccatcttgctactcataacgactgggcaaaccttgtttgggaggacagctcccgcgatttgctcgtatcatctaccactgcccaaggttgtgacacaattgctcgttgcaattgccagacaggagtgtactattgtaactcaatgagaaaacactatcctgtcagtttctcgaaacccagcttgatcttcgtagaggccagtgagtattacccggctagataccagtcacacctcatgcttgcagtgggtcactcagaaccaggggattgcggtggcattcttagatgccaacacggcgtcgtagggatagtttccaccgggggaaacggcctggtgggattcgccgatgtgagggatcttctgtggttggatgatgaggctatggagcagggcgtgtctgattacatcaaa-gggcttggagatgcttttggcatggggtttacagacgcagtgtcaagagaagttgaagcattaaaaaatcacttgatcggctcagagggtgccgtggagaagattcttaagaacttagtcaaactcatctctgcgctcgtcattgtcatcaggagtgattatgacatggtcacattaacggcaacacttgccctgatcgggtgccacgggagcccttgggcctgggttaaatcgaagacagcatcaattttgggcataccgatggctcagaagcagagtgcctcttggttaaagaagttcaacgatgcggcgagtgccgctaaggggcttgagtggatctccaacaaaatcagcaaatttatcgattggctcaaggagaaaatcattccggctgctaaagagaaagtcgagtttctaaacaatctaaagcaactcccc-ttattggagaaccaaatttccaatctcgaacagtcagcagcttcgcaggaggaccttgaagcgatgtttggcaacgtgtcttatctggccca---------cttctgccgcaaattccaacccctctatgccacagaagcgaagagggtgtacgccctagaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctaatcattagaggctcgcctggtactgggaagtccttggcaacagggattattgctagagctatagcagacaagtaccactccagtgtgtattccttacctccggacccagaccactttgacggatacaaacaacagatcgtcactgttatggacgacctatgccaaaacccagacgggaaagacatgtcactattttgtcagatggtctccacagtggattttataccgcctatggcatctctggaggagaagggagtctcatttacctccaagtttgtgatcgcctccacaaacgccagtaacatcatagtgccaacagtctcggattcagatgccatccgtcgtcggttctttatggactgtgatattgaggtaactgattcctataagacagagctgggcaggcttgatgcagggagagcagctaggctgtgctctgagaacaacactgctaactttaaacggtgcagtccattggtctgtgggaaagcaatccagcttagggataggaagtccaaggtgagatacagtgtggacacggtagtgagtgagcttgtcagggagtataacaacagatcagttattgggaacaccattgaagctcttttccaagggccccctaaatttagaccgataaggatt---agcctagaggagaagcccgcacctgatgctattagtgacctattagctagtgtcgatagtgaagaggttcgccaatactgt-agagatcagggatggattgtacctgactctcccaccaacgttgagcgccacttaaacagagctgtcttgattatgcaatctgtagccaccgtggtagcggttgtgtcccttgtttacgttatctacaagttgttcgccggttttcaaggagcatactccggcgcccccaagcaaacactcaagaaaccagtgctgcgcacggcaactgtgcaggggccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaaccgaccagggccactttacaatgttaggagtgcgagaccatttggctgtgctccccaggcactcccaaccaggaaagaccatctgggttgaacacaagttagtgaaggtcgtagatgctgtggagctagtagatgaacaaggggttaacctagagctcacactggtaacgcttgacaccaacgaaaaatttagagacatcacaagattcataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacatatgcccagtatgtttgtgccagttggagatgtggtccagtatggatttttgaaccttagtggtaagcccactcacaggactatgatgtacaattttccaacaaaagcaggacagtgtggtggagttgtgactgccgtgggtaaggtgattgggatccacattggtggcaacggtaggcaaggtttctgcgctgccctgaagaggggatacttttgcagtgaacaaggtgagatccaatggatgaagcccaacaaagaaactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtctttcacgatgtgttcgagggcactaaagagccagcagtgctgactagtaaagacccaaggctggaagttgactttgaacaggctcttttttcaaaatacgtgggaaacacgcttcatgaacccgacgagtttgtcaaggaggcggccttacattatgccaaccaactcaagcagttagatattaagaccaccaagatgagcatggaggatgcttgttacggtacagagaacctggaagctatagatcttcacacaagtgcaggatatccatatagtgcactaggcatcaagaaaagggatattttggacccaacaactcgtgatgtcagcaaaatgaaatcctacatggacaagtatgggttggatctaccgtactctacttatgttaaagatgaactcagggccatcgacaagatcaagaaaggaaagtctcgtctcatagaagcaagcagtctaaatgactcagtgtacttgagaatgacatttgggcacctttatgaagcctttcacgccaatccaggtacagtcactggttcagctgttggatgcaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcgtttgactactcggggtatgacgctagtctcagcccagtgtggttcagggcgctggagatagtcctgcgggaaattggatactctgaggacgcactgtctctcatagaagggatcaatcatacccaccatgtgtaccgcaataaaacttattgtgttcttgggggaatgccctcaggttgctcaggcacctccattttcaacacgatgatcaacaacattattattaggacactcctgattaaaacattcaaagggatagatctagatgaattgaacatggtggcctacggggatgatgtgttggctagttaccccttcccaattgactgtctagaattggcgagaacaggcaaggagtatggtttaactatgacccctgccgacaagtcaccctgctttaatgaagtcacatgggagaatgccaccttcttgaagagaggattcttgcctgatcatcaattcccgttcctcatccaccctacgatgccaatgagggagattcacgagtccattcgttggaccaaagatgcacgaagtacccaagatcatgtgcgctccctctgcttattagcatggcacaacgggaaagaggagtatgaaaaatttgtgagtacaatcagatcagttccaattggaaaagcattggctataccaaattttgagaacctgagaagaaattggctcgaattgtttt--aa-atttacagttc-------------------------ataa---------------ctgaaccc-caccagta----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaaaa----------------------------------
>JN992283.1_Human_enterovirus_71_strain_0964/SYD/98_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcctac-t-gggcgctagcactctggcactgaggtacctttgtgcgcct-gttttgact------tccc--tt----ccc-c------ga-a-gtaacttagaag--------------ctgtaaatcaac-gatcaa-tagtaggtgtgacacaccagtcatatcttga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgttcagca--caa-cccca---gtgtagatcaggctgatgagccactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccca----tttatt-ggttttgtaccat-----tatcact--------------gaagtctgtgatc-actctcaaattcattttgaccctcaacacaaccaaa-----tatgggctcacaggtgtccacacaacgctccggttcgcatgaaaactctaactcagctaccg-agggttccactataaattataccaccattaattactataaagactcctatgccgccacagcaggtaaacagagtctcaagcaagacccagacaagtttgcaaatcccgtcaaagacatcttcactgaaatggcggcgccattaaaatctccatccgctgaggcatgtggttacagcgatcgggtagcacaattaactattggcaactctaccatcactacacaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgctcggattctgacgctacagcggtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattggacactaaactgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaatgcgcagttccactacctctatcggtcggggttctgcattcacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagtcgctgtcctcccagagtatgtcattgggacagtagcaggtggcacagggacgg------aggatagccaccctccttacaagcagactcaacccggtgctgatggcttcgagctgcaacacccgtacgtgcttgatgctggcgttccaatatcacaattaacagtgtgcccacatcagtggatcaatttgaggactaacaattgtgccacaataatagtaccgtacataaacgcactaccctttgattctgccttgaaccattgtaactttggtctgctggttgtgcctattagcccgttagattatgaccaaggtgcgacgccagtgattcccattactatcaccctggccccaatgtgttctgaatttgcaggccttagacaagcagttacgcaagggtttcctactgagctgaaacctggcacaaaccaatttttaaccactgacgatggcgtctcagcacccattctgccaaacttccaccccaccccgtgtatccatatacccggtgaagttagaaacttgctagagctatgccaggtggagaccattttagaggtcaacaa----------tgtacccacgaatgccactagctta------atggagagattgcgcttcccggtctcagcccaagccg------gaaaaggtgaattatgtgcagtgttcagagctgaccccgggcgaagtggaccatggcagtccaccttgttgggccagttgtgcgggtactacacccaatggtcaggatcactggaagtcaccttcatgttcactgggtcctttatggctaccggcaagatgctcatagcatacacaccaccaggaggtcccttacccaaggaccgggcgaccgccatgttgggtacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcactacagagcgcacgctcgagatggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaattacgtggttccaattggggcacccaatacagcctatataatagcattggcggcagcccagaagaatttcaccatgaagttgtgcaaggatgctagtgatatcctacagacaggcactatccagggagatagg--------gtggcagatgtgattg---agagttccat--------------------------aggggacagtgtgagcagggccctcacccgagctctaccggca--------cctacaggccaaaatacgcaggtaagtagccatcgattggatactggtaaagttccagcactccaagccgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacgcgatgtgttcttaattcacatagcacagctgagaccactcttgatagcttcttcagcagagcaggattagttggagagatagaccttcctcttgaaggcacaac-caacccaaatgggtatgcaaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggagttgttcacctacatgcgttttgacgcagagttcacctttgttgcatgcacgcctaccgggcaagttgtcccgcaattgctccagtatatgtttgtaccacccggagcccccaaaccagactccagagaatctctcgcatggcaaactgccaccaatccctcagtctttgtgaagctgttagaccccccagcacaggtttcagttccattcatgtcacctgcgagcgcctatcaatggttctatgacgggtatcccacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgcccaaataacatgatgggtacgttttcagtgcggactgtaggaacctcgaagtccaagtacccattggtgatcaggatttacatgaggatgaagcatgtcagggcgtggatacctcgcccaatgcgcaaccaaaactatctattcaaagccaacccaaattatgctggtaa----ctccattaaaccaactggtgccagtcgcacagcaat---caccac---------------------------------------cctcggg------------------------------------------aaatttggacaacagtccggggccatctacgtgggcaacttcagagtggtcaaccgccatcttgctactcataacgactgggcaaaccttgtttgggaggacagctcccgcgatttactcgtatcatctaccactgcccaaggttgtgacacaattgctcgttgcaattgccagacaggagtgtactattgtaactcaatgagaaaacactatcctgtcagtttctcgaaacccagcttgatcttcctagaggccagtgagtattacccggctagataccagtcacacctcatgcttgcagtgggtcactcagaaccaggggattgcggtggcattcttagatgccaacacggcgtcgtagggatagtttccaccgggggaaacggcctggtggggttcgccgatgtgagggatcttctgtggttggatgatgaggctatggagcagggcgtgtctgattacatcaag-gggcttggagatgcttttggcatggggtttacagacgcagtgtcaagagaagttgaagcattaaaaaatcacttgatcggctcagagggtgccgtggagaagattcttaagaacttagtcaaactcatctctgcgctcgtcattgtcatcaggagtgattatgacatggtcacattgacggcaacacttgccctgatcgggtgccacgggagcccttgggcctgggttaaatcgaagacagcatcaattttgggcataccgatggctcagaagcagagtgcctcttggttaaagaagttcaacgatgcggcgagtgccgctaaggggcttgagtggatctccaacaaaatcagcaaatttatcgattggctcaaggagaaaatcattccggctgctaaagagaaagtcgagtttctaaacaatctaaagcaactcccc-ttattggagaaccaaatttccaatctcgaacagtcagcagcttcgcaggaggaccttgaagcgatgtttggcaacgtgtcttatctggccca---------cttctgccgcaaattccaacccctctatgccacggaagcaaagagggtgtacgccctagaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctaatcatcagaggctcgcctggtactgggaagtccttggcaacagggattattgctagagctatagcagacaagtaccgctccagtgtgtattccttacctccggacccagaccactttgacggatacaaacaacagatcgtcactgttatggacgacctatgccaaaacccagacgggaaagacatgtcactattttgtcagatggtctccacagtggattttataccgcctatggcatctctggaggagaagggagtctcatttacctccaagtttgtgatcgcctccacaaacgccagtaacatcatagtgccaacagtctcggattcagatgccatccgtcgtcggttctttatggactgcgatattgaggtgactgattcctataagacagagctgggcaggcttgatgcagggagagcagctaggctgtgctctgagaacaacactgctaactttaaacggtgcagtccattggtctgtgggaaagcaatccagcttagggataggaagtccaaggtgagatacagtgtggacacggtagtgagtgagcttatcagggagtataacaacagatcagttattgggaacaccattgaagctcttttccaagggccccctaaattcagaccgataaggatt---agcctagaggagaagcccgcacctgatgctattagtgacctattagctagtgtcgatagtgaagaggttcgccaatactgt-agagatcagggatggattgtacctgactctcccaccaacgttgagcgccacttaaacagagctgtcttgattatgcaatctgtagccaccgtggtagcagttgtgtcccttgtttacgttatctacaaattgttcgccggttttcaaggagcatactccggcgcccccaagcaaacactcaagaaaccagtgctgcgcacggcaactgtgcaggggccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaaccgaccagggccactttacaatgttaggagtgcgagaccatttggctgtgctccccaggcactcccaaccaggaaagaccatctgggttgaacacaagttagtgaagatcgtagatgctgtggagctagtagatgaacaaggggttaacctagagctcacactggtaacgcttgacaccaacgaaaaatttagagacatcacaagattcataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacatatgcccaatatgtttgtgccagttggagatgtggtccagtatggatttttgaaccttagtggtaagcccactcacaggactatgatgtacaattttccaacaaaagcaggacagtgtggtggagttgtgactgccgtgggtaaggtgattgggatccacattggtggcaacggtaggcaaggtttctgcgctgccctgaagaggggatacttttgcagtgaacaaggtgagatccaatggatgaagcccaacaaagaaactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtctttcacgatgtgttcgagggcactaaagagccagcagtgctgactagtaaagacccaaggctggaagttgactttgaacaggctcttttttcaaaatacgtgggaaacacgcttcatgaacccgacgagtttgtcaaggaggcggccttacattatgccaaccaactcaagcagttagatattaagaccaccaagatgagcatggaggatgcttgttacggtacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcactaggcatcaagaaaagggatattttggacccaacaactcgtgatgtcagcaagatgaaattctacatggacaagtatgggttggatctaccgtactctacttatgttaaagacgaactcagggccattgacaagatcaagaaaggaaagtctcgtctcatagaagcgagcagtctaaatgactcagtgtacttgagaatgacatttgggcacctttatgaagcctttcacgccaatccaggtacagtcactggttcagctgttggatgcaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcgtttgactactcggggtatgacgctagtctcagcccagtgtggttcagggcgctggagatagtcctgcgggaaattggatactctgaggacgcactgtctctcatagaagggatcaatcacacccaccatgtgtaccgcaataaaacttattgtgttcttgggggaatgccctcaggttgctcaggcacctccattttcaactcgatgatcaacaacatcattattaggacactcctgattaaaacattcaaagggatagatctagatgaattgaacatggtggcctacggggatgatgtgttggctagttaccccttcccaattgactgtctggaattggcgagaacaggcaaggagtatggtttaactatgacccctgccgacaagtcaccctgctttaatgaagtcacatgggagaatgccactttcttgaagagaggattcttgcctgatcatcaattcccgttcctcatccaccccacgatgccaatgagggagattcacgagtccattcgttggaccaaagatgcacgaagtactcaagatcatgtgcgctccctctgcttattagcatggcacaacgggaaagaggagtatgaaaaatttgtgagtacaatcagatcagttccaattggaaaagcattggctataccaaattttgagaacctgagaagaaattggctcgaattgtttt--aa-atttacagttc-------------------------ataa---------------ctgaaccc-caccagta----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575939.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_365
------------------------------------------------------------------------------------------------ctttgtgcgcct-gtttttact------tccc--tt----ccc-c------ga-a-gtaacttagaag--------------ctgtaaaccaac-gatcaa-tagtaggtgtgacacgccagtcatatcttga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgctcagca--caa-cccca---gtgtagatcaggctgatgagccactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccattcgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccac-----tatcact--------------gaagtctgtgatc-accctcgaattcattttgaccctcaacacaatcaga-----catgggctcacaggtgtccacacaacgctccggttcgcatgaaaactctaactcagctaccg-agggttccactataaattacactaccattaattactataaagactcctatgccgccacagcaggtaaacagagccttaagcaggacccagacaagtttgcaaatcctgtcaaagacatcttcgctgaaatggcggcgccattaaaatctccatccgctgaggcatgcggttacagcgatcgggtagcacaattgactattggcaactctaccatcactacacaagaagcagcaaacatcatagttggctatggtgagtggccttcttactgttcggattctgacgctacagcagtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattggacactaaactgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaacgcacagttccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagttgctgtcctcccagagtatgtcattgggacagtagcaggtggtacagggacgg------aggatagccaccccccttacaagcagactcaacccggtgctgatggcttcgagttgcaacacccgtacgtgcttgatgctggcgttccaatatcacaattaacagtgtgcccacatcagtggattaacttgaggaccaacaattgtgccactataatagtgccgtacataaacgcactaccctttgattctgccttgaaccattgtaattttggcctgctggttgtgcctattagcccgttagattatgatcaaggtgcgacgccagtgatccccattactatcaccctcgccccaatgtgctctgaatttgcaggccttagacaagcagttacgcaagggtttcctactgagctgaaacctggcacaaaccaatttttaaccactgacgatggcgtctcagcacccattctaccaaacttccaccccaccccgtgtatccatatacccggtgaagttagaaacttgctagagctatgccaggtggagaccattttagaggtcaacaa----------tgtacccacgaatgccactagctta------atggagagactgcgcttcccagtttcagcccaggccg------gaaaaggtgaattatgtgcagtgttcagagctgaccccgggcgaagtggaccatggcagtccaccttgttgggccagttgtgcgggtactacacccaatggtcagggtcactggaagtcaccttcatgttcactgggtcctttatggctaccggcaagatgctcatagcatacacaccaccaggaggtcccttacccaaggaccgggcgaccgctatgttgggtacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcactacagagcgcacgctcgagatggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaattacgtggtcccaattggggcacccaatacagcctatataatagcattggcggcagcccagaagaatttcaccatgaagttgtgcaaggatgctagtgatatcctacagacaggcactatccagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagcgtgagtagagccctcacccgagctctaccggca--------cctacaggccaaaacacgcaggtaagcagccatcgattggatactggtaaagttccagcgctccaagctgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacgcgatgtgttcttaattcacatagcacagctgagaccactcttgatagcttcttcagcagagcaggattagttggagagatagacctccctcttgaaggcacaac-caacccgaatgggtatgcaaactgggacatagatataacaggttacgcacaaatgcgtagaaaggtggaattgttcacctacatgcgttttgacgcagagttcacctttgttgcatgcacgcctaccggggaagttgtcccgcaattgctccagtatatgtttgtaccacctggagcccccaagccagactccagagaatctctcgcatggcaaactgccactaatccctcagtctttgtgaagctgtcagaccccccagcacaggtttcagttccattcatgtcacctgcgagcgcctatcagtggttctatgacgggtatcccacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttctcagtgcggactgtaggaacctcgaaatccaagtacccattggtgatcaggatttacatgaggatgaaacacgtcagggcgtggatacctcgcccaatgcgtaaccaaaattatctattcaaagccaacccaaattatgctggcaa----ctccattaaaccaactggtgccagtcgcacagcaat---caccac---------------------------------------cctcggg------------------------------------------aaatttggacaacagtccggggccatctacgtgggcaacttcagagtggtcaaccgccatcttgctactcataatgactgggcaaaccttgtttgggaggacagctcccgcgatttactcgtatcatctaccactgcccaaggttgtgacacgattgctcgttgcaattgccagacaggagtgtattattgtaactcaatgagaaaacactatccggtcaatttctcgaaacctagcttgatcttcgtagaggccagcgagtattacccggctagataccagtcacacctcatgcttgcagtgggtcactcagaaccaggggattgcggtggcattcttagatgccaacacggcgtcgtaggaatagtttccaccgggggaaacggcctggtggggttcgccgatgtgagggatcttctgtggttggatgatgaggccatggagcagggcgtgtctgattacatcaaa-gggcttggagacgcttttggcatggggtttacagacgcagtgtcaagagaagttgaagcattgaaaaatcacttgatcggctcagagggtgccgtggagaggattcttaagaacttagtcaaactcatctctgcactcgtcattgtcatcaggagtgattatgacatggtcacgttgacggcaacacttgccctgatcgggtgccacgggagcccttgggcctgggttaagtcgaaaacagcatcaattttgggcataccaatggctcagaagcagagtgcctcttggttaaagaagtttaacgatgcggcgagtgccgctaaggggcttgagtggatctccaacaaaatcagcaaatttatcgattggctcaaggagaaaatcattccggctgctaaagagaaagtcgagtttctaaataatctaaagcaactcccc-ttattggagaaccaaatttccaatctcgagcagtctgcagcttcgcaggaggaccttgaagcgatgtttggcaacgtgtcttatctggccca---------cttctgccgcaaattccaacccctctatgccgcggaagcgaagagggtgtacgccctagaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctaatcatcaggggttcgcctggtactgggaagtccttggcaacagggattattgctagagctatagcagacaagtatcattccagtgtgtattccttacctccggacccagaccactttgacgggtacaaacaacagatcgtcactgttatggacgacctatgccaaaacccagacgggaaggacatgtcactattttgtcagatggtctccacagtggattttataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgatcgcctccactaacgccagtaacatcatagtgccaacagtctcggattcagatgccatccgtcgtcggttctttatggattgcgatattgaggtaactgattcctataagacagagctgggcaggcttgatgcagggagagcagctaggctgtgctctgagaacaacactgcaaactttaaacggtgcagtccactggtctgtgggaaagcaatccagcttagggataggaagtccaaggtgagatacagtgtggacacggtagtgagtgagcttgtcagggagtataacaacagatcagttattgggaacaccattgaagctcttttccaaggaccccctaaatttagaccgataaggatt---agcttagaggagaagcccgcacctgatgctattagtgacctattagctagtgtcgatagtgaagaggttcgccaatactgt-agagatcaggggtggattgtacctgactctcccaccaacgttgagcgccatttaaacagagctgtcttgattatgcaatctgtagccaccgtggtagcagttgtatcccttgtttacgttatctacaagttgttcgccggttttcaaggagcatattccggcgcccccaagcaaacactcaagaaaccagtgctgcgcacggcaactgtgcaggggccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaactgaccagggccacttcacaatgttaggagtgcgagaccacttggctgtgctccccaggcactcccaaccaggaaagaccatctgggttgaacacaagttagtgaagatcgtagatgctgtggagctagtagatgaacaaggagttaacctagagctcacactggtaacgcttgacaccaacgaaaaatttagagacatcacaaaattcataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacatatgcccagtatgtttgtgccagttggagatgtggtccagtatggatttttgaaccttagtggtaagcccactcacaggactatgatgtacaattttccaactaaagcaggacagtgtggtggtgttgtgactgccgtgggtaaagtgattgggatccacattggtggcaacggtaggcaaggtttctgcgctgccctgaagaggggatacttttgcagtgaacaaggtgagatccaatggatgaagcccaataaagaaactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtctttcacgatgtgtttgagggcactaaagagccagcagtgcttactagtaaagacccaaggctggaggttgactttgaacaggctcttttttcaaaatacgtgggaaacacgcttcatgaacccgatgagtttgtcaaggaggcggccttacattatgccaaccaactcaagcagttagatatcaagaccaccaagatgagcatggaggatgcttgttacggtacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcactaggcatcaagaaaagggatattttggacccaacaactcgtgatgtcagcaagatgaaattctacatggacaagtatgggttggatctaccgtactctacttatgttaaagatgaactcagggccatcgacaagatcaagaaaggaaagtctcgtctcatagaagcgagcagtctaaatgactcagtgtacttgagaatgacatttgggcacctttatgaaacttttcatgccaatccaggtacagtcactggttcagctgttggatgcaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcgtttgactactcggggtatgacgctagtctcagcccagtgtggttcagggcgctggagatagtcctgcgggaaattggatactctgaggacgcagtgtctctcatagaagggatcaatcacacccaccatgtgtaccgcaataaaacttattgtattcttgggggaatgccctcaggttgctcaggcacctccattttcaactcgatgatcaacaacatcattattaggacactcctgattaaaacattcaaagggatagatctagatgaattgaacatggtagcctacggggatgatgtgttggctagttaccccttcccaattgactgtctggaattggcgagaacaggcaaggagtatggtttaactatgacccctgccgacaagtcaccctgctttaatgaagtcacatgggagaatgccactttcttgaagagaggattcttgcctgatcatcaattcccgttcctcatccaccccacgatgccaatgagggagattcacgagtccattcgttggaccaaagatgcacgaagtactcaagatcatgtgcgctccctctgcttattagcatggcacaacgggaaagaggagtatgaaaaatttgtgagtacaatcagatcagtgccaattggaagagcattggctataccgaattttgagaatctgagaagaaattggctcgaattgtttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagta----a--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>DQ341357.1_Human_enterovirus_71_isolate_7F-AUS-6-99_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcctac-t-gggcgctagcactctggcactgaggtacctttgtgcgcct-gtttttact------tccc--tt----ccc-c------ga-a-gtaacttagaag--------------ctgtaaaccaac-gatcaa-tagcaggtgtgacacaccagtcatatcttga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgctcagca--caa-cccca---gtgtagatcaggctgatgagccactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaatcctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccac-----tatcact--------------gaagtctgtgatc-actctcgaattcattttgaccctcaatacaatcaaa-----catgggctcacaggtgtccacacaacgctccggttcgcatgaaaactctaactcagctaccg-agggttccactataaattacactaccattaattactataaagactcctatgccgccacagcaggtaaacagagccttaagcaggacccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcggcgccattaaaatctccatccgctgaggcatgcggttacagcgatcgggtagcacaattaactattggcaactctaccatcactacacaagaagcagcaaacatcatagttggctatggtgagtggccttcatactgctcggattctgacgctacagcagtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattggacactaaactgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaacgcacagttccattatctctatcggtcagggttctgcattcacgtgcagtgtaatgctagtaagttccaccaaggagcactcctagtcgctgtcctcccagagtatgtcattgggacagtagcaggtggtacagggacgg------aggatagccaccccccttacaagcagactcaacccggtgctgatggcttcgagttgcaacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagcggattaatttgaggaccaccaattgtgccacaattatagtaccgtatataaacgcactaccctttgattctgccttgaaccattgcaactttggcctgctggttgtgcctattagcccgttagattatgaccaaggtgcgacgccagtgatccccattactatcaccctggccccaatgtgctctgaattcgcaggccttagacaagcagttacgcaagggtttcctactgagctgaaacctggcacaaaccaatttttaaccactgacgatggcgtctcagcacccattctaccaaacttccaccccaccccgtgtatccatatacccggtgaagttagaaacttgctagagctatgccaggtggagaccattttagaggtcaacaa----------tgtacccacgaatgccactagctta------atggagagactgcgcttcccggtttcagcccaggccg------gaaaaggtgaattatgtgcagtgttcagagctgaccccgggcgaagtggaccatggcagtccaccttgttgggccagttgtgcgggtactacacccaatggtcaggatcactggaagtcaccttcatgttcactgggtcctttatggctaccggcaagatgctcatagcatacacaccaccaggaggtcccttacccaaggaccgggcgactgctatgttgggtacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcactacagagcgcacgctcgagacggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaattacgtggtcccaattggggcacccaatacagcctatataatagcattggcggcagcccagaagaatttcaccatgaagttgtgtaaggatgctagtgatatcctacagacaggcactatccagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagcagagccctcacccgagctctaccggca--------cctacaggccaaaacacgcaggtaagcagccatcgattggatactggtaaagttccagcgctccaagccgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacgcgatgtgttcttaattcacatagcacagctgagaccactcttgacagcttcttcagcagagcaggattagttggagagatagacctccctcttgaaggcacaac-caacccgaatgggtatgcaaactgggacatagacataacaggttatgcgcaaatgcgtagaaaggtggaattgttcacctacatgcgttttgacgcagagttcacctttgttgcatgcacgcctaccggggaagttgtcccgcaattgctccagtatatgtttgtaccacccggagcccccaagccagactccagagaatctctcgcatggcaaactgctactaatccctcagtctttgtgaagctgtcagaccccccagcacaggtttcagttccattcatgtcacctgcgagcgcctatcagtggttctatgacgggtatcctacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttctcagtgcggactgtaggaacctcgaagtccaagtacccattggtgatcaggatttacatgaggatgaaacacgtcagggcgtggatacctcgcccaatgcgcaaccaaaattatctattcaaagccaacccaaattatgctggcaa----ctccatcaaaccaactggtgccagtcgcacagcaat---caccac---------------------------------------cctcggg------------------------------------------aaatttggacaacagtccggggccatctacgtgggcaactttagagtggtcaaccgccatcttgctactcataatgactgggcaaaccttgtttgggaggacagctcccgcgacttactcgtatcatctaccactgcccaaggttgtgacacgattgctcgttgcaattgccagacaggagtgtattattgtaactcaatgagaaaacactatccggtcagtttctcgaaacccagcttgatcttcgtagaggccagtgagtattacccggctagataccagtcacacctcatgcttgcagtgggtcactcagaaccaggggattgcggtggcattcttagatgccaacacggcgtcgtaggaatagtttccactgggggaaacggcctggtggggttcgccgatgtgagggatcttctgtggctggatgatgaggccatggagcagggcgtgtctgattacatcaaa-gggcttggagatgcttttggcatggggtttacagacgcagtgtcaagagaagttgaagtgttgaaaaatcacttgatcggctcagagggtgtcgtggagaagatccttaagaacttagtcaaactcatctctgcgctcgtcattgtcatcaggagtgattatgacatggtcacattgacggcaacacttgccctgatcgggtgccacgggagcccttgggcctgggttaagtcgaaaacagcatcaattttgggcataccgatggctcagaagcagagtgcctcttggttaaagaagtttaacgatgcggcgagtgccgctaaggggcttgagtggatctccaacaaaatcagcaaatttatcgattggctcaaggagaaaatcattccggctgctaaagagaaagtcgagtttctaaacaatctaaagcaactcccc-ttattggagaaccaaatttccaatctcgagcagtcagcagcttcgcaggaggaccttgaagcgatgtttggcaatgtgtcttatctggccca---------cttctgccgcaaattccaacccctctacgccacggaagcgaagagggtgtacgccctagaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctaatcatcagaggttcgcctggtactgggaagtccttggcaacagggattattgctagagctatagcagacaagtatcactccagtgtgtattccttacctccggacccagaccacttcgacgggtacaaacaacagatcgtcactgttatggacgacctatgccaaaacccagacgggaaagacatgtcactattttgtcagatggtctccacagtggatttcataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgatcgcctccactaacgccagtaacatcatagtgccaacagtctcggattcagatgccatccgtcgtcggttctttatggactgcgatattgaggtaactgactcctataagacagagctgggcaggcttgatgcagggagagcagctaggttgtgctctgagaacaacactgcaaactttaaacggtgcagtccactggtctgtgggaaagcaatccagcttagggataggaagtccaaggtgagatacagtgtggacacggtagtgagtgagcttgtcagggagtataacaacagatcagttattgggaacaccattgaagctcttttccaaggaccccctaaatttagaccgataaggatt---agtctagaggagaagcccgcacctgatgctattagtgacctgttagctagtgtcgatagtgaagaggttcgccaatactgt-agagatcagggatggattgtacctgactctcccaccaatgttgagcgccatttgaacagggctgtcttgattatgcaatctgtagccaccgtggtagcagttgtgtccctagtttacgttatctacaagttgttcgccggttttcaaggagcatattccggcgcccccaagcaaacactcaagaaaccagtgctgcgcacggcaactgtacaggggccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaactgaccagggccaatttacaatgttaggagtgcgagaccacttggctgtgctccccaggcactcccaaccaggaaagactatctgggttgaacacaagttagtgaagatcgtagatgctgtggagctagtagatgaacaagggattaacctagagctcacactggtaacgcttgacaccaacgaaaaatttagagacatcacaaaattcataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacatatgcccaatatgtttgtgccagttggagatgtggtccagtatggatttttgaaccttagtggtaagcccactcacaggactatgatgtacaattttccaactaaagcaggacagtgtggtggtgttgtgactgccgtgggtaaagtgattgggatccacattggtggtaacggtaggcaaggtttctgcgctgccctgaagaggggatacttttgcagtgaacaaggtgagatccaatggatgaagcccaacaaagaaactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtctttcacgatgtgtttgagggcactaaagagccagcagtgcttactagtaaagacccaaggctggaggttgactttgaacaggctcttttttcaaaatacgtgggaaacacgcttcatgaacccgatgagtttgtcaaggaggcggccttacattatgccaaccaactcaagcagttagatatcaagaccaccaagatgaacatggaggatgcttgttacggtacagagaacttggaagctatagatcttcatacaagtgcaggatatccatacagtgcactaggcatcaagaaaagggatattttggacccaacaactcgtgatgtcagcaagatgaaattctacatggacaagtatgggttggatctaccgtactctacttatgttaaagatgaactcagggccatcgacaagattaagaaaggaaagtctcgtctcatagaagcgagcagtctaaatgactcagtgtacttgagaatgacatttgggcacctttatgaagcttttcatgccaatccaggtacagtcactggttcagctgttggatgcaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcgtttgactactcggggtatgacgctagcctcagcccagtgtggttcagggcgctggagatagtcctgcgggaaattggatactctgaggacgcagtgtctctcatagaagggattaatcacacccaccacgtgtaccgcaataaaacttattgtgttcttgggggaatgccctcaggttgctcaggcacctccattttcaactcgatgatcaacaacatcattattaggacactcctgattaaaacattcaaagggatagatctagatgaattgaacatggtagcctacggggatgatgtgttggctagttaccccttcccaattgactgtctggaattggcgagaacaggcaaggagtatggtttaactatgacccctgccgacaagtcaccctgctttaatgaagtcacatgggagaatgccactttcttgaagagaggattcttgcctgatcatcaattcccgttcctcatccaccccacgatgccaatgagggagattcacgagtccatccgttggaccaaagatgcacgaagtactcaagatcatgtgcgctccctctgcttattagcatggcacaacgggaaagaggagtatgaaaaatttgtgagtacaatcagatcagttccaattggaaaagcattggctataccgaattttgagaatctgagaagaaattggctcgaattgtttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagta----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AM396584.1_Human_enterovirus_71_gene_for_polyprotein_genomic_RNA_isolate_ENT/PM/SHA52
-------------------taaaa--cag-ccg-ggggtttt-t-acccacccaca-gggcccac-t-gggcgctagcactctggcactgaggtacctttgtgcgcct-gtttttact------tccc--tt----ccc-c------ga-a-gtaacttagaag--------------ctgtaaatcaac-gatcaa-tagtaggtgtgacacaccagtcgtaccttga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaatgaggcagagtgtttcgttcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcaaa-------gaattggtaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccat-----tatcact--------------gaaggctgtgatc-actctcaaattcattttgattctcaacacaatcaag-----catgggctcacaggtgtccacacaacgctccggttcgcatgaaaactctaactcagctaccg-agggttccactataaattatactaccattaattactataaagactcctatgccgccacagcaggtaaacagagccttaagcaggacccagacaagtttgcaaatcctgtcaaagacatctttactgaaatggcagcgccattaaaatctccatctgctgaggcatgtggttacagcgaccgggtagcacaattaactattggcaactctaccatcactacgcaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgctcggattctgacgctacagcagtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattggacactaaattgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaatgcacagttccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagtcgctgtcctcccagagtatgtcattgggacagtagcaggtggcacagggacgg------aggatagccaccccccatacaagcagactcaacccggtgctgatggcttcgaattgcaacacccatacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggatcaatttgaggaccaacaattgtgccacaataatagtaccgtacatgaatgcactaccctttgattctgccttgaaccattgtaactttggtctgctggttgtgcctattagcccgttagattatgaccaaggagcgacgccagtgatccccattactatcactttggccccaatgtgttctgaatttgcaggccttagacaagcagttacgcaagggtttcctactgagttgaaacctggcacaaaccaatttttaaccactgacgatggcgtctcagcacccattctgccaaactttcaccccaccccgtgtatccatatacccggtgaagttagaaacttgctagagctatgccaggtggagaccattttagaggtcaacaa----------tgtacccacgaatgccactagctta------atggaaagactgcgcttcccggtctcagcccaagccg------ggaaaggtgagctatgtgcagtgttcagagctgaccccgggcgaagtggaccatggcagtccaccttgttgggccagttgtgcgggtactacacccaatggtcaggatcactggaagtcaccttcatgttcactgggtcctttatggctactggcaagatgctcatagcatacacaccaccaggaggccccttacccaaggaccgggcgaccgccatgttgggtacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcactacagagcgcacgctcgagatggtgtgtttgactattacactacaggtttggtcagcatatggtaccagacaaattacgtggttccaattggggcacccaatacagcctatataatagcattagcggcagcccagaagaatttcaccatgaagttgtgtaaggatgctagtgatatcctacagacaggcactatccagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagcagagccctcacccgagctttaccggca--------cctacaggccaaaatacgcaggtaagcagccatcgattagatactggtaaagttccagcactccaagccgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacgatgtgttcttaattcacatagcacagctgagaccactcttgatagcttcttcagcagagcaggattagttggagagatagacctccctcttgaaggtacaac-caacccgaatgggtatgcaaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggagctgttcacctacatgcgttttgacgcagagttcacctttgttgcatgcacgcctaccggggaagttgtcccgcaattgctccaatatatgtttgtaccacccggagcccccaagccagactccagagaatctctcgcatggcaaactgccactaatccctcagtctttgtgaagctgtcagaccccccagcacaggtttcagttccattcatgtcacctgcgagcgcctatcaatggttttatgacgggtatcccacattcggtgaacataagcaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttttcagtgcggactgtaggaacctcgaagtccaagtacccattggtgatcaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgcaaccaaaactatctattcaaagccaacccaaattatgctggtaa----ctccattaaaccaactggtgccagtcgcacggcaat---caccac---------------------------------------tctcggg------------------------------------------aaatttggacagcagtccggggctatctacgtgggcaactttagagtggttaaccgtcatcttgccactcataatgactgggcaaaccttgtttgggaagacagctcccgcgacttgctcgtatcatctaccactgcccaaggttgcgacacgattgctcgttgcaattgccagacaggagtgtattactgtaactcaatgagaaaacactatccggtcagtttctcgaaacccagtttgatcttcgtagaggccagcgagtattacccggctagataccagtcacacctcatgcttgcagtgggtcactcggaaccaggggattgcggtggcattcttagatgccaacacggcgtcgtagggatagtttccaccgggggaaatggcctggtggggttcgccgatgtgagggatcttctgtggttggatgatgaggccatggagcagggcgtgtctgattacattaaa-gggcttggagatgcatttggcatggggtttacagacgcagtgtcaagagaagttgaagcattaaaaaatcacttgatcggctcggagggtgccgtggagaagattcttaagaacttagttaaactcatctctgcgctcgtcatcgtcatcaggagtgattatgatatggtcacattgacggcaacacttgccctgatcgggtgccacgggagcccttgggcctgggttaagtcgaaaacagcatcaattttgggcataccgatggctcaaaagcagagtgcctcttggttaaagaagttcaacgatgcggtgagtgccgctaaggggcttgagtggatctccaacaaaatcagcaattttatcgattggctcaaggagaaaattattccggctgctaaagagaaagtcgagtttctaaacaacctaaagcaactcccc-ttattggagaaccaaatttctaatctcgaacagtcagcagcttcgcaggaggaccttgaagcgatgtttggcaacgtgtcttatctggccca---------cttctgtcgcaaattccaacccctctatgccacggaagcaaagagggtgtacgccctagaaaagagaatgaataattacatgcagttcaagagtaaacaccgtattgaacctgtatgcctaatcatcagaggctcgcctggtactgggaagtccttggcaacggggattattgctagagctatagcagacaagtaccactccagtgtgtattccttacctccagacccagatcactttgacggatacaaacaacagattgtcactgttatggacgacctatgccaaaacccagacgggaaagacatgtcactattttgtcagatggtctccacagtggattttataccgcctatggcgtctctggaggagaagggagtctcattcacctccaagtttgtgattgcctccactaacgccagtaacatcatagtgccaacagtctcggattcagatgccatccgtcgtcggttctttatggactgcgatattgaggtgaccgattcctataagacagagctgggcaggcttgatgcagggagagcagccaggctgtgctctgagaacaacactgcaaactttaaacggtgcagtccattagtctgtgggaaagcaatccaacttagggataggaagtccaaggtgagatacagtgtggacacggtagtgagtgagcttatcagggagtataacaacagatcagttattgggaacaccattgaagctcttttccaaggaccccctaaatttagaccgataaggatt---agcctagaggagaagcccgcacctgacgctattagtgacctattagctagtgtcgatagtgaagaggttcgccaatactgt-agagatcagggatggattgtacctgattctcccaccaacgttgagcgccacttgaatagagctgtcttgattatgcaatctgtagccaccgtggtagcagttgtgtcccttgtttacgtcatctacaagttgttcgccggttttcaaggagcatattccggcgcccccaagcaaacactcaagaaaccagtgctgcgtacggcaactgtgcaggggccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaaccgaccagggccactttacaatgttaggagtgcgagaccacttggctgtgctccccagacactcccaaccaggaaagaccatctgggttgaacacaaattagtgaagatcgtagacgctgtggagctagtagatgaacaaggggttaacctagagctcacactggtaacgcttgacaccaacgaaaaatttagagacatcacaagattcataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacatatgcccagtatgtttgtgccagttggagatgtggtccagtatggatttttgaaccttagtggtaagcccactcacaggactatgatgtacaatttcccaacaaaagcaggacagtgtggtggtgctgtgactgccgtaggtaaagtgattgggattcacattggtggcaacggtagacaaggtttctgcgctgccctgaagaggggttacttttgcagtgaacaaggtgagatccaatggatgaagcccaacaaagaaactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtctttcacgatgtgttcgagggcactaaagagccagcagtgctgactagtaaagacccaaggctggaagttgattttgaacaggctcttttttcaaaatacgtgggaaacacgcttcacgaacctgacgagtttgtcaaggaggcggccttacattatgccaaccaactcaagcagttagatatcaagaccaccaagatgagcatggaggacgcttgttacggtacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcactaggcatcaagaaaagagatattttggacccaacaactcgcgatgtcagcaagatgaaattctacatggataagtatgggttggatctaccgtactctacttatgttaaagatgaactcagggctgtcgacaagatcaagaaaggaaagtgtcgactcatagaagcgagcagtctaaatgactcagtgtacttgagaatgacatttgggcacctttatgaagcttttcacgccaatccaggtacagtcactggttcagctgttggatgcaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcattcgactactctgggtatgacgctagtctcagcccagtgtggttcagggcgctggagatagtcctgcgggaaattggatactctgaggacgcagtgtctctcatagaagggatcaatcacacccaccatgtgtaccgcaataaaacttattgtgttcttgggggaatgccctcaggttgctcaggcacctccattttcaactcgatgatcaacaacatcattattaggacactcctgattaaaacattcaaagggatagatttagatgaattgaacatggtggcctatggggatgacgtgttagctagttaccccttcccaattgactgtctggaattggcaaaaacaggcaaggagtatggtttaactatgacccctgccgacaagtcaccctgctttaatgaagttacatgggaaaatgccactttcttgaagagaggattcttgcctgatcatcaattcccgttcctcatccaccccacgatgccaatgagggagattcacgaatccattcgttggaccaaagatgcacgaagtactcaagatcacgtgcgctccctctgcttattagcatggcacaacgggaaagaggagtacgaaaaatttgtgagtacaattagatcagttccaattggaaaagcattggctataccaaattttgagaatctgagaagaaattggctcgaattgtttt--aa-ttttacagttt-------------------------gtaa---------------ctgaaccc-caccagta----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB550332.1_Human_enterovirus_71_genomic_RNA_complete_genome_strain:_1095-org
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccata-gggcccac-t-gggcgctagcactctggcactgaggtacctttgtgcgcct-gtttttatt------tccc--tt----ccc-c------ga-a-gtaacttagaag--------------ctgtaaatcaac-gatcaa-tagtaggtgtgacacaccagtcataccttga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaccgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgttcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggatcggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggctttgtaccat-----tatcact--------------gaagtccgtgatc-actctcaaattcattttgactctcaacacaatcaaa-----catgggctcacaggtgtccacacaacgctccggttcgcatgaaaactctaactcagctaccg-agggttccactataaattacactaccattaactactataaagactcctatgccgccactgcaggtaaacagagccttaagcaggacccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccattaaaatctccatctgctgaggcatgtggttacagcgaccgggtagcacaattaactattggcaactctaccatcactacgcaagaagcagcaaacattatagttggctatggtgagtggccttcctactgctcggattctgacgctacagcagtggataagccaacgcgcccagatgtttcggtgaataggttttacacattggacacgaaattgtgggagaagt------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggagtctttggtcaaaatgcacagttccactacctctatcgatcagggttctgcattcacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagtcgctatccttccagagtatgtcattgggacagtagcaggtggcacagggacgg------aagatagtcaccccccttacaagcagactcaacccggtgctgatggtttcgaattgcaacacccgtacgtgctcgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtaccgtacataaacgcactgccctttgattctgccttgaaccattgtaactttggtctgctggttgtgcctattagcccgttagattatgaccaaggcgcgacgccagtgatccccattaccatcactttggccccaatgtgttctgaatttgcaggtcttagacaagcagttacgcaagggtttcctactgagctgaaacctggcacaaaccaatttttaaccactgacgatggcgtctcagcacccattctgccaaacttttaccccaccccgtgtatccatatacccggcgaagttagaaacttgctagagctatgccaggtggagaccattttagaggtcaacaa----------tgtacccacgaatgccactagctta------atggagagactgcgctttccggtctcagcccaagctg------ggaaaggtgagctatgtgcagtgttcagagctgaccccgggcgaagtggaccatggcagtccaccttgttgggccagttgtgcgggtactacacccaatggtcaggatcactggaagtcacctttatgttcactgggtcctttatggctaccggcaagatgctcatagcatacacaccaccaggaggccccttacccaaggaccgggcgaccgccatgctgggtacgcacgtcatctgggactttgggctacaatcgtctgtcacccttgtaataccatggatcagcaacactcactatagagcgcacgctcgagatggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaattacgtggtcccaattggggcacccaatacagcctatataatagcattggcggcagcccagaagaatttcaccatgaagttgtgtaaggacgctagtgatatcctacagacaggcactatccagggagataga--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagcagagcccttacccgagctctaccggca--------cctacaggccaaaatacgcaggtaagcagccatcgattagatactggtaaagttccagcactccaagccgctgaaattggagcatcatcgaatgctagtgatgagagtatgattgagacacgatgtgttcttaattcacacagcacagctgagaccactcttgacagcttcttcagcagggcaggattagttggagagatagacctccctcttgaaggcacaac-caacccgaatgggtatgcaaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggagctgttcacctacatgcgttttgacgcagagttcacctttgttgcgtgcacgcctaccgggggggttgttccgcaattgctccaatatatgtttgtaccacccggagcccccaagccagactccagagaatctctcgcatggcaaactgccactaatccctcagtctttgtgaagctgtcggaccccccagcacaggtctcagttccattcatgtcacctgcaagcgcctatcaatggttttatgacgggtatcccacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttctcagtgcggactgtagggacctcgaaatccaagtacccattagtggtcaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccaaaactatctattcaaagccaacccaaattatgctggtaa----ctccattaaaccaactggtgccagtcgcacagcaat---caccac---------------------------------------tctcggg------------------------------------------aaatttggacagcagtctggggctatctacgtgggcaacttcagagtggttaaccgccatcttgctactcataacgactgggcaaatctagtttgggaagacagctcccgcgacttgctcgtatcatctaccactgcccaaggttgtgatacgattgctcgttgcaattgccagacaggagtgtattattgtaactcaatgaggaaacactatccggtcagtttctcgaaacccagtttgatcttcgtagaggccagcgagtattacccggctagataccagtcacacctcatgctcgcagtgggtcactcggaaccaggggattgtggtggtattcttagatgccaacacggtgtcgtagggatagtttccaccggggggaacggcttggtggggttcgccgatgtgagggatcttctgtggttggatgatgaggccatggagcagggcgtatctgattacattaaa-gggcttggagacgcttttggcatggggtttacagacgcagtgtcaagagaagttgaagcattgaaaaatcacttggtcggctcagaaggtgccgtggagaagattcttaagaacttagttaaactcatctctgcgctcgtcatcgtcatcaggagtgattatgacatggtcacactgacggcaacactcgccctgatcgggtgtcacgggagcccttgggcctgggttaagtcgaaaacagcatcgattttgggcataccgatggctcagaagcagagtgcctcttggttaaagaagttcaacgatgcggcgagtgccgctaaggggcttgagtggatctccaacaaaatcagcaaatttatcgattggctcaaggagaaaatcattccggctgctaaagaaaaagtcgagtttctgaacaatctaaagcaactcccc-ttattggagaaccagatttctaatctcgaacagtcagcagcttcgcaggaggaccttgaagcaatgtttggcaacgtgtcttatctggctca---------cttctgccgcaaattccaacccctctatgccacggaagcaaagagggtgtacgccctagaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctaattatcagaggctcacctggtactgggaagtccttggcaacagggattattgctagagctatagcagacaagtaccactccagtgtgtattccctacctccagacccagatcactttgatggatacaaacaacagatcgtcactgttatggacgacctatgccaaaacccagacgggaaagacatgtcactattttgtcagatggtctccacagtggattttataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgattgcctccactaacgccagtaacatcatagtgccaacagtctcggattcagatgccatccgtcgtcggttcttcatggactgcgatattgaggtgaccgattcctacaagacagagctgggcaggctcgatgcagggagagcagccaggctgtgctctgagaacaacactgcaaactttaaacggtgcagtccattagtctgtgggaaagcaatccagcttagggataggaagtccaaggtgagatacagtgtggacacggtggtgagtgagcttatcagggagtataacaacagatcagctattgggaacaccattgaagctcttttccaagggccccctaaatttagaccgataagaatt---agcctagaggagaagcccgcacccgatgctattagtgacctattagctagtgtcgatagtgaagaggttcgccaatactgt-agagatcaggggtggattgtacctgattctcccaccaacgttgagcgccacttgagcagagctgtcttaattatgcaatctgtagccaccgtggtagcagttgtgtcccttgtttacgtcatctacaagttgttcgccggttttcaaggggcatattccggcgcccccaagcaaacactcaagaaaccagtgctgcgtacggcaactgtgcaggggccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaaccgaccagggccactttacaatgttaggagtgcgagaccacttggccgtgcttcccagacactcccaaccaggaaagaccatctgggttgaacacaaattagtgaagatcgtagatgctgtggagctagtagatgaacaaggggttaacctagagctcacactgataacgcttgacaccaacgaaaaatttagagacatcacaagattcataccagaaacaattaatcctgctagtgatgccactttagttataaatactgaacatatgcccagtatgtttgtgccagttggagatgtggtccagtatggatttttgaaccttagtggtaagcccactcataggactatgatgtacaatttcccaacaaaagcaggacagtgtggcggtgttgtgactgccgtgggtaaagtgatcgggattcacattggtggcaacggtaggcaaggtttctgcgctgccctgaagaggggatacttttgcagtgaacaaggtgagatccaatggatgaagtccaacaaagaaaccggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtctttcatgatgtgttcgagggcactaaagagccagcagtgctgactagtaaagacccaaggttggaagttgactttgaacaggctcttttttcaaaatacgtgggaaacacgcttcatgaacccgacgaatttgtcaaggaggcggccttacattatgccaaccaactcaaacagttagatatcaagaccaccaagatgagcatggaggatgcttgttacggtacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcactaggcatcaagaagaaggatattttggacccaacaactcgcgatgtcagcaggatgaaattctacatggacaagtatgggttggatctaccgtactctacttatgttaaagatgaactcagggccatcgacaagattaagaaagggaagtctcgtctcatagaagcgagcagtctaaatgactcagtgtacttgagaatgacatttgggcacctttatgaagcttttcacgccaatccaggtacagtcactggttcagctgttggatgcaacccagatgtgttttggagcaagttaccaatcctacttccaggatcgctttttgcgtttgactactcggggtatgacgctagcctcagcccagtgtggttcagggcgctggagatagtcctgcgggaaattggatactccgaggacgcagtgtctctcatagaagggatcaatcacacccaccatgtgtaccgcaataaaacttattgtgttcttggggggatgccctcaggttgctcaggtacctccattttcaactcgatgatcaacaacatcattattaggacactcctgattaaaacattcaaagggatagatctagatgaattgaacatggtggcctacggggatgatgtgttggctagttaccccttcccaattgactgtctggaattggcgagaacaggcaaggagtacggtttaactatgacccctgccgataagtcaccctgctttaatgaagtcacatgggagaatgccactttcttgaagagaggattcttgcctgatcatcaattcccgttcctcatccaccccacgatgccaatgagagagattcacgagtccattcgttggaccaaagatgcacgaaatactcaagatcacgtgcgctccctctgcttattagcatggcacaacgggaaagaggagtatgaaaaatttgtgagtacaatcagatcagttccaattggaaaagcattggctataccaaattttgagaatctgagaagaaattggctcgaattgtttt--aa-aattacagttt-------------------------gtaa---------------ctgaaccc-caccagta----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC436270.1_Enterovirus_A71_isolate_V08-2236079_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcactctggcactaaggtacctttgtgcgcct-gtttttact------tccc--tt----ccc-c------aa-a-gtaacttagaag--------------ttgtgcaccagc-gatcaa-tagcaggtgtgacacaccagtcatatcttga-tcaagtacttctg-tttccccggaccgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgttcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actcttatgttggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgtaacagagcaattgtt-----taccta----tttatt-ggttttgtaccac-----tatcact--------------gaagtctgtgacc-actctcaaattcattttgaccctcaactcaatcaaa-----catgggctcacaggtatccgcacaacgctccggttctcatgagaactccaactcagctactg-agggctccactataaattacactaccattaattactataaagactcctatgccgccacagcaggtaaacagagcctcaagcaggacccagacaagttcgcaaatcctgtcaaggacatcttcactgaaatggcggcgccattaaaatctccatccgctgaggcgtgcggttacagcgatcgggtagcacaattaactattggcaactccaccatcaccacacaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgctcggattctgacgctacagcagtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattagacaccaaactgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaacgcacagttccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagttgctgtcctcccagagtacgtcattgggacagtagcaggtggcacagggacgg------aggatagtcaccctccatacaagcagactcaacccggtgctgatggctttgagctgcaacacccgtacgtgcttgatgctggcattccaatatcacaattgacagtgtgcccacaccagtggattaacttgaggaccaacaactgtgccacaataatagtgccgtacataaacgcactaccctttgattctgccttgaaccattgtaattttggcctgctggttgtgcctattagcccattagattatgaccaaggtgcgacgccagtgattcccattactatcaccctggccccgatgtgctccgagtttgcaggccttaggcaagcagttacgcaagggtttcctactgagctgaagcctggtactaaccaatttctaactactgatgatggcgtttcagcacccatcctgccaaacttccaccccaccccgtgtatccatatacctggtgaagttagaaacttgctagagttatgccaggtggagactattttagaagtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcccaggctg------gaaaaggtgagttatgtgcagtgttcagagctgaccccgggcgaagtggaccatggcagtccaccttgttgggtcagttgtgcgggtactacacccaatggtcagggtcactggaagtcaccttcatgttcactggatcctttatggctactggcaagatgctcatagcatacacaccaccaggaggccccttacccaaggaccgggcaaccgctatgttgggtacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtgataccatggatcagtaacactcattacagagcgcacgctcgtgacggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaactacgtggtcccaattggagcacccaatacagcctatataatagcactggcggcagctcagaagaatttcacaatgaagctgtgtaaggatgctagtgatatcctgcagacaggcactattcagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagtagagccctcacccgagctctaccggca--------cctacaggccaaaacacgcaggtaagcagccatcgattggatactggcaaagttccagcgctccaagccgctgaaattggagcatcgtcaaatgctagtgatgagagtatgatcgagacgcgatgtgttcttaattcacatagcacagctgagaccactcttgatagctttttcagcagggcaggattagttggagaaatagacctccctcttgaaggcacaac-caacccgaatgggtatgcaaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggagttgttcacctacatgcgtttcgacgcagagttcacctttgttgcatgcacgcccaccggggaagtcgtcccgcagctgctccaatatatgtttgtgccacccggagcccccaagccagactccagggaatctcttgcatggcaaactgccactaatccttcagtctttgtgaagctgtcagaccccccagcacaggtttcagttccgttcatgtcacctgcgagcgcctaccaatggttctatgacgggtatcccacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttctcggtgcggactgtaggaacctcgaagtccaagtacccactggtgatcaggatttacatgaggatgaagcacgtcagggcgtggatacctcgtccaatgcgtaaccaaaattatttattcaaagccaatccaaattatgctggcaa----ctccattaaaccaactggcgccagtcgcacagcaat---caccac---------------------------------------cctcggg------------------------------------------aaatttggacaacagtccggggccatctacgtgggcaacttcagagtggtcaaccgccatcttgccacttataatgactgggcaaatcttgtttgggaagacagctcccgtgatctactcgtatcatctaccactgcccaaggttgtgacacgattgctcgttgcaattgccagacaggagtgtattattgtaactcaatgagaaaacactatccagtcagtttctcgaaacccagcttgatctttgtagaggccagcgagtattacccggctagataccagtcgcacctcatgcttgcagtgggtcactcagaaccaggggattgcggtggcattcttagatgccaacacggcgttgtaggaatagtttccaccgggggaaacggcctggtggggttcgccgatgtgagggacctcctgtggttggatgatgaggctatggagcagggcgtgtctgattacatcaaa-gggcttggagatgcttttggcatggggtttacagacgcagtgtcaagagaagttgaagcattgaaaaatcacttgattggctcagagggtgctgtggagaaaattcttaagaacttagttaaactcatctctgcgctcgttattgtcatcaggagtgattatgacatggtcacattgacggcaacacttgccctgatcgggtgccacgggagcccctgggcctgggttaaatcgaaaacagcatcaattttgggcattccgatggctcagaagcagagtgcctcttggttgaagaagttcaatgatgcggcgaatgccgctaaggggcttgagtggatctccaacaaaatcagcaaatttatcgattggcttaaggagaaaattgttccggctgctagagagaaagtcgagtttctaaataatctaaagcagcttccc-ttgttggagaaccaaatttccaatctcgaacagtcagcagcttcgcaggaggaccttgaagcgatgttcggcaacgtgtcttatctggccca---------cttctgccgcaaattccaacccctctatgccacggaagcgaagagggtgtacgccctggaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctaatcatcaggggctcgcctggtactgggaagtccttggcaacagggattattgctagagctatagcagacaagtatcactccagtgtgtattccttacctccggacccagaccactttgacgggtataaacaacagatcgtcactgttatggatgacctatgccaaaacccagatgggaaggacatgtcgctattttgtcagatggtctccacagtggattttataccgcctatggcatctctggaagaaaagggagtatcattcacttccaagtttgtgatcgcctccactaacgccagcaatatcatagtgccaacagtctcggattcagatgccattcgccgccggttctttatggactgtgacattgaggtaactgattcctataagacagaactgggtaggctcgatgcagggagagcagctaggctgtgttctgagaacaacactgcaaactttaaacggtgcagtccattggtctgcgggaaagcaatccagcttagggataggaagtctaaggtgagatacagcttggacacggtagtgagtgagcttgtcagggagtataacaacagatccgttattgggaacaccattgaagctctcttccaaggaccccctaaatttagaccgataaggatt---agcctagaggagaagcctgcgcctgacgctattagtgacctattagctagcgttgatagtgaagaggtccgccaatactgt-agagaccagggatggattgtacctgactcccccaccaatgttgagcgccacctaagtagagctgtcttgattatgcaatctgtggccaccgtggtagcagttgtgtcccttgtttacgttatctacaagttgttcgctggctttcaaggagcatattccggcgcccccaagcaaacacttaagaaaccagtgctgcgcacggcaactgtgcaagggccgagcttggacttcgccctatctctacttaggagaaacattaggcaggtccaaaccgaccagggtcactttacaatgttaggagtgcgagaccacttggctgtgctccccaggcactcccaaccaggaaaaaccatctgggttgaacacaagttggtgaagatcgtagatgctgtagagctagtagatgaacaaggggttaacctggagctcacattggtaacgcttgacaccaacgaaaaatttagagacatcacaagattcataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacacatgcccagtatgtttgtgccagttggagatgtggtccagtatggatttttgaatcttagtggtaaacccactcacaggactatgatgtacaattttccaactaaagcaggacagtgtggtggtgttgtgactgccgtgggcaaagtgattgggatccacattggtggcaacggtaggcaaggcttctgcgccgctttgaagagaggatacttttgcagtgagcagggtgagatccaatggatgaaacccaacaaagagactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtcttctacgatgtgttcgagggcaccaaagagccagcggtgcttactagcaaagactcaaggctggaagttgactttgaacaggctcttttctctaaatacgtgggaaacacgctccatgagcccgacgagtttgtcaaggaggcggccttacattatgctaatcaactcaagcagttagatatcaagaccaccaagatgagtatggaggatgcttgttacggtacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcactaggcatcaagaagagggatattttggacccaacaactcgtgatgtcagcaagatgaaattctacatggacaagtacgggttggatttaccgtactccacttatgttaaagacgaactcagggcaatcgacaaggtcaagaaaggtaagtctcgtcttatagaagcaagcagtctaaatgattcagtgtacttgagaatgacatttgggcacctttatgaagcttttcacgccaacccaggtacagtcactggctcagctgttggatgcaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcgtttgactactcgggatatgatgctagtcttagcccagtgtggttcagagcgctggagatagtcctgcgggaaattggatactctgaggacgcagtgtctctcatagaagggatcaatcacacccatcatgtgtaccgcaacacaacttattgtgttcttgggggaatgccctcaggttgctcaggcacctccattttcaactcgatgatcaacaacatcattattaggacactcctgattaaaacattcaaagggatagatctggatgaattgaacatggtggcttacggggatgatgtattggctagttacccattcccaattgactgtctggaattggcgaaaacaggcaaggagtatggtttaaccatgacccctgccgacaagtcaccctgcttcaacgaagtcacatgggaaaatgccactttcttgaagagaggattcttgcccgatcaccaattcccattcctcatccaccccacgatgccaatgagggagattcacgagtccattcgttggactaaagacgcacgaagtactcaagatcatgtgcgctccctctgcttattagcatggcacaatgggaaagaagagtatgaaaaatttgtgagtacaatcagatcagttccaattggaaaagcattggctataccgaattttgagaatttgagaaggaattggctcgaattgtttt--aa-acttacagttt-------------------------gtaa---------------ctggaccc-caccagta----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ172159.1_Human_enterovirus_71_isolate_NUH0075/SIN/08_complete_genome
----------------------------------------------------------------c-t-gggcgctagcactctggcactaaggtacctttgtgcgcct-gtttttact------tccc--tt----ccc-c------aa-a-gtaacttagaag--------------ttgtgcaccagc-gatcaa-tagcaggtgtgacacaccagtcatatcttga-tcaagtacttctg-tttccccggaccgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgttcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccac-----tatcact--------------gaagtctgtgacc-actctcaaattcattttgaccctcaactcaatcaaa-----catgggctcacaggtatccgcacaacgctccggttctcatgagaactccaactcagctactg-agggctccactataaattacactaccattaattactataaagactcctatgccgccacagcaggtaaacagagcctcaagcaggacccagacaagttcgcaaatcctgtcaaggacatcttcactgaaatggcggcgccattaaaatctccatccgctgaggcgtgcggttacagcgatcgggtagcacaattaactattggcaactccaccatcaccacacaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgctcggattctgacgctacagcagtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattagacaccaaactgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaacgcacagttccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagttgctgtcctcccagagtacgtcattgggacagtagcaggtggcacagggacgg------aggatagtcaccctccatacaagcagactcaacccggtgctgatggctttgagctgcaacacccgtacgtgcttgatgctggcattccaatatcacaattgacagtgtgcccacaccagtggattaacttgaggaccaacaactgtgccacaataatagtgccgtacataaacgcactaccctttgattctgccttgaaccattgtaattttggcctgctggttgtgcctattagcccattagattatgaccaaggtgcgacgccagtgattcccattactatcaccctggccccgatgtgctccgagtttgcaggccttagacaagcagttacgcaagggtttcctactgagctgaagcctggtactaaccaatttctaactactgatgatggcgtttcagcacccatcctgccaaacttccaccccaccccgtgtatccatatacctggtgaagttagaaacttgctagagttatgccaggtggagactattttagaagtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcccaggcag------gaaaaggtgagttatgtgcagtgttcagagctgaccccgggcgaagcggaccatggcagtccaccttgttgggtcagttgtgcgggtactacacccaatggtcagggtcactggaagtcaccttcatgttcactggatcctttatggctactggcaagatgctcatagcatacacaccaccaggaggccccttacccaaggaccgggcaaccgctatgttgggtacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtgataccatggatcagtaacactcattacagagcgcacgctcgtgacggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaactacgtggtcccaattggagcacccaatacagcctatataatagcactggcggcagctcagaagaatttcacaatgaagctgtgtaaggatgctagtgatatcctgcagacaggcactattcagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagtagagccctcacccgagctctaccggca--------cctacaggccaaaacacgcaggtaagcagccatcgattggatactggcaaagttccagcgctccaagccgctgaaattggagcatcgtcaaatgctagtgatgagagtatgatcgagacgcgatgtgttcttaattcacatagcacagctgagaccactcttgatagctttttcagcagggcaggattagttggagaaatagacctccctcttgaaggcacaac-caacccgaatgggtatgcaaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggagttgttcacctacatgcgtttcgacgcagagttcacctttgttgcatgcacgcccaccggggaagtcgtcccgcagctgctccaatatatgtttgtgccacccggagcccccaagccagactccagggaatctcttgcatggcaaactgccactaacccttcagtctttgtgaagctgtcagaccccccagcacaggtttcagttccgttcatgtcacctgcgagcgcctaccaatggttctatgacgggtatcccacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttctcggtgcggactgtaggaacctcgaagtccaagtacccactggtgatcaggatttacatgaggatgaagcacgtcagggcgtggatacctcgtccaatgcgtaaccaaaattatttattcaaagccaatccaaattatgctggcaa----ctccattaaaccaactggcgccagtcgcacagcaat---caccac---------------------------------------cctcggg------------------------------------------aaatttggacaacagtccggggccatctacgtgggcaacttcagagtggtcaaccgccatcttgccactcataatgactgggcaaatcttgtttgggaagacagctcccgcgatctactcgtatcatctaccactgcccaaggttgtgacacgattgctcgttgcaattgccagacaggagtgtattattgtaactcaatgagaaagcactatccagtcagtttctcgaaacccagcttgatctttgtagaggccagcgagtattacccggctagataccagtcgcacctcatgcttgcagtgggtcactcagaaccaggggattgcggtggcattcttagatgccaacacggcgttgtaggaatagtttccaccgggggaaacggcctggtggggttcgccgatgtgagggacctcctgtggttggatgatgaggctatggagcagggcgtgtctgattacatcaaa-gggcttggagatgcttttggcatggggtttacagacgcagtgtcaagagaagttgaagcattgaaaaatcacttgattggctcagagggtgctgtggagaaaattcttaagaacttagttaaactcatctctgcgctcgttattgtcatcaggagtgattatgacatggtcacattgacggcaacacttgccctgatcgggtgccacgggagcccctgggcctgggttaaatcgaaaacagcatcaattttgggcattccgatggctcagaagcagagtgcctcttggttgaagaagttcaatgatgcggcgaatgccgctaaggggcttgagtggatctccaacaaaatcagcaaatttatcgattggcttaaggagaaaattgttccggctgctagagagaaagtcgagtttctaaataatctaaagcagcttccc-ttgttggagaaccaaatttccaatctcgaacagtcagcagcttcgcaggaggaccttgaagcgatgttcggcaacgtgtcttatctggccca---------cttctgccgcaaattccaacccctctatgccacggaagcgaagagggtgtacgccctggaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctaatcatcaggggctcgcctggtactgggaagtccttggcaacagggattattgctagagctatagcagacaagtatcactccagcgtgtattccttacctccggacccagaccactttgacgggtataaacaacagatcgtcactgttatggatgacctatgccaaaacccagatgggaaggacatgtcgctattttgtcagatggtctccacagtggattttataccgcctatggcatctctggaagaaaagggagtatcattcacttccaagtttgtgatcgcctccactaacgccagcaatatcatagtgccaacagtctcggattcagatgccattcgccgccggttctttatggactgtgacattgaggtaactgattcctataagacagaactgggtaggctcgatgcagggagagcagctaggctgtgttctgagaacaacactgcaaactttaaacggtgcagtccattggtctgcgggaaagcaatccagcttagggataggaagtctaaggtgagatacagcttggacacggtagtgagtgagcttgtcagggagtataacaacagatccgttattgggaacaccattgaagctctcttccagggaccccctaaatttagaccgataaggatt---agcctagaggagaagcctgcgcctgacgctattagtgacctattagctagcgttgatagtgaagaggtccgccaatactgt-agagaccagggatggattgtacctgactcccccaccaatgttgagcgccacctaagtagagctgtcttgattatgcaatctgtggccaccgtggtagcagttgtgtcccttgtttacgttatctacaagttgttcgctggctttcaaggagcatattccggcgcccccaagcaaacacttaagaaaccagtgctgcgcacggcaactgtgcaggggccgagcttggacttcgccctatctctacttaggagaaacattaggcaggtccaaaccgatcagggtcactttacaatgttaggagtgcgagaccacttggctgtgctccccaggcactcccaaccaggaaaaaccatctgggttgaacacaagttagtgaagatcgtagatgctgtagagctagtagatgaacaaggggttaacctggagctcacattggtaacgcttgacaccaacgaaaaatttagagacatcacaagattcataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacacatgcccagtatgtttgtgccagttggagatgtggtccagtatggatttttgaatcttagtggtaaacccactcacaggactatgatgtacaattttccaactaaagcaggacagtgtggtggtgttgtgactgccgtgggcaaagtgattgggatccacattggtggcaacggtaggcaaggcttctgcgccgctttgaagagaggatacttttgcagtgagcagggtgagatccaatggatgaaacccaacaaagagactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtcttctacgatgtgttcgagggcaccaaagagccagcggtgcttactagcaaagacccaaggctggaagttgactttgaacaggctcttttctctaaatacgtgggaaacacgctccatgagcccgacgagtttgtcaaggaggcggccttacattatgctaatcaactcaagcagttagatatcaagaccaccaagatgagtatggaggatgcttgttacggtacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcactaggcatcaagaagagggatattttggacccaacaactcgtgatgtcagcaagatgaaattctacatggacaagtacgggttggatttaccgtactccacttatgttaaagatgaactcagggcaatcgacaaggtcaagaaaggtaagtctcgtcttatagaagcaagcagtctaaatgattcagtgtacttgagaatgacatttgggcacctttatgaagcttttcacgccaacccaggtacagtcactggctcagctgttggatgcaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcgtttgactactcgggatatgatgctagtcttagcccagtgtggttcagagcgctggagatagtcctgcgggaaattggatactctgaggacgcagtgtctctcatagaagggatcaatcacacccatcatgtgtaccgcaacacaacttattgtgttcttgggggaatgccctcaggttgctcaggcacctccattttcaactcgatgatcaacaacatcattattaggacactcctgattaaaacattcaaagggatagatctggatgaattgaacatggtggcttacggggatgatgtattggctagttacccattcccaattgactgtctggaattggcgaaaacaggcaaggagtatggtttaaccatgacccctgccgacaagtcaccctgcttcaatgaagtcacatgggaaaatgccactttcttgaaaagaggattcttgcccgatcaccaattcccattcctcatccaccccacgatgccaatgagggagattcacgagtccattcgttggactaaagacgcacgaagtactcaagatcatgtgcgctccctctgcttattagcatggcacaatgggaaagaagagtatgaaaaatttgtgagtacaatcagatcagttccaattggaaaagcattggctataccgaattttgagaatttgagaaggaattggctcgaattgtttt--aa-acttacagttt-------------------------gtaa---------------ctggaccc-caccagta----atc------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575941.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_2485
----------------------------------------------------------------------------------------taaggtacctttgtgcgcct-gtttttact------tccc--tt----ccc-c------aa-a-gtaacttagaag--------------ttgcgcaccaac-gatcaa-tagcaggtgtgacacaccagtcatatcttga-tcaagtacttctg-tttccccggaccgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgttcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaagcca-gtggg-tggtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggtttcgtaccac-----tatcact--------------gaagtctgtgacc-actctcaaattcattttgaccctcaactcaatcaaa-----catgggctcacaggtatccgcacaacgctccggttctcatgagaactccaactcagctactg-agggctccactataaattacactaccattaattactataaagactcctatgccgccacagcaggtaaacagagcctcaagcaggacccagacaagttcgcaaatcctgtcaaggacatcttcactgaaatggcggcgccattaaaatctccatccgctgaggcgtgcggttacagcgatcgggtagcacaattaactattggcaactctaccatcaccacacaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgttcggattctgacgctacagcagtggacaaaccaacgcggccagatgtttcggtgaataggttttacacattagacaccaaactgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaacgcacagttccattacctctatcggtcagggttctgcatccacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagttgctgtcctcccagaatacgtcattgggacagtagcaggtggcacggggacgg------aggatagtcaccctccatacaagcagactcaacccggtgctgatggctttgagttgcaacacccgtacgtgcttgatgctggcattccaatatcacaattgacagtgtgcccacaccagtggattaatttgaggaccaacaactgtgccacaataatagtgccgtacataaatgcactaccctttgattctgccttgaaccattgtaattttggcctgctggttgtgcccattagcccattagattatgaccaaggtgcgacgccagtgattcccattactatcaccctggccccgatgtgttccgagtttgcaggccttagacaagcagttacgcaagggcttcctactgagctgaaacctggtacaaaccaatttctaactactgacgatggcgtttcagcacccatcctgccaaacttccaccccaccccgtgtatccatatacctggtgaagttagaaatttgctagagttatgccaggtggagactattttagaagtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcccaggctg------gaaaaggtgagttatgtgcagtattcagagctgaccccgggcgaagcggaccatggcagtccaccttgttgggtcagttgtgcgggtactacacccaatggtcagggtcactggaagtcaccttcatgttcactggatcctttatggctactggcaagatgctcatagcatacacaccaccaggaggccccttacccaaggaccgggcaaccgctatgttgggtacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtgataccatggatcagtaacactcattacagagcgcacgctcgtgacggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaactacgtggtcccaattggagcacccaatacagcctatataatagcactggcggcagctcagaagaatttcaccatgaaattatgtaaggatgccagtgatatcttacagacaggcactattcaaggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagcagagccctcacccgagctctaccggca--------cctacaggccaaaacacgcaggtaagcagccatcgattggacactggtaaagttccagcgctccaagccgctgaaattggagcatcatcaaatgctagtgatgagagtatgatcgagacacgatgtgttcttaattcacatagcacagctgagaccactcttgatagctttttcagcagggcaggattagttggagaaatagaccttcctcttgaaggcacaac-caacccgaatgggtatgcaaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggagttgttcacctacatgcgtttcgacgcagagttcacctttgttgcatgcacgcccaccggggaagtcgtcccgcagctgctccaatatatgtttgtaccacccggagcccccaagccagactccagggaatctctcgcatggcaaactgccactaatccttcagtctttgtgaagctgtcagaccccccagcacaggtttcagttccgttcatgtcacctgcgagcgcctaccaatggttctatgacgggtatcccacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttctcagtgcggactgtaggaacctcgaagtccaagtacccactggtgatcaggatttacatgaggatgaagcacgtcagggcgtggatacctcgtccaatgcgcaaccaaaattatctattcaaagccaatccaaattatgctggcaa----ctccatcaaaccaactggcgccagtcgcacagcaat---caccac---------------------------------------cctcggg------------------------------------------aaatttggacaacagtccggggccatctacgtgggcaacttcagagtggtcaaccgccatcttgccactcataatgattgggcaaatcttgtttgggaagacagctcccgcgatctactcgtatcatctaccactgcccaaggttgtgacacgattgctcgttgcaattgccagacaggagtgtattattgtaactcaatgagaaaacactatccagtcagcttctcgaaacccagcttgatctttgtagaggccagcgagtattacccggctagataccagtcgcacctcatgcttgcagtgggtcactcagaaccaggggattgcggtggcattcttagatgccaacacggcgtcgtaggaatagtttccaccgggggaaacggcctggtggggttcgctgatgtgagggacctcctgtggttggatgatgaggctatggagcagggcgtgtctgattacatcaaa-gggcttggagatgcttttggcatggggtttacagacgcagtgtcaagagaagttgaagcattgaaaaatcacttgattggctcagagggtgctgtggagaaaattcttaagaacttagtcaaactcatctctgcgctcgttattgtcatcaggagtgattatgacatggtcacactgacggcgacacttgccctgatcgggtgccacgggagcccttgggcctgggttaaatcgaaaacagcatcaattttgggcattccgatggctcagaagcagagtgcctcttggttgaagaagttcaatgatgcggcgagtgccgctaaggggcttgagtggatctctaacaaaatcagcaaatttatcgattggctcaaggagaaaattgttccggctgctagagagaaggtcgagtttctaaataatctaaagcagcttccc-ttgttggagaatcaaatttccaatctcgaacagtcagcagcttcgcaggaggaccttgaagcgatgttcggcaacgtgtcttatctggccca---------cttctgccgcaaattccaacccctctatgccacggaagcgaagagggtgtacgccctggaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctaatcatcaggggctcgcctggtactgggaagtccttggcaacagggattattgctagagctatagcagacaagtatcactccagtgtgtattccttacctccggacccagaccactttgacgggtataaacaacagatcgtcactgttatggatgacctatgccaaaacccagacgggaaggacatgtcactattttgtcagatggtctccacagtggattttataccgcctatggcatctctggaagaaaagggagtctcattcacctccaagtttgtgatcgcctccactaacgccagcaatatcatagtgccaacagtctcggattcagatgccattcgccgtcggttctttatggactgtgacattgaggtaactgattcctacaagacagaactgggtaggctcgatgcaggaagagcagctaggctgtgttctgagaacaacactgcaaactttaaacggtgcagtccattggtctgcgggaaagcaatccagcttagggataggaagtccaaggtgagatacagtttggacacggtagtgagtgagcttgtcagggagtataacaacagatccgttattgggaacaccattgaagctctcttccagggaccccctaaatttagaccgataaggatt---agcctagaggagaagcctgcacctgatgctattagtgacctattagctagcgttgatagtgaagaggtccgccaatactgt-agagaccagggatggattgtacctgactcccccaccaatgttgagcgccacctaagtagagctgtcttgattatgcaatctgtggccaccgtggtagcagttgtgtcccttgtttacgttatctacaagttgttcgccggctttcaaggagcatattccggcgcccccaagcaaacactcaagaaaccagtgctgcgcacggcaactgtgcaggggccgagcttggacttcgccctatctctgcttaggagaaacattaggcaggtccaaaccgatcagggccactttacaatgttaggagtgcgagaccacttggctgtgctccccaggcactcccaaccaggaaaaaccatctgggttgaacacaagttagtgaagatcgtagatgctgtagagctagtagatgaacaaggggttaacctggagctcacattggtaacgcttgacaccaacgaaaaatttagagacatcacaagatttataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacatatgcccagtatgtttgtgccagttggagatgtggtccagtatggatttttgattcttagtggtaaacccactcacaggactatgatgtacaattttccaactaaagcaggacagtgtggtggtgttgtgactgccgtgggcaaagtgattgggatccacattggtggcaacggtagacaaggcttctgcgccgccttgaagagaggatacttttgcagtgagcagggtgagatccaatggatgaaacccaacaaagaaactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtcttccacgatgtgttcgagggcaccaaagagccagcggtgcttactagcaaagacccaaggctggaagttgactttgaacaggctcttttctctaaatacgtgggaaacacgctccatgagcccgacgagtttgtcaaggaggcggccttacattatgctaatcaactcaagcagttagatatcaagaccaccaagatgagtatggaggatgcttgttacggtacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcactaggcatcaagaagagggatattttggacccaacaactcgtgatgtcagcaagatgaagttctacatggacaagtacgggttggatctaccgtactccacttatgttaaagatgaacttagggcaatcgacaagatcaagaaaggtaagtctcgccttatagaagcaagcagtctaaatgattcagtgtacttgagaatgacatttgggcacctttatgaagcttttcacgccaacccaggtacagtcactggctcagctgttggatgcaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcgtttgactactcgggatatgatgctagtcttagcccagtgtggttcagagcgctggagatagtcctgcgggaaattggatactctgaagacgcagtgtctctcatagaagggatcaatcacacccatcatgtgtaccgcaacacaacctattgtgttcttgggggaatgccctcaggttgctcaggcacctccattttcaactcgatgatcaacaacatcattattaggacactcctgattaaaacattcaaagggatagacctggatgaattgaacatggtggcttacggggatgatgtattggctagttaccccttcccaattgactgtctggaattggcgaaaacaggcaaggagtatggtttaaccatgacccctgccgacaagtcaccctgcttcaatgaagtcacatgggaaaatgccactttcttgaagagaggattcttgcccgatcatcaattcccattcctcatccaccccacgatgccaatgagggagattcacgagtccattcgttggactaaagacgcacgaagtactcaagatcatgtgcgctctctctgcttattagcatggcacaatgggaaagaagagtatgaaaaatttgtgagtacaatcagatcagttccaattggaaaagcattggctataccgaattttgagaatttgagaaggaattggctcgaattgtttt--aa-acttgcagttt-------------------------gtaa---------------ctggacc-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ647167.1_Human_enterovirus_71_isolate_EV054_07_complete_genome
------------------ttaaaa--cag--ct-gtgggttg-c-acccacccacg-gggcctac-t-gggcgctagcactctggcactaaggtacctttgtgcgcct-gtttttact------tcct--tt----ccc-c------ga-a-gtaacttagaag--------------ttgtgtaccaac-gatcaa-tagcaggtgtgacacaccagtcatatcttga-tcaagtacttctg-tttccccggaccgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgttcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtg-aacagagcaattgtt-----taccta----tttatt-ggtttcgtaccac-----tatcact--------------gaactctgtggtc-actctcaaattcattttgaccctcaactcaatcaaa-----catgggctcacaggtgtccacacaacgctccggttctcatgagaactccaactcagctactg-agggctccactataaattacactaccattaattactataaagactcctatgccgccacagcaggtaaacagagcctcaagcaggacccagacaagttcgcaaatcctgtcaaggacatcttcactgaaatggcggcgccattaaaatctccatccgctgaggcgtgcggttacagcgatcgagtagcacaattaactattggcaactctaccatcaccacacaagaagcagcaaacatcatagttggctatggtgagtggccctcctactgctcggattctgacgctacagcagtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattagacaccaaactgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaacgcacagttccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagtcgctgtcctcccagagtacgtcattgggacagtagcaggtggcacagggacgg------aggatagccaccctccatacaagcagactcaacccggtgctgatggctttgagttgcaacacccgtacgtgcttgatgctggcattccaatatcacaattgacagtgtgcccacatcagtggattaatctgaggaccaacaattgtgccacaataatagtgccgtacataaacgcactaccctttgactctgccttgaaccattgtaatttcggcctgctggttgtgcctattagcccgttagactatgaccaaggtgcgacgccagtgatccccattactatcaccctggccccgatgtgctccgagtttgcgggccttagacaagcagtcacgcaagggtttcctactgagctgaaacctggtacaaaccaatttctaactactgacgatggcgtttcagcacccatcctgccaaacttccaccccaccccgtgtatccatatacctggtgaagttagaaatttgctagagttatgccaggtggagactattttagaagtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcccaggccg------gaaaaggtgagttatgtgcagtgttcagagctgaccccgggcgaagcggaccatggcagtccaccttgttgggccagttgtgcgggtactacacccaatggtcagggtcactggaagtcaccttcatgttcactggatcctttatggctactggcaagatgctcatagcatacacaccaccaggaggccccttacccaaggaccgggcaaccgctatgttgggtacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtgataccatggatcagtaacactcattacagagcgcacgctcgtgacggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaactacgtggtcccaattggagcacccaatacagcctacataatagcattggcggcagctcagaagaatttcaccatgaagttgtgtaaggatgccagtgatatcctgcagacaggcactattcagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagcagagccctcacccgagctctaccggca--------cctacaggccaaaatacgcaggtaagcagccatcgattggatactggcaaagttccagcgctccaagctgctgaaattggtgcatcatcaaatgctagtgatgagagtatgatcgagacgcgatgtgttcttaattcacatagcacagctgagaccactcttgatagctttttcagcagagcaggattagttggagaaatagacctccctcttgaaggcacaac-caacccgaatgggtatgcaaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagttgttcacctacatgcgtttcgacgcagagttcacctttgttgcatgcacgcccaccggggaagtcgtcccgcagctgctccaatatatgtttgtaccacccggagcccccaagccagactccagggaatctctcgcatggcaaactgccactaatccttcagtctttgtgaagctgtcagaccccccagcacaggtctcagtcccgttcatgtcacctgcgagcgcctaccaatggttttatgacgggtatcccacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttctcagtgcggactgtaggaacctcgaagtccaagtacccactggtgatcaggatttacatgaggatgaagcacgtcagggcgtggatacctcgtccaatgcgcaaccaaaattatctattcaaagccaatccaaattatgctggcaa----ctccatcaaaccaactggcgccagtcgcacagcaat---caccac---------------------------------------cctcggg------------------------------------------aaatttggacaacaatccggggccatctacgtgggcaacttcagagtggtcaaccgccatcttgccactcataatgactgggcaaatcttgtttgggaagacagctcccgcgatctactcgtatcatctaccactgcccaaggttgtgacacgattgctcgttgtaattgccagacaggagtgtattattgtaactcaatgagaaaacactatccagtcagtttttcgaaacccagcttgatcttagtagaggccagcgagtattacccggctagataccagtcgcacctcatgcttgcagtgggtcactcagagccaggggattgcggcggcattcttagatgccaacacggcgtcataggaatagtttccaccggggggaacggtctggtggggttcgccgatgtgagggacctcctgtggttggatgatgaggctatggagcagggcgtgtctgattacatcaaa-gggcttggagatgcttttggcatggggttcacagacgcagtgtcaagagaagttgaagcattgaaaaatcacttgattggttcagagggtgctgtggagaaaattcttaagaacttagtcaaactcatctctgcgctcgttattgtcatcaggagtgactatgacatggtcacattgacggcaacacttgccctgatcgggtgccacgggagcccctgggcctgggttaaatcgaaaacagcatcaattttgggcattccgatggctcagaagcagagtgcctcttggttgaagaagttcaatgacgcggcgagtgccgctaaggggcttgagtggatctccatcaaaatcagcaagtttatcgattggctcaaggagaaaattattccggctgctagagagaaagtcgagtttctaaacaatctaaagcagctcccc-ttgttggagaaccaaatttccaatctcgaacagtcagcagcttcgcaggaggaccttgaagcgatgttcggcaacgtgtcttatctggccca---------cttctgccgcaaatttcaacccctctatgctacggaagcgaagagggtgtacgccctggaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctaatcatcaggggctcgcctggtactgggaagtccttggcaacagggattattgctagagctatagcagacaagtatcactccagtgtgtattccctacctccggacccagaccactttgacgggtataaacaacagatcgtcactgttatggatgacctatgtcaaaacccagacgggaaagacatgtcactattttgtcagatggtctccacagtggattttataccgcctatggcatctctggaagagaagggagtctcattcacctccaagtttgtgatcgcctccactaacgccagtaatatcatagtgccaacagtctcggattcggatgccatacgccgtcggttctttatggactgtgacattgaggtaactgattcctataagacagaactgggtaggctcgatgcaggaagagcagctaggctgtgttctgagaacaacactgcaaactttaaacggtgcagtccattggtttgcgggaaagcaatccagcttagggataggaagtccaaggtgagatacagtttggacacggtagtgagtgagcttgtcagggagtataacaacagatccgttattgggaacaccattgaagctctcttccagggaccccctaaatttagaccgataaggatt---agcctagaggagaagcctgcacctgatgctattagtgacctattagctagcgttgatagtgaagaggtccgccaatactgt-agagaccagggatggattgtacccgactcccccaccaatgttgagcgccacttaaatagagctgccttgattatgcaatctgtggccaccgtggtagcagttgtgtcccttgtttacgttatctacaagttgttcgccggctttcaaggagcatattccggcgcccccaagcaaacacttaagaaaccagtgctgcgcacggcaactgtgcaggggccgagcttggacttcgccttatctctgcttaggagaaacattaggcaggtccaaaccgatcagggtcactttacaatgttaggagtgcgagaccacttggctgtgctccccaggcactcccaaccaggaaaaaccatctgggttgaacacaagttagtgaagatcgtagatgctgtagagctagtagatgaacaaggggttaacctggagctcacattggtaacgcttgacaccaacgaaaaatttagagacatcacaagattcataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacatatgcccagtatgtttgtgccagttggagatgtggtccagtatggatttttgaaccttagtggtaagcccactcacaggactatgatgtacaattttccaactaaagcagggcagtgcggtggtgttgtgactgccgtgggcaaagtgattgggatccacattggtggcaacggtaggcaaggtttctgcgccgccctgaagagaggatatttttgcagtgagcagggtgaaatccaatggatgaaacccaacaaagaaactggcaggttaaacatcaacggacctactcgcactaagcttgaaccaagtgtcttccacgatgtgttcgagggcaccaaagagccagcggtgcttactagcaaagacccaaggctggaagttgactttgaacaggctcttttctctaaatacgtgggaaacacgctccatgagcccgacgagtttgtcaaggaggcggccttgcattatgctaatcaactcaagcagttagatatcaagaccaccaagatgagtatggaggatgcttgttacggtacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcactaggcattaagaagagggatattttggacccaacaactcgtgatgtcagcaagatgaaattctacatggataagtatgggttggatctaccgtactccacttatgtcaaagatgaacttagggcaatcgacaagatcaagaaaggtaagtctcgtctcatagaagcaagcagtctaaatgattcagtgtacttgagaatgacatttgggcacctttatgaagcttttcacgccaacccaggcacagtcactggctcagctgttggatgtaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcgtttgactactcgggatatgacgctagtcttagcccagtgtggttcagagcgctggagatagtcctgcgggaaattggatactctgaggacgcagtgtctctcatagaagggatcaatcacacccatcatgtgtaccgcaacacaacttattgtgttcttgggggaatgccctcaggttgctcaggcacctccattttcaatacgatgatcaacaacatcattattaggacactcctgattaaaacattcaaagggatagatctggatgaattgaacatggtggcttacggggatgatgtgttggctagttaccccttcccaattgactgtctggaactggcgaaaacaggcaaggagtatggtttaaccatgacccctgccgacaaatcaccctgcttcaatgaagtcacatgggagaatgccactttcctgaagagaggattcctgcccgatcatcaattcccattcctcatccaccccacgatgccaatgagggagattcacgagtctattcgttggactaaagatgcacgaagtactcaagatcatgtgcgctccctctgcttattagcatggcacaatgggaaagaagagtatgaaaaatttgtgagcacaatcagatcagttccaattggaaaagcattggctataccgaattttgagaatttgagaaggaattggctcgaattgtttt--aa-acttacagttt-------------------------gtaa---------------ctggaccc-caccagta----atctggt------c-g-----cgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaa---------------------------------------------------------------------------------------------------------------------------------------
>JN835312.1_Human_enterovirus_71_strain_MRS/09/3663_complete_genome
------------------ttaaaa--cag-gct-gtgggttg-t-acccactcaca-gggcctac-t-gggcgctagcactctggcactaaggtgcctttgtgcgcct-gtttttact------tccc--tt----ccc-c------aa-a-gtaacttagaag--------------ttgtgtaccaac-gatcaa-tagcaggtgtgacacaccagtcatatcttga-tcaagtacttctg-tttccccggaccgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgttcagca--caa-ccccg---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----tactta----tttatt-ggtttcgtaccac-----tatcact--------------gaagtctgtgacc-attctcgaattcattttgaccctcaactcaatcaaa-----catgggctcacaagtgtccacacaacgstcsggktckcatgaaaactccaactcagctactg-agggctccactataaattacactaccattaattactataaagactcctatgccgccacagcaggtaaacagagcctcaagcaggacccagacaagttcgcaaaccctgtcaaggacatcttcactgaaatggcggcaccattaaaatctccatccgctgaggcgtgcggttacagcgatcgggtagcacaattaactattggcaactctaccatcaccacacaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgctcggattctgacgctacagcagtggacaaaccaacgcgcccagatgtttcggtaaacaggttttacacattagacaccaaactgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaacgcacagttccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagtcgctgtccttccagagtatgtcattgggacagtagcaggtggcacagggacgg------aggatagccaccctccgtacaaacagactcaacccggtgctgatggctttgagttgcaacacccgtacgtgcttgatgctggcattccaatatcacaattgacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccgtacataaacgcactaccctttgattctgccttgaaccactgtaattttggcctgctggttgtgcctattagcccattagattatgaccaaggtgcgacgccagtgattcccattactatcaccctggccccgatgtgctccgagtttgcaggccttagacaagcagttacgcaagggtttcctactgagctgaaacctggtacaaaccaatttctaactactgacgatggcgtttcagcacccatcttgccaaacttccaccccaccccgtgtatccatatacctggtgaagttagaaatctgctagagttatgccaggtggagactattttagaagtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccagtctcagcccaggccg------gaaaaggtgagttatgtgcagtgtttagagctgaccccgggcgaagcgggccatggcagtccaccttgttgggccagttgtgcgggtactacacccaatggtcagggtcactggaagtcaccttcatgttcaccggatcctttatggctactggtaagatgctcatagcatacacaccaccaggaggtcccttacccaaggaccgggcaaccgctatgttgggtacgcacgtcatctgggattttgggctgcaatcgtctgtcacccttgtgataccatggatcagcaacacgcattacagagcgcacgctcgtgacggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaactacgtggtcccaattggagcacccaatacagcctatataatagcattagcggcagctcagaagaacttcaccatgaagttgtgtaaggatgctagtgatatcctgcagacaggcactattcagggagatagg--------gtggcagacgtgattg---agagttccat--------------------------aggagacagtgtgagcagagccctcacccgagctctgccggca--------cctacaggccaaaacacgcaggtaagcagccatcgattggataccggtaaagttccagcgctccaagccgctgaaattggagcatcatcaaatgctagtgatgagagtatgatcgagacgcgatgtgttcttaattcacatagcacagctgagaccactcttgatagctttttcagcagagcaggattggttggagaaatagacctccctcttgaaggcacgac-caacccgaatgggtatgcaaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagttgttcacctacatgcgcttcgacgcagagttcacctttgttgcatgcacgcccaccggggaagtcgtcccacagctgctccaatatatgtttgtaccacccggagcccccaagccagactccagggaatctctcgcatggcaaactgccactaatccttcagtctttgtgaagctgtcagaccccccagcacaggtttcagttccgttcatgtcacctgcaagcgcctaccaatggttctatgacgggtatcccacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgcccaaataacatgatgggtacgttctcagtgcggactgtaggaacctcgaagtccaagtacccactggtgatcaggatttacatgaggatgaagcacgtcagggcgtggatacctcgtccaatgcgcaaccaaaattatctattcaaagccaatccaaattatgctggcaa----ctccatcaagccaactggcgccagtcgcacagcaat---caccac---------------------------------------tctcggg------------------------------------------aaatttggacaacagtccggggccatctacgtgggcaatttcagagtggtcaaccgccatcttgccactcataatgactgggcaaatcttgtttgggaagacagctcccgcgatctactcgtatcgtctaccactgcccaaggctgtgacacgattgctcgttgtaattgccagacaggagtatattactgtaactcaatgagaaaacactatccagtcagtttctcgaaacccagtttgatctttgtagaggctagcgagtattacccggctagataccagtcgcacctcatgcttgcagtgggtcactcagaaccaggggattgcggtggcattcttcgatgccaacacggcgtcgtgggaatagtttccaccgggggaaacggcctggtggggttcgccgatgtgagagacctcctgtggttggacgatgaggctatggagcagggcgtgtctgattacatcaaa-gggcttggagatgcttttggcatggggtttacagacgcagtgtcaagagaaattgaagcattgaaaaatcacttgattggctcagagggtgctgtggagaaaattcttaagaacttagttaaactcatctctgcgctcgttatcgtcatcaggagtgattatgacatggtcacattgacggcaacacttgccctgatcgggtgccacgggagcccctgggcctgggttaaatcgaaaacagcatcaattttgggcattccgatggctcagaagcagagtgcctcttggttgaagaagttcaacgatgcggcgagtgccgctaaggggcttgagtggatctccaacaaaatcagcaaatttatcgattggctcaaggagaaaattgttccggctgctagagagaaagttgagtttctaaacaatctaaagcagctcccc-ttgttggagaatcaaatttccaatctcgaacagtcagcagcttcgcaggaggaccttgaagcgatgttcggtaacgtgtcttatctggccca---------cttctgccgcaaattccaacccctctatgccacggaagcgaagagggtgtacgccctggaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctaatcatcaggggctcgcctggtactgggaagtccttggcaacagggattattgctagagctatagcagataaatatcactctagtgtgtattccttacctccggatccagaccactttgacgggtataaacaacagatcgtcactgttatggatgacctatgccaaaacccagacgggaaagacatgtcactattttgtcagatggtctccacagtggattttataccgcctatggcatctctggaagaaaagggagtctcattcacctccaagtttgtgatcgcctccactaacgccagtaatattatagtgccaacagtctcagactcagatgccattcgccgtcggttctttatggactgtgacattgaggtaactgattcctataagacagaactgggtaggctcgatgcaggaagagcggctaggctgtgttctgagaacaatactgcaaactttaaacggtgcagtccattggtctgcgggaaagcaatccagcttagggataggaagtctaaggtgagatacagtttggacacggtagtgagtgagcttgtcagggaatataacaacagatccgttattgggaacaccattgaagctctcttccagggrccccctaaatttagaccgataaggatt---agtctagaggagaagcctgcacctgatgctattagtgacctattagctagcgttgatagtgaagaggtccgccaatactgt-agagaccagggatggattgtacctgactcccccaccaatgttgagcgccacttaagtagagctgtcttgattatgcaatctgtggccaccgtggtagcagttgtgtcccttgtctacgttatctataagttgttcgccggctttcaaggagcatattccggcgcccccaagcaaacactcaagaaaccagtgctgcgcacggcaactgtgcaggggccgagcttggacttcgccctatccctacttaggagaaacattaggcaagtccaaaccgatcagggtcactttacgatgttaggagtgcgagaccacttagctgtgctccctaggcactcccaaccmggmaaaaccatctgggttgaacacaagttagtgaagatcgtagatgctgtggagctagtagatgaacaaggggttaatctggagctcacattggtaacgcttgacaccaacgaaaaatttagagacatcacaagattcataccagaaacaattagtcctgcttgtgatgccactttagttataaatactgaacatatgcccagtatgtttgtgccagttggagatgtggtccagtatggatttttgaaccttagtggtaagcccactcacaggactatgatgtacaattttccaactaaagcaggacagtgtggtggtgttgtgactgccgtgggcaaagtgattgggatccacattggtggcaacggtaggcaaggtttctgcgccgccttgaagagaggatacttttgcagtgagcaaggtgagatccaatggatgaagcccaacaaagaaactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtcttccacgatgtgttcgagggcaccaaagaaccagcggtgcttactagcaaagacccaaggctggaggttgactttgaacaggctcttttctctaaatacgtgggaaacacgctccatgagcccgacgagtttgtcaaggaggcggccttacattatgctaatcaactcaagcagttggatatcaagactaccaagatgagtatggaggatgcttgttacggtacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcacttggcatcaagaagagggatattttggacccaacaactcgtgatgtcagcaagatgaaattctacatggataagtacgggttggatctaccgtactccacttatgtcaaagatgaacttaggacaattgacaagatcaagaaaggtaagtctcgtctcatagaagcaagcagtctaaatgattcggtgtacttgagaatgacatttgggcacctttacgaagcttttcacgccaacccaggtacagtcactggctcagctgttggatgtaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcgtttgactactcgggatatgatgctagtcttagcccagtgtggttcagagcgctggagatagtcctgcgggaaattggatactctgaggacgcagtgtctctcatagaagggatcaatcacacccaccatgtgtaccgcaacacaacttattgtgttcttgggggaatgccctcaggttgttcaggcacctccattttcaattcgatgatcaacaacatcattattaggacactcctgattaaaacattcaaagggatagatctggacgaattgaacatggtggcttacggggatgatgtgttggctagctaccccttcccaattgactgtctggaattggcgaaaacaggcaaggagtatggtttaaccatgacccctgccgacaagtcaccctgcttcaatgaagtcacatgggaaaatgccactttcttgaagagaggattcctgcccgatcatcaattcccattcctcattcaccccacgatgccaatgagggaaattcacgagtctattcgttggactaaagacgcacgaagcactcaagatcatgtgcgctccctctgtttattagcatggcacaatgggaaagaagagtatgaaaaatttgtgagtacaatcagatcagttccaattggaaaagcattggctataccgaattttgagaatttgagaaggaattggctcgaattgtttt--aa-acttacagttt-------------------------gtaa---------------ctggaccc-caccagta----atctggt------c-g-----tttaaa------------------------aaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575948.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_10118
---------------------------------------------------------------------ggcgctagcactctggcactaaggtacctttgtgcgcct-g-ttttact------tccc--tt----ccc-c------aa-a-gtaacttagaag--------------ttgtgtgccaac-gatcaa-tagcaggtgtgacacaccagtcatatcttga-tcaagtacttctg-tttccccggaccgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccagctacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgttcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgag-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaatcaag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggtttcgtaccgc-----tatcact--------------gaagtctgtgacc-actctcgaattcattttgaccctcaactcaatcaaa-----catgggctcacaggtgtccacacaacgctccggttctcatgagaactccaactcagctactg-agggctccactataaattacactaccattaattactataaagactcctatgccgccacagcaggtaaacagagcctcaagcaggacccagacaagttcgcaaatcctgttaaggacatcttcactgaaatggcggcaccactaaaatctccatccgctgaggcgtgcggttacagcgatcgggtagcacaattaactattggcaactctactatcaccacacaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgctcggattctgacgctacagcagtggacaaaccaacgcgcccagatgtttcggtgaacaggttttacacattagacaccaaactgtgggagaagt------------------catccaaggggtggtactggaaattcccggatgtgttaactgagaccggggtctttggtcaaaacgcacagttccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagcaagttccaccaaggagcactcctagtcgctgtcctcccagagtacgtcattgggacagtagcaggtggcacagggacgg------aggatagccaccctccgtacaaacagactcaacccggtgctgatggctttgagttgcaacacccgtacgtgcttgatgctggcattccaatatcacaattgacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccgtatataaacgcactaccctttgattctgccttgaaccattgtaattttggcctgctggttgtgcctattagcccattagattatgaccaaggtgcgacgccagtgattcccattactatcaccctggccccgatgtgctccgaatttgcaggccttagacaagcagttacgcaagggtttcctactgagctgaaacccggcacaaaccaatttctaactactgacgatggcgtttcagcacccatcctgccaaacttccaccccaccccgtgtatccacatacctggtgaagttagaaatctgctagagttatgccaggtagagactattttagaagtcaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgctttccggtctcagcccaggccg------gaaaaggtgagttatgtgcagtgttcagagctgaccccgggcgaagcgggccatggcagtccaccctgttgggccagttgtgcgggtattacacccaatggtcagggtcactggaagtcaccttcatgttcaccggatcctttatggctactggcaagatgctcatagcatacacaccaccaggaggtcccttacccaaggaccgggcaaccgctatgttgggtacgcacgtcatctgggattttgggctgcaatcgtctgtcacccttgtgataccatggatcagtaacactcattacagagcgcacgctcgtgacggtgtgtttgactactacactacaggtttagttagcatatggtaccagacgaactacgtggtcccaattggagcacccaacacagcctatataatagcattggcggcagctcagaagaacttcaccatgaagttgtgtaaggatgctagtgacatcctgcagacaggcactattcagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagcagagccctcacccgagctctaccggca--------cctacaggccaaaacacgcaggtaagcagccaccgattggatactggtaaagttccagcgctccaagccgctgaaattggagcatcatcaaatgctagtgatgagagcatgatcgagacgcgatgtgttcttaattcacacagcacagctgagaccactcttgatagctttttcagcagagcaggattagttggagaaatagacctccctcttgaaggcacgac-taacccgaatgggtatgcaaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagttgttcacctacatgcgtttcgacgcagagttcacctttgttgcatgcacgcccactggggaagtcgtcccgcagctgctccagtatatgtttgtaccacccggagcccccaagccagactccagggaatctctcgcatggcaaactgccactaatccatcagtctttgtgaagctgtcagaccccccagcacaggtttcagttccgttcatgtcacctgcgagcgcctaccaatggttctatgacgggtatcctacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgcccaaataacatgatgggtacgttctcagtgcggactgtaggaacctcgaagtccaagtacccactggtgatcaggatttacatgagaatgaagcacgtcagggcgtggatacctcgtccaatgcgcaaccaaaattatctattcaaagccaatccaaattatgctggcaa----ctctatcaagccaactggcgccagtcgcacagcaat---caccac---------------------------------------tctcggg------------------------------------------aaatttggacaacagtccggggccatctacgtgggcaacttcagagtggtcaaccgccatcttgccactcataatgactgggcaaaccttgtttgggaagacagctcccgcgatctactcgtatcatctaccaccgcccaaggttgtgacacgattgctcgttgcaattgccagacaggagtatattactgtaactcaatgagaaaacactatccagtcagtttctcgaaacccagcttgatctttgtagaggctagcgagtattacccggctagataccagtcgcacctcatgctcgcagtgggtcactcagaaccaggggattgcggtggcattcttagatgccaacacggtgtcgtgggaatagtttccaccgggggaaacggcctggtggggttcgccgatgtgagagacctcctgtggttggacgatgaggctatggagcagggcgtgtctgattacatcaaa-gggcttggagatgcttttggcatgggttttacagacgcagtgtcaagagaagttgaagcattgaaaaatcacttgattggctcagagggtgctgtggagaaaattcttaagaacttagtcaagctcatctctgcgctcgttattgtcatcaggagtgattatgacatggtcacattgacggcaacacttgccctgatcgggtgccacgggagcccctgggcctgggttaaatcgaaaacagcatcaattttgggcattccgatggctcagaagcagagtgcctcctggttgaagaagttcaacgatgcggcgagtgccgctaaggggcttgagtggatctccaacaaaatcagcaaatttatcgattggctcaaggagaagattattccggctgctagagagaaagttgagtttctaaacaatctaaagcagctcccc-ttgttggagaatcaaatttccaatctcgagcagtcagcagcttcgcaggaggaccttgaagcgatgttcggcaacgtgtcttatctggccca---------cttctgccgcaaattccaacccctctatgctacggaagcgaagagggtgtacgccctggaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctaatcgtcaggggctcgcctggtactgggaagtccttggcaacagggattattgctagagctatagcagacaagtatcactctagtgtgtattccttacctccggatccagaccactttgacgggtataaacaacagatcgtcactgttatggatgacctatgccaaaacccagacgggaaagacatgtcactattttgtcagatggtctccacagtggattttataccgcctatggcatctctggaagagaagggagtctcattcacctccaagtttgtgatcgcctccactaacgctagtaatatcatagtgccaacagtctcagattcagatgccattcgccgtcggttctttatggactgtgacattgaggtaactgattcctacaagacagaattgggtaggctcgatgcggggagagcggctaggctgtgttctgagaacaacactgcaaactttaaacggtgcagtccattggtctgcgggaaagcaatccagcttagggataggaagtctaaggtgagatatagcttggacacggtagtgagtgagcttgtcagggagtataacaacagatccgttattgggaacaccattgaagctctcttccagggaccccccaaatttagaccgataaggatt---agcctagaggagaagcctgcacctgatgctattagtgacctattagctagcgttgatagtgaagaggtccgccaatactgt-agagaccagggatggattgtacctgactcccccaccaatgttgagcgccacttaagtagagctgtcttgattatgcaatctgtcgccaccgtggtagcagttgtgtcccttgtctacgttatctacaagttattcgccggctttcaaggagcatattccggcgcccccaagcaaacactcaagagaccagtgctgcgcacggcaactgtgcaggggccaagcttggacttcgccctatccctacttaggagaaacattaggcaggtccaaaccgatcagggtcactttacgatgttaggagtgcgagaccacttggctgtgctccccaggcactcccaacctggaaaaaccatctgggttgaacacaagttagtgaagatcgtagatgctgtagagctagtagatgaacaaggggttaatctggagctcacattggtaacgcttgacaccaacgaaaaatttagagacatcacaagattcataccagaaacaattagtcctgctagtgatgccactttagttataaacactgaacatatgcccagtatgtttgtgccagttggagatgtggtccagtatggatttttgaatcttagtggtaagcccactcacaggactatgatgtacaattttcctactaaagcgggacagtgtggtggtgttgtgactgccgtgggcaaagtgattgggatccacattggtggcaacggtaggcaaggtttctgcgccgccttgaagagagggtacttttgcagtgagcaaggtgagatccaatggatgaagcccaacaaagaaactggcaggttgaacatcaacggacctactcgcactaagcttgaaccaagtgtcttccacgatgtgttcgagggctccaaagagccagcggtgcttactagcaaagacccaaggctggaggttgactttgaacaggctcttttttctaaatacgtgggaaacacgctccatgagcctgacgagtttgtcaaggaggcggccttacattatgctaatcaactcaagcagttagatatcaagaccaccaagatgagtatggaagatgcttgttacggtacagagaacgtggaagctatagatcttcacacaagtgcaggatacccatacagtgcactaggcatcaagaaaagagatattttggacccaacaactcgcgatgtcagcaagatgaaattttacatggataagtatgggttggatctaccgtactccacttatgtcaaagatgaacttagggcaattgacaagatcaagaaaggtaagtctcgtctcatagaagcaagcagtctaaatgattcggtgtacttgagaatgacatttgggcacctttacgaagcttttcacgccaacccaggtacagtcactggctcagctgttggatgcaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcgtttgactactcgggatatgatgctagtcttagcccagtgtggttcagagcgctggaaatagtcctgcgggagattggatactctgaggacgcagtgtctctcatagaagggatcaatcacacccaccatgtgtaccgcaacacaacttattgtgttcttgggggaatgccctcaggttgctcaggcacctccattttcaactcgatgattaacaacatcattattaggacactcctgattaaaacattcaaagggatagatctggacgaattgaacatggtggcttatggggatgatgtgttggctagttacccctacccgattgactgtctggaattagcgaaaacaggcaaagagtatggtttaaccatgacccctgccgacaagtcaccctgcttcaatgaaattacatgggaaaatgccactttcttgaagagaggattcctgcccgatcaccaattcccattcctcatccaccccacgatgccaatgagggagattcacgagtctattcgttggactaaagacgcacgaagtactcaagatcatgtgcgctccctctgcttattagcatggcacaatgggaaagaagagtatgaaaaatttgtgagtacaatcagatcagttccaattggaaaagcattggctataccgaactttgagaatttgagaaggaattggctcgaattgtttt--aa-acttgcagttt-------------------------gtaa---------------ctggaccc-caccagca----atctggt------c-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ647169.1_Human_enterovirus_71_isolate_EV090_07_complete_genome
---------------------------------------------acccacccaca-gggcctac-t-gggcgctagcactctggcactgaggtacctttgtgcgcct-g-ttttatt------tccc--tt----ccc-c------ga-a-gtaacttagaag--------------ctgtgaactaac-gatcaa-tagtgggtgtgacgcaccagtcacatcttga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgttcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggaaaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcgtc-----taccta----tttgtt-ggttttgtaccat-----tatcact--------------gaaggctgtgatc-actctcaaattcattttgaccctcaactcaatcaaa-----catgggctcacaggtgtccacacaacgttccggttctcatgagaactccaactcagctactg-agggctccaccataaattacactaccattaattactataaagactcctatgccgccacagcaggtaaacagagcctcaagcaggacccagacaagttcgcaaatcctgtcaaggatatcttcactgaaatggcggcgccattaaaatccccatccgctgaggcatgcggttacagcgatcgggtagcacaactaactattggcaactctaccatcaccacacaagaagcagcaaacatcatagttggctacggtgagtggccttcctactgctcagattctgacgctacggcagtggacaaaccaacgcgcccagatgtttcggtgaataggttctacacattggacactaaactgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaacgcacagttccactacctttatcgatcagggttctgcattcatgtgcagtgcaatgctagtaagttccaccaaggagcactcctagtcgctgtcctcccagagtatgtcatcgggacagtagcaggtggcacagggacgg------aagatagccatcccccatacaagcagactcaacccggtgctgatggcttcgaattacaacacccgtacgtgcttgatgctggcatcccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccgtacataaacgcgctaccttttgattctgccttgaaccattgtaattttggcctgctggttgtgcctattagtccattagattatgaccaaggtgcgacgccggtgatccccattgctattaccctggcccctatgtgctctgagtttgccggccttagacaagcagttacgcaagggtttcccactgagctgaaacctggtacaaaccaatttttaaccactgacgatggcgtctcagcacccatcctgcctaacttccaccccaccccgtgcatccatatacccggtgaagttagaaacttactagagctatgccaggtggagaccatcttagaagtcaacaa----------tgtgcccacaaatgccactagctta------atggagagactgcgcttcccggtctcagcccaggccg------gaaaaggtgagctatgtgcagtattcagagctgaccccgggcggagtggaccatggcagtccaccttgttgggccaattatgtgggtactacacccaatggtcagggtcactggaagttaccttcatgtttactgggtcctttatggctactggcaagatgctcatagcgtacacaccaccaggaggtcccttacccaaggatcgcgcgaccgctatgttgggtacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtgataccatggatcagcaacactcactacagagcgcacgctcgagatggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaattacgtggtcccaattggagcacccaatacagcctatataatagcattggcggcagctcagaagaatttcaccatgaggttgtgtaaggatgctagtgatatcctacagacaggcactattcagggagatagg--------gtggcagatgtgattg---agagttccat--------------------------aggggacagtgtgagcagagccctcactcgagctctaccggca--------cccacaggccaaaacacgcaggtaagcagccatcgattggacactggtaaagttccagcgctccaagccgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgaaacgcgatgtgttcttaattcacatagcacagctgagaccactcttgatagctttttcagtagagcagggttagttggagagatagacctccctcttgaaggtacaac-caacccgaatgggtatgcaaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggaattgttcacctacatgcgttttgacgcagagttcacctttgttgcatgcacgcctaccggggaagttgtcccgcaattgctccagtatatgtttgtaccacccggagcccccaagccagactccagggaatctctcgcatggcaaactgccactaatccttcagtctttgtgaagctgtcagaccccccagcacaggtctcagtcccgttcatgtcacctgcgagcgcctaccaatggttttatgacgggtatcccacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgcccaaacaacatgatgggtacgttctcagtgcggactgtaggaacctcgaagtccaagtacccattggtgatcaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgcaaccaaaattatctattcaaagccaacccaaattatgctggcaa----ctccatcaaaccaactggcgccagtcgtacagcaat---caccac---------------------------------------ccttggg------------------------------------------aaatttggacaacagtccggggccatctacgtgggcaacttcagagtggtcaaccgtcacctcgccactcataatgactgggcaaatcttgtttgggaggatagctcccgcgatttacttgtatcatctactactgcccaaggttgtgacacgattgctcgttgcaactgccagacaggagtgtattattgtaactcaatgagaaaacactatccggtcagtttctcgaaacccagcttgatctttgtagaggccagtgagtattacccggctagataccagtcgcacctcatgcttgcagtgggtcactcggaaccaggggattgcggtggtattctcagatgccaacacggcgtcgtaggaatagtctccaccgggggaaatggcatggtggggttcgccgatgtgagggaccttctgtggttggatgatgaagctatggagcagggcgtgtctgattacatcaaa-gggcttggagacgcttttggcatggggtttacagacgcggtgtcaagagaagttgaagcattgaagaaccacttggttggctcagagggtgctgtggagaaaattcttaagaacttagtcaaactcatttctgcgctcgtcattgtcatcaggagtgattatgacatggtcacattgacagcgacacttgccttaatcgggtgccacgggagtccctgggcctgggttaagtcgaaaacagcatcaattttgggcataccgatggctcagaagcagagtgcctcttggttgaagaagttcaacgatgcggcgagcgccgctaaggggcttgagtggatatctaacaaaatcagcaaatttatcgagtggctcaaggagaaaattgttccggctgctagagagaaagtcgagtttctaaacaatctaaagcaactcccc-ttgttggagaaccaaatttccaatctcgagcagtcagcagcttcgcaggagaaccttgaagcgatgtttggcaacgtgtcttatctggccca---------cttctgccgcaaattccaacccctctatgccacggaagcgaagagggtgtacgccctggagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtgtgcttaatcatcagaggctcacccggcactggaaagtccttggcaacagggattattgctagagctatagcagacaagtatcactccagtgtgtattccttacctccagaccctgaccactttgacgggtataaacaacagatcgtcactgttatggacgacctatgccaaaacccagacgggaaagacatgtcactattttgccagatggtctccacagtggatttcataccgcccatggcatctctggaagagaagggagtctcattcacctccaagtttgtgatcgcctccactaacgccagcaacatcatagtgccaacagtctcggattcagatgccattcgtcgtcggttctttatggactgcgatattgaggtaactgattcctataagacagaactgggcaggctcgatgcagggagagcagctaggttatgttctgagaacaacactgcaaactttaaacggtgcagtccattagtctgcgggaaagcaatccagcttagggataggaagtccaaggtgagatatagtttggacacagttgtaagtgagcttgtcagggagtataacaacagatccgttattgggaacaccattgaagctctcttccaggggctccctaaatttagaccgataaggatt---agcctagaggagaagcctgcacctgatgctattagtgatctattagctagtgttgatagtgaagaggttcgccaatactgt-agagaccagggatggattgtacctgactctcccaccaacgttgagcgccacttaaatagagctgtcttgattatgcaatctgtggccactgtggtagcagttgtgtcccttgtttacgttatctacaagttgttcgccggctttcaaggagcatattccggcgcccccaagcaaacactcaagaaaccagtactgcgcacggcaactgtgcaggggccgagtttggacttcgccctatctctacttaggagaaacattaggcaggtccaaaccgaccagggtcactttacaatgttaggagtgcgagaccacttggctgtgctccccaggcactcccaaccaggaaaaaccatctgggttgaacacaagttagtaaagatcgtagatgccgtggagctagtagatgaacaaggggttaacctggagctcacactggtaacgcttgacaccaacgaaaaatttagagacatcacaaaattcataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacatatgcccagtatgtttgtgccagttggagacgtggtccagtatggatttttgaatcttagtggtaagcccactcataggactatgatgtacaattttccaactaaggcaggacagtgtggtggcgttgtgactgctgtgggcaaggtgatcgggatccacattggtggcaacggtaggcaaggtttctgtgccgccctgaagaggggatacttttgcagtgaacaaggtgagatccaatggatgaaacccaacaaagagactggcaggttgaacatcaacgggcctactcgcactaaacttgaaccaagtgtcttccacgatgtgttcgagggcaccaaagagccagcagtgcttactagcaaagacccgagattggaagttgactttgagcaggctcttttctctaaatacgtgggaaacacacttcatgagcccgacgagtttgtcaaagaggcggccttacattatgccaatcaactcaagcagttagatattaagaccaccaagatgagtatggaggatgcttgttacggtacagagaacctggaagctatagatctccatacaagtgcgggatacccatacagtgcactaggcatcaagaaaagggatattttggacccaacaactcgtgatgtcagcaagatgaaattctacatggataagtatgggttggatttaccgtactctacttatgttaaagatgaacttagggcaatcgacaagatcaagaaaggaaagtctcgtctcatagaagcgagcagtctaaatgattcagtgtacttgagaatgacatttgggcacctttatgaagcttttcatgccaatccaggtacagtcactggttcagctgttggatgcaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcgttcgactactcaggatatgacgctagtcttagcccagtgtggttcagagcgctggagatagtcctgcgggaaattgggtactctgaggacgcagtgtctctcatagaagggatcaatcacacccaccatgtgtaccgcaacacaacttattgtgttcttgggggaatgccctcaggttgttcaggcacctccattttcaactcgatgatcaataacatcattatcaggacacttctgattaaaacattcaaagggatagatctggatgaattgaacatggtggcttacggggatgatgtgttggctagttaccccttcccaattgattgtctggaattggcgaaaacaggcaaggagtatggtttaaccatgactcctgccgataagtcgccctgctttaatgaagtcacatgggagaatgccaccttcttgaagagaggattcttgcccgatcatcaattcccatttctcattcaccccacgatgccaatgagggagattcacgagtctattcgttggactaaagacgcacgaggtacacaagatcatgtgcgctccctctgcttattagcgtggcacaatgggaaagaagagtatgaaaaatttgtgagtacaatcagatcagttccaattgggaaagcattggctataccgaattttgagaatttgagaaggaattggctcgaattgtttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagta----atctggt------c-g-----cgctaac-g-actg----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ647174.1_Human_enterovirus_71_isolate_EV123_07_complete_genome
------------------ttaaaa--cag--ct-gtgggttg-c-acccacccaca-gggcctac-t-gggcgctagcactctggcactgaggtacctttgtgcgcct-g-ttttatt------tccc--tt----ccc-c------ga-a-gtaacttagaag--------------ctgtgaactaac-gatcaa-tagtgggtgtgacgcaccagtcacatcttga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccaccatgaacgaggcagagtgtttcgttcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggaaaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaatcgtc-----taccta----tttgtt-ggttttgtaccat-----tatcact--------------gaaggctgtgatc-actctcaaattcattttgaccctcaactcaatcaaa-----catgggctcacaggtgtccacacaacgttccggctctcatgagaactccaactcagctactg-agggctccaccataaattacactaccattaattactataaagactcctatgccgccacagcaggtaaacagagcctcaagcaggacccagacaagttcgcaaatcctgtcaaggatatcttcactgaaatggcggcgccattaaaatccccatccgctgaggcatgcggttacagcgatcgggtagcacaactaactattggcaactctaccatcaccacacaagaagcagcaaacatcatagttggctacggtgagtggccttcctactgctcagattctgacgctacggcagtggacaaaccaacgcgcccagatgtttcggtgaataggttctacacattggacactaaactgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaacgcacagttccactacctttatcgatcagggttctgcattcatgtgcagtgcaacgctagtaagttccaccaaggagcactcctagtcgctgtcctcccagagtatgtcatcgggacaatagcaggtggcacagggacgg------aagatagccatcccccatacaagcagactcaacccggtgctgatggcttcgaattacaacacccgtacgtgcttgatgctggcatcccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccgtacataaacgcgctaccttttgattctgccttgaaccattgtaattttggcctgctggttgtgcctattagtccattagattatgaccaaggtgcgacgccggtgatccccattactattaccctggcccctatgtgctctgagtttgccggccttagacaagcagttacgcaagggtttcccactgagctaaaacctggtacaaaccaatttttaaccactgacgatggcgtctcagcacccatcctgcctaacttccaccccaccccgtgtatccatatacccggtgaagttagaaacttactagagctatgccaggtggagaccatcttagaagtcaacaa----------tgtgcccacaaatgccactagctta------atggagagactgcgcttcccggtctcagcccaggccg------gaaagggtgagctatgtgcagtattcagagctgaccccgggcggagtggaccatggcagtccaccttgttgggccaattatgtgggtactacacccaatggtcagggtcactggaagttaccttcatgtttactgggtcctttatggctaccggcaagatgctcatagcgtatacaccaccaggaggtcccttacccaaggatcgcgcgaccgctatgttgggtacgcacgtcatctgggactttgggctgcaatcgtctgtcacccttgtgataccatggatcagcaacactcactacagagcgcacgctcgagatggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaattacgtggtcccaattggagcacccaatacagcctatataatagcattggcggcagctcagaagaatttcaccatgaagttgtgtaaggatgctagtgatatcctacagacaggcactattcagggagatagg--------gtggcagatgtgattg---agagttccat--------------------------aggggacagtgtgagcagagccctcactcgagctctaccggca--------cccacaggccaaaacacgcaggtaagcagccatcgattggacactggtaaagttccagcgctccaagccgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgaaacgcgatgtgttcttaattcacatagcacagctgagaccactcttgatagctttttcagtagagcagggttagttggagagatagacctccctcttgaaggtacaac-caacccgaatgggtatgcaaactgggacatagacataacaggttacgcgcaaatgcgtagaaaggtggaattgttcacctacatgcgttttgacgcagagttcacctttgttgcatgcacgcctaccggggaagttgtcccgcaattgctccagtatatgtttgtaccacccggagcccccaagccagactccagggaatctctcgcatggcaaactgccactaatccttcagtctttgtgaagctgtcagaccccccagcacaggtctcagtcccgttcatgtcacctgcgagcgcttaccaatggttttatgacgggtatcccacatttggtgaacacaagcaggagaaagaccttgaatatggggcatgcccaaacaacatgatgggtacgttctcagtgcggactgtaggaacctcgaagtccaagtacccattggtgatcaggatttacatgaggatgaagcatgtcagggcgtggatacctcgcccaatgcgcaaccaaaattatctattcaaagccaacccaaattatgctggcaa----ctccatcaaaccaactggcgccagtcgtacagcaat---caccac---------------------------------------ccttggg------------------------------------------aaatttggacaacagtccggggccatctacgtgggcaacttcagagtggtcaaccgtcacctcgccactcataatgactgggcaaatcttgtttgggaggatagctcccgcgatttacttgtatcatctactactgcccaaggttgtgacacgattgctcgttgcaactgccagacaggagtgtattattgtaactcaatgagaaaacactatccggtcagtttctcgaaacccagcttgatctttgtagaggccagtgagtattacccggctagataccagtcgcacctcatgcttgcagtgggtcactcggaaccaggggattgcggtggtattctcagatgccaacacggcgtcgtaggaatagtctccaccgggggaaatggtatggtggggttcgccgatgtgagggaccttctgtggttggatgatgaagctatggagcagggcgtgtctgattacatcaaa-gggcttggagacgcttttggcatggggtttacagacgcggtgtcaagagaagttgaagcattgaagaaccacttggttggctcagagggtgctgtggagaaaattcttaagaacttagtcaaactcatttctgcgctcgtcattgtcatcaggagtgattatgacatggtcacattgacagcgacacttgccttaatcgggtgccacgggagtccctgggcctgggttaagtcgaaaacagcatcaattttgggcataccgatggctcagaagcagagtgcctcttggttgaagaagttcaacgatgcggcgagcgccgctaaggggcttgagtggatatctaacaaaatcagcaaatttatcgagtggctcaaggagaaaattgttccggctgctagagagaaagtcgagtttctaaacaatctaaagcaactcccc-ttgttggagaaccaaatttccaatctcgagcagtcagcagcttcgcaggagaaccttgaagcgatgtttggcaacgtgtcttatctggccca---------cttctgccgcaaattccaacccctctatgccacggaagcgaagagggtgtacgccctggagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtgtgcttaatcatcagaggctcacccggcactggaaagtccttggcaacagggattattgctagagctatagcagataagtatcactccagtgtgtattccttacctccagacccagaccactttgacgggtataaacaacagatcgtcactgttatggacgacttatgccaaaacccagacgggaaagacatgtcactattttgccagatggtctccacagtggatttcataccgcccatggcatctctggaagagaagggagtctcattcacctccaagtttgtgatcgcctccactaacgccagcaacatcatagtgccaacagtctcggattcagatgccattcgtcgtcggttctttatggactgcgatattgaggtaactgattcctataagacagaactgggcaggctcgatgcagggagagcagctaggttatgttctgagaacaacactgcaaactttaaacggtgcagtccattagtctgcgggaaagcaatccagcttagggataggaagtccaaggtgagatatagtttggacacagttgtgagtgagcttgtcagggagtataacaacagatccgttattgggaacaccattgaagctctcttccaggggctccctaaatttagaccgataaggatt---agcctagaggagaagcctgcacctgatgctattagtgatctattagctagtgttgatagtgaagaggttcgccaatactgt-agagaccagggatggattgtacctgactctcccaccaacgttgagcgccacttaaatagagctgtcttgattatgcaatctgtggccactgtggtagcagttgtgtcccttgtttacgttatctacaagttgttcgccggctttcaaggagcatattccggcgcccccaagcaaacactcaagaaaccagtgctgcgcacggcaactgtgcaggggccgagtttggacttcgccctatctctacttaggagaaacattaggcaggtccaaaccgaccagggtcactttacaatgttaggagtgcgagaccacttggctgtgctccccaggcactcccaaccaggaaaaaccatctgggttgaacacaagttagtaaagatcgtagatgccgtggagctagtagatgaacaaggggttaacctggagctcacactggtaacgcttgacaccaacgaaaaatttagagacatcacaaaattcataccagaaacaattagtcctgctagtgatgccactttagttataaatactgaacatatgcccagtatgtttgtgccagttggagacgtggtccagtatggatttttgaatcttagtggtaagcccactcataggactatgatgtacaattttccaactaaggcaggacagtgtggtggcgttgtgactgctgtgggcaaggtaatcgggatccacattggtggcaacggtaggcaaggtttctgtgccgccctgaagaggggatacttttgcagtgaacaaggtgagatccaatggatgaaacccaacaaagagactggcaggttgaacatcaacgggcctactcgcactaaacttgaaccaagtgtcttccacgatgtgttcgagggcaccaaagagccagcagtgcttactagcaaagacccgagattggaagttgactttgagcaggctcttttctctaaatacgtgggaaacacacttcatgagcccgacgagtttgtcaaagaggcggccttacattatgccaatcaactcaagcagttagatattaagaccaccaagatgagtatggaggatgcttgttacggtacagagaacctggaagctatagatctccatacaagtgcgggatacccatacagtgcactaggcatcaagaaaagggatattttggacccaacaactcgtgatgtcagcaagatgaaattctacatggacaagtatgggttggatctaccgtactctacttatgttaaagatgaacttagggcaatcgacaagatcaagaaaggaaagtctcgtctcatagaagcgagcagtctaaatgattcagtgtacttgagaatgacatttgggcacctttatgaagcttttcatgccaatccaggtacagtcactggctcagctgttggatgcaacccagatgtgttctggagtaagttaccaattctacttccaggatcgctttttgcgttcgactactcaggatatgacgctagtcttagcccagtgtggttcagagcgctggagatagtcctgcgggaaattgggtactctgaggacgcagtgtctctcatagaagggatcaatcacacccaccatgtgtaccgcaacacaacttattgtgttcttgggggaatgccctcaggttgttcaggcacctccattttcaactcgatgatcaataacatcattatcaggacacttctgattaaaacattcaaagggatagatctggatgaattgaacatggtggcttacggggatgatgtgttggctagttaccccttcccaattgattgtctggaattggcgaaaacaggcaaggagtatggtttaaccatgactcctgccgataagtcgccctgctttaatgaagtcacatgggagaatgccaccttcttgaagagaggattcttgcccgatcatcaattcccatttctcattcaccccacgatgccaatgagggagattcacgagtctattcgttggactaaagacgcacgaagtacacaagatcatgtgcgctccctctgcttattagcgtggcacaatgggaaagaagagtatgaaaaatttgtgagtacaatcagatcagttccagttgggaaagcattggctataccgaattttgagaatttgagaaggaattggctcgaattgtttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagca----atctggt------c-g-----cgctaac-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaa---------------------------------------------------------------------------------------------------------------------------------------
>AF119795.2_Enterovirus_71_strain_TW/2272/98_polyprotein_gene_complete_cds
------------------ttaaaa--cag--ct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcactctggtactgaggtacctttgtgcgcct-gtttttact------cccc--tt--ccccc-c------ga-a-gtaacttagaag--------------ctgtaaatca---gatcaa-tagcaggtgtggcacaccagtcataccttga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacgaggcagggtgtttcgctcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgtg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcacaaacca-gtggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcctatattggctgcttatggtgacaatcaaa-------aagttgttaccatatagctattggattggccatccgg--tgtgcaacagggcaattgtt-----taccta----tttatt-ggttttgtaccat-----tatcact--------------gaagtctgtgatc-actctcaaattcattttgaccctcaacacaatcaaa-----catgggctcacaggtgtccacacagcgctccggttcgcacgaaaactctaactcagctaccg-agggttccactataaactatactacaattaattactataaagattcctatgccgccacagcaggtaagcagagccttaagcaggacccagacaagtttgcaaatcctgtcaaagacatcttcactgaaatggcagcgccattaaaatctccatctgccgaggcatgtggttacagcgatcgggtggcacaattaactattggcaattctaccatcactacgcaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgttcggactctgatgctactgcagtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattggacacaaaattgtgggagaaat------------------catccaaggggtggtactggaaattcccggatgtgttaactgaaaccggggtctttggtcaaaatgcacagttccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagtaagttccaccaaggagcactcctagtcgctgtcctcccagagtatgtcattgggacagtggcaggtggcacagggacgg------aggatagccaccccccttataagcagactcaacccggtgctgatggcttcgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccgtacataaacgcactaccctttgattctgccttgaaccattgtaactttggtctgctggttgtgcctattagcccgttagattatgaccaaggtgcgacgccagtgatccccattactatcactttggccccaatgtgttctgaatttgcaggccttagacaagcagttacgcaagggtttcctactgagctgaaacctggcacaaaccaatttttaaccactgacgatggcgtctcagcacccattctgccaaactttcaccccaccccgtgtatccatatacccggtgaagttagaaacttgctagagctatgccaggtggagaccattttagaggtcaacaa----------tgtacctacgaatgccactagctta------atggagagactgcgcttcccggtctcagctcaagccg------ggaaaggtgagctatgtgcagtgttcagagctgaccctggacgaagtgggccatggcagtccaccttgttgggccagttgtgcgggtactacacccaatggtcaggatcactggaagtcaccttcatgttcaccgggtcctttatggctaccggcaagatgctcatagcatacacaccaccaggaggccccttacccaaggaccgggcgaccgccatgttgggcacggacgtcatctgggtttttggctgccaatcgtctgtcactcttgtaataccatggatcagcaacactcattacagagcgcacgctcgagatggtgtgtttgactactacactacaggtttggttagcatatggtaccagacgaattatgtggttccaattggagcacccaatacagcctatataatagcattggcggcagcccagaagaacttcaccatgaagttgtgtaaggatgctagtgatatcctacagacaggcactatccagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagcagagccctcacccgagctctaccggca--------cctaccggccaagacacacaggtgagcagtcatcgactggacaccggtgaagttccagcgcttcaagctgctgaaattggggcatcgtcaaacactagtgacgagagtatgattgaaacacgatgtgttcttaactcacatagcacagcagaaaccactttagacagcttcttcagtagagcaggcttggtaggggaaatagatctccctcttgagggcactac-caacccaaatggttatgctaactgggacatagacataactggctacgcacagatgcgcagaaaagtggaactattcacttatatgcgttttgatgcagaattcacttttgttgcgtgtaccccttctggtcaggttgttccacaattgctccagtatatgtttgttccccctggtgctcccaaaccggattccagggaatcactcgcttggcagactgctacgaacccctcagtttttgtcaagttgantgatcctccagcacaggtctccgttccgtttatgtcacctgcgagtgcttaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggagaaagatcttgagtatggagcatgccctaataacatgatgggtacgttctcagtgcggactgtaggcacctcgaagtccaagtacccattggtgatcaggatttacatgaggatgaagcacgtcagggngtgtcaancncccccnattncaaaccagaactatctattcaaagccaacccaaattatgctggtaa----ttctattaaaccaactggtgccagtcgcacagcaat---taccac---------------------------------------tctcggg------------------------------------------aaatttggacagcagtccggagctatctacgtgggcaactttagagtggttaaccgccatcttgctactcataatgactgggcaaaccttgtttgggaagacagctcccgcgacttgctcgtatcatctaccactgctcaaggttgtgacacgattgctcgttgcaattgccagacaggagtgtattattgtaactcaatgagaaaacactatccggtcagtttctcgaaacccagtttgatcttcgtggaggccagcgagtattatccagctagataccagtcacatctcatgcttgcagtgggtcattcggaaccaggggattgcggtggcattcttagatgccaacatggcgtcgtagggatagtttccaccgggggaaacggcctggtggggttcgccgatgtgagggatcttctgtggttggatgatgaagccatggagcagggcgtgtctgattacattaaa-gggcttggagatgcttttggcatggggtttacaggcgcagtgtcaagagaagttgaagcactgaaaagttacttgaccggctcagagggtgccgtggagaagattctaaagaacttagttaaactcatctctgcgctcgtcatcgtcatcaggagtgattatgacatggtcacattgacggcaacacttgccctgatcgggtgccacgggagcccttgggcctgggttaagtcgaagacagcatcaattttgggcataccgatggctcagaagcagagtgcctcttggttaaagaagttcaacgatgcggcgaatgccgcgaaggggcttgagtggatctccaacaaaatcagtaaatttatcgattggctcaaggagaaaatcgtaccggctgctaaagagaaagtcgagtttctaaacaatctaaagcaactcccc-ttattggagaaccaaatttctaatctcgaacagtcagcagcttcgcaggaggaccttgaggcgatgtttggcaatctttcttatctggccca---------cttctgccgcaaattccaacccctctatgccacggaagcaaagagggtgtacgccctagaaaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctaatcatcagaggctcgcctggtactgggaagtccttggcaacagggattattgctagagccatagcagacaagtaccactccagtgtgtattcacttacctcagacccagaccactttgacggataccaacaacagatcgtcactgctatggacgacctatgccagaatccagacggcaaagacatgtcattattttgtcaaatggtgtctacagtggatatcatgccacctatggcatctcttgaagagaagggagtctcattcgcctcaaagtttgtgattgcatcctctaccgccagtaccatcatagtgccaacagtctcggattcagatgccatccgtcgcaggttctatatggactgcgacattgaggggaccgattcctataagacagagctgggcagacttgatgcagggagagcagtcagactgtgctctgaagacagcactgcaaactttaaacggtgcagtccattagtctgtgggaaagcaatccagcttagggatagcaagtccaaggtgagatacagtgtgcacacggtagtgagtgaccttatcagggagtatatcaacagatcagttattgggaacaccattgaagctcttttccaaggaccccctaaatttagaccaataaggatt---agcttagaggagaagctcgctcctgatgctattagtgccttattagctagtgttgatagtgaagaggtccgccaatactgt-agagttcagggatggattgtagctgattctcccaccaacgttgagcgacacttcaacagagtggtgctagtcatgcaatccatcgctactgtggttgcagttgtctcactggtgtatgttatttataagctgttcgccgcgtttcaaggagcatattccggcgcccacaagcaaacactcaagaaaccagtgctgcgcacggcaactgtgcaggggccgagcttggacttcgctctatctctacttaggaggaacattagtcagggccaaaccgaccagtgccactttacaatgttaggagtcagagaccgcttgtctgtgctccgcagacactcccaaccaggaaagaccatctgggttgaacacaaattagtgaagatcgtagatgctgctgagttagtagacgaacaaggggttaacttagagctcacactggtaacgcttgatactaacgaaacatttagagcatccaccagattcataccagaaacaattagggctgctagtgatgcacctttaggtataaatactgaacatatgcccagtatggttgagncagttggagatgtcgctcagtatgggtttttggaccataggggtaaggccactcacaggactatgatgtacaatttcgctaccaaagctagtcagtgtggtggtgttgtcgctgccgtaggtaaagtgattggcatccacattggtggcaacggtaggcaaggtttctgtgctgccctgaagaggggatacttctgcagtgaacaaggtgagatccaatggatgaagtccatcaaagaaactggcaggttgaacatcagcggacctactcgcactaagcttgagccaagtgtctttcacgatgtgttcgaaggcactaaagagccagcagtgctgactagtaaagacccaaggctggaagttgattttgaacaggctcttttttcaaaatacgtggggaacacgcttcatgaacccgacgagtttgtcaaggagcggcctttacattantccaaccaactcaagcagttagatatcaagaccaccaagatgagcatggaggatgcatgttacggcacagagaacctggaagctatagatcttcacacaagtgcaggatatccatacagtgcactaggcatcaagaaaaaggacattttggatccaacaactcgcgatgtcagcaagatgaaattctacatggacaagtatgggttggatctaccgtactctacttatgttaaagatgaacttagggccatcgacaagatcaagaaagggaagtctcgtctcatagaagcgagcagtctaaatgactcaatgtacttgagaatgacatttgggcacctttatgaagctttccacgccaatccaggtacaatcactggttcagctgttgggtgcaacccagatgtgttctggagcaagttaccaattctacttccaggatcgcttttcgcgtttgactactcggggtatgacgctagtctcagcccagtgtggttcagggcgctggagatagtcctgcgggaaattggatactccgaagacgcagtgtgtctcatagaagggatcaatcacacccatcatgtgtaccgaattaaaacttattgtgttcttggggttatgccctcaggttgctcaggcacctccattttcaactcgttgttcaacaatttctttattagaacactcctgattaaaacattcaaagggatagatctagatgaactgaacatggtggcctacggggatgatgtgttggctagttaccccttcccaattgactgtctggagttggcaagaacaggcaaggagtatggtctaactatgacccctgccgacaagtcaccctgctttaatgaggttacgtgggagaatgccactttcttgaagagaggattcttgcctgattatcaattcccgtttctcatccaccctacgatgccaatgagggagattcacgaatccattcgttggaccaaagatgcacgaagtactcaagatcacgtgcgctccctctgcttattagcatggcacaacgggaaagaggagtatgaaaaatttgtgagtgcaatcagatcagttccaattggaaaagcattggctataccaaattatgagaatctgaggagaaattggctcgaattgtttt--aa-atccacagttg-------------------------tatg---------------ttgaaccc-cacccgta----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaa------------------------------------
>AB747375.1_Enterovirus_A71_genomic_RNA_complete_genome_strain:_02363-Thai-02
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgtcagcactccggtactgaggtacctttgtgcgcct-g-ttttact------tccc--tt---cccc-a------aa-a-gtaacttagaag--------------ctttgaaccagc-gatcaa-cagtaggtgtgacataccagtcacatctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-ttacgcggctgaaagagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccaccatgaacgaggcagagcgtttcgctcggca--cta-cccca---gtgtagatcaggctgatgagtcactgca-atccccatgggcgaccatggcagtggctgcgctggcggcctgcccat--------ggagaga-tccatgggacgctctaattttgacatggtgcg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcacacccacatacca-gtggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcatgttggctgcttatggtgacaatcgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtc-----taccag----tttatt-ggttttgtaccac-----tgacatt--------------aaagtctgtaatt-acccttaatattatcttgacccttaacacagtcaag-----catgggctcacaggtgtccacgcaacgctccggctcgcatgaaaattctaactcagccactg-agggctccaccataaactacactaccattaattactacaaagactcctatgccgctacagcaggcaaacagagtctcaaacaagatccggataagtttgcaaatcctgttaaagatattttcactgaaatggcagcaccactaaaatctccatctgctgaggcgtgtggatacagcgaccgagtagcacagctaactattggcaactctaccatcactacacaagaagcggcaaacattatagttggctatggtgagtggccttcctactgctctgactctgacgctacagcagtggataaaccaacgcgcccagatgtctcggtgaataggttctatacattggacaccaaattgtgggagaaat------------------cgtccaagggatggtactggaaattcccggatgtactaacagaaaccggggtttttggccagaatgcacaattccactacctctaccggtcagggttttgcattcacgtgcaatgcaacgcaagcaaattccatcaaggagcactcctagttgctgtcctcccggagtacgttattggaacagtggcgggtggcacagggacgg------aagatagtcaccccccttacaagcagactcaacccggtgccgacggtttcgagttacaacacccatatgtacttgatgctggcattccaatatcacaactaacagtgtgcccacatcagtggattaacttgaggaccaacaattgcgccactataatagtgccatacataaacgcactgccttttgattctgctttgaaccattgcaactttggtctgctggttgtgcctatcagtccgttggacttcgaccaaggagcgacgccagtgatccctattactatcacactggctccaatgtgttctgagttcgcaggtcttaggcaagcagtcacgcaagggttccctactgaattgaaacctggcacaaaccaatttctaaccactgacgatggtgtttcagcacccattctaccaaactttcaccccaccccatgtatccatatacctggtgaagtcaggaatttgctagagctgtgccaggtggagaccattttagaaatcaacaa----------tgtacccaccaatgccaccagtcta------atggagagactgcgctttccggtctcagcccaagcag------gaaagggcgagttgtgtgcagtgttcagagccgaccctgggcgaaatggaccgtggcagtctaccttgttgggccagttgtgcgggtactatactcaatggtcaggatcattggaagtcacatttatgttcactgggtcctttatggccactggtaagatgcttatagcctacacaccaccaggaggccctctgcccaaagaccgagcgactgccatgttgggtacgcatgttatttgggactttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacacccactacagagcacatgctcgagatggagtgttcgactattacactacaggcttggtcagtatatggtatcagacgaattatgtggttccaattggagcacccaacacagcctatataatagcactagcggcagcccagaaaaattttactatgaaattgtgtaaagatgccagtgatatcttgcagacaggcactattcagggagatagg--------gtggcggatgtgattg---agagttctat--------------------------aggggatagtgtgagcagagctctcacccaagctttaccagca--------cccacaggccaaaacacgcaagtaagcagccaccggttggacactggtaaagtcccagcactccaagccgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacggtgtgttcttaattcgcacagcacagctgagaccactctcgatagtttcttcagcagagcggggctagttggagagatagacctccctctcaaaggcacaac-caacccgaatggttatgctaactgggacatagatataacaggttatgcacaaatgcgtagaaaggtggagttgttcacctacatgcgttttgacgcagagttcacctttgttgcatgcacacccaccggggaggttgtcccacaattgctccaatacatgtttgtgccacctggggctcccaagccagactctagagaatccctcgcatggcaaactgccaccaatccctcggtttttgttaagttgtcagatcccccagcacaggtctcagttccattcatgtcacccgcgagcgcctatcaatggttctatgacggataccccacgttcggtgagcacaagcaggagaaagaccttgaatatggggcatgtccaaacaatatgatgggcacgttctcagtgcggactgtgggaacctcgaaatccaagtaccctttggtgattaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccaaaactatctattcaaagccaacccaaattatgccggcaa----ctccattaagccaaccggcaccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatccggggccatttacgtgggcaactttagagtggtcaaccgccaccttgccacacacaatgattgggcgaaccttgtttgggaggacagctctcgcgacttgctcgtgtcatccaccaccgcccagggttgtgacacaattgcccgctgtaattgccagacaggggtgtattattgcagttcaaggagaaagcactacccggtcagcttttcaaaacccagcttggtctacgtagaggccagtgagtattacccagctaggtatcagtcacacctcatgcttgcagtgggtcactcagaaccaggagattgcggtggcatactcagatgtcagcatggtgttgtagggatagtctccacaggaggaaacggcctggtggggtttgccgatgtgagggatcttctgtggctggatgatgaagctatggaacaaggtgtgtctgattacattaaa-gggcttggcgatgcttttggcatggggttcacagacgcagtatcaagagaggttgaagctttaaaacatcacttaatcggttcagaaggtgctgtggagaggattctcaagaacttagtaaaacttatctctgcactcgtcatcgttatcaggagcgactacgacatggtcacattgacggcaacactagctctgattgggtgtcatgggagcccttgggcctggatcaagtcgaaaacagcttcaattttgggtataccaatggcccagaagcagagcgcctcctggctaaagaaattcaacgacgcggcgagtgccgctaaagggcttgaatggatttccaacaagatcagcaaatttatcgattggctcaaggagaaaatcatcccagctgctaaagaaaaggtcgaatttctaaataacttaaagcaacttccc-ttattggagaaccagatctctaatcttgaacagtcggcagcttcacaggaggaccttgaagcattgtttggtaatgtgtcttatctggctca---------tttctgccgcaaattccaacccctctacgccacagaagcgaagagagtgtacgccctagaaaaaagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcattagaggctcacctggtactggtaagtccctagcaacaggaattatcgctagagctatagcagacaagtatcactctagtgtgtattctttacctccagatccagatcattttgatggatacaaacaacaggtcgttactgttatggacgacctctgccaaaacccggatgggaaagacatgtcactattttgccagatggtctccacagtggactttataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgattgcctccaccaacgctagcaacatcatagtaccaacagtttcggattcagatgccatccgtcgtcggttctttatggactgcgatattgaagtgaccgattcctataagacagatttgggtaggcttgatgcagggagggcagccaggttgtgctctgagaataacaccgcaaacttcaagcggtgcagtccattagtctgtgggaaggcaatacagcttagggataggaagtccaaggtgagatacagtgtggacacagtggtgagtgagctcatcagggagtacaacagcagatcagccattgggaataccattgaagctctttttcaggggccccccaaatttagaccgataaggatt---agtctggaggagaagcccgcacccgatgctatcagcgacctgttagctagtgttgatagtgaagaggttcgccaatactgc-agagaacaaggatggattgtgcctgacactcctaccaacgttgagcgccacttgagtagagctgttttgattatgcaatctgtagccaccgtggtagcagttgtgtccctcgtttacgtcatttataagttgtttgccggttttcagggagcatattccggcgcccccaagcaaactctcaagaaaccggtgctacgtacagcaactgtgcagggaccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaaccgatcagggccacttcacaatgctaggagtgcgagaccacttggctgtgcttcccagacactcccaaccaggaaagaccatctgggttgagcacaaactagtgaagatcgtagatgctgtggagttagtagatgaacagggggttaacctggaactcacactggtgacacttgacacaaatgaaaaattcagagacatcacgaagtttataccagaaacaattagtcctgctagtgatgccaccctagttataaatactgaacatatgcccagcatgttcgtgccagttggcgatgtggtccagtatggattcttaaatcttagtggcaagcccacccaccggactatgatgtacaatttcccaacaaaggcgggacagtgtggtggtgttgtgactgctgtgggcaaagtgattgggatccatattggtggtaatggtaggcaaggcttctgcgctgctctgaagagagggtacttttgcagtgagcaaggtgagatccagtggatgaagcccaacaaagaaactggtaggttgaacattaatgggcctactcgtaccaagcttgagccaagtgtctttcatgatgtgttcgagggcactaaagaaccagcagtgttaactagcaaagacccaaggttggaagttgattttgagcaggctttgttttcaaagtacgtgggaaacacgctccacgagcccgacgaatttgtcagggaggcggctttgcattatgccaaccaacttaagcagttagacatcaagaccaccaaaatgagcatagaggatgcttgttatggtacagagaacctggaagctatagatcttcacactagtgcaggatacccatacagtgcgctaggaatcaagaagagggatattttggacccaacaactcgtgatgtcagtaaaatgaaattttacatggataagtatgggttggatctcccatattctacttatgttaaagatgaactcagggccattgacaagatcaagaaagggaagtcccgtctcatagaagcgagtagtctaaatgactcagtgtacttgaggatgacatttgggcacctttatgaaaccttccacgccaatccaggtacagtcaccggttcagctgttggatgtaacccagatgtgttttggagtaagttaccaatcttactcccaggatcgctctttgcgttcgactactcagggtatgatgctagtctcagcccagtgtggttcagggcactagagatagtcctgcggggaattggatactctgaggaagcagtgtctctcatagaagggatcaaccacacccaccatgtgtaccgcaataaaacttattgtgtccttggaggaatgccctcaggctgctcaggtacctccattttcaactcgatgattaataatatcattattaggacacttttgatcaaaacattcaaagggatagacctcgatgagttgaacatggtagcctatggggacgacgtgttagctagttatcccttcccaattgactgtctagaattggcaaaaacaggtaaggagtatgggctgactatgacccctgctgacaaatcaccctgtttcaatgaagtcacgtgggagaatgccaccttcctaaagagaggattcttgcctgatcatcagttcccgttcctcattcaccccacgatgccaatgaaggagattcacgagtctattcgctggaccaaggacgcacgaaacacccaagaccacgtgcgctccctctgcttgctagcatggcacaatgggaaagaggagtatgaaaaatttgtaagcacaattagatcggttccaattgggaaagcattagctataccaaatttcgagaacctgagaagaaattggcttgaattgtttt--aa-atttacagttc-------------------------ataa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575937.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_1416
---------------------------------------------------------------------------------------------------------------------t------tccc--ct---cccc-a------aa-a-gtaacttagaag--------------ctttgaaccaac-gatcaa-cagtaggtgtgacatgccagtcacatctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcacgcggctgaaagagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccaccatgaacgaggcagagcgtttcgctcggca--cta-cccca---gtgtagatcaggctgatgagtcactgca-atccccatgggcgaccatggcagtggctgcgctggcggcctgcccat--------ggagaga-tccatgggacgctctaattttgacatggtgcg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcacacccacatacca-gtggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcatgttggctgcttatggtgacaattgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtc-----taccag----tttatt-ggttttgtaccac-----tgacatt--------------aaagtctgtaatt-acccttaattttatcttgacccttaacacagtcaag-----catgggctcacaggtgtccacgcaacgctccggctcgcatgaaaactctaactcagctactg-agggctccaccataaactacactaccattaattattacaaggactcctatgctgctacagcaggcaaacagagtctcaaacaagatccggataagtttgcaaatcctgtcaaagatatttttactgaaatggcagcaccactaaaatctccatctgctgaggcgtgtggatacagcgaccgagtagcacagctaactattggcaattctaccatcactacacaagaagcggcaaacataatagttggctatggtgagtggccttcctactgctctgattctgacgctacagcagtggataaaccaacgcgcccagatgtttcggtgaataggttctatacattggacaccaaattgtgggagaaat------------------cgtccaagggatggtactggaaattcccggatgtactaacagaaaccggggtttttggccagaatgcacaattccactacctctatcggtcagggttctgcattcacgtgcaatgcaacgcaagcaaattccatcaaggagcactcctagttgctgtcctcccggagtacgttattggaacagtggcgggtggcacagggacgg------aagatagccaccccccttacaagcagacacaacccggtgccgacggtttcgagttacaacacccatatgtgcttgatgctggcattccaatatcacaactaacagtgtgcccacaccagtggattaacttgaggaccaacaattgtgccaccataatagtgccatacataaacgcactgccctttgattctgctttgaaccattgcaactttggtctactggttgtgcctattagtccgttggacttcgaccaaggagcaacgccagtgatccctattactatcacactggctccaatgtgttctgagttcgcaggtcttaggcaagcagtcacgcaagggttccctactgaattgaaacctggcacaaaccaatttctaaccactgatgatggtgtttcagcacccattctaccaaactttcaccccaccccatgtatccatatacctggtgaagtcaggaatttgctagagctgtgccaggtggagaccattttagaaatcaacaa----------tgtacccacgaatgccaccagttta------atggagagactgcgctttccagtctcagcccaagcag------gtaagggcgagttgtgcgcagtgttcagagccgaccctggacgaaatggaccatggcagtctaccttgttgggccagttgtgcgggtactatactcaatggtcaggatcactggaagtcacatttatgttcactgggtcctttatggctactggtaagatgcttatagcctacacaccaccaggaggccctctgcccaaagaccgagcgaccgccatgctgggcacgcatgtcatttgggactttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacacccactacagagcacatgctcgagatggagtatttgactattacactacaggcttggtcagcatatggtatcagacgaattatgtggttccaattggagcacccaacacagcctatataatagcattagcggcagcccagaaaaattttactatgaaattgtgtaaggatgccagtgatattttgcagacaggcactattcagggagatagg--------gtggcggatgtgattg---agagttctat--------------------------aggggatagtgtgagcagagctctcacccaagctttaccagca--------cccacaggccaaaacacgcaagtaagcagccaccggttggacactggtaaagtcccagcactccaagctgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgaaacacggtgtgttcttaattcgcacagcacagctgagaccactctcgatagtttctttagcagagcggggctagttggagagatagacctccctctcgaaggcacaac-caacccgaatggttatgctaactgggacatagatataacaggttatgcacaaatgcgtagaaaggtggagttgttcacctacatgcgttttgacgcagagttcaccttcgttgcatgtacacccaccggggaggttgtcccacaattgctccaatacatgtttgtgccacctggggctcccaagccagactccagagaatcccttgcatggcaaactgccaccaatccctcggtttttgttaagttatcagatcccccagcacaggtctcagttccattcatgtcacccgcgagtgcttatcaatggttctatgacggatatcccacgttcggtgagcacaagcaggagaaagaccttgaatatggggcatgtccaaacaatatgatgggcacattctcagtgcggaccgtgggaacctcgaaatccaagtaccctttggtgattaggatttacatgaggatgaagcacgtcagggcgtgggtacctcgcccaatgcgtaaccaaaactatctattcaaagccaacccaaattatgccggcaa----ttccattaagccaaccggtaccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttgggcaacaatccggggccatttacgtgggtaactttagagtggtcaaccgccaccttgccacccacaatgattgggcgaaccttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccagggttgtgacacaattgcccgctgtaattgtcagacaggggtgtattattgcagttcaaggagaaagcactacccggtcagcttttcaaaacccagcttgatctacgtagaggccagtgagtattacccagctagatatcaatcacacctcatgcttgcagtgggtcactcagaaccaggagattgcggcggcatacttagatgtcagcatggtgttgtagggatagtctccacaggaggaaacggcctggtggggtttgccgatgtgagggatcttctatggttggatgatgaggctatggaacaaggtgtgtctgattacattaaa-gggcttggcgatgcttttggcatggggttcacagacgcagtatcaagagaggttgaagctttaaaacatcacttaatcggctcagaaggtgctgtggagaggattcttaagaacttagtaaaacttatctctgcactcgtcatcgttatcaggagcgactacgacatggtcacattgacggcaacactagctctgattgggtgtcacgggagcccttgggcctggatcaagtcgaaaacagcttcgattttgggtataccaatggcccagaagcagagcgcctcctggttaaagaaattcaacgatgcggcgagtgccgctaaagggcttgaatggatttccaacaagatcagtaaatttatcgattggctcaaggagaaaatcatcccggctgctaaagaaaaggtcgaatttctaaataacttaaagcaacttccc-ttattggagaaccagatctctaatcttgaacagtcggcagcttcacaggaggaccttgaggcactgtttggcaatgtgtcttatctggctca---------tttctgccgcaaattccaacccctctacgccacagaagcaaagagagtgtacgccctagaaaaaagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattagaggctcacctggtactggtaagtccctagcaacagggattatcgctagagctatagcagacaagtatcactctagtgtgtattctttacctccagatccagatcattttgatggatacaaacaacaggtcgttactgttatggacgacctctgccaaaacccggatgggaaagacatgtcactattttgccagatggtctccacagtggactttataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgattgcctccaccaacgctagtaacatcatagtaccaacagtttcggattcagatgccatccgtcgtcggttctttatggactgcgatattgaagtgaccgattcctataagacagatctgggtaggcttgatgcagggagagcagccaggttgtgctctgagaataacaccgcaaactttaaacggtgcagtccattagtctgtgggaaggcaatacagcttagggataggaagtccaaggtgagatacagtgtggacacagtggtgagtgaactcatcagggagtacaacagcagatcagccattgggaataccattgaagctcttttccaggggccccccaaatttagaccaataaggatt---agtctggaggagaagcccgcacccgatgctattagcgacctgctagctagtgttgatagtgaagaggttcgccaatactgc-agagaacaaggatggattgtacctgacactcctaccaacgttgagcgccacttgagtagagctgttttgattatgcaatccgtagccaccgtggtagcagttgtgtccctcgtttacgtcatttataagttgtttgccggttttcagggagcatattccggcgcccccaaacaaacacttaagaaaccggtgctacgtacagcaactgtacagggaccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaaccgatcagggccacttcacaatgctaggagtgcgagaccacttggctgtgcttcctagacactcccaaccaggaaagaccatctgggttgagcacaaactagtgaggatcgtagatgctgtggagttagtggatgaacagggggttaacctggaactcacactgataacacttgacactaatgaaaaattcagagatatcacgaagttcataccagaaacaattagtcctgctagtgatgccaccctagttataaatactgaacacatgcccagcatgttcgtgccagttggcgatgtggtccagtatggattcttaaatcttagtggcaagcccacccaccggactatgatgtacaatttcccaacaaaggcgggacagtgtggtggtgttgtgactgctgtaggcaaagtgattgggatccatattggtggtaatggtaggcaaggcttctgtgctgctctgaagagagggtacttttgcagtgagcaaggtgagatccagtggatgaagcctaacaaagaaactggtaggttgaacattaatgggcctactcgtaccaagcttgagccaagtgtctttcatgatgtgttcgagggcaccaaagaaccagcagtgttgactagcaaagatccaaggttggaagttgattttgagcaggctttgttttcaaagtacgtggggaacacgctccacgagcctgacgaatttgtcagagaggcggctttgcattatgccaaccaactcaaacagttagacatcaagactaccaaaatgagcatagaggatgcttgctatggtacagagaacctggaagctatagatcttcacactagtgcaggatacccatacagtgcgctaggaatcaagaagagggatattttggacccgacaactcgcgatgtcagtaaaatgaaattttacatggataagtatgggttggatctcccgtattctacttatgttaaagatgaactcagggccattgacaagatcaagaaagggaagtcccgtctcatagaagcgagcagtctaaatgattcagtgtacttgaggatgacatttgggcacctttatgaaatcttccacgccaatccaggtacagttaccggttcagctgttggatgtaacccagatgtgttttggagtaagttaccaatcttactcccaggatcgctctttgcgttcgactactcagggtatgatgctagtctcagcccagtgtggttcagggcgttagagatagtcctgcgggaaattggatactctgaggaagcagtgtctctcatagaagggatcaaccacacccaccatgtgtaccgcaataaaacttactgtgtccttggaggaatgccctcaggttgctcaggtacctccattttcaactcgatgattaataatatcattatcaggacacttttgatcaaaacattcaaggggatagatttagatgaattgaacatggtagcctatggggacgatgtgttagctagttatcccttcccaattgactgtctagaattggcaaaaacaggtaaggagtatgggctgactatgacccctgctgacaaatcaccctgctttaatgaagtcacgtgggagaatgccaccttcctaaagagaggattcttgcccgatcatcagttcccgttcctcattcaccctacgatgccaatgaaggagattcacgagtctattcgctggaccaaagacgcacgaaacacccaagaccacgtgcgctctctctgcttgctagcatggcacaatgggaaagaggagtatgaaaaatttgtaagcacaattagatcggttccaattgggaaagcattagctataccaaatttcgagaacctgagaagaaattggcttgaattgtttt--aa-atttacagttt-------------------------ataa---------------ctgaaccc-caccagaa----at-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB550340.1_Human_enterovirus_71_genomic_RNA_complete_genome_strain:_KED005-org
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgtcagcactctggtactgaggtacctttgtgcgcct-g-ttttact------tccc--tt---cccc-a------aa-a-gtaacttagaag--------------ctttgaaccaac-gatcaa-cagtaagtgtgacataccagtcacatctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-ttacgcggctgaaagagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccaccatgaacgaggcagagcgtttcgctcggca--cta-cccca---gtgtagatcaggctgatgagtcactgca-atccccatgggcgaccatggcagtggctgcgctggcggcctgcccat--------ggagaga-tccatgggacgctctaattttgacatggtgcg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcacacccacatacca-gtggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaatcgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtc-----taccag----tttatt-ggttttgcaccac-----tgacatt--------------aaagtctgtaatt-acccttaattttatcttgacccttaacacagtcaag-----catgggctcacaagtgtccacgcaacgctccggctcgcatgaaaactctaactcagctactg-agggttccaccataaactacactaccatcaattactacaaggactcctatgccgctacagcaggcaaacagagtctcaaacaagatccggataagtttgcaaatcctgtcaaagatattttcactgaaatggcagcaccactaaaatctccatctgctgaggcgtgtggatacagcgaccgagtagcacagctaactattggcaattctaccatcaccacacaagaagcggcaaacatcatagttggctatggtgagtggccttcctactgctctgattctgacgctacagcagtggataaaccaacgcgcccagatgtttcggtgaataggttctatacattggacaccaaattgtgggagaaat------------------cgtccaagggatggtattggaaattcccggatgtactaacagaaaccggtgtttttggccagaatgcacaattccattacctctatcggtcagggttttgcattcacgtgcaatgcaacgcaagcaaattccatcaaggggcactcctagttgctgtcctcccggagtacgttattggaacagtagccggtggcacagggacgg------aagatagtcaccccccttacaagcagactcaacccggtgccgacggtttcgagttacaacacccatatgtgcttgatgctggcattccaatatcacaactaacagtgtgcccacatcagtggattaacttgaggaccaacaattgtgccactataatagtgccatacataaacgcactgccctttgattctgctttgaaccattgcaactttggtctactggttgtgcctattagcccgttggacttcgaccaaggagcgacgccagtgatccctattaccatcacactggctccaatgtgttctgagttcgcaggtcttaggcaagcagtcacgcaagggttccctactgaactgaaacctggcacaaaccaatttctaaccactgacgatggtgtttcagcacccattctaccaaactttcaccccactccatgtatccatatacctggtgaagttaggaatttgctagagctgtgccaggtggagaccattttagaagtcaacaa----------tgtacccacgaatgccaccagctta------atggagagactgcgctttccggtctcagcccaagcag------gaaagggcgagttgtgtgcagtgttcagagccgaccctgggcgaaatggaccatggcagtctaccttgttgggccagttgtgcgggtactatactcaatggtcaggatcactggaagtcacattcatgttcactgggtcctttatggctactggtaagatgcttatagcctacacaccaccaggaggccctctgcccaaagaccgagcgaccgccatgttgggcacgcatgtcatttgggacttcgggctgcaatcgtctgttacccttgtaataccatggatcagcaacacccactacagagcacatgctcgagatggagtattcgactattacactacaggcttggtcagtatatggtatcagacgaattatgtggttccaattggggcacccaacacagcctatataatagcattagcggcagcccagaagaattttactatgaaattgtgtaaggatgccagtgatatcttgcagacaggcactattcagggagatagg--------gtggcggatgtgattg---agagttctat--------------------------aggggatagtgtgagcagagctctcacccaagctttaccagca--------cccacaggccaaaacacgcaagtaagcagccaccggttggacactggtaaagtcccagcactccaagccgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacggtgtgttcttaattcgcacagcacagctgagaccactctcgatagtttctttagcagagcggggctagttggagagatagacctccctctcgaaggcacaac-caacccgaatggttatgctaactgggacatagatataacaggttatgcacaaatgcgtagaaaggtggagttgttcacctacatgcgttttgacgcagagttcaccttcgttgcatgtacgcccaccgggsrggttgtcccacaattgctccaatacatgtttgtgccacctggggctcccaagccagactccagagaatccctcgcatggcaaactgccaccaatccctcggtttttgttaagttatcagatcccccagcacaggtctcagttccattcatgtcacctgcgagtgcctatcaatggttctatgacggatatcccacgttcggtgagcacaagcaggagaaagaccttgaatatggggcatgtccaaacaatatgatgggcacgttctcagtgcggaccgtgggaacctcgaaatccaagtaccctttggtgattaggatttacatgaggatgaagcacgtcagggcgtgggtacctcgcccaatgcgtaaccaaaactatctattcaaagccaacccaaattatgccggcaa----ctccattaagccaaccggtaccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatccggggccatttacgtgggtaactttagagtggtcaaccgccatcttgccacccacaatgattgggcgaacctcgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccagggttgtgacacaattgcccgctgtaattgccagacaggggtgtattattgcaactcaaggagaaagcactacccggtcagcttttcaaaacccagcttgatctacgtagaggccagtgagtattacccagctaggtatcagtcacacctcatgcttgcagtgggtcactcggaaccaggagattgcggcggcatacttagatgtcaacatggtgttgtagggatagtctccacaggaggaaacggcctggtggggtttgccgatgtgagggatcttctatggttggatgatgaagctatggaacagggtgtgactgattacattaaa-gggcttggcgatgcttttggcatgggattcacagacgcagtatcaagagaggttgaagctttaaaaaatcacttgatcggttcagaaggtgccgtggagaggattcttaagaacttagtaaaacttatctctgcactcgtcatcgttatcaggagtgactacgacatggtcacattgacggcaacactagctctgattgggtgccacgggagcccttgggcctggatcaagtcgaaaacagcttcaattttgggtataccaatggcccagaagcagagcgcctcctggttaaagaaattcaacgatgcggcgagtgccgctaaagggcttgagtggatttccaacaagatcagtaaatttatcgattggctcaaggagaaaatcatcccggctgctaaagaaaaggtcgaatttctaaataacttaaagcaacttccc-ttattggagaaccagatctctaatcttgaacagtcggcagcttcacaggaggaccttgaggcgttgtttggcaatgtgtcttatctggctca---------tttctgccgcaaattccaacccctctacgccacagaagcaaagagagtgtacgccctagaaaaaagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctgatcatcagaggctcacctggtactggtaagtctctagcaacaggaattatcgctagagctatagcagacaagtatcactctagtgtgtattctttacctccagatccagatcattttgatggatacaaacaacagatcgttactgttatggacgacctctgccaaaacccggatgggaaagacatgtcactattttgccagatggtctccacagtggactttataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgattgcctccaccaacgctagtaacatcatagtaccaacagtttcggattcagatgccatccgtcgtcggttctttatggactgcgatattgaagtgaccgattcctataagacagatttgggtaggcttgatgcagggagagcagccaggttgtgctctgagaataacaccgcaaacttcaaacggtgcagtccattagtctgtgggaaggctattcagcttagggataggaagtccaaggtgagatacagtgtggacacagtggtgagtgaactcatcagggagtacaacagcagatcagccattgggaataccattgaagctcttttccaggggccccctaaatttagaccgataaggatt---agtctggaggagaagcccgcacccgatgctatcagcgacctgctagctagtgttgatagtgaagaggttcgccaatactgc-agagaacaaggatggattgtgcctgacactcctaccaacgttgagcgccacttgagtagagctgttttgattatgcaatccgtagccactgtggtagcagttgtgtcccttgtttacgtcatctacaagttgtttgccggttttcagggagcatattccggcgcccccaagcaaacactcaagaaaccggtgctacgtacagcaactgtacagggaccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaaccgatcagggccacttcacaatgctaggagtgcgagaccacttggctgtgcttcccagacactcccaaccaggaaagaccatctgggttgagcacaaactagtgaagatcgtagatgctgtggagttagtagatgaacagggggttaacctggaactcacactggtaacacttgacaccaatgaaaaattcagagacatcacgaagtttataccagaaacaattagtcctgctagtgatgccaccctagttataaacactgaacatatgcccagcatgttcgtgccagttggcgatgtggtccagtatggattcttaaatcttagtggcaagcccacccaccggactatgatgtacaacttcccaacaaaggcgggacagtgtggtggtgttgtgaccgctgtaggcaaagtgattgggatccatattggtggtaatggtaggcaaggcttctgtgctgctctgaagagagggtacttttgcagtgagcaaggtgagatccagtggatgaagcccaacaaagaaactggtaggttgaacattaatgggcctactcgtaccaagcttgagccaagtgtctttcatgatgtgttcgagggcaccaaagaaccagcagtattgactagcaaagacccaaggttggaagttgattttgagcaggctttgttttcaaagtacgtagggaacacgctccacgagcccgacgaatttgtcagggaggcggctttgcattatgccaaccaactcaaacagttagacatcaagaccaccaaaatgagcatagaggatgcttgctatggtacagagaacctggaagctatagatcttcacactagtgcaggatacccatacagtgcgctaggaatcaagaaaagggatattttggacccaacaactcgcgatgtcagtaaaatgaaattttacatggacaagtatgggttggatctcccatattctacttatgttaaagatgaactcagggccattgacaagatcaagaaagggaagtcccgtctcatagaagcgagcagtctaaatgactcagtatacttgaggatgacatttgggcacctttatgaagccttccacgccaatccaggtacagtcaccggttcagctgttggatgtaacccagatgtgttttggagtaagttaccaatcttactcccaggatcgctctttgcgttcgactactcagggtatgatgctagtctcagcccagtgtggttcagggcgttagagatagtcctgcgggaaattggatactctgaggaagcagtgtctctcatagaagggatcaaccacacccaccatgtgtaccgcaataaaacttattgtgtccttggaggaatgccctcaggttgctcaggtacctccattttcaactcgatgatcaataatatcattatcaggacacttttgatcaaaacattcaaggggatagatctagatgaattgaacatggtagcctatggggacgatgtgttagctagttatcccttcccaattgactgtctagaattggcaaaaacaggtaaggagtatgggctgactatgacccctgctgacaaatcaccctgctttaatgaagtcacgtgggagaatgccaccttcctaaagagaggattcttgcctgatcatcagttcccgttcctcattcaccctacgatgccaatgaaggagattcacgagtctattcgctggaccaaagacgcacgaaacactcaagaccacgtgcgctccctctgcttgctagcatggcacaacgggaaagaggagtatgaaaaatttgtgagcacaattagatcggttccaattgggaaagcattagctataccaaatttcgagaatctgagaagaaattggctcgaattgtttt--aa-atttacagttc-------------------------ataa---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>DQ341358.1_Human_enterovirus_71_isolate_S40221-SAR-00_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgtcagcactctggtactgaggtacctttgtgcgcct-g-ttttact------tccc--tt---cccc-a------aa-a-gtaacttagaag--------------ctttgaaccaac-gatcaa-cagtaagtgtgacaaaccagtcacatctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-ttacgcggctgaaagagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccaccatgaacgaggcagagcgtttcgctcggca--cta-cccca---gtgtagatcaggctgatgagtcactgca-atccccatgggcgaccatggcggtggctgcgctggcggcctgcccat--------ggagaga-tccatgggacgctctaattttgacatggtgcg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcacacccacatacca-gtggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaatcgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtc-----taccag----tttatt-ggttttgtaccac-----tgacatt--------------aaagtctgtaatt-acccttaattttgtcttgacccttaacacagtcaag-----catgggctcacaggtgtccacgcaacgctccggctcgcatgaaaactctaactcagctactg-aaggttctaccataaactacactaccatcaattactacaaggactcctatgccgctacagcaggcaaacagagtctcaaacaagatccggataaatttgcaaatcccgtcaaggatattttcactgaaatggcagcaccactaaaatctccatctgctgaggcgtgtggatacagcgaccgagtagcacagctaactattggcaattctaccattaccacacaagaagcggcaaacattatagttggctatggtgagtggccttcctactgctctgattctgacgctacagcagtggataaaccaacgcgcccagatgtttcggtgaataggttctatacattggacaccaaattgtgggagaaat------------------cgtccaaggggtggtattggaaattcccggatgtactaacagaaaccggggtttttggccagaatgcacaattccactacctctatcggtcagggttttgcattcacgtgcaatgcaacgcaagtaaattccatcaaggggcactcctagttgctgtcctcccggagtacgttattggaacagtagcgggcggcacagggacgg------aagacagtcaccccccttacaagcagactcaacccggtgccgacggtttcgagttacaacacccatatgtgcttgatgctggcattccaatatcacaactaacagtgtgcccacatcagtggattaacttgaggaccaacaattgtgccactataatagtgccgtacataaacgcgctgccctttgattctgctttgaaccattgcaactttggtctactggttgtgcctattagcccgttggactttgaccaaggagcgacgccagtgatccctattactatcacactggctccaatgtgttctgagttcgcaggtcttaggcaagcagtcacgcaagggttccctactgaattgaaacctggcacaaaccaatttctaaccactgacgatggtgtttcagcacccattctaccaaactttcaccccactccatgtatccatatacctggtgaagtcaggaatttgctagaactgtgccaggtggagaccattttagaggtcaataa----------tgtacctacgaatgccaccagctta------atggagaggttgcgctttccggtctcagcccaagcag------gaaagggtgagttgtgtgcagtgtttagagccgaccctgggcggaatgggccatggcagtctaccttgttgggccagttgtgcgggtactatactcaatggtcaggatcactggaagtcacattcatgttcactgggtcctttatggctactggtaagatgcttatagcctacacaccaccaggaggccctctgcccaaagaccgagcgaccgccatgttgggcacgcatgtcatttgggactttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagagcacatgctcgagatggagtatttgactattacactacaggcttggtcagtatatggtatcagacgaattatgtggttccaattggggcacccaacacagcctatataatagcattagcggcagcccagaagaattttactatgaaattgtgtaaggatgccagtgatatcttgcagacaggcactattcagggtgatagg--------gtggcggatgtgattg---agagttctat--------------------------aggggatagtgtgagcagagctctcacccaagctttaccagca--------cccacaggccaaaacacgcaagtaagcagccaccggttggacactggtaaagtcccagcacttcaagccgctgaaattggagcatcgtcaaatgctagtgacgagagtatgattgagacacggtgtgttctcaattcgcacagcacagctgagaccactctcgatagtttctttagcagagcggggctagttggagagatagacctccctctcgaaggcacaac-caacccgaatggttatgctaactgggacatagatataacaggttatgcacaaatgcgcagaaaggtggagttgttcacttacatgcgtttcgatgcagagttcaccttcgttgcatgtacgcccaccggggaggttgtcccacaattgctccaatacatgtttgtgccacctggggctcccaagccagactccagagaatccctcgcatggcaaactgccaccaatccctcggtttttgttaagttatcagatcccccagcacaggtctcagttccattcatgtcacctgcgagtgcctatcaatggttctatgacggatatcccacgttcggtgagcacaagcaggagaaagaccttgaatatggggcatgtccaaacaatatgatgggcacgttctcagttcggaccgtgggaacttcgaaatccaagtaccctttggtgattaggatttacatgaggatgaagcacgtcagggcgtgggtacctcgcccaatgcgcaaccaaaactatctattcaaagccaacccaaattatgccggcaa----ctccattaagccaaccggtaccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatccggggccatttacgtaggtaactttagagtggtcaaccgccatcttgccacccacaatgattgggcgaacctcgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccagggttgtgacacaattgcccgctgcaattgccagacaggggtgtattattgcaactcaaggagaaagcactacccggtcagcttttcaaaaccaagcttgatctacgtagaggccagtgagtattacccagctaggtatcagtcacacctcatgcttgcagtgggtcactcagaaccaggagattgcggcggcatacttagatgtcagcatggtgttgtagggatagtttccacaggaggaaatggcctggtggggtttgccgatgtgagggatcttctatggttggatgatgaagctatggaacagggtgtgtctgattacattaaa-gggcttggcgatgcttttggcatgggattcacagacgcagtatcaagagaggttgaagctttaaaaaatcacttgatcggttcagaaggtgccgtggagaggattctcaagaacttagtaaaacttatctctgcactcgtcatcgttatcaggagtgactacgacatggtcacattgacggcaacactagctctgattgggtgccacgggagcccttgggcctggatcaagtcgaaaacagcttcaattctgggtataccaatggcccagaagcagagcgcctcctggttaaagaaattcaatgatgcagcgagtgccgctaaagggcttgagtggatttccaacaagatcagtaaatttatcgattggctcaaggagaaaatcatcccggctgccaaagaaaaggtcgaatttctaaataacttaaagcaacttccc-ttattggagaaccagatctctaatcttgaacagtcggcagcttcacaggaggaccttgaggcgttgtttggcaatgtgtcttatctggctca---------tttctgtcgcaaattccaacccctctacgccacagaagcaaagagagtgtacgccctagaaaaaagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcatcagaggctcacctggtactggtaagtctctagcaacaggaattatcgctagagctatagcagacaagtatcactctagtgtgtattctttacctccagatccagatcattttgatggatacaaacaacagatcgttactgttatggacgatctctgccaaaacccggatgggaaagacatgtcactgttttgccagatggtctccacagtggactttataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgattgcctccaccaacgctagtaacatcatagtaccaacagtttcagattcagatgccatccgtcgtcggttctttatggactgcgatatcgaagtgaccgattcctacaagacagatttgggtagacttgatgcagggagagcagccaggttgtgctctgagaataataccgcaaacttcaaacggtgcagtccattagtttgtgggaaggcaattcagcttagggataggaagtccaaggtgagatacagtgtggacacagtggtgagtgaactcatcagggagtacaacagcagatcagccattgggaataccattgaagctctattccaggggccccccaaatttagaccaataaggatt---agtctggaggagaagcccgcacccgatgctattagcgacctgctagctagtgttgatagtgaagaggttcgccaatactgc-agagaacagggatggattgtacctgacactcctaccaacgttgagcgccacttgagtagagctgtcttgattatgcaatccgtagccactgtggtagcagttgtgtcccttgtttacgtcatctacaagttgtttgccggttttcagggagcatattccggcgcccccaagcaaacactcaagaaaccggtgctacgtacagcaactgtacagggaccgagcttggacttcgccctatctctacttaggaggaacattaggcaggtccaaaccgatcagggccacttcacaatgctaggagtgcgagaccacttggctgtgcttcccagacactcccaaccaggaaagaccatctgggttgagcacaaactagtgaagatcgtagatgctgtggagttagtagatgaacaaggggttaacctggaactcacactggtaacacttgacaccaatgaaaaattcagagacatcacgaagtttataccagaaacaattagtcctgctagtgatgccaccctagttataaacactgaacatatgcccagcatgttcgtgccagttggcgatgtggtccagtatggattcttaaatcttagtggcaagcccactcaccggactatgatgtacaacttcccaacaaaggcgggacagtgcggtggtgttgtgaccgctgtaggcaaagtgattgggatccatattggtggtaatggtaggcaaggcttctgtgctgctctgaagagagggtacttttgcagtgagcaaggtgagatccagtggatgaagcccaacaaagaaactggtaggttgaacattaatgggcctactcgtaccaagcttgagccaagtgtcttttatgatgtgttcgagggcaccaaagaaccagcagtgttgactagcaaagacccaaggttggaagttgattttgagcaggctctgttttcaaagtacgtgggaaacacgctccacgagcccgacgaatttgtcagggaggcggctttgcattatgccaaccaactcaaacagttagatatcaagaccaccaaaatgagcatagaggatgcttgctatggtacagagaacctggaagctatagatcttcacactagtgcaggatacccatacagtgcgctaggaatcaagaaaagggatattttggacccaacaactcgcgatgtcagtaaaatgaaattctacatggataggtatggattggatctcccatattctacttatgttaaggatgaactcaggaccattgacaagatcaagaaagggaagtcccgtctcatagaagcgagcagtctaaatgactcagtatacttgaggatgacgtttgggcacctttatgaagccttccacgccaatccaggtacagtcaccggttcagctgttggatgtaacccagatgtgttttggagtaagttaccaatcttactcccaggatcgctctttgcgttcgactactcagggtatgatgctagtctcagcccagtgtggttcagggcgttagagatagtcctgcgggaaattggatactctgaggaagcagtgtctctcatagaagggatcaaccacacccaccatgtgtaccgcaataaaacttattgtgtccttggaggaatgccctcaggttgctcaggtacctccattttcaactcaatgatcaataatatcattatcaggacacttttgatcaagacattcaaggggatagatctagatgaattgaacatggtagcctatggggacgatgtgttagctagttatcccttcccaattgactgtctagaattggcaaaaacaggtaaggagtacgggctgactatgacccctgctgacaaatcaccctgctttaatgaggtcacgtgggagaatgccaccttcctaaagagaggattcttgcctgatcatcagttcccgttcctcattcaccctacgatgccaatgaaggagattcacgagtctattcgctggaccaaaggcgcacgaaacactcaagaccacgtgcgctccctctgcttgctagcatggcacaacgggaaagaggagtatgaaaaatttgtaagcacaattagatcggttccaattgggaaagtattagctataccaaatttcgagaatctgagaagaaattggctcgaattgtttt--aa-atttacagttc-------------------------ataa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>DQ452074.1_Human_enterovirus_71_strain_804/NO/03_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgtcagcactctggtactgaggtacctttgtgcgcct-gtttttact------tccc--tt---tccc-g------aa-a-gtaacttagaag--------------ctttgaaccagc-gatcaa-cagtaggtgtgacataccagtcacatctcga-tcaagcacttctg-tatccccggactgagtatcaataggctgc-ttacgcggctgaaagagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccaccatgaacgaggcagagcgtttcgctcggca--cta-cccca---gtgtagatcaggctgatgagtcactgca-atccccatgggcgaccatggcagtggctgcgctggcggcctgcccat--------ggagaga-tccatgggacgctctaattttgacacggtgcg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcacacccacatacca-gtggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcatgtcggctgcttatggtgacaatcgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtc-----taccag----tttatt-ggttttgtaccac-----tgacatt--------------aaagtctgtaatt-accctcaattttatcttgacccttaacacggtcaag-----catgggctcacaggtgtccacgcaacgctccggctcgcatgaaaattctaattcagccactg-agggctccaccataaattacactactattaattactacaaggactcctatgccgctacagcaggcaaacagagtctcaaacaagatccggataagtttgcaaatcctgttaaagatattttcactgaaatggcagcaccactaaaatctccatctgctgaggcgtgtggatacagcgaccgagtagcacagctaactattggcaattctaccatcactacacaagaagcggcgaacattatagttggctatggtgagtggccttcctactgctctgattccgacgctacagcagtggataaaccaacgcgcccagatgtttcggtgaataggttctatacattggacaccaaattgtgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtactaacagaaaccggggtctttggccagaatgcacaattccactacctctatcggtcagggttttgcattcacgtgcaatgcaacgcaagcaaattccatcaaggagcactcctagttgctatcctcccggagtacgttattggaacagtggcaggtggtacagggacgg------aagatagtcaccctccttacaagcagactcaacccggtgccgacggtttcgagttacaacacccatatgtacttgatgctggcattccaatatcacaactaacagtgtgcccacatcagtggatcaatttgaggaccaacaactgtgccactataatagtgccgtacataaatgcactgccttttgattctgctttgaaccattgcaactttggtctactggttgtacctattagtccgttggacttcgaccaaggagcgacgccagtgatccctattactatcacactggctccaatgtgttctgagttcgcaggccttaggcaagcagtcacgcaagggttccctactgaattgaaacctggcacaaaccaatttctaaccactgacgatggtgtttcagcacccattctaccaaactttcacccccacccgtgtattcatatacctggtgaagtcaggaatttgctagagctgtgccaggtggagaccattttagaagtcaacaa----------tgtacccacgaatgccaccagttta------atggagagactgcgctttccggtctcagcccaagcag------gaaagggcgagttgtgtgcagtctttagagccgaccctgggcgaaatggaccatggcaatctaccttgttgggccagttgtgcgggtactatacgcaatggtcaggatcactggaagtcacatttatgtttactgggtcctttatggctactggtaagatgcttatagcctacacaccaccaggaggccctctgcccaaagaccgagcgaccgccatgttgggcacacatgttatttgggactttgggctgcaatcgtctgtcacccttgtaataccatggatcagcaacactcactacagagcacatgctcgagatggagtattcgactattacactacaggcttggtcagtatatggtatcagacgaattatgtggttccaattggagcacccaacacagcctatataatagcattagcggcagcccaaaaaaattttactatgaaattgtgtaaagatgccagtgatatcttgcagacaggcactattcagggagatagg--------gtggcggatgtgattg---agagttctat--------------------------aggggatagtgtgagtagagctctcacccaagctctaccagca--------cccacaggccaaaacacgcaagtaagcagccaccggttggacactggtaaagtcccagcactccaagccgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacggtgtgttctcaactcgcacagcacagctgagaccactctcgatagtttctttagcagagcggggctagttggggagatagacctccctcttgaaggcacaac-caacccgaatggttatgctaactgggacatagatataacaggttatgcacaaatgcgtagaaaggtggagttgttcacctacatgcggtttgacgcagagttcacctttgttgcatgtacacccactggggaggttgtcccacaattgctccaatacatgtttgtgccacctggggctcccaagccagactccagagaatccctcgcatggcaaactgccaccaacccctcggtttttgttaagttgtcagatcccccagcacaggtctcagttccattcatgtcacccgcgagcgcctatcagtggttctatgacggataccccacgttcggtgagcacaagcaggagaaagaccttgaatatggggcatgtccaaacaatatgatgggcacattctcagtgcggactgtgggaacctcgaagtccaagtaccctttggtgattagaatttatatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccagaactatctattcaaagccaacccaaattatgccggcaa----ctccattaagccaaccggtaccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatccggggccatttacgtgggcaactttagagtggtcaatcgccaccttgccacccacaatgattgggcgaaccttgtttgggaggacagctctcgcgacttgctcgtgtcatccaccaccgcccagggttgtgacacaattgcccgctgtaattgtcagacaggggtgtattactgcagttcaaggagaaagcactacccggtcagcttttcaaaacccagcttagtctacatagaggccagtgagtattacccagctaggtatcagtcacacctcatgcttgcagtgggtcactcagaaccaggagactgcggtggcatactcagatgtcagcatggtgttgtagggatagtctccacaggaggaaacggcctggtggggtttgccgatgtgagggatcttctatggctggatgatgaagctatggaacaaggtgtgtctgattacattaaa-gggcttggcgatgcttttggcatgggtttcacagacgcagtatcaagagaggttgaagctttaaaacatcacttaatcggttcagaaggtgctgtggagaggattcttaagaacttagtaaaacttatctctgccctcgtcatcgttatcaggagcgactacgacatggtcacgttgacggcaacactagctctgattgggtgtcatgggagcccttgggcctggatcaagtcgaaaacggcttcaattttgggtataccaatggcccagaagcagagcgcctcctggttaaagaaattcaacgatgcggcgagtgccgctaaagggcttgaatggatttccaacaagatcagtaaatttatcgattggctcaaggagaaaatcatcccagctgctaaagaaaaggtcgaatttctaaataacttaaagcaacttccc-ttgttggagaaccagatctctaatcttgaacagtcggcagcttcacaggaggaccttgaagcattgtttggcaatgtgtcttatctggctca---------cttctgccgcaaattccaacccctctatgccacagaagcaaagagagtgtacgccctagaaaaaagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgattattaggggctcacctggtactggcaagtccctagcgacaggaattatcgctagagctatagcagacaagtatcactctagtgtgtattccttacctccagatccagatcattttgatggatacaaacaacaggtcgtcactgtcatggacgacctctgccaaaacccggatgggaaagacatgtcactattttgccagatggtctccacagtggactttataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgatcgcctctaccaacgctagtaacatcatagtaccaacagtttcagattcagatgccatccgtcgtcggttctttatggactgcgatattgaagtgaccgattcctataagacagatttgggtaggcttgatgcagggagggcagccaggctgtgttctgagaataacactgcaaacttcaaacggtgcagtccattagtctgtgggaaggcaatacagcttagggatagcaagtccaaggtgagatacagtgtggacacagtggtgagtgaactcattagggagtacaacagcagatcagccattgggaataccattgaagctctttttcaggggccccccaaatttagaccgataaggatt---agtctggaggagaagcccgcacccgatgctatcagcgacctgttagctagtgttgatagtgaagaggttcgccaatactgc-agagaacaaggatggattgtgcctgacactcctactaacgttgagcgccacttgagtagagctgttttgattatgcaatctgtagccaccgtggtagcagttgtgtccctcgtttacgtcatctataagttgtttgccggttttcagggagcatattccggcgcccccaagcaaactctcaagaaaccggtgttacgtacagcaactgtacagggaccgagcttggacttcgccctatctctactcaggaggaacattaggcaggtccagaccgatcagggccacttcacaatgctaggagtgcgagaccacttggctgtgcttcccaggcactcccaaccaggaaagaccatctgggttgagcacaaactagtgaggatcgtagatgctgtggagttagtagatgaacaaggggtcaacctggaactcacattggtaacacttgacactaatgaaaaattcagagacatcacgaggtttataccagaaacaattagccctgctagtgatgccaccctagttataaatactgaacatatgcccagcatgttcgtgccagttggcgatgtggtccagtatggattcttaaatcttagtggcaagcccacccaccggactatgatgtacaatttcccaacaaaggcgggacagtgtggtggtgttgtgactgctgtaggcaaagtgattgggatccatattggtggtaatggtaggcaaggcttctgcgctgctctgaagagagggtacttttgcagtgagcaaggtgagatccagtggatgaagcccaacaaagaaactggtaggttgaacattaatgggcctactcgtaccaagcttgagccaagtgtctttcatgatgtgttcgagggcaccaaagaaccagcagtgttgactagcaaagacccaaggttggaagttgattttgagcaggctttgttttcaaagtacgtgggaaacacgctccacgagcccgatgaatttgtcagggaggcggctttgcattatgccaaccaactcaagcagttagacatcaagaccaccaaaatgagcatagaggatgcttgctatggtacagagaacctggaagctatagatcttcacactagtgcaggatacccatacagtgcgctaggaatcaagaagagagatattttggacccaacaactcgtgatgtcagtaaaatgaaattttacatggataagtatggattggacctcccgtattccacttatgttaaagatgaactcagggccattgacaagatcaagaaagggaagtcccgtctcatagaagcgagtagtctaaatgactcagtgtacttgagaatgacatttgggcacctttatgaaaccttccacgccaatccaggtacagtcaccggttcagctgttggatgtaacccagatgtgttttggagcaagttaccaatcttactcccaggatcgctctttgcgttcgactactcagggtatgatgctagtctcagcccagtgtggttcagggcgttagagatagtcctgcgggaaattggatactctgaggaagcagtgtctctcatagaagggatcaaccacacccaccatgtgtaccgcaataaaacttattgtgtccttggaggaatgccctcaggttgctcaggcacctccatttttaactcgatgattaataatatcattatcaggacacttttgatcaaaacattcaaagggatagacctcgatgaattgaacatggtagcctatggggacgatgtgttagctagttatcccttcccaattgactgtctagaattggcaaaaacaggtaaggagtatgggctgactatgacccctgctgacaaatcaccctgctttaatgaagtcacgtgggagaatgccaccttcctaaagagaggattcttgcctgatcatcagttcccgttcctcattcaccccacgatgccaatgaaggagattcacgagtctattcgttggaccaaagacgcacgaaacacccaagaccacgtgcgctccctctgcttgctagcatggcacaatgggaaagaggaatatgaaaaatttgtaagcacaattagatcggttccaattgggaaagcattagctataccaaatttcgagaacctgagaaggaattggcttgaattgtttt--aa-atttacagttc-------------------------aata---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gggggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>DQ341360.1_Human_enterovirus_71_isolate_J115-MAL-01_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgtcagcactctggtactgaggtacctttgtgcgcct-g-ttttact------tccc--tt---cccc--------aa-a-gtaacttagaag--------------ctttgaaccaac-gatcaa-cagtgggtgtgacataccagtcacatctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-ttacgcggctgaaagagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccaccatgaacgaggcagagcgtttcgctcggca--cta-cccca---gtgtagatcaggctgatgagtcactgca-atccccatgggcgaccatggcagtggctgcgctggcggcctgcccat--------ggagaga-tccatgggacgctctaattttgacatggtgtg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcacacccacatacca-gtggg-cagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttatgttggctgcttatggtgacaatcgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtc-----taccag----tttatt-ggttttgtaccac-----tgacatt--------------aaagtctataatt-acccttaattttatcttgacccttaatacagtcaag-----catgggctcacaggtgtccacgcaacgctctggctcgcatgaaaactctaactcagctactg-agggctccaccataaactacactaccatcaattactacaaggactcctatgccgctacagcaggcaaacagagtctcaaacaagatccggataagtttgcaaaccctgtcaaagacattttcactgaaatggcagcaccactaaaatctccatctgctgaggcgtgtggatatagtgatcgggtagcacagctaactattggcaattctactatcaccacacaagaagcggcaaacattatagttggctatggtgagtggccttcctactgctctgattctgacgctacagcagtggataaaccaacgcgcccagatgtttcggtgaacaggttctatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtattggaaattcccggatgtactaacagaaaccggggtttttggccagaatgcacaattccactacctctatcggtcaggattttgcatccacgtgcaatgcaacgcaagtaaattccatcaaggggcacttctagttgctgttctcccggagtacgttattggaacagtggcgggtggtacagggacgg------aagatagtcaccccccgtacaagcagactcaacccggtgccgacggcttcgagttacaacacccatatgtgcttgatgctggcattccaatatcacaactaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccactataatagtgccatatataaacgcactgccctttgattctgctttgaaccattgcaactttggtctactggttgtgcctattagcccgttggacttcgaccaaggagcgacgccagtgatccctattactatcacactggctccaatgtgttctgagttcgcaggtcttaggcaagcagtcacgcaagggtttcctactgaactgaaacctggcacaaaccaatttttaaccactgacgatggtgtttcagcgcctattctaccaaactttcaccccactccatgtatccatatacctggtgaagtcaggaatttgctagagctgtgccaggtggagaccattttagaagtcaacaa----------tgtacccacgaatgccaccagttta------atggagagactgcgctttccggtctcagcccaagcag------gaaaaggcgagttgtgtgcagtgttcagagccgaccctgggcgaaatggaccatggcagtctaccttgttgggccagttgtgcgggtactatactcaatggtcaggatcactggaagtcacatttatgttcactgggtcctttatggccactggtaagatgcttatagcctacacaccaccaggaggccctctgcccaaagaccgagcgaccgccatgctgggcacgcatgttatttgggacttcgggctgcaatcgtctgttacccttgtgataccatggatcagtaacacccactacagagcacatgctcgagatggagtattcgactattacactacaggcttggtcagtatatggtatcagacgaattatgtggttccaattggggcacccaacacagcctatataatagcattagcggcagcccagaagaattttaccatgaaattgtgtaaggatgccagcgatatcttgcagacaggcactattcagggagatagg--------gtggcggatgtgattg---agagttctat--------------------------aggggatagtgtgagcagagctcttacccaagctttaccagca--------cccacaggccaaaacacgcaagtaagcagccaccggttggacaccggtaaagtcccggcactccaagctgctgaaattggggcatcatcaaatgctagtgacgagagtatgattgagacacggtgtgttcttaattcgcacagcacagctgagaccactctcgatagtttctttagcagagcggggctagttggagagatagacctccctctcgaaggcacaac-caacccgaatggttatgctaactgggacatagacataacaggctatgcacaaatgcgtagaaaggtggagctgttcacctacatgcgttttgacgcagagttcaccttcgttgcatgcacgcccaccggggaggttgtcccgcaattgctccaatacatgtttgtgccacctggggctcccaagccagactccagagaatccctcgcatggcaaactgccaccaatccctcggtttttgttaagttatcagatcccccagcacaggtctcagttccattcatgtcacctgcgagtgcctatcaatggttctatgacggatatcccacgttcggtgagcacaagcaggagaaagaccttgaatatggggcatgtccaaacaacatgatgggcacgttctcagtgcggaccgtgggaacctcgaagtccaagtaccctttggtgattaggatttacatgaggatgaagcacgtcagggcgtgggtacctcgcccaatgcgtaaccaaaactatctattcaaagccaacccaaattacgccggcaa----ttccattaagccaactggcaccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatccggggccatttacgtgggtagctttagagtggtcaaccgtcatcttgccacccacaatgattgggcgaacctcgtttgggaagacagctctcgcgatttgctcgtgtcatccaccaccgcccagggttgtgacacaattgcccgctgtaattgtcagacaggggtgtattattgcaactcaaagaggaagcactacccggtcagcttttcaaaacccagcttgatctacgtagaggccagtgagtattacccagctagatatcagtcacatctcatgcttgcagtgggtcactcagaaccaggagattgcggcggcatactcaggtgccagcatggtgttgtggggatagtctccacaggaggaaacggtctggtggggttcgccgatgtgagggatctcctatggttggatgatgaagctatggaacagggtgtgtctgattacattaaa-gggcttggcgatgcttttggcatggggttcacagacgcagtatcaagagaagttgaagctttaaaaaatcacttgatcggttcagaaggcgccgtggagaggattcttaagaacttagtaaaacttatctctgcactcgtcatcgttatcaggagcgactacgacatggtcacattgacggcaacactagctctgattgggtgccacgggagcccttgggcctggatcaagtcgaaaacagcttcaattttgggtataccaatggcccaaaagcagagcgcttcctggttaaagaaattcaacgatgcggcgaacgccgctaaagggcttgagtggatttccaacaagatcagtaaatttatcgattggctcaaggagaaaatcatcccggctgctaaagaaaaggtcgaatttttaaataacttaaagcaactcccc-ttattggagaaccagatctctaatcttgaacaatcggcagcttcacaggaggaccttgaagcattgtttggcaatgtgtcttatctggccca---------tttctgccgcaaattccaacccctctacgccacagaagcaaagagagtgtacaccctagaaaaaagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcatcagaggctcacctggtactggtaagtccctagcaacgggaattattgctagagctatagcagacaagtatcactctagtgtgtattctttacctccagatccagatcattttgatggatacaaacaacagatcgttactgttatggatgatctctgccaaaacccggatgggaaagacatgtcactattttgccagatggtctccacagtggactttataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgattgcctccaccaacgctagtaacatcatagtaccaacagtttcggattcagatgccatccgtcgccggttctttatggactgcgatattgaagtgaccgattcctataagacagatttgggtaggcttgatgcagggagagcagctaggttgtgctctgagaataacaccgcaaacttcaaacggtgtagtccattggtctgtgggaaggcaattcagcttagggataggaagtccaaggtgagatacagcgtggacacagtggtgagtgaactcatcagggagtacaacagcagatcagccattgggaataccattgaagctcttttccaggggccccccaaatttagaccgataaggatt---agtctagaggagaagcccgcacccgatgctatcagcgacctgctagctagtgttgatagtgaagaggttcgccaatactgc-agagaacaaggatggattgtgcctgacactcctaccaacgttgagcgccacttgagtagagctgttttgattatgcaatccgtagccactgtggtagcagttgtatcccttgtttacgtcatctacaagttgtttgccggttttcagggagcatattccggcgcccccaagcaaacactcaagaaaccggtgttacgtacagcaactgtacagggaccgagcttggacttcgccctatctctacttaggaggaacatcaggcaggtccaaaccgatcagggccacttcacaatgctaggagtgcgagaccacttggctgtgcttcccagacactcccaaccaggaaagaccatctgggttgagcacaaactagtgaggatcgtagatgccgtggagttagtagatgaacaaggggttaacctggaactcacactggtaacacttgacaccaatgaaaaattcagagacatcacgaagtttataccagaaacaattagccctgctagtgatgccaccctagttataaacactgaacatatgcccagcatgttcgtgccagttggcgatgtggtccagtatggattcctaaatcttagtggcaagcccacccaccggactatgatgtacaacttcccaacaaaggcgggacagtgtggtggtgttgtgaccactgtaggcaaagtgattgggatccatatcggtggtaatggtaggcaaggcttctgtgctgctctgaagagagggtacttttgcagtgagcaaggtgagatccagtggatgaaacccaacaaagaaactggtaggttgaacattaatgggcctactcgcaccaagcttgagccaagtgtctttcatgatgtgttcgagggtaccaaagaaccagcagtgttgactagcaaagacccaaggttggaagttgattttgagcaggctttgttttcaaagtacgtgggaaacacgctccacgagcccgacgagtttgtcaaggaggcggctttgcattatgccaaccaactcaaacagttggacatcaagaccaccaaaatgagcatagaggatgcttgctatggcacagagaacctggaggctatagatcttcacactagtgcaggatacccatacagtgcgctgggaatcaagaaaagggatattttggaccccacaactcgcgatgtcagtaaaatgaaattttacatggataagtatgggttggatctcccatattctacttatgttaaagatgaacttagggccattgacaagatcaagaaagggaaatcccgtctcatagaagcgagcagtctaaatgactcagtatacttgaggatgacatttgggcacctttatgaagtcttccatgccaatccaggtacagtcaccggttcagctgttggatgtaacccagatgtgttttggagtaagttaccaatcttactcccaggatcgctttttgcgttcgactactcagggtatgatgctagcctcagcccagtgtggttcagggcgttagagatagtcctgcgggaaattggatactctgaggaagcagtgtctctcatagaagggatcaaccacacccaccatgtgtaccgcaataaaacttattgtgtccttggaggaatgccctcaggttgctcaggtacctccattttcaactcgatgattaataatatcattatcaggacacttttgatcaaaacattcaaggggatagatctagatgaattgaacatggtagcctatggagacgatgtgttagctagttatcccttcccaattgactgtctagagttggcaaaaacaggtaaggagtatgggctgactatgacccctgctgacaaatcaccctgctttaatgaagtcacgtgggagaatgccaccttcctaaagagaggattcttgcctgatcatcagttcccgttcctcattcaccctacgatgccaatgaaggagattcacgagtctattcgctggaccaaagacgcacgaaacactcaagaccacgtgcgctccctctgcttgctagcatggcacaacgggaaagaggagtatgaaaaatttgtaagcacaattagatcgattccaattgggagagcattagctataccaaattttgagaatctgagaagaaattggcttgaattgtttt--ag-atttacagttc-------------------------ataa---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JF738000.1_Human_enterovirus_71_isolate_THA-EV71-002_complete_genome
---------------------------------------------------------------------------------------------------------------------t------tccc--tt---cccc-a------ga-a-ataacttagaag--------------ctttgagccaac-gatcaa-cagtgggtgcgacataccagtcgcatctcca-tcaagcacttctg-tttccccggactgagtatcaatacgctgc-ttacgcggctgaaggagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccatcatgaacgaggcagagcgtttcgctcggca--cta-cccca---gtgtagatcaggctgatgagtcactgca-atccccatgggcgaccatggcagtggctgcgctggcggcctgcccat--------ggagaga-tccatgggacgctctaattttgacatggtgcg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcacacccacatacca-gtggg-cagtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcgga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagcaattgtc-----taccag----tttatt-ggttttgtgccac-----tgacgtt--------------aaagtctgtaatt-acccttaatttcatcttgacccttaacacagtcaag-----catgggctcacaggtgtctacgcaacgctccggctcgcatgaaaactctaactcagccactg-agggctccaccataaactacactaccattaattactacaaggactcctatgctgctacagcaggcaaacagagtctcaaacaagatccggataagtttgcaaatcctgttaaagatattttcactgaaatggcagcaccactaaaatctccatctgccgaggcgtgtggatacagtgaccgagtagcacagctaactattggcaattctaccattactacacaagaagcagcaaacattatagttggctatggtgagtggccttcctactgctctgattctgatgctacagcggtggataaaccaacgcgcccagatgtttcggtgaataggttctatacattggacaccaaattgtgggagaaat------------------cgtccaaggggtggtactggaaattcccggatgtgctaacagagaccggggtttttggccagaatgcacaattccactacctctaccggtcagggttttgcattcacgtgcaatgcaacgcaagcaaattccatcagggagcactcctggttgctgtcctcccagagtacgttattgggacagtggcgggcggcacagggacgg------aagatagctaccctccttacaagcagactcaacctggtgccgacggcttcgagttacaacacccatacgtacttgatgctggcattccaatatcacaactaacagtgtgcccacatcagtggattaacttgaggactaacaattgtgccactataatagtgccatacataaacgcactgccttttgattctgctttgaaccattgcaactttggtttactggtcgtgcctattagcccgttggactttgaccaaggagcgacaccagtgatccctataactatcacactggctccaatgtgttctgaattcgcaggtcttaggcaagcagtcacgcaagggttccctactgaattgaaacctggcacaaaccaatttctaaccactgacgatggtgtttcagcacccattctaccaaactttcaccctaccccatgcatccatatacctggtgaagttaggaatttgctagagctgtgccaggtggagactattttagaagtcaacaa----------tgtgcccacgaatgccaccagttta------atggagagactgcgctttccggtctcagcccaagcag------gaaagggcgagttgtgtgcggtgttcagagccgaccctgggcgaaatggtccatggcagtctaccttgttgggccagttgtgtgggtattacactcaatggtcaggatcactggaagttacgttcatgttcactgggtcctttatggccactggcaagatgcttatagcctatacaccaccaggaggccctctgcccaaagatcgagcgaccgccatgttgggtacgcatgttatttgggactttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacacccactacagagcacatgctcgagatggagtattcgactactacactacaggcttagttagtatatggtatcagacgaattatgtggttccaattggagcacccaacacagcctatataatagcactagcggcagcccagaaaaattttactatgaaattgtgtaaggatgccagtgacatcttgcagacaggcactattcagggagatagg--------gtggcggatgtgatcg---agagttctat--------------------------aggggatagtgtaagcagagctctcacccaagctttaccagca--------cccacaggccaaaacacgcaagtgagcagccaccggttggacactggtaaagtcccagcactccaagccgcggaaattggagcatcatcaaatgccagtgacgagagtatgattgagacacggtgtgttctcaattcgcatagcacagctgagaccactctcgacagtttctttagcagagcggggctagttggggagatagacctccctctcgaaggcacaac-caacccgaatggttatgctaactgggacatagatataacaggttatgcacaaatgcgtagaaaagtggagttattcacctacatgcgttttgacgcagagttcacctttgttgcatgtacacccaccggggaggttgtcccacaattgctccaatacatgtttgtaccacctggggctcccaagccagattccagagagtccctcgcatggcaaactgccaccaatccctcggtctttgtcaagttgtcagatcccccagcacaggtctcagttccattcatgtcacccgcgagcgcctatcaatggttttatgacggatatcccacgtttggtgagcacaagcaagagaaagacctcgaatatggggcgtgtccgaacaacatgatgggcacgttctcagtacggaccgtggggacctcgaaatccaaataccctctggtgattaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgaaaccaaaattatttattcaaagccaacccaaattatgccggcaa----ctccattaagccaaccggtgccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaattcggacaacaatccggggccatctacgtgggcaactttagagtggtcaaccgccatctcgccacccacaatgattgggcgaaccttgtttgggaggacagctctcgcgacttgctcgtgtcatccactaccgcccagggttgtgacacaattgcccgctgtaattgccagacaggggtgtattattgcagctcaaggagaaagcactacccggtcagctttacaaaacccagtttggtctatgtagaggccagtgagtattacccagctaggtatcagtcgcacctcatgcttgcagtgggtcactcagaaccaggagattgcggtggcatactcagatgtcagcatggtgttgtgggaatagtctccacaggaggaaatggcctagtggggtttgccgatgtgagagaccttctatggctggatgatgaagctatggaacaaggtgtgtctgattacattaaa-ggacttggcgatgcttttggcatggggttcacagacgcagtatcaagagaggttgaagctttaagacaccacttaattggttcagaaggtgccgtggagaagattcttaagaacctagtaaaacttatctctgcactcgtcattgttatcaggagtgactacgacatggtcacattgacggctacgctagctctgattgggtgtcatgggagtccttgggcctggatcaagtcgaaaacagcttcaatcttgggtataccaatggcccagaagcagagcgcctcctggctaaagaaattcaatgacgcggcgagtgccgctaaagggcttgaatggatttccaacaagatcagtaaatttatcgattggctcaaggagaaaatcatcccagctgctaaagaaaaagtcgaattcctaaataacttaaagcaacttccc-ttattggagaaccagatctctaatcttgagcaatcggcagcttcacaggaggaccttgaagcattgtttggcaatgtgtcttatctggctca---------cttttgccgcaaattccaacccctctacgccacagaggcaaagagagtgtacgccctagaaaaaagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattagaggttcacctggtactggaaagtctctagcaacagggatcatcgctagagctatagcagacaagtatcactctagtgtgtattctttacctccagatcctgatcattttgatggatacaaacaacaggtcgttactgttatggacgacctctgccaaaacccggatgggaaagacatgtcattattttgccagatggtctccacagtggac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>EU414331.2_Human_enterovirus_71_strain_LR-CH-06_polyprotein_gene_complete_cds
------------------------------------------------------------------------------actctggtactgaggtacctttgtgcgcct-g-ttttact------tccc--tt---cccc-a------ga-a-ataacttagaag--------------ctttgaaccaac-gatcaa-cagtgggtgtgacataccagtcgcatctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-ttacgcggctgaaagagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccaccatgaacgaggcagagcgtttcgctcggca--cta-cccca---gtgtagatcaggctgatgagtcactgca-atccccatgggcgaccatggcagtggctgcgctggcggcctgcccat--------ggagaga-tccatgggacgctctaattttgacatggtgcg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcacacccacatacca-gtggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaaacgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtc-----taccag----tttatt-ggttttgtaccac-----tgacatt--------------aaagtctgtaatt-acccttaaattcatcttgacccttaacacagtcaag-----catgggctcacaggtgtccacgcaacgctccggctcgcatgaaaactctaactcagccactg-agggctccaccataaactacactaccattaattactacaaggactcctatgctgctacggcaggcaaacagagtctcaaacaagatccggataagtttgcaaatcctgttaaagatattttcactgaaatggcagcaccattaaaatctccatctgccgaggcgtgtggatacagtgaccgagtagcacagctaactattggcaattctaccattactacacaagaagcggcaaacattatagttggctatggtgagtggccttcctactgctctgattctgatgctacagcggtggataaaccaacgcgcccagatgtttcggtgaataggttctacacattggacaccaaattgtgggagaaat------------------cgtccaaggggtggtactggaaattcccggatgtactaacagagaccggggtttttggccagaatgcacaattccactacctctaccggtcagggttttgcattcacgtgcaatgcaacgcaagcaaattccatcagggagcactcctagttgctgtcctcccggagtacgttattggaacagtggcgggcggcacagggacag------aagatagccaccctccttacaagcagactcaacctggtgccgacggcttcgagttacaacatccatatgtactcgatgctggcattccaatatcacaactaacagtgtgtccacatcagtggattaacttgaggactaacaattgtgccactataatagtaccatacataaacgcactgccttttgattctgctttgaatcattgcaactttggtttactggttgtgcctattagtccgttggacttcgaccaaggagcgacaccagtgatccctataactatcacactggctccaatgtgttctgaattcgcaggtcttaggcaagcagtcacgcaagggttccccactgaattgaaacctggcacaaaccaatttctaaccactgacgatggtgtttcagcacccattctaccaaactttcaccccaccccatgcatccatatacctggtgaagtcaggaatttgctagagctgtgccaggtggagaccattttagaagtcaacaa----------tgtacccacgaatgccaccagttta------atggagaggctgcgctttccggtctcagcccaagcag------gaaagggcgagttgtgtgcagtgttcagagccgaccctgggcgaaatggtccatggcagtctaccttgttgggccagttgtgtgggtattacactcaatggtcaggatcactggaagttacgttcatgttcactgggtcctttatggctactggcaagatgcttatagcctatacaccgccaggaggccctctgcccaaagaccgagcgaccgccatgttgggtacgcatgttatttgggactttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacacccactacagagcacatgctcgagatggagtattcgactactacactacaggcttggttagtatatggtatcagacgaattatgtggttccaattggagcacccaacacagcctacataatagcattagcggcagcccagaaaaattttactatgaaattgtgtaaggatgccagtgatatcttgcagacaggcactattcagggagatagg--------gtggcggatgtgatcg---agagttctat--------------------------aggggatagtgtaagcagagctctcacccaagctttaccagca--------cccacaggccaaaacacgcaagtgagcagccaccggttggacactggtaaagtcccagcactccaagccgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacgcggtgtgttctcaattcgcacagcacagctgagaccactctcgacagtttctttagcagagcggggctagttggggagatagacctccctctcgaaggcacaac-caacccgaatggttatgctaactgggacatagatataacaggttatgcacaaatgcgtagaaaagtggagttattcacctacatgcgttttgacgcagagttcacctttgttgcatgtacacccaccggggaggttgtcccacaattgctccaatacatgtttgtgccacctggggctcccaagccagattccagagagtctctcgcatggcaaactgccactaatccctcggtctttgtcaagttgtcagatcccccagcacaggtctcagttccattcatgtcacccgcgagcgcctatcaatggttctatgacggataccccacgtttggtgagcacaagcaggagaaagacctcgaatatggggcgtgtccgaacaacatgatgggcacgttttcagtacggaccgtggggacctcgaaatctaagtaccctctggtgattaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccaaaattatctattcaaagccaacccaaattatgccggcaa----ctccattaagccaaccggtaccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaattcggacaacaatccggggccatctacgtgggcaactttagagtggtcaaccgccacctcgccacccacaatgattgggcgaaccttgtttgggaggacagctctcgcgacttgctcgtgtcatccactaccgcccagggttgtgacacaattgcccgctgtaattgccagacaggggtgtattattgcagctcaaggagaaagcactacccggtcagcttttcaaaacccagtttggtctatgtagaggccagtgagtattacccagctaggtatcagtcacacctcatgcttgcagtgggtcactcagaaccaggagattgcggtggcatactcagatgtcagcatggtgttgtgggaatagtctccacaggaggaaatggcctagtggggtttgccgatgtgagggaccttctatggctggatgatgaagctatggaacaaggtgtgtctgattacattaaa-gggcttggcgatgcttttggcatggggttcacagacgcagtatcaagagaggttgaagctttaaaacaccacttaattggttcagaaggtgttgtggagaagattcttaagaacctagtaaaacttatctctgcactcgtcattgttattaggagtgactacgacatggtcacattgacggctacgctagctctgattgggtgtcatgggagcccttgggcctggatcaagtcgaaaacagcttcaatcttgggtataccaatggcccagaagcagagcgcctcctggctaaagaaattcaacgacgcggcgagtgccgctaaagggcttgaatggatctccaacaagatcagtaaatttatcgattggctcaaggagaaaatcatcccagctgctaaagaaaaggtcgaattcctaaataacttaaagcaacttccc-ttattggagaaccagatctctaatcttgaacagtcggcagcttcacaggaggaccttgaagcattgtttggcaatgtgtcttatctggctca---------cttctgccgcaaattccaacccctctacgccacagaggcaaagagagtgtacgccctagaaaaaagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattagaggttcacctggtactggaaagtctctagcaacaggaatcatcgctagagctatagcagacaagtatcactctagtgtgtattctttacctccagatcctgatcattttgatggatacaaacaacaggtcgttaccgttatggacgacctctgccaaaacccggatgggaaagacatgtcattattttgccagatggtctctacagtggactttataccgcctatggcatctttggaggagaagggagtctcattcacctctaagtttgtgattgcctctactaacgctagtaacatcatagtaccaacagtttcggattcagatgccatccgtcgtcggttctttatggactgcgatattgaagtgaccgattcctataagacagatttgggtaggcttgatgcggggagggcagccagattgtgctctgagaacaacaccgcaaacttcaaacggtgcagtccactagtctgtgggaaggcaatacagcttagggataggaagtccaaggtgagatacagtgtggacacagtggtgagtgaactcatcagggagtacaacagcagatcagccattgggaataccattgaagctctttttcagggaccccccaagtttagaccgataaggatt---agtctggaggaaaaacccgcacccgatgccattagcgacctgttagctagtgttgatagtgaagaggttcgccaatactgc-agagagcaaggatggattgtgcctgatactcctaccaacgttgagcgccacttgagtagagctgttttgattatgcaatctgtagccaccgtggtagcagttgtgtccctcgtttatgtcatttataagttgtttgccggttttcagggagcatattccggcgcccccaagcaaactctcaagaaaccggtgctacgcacagcaactgtacagggaccgagcttggacttcgccctatctctactcaggaggaacattaggcaggtccaaaccgatcagggccacttcacaatgctaggagtgcgagatcacctggctgtgcttcccagacactcccaaccaggaaagaccatctggattgagcacaaactagtgaagatcgtagatgctgtggagttagtggatgaacagggggttaacctggaactcacactggtaacacttgacactaatgaaaaattcagagacatcacaaagtttataccagaaacaattagtcctgctagtgatgccaccttagttataaatactgaacatatgcccagcatgttcgtgccagttggcgatgtggtccagtatggattcttaaatcttagtggcaagcccacccaccggactatgatgtacaacttcccaacaaaggcgggacagtgtggtggtgttgtgactgctgtaggtaaagtgattggaatccatattggtggtaatggtaggcagggcttctgcgctgccctaaagagagggtacttttgcagtgagcaaggtgagatccaatggatgaagcccaacaaagaaactggtaggctgaacattaatgggcctactcgtaccaagcttgagccgagtgtctttcatggtgtgtttgagggcaccaaagaaccagcagtgttgactagcaaagacccaaggttggaggttgattttgaacaggctttgttttcaaagtacgtgggaaacacgctccacgagcccgacgaatttgtcagggaggcggctttacattatgccaaccaactcaagcaattagacatcaagaccaccaaaatgagcatagaggatgcttgctatggtacagagaacctggaagctatagatcttcacactagtgcagggtacccatacagtgcgctaggaatcaagaagagggacattttggacccaacaactcgtgatgtcagtaaaatgaaattttacatggataagtatgggttagacctcccatattctacttatgttaaagatgaactcagagccattgacaagatcaagaaagggaagtcccgtctcatagaagcgagtagtctaaatgactcagtgtacttgaggatgacatttgggcacctttatgaaacctttcacgccaatccaggtacagtcaccggttcagctgttggatgtaacccagatgtgttttggagtaagttaccaatcttactcccaggatcgctctttgcgttcgactactcggggtatgatgctagtctcagcccagtgtggttcagggcgttagagatagtcctgcgggaaattgggtactctgaggaagcagtgtctctcatagaggggatcaaccacacccaccatgtctaccgcaacaaaacttactgtgtccttggaggaatgccctcaggttgctcaggcacctccattttcaactcgatgattaataatattatcatcaggacacttttgatcaaaacattcaaagggatagatctcgatgaattgaacatggtggcctatggggacgatgtgttagctagttatcccttcccaattgactgcctagaattggcaaaaacaggtaaggagtatgggttgactatgacccctgctgacaagtcaccctgctttaatgaagtcacgtgggagaatgccactttcctaaagagaggatttttgcctgaccatcagttcccgttcctcatccaccccacgatgccaatgaaggagattcatgagtctatccgttggaccaaagacgcacgaaacacccaagaccacgtgcgctccctctgtttactagcatggcacaatgggaaagaggaatatgaaaaatttgtaagcacaattagatcggttccaattgggaaagcattagctataccaaatttcgagaacctgagaagaaattggctcgaattgtttt--ga-aattacagttc-------------------------ataa---------------ctgaacct-caccagaa----a--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ647172.1_Human_enterovirus_71_isolate_EV063_04_complete_genome
------------------ttaaaa--cag--ct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcactctggtactaaggtacctttgtgcgcct-gtttttacc------tccc--tt---cccc-c------ga-a-gtaacttagaag--------------ctttgaaccaac-gatcaa-cagtaggtgtgacataccagtcatatctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaagagaaaacgttcgttacccggccagctacttcgagaagct-tagtaccaccatgaacgaggcagagcgtttcgttcggca--caa-cccca---gtgtagatcaggctgatgagtcactgca-atccccatgggcgaccatggcagtggctgcgctggcggcctgcccat--------ggagaaa-tccatgggacgctctaattttgacatggtgcg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcacacccacaaacca-gtggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtc-----tacctg----tttact-ggttttgtaccac-----tgacact--------------aaagtctgtgatc-acccttaaatttatcttgaccctcaacacagtcaag-----catgggctcgcaggtgtccacgcaacgctccggctcgcatgaaaactctaactcggctactg-agggttccaccataaactacactaccatcaattactacaaggactcctatgccgccacagcaggcaaacagagtcttaagcaggatccagataagtttgcaaatcctgtcaaagatattttcactgaaatggcggcgccactaaaatctccatctgctgaggcatgtggatacagcgatcgagtagcacagctaactattggcaactctaccattactacacaagaagcagcgaacattatagttggttatggtgagtggccctcctactgctcggattctgacgccacagcagtggacaaaccaacgcgccctgatgtttcggtgaataggttttacacattggacaccaaattgtgggagaaat------------------cgtccaagggatggtattggaaattcccggatgtgctaacagaaaccggggtttttggccagaatgcacaattccactacctctatcggtcagggttctgcattcacgtgcaatgcaatgccagtaaattccatcaaggggcactcctagtcgctgtccttccggagtatgttattggaacagtggcgggtggcacaggaacgg------aagatagtcaccccccctacaagcagactcagcccggcgccgatggctttgagctacaacacccatacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggactaacaattgtgccacaataatagtgccatacataaacgcactgccctttgactctgccttgaaccattgcaattttggtctactggttgtgcctattagcccgttggacttcgaccaaggagcgacgccagtgatccctattactatcacattggccccaatgtgttctgagttcgcaggtcttaggcaagcagttacgcaagggtttcctactgagctgaaacctggcacaaaccaattcctaaccactgacgatggcgtctcagcgcctattctaccaaactttcaccccaccccatgtatccatatacctggtgaagtcaggaatttgctagagctgtgccaagtggagaccatcttagaagtcaacaa----------tgtgcccacgaatgccaccagctta------atggagagactgcgctttccggtctcagcccaagcag------gaaaaggcgaattgtgtgcagtgttcagggccgaccctgggcgaaatggaccatggcaatctaccctgttgggccagttgtgcgggtactacactcaatggtcaggatcactggaagtcacattcatgttcactgggtcttttatggccactggcaagatgcttatagcctacacaccgccgggaggccctttgcccaaggatcgagcaaccgccatgttgggtacgcatgtcatctgggatttcgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcactacagagcgcatgctcgagatggagtattcgactattacactacaggcttggttagtatatggtaccagacgaattatgtggttccaattggggcacccaacacagcctatataatagcattagcggcagcccagaagaattttaccatgaaattgtgtaaggatgccagtgatatcttacagacaggcaccattcagggagatagg--------gtggcggatgtgattg---agagttctat--------------------------aggggatagtgtgagcagagctctcacccaagctttaccggca--------cccacaggccagaatacgcaagtgagcagccaccggttggatactggcaaagtcccagcactccaagccgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacggtgtgtacttaattcgcacagcacagctgagaccactctcgacagtttcttcagcagagcggggttagttggggagatagacctccctcttgaaggcacaac-caacccgaatggttatgctaattgggacatagatataacaggttatgcgcaaatgcgtagaaaggtggagttgttcacctacatgcgttttgacgcagagttcacctttgtcgcgtgtacgcccaccggggaggttgtcccacaattgctccaatatatgtttgtgccacctggggcccccaagccagactccagagaatccctcgcatggcaaactgctaccaatccctcggttttcgttaagttatcagatcccccagcacaggtttcagttccgttcatgtcacctgcgagtgcttatcaatggttctacgacggatatcccacgttcggtgaacacaaacaggagaaagaccttgaatatggggcatgcccaaacaacatgatgggcacgttctcagtgcggaccgtggggacctcgaagtccaagtaccctttggtgattaggatttacatgaggatgaagcacgtcagagcatggatacctcgcccaatgcgtaaccaaaactatctgttcaaagccaacccaaactatgccggcaa----ctctattaagccaaccggcgctagtcgcacagcgat---cactac---------------------------------------tctcggg------------------------------------------aaatttgggcaacaatccggggccatttacgtgggcaactttagagtggttaaccgccatcttgccactcaaaatgattgggcgaaccttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccaccgcccaaggttgcgacacgattgcccgatgcaattgccagacaggggtgtattattgcaactcaaggagaaagcactacccggtcagcttctcaaaacccagcttgatctttgtagaggccagtgagtattacccggccaggtatcagtcacacctcatgcttgcagtgggtcactcagaaccaggagattgcggcggcatacttagatgtcaacacggtgtcgtagggatagtctccaccggggggaacggcctggtggggttcgccgatgtgagggatcttctatggttggatgatgaagctatggaacagggtgtgtctgattacattaaa-gggcttggtgatgctttcggcatgggattcacagacgcagtgtcaagagaggttgaagctttgaaaaatcacttgatcggctcagaaggtgccgtggagaaaattcttaaaaacttagtaaaactcatctctgcgctcgtcattgtcatcaggagtgactatgacatgatcacattgacggcaacacttgccctgattgggtgccacgggagcccttgggcctggattaagtcgaaaacagcttcaattttgggcataccaatggcccagaagcagagcgcctcttggttaaagaaatttaacgatgcggcgagcgccgccaagggacttgagtggatttccagcaagatcagtaaatttatcgattggctcaaggagaaaatcatcccggctgctagagaaaaagtcgaatttctaaataatttaaagcaacttccc-ttattggagaaccaaatctctaaccttgaacagtcagcagcttcgcaggaggaccttgaagcgatgtttggcaatgtgtcttatttggccca---------tttctgccgcaaatttcaacccctctatgccacagaagcaaagagagtgtacgccctagaaaaaagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcatcagaggctcacctggtactggtaaatctttagcaacaggaattatcgctagggctatagcagacaagtatcactctagtgtgtattccttacctccagatccagatcattttgatggatacaaacaacagattgttactgttatggacgacctctgccaaaacccggatgggaaagacatgtcactattttgtcagatggtctccacagtggactttataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgattgcctcgtcaagggcgagtaacatcatagtaccaacagtttcggattcggatgccatccgtcgtcggttctttatggactgcgatattgaagtgaccgattcctataagacagatttgggtaggcttgacgcagggagagcggccaggctgtgctctgagaacaacactgcaaacttcaaacggtgcagcccattggtttgcgggaaggcaatccagcttagggaaaggaagtccaaggtgagatacagtgtggacacagtggtgagtgagctcatcagggagtacaacagcagatcagctattgggaataccattgaagctcttttccaggggccccctaaatttagaccgataaagatt---agtctagaggagaaacccgcacctgatgcaattagtgacctgttggctagtgttgacagtgaagaagttcgccaatactgt-agagaacaaggatggattgtgcctgatactcctaccaacgttgagcgccacttgaatagagctgttttgattatgcagtccgtagccaccgtggtagcagtcgtgtctcttgtttacgtcatctacaaattgtttgccggttttcagggagcatattctggtgcccccaagcaaacactcaagaaaccggtgctacgtatagcaactgtacagggaccgagcttggacttcgccctatctctactcagaaggaacattaggcaggtccaaaccgatcagggccacttcacaatgctaggagtgcgagaccacttggccgtgctccccagacactcccaaccaggaaagaccatctgggttgagcacaagttagtgaaagttgtagatgctgtggagttagtagatgaacaaggagttaacctggaactcacactggtaacgcttgacaccaatgaaaaattcagagacatcacgaagtttataccagagacaattagtcctgctagtgatgccaccttagttataaacactgaacatatgcccagcatgtttgtgccagttggagatgtggtccagtacggattcttaaatcttagtggcaagcccacccaccggactatgatgtacaacttcccaacaaaggcgggacagtgtggtggtgttgtgaccgctgtaggcaaagtgattgggatccacattggtggtaatggtagacagggcttctgtgctgctctgaagagagggtacttttgcagtgaacagggtgagatccagtggatgaagcccaacaaagaaactggtaggttgaacattaatgggcctactcgcaccaagcttgagccaagtgttttccatgatgtgttcgagggcactaaagagccagcagtgctgactagcaaagaccctaggctggaagtcgattttgagcaagctttgttttcaaaatacgtgggaaacacgcttcatgagcccgatgagtttgtcagggaagcggctttgcattatgccaaccaactcaaacagttagacatcaagaccaccaaaatgagcatggaggatgcttgttacggcacagagaacctagaagctatagatcttcacactagtgcaggatacccatacagtgcactaggaatcaagaaaagggatattttggatccaataactcgcgatgtcagtaaaatgaaattctacatggataagtatgggttggatctcccgtattctacttatgttaaagatgaactcagggccattgacaagatcaagaaagggaagtcccgtctcatagaagcgagcagtctaaatgactcagtgtacttgaggatgacatttgggcacctttatgaaaccttccacgccaatccaggtacagtcaccggttcagctgttggatgcaacccagatgtgttttggagtaagttaccaatcctactccctggatcgctctttgcgttcgactactcagggtatgatgctagtctcagcccagtgtggttcagggcgttggagatagttctgcgggaaattgggtactctgaggacgcagtgtctctcatagaagggatcaatcacacccaccatgtgtaccgcaataaaacttattgtgttcttggaggaatgccctcaggttgctcaggtacctccattttcaactcgatgatcaataatattattatcaggacactcttgatcaaaacatttaaagggatagatctagatgaattgaacatggtagcctatggggatgatgtgttagctagctatcccttcccgattgactgtctagaattggcaaaaacaggtaaggagtatggtttgactatgacccctgctgacaaatcaccctactttaatgaagttacgtgggagaatgccacttttctaaagagaggattcttgcctgatcatcagttcccgttccttattcaccctacgatgccaatgaaggagattcacgagtccattcgttggaccaaagacgcacgaaacactcaggatcacgtgcgctccctctgcttgttagcatggcacaatgggaaagaggagtatgaaagatttgtgagcacaatcagatcggtcccaattggaaaagcgttggctataccaaattttgagaacctgagaagaaattggctcgaattgtttt--ga-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaa---------------------------------------------------------------------------------------------------------------------------------------
>AB575935.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_480
-----------------------------------------------------------------------------------ggtactgaggtacctttgtgcgcct-g-ttttacc------tccc--tt---cccc-c------ga-a-gtaacttagaag--------------ctgtgaaccaac-gatcaa-tagtaggtgtgacataccagtcatatctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaagagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccaccatgaacgaggcagagcgtttcgctcggca--caa-tccca---gtgtagatcaggctgatgagtcactgca-atccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattttgacatggtgcg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacacccacaagcca-gtggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaatcaaa-------gagttgttaccatatagctattggattggccgtccgg--tgtgcaacagagcaattgtt-----tactta----tttatt-ggttttgtaccat-----tgacact--------------gaagtctgtagtc-acccttaattttatcttgaccctcaatacagttaaa-----catgggctcacaagtgtccacacaacgctccggctcgcatgaaaactctaactcagctactg-agggctccactataaactacactactattaattattacaaggactcctatgccgctacagcaggcaaacagagtcttaagcaggatccagacaagtttgcaaatcctgtcaaagatattttcactgaaatggcagcgccactaaaatctccatctgctgaggcatgtggatacagcgatcgagtcgcacagttaactattggcaactccaccatcactacacaggaagcggcaaacattatagttggctatggtgagtggccctcttactgctcggattctgacgctacagcagtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtattggaaattcccggatgtgctaacagaaaccggggtttttggccaaaacgcacaattccactacctctatcggtcagggttctgcattcacgtgcaatgcaatgctagtaagttccatcaaggggcactcctagtcgctgtcctcccggaatatgtcattgggacagtggcaggtggtacaggaacgg------aggatagtcaccccccctacatgcagactcaacccggcgccgatggttttgagttacaacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccatacataaacgcactgccatttgattctgccctgaaccattgcaattttggcctactggttgtgcctattagcccgttagacttcgaccaaggagcgacgccagtgatccctattactatcacattggccccaatgtgttctgagtttgcaggtcttaggcaagcagtcacgcaagggtttcctactgagttgaaacctggcacaaaccaatttttaaccactgatgatggtgtttcggcgcccattctaccaaactttcaccccaccccatgtatccatatacctggtgaagttagaaatttgctagagctatgccaggtggagaccattttagaagtcaacaa----------tgtacccacgaatgccactagctta------atggagaggctgcgctttccggtctcagcccaagcag------gaaaaggcgagttgtgtgcagtgttcagagccgaccctgggcgaaatggaccatggcaatctaccttgttgggccagttgtgcgggtactacactcaatggtcaggatcactggaagtcaccttcatgttcactgggtcctttatggccactggcaagatgcttatagcctacacaccgccaggaggccctttgcccaaggatcgagcaaccgccatgttgggcacgcatgtcatctgggatttcgggctgcaatcgtctgttaccctcgtaataccatggatcagcaacactcactatagagcgcatgctcgagatggagtgttcgactattacactacaggcttggttagtatatggtatcagacgaattatgtggttccaattggggcacctaatacagcctatataatagcattagcggcagcccagaagaattttactatgaaattgtgtaaggatgccagtgatatcctacagacaggcactattcaaggagatagg--------gtggcggatgtgattg---agagttctat--------------------------aggggatagtgtgagcagagctctcacccaagctctaccggca--------cccacaggccagaacacgcaggtaagcagccaccgattggatactggtaaagttccagcactccaagccgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacacggtgtgttcttaattcgcacagcacagctgagaccactctcgatagtttcttcagcagagcggggttagttggggagatagacctccctctcgaaggcacaac-taacccgaatggttatgcaaactgggacatagatataacaggttatgcgcaaatgcgtagaaaggtggagctgttcacctacatgcgttttgacgcagagttcaccttcgtcgcgtgcacgcccactggggaggttgtcccacaattgctccaatatatgtttgtaccgcctggggcccccaagccagactccagagaatccctcgcatggcaaactgccaccaatccctcggtctttgttaagttatcagatcccccagcacaggtttcagttccattcatgtcacctgcgagtgcttatcaatggttctatgacggatatcccacattcggtgagcacaagcaggagaaagaccttgaatacggggcatgtccaaacaacatgatgggcacattctcagtgcggactgtagggacctcgaagtccaagtaccctttggtgattaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccaaaattatctatttaaagctaacccaaattacgccggtaa----ctctattaaaccaaccggtgccagtcgcacagcgat---caccac---------------------------------------tctcggg------------------------------------------aaatttggacaacaatccggggccatttacgtgggtaactttagagtggttaaccgccatcttgccactcaaaatgattgggcgaaccttgtttgggaagacagctctcgcgacttgctcgtgtcatctaccaccgcccaaggttgcgacacgattgcccgttgcaattgccagacaggggtgtactattgtaactcaaggagaaagcactacccggtcagtttctcaaaacccagcttgatctttgtagaggccagcgagtattacccagccaggtatcagtcacacctcatgcttgcagtgggtcactcagaaccaggagattgcggtggtatacttagatgtcaacacggtgtcgtagggatagtctctaccgggggaaacggcttggtggggttcgctgatgtgagggatcttctatggttggatgatgaagccatggaacagggcgtgtctgattacattaaa-gggcttggtgatgctttcggcatgggattcacagacgcagtgtcacgagaagttgaagctttgaagagtcacctgatcggctcagagggtgccgtggagaagattcttaagaacttagtaaaactcatctctgcgctcgtcattgtcatcaggagtgactatgacatggtcacattgacggcgacacttgccctgattgggtgccacgggagcccttgggcctggatcaaatcgaaaacagcttcaattttgggcataccaatggcccagaagcagagcgcttcttggctaaagaaattcaacgatgcggcgagtgccgctaaggggcttgagtggatttccaataagatcagtaaatttatcgattggcttaaggagaaaatcatcccggctgctaaagaaaaagtcgaatttttaaacaacttaaagcaacttccc-ttattggagaaccaaatctctaaccttgaacagtcagcagcttcgcaggaggaccttgaagcgatgtttggcaacgtgtcttacctggccca---------tttctgccgcaaattccaacctctctatgccacagaagcaaagagagtgtacgccctagaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcatcaggggctcacctggtactgggaagtctttagcaacagggattatcgctagagctatagcagataagtatcactctagtgtgtactccttgcctccagatccagatcattttgatggatacaaacaacagatcgtcactgttatggacgatctctgccaaaacccggatgggaaagacatgtcactattttgtcagatggtttccacagtggac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>AB575936.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_9612
----------------------------------------------------------------------------------------tgaggtacctttgtgcgcct-g-ttttacc------tccc--ct---cccc-c------ga-a-gcaacttagaag--------------ctgtgaaccaac-gatcaa-tagtaggtgtgacataccagtcatatctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaagagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccaccatgaacgaggcagagcgtttcgctcggca--caa-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattttgacatggtgcg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacacccacaaacca-gtggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaactaaa-------gagttgttaccatatagctattggattggccacccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-ggttttgtaccgt-----tgacgct--------------gaagtctgtggtc-acccttaattttatcttgatcctcaacacggtcaaa-----catgggctcacaggtatccacacaacgctccggctcgcatgaaaactctaactcagctactg-agggctccaccataaactacactaccattaattactacaaggactcctatgccgctacagcaggcaaacagagtcttaagcaggatccagacaagttcgctaatcctgtcaaagatattttcactgaaatggcagcaccactaaaatctccatctgctgaggcatgtggatacagcgatcgagtagcacagttaactattggcaactctaccatcactacacaagaagcggcgaacattatagttggctatggtgagtggccctcctactgctcggattctgacgctacagcagtggacaaaccaacgcgtccagatgtttcggtgaacaggttttacacattggacaccaaattgtgggaaaaat------------------cgtccaaaggatggtattggaaattcccggatgtgctaacagaaaccggggtttttggtcaaaatgcacaattccactacctttatcggtcagggttctgcattcacgtgcaatgcaatgctagtaaattccatcaaggggcactcctagtcgctgtcctcccggagtatgtcattgggacagtggcgggtggcacaggaacgg------aggatagtcaccccccctataagcagactcaacccggcgccgatggttttgagttacaacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtgccatacataaacgcactgccttttgattctgccttgaaccattgcaactttggcctactggttgtgcctattagtccgttagactacgaccaaggagcgacaccagtgatccctattaccatcacattagccccaatgtgctctgaatttgcaggtcttaggcaagctgtcacgcaaggatttcctacagagctgaaacctggcacaaaccaatttttaaccactgatgatggagtttcagcgcccattctaccaaactttcaccccaccccatgtatccatatacctggtgaagttaggaatttactagagctatgccaggtggagaccattttagaagtcaacaa----------tgtgcccacgaatgccactagcttg------atggagagactgcgctttccggtctcagcccaagcag------gaaaaggcgagttgtgtgcagtgttcagagccgaccctgggcgaaatggaccatggcaatctaccttgttgggccagttgtgcgggtactatactcaatggtcaggatcactggaagtcaccttcatgttcactgggtcctttatggccactggcaagatgcttatagcctacacaccgccaggaggcccattgcccaaggaccgagcgaccgccatgttgggtacgcatgtcatctgggatttcgggctgcaatcgtctgttacccttgtaataccgtggatcagcaacactcactacagagcgcatgctcgagatggagtgttcgactattacactacaggcttagttagcatatggtatcagacgaattatgtggttccaattggggcacctaatacagcctatataatagcattagcggcagcccagaagaattttactatgaaattatgtaaggatgccagtgatatcttacagacaggcactattcaaggagatagg--------gtggcagatgtgattg---aaagttctat--------------------------aggggatagtgtgaacagaaccctcacccaagctctaccggca--------cccacaggccagaatacgcaggtaagcagccaccgattggatactggtaaagttccagcactccaagccgctgagattggagcatcatcaaatgctagtgatgagagtatgattgagacacggtgcgttcttaattcgcacagcacagctgagaccactctcgatagtttcttcagcagagcggggttagttggggaaatagatctccctcttgaaggcacgac-taacccgaatggttatgcaaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctgttcacttacatgcgttttgacgcagagttcaccttcgttgcatgcacgcccaccggggaggttgtcccacaattgctccaatacatgtttgtgccacctggggcccccaagccagactccagagaatctctcgcatggcaaactgccaccaatccctcggtttttgtcaagctatcagatcccccagcacaggtttcagttccattcatgtcacccgcaagcgcttatcaatggttctatgacggataccccacattcggtgagcacaagcaggagaaagaccttgaatacggggcgtgtccaaataacatgatgggcacattctcagtgcggactgtaggaacctcgaagtccaagtaccctttggtgattaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccaaaactatctatttaaagccaacccaaattatgccggtaa----ctctatcaagccaactggtgccagtcgcacagcgat---caccac---------------------------------------actcggg------------------------------------------aaatctgggcaacaatctggggccatttacgtgggtaactttagagtggttaaccgccatcttgccactcaaaatgattgggcgaaccttgtttgggaagatagctctcgcgacttgctcgtgtcatctaccaccgcccaaggttgcgacacgattgcccgttgcaattgccagacgggggtgtactattgcaactcaaggagaaagcattacccggtcagtttctcaaaacccagcttgatctttgtagaggccagcgagtattacccagccaggtatcagtcgcacctcatgcttgcagtgggtcactcagaaccaggagattgcggtggcatacttagatgtcagcacggtgtcgtagggatagtctctaccgggggaaacggcttggtggggttcgccgatgtgagggatcttctatggttggatgatgaagccatggaacagggtgtgtctgattacatcaaa-gggcttggtgacgcttttggcatgggattcacagacgcagtgtcaagagaggttgaagctttgaaaaatcatttgatcggctcagagggcgccgtggagaagattcttaagaacttagtgaaactcatctcagcgcttgtcattgtcattaggagtgactatgacatggtcacattaacagcaacacttgccctgattgggtgccacgggagcccttgggcctggatcaagtcgaaaacagcttcaattttgggcataccaatggcccagaagcagagcgcctcttggctaaagaaattcaacgatgcggcgagtgccgctaaggggcttgagtggatttccaacaagatcagtaaatttatcgattggctcaaggagaaaatcatcccggctgctaaagaaaaagtcgaatttctaaataacttaaagcaacttccc-ttattggagaaccaaatctctaaccttgaacagtcagcagcttcacaggaggaccttgaagcgatgtttggcaacgtgtcttatctggccca---------tttctgccgcaaattccaacctctgtacgccacagaagcaaagagagtgtacgccctagaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttggtcatcaggggttcacctggtactgggaagtctttggcaacagggatcatcgccagagctatagcagataagtatcactctagtgtgtattctttgcctccagatccagatcattttgatggatataaacaacagatcgtcaccgttatggacgacctctgccaaaacccggatgggaaagacatgtcactattttgtcagatggtttccacagtggactttataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgatcgcctccactaatgctagtaacatcatagtaccaacagtctcagactcagatgccatccgtcgtcggttctttatggactgcgatattgaagtgaccgattcttataagacagatttgggtaggcttgacgcagggagagcggccaggctgtgctctgagaacaacaccgcaaacttcaaacggtgcagtccattagtttgtgggaaggcaatacagcttagggataggaagtccaaggtgagatacagtgtggacacagtggtgagtgagctcatcagggaatacaacaataggtcagctattggaaataccattgaagctcttttccaggggccccctaaatttagaccgataaagatt---agtctggatgagaggcccgcgcctgatgctattagtgacctgttagctagtgttgacagtgaggaagttcgtcaatactgt-agagaacaaggatggattgtgcctgacactcccaccaacgttgatcgccacttgaatagagctgttttgattatgcaatccgtagccaccgtggtagcagttgtgtcccttgtttacgtcatctataagttgtttgccggtttccagggagcatattctggtgcccccaagcaagcactcaagaaaccggtgctacgcacagcaactgtacagggaccgagcttggacttcgccctatctctacttagaaggaacattaggcaggtccaaaccgatcagggtcacttcacaatgctaggagtgcgagaccacttggctgtgctccccagacattcccaaccaggaaagaccatttgggttgagcataaactagtgaagatcgtagacgctgtggagttagtggatgaacaaggggttaacttagaactcacactggtaacgcttgacaccaatgagaaattcagagacatcacgaagttcataccagaaacaattagtcctgctagtgatgccaccttagttataaatactgaacatatgcccagcatgtttgtgccagttggagatgtggtccagtatggattcttgaatctcagtggcaagcccactcaccggactatgatgtacaacttcccaacaaaggcgggacagtgcggtggtgttgtgactgctgtaggcaaagtgattgggatccacattggtggtaatggtaggcaaggtttctgtgctgctctgaagagaggatacttttgcagcgaacaaggtgagatccagtggatgaagcccaacaaagaaactggcaggttgaacatcaatgggcctactcgcaccaagcttgagccaagtgtctttcatgatgtgttcgagggcatcaaagaaccagcagtgctgactagcaaagacccaaggctggaagtcgactttgagcaagctttgttttcaaaatacgtgggaaacacgcttcacgagcccgacgagttcgtcagggaggctgctttgcattatgccaaccaactcaaacagttagacattaaaaccaccaagatgagcatagaggatgcttgttacggcacagagaatctggaagctatagatcttcacactagtgcgggatacccgtacagtgcactaggaatcaagaaaagggatatcttggatccaacaactcgcgatgtcagtaaagtgaaattctacatggataagtatgggttggatctcccgtattctacttatgtcaaagatgaactcagggccattgacaagatcaagaaagggaaatctcgtctcatagaagcgagcagtttaaatgactcagtgtacttgaggatgacatttgggcacctttatgaaaccttccacgccaacccaggtacagtcaccggttcagctgttggatgtaacccagatgtgttttggagtaagttaccaattctactcccaggatcgctttttgcgttcgactactcagggtatgatgctagcctcagtccagtgtggtttagggcgttggagatagtcctgcgggaaattggatactctgaggacgcagtgtctctcatagaagggatcaatcacactcaccatgtgtaccgcaataaaacttattgtgttcttggaggaatgccctcaggttgctcaggtacctccattttcaactcgatgatcaataacattattatcagaacactcttgatcaaaacattcaaagggatagatctagatgagttgaacatggtggcctatggggatgatgtgttagctagttatcccttcccaattgattgtctagaattggcaaaaacaggtaaggagtatggattgactatgacccctgctgacaaatcaccctgctttaatgaagttacgtgggagaatgctaccttcctgaagagaggattcttgcctgaccaccaatttccgttcctcattcaccctacaatgccaatgaaggagattcacgagtccattcgttggaccaaagacgcacgaaacacccaagatcacgtgcgctccctctgcttgttagcatggcacaacgggaaagaggagtatgaaaaatttgtaagtacaattagatcggttccaattggaaaagcgttggctataccaaattttgagaatctgagaagaaattggctcgaattgtttt--aa-atttgcagttt-------------------------gtaa---------------ctgaaccc-caccagaa----at-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>DQ341359.1_Human_enterovirus_71_isolate_S10862-SAR-98_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgtcagcactctggtactgaggtacctttgtgcgcct-g-ttttacc------tccc--tt---tccc-c------ga-a-gtaacttagaag--------------ctttgaaccaac-gatcaa-cagtaggtgtggcataccagtcacatcccga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaggagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccaccatgaatgaggcagagcgtttcgctcggca--cta-cccca---gtgtagatcaggctgatgagtcactgca-atccccatgggcgaccatggcagtgactgcgctggcggcctgcccat--------ggagaaa-tccatgggacgctctaattttgacatggtgcg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacacccacaaacca-gtggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgctggctgcttatggtgacaatcgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtc-----tacctg----tttgtt-ggttttgtaccac-----tgacatt--------------aaagtctgtaatc-actctcaattttatcttgaccctcaacacagtcaag-----catgggctcacaagtgtccacgcaacgctccggctcgcatgaaaactctaactcagctactg-agggttccactataaactacactaccattaattactacaaggactcctatgccgccacagcaggcaaacagagtcttaagcaggatccagacaagtttgcaaatcctgtcaaagatattttcactgaaatggcagcgccactaaaatctccatctgctgaggcatgtggatacagcgatcgagtagcacagctaactattggcaactctaccatcactacacaagaagcggcaaacattatagtcggctatggtgaatggccctcttattgctcggactctgacgctacagcagtggacaaaccaacgcgcccagatgtctcagtgaataggttctacacattggacaccaaattgtgggagaaat------------------cgtccaaggggtggtattggaaattcccggatgtcctaacagaaaccggagtttttggccagaatgcacaattccactacctctatcggtcagggttctgcattcacgtgcaatgcaacgctagtaaattccatcaaggggcactcctagttgctgtccttccggagtacgttattggaacagtggcgggtggcacaggaacgg------aagatagtcaccccccctacaagcagacccaacccggcgccgacggctttgagttacaacacccatacgtacttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaataactgcgccacaataatagtgccatacataaacgcactgccctttgattctgccttgaaccattgcaattttggcctattggttgtgcccattagcccgctagactatgaccaaggagcgacgccagtgattcctattaccatcacattggctccaatgtgttccgagttcgcaggtcttaggcaagcagtcacgcaagggtttcctactgagctgaaacctggcacgaaccaattcttaaccactgacgatggcgtttcagcgcccattctgccaaactttcaccccaccccatgtatacatatacctggtgaggtcaggaatttgctagagctgtgccaggtggagaccattttggaagtcaacaa----------tgtacccacgaatgccaccagcttg------atggagagactgcgctttccggtctcagcccaagcag------gaaaaggcgagttgtgtgcagtgttcagagccgaccctgggcgaagtggaccatggcaatccaccctgttgggccagttgtgcgggtactacactcaatggtcaggatcactggaagttacattcatgttcactgggtcctttatggctactggcaagatgcttatagcctacacaccgccaggaggccctttgcccaaggatcgagcgaccgccatgctgggtacgcatgtcatctgggatttcgggctacaatcgtctgtcacccttgtaataccatggattagcaacacccactacagagcgcatgctcgagatggagtattcgactattacaccacaggcttggttagtatatggtatcagacaaattacgtggttccaattggggcacccaacacagcctatataatagcactagcggcagcccagaagaattttactatgaaattgtgcaaggatgctagtgacatcttgcagacaggcactattcagggagatagg--------gtggcggatgtgattg---agagttctat--------------------------aggggatagtgtgagcagagctctcacccaagctttaccggca--------cccacaggccagaatacgcaagtaagcagccaccggttggataccggtaaagttccagcactccaagccgctgagattggagcatcatcaaatgccagtgatgagagcatgattgaaacacggtgtgttcttaattcgcacagcacagctgagaccaccctagatagtttcttcagcagagcgggactagttggggagatagacctccctcttgaaggcacaac-taacccgaatggttatgctaactgggacatagacattacaggttatgcgcaaatgcgcagaaaggtggagttgttcacctatatgcgttttgacgcggagttcaccttcgtcgcatgtacgcctaccggggaggttgtcccacagttgctccaatatatgtttgtgccacctggggcccccaagccagactccagagaatccctcgcatggcaaactgctaccaatccctcggtttttgttaaattatcagatcccccagcacaagtttcagttccattcatgtcacctgcgagtgcttatcaatggttctatgacggatatcccacgtttggtgagcacaagcaagagaaagaccttgaatatggggcatgtccaaacaacatgatgggcacgttctcagtgcggaccgtagggacctcgaaatccaagtaccctttggtgattaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccaaaactatctattcaaagccaacccaaattatgctggcaa----ctctattaagccaaccggtgccagtcgcacagcgat---caccac---------------------------------------tctcggg------------------------------------------aaatttggacaacaatccggggccatttacgtgggtaactttagagtggttaaccgccaccttgccactcaaaatgattgggcgaaccttgtttgggaagacagctctcgcgacttgctcgtgtcatccaccactgcccaaggttgcgacacgatcgcccgttgtaattgccagacaggggtgtattattgcaattcaaggaggaagcactacccagtcagcttctcaaaacccagcttgatctttgtagaggccagtgagtattacccagccaggtatcaatcacaccttatgcttgcagtgggtcactcagaaccaggagattgcggcggcatacttagatgtcagcacggcgtcgtagggatagtctccaccgggggaaacggtttggtagggttcgccgacgtgagggaccttctatggttggatgatgaagccatggaacagggtgtgtctgattacattaaa-gggcttggtgatgcttttggcatgggattcacagacgcagtatcaagagaggttgaagctctgaaaaaccacttgatcggctcagaaggtgccgtggaaaagattcttaagaacttggtaaaactcatttctgcactcgttatcgtcattaggagtgactacgacatggtcacattgacggcaacgcttgccctgattgggtgccacgggagcccttgggcctggattaaatcgaagacagcttcaattttgggcataccaatggcccagaaacagagcgcctcctggctaaagaaattcaacgatgcggcgagtgccgctaaagggcttgagtggatttccaacaagatcagcaagtttatcgattggctcaaggagaaaatcatcccggctgccaaagaaaaagtcgaatttctaagtaacttgaagcaacttccc-ttattggaaaaccaaatctctaaccttgaacagtcagcagcttcacaggaggaccttgaagcgatgtttggtaatgtgtcttatctggccca---------tttctgccgcaaattccaacccctctatgccacagaagcaaagagagtgtacgccctagaaaaaagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcatcagaggctctcctggtactggtaaatctttagcaacagggattatcgctagagctatagcagacaagtaccactctagtgtgtattccctacctccagatccagatcattttgatggatataaacaacagatcgttactgttatggacgacctctgccaaaacccggatgggaaagacatgtcactattttgtcaaatggtctccacagtggactttataccacctatggcatctctggaggagaaaggagtctcattcacctccaagtttgtgattgcctctactaatgctagtaacatcatagtaccaacagtttcggactcggatgccatccgtcgtcggttctttatggactgcgacattgaagtgaccgattcctataagacagatttgggtaggcttgatgcagggagagcggccaggctgtgttctgagaacaacaccgcaaacttcaaacggtgcagtccactagtttgtgggaaggcaatccagcttagggataggaagtccaaggtgagatacagtgtagacacagtggtgagtgagctcatcagggagtacaacagcagatcagctattgggaataccattgaagctcttttccaggggccccataaattcagaccgataaagatt---agcctggaggagaagcccgcacctgatgctattagtgacctgttagctagtgttgacagtgaagaagttcgccaatactgt-agagaacatggatggattgtgcctgacactcctaccaacgttgaacgccacttgaatagagctgtcttgattatgcagtccgtagccaccgtggtagcagttgtgtcccttgtttacgtcatctacaagctgtttgccggttttcagggagcatattccggtgcccccaagcagacactcaagaaaccggtgctacgtacagcaactgtacaggggccgagcttggacttcgctctatccctactcagaaggaacattaggcaggttcaaaccgatcagggacacttcacaatgttaggagtgcgagaccatttggctgtgctccccagacactcccaaccaggaaagaccatctggattgagcacaaactggtgaagatcgtagatgctgtagagctagtagatgaacaaggggttaacctagaactcacactggtaacgcttgataccaatgaaaaatttagagacatcacgaagtttataccagagacaatcagccctgctagtgatgccaccttggttatcaacactgaacatatgcccagcatgtttgtgccagttggagatgtggtccagtatggattcttaaatcttagtggcaagcccacccaccgaactatgatgtacaacttcccaacaaaggcgggacagtgtggtggtgttgtgaccgctgtgggtaaagtgattggaatccacatcggcggtaatggtaggcaaggcttctgtgctgctctgaagagagggtacttttgcagtgaacaaggtgagatccagtggatgaagcccaacaaagaaactggtaggttgaacattaatgggcctactcgcaccaagcttgagccaagtgtctttcatgatgtgtttgagggtaccaaagaaccagcagtgctgactagtaaagacccaagactggaagtcgattttgagcaagctttgttttcaaaatacgtgggaaacacgcttcacgagcccgacgagttcgtcagagaggcggctttgcattatgccaaccaactcaaacagttagatatcaaaaccaccaagatgagcatagaggatgcttgttacggtacagagtacctggaagctatagatcttcacactagtgcaggatacccatacagtgcactaggaatcaagaaaagggatattttggatccaacaactcgtgatgtcagtaaaatgaaattctacatggataagtatgggctggatctcccgtactctacttatgttaaagatgaactcagggccattgacaagatcaaaaaagggaaatcccgcctcatagaggcgagcagtctaaatgactcagtatatttgaggatgacatttgggcacctttatgaaaccttccacgccaatccaggtacagtcaccggttcagctgttggatgcaatccagatgtgttttggagcaagttaccaatcttactcccaggatcgctttttgcgttcgactactcagggtatgatgctagtctcagcccagtgtggttcagggcgttggagatagtcctgcgggagattggatactctgaggatgcagtatccctcatagaagggatcaatcacacccaccatgtgtaccgcaataaaacttattgtgttcttggaggaatgccctcaggttgctcaggtacctccattttcaactcgatgatcaataatattattatcaggactctcttgatcaaaacattcaaagggatagatctagatgaattgaatatggtggcctatggggatgatgtgttagctagttatcccttcccaattgactgtctagaattggcaaaaacaggtaaggagtatggcttgactatgacccctgctgacaagtcaccctgctttaatgaagttacgtgggagaatgccaccttcctaaagagaggattcttgcctgaccatcagttcccgttcctcattcaccctacgatgccaatgaaggagattcacgagtccattcgttggaccaaagacgcacgaaacactcaagatcacgtgcgctccctctgcttgttagcgtggcacaacgggaaagaggagtatgagagatttgtaagtacaattagatcggttccaattggaaaagcgttggctataccaaattttgagaatctgagaagaaattggctcgaattgtttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575938.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_10098
--------------------------------------------------cccaca-gggcccat-t-gggcgt-agcactctggtactgaggtacctttgtgcgcct-g-ttttacc------tccc--tt---cccc-a------aa-a-gtaacttagaag--------------ctttgaactaat-gatcaa-tagtaggtgtggcagaccagtcacatctcga-tcaagcacttctg-tctccccggactgagtatcaataggctgc-ttacgtggctgaaagagaaaacgttcgttacccgaccaactacttcgagaagct-tagtaccaccatgaacggggcagagcgtttcgctcggca--cta-cccca---gtgtagatcaggctgatgagtcactgca-acccccatgggcgaccatggcagtggctgcgctggcggcctgcccat--------ggagaga-tccatgggacgctctaactttgacatggtgcg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacacccacatgcca-gtggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaatcgaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtc-----tatcag----tttatt-ggctttgtaccac-----tgacatt--------------aaagtctgtaatt-acccttaattttatcttgacccttaatacagttaag-----catgggttcacaggtgtccactcaacgctccggctcgcatgaaaactctaactcagctactg-agggctccaccataaactacaccaccattaattactacaaagactcctatgccgctacagcaggcaagcagagcctcaaacaagatccagataagtttgcaaatcctgtcaaggatatcttcactgaaatggcggcgccactaaaatctccatctgctgaggcgtgtggatacagtgaccgagtagcacagttaactatcggtaattctaccatcaccacacaggaagcggcgaacattatagttggctatggtgagtggccttcctactgctctgattctgacgctacagcagtggataaaccaacgcgcccagatgtctcagtaaataggttctatacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaaattcccggatgtattaacagaaaccggggtttttggccaaaatgcacaattccactacctctaccggtcagggttctgcacccacgtgcaatgcaacgcaagtaaattccaccaaggggcactcctagttgctgttctcccggagtacgttattggaacagtggcaggtggtacagggacag------aagatagtcaccccccttacaagcagacccagcccggagctgatgggttcgagctacagcacccgtacgtgcttgatgctggcattccaatatcacaactgacagtatgcccacatcagtggattaacttgaggaccaacaattgtgccactataatagtgccatacataaatgcactgcccttcgattctgctctaaaccattgcaactttggtctactggttgtacctattagtccgttggacttcgatcaaggagcgacgccagtgatccctatcactatcacactagctccaatgtgttctgagttcgcaggtcttaggcaagcagtcacacaagggttccccactgaactgaaacctggcacaaaccaattcttgaccactgacgatggtgtctcagcacccattctaccaaacttccaccccaccccatgtatccatatacctggagaagtcagaaatttattagagctgtgccaggtggaaaccattttggaagtcaacaa----------tgtacctacgaatgccaccagttta------atggaaaggctgcgctttccggtctcagcccaagcag------gaaagggtgagttgtgtgcagtgttcagagccgaccctggacgaaatggaccatggcagtctactttgttgggccagttgtgcggatactacactcaatggtcaggatcactggaggttacgtttatgtttactgggtccttcatggctaccggaaagatgcttatagcctacacaccaccaggaggccctctgcccaaagaccgagcgaccgccatgttgggcacgcatgttatttgggacttcgggctacaatcgtctgtcacccttgtaataccatggatcagcaacacccactacagagcacatgctcgagatggagtgttcgactattacactacaggcctggtcagtatttggtatcagacaaattatgtggttccaattggggcgcccaatacagcctacataatagcattagcggcagcccagaaaaactttactatgaaattgtgtaaggatgccagtgatatcttgcagacaggcactattcagggagatagg--------gtggcagatgtgattg---agagttctat--------------------------aggagatagtgtgagtagagctctcacccaagctttaccagca--------cccacaggccaaaacacgcaagtaagcagccaccgtttggacactggtaaagttccagcactccaagccgctgaaattggagcatcatcaaatgctagtgacgagagtatgattgagacacggtgtgttctcaattcacacagcacagctgagaccactctcgatagtttctttagtagagcggggttagttggggagatagacctccctcttgaaggcacaac-caacccgaatggttatgctaattgggacatagatataacaggttatgcacagatgcgtagaaaggtggagttgttcacctacatgcgttttgacgcagagttcacctttgttgcatgcacgcccaccggggaggtagttccacaactgctccaatacatgttcgtgccacctggggctcccaagccagactccagagaatcccttgcatggcaaactgccaccaatccctcggtctttgtcaagttatcagatcccccagcacaggtctcagttccattcatgtcacctgcgagtgcctaccaatggttctacgacgggtatcccacgttcggtgagcacaagcaggagaaagatcttgaatatggggcatgtccaaacaatatgatgggtacgttctcggtgcggaccgtgggaacctcgaaatccaagtaccctttggtgattaggatttacatgaggatgaagcatgtcagggcgtgggtacctcgcccgatgcgtaaccaaaactatctattcaaagccaacccaaattacgccggtaa----ctccattaagccaactggtactagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaattcgggcaacaatccggggccatttacgtgggtaactttagagtggttaaccgccaccttgccacccacaatgattgggcgaacctcgtttgggaagacagctcccgcgacttgctcgtgtcatccaccaccgctcagggttgtgacacaattgcccgctgcgattgtcaaacaggggtgtattattgcaactcgaagagaaagcactacccggtcagcttttcaaaacctagcttgatctacgtagaggccagcgagtattacccagctaggtatcagtcgcacctcatgcttgcagtgggtcactcagaaccaggagattgcggcggcatactcaggtgtcagcatggtgttgtagggatagtctccacaggaggaaacggcttggtggggtttgctgatgtgagggatcttctatggttagatgatgaagctatggaacagggtgtgtctgattacattaag-ggccttggcgatgctttcggcatggggttcacagacgcggtaacgagagaggttgaagccctaaaaaatcacttaatcggttcagaaggcgctgtggaaaggattcttaagaacttagtgaaacttatctctgcactcgtcatcgtcatcaggagtgactacgacatggtcacgttgacggcaacactagccctgattgggtgccacgggagcccttgggcctggattaagtcgaaaacagcttcaatcctgggtataccaatggcccagaagcagagcgcctcctggtttatgaaattcaacgctgcggcgagtgccgctaaagggcttgaatggatttccaataagatcagtaaatttattgattggctcaaagagaaaatcatcccggcagctaaagaaaaggttgagttcttaaacaatttaaagcaacttcct-ttactggagaatcagatctccaatcttgaacaatcggcagcttcacaggaggaccttgaggcactgtttggcaatgtgtcttacctggccca---------cttctgccgcaaatttcaacccctctacgccacagaagcaaagagagtgtacgccctagaaaaaagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattagaggctcacctggtactggcaagtccctagcaacaggaattattgctagagctatagcagacaagtatcactctagtgtgtattctttacctccagacccagatcactttgatgagtacaaacaacaggtcgtcactgttatggacgacttctgtcaaaaccccgatgggaaagatatgtcactattttgtcagatggtgtccacagtggacttcataccacctatggcatctttggaggagaagggggtctcattcacctccaagtttgtgattgcctccaccaatgctagtaacattatagtgccaacagtttcagattcagatgccatccgtcgtcggttctttatggactgcgatattgaagtgaccgactcctacaagacagatttgggcagacttgatgcagggagagcagctaggttgtgctctgagaataacaccgcaaattttaaacggtgcagtccgttagtctgtgggaaagcaatacagcttagggataggaaatctaaggtgagatacagtgtggacacagtggtaagtgagctcatcagggaatacaacagcagatcagccattgggaataccattgaagctctttttcaagggccccccaaatttaaaccgataaggatt---agcctggaggagaagcccgcacccgacgctatcagcgacttgctagctagtgttgatagtgaagaggttcgccaatactgc-agagaacaaggatggattgtgcctgacacccctaccaacgttgaacgccacttgagcagagctgttttgattatgcaatccgtggccaccgtggtagcagttgtatcccttgtttacgtcatctacaagttgtttgccggttttcagggagcatattccggtgctcccaagcaaacactcaagaagccagtgctacgtacagcaactgtacagggaccgagcttggacttcgccctatctctacttaggaggaatattaggcaggtccaaaccgatcagggccacttcacaatgttaggagtgcgagaccacctggctgtgctccccagacactcccaaccaggaaagaccatctgggttgagcacaaactagtgaagatcgtagatgctgtggagttggtggatgaacaaggggttaacttggaactcacactggtgacacttgacactaatgaaaaatttagggatatcacgaggtttataccagaaacaattagccctgctagtgatgccaccctagttataaacactgaacatatgcccagcatgttcgtgccaattggcgatgtggtccaatatgggttcttaaatcttagtggcaagcccacccaccggactatgatgtacaatttcccaacaaaggcgggacagtgtggtggtgttgtgaccgccgtaggcaaagttattgggatccatattggtggtaatggtaggcaaggcttttgtgctgctctgaagagagggtacttttgtagtgagcaaggtgagatccagtgggtgaagcccaacaaagaaactggtaggctgaacattaatgggcccactcgcaccaagcttgaaccaagtgtctttcatgacgtgttcgagggcaccaaagaaccagcagtgttgaccaacaaagaccctaggttggaagttgattttgagcaggctttgttctcaaaatacgtgggaaacacgctccacgaacccgacgaattcgttagggaggcggctctgcattatgccaaccaactcaagcagttagacatcaagaccaccgcaatgagcatagaggatgcttgctatggtacggagaacctggaagctatagatcttcacaccagtgcaggatacccatacagtgcactaggcatcaagaaaagggatattttggacccaacaactcgcgatgtcagtaaaatgaaattttacatggataagtatgggctggatctcccatattctacatatgttaaagatgaactcagggccattgacaagatcaagaaagggaagtctcgtctcatagaagcgagcagtctaaatgattcagtgtacttgaggatgacgtttgggcacctttatgaaacctttcacgccaatccaggtacagtcaccggttcagctgttggatgtaacccagatgtgttttggagtaagttaccaattttactcccaggatcgctttttgcgtttgactactcagggtatgatgctagtctcagcccagtgtggttcagggcgttagaaatagtcctgcgggaaattggatattctgaggaagcagtgtctctcatagaagggatcaaccacacccaccatgtgtaccgcaacaaaacttattgtgtccttggaggaatgccctcaggctgctcaggtacctcaattttcaactcgatgatcaataatattattatcaggacacttttgatcaaaacattcaaggggatagatctcgatgaattgaacatggtggcctatggggacgatgtgttagctagttaccccttcccgattgactgttcagagttggcgaagacaggtaaggagtacggtctgactatgacccctgctgacaaatcaccctgctttaatgaggtcacatgggagaatgccaccttcctaaagagaggattcttacctgaccatcagttcccattccttatccaccctacgatgccaatgaaggagattcacgagtctattcgctggaccaaagatgcacgaaacactcaagatcacgtgcgctctctctgcttgctagcatggcacaatgggaaagaggagtatgaaaaatttgtaagcacaatcagatcggttccaatcgggagagcattagccataccaaactttgagaacttaagaagaaattggcttgaattgtttt--aa-ttttacagttt-------------------------ataa---------------ctgaaccc-caccagaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC954664.1_Enterovirus_A71_isolate_VR1432_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgcaagcactctggcacttcggtacctttgtgcgcct-g-ttttata------tccc--ct---cccc-c------aa-t-gaaatttagaag--------------cagcaaacc-cc-gatcaa-tagcaggcataacgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaagcc-tagtaacaccatggaagttgcggagagtttcgttcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacggacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagcca-gtggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcgatcgtt-----taccta----tttatt-ggttttgtaccat-----tgacact--------------gaagtctgtgatc-acccttaattttatcttaaccctcaacacagccaaa-----catgggctcacaggtatccacacaacgctccggttcgcatgaaaactctaactcagccactg-agggttccaccataaactacactaccattaattattacaaggactcctatgccgccacagcaggcaagcagagcctcaagcaggatccagataagtttgcaaatcctgtcaaagatattttcactgaaatggcagcgccactaaagtccccatctgctgaggcatgtggatacagcgatcgagtagcgcagttaactattggcaactctaccatcactacacaagaagcagcaaacatcatagttggctatggtgagtggccttcctactgctcggactctgacgctacagcagtggacaagccaacgcgcccagatgtttcggtgaataggttttacacattggacactaaattgtgggagaaat------------------cgtccaagggatggtactggaaattcccggatgtgttaactgaaaccggggtttttggccaaaatgcacaattccactacctctatcggtcagggttttgcatccacgtgcaatgcaatgctagtaagttccatcaaggagcactcctagtcgctgtcctcccggagtatgtcattgggacagtggcaggtggtatagggacgg------aggacagtcaccccccttacaagcagactcaacccggcgccgatggttttgaattgcaacacccgtacgtgcttgatgctggcattccaatatcacaattaacagtgtgcccacatcagtggattaatttgaggaccaacaattgtgccacaataatagtaccatacataaacgcactgccctttgattctgccttgaaccattgtaactttggcctgctggttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggtttcccactgagctgaaacctggcacaaatcaatttttaaccactgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtgcccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgttcagagccgatcctgggcgaagtggaccgtggcaatccaccttgctgggtcagttgtgcgggtactacacccaatggtcaggatcattagaagtcaccttcatgtttactgggtccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggccctttgcccaaggaccgggcaaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcgcatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacaaattacgtggttccaattggggcgcccaatacagcctatataatagcactagcggcagcccaaaagaacttcactatgaaattgtgcaaggatgctagtgatatcctgcagacgggcaccatccagggagatagg--------gtggcagatgtaattg---aaagttccat--------------------------aggagatagcgtgagtagagccctcactcacgctctaccagca--------cccacaggccagaacacacaggtgagcagtcatcgactggatacaggcaaggtcccagcactccaagccgctgagattggagcatcatcaaatgctagtgatgagagtatgattgagacacgatgcgttcttaactcgcacagcacagctgagaccactctcgatagcttcttcagcagagcggggttggttggagagatagacctccctcttgaaggcacaac-taacccgaatggttatgcaaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtggagctgttcacctacatgcgttttgacgcagagttcacctttgttgcgtgtacgcccaccggggaagttgtcccacaattgctccaatatatgtttgtgccacccggggcccccaagccagattccagagaatccctcgcatggcaaactgccaccaacccctcggtttttgttaagctatcagaccccccagcacaggtttcagttccatttatgtcacccgcgagtgcttatcaatggttttatgacggatatcccacattcggtgaacacaagcaggagaaagaccttgaatacggggcatgtccaaacaacatgatgggtacattctcagtgcggaccgtaggaacctcgaagtccaagtaccctttagtgattaggatttacatgaggatgaagcacgtcagggcgtggatacctcgcccaatgcgtaaccaaaactatctattcaaagccaacccaaattatgctggtaa----ctctatcaagccaaccggtgccagtcgtacagcaat---caccac---------------------------------------tctcggg------------------------------------------aaatttggacaacagtccggggccatttacgtgggtaactttagagtggttaaccgtcatcttgccactcataatgattgggcgaaccttgtttgggaagacagctctcgtgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgcccgttgcaattgccagacaggagtgtactattgtaattcaaggagaaaacactacccggtcagtttctcaaaacccagcttgatctatgtagaggccagcgagtattacccagccaggtatcagtcacaccttatgctcgcagtgggtcactcggaaccaggagattgcggtggcattctcagatgtcaacacggtgtcgtagggatagtttctaccgggggaaacggcttggtggggtttgctgatgtgagggatcttttgtggttggatgatgaagccatggaacagggtgtgtctgattatatcaaa-gggcttggtgatgctttcggcatggggttcacagacgcagtgtcaagagaggttgaagctttgaaaaaccatttgatcggctcagagggtgccgtggagaagattcttaagaacttagtaaaacttatctctgcgctcgtcatcgtcatcaggagtgactatgacatggtcacattgacggcaacacttgccctgattgggtgccacgggagcccttgggcctggataaagtcgaaaacagcatcaattttaggcataccaatggctcagaagcagagtgcctcttggctaaagaagttcaacgatgcggcaagcgctgctaaggggcttgagtggatttccaacaaaatcagcaagtttatcgattggctcaaggagaaaatcattccggccgctaaagaaaaagttgagtttctaaacaatttaaagcaactcccc-ttattggagaaccagatttctaaccttgaacagtcagcagcttcgcaggaggaccttgaagcgatgtttggcaacgtgtcttacctggctca---------cttctgccgcaaattccaacccctctatgccacagaagcaaagagggtgtacgccctggaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttggtcatcagaggctcgcctggtactgggaagtctttagcaacagggattattgctagagctatagcagacaagtaccactctagtgtgtattccttacctccagacccagatcattttgacggatacaaacaacagatcgtcactgttatggacgacctctgccagaacccggatgggaaagacatgtcactattttgtcagatggtttccacagtggactttataccgcctatggcatctctggaggagaagggagtctcattcacctccaagtttgtgattgcctccactaacgctagtaacatcatagtaccaaccgtctcggattcagatgccatccgtcgtcggttctttatggactgtgatattgaagtgaccgattcttataagactgatttgggtaggcttgatgcagggagagcggccaggctgtgctctgagaacaacactgcaaatttcaaacggtgcagtccattggtctgtgggaaagcaatccagcttagggataggaagtccaaggtgagatacagtgtggacacggtggtgagtgagctcatcagggaatataacaacaggtcagctattgggaataccatcgaagctcttttccagggaccccctaaattcagaccgataaggatt---agcctggaggagaagcctgcacctgatgctattagtgacctgttagctagtgtcgatagtgaagaagttcgccaatattgt-cgagatcaaggatggattgtgcctgatactcccaccaacgttgagcgtcacttgaatagagctgttttgattatgcaatccgtagccaccgtggtagcagttgtgtcccttgtttacgtcatctacaagttgtttgccggttttcaaggagcatattccggcgcccccaagcaaacacttaagaaaccagtactgcgtacagcaactgtgcagggaccgagcttggacttcgccttatctctactcagaaggaacattaggcaggtccaaaccgaccagggccacttcacaatgctaggagtgcgcgaccacttggctgtgctccccaggcactcccaaccaggaaagaccatttgggttgagcacaaattagtgaagatcgtagatgctgtggagttagtagatgaacaaggggttaacctagagctcacactggtaacacttgacaccaacgaaaaattcagagacatcacaaggttcataccagaaacaattaaccctgctagtgatgccaccttagttataaatactgaacatatgcccagtatgtttgtgccagttggagatgtggtccagtatggattcttgaaccttagtggcaagcccactcaccggactatgatgtacaatttcccaacaaaggcaggacagtgtggtggtgttgtgactgctgtgggtaaagtgattgggatccacattggtggcaatggtaggcaaggcttctgtgctgctctgaagagaggatacttttgcagtgaacaaggtgagatccaatggatgaaacccaacaaagaaactggcaggttgaacatcaatggacctactcgcaccaagcttgaaccaagtgtctttcatgatgtgttcgagggcaccaaagagccagcagtgctgactagtaaagacccaaggctagaagtcgactttgagcaggctttattttcaaaatatgtgggaaacacgcttcacgatcccgacgagtttgtcagggaggcggctttgcattatgccaaccaactcaaacagttagatatcaagaccaccaagatgagcatggaggatgcttgttacggtacagagaacctggaagctatagatcttcacactagtgcaggatatccatatagtgcactgggcattaagaaaagggatattttggacccaacaactcgcgatgtcagcaaaatgaagttctacatggacaagtatgggttggatctaccgtactccacttatgttaaagatgaactcagggccatcgacaagatcaagaaagggaagtctcgtctcatagaagcgagcagtctaaatgactcagtgtacttaaggatgacatttggacacctttatgaaacctttcacgccaatccaggtacagtcactggttcagctgttggatgtaacccagatgtgttctggagtaagctaccaattctgctcccaggatcgctctttgcgttcgactactcagggtatgatgctagtctcagcccagtgtggttcagggcattggagatagtcctgcgggaaattggatactctgaggacgcggtgtctctcatagaagggatcaatcacacccaccatgtgtaccgcaataaaacttattgtgttcttgggggaatgccctcaggttgctcaggcacctccattttcaactcgatgatcaataatatcatcatcaggacactcttgattaaaacattcaaagggatagatctagatgaattgaacatggtggcctacggggatgatgtgttagctagttatcccttcccaattgactgtctagaattggcaaagactggtaaggaatatggtttgactatgacccctgccgacaaatcaccctgctttaatgaagttacatgggagaatgccaccttcttgaagagaggattcttgcctgatcatcaattcccgttcctcatccaccccacgatgccaatgagggagattcacgagtccattcgttggaccaaagatgcacgaagtactcaagatcacgtgcgctccctctgtttattagcatggcacaacgggaaagaagagtatgaaaagtttgtgagtgcaatcagatcggttccaattgggaaagcgttggctataccaaatttcgagaatctgagaagaaattggctcgaattgtttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagaa----gtctggt------c-g-----cgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>DQ341355.1_Human_enterovirus_71_isolate_06-KOR-00_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-c-gggcgccagcactctggtactgaggtacctttgtgcgcct-gtttttact------cccc--tt----ccc-c------ga-a-gtaacttagaag--------------ctgtgaatcaac-gatcaa-cagtaggtgtgacacaccagtcacatctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-ttgcgcggctgaaggagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccaccatgaacgatgcagagtgtttcgttcagca--caa-cccca---gtgtagatcaggctgatgagtcactgca-atccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgcg-aagagcctattgagctagctggtaatcctccggcccctgaatgcggctaatcccaactgcggagcacacgctcacaagcca-gtggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatactggctgcttatggtgacaatcaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----tatcta----tttgtt-ggttttgtaccat-----tgacact--------------gaagtctgtgatt-acccttaactttattttgactctcaacacaattaaa-----catgggctcacaggtatccacacaacgctccggctcgcatgaaaattctaactcagccactg-aggggtccaccataaactatacaaccattaattactataaggactcctatgccgctacggcaggcaagcagagcctcaagcaggacccagacaagtttgcaaatcctgtcaaagacattttcactgaaatggcagcaccattaaaatccccatctgctgaggcatgcggttacagtgatcgagtggcacagttgactattggtaattctaccatcactacacaagaagcagcaaacatcatagttggttatggcgagtggccttcctactgctcggattctgacgctacggcggtggacaaaccaacgcgcccagatgtttcggtgaataggttttacacattagacaccaaattgtgggaaaagt------------------catccaagggatggtactggaaattcccggatgtgttaactgaaaccggggtttttggccaaaatgctcaattccattacctctaccgatcagggttctgcattcacgtgcagtgcaatgccagcaaattccatcaaggagcactcctagttgctgtccttccagagtatgttattgggacagtggcaggtggcacagggacgg------aggatagccaccccccttacaagcagactcaacccggtgctgatggcttcgaattacaacacccgtatgtgcttgatgctggcattccaatatcacaattaacagtgtgtccacaccagtggattaatttgagaaccaacaattgtgccacgataatagtaccatacataaacgcgctaccctttgattctgcattgaaccattgcaacttcggcctgctggttgtgcctattagcccgctagatttcgatcaaggtgcaacaccagtgatccccattaccatcacgctggccccaatgtgttctgaatttgcaggtcttaggcaagcagttacacaagggtttcctactgagctgaaacctggcacaaaccaatttttaaccactgacgatggtgtttcagcacccattctaccaaactttcaccccaccccgtgcatccacatacctggcgaagttagaaacctgctagagctatgccaggtggaaaccatcctcgaggttaacaa----------tgtacccacgaatgccactagctta------atggagagactgcgcttccctgtttcagcccaagcag------ggaaaggtgaactgtgtgcagtgttcagagcagaccctgggcgaagtggaccatggcagtccaccttgctgggccagttgtgcgggtactacacccaatggtcaggatcactggaagtcacttttatgttcactgggtccttcatggccaccggcaagatgctcatagcctacacaccaccagggggccccttgcccaaggaccgggcgactgccatgttgggtacgcatgttatctgggactttgggttgcaatcgtctgtcacccttgtaataccatggatcagcaacactcactacagagcacatgctagagatggagtgttcgactactacaccacaggtctggttagcatatggtaccagacgaattatgtggttccaatcggggcacccaatacagcttacataatagcattggcggcagcccagaaaaatttcaccatgaagttgtgcaaggatgctagtgatatcttacagacaggcactattcagggagatagg--------gtggcagatgtgattg---agagttccat--------------------------aggggatagtgtgagcagagccctcacccaagctctaccagca--------cccacaggccagaacacacaggtaagcagccatcgattagacactggtaaagttccagcactccaagccgctgaaattggagcatcatcaaatgctagtgatgagagtatgattgagacgcgctgcgtccttaattcgcacagtacagctgagaccactctcgacagttttttcagcagagcggggctagttggagagatagatctccctcttgaaggtacaac-taacccaaacggatatgcaaattgggacatagatataacaggttacgcgcaaatgcgtagaaaagtggagctgttcacctacatgcgttttgacgcagagttcacctttgttgcgtgcacgcctaccggggaagttgtcccacaattgctccaatatatgtttgtaccacctggggcccccaagccggactccagggaatccctcgcatggcaaactgctaccaatccctcggtttttgttaagttgtcagatcccccagcacaggtttcagttccattcatgtcacctgcgagcgcttatcaatggttctatgacgggtatcccaccttcggtgaacacaagcaggagaaagacctcgagtatggggcatgcccaaacaatatgatgggcacattctcagtgcgaaccgtagggacctcaaaatccaagtacccattggtgatcaggatttatatgaggatgaagcatgtcagggcgtgggtgcctcgcccaatgcgtaaccaaaattatctattcaaagccaacccaaattacgctggtaa----ctctatcaaaccaaccggtgctagtcgcacagcgat---caccac---------------------------------------tctcggg------------------------------------------aagtttggacaacagtccggggctatctacgtgggtaactttagagtggtaaaccgtcatcttgccactcataacgattgggtgaaccttgtctgggaagacagctcccgcgacttgctcgtgtcatccactactgctcaaggttgtgacacgatcgctcgttgcaattgtcagacaggggtgtactactgtaactcaatgagaaaacactatccggttagtttctcaaaacccagtttgatctttgtagaggccagcgagtattacccggccaggtaccagtcacacctcatgctcgcagtaggtcactcggaaccaggggattgcggtggcattcttagatgtcaacacggtgttgtggggttagtctctaccgggggaaacggtctggtggggttcgccgatgtgagggaccttctgtggttggacgatgaggccatggaacagggtgtgtctgattacattaaa-gggcttggcgatgcttttggcatggggtttacagatgcagtatcaagagaggttgaggccttgaaaagtcacttgatcggttcagagggtgccgtggaaaagattcttaagaacttagtcaaactcatttctgcactcgttatcgttatcaggagtgactatgacatggtcactttgactgcaacacttgccctgatcgggtgccacggcagtccttgggcctggatcaagtcgaaaacagcatcgattttgggtataccaatggctcagaagcagagtgcctcttggctaaagaagttcaatgatgcagcgagcgccgccaaggggcttgagtggatctccaacaaaatcagcaaattcatcgattggctcaaggagaagatcattccggccgctaaagagaaagttgagtttctaaacaatttgaagcaacttccc-ttattggagaaccaaatttctaatctcgagcagtcagcagcttcacaagaggatcttgaagcaatgtttggcaacgtgtcctatctggctca---------cttctgtcgcaagttccagccacactatgccacagaagcaaagagggtgtacgccctagaaaagaggatgaacaattacatgcagttcaagagcaaacaccgaattgaacctgtatgcttgattatcagaggttcgcctggtactgggaagtccttagcaacagggattattgctagagctatagcagataaatatcactccagtgtgtattctctacctccggacccagaccattttgatggatacaaacaacaggtcgtcactgttatggacgacctatgccaaaacccggacgggaaagatatgtcactattttgtcagatggtttccacagtggactttataccgcctatggcatctctggaggagaagggagtctcattcacttccaagtttgtgattgcctctactaacgccagtaacattattgtaccaacagtctcagattcagatgccatccgacgtcggttctttatggactgtgatattgaagtgaccgattcctataagacagatttgggcagacttgatgcggggagagcagctaggctgtgctctgagaacaacaccgcaaacttcaaacggtgcagtccactagtttgtgggaaagcaatccagcttagggataggaagtctaaggtgagatacagtgtggacacggtggtgagtgagcttattagggaatacaacaataggtcagctatcgggaatactatcgaagctcttttccaaggaccccctaaattcagaccgataaggatt---agtatggaggagaagcctgcacctgatgctattagtgacctattagctagtgttgatagtgaggaggttcgccaatactgt-agagatcaaggatggattgtgcccgatactcccaccaacgttgagcgccacttgaatagagctgttttgattatgcaatctgtagccactgtggtggctgttgtatcccttgtttacgtcatctacaaattgtttgccggcttccaaggagcatattccggcgcccccaagcaaacactcaagaaaccagtgctgcgcacggcaactgtgcagggaccgagcttggacttcgccctatctctacttagaaggaacattaggcaagtccaaaccgatcagggccacttcacaatgttaggagtgcgagaccacttggctgtgctccccaggcactcccaaccaggaaagaccatctgggttgagcacaagttagtaaagatcgtggatgctgtggagctattagatgaacagggagttaacctagaactcacactggtgacgcttgacatcaatgaaaagttcagagacatcacaaggttcataccagaaacaattagccctgctagtgatgccaccttagttataaatactgaacacatgcccagcatgtttgtgccagttggagatgtggtccagtatggattcctgaaccttagtggcaagcccactcaccggactatgatgtacaatttcccaacaaaggcaggacagtgtggtggtgttgtgactgctgtgggtaaagtgattgggattcacattggtggtaacggtaggcaaggtttctgtgctgccctgaagagaggatacttttgtagcgagcaaggtgagatccaatggatgaaacccaacaaagaaactggtaggttgaacatcaatggacccacacgcaccaaacttgaaccaagtgtctttcatgatgtattcgagggcactaaagagccagcagtgctgactagtaaagacccaaggctagaagttgactttgagcaggctttgttttcaaaatatgtgggaaatacgcttcatgaacccgacgagtttgtcagagaggcggctttacattatgccaaccaactcaaacagctagacatcaagaccaccaagatgagcatggaggatgcttgttacggtacagagaacctggaggctatagacctccacactagtgcagggtatccatatagtgcactaggcattaagaaaagggatattttggacccaataactcgcaatgtcagcaagatgaagttctacatggataagtatgggttggatctaccgtactctacttatgttaaagatgaactcagggccattgacaagattaagaaagggaagtctcgtctcatagaggcgagcagtttgaatgactcagtgtacctgagaatgacattcgggcacctttatgaaacttttcacgccaatccaggtacagtcactggttcagctgtcgggtgcaacccagatgtgttctggagcaagttaccaattctactcccaggatcgctttttgcgttcgactactcagggtatgacgccagcctcagtccagtgtggttcagggcgctagaaatagtcctgcgagagattggttattcagaggatgcagtttctctcatagaggggatcaaccacacccaccatgtgtatcgcaataagacctactgtgttcttggagggatgccctcaggttgttcaggtacttccatctttaactcaatgattaacaatatcatcattagaacacttttgattaaaacattcaaaggaatagatttggatgaactgaatatggtggcctacggggatgatgtgttagctagctacccttttcctattgactgtttggagttggcaaagacaggtaaggagtatggtttaaccatgacgcctgccgacaagtcaccctgtttcaatgaggtcacatgggagaatgccactttcttgaagagaggatttttgcctgattaccaattcccatttttgattcatcccacgatgcctatgagagaaatccatgaatccatccgttggaccaaggacgcacgaaacacccaagatcatgtgcgttccctctgcttgctagcctggcataatgggaaggaagagtatgaaaagtttgtgagcacaattagatctgtcccggttgggaaagcactggctataccgaactttgagaacctgagaagaaattggctcgaattatttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686144.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/94/2012_complete_genome
-------------------------------------------t-acccactcaca-gggcccac-t-gggcgttagcactctggtactaaggtacctttgtgcgcct-g-ttttaac------tccc--tt---cccc-t------aa-a-gtaacttagaag--------------cagtgaactaat-gatcaa-tagtgggcatgacataccagccatgtctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaagagaaaacgttcgttacccggccagctacttcgagaagct-tagtaccatcatgaacgaagtagagcgtttcgctcagca--caa-tccca---gtgtagatcaggctgatgagtcactgca-aaccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctagttctgacatggtgcg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcacccacaaacca-gtggg-cagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaatagggcaattgtt-----taccta----tttatt-gggtttgtaccac-----taacgtt--------------gaagtctgtgatc-acacttgactttatcctgaacctcaatacagtaaaa-----catgggctcacaggtgtccacacaacgctccggctcgcatgaaaactctaactcagctactg-agggttctaccataaattacactaccatcaattattataaagactcctatgccgccacagcaggcaaacagagtcttaagcaggatccagacaagtttgcaaatcctgtcaaggatattttcactgaaatggcagccccactaaaatccccatccgctgaggcatgtggatacagtgatcgagtagcgcagttaactatcggcaactccaccatcactacgcaagaagcagcaaacattatagttgggtatggtgagtggccctcctactgctcggattctgacgctacggcagtggataaaccgacgcgcccagatgtgtcggtgaatagattctacacattggacaccaaattgtgggagaaat------------------cgtccaaaggatggtattggaaattcccggatgtgttaacagaaactggggtctttggtcaaaatgcacaattccactatctttatcggtcagggttctgtattcacgtgcaatgcaatgctagtaaattccaccaaggggcgctcttagttgctgtccttccagagtatgtcattgggacggtggccggaggcacaggaacgg------aggatagtcaccccccttataagcaaacccaacccggcgctgatggctttgagctgcaacacccgtacgtgcttgacgctggtatcccaatatcacaattgacagtgtgcccacatcaatggattaacttgaggactaataattgtgccacaataatagtgccgtacataaacgcactgcccttcgattctgctttgaaccactgcaactttggcctattagtcgtgcccattagcccgttagactttgatcaaggagcaacgccagtgattcctatcaccatcacattggccccaatgtgttctgaatttgcaggtcttaggcaagcggtcacgcagggatttcccaccgagctaaaacctggcacgaaccaatttttaactactgacgacggtgtttcagcgcccattttgccaaactttcaccccactccatgtattcatatacctggtgaagttagaaatttgttagagttgtgtcaggtggaaaccattttagaagtcaataa----------cgtgcccacgaatgccaccagctta------atggagagactgcggtttccggtctcagcccaagcgg------gcaagggtgagttgtgtgcagtgttcagagccgaccctggacggagtgggccatggcagtctactttattgggccagttgtgcgggtactacactcaatggtcaggatcactggaagtcactttcatgtttactgggtcctttatggccactggcaagatgcttatagcctacacaccaccgggaggtcccctgcccaaggaccgggcgaccgccatgttgggtacgcatgtcatttgggatttcggactacaatcgtctgttactcttgtgataccatggattagcaacacccactacagggcgcatgctcgagatggagtgttcgactactatactacaggcttggttagtatatggtatcagacgaattatgtagttccaattggggcacccaacacagcctacataattgcactagcagcagcccagaagaatttcaccatgaagttatgcaaagatgccagtgatatcctgcagacaggcactattcagggagacagg--------gtggcggatgtgattg---aaagttctat--------------------------aggggacagcgtgagcagggccctcactcaagccctaccggca--------cctacaggtcagaacacgcaggtaagcagccaccgactagacaccggtaaagtcccagcacttcaggccgctgagattggagcatcgtcaaatgctagtgatgagagcatgattgagacacggtgtgttcttaattcgcacagcacggctgaaaccactctcgacagcttctttagcagagcggggttggttggagagatagacctccctcttgaaggtacaac-taacccgaatggctatgcaaactgggatatagacataacaggttacgcgcaaatgcgcaggaaggtggagttgttcacttacatgcgctttgacgcagagttcacttttgtcgcgtgcacgcccaccggggaagttgtcccgcagttactccaatatatgtttgtgccaccaggggctcctaagccagattctagagaatcccttgcatggcaaactgccaccaatccctcagtttttgttaagttgtcagatcccccagcacaggtttcagtcccattcatgtcacctgcgagtgcctatcagtggttctatgacggatatcccacattcggtgaacacaagcaagagaaagaccttgaatacggggcatgcccaaacaacatgatgggcacgttctcagtgcggaccgtgggaacctcgaagtccaagtaccctttagttatcagaatttacatgaggatgaagcatgttagggcgtgggtacctcgtccaatgcgcaaccagaactatttattcaaagctaacccaaattatgctggtaa----ttttatcaagccaaccggagccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatctggggctatttacgtgggcaacttcagagtggtcaaccgccatcttgcctctcacaatgattgggcgaaccttgtctgggaagacagttctcgcgacttacttgtgtcatctaccaccgctcaaggttgtgatacgattgcccgttgcaattgtcaaacaggggtgtactattgtaattcgaggaggaagcactatccagtcagtttctcgaaacccagtttgatctttgtagaggccagtgagtattacccagccaggtatcagtcacatcttatgcttgcagttggtcactcagaaccaggagattgcggtggtatacttagatgccaacacggtgtcatagggatagtttccactgggggaaatggcttggtggggttcgctgatgtgagggatctcttgtggttggatgacgaagccatggaacaaggtgtatctgattacattagg-gggcttggtgatgccttcggtatgggattcacagatgctgtgtcaagggaggttgaagctttaaagaaccatttgatcggctcagaaggcgctgtggagaagatcctcaagaacttagtgaaactcatctctgctcttgttattgtcatcaggagtgactacgatatggtcacattgacggcaacacttgccctgatcgggtgtcatgggagcccttgggcctggatcaagtcgaaaacggcgtcaattttgggcataccaatggcccaaaaacagagcgcatcatggttgaagaaattcaacgacgcagcaagcgccgctaagggtcttgagtggatctccaacaaaattagtaagtttatcgattggcttaaagagaaaatcattcctgctgctagagaaaaagtagaatttctaaacaatctaaaacaacttccc-ttactagagaatcaaatttccaatctcgaacagtcagctgcttcacaggaagacctcgaggcgatgtttggcaacgtgtcttacctggccca---------cttttgccgcaaatttcagcctctctatgccacagaagcaaagagagtatatgctctagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcatcagaggctcacctggtactgggaagtctctggcaacagggatcatcgctagagctatagcagacaagtaccactctagtgtgtattccttacctccagacccagatcatttcgacgggtataaacaacagatcgtcacagtaatggacgacctttgtcaaaacccggatgggaaagacatgtcactattttgtcagatggtttccacagtggattttataccgcctatggcgtctctagaagagaagggagtatcgttcacttccaagtttgtaattgcttccactaatgctagcaatatcatagtaccaacagtctcggactcagatgccatccgtcgccgattctttatggattgcgacattgaggtgaccgactcttacaagacagacctgggtaggcttgatgcgggaagggccgctaggttgtgctctgaaaataacaccgcaaatttcaagcgttgcagtccactagtgtgcggaaaggccatccagctcagagataggaaatctaaagtgaggtacagcgtggacacggtggtgtctgagctcatcagagagtacaacaacagatcaaccattggcaacactattgaagctctcttccaagggccccctaaatttaggccgataagaatt---agcttagaagagaaacctgcgcccgacgctattagtgacttactggccagtgtagacagtgaagaagttcgccagtattgc-agggaccaaggatggattgtgccagacactcctaccaatgtggagcgtcatctgggcagggcagttttaattgtgcagtctatagctactgtagtagcagtagtatcccttgtttatgtcatttacaaattgtttgctggcttccagggggcatattccggtgcccccaagcagacacttaagaagccggtactacgtacagctactgtgcagggaccgagcttggactttgctttgtccttacttagaaggaacatcagacaggtccagactgatcagggtcactttaccatgctaggagtgcgagaccacctagctgtactccctagacattcacaaccagggaaaaccatttggattgaacacaagctggtgaggatcgtggatgcagtggagttggtggacgagcaaggagttaacttagaactgacactagtgacgcttgacaccaatgaaaaatttagggacattacaaagtttataccagaaactatcagtccagctaatgacgccaccttggttatcaatactgaacacatgcctagcatgtttgtgccagttggtgatgtggttcaatacgggttcttaaatttaagtggcaagcccactcaccgcactatgatgtacaacttccctacgaaagcagggcagtgcggtggtgttgtgacggcagtgggcaaagtgattgggattcacatcggtggcaacggcaggcagggcttttgtgctgccctcaagagagggtacttctgtagtgaacaaggtgaaattcaatgggtgaagcctaataaggagactggtaggctgaacatcaatggcccaactcgcaccaagttagagccaagcgttttccatgatgtgtttgaaggcaccaaggaaccagcggtattgaccagcaaagatcctagactggaagtggacttcgagcaagctctgttttcaaagtacgtggggaacacgttacacgaacctgatgagttcgttagagaggcagccctacactatgctaaccaactcaagcaattagacataaagactacaaagatgagcatggaagatgcttgctacggcacagaaaatttagaagccatagatctccatacaagtgcaggatatccatacagtgctctaggcatcaagaagagagacatcctggatccaaccactcgtgatatcagcaaaatgaagttctacatggataagtatggtttggacttaccttactccacgtatgtcaaagatgagctcagggctttagataaaattaagaaagggaagtcccgccttatagaagcgagcagtctgaacgactcggtgtacttgaggatggcctttggacacctctatgagacttttcatgccaacccaggcacggttactggctcagctgtcgggtgtaacccagatgtgttctggagtaagctcccaatcctgctcccagggtcactctttgcatttgattactcagggtatgatgccagccttagcccggtgtggtttagagcactagagatagtcctgcgggaagttggttattcagaagatgcagtttctcttatagaaggaattaaccacactcaccacgtgtaccgcaataagacctattgcgtccttgggggaatgccctcaggctgctcaggcacttccatctttaactctatgattaacaatatcattattagaacacttttgattaagacattcaaaggaatagatctggatgagctgaacatggtggcctatggggatgatgtattggctagttaccctttccctatcgattgctcagagctggcgaagacaggcaaggaatatggattgaccatgacacctgccgacaaatcacactgttttaatgaagtcacatgggagaatgccactttccttaagagagggtttttgcctgaccatcaatttccattcttgatccatcctaccatgcctatgagagagatccacgaatccatccgctggaccaaagatgcgcgaaacacgcaagaccacgtgcgttctctctgcttgctagcgtggcacaatggaaaagaagaatacgaaaaatttgtgagcacaattaggtcagttccagttggaaaagcattggccataccaaactttgagaacctgagaagaaattggctcgaattgtttt--ga-acttacagttt-------------------------gcaa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686178.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/17/2011_partial_genome
-------------------------------------------t-acccactcaca-gggcccac-t-gggcgttagcactctggcactaaggtacctttgtgcgcct-g-ttttaac------tccc--tt---cccc-t------ga-a-gtaacttagaag--------------cagtaaactaat-gatcaa-tagtgggcatgacataccagccatgtctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgtggctgaaagagaaaacgttcgtcacccggccagctacttcgagaagct-tagtaccatcatgaacgaagcagagcgtttcgctcagca--caa-tccca---gtgtagatcaggctgatgagtcactgca-aaccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgcg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcacccacaaacca-gtggg-cagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----ttcatt-gggtttgtaccac-----tgacgtt--------------gaagtctgtgacc-acactcaactttatcctgaacctcaatacagtaaaa-----catgggctcacaggtgtccacacaacgctccggctcgcatgaaaactctaactcagctactg-agggttctaccataaactacactaccattaattactataaagactcctatgccgccacagcaggtaaacagagccttaagcaggacccagacaagtttgcaaatcctgttaaggatattttcactgaaatggcagccccactaaaatccccatccgctgaggcatgtggatacagtgatcgagtagcgcagttaactatcggcaactccaccatcactacgcaagaagcagcgaacattatagttgggtatggtgagtggccctcctactgctcggattctgacgccacggcggtggataaaccgacgcgcccagatgtttcggtgaatagattctacacattggacactaaattgtgggagaaat------------------cgtccaaaggatggtattggaaattcccggatgtgttaacagaaactggggtctttggccaaaatgcacaattccactatctctatcggtcagggttctgtattcacgtgcaatgcaatgctagtaaattccaccaaggagcgctcttagttgctgtcctcccagagtatgtaattgggacggtggccggaggcacaggaacgg------aggatagtcaccccccttacaagcaaacccaacccggcgctgatggctttgagctgcaacacccgtacgtgcttgacgctggtatcccaatatcacaattgacagtgtgcccacaccaatggattaacttgaggactaataattgtgccacaataatagtgccgtacataaacgcactgccctttgactctgctctgaaccattgcaactttggcttattggtcgtgcccattagcccgttagactttgatcaaggagcgacgccggtgatccctatcaccatcacattggccccaatgtgttctgaatttgcgggtcttaggcaagcagtcacgcagggatttcccactgagctaaaacctggcacgaaccaatttttgactactgacgacggtgtttcagcgcccattttgccaaactttcaccccactccatgtatccatatacctggtgaagttaggaacctgttagagttgtgtcaggtagaaaccattttagaagtcaataa----------cgtgcccacgaatgccaccagctta------atggagagactgcggtttccggtctcagcccaagcgg------gcaagggtgagttgtgtgcagtgttcagagccgaccctggacggagtgggccatggcagtctactttattgggccagttgtgcgggtactacactcaatggtcaggatcactagaagtcacttttatgtttactgggtcctttatggccactggcaagatgcttatagcctacacaccaccgggaggtcccctacctaaggaccgggcgaccgccatgttgggtacgcatgtcatttgggatttcggactacaatcgtctgttactcttgtgataccatggattagcaacacccactacagggcacatgctcgagatggagtgtttgactactatactacaggcttggtcagtatatggtatcagacgaattatgtagttccaattggggcacccaacacagcctatataattgcattagcagcagcccagaagaatttcaccatgaagttatgcaaagatgccagtgatatcctgcagacaggcactatccagggagacagg--------gtagcggatgtgattg---aaagctctat--------------------------aggggacagcgtgagcagagccctcactcaagccctaccggca--------cctacaggtcagaacacgcaggtaagcagccaccgactagacactggtaaagtcccagcacttcaagccgctgagattggagcatcgtcaaatgctagtgatgagagcatgattgagacacggtgtgttcttaattcgcacagcacggctgaaaccactcttgacagcttctttagcagagcggggttagttggagagatagacctccctcttgaaggtacaac-taacccgaatggttatgcaaactgggatatagacataacaggttatgcgcaaatgcgcaggaaggtggagttgttcacttacatgcgctttgacgcagagttcactttcgtcgcgtgcacgcctactggggaagttgtcccgcagttactccaatatatgtttgtgccaccaggggctcctaagccagattccagagaatcccttgcatggcaaactgccaccaatccctcagtttttgttaagttgtcagatcccccagcacaggtttcagtcccattcatgtcacctgcgagtgcctatcagtggttctatgacggatatcccacattcggtgaacacaagcaagagaaagaccttgaatacggggcatgtccaaacaacatgatgggcacgttctcagtgcggaccgttggaacctcgaagtccaagtaccctttagttattagaatttacatgaggatgaagcatgttagggcgtgggtacctcgtccaatgcgcaaccagaactatttattcaaagctaacccaaattatgctggtaa----ttccatcaagccaaccggtgccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatccggggctatttacgtgggcaacttcagagtggtcaaccgccatcttgcctctcacaatgattgggcgaaccttgtctgggaagatagttctcgtgacttgcttgtgtcatctaccaccgctcaaggctgtgatacgattgcccgttgcaattgtcaaacaggagtgtactattgtaattcaaagaggaagcactacccagtcagtttctcaaaacccagtttgatctttgtagaggccagtgagtattacccagccaggtatcagtcacatcttatgcttgcagttggtcactcagaaccaggagattgcggtggtatacttagatgccaacacggtgtcatagggatagtctccactgggggaaatggcttggtggggtttgctgatgtgagggatcttttgtggttggatgatgaagccatggagcaaggcgtatcagattacattagg-gggcttggtgatgctttcggtatgggattcacggacgcggtgtcaagagaggttgaagctttaaagaaccatttgatcggctcagaaggcgctgtggagaagatcctcaagaacttagtgaaactcatctctgctcttgttattgttatcaggagtgactatgatatggtcacattggcggcaacacttgccctgatcgggtgtcatgggagcccttgggcctggatcaagtcgaaaacggcgtcaattttgggcataccaatggcccaaaaacagagcgcatcatggttgaagaaattcaacgatgcagcaagcgccgctaagggtcttgagtggatctccaacaaaattagtaagtttatcgattggctcaaagagaaaatcatccccgctgctagagaaaaagtagaatttctaaacaacctaaagcaacttccc-ttactggagaatcaaatttccaatctcgaacagtcagctgcttcacaggaagacctcgaagcaatgtttggtaacgtgtcttacctggccca---------tttttgccgcaaattccagcctctctatgccacagaagcaaagagagtgtatgctctagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcatcagaggctcacctggtactgggaagtctctggcaacagggatcatcgctagagctatagcagacaagtatcactctagtgtgtattccttacctccagacccagatcatttcgacgggtacaaacaacagatcgtcacagtaatggacgacctttgccagaacccggatgggaaagacatgtcactattttgtcagatggtttccacagtggatttcataccgcctatggcgtctctagaagaaaagggggtatcgttcacttccaagtttgtaattgcctccactaatgctagtaatatcatagtaccaacagtctcggactcagacgccatccgtcgtcgattctttatggattgcgacattgaggtgaccgactcttacaagacagacctaggcaggcttgatgcgggaagggccgctaggttgtgctctgaaaataacaccgcaaatttcaagcgttgcagtccactagtgtgcggaaaggccatccagctcagagatagaaagtctaaagtgaggtacagcgtggacacggtggtgtctgagctcatcagagagtacaacaacagatcaaccattggcaatactattgaagctctcttccaagggccccctaaatttaggccgataagaatt---agcctagaagagaaacctgcgcccgacgctattagtgacttactggccagtgtagacagtgaagaagttcgccagtattgc-agggaccaaggatggattgtgccagatactcctaccaatgtggaacgtcacctgggcagggcagttttaattgtgcagtctatagctactgtagtagcagtagtatcccttgtctatgtcatttacaagttgttcgctggcttccaaggggcgtattctggtgcccccaaacagacacttaagaagccggtactacgcacagctactgtgcagggaccgagcttggactttgctttgtccttacttagaagaaacatcagacaggtccagactgatcagggtcattttaccatgctaggagtgcgagaccacctagctgtactccccagacattcacaaccagggaaaaccatttggattgaacacaagctggtgaggatcgtggatgccgtggagttggtggacgagcaaggagttaatttagaactgacactagtgacgcttgacaccaatgaaaaatttagggacattacaaagtttataccagagactatcagtccagctagtgacgccaccttggttatcaatactgaacacatgcctagcatgtttgtgccaattggtgatgtggtccaatacgggttcttaaacttaagtggcaagcccactcaccgcactatgatgtacaacttccctacgaaagcaggacagtgcggtggtgttgtgactgcagtaggcaaagtgattgggattcacatcggtggcaacggtaggcaaggcttttgtgctgctctcaagagaggatacttctgtagtgaacagggtgaaatccaatgggtgaagcctaataaggagactggtaggctgaacatcaatggcccaactcgcaccaagttagaaccaagcgttttccatgatgtgtttgaaggcaccaaggaaccagcagtattgtccagcaaagatcctagattggaagtggacttcgagcaagcgctgttttcaaagtatgtggggaacacattatacgaacctgatgagttcgttagagaggcagccctacattatgctaaccaactcaagcaattagacataaagactacaaagatgagcatggaagatgcttgctacggcacagagaatctagaagccatagatctccatacaagtgcaggatatccatacagtgctctaggcatcaagaagagagacatcctggatccagtcactcgtgacgtcagcaaagtgaagttctatatggataagtatggtttggacttgccttactccacatatgtcaaagatgagctcagggctttagataaaattaagaaagggaaatcccgccttatagaagcgagcagtctgaacgactcggtgtatttgaggatggcctttggacatctctatgagacttttcatgccaacccaggtacggtcactggctcagctgtcgggtgtaacccagatgtgttctggagtaagctcccaatcttgctcccagggtcactttttgcatttgattactcagggtatgatgccagccttagcccggtgtggtttagagcactagagatagtcttgcgggaaattggttattcggaagatgcagtttctctcatagaaggaattaaccacactcaccacgtgtatcgcaataagacctattgcgttctcgggggaatgccctcaggctgctcaggcacttccatctttaactctatgattaataatatcatcattagaacacttttgattaagacattcaaaggaataaatctagatgagctgaatatggtggcctatggggatgatgtattggctagttacccttttcctatcgattgctcagagctggcaaagacaggcaaggagtatggattgaccatgacacctgctgacaaatcaccctgttttaatgaagtcacatgggaaaatgccactttccttaagagaggatttttgcctgatcatcaatttccattcttgatccatcccaccatgcctatgagagagatccatgagtccatccgctggaccaaagatgcgcgaaacacgcaagaccacgtgcgttctctctgcttgctagcgtggcataatgggaaagaagaatacgaaaaatttgtgagcacaattaggtcagttccagttggaaaagcattggccataccaaactttgagaatctgagaagaaattggctcgaattgttt-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686230.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/195/2011_complete_genome
-------------------------------------------t-acccactcaca-gggcccac-t-gggcgttagcactctggtactaaggtacctttgtgcgcct-g-ttttaac------tccc--tt---cccc-t------ga-a-gtaacttagaag--------------cagtaaactaat-gatcaa-tagtgggcatgacataccagccatgtctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgtggctgaaagagaaaacgttcgttacccggccagctacttcgagaagct-tagtaccatcatgaacgaagcagagcgtttcgctcagca--caa-tccca---gtgtagatcaggctgatgagtcactgca-aaccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgcg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcacccacaaacca-gtggg-cagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--cttt---attcttatattggctgcttatggtgacaatcaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgct-----taccta----ttcatt-gggtttgtaccac-----tgacgtt--------------gaagtctgtgacc-acactcaactttatcctgaacctcaatacagtaaaa-----catgggctcacaggtgtccacacaacgctccggctcgcatgaaaactctaactcagctactg-agggttctaccataaactacaccaccattaattactataaagactcctatgccgccacagcaggtaaacagagccttaagcaggacccagacaagtttgcaaatcctgttaaggatattttcactgaaatggcagccccactaaaatccccatccgctgaggcatgtggatacagcgatcgagtagcgcagttaactatcggcaactccaccatcactacgcaagaagcagcaaacattatagttgggtatggtgagtggccctcctactgctcggattctgacgctacggcggtggataaaccgacgcgcccagatgtgtcggtgaatagattctacacattggacaccaaattgtgggagaaat------------------cgtccaaaggatggtattggaaattcccggatgtgttaacagaaactggggtctttggccaaaatgcacaattccactatctctatcggtcagggttctgtattcacgtgcaatgcaatgctagtaaattccaccaaggagcgctcttagttgctgtcctcccagagtatgtcattgggacggtggccggaggcacaggaacgg------aggatagtcaccccccttacaagcaaacccaacccggcgctgatggctttgagctgcaacacccgtacgtgcttgatgctggtatcccaatatcacaattgacagtgtgcccacaccaatggattaacttgaggactaataattgtgccacaataatagtgccgtacataaacgcactgccctttgactctgctctgaaccattgcaactttggcttattggtcgtgcccattagcccgttagactttgatcaaggagcgacgccggtgatccctatcaccatcacattggccccaatgtgttctgaatttgcaggtcttaggcaagcagtcacgcagggatttcccactgagctaaaacctggcacgaaccaatttttgactactgacgacggtgtttcagcgcccattttgccaaattttcaccccactccatgtattcacatacctggtgaagttaggaacctgttagagttgtgtcaggtagaaaccattttagaagtcaataa----------cgtgcccacgaatgccaccagctta------atggagagactgcggtttccggtctcagcccaagcgg------gtaagggtgagttgtgtgcagtgttcagagccgatcctggacggagtgggccatggcagtctactttattgggccagttgtgcgggtactacactcaatggtcaggatcactagaagtcacttttatgtttactgggtcctttatggccactggcaagatgcttatagcctacacaccaccgggaggtcccctacctaaggaccgggcgaccgccatgttgggtacgcatgtcatttgggatttcggactacaatcgtctgttactcttgtgataccatggattagcaacacccactacagggcacatgctcgagatggagtgtttgactactatactacaggcttggttagtatatggtatcagacgaattatgtagttccaattggggcacccaacacagcctatataattgcattagcagcagcccagaagaatttcaccatgaagttatgcaaagatgccagtgatatcctgcagacaggcactatccagggagacagg--------gtagcggatgtgattg---aaagctctat--------------------------aggggacagcgtgagcagagccctcactcaagccctaccggca--------cctacaggtcagaacacgcaggtaagcagccaccgactagacactggtaaagtcccagcacttcaagccgctgagattggagcatcgtcaaatgctagtgatgagagcatgattgagacacggtgtgttcttaattcgcacagcacggctgaaaccactcttgacagcttctttagcagagcggggttagttggagagatagacctccctcttgaaggtacaac-taacccgaatggttatgcaaactgggatatagacataacaggttatgcgcaaatgcgcaggaaggtggagttgtttacttacatgcgctttgacgcagagttcactttcgtcgcgtgcacgcctactggggaagttgtcccgcagttactccaatatatgtttgtgccgccaggggctcctaagccagattccagagaatcccttgcatggcaaactgccaccaatccctcagtttttgttaagttgtcagatcccccagcacaggtttcagtcccattcatgtcacctgcgagtgcctatcagtggttctatgacggatatcccacattcggtgaacacaagcaagagaaagaccttgaatacggggcatgtccaaacaacatgatgggcacgttctcagtgcggaccgtcggaacctcgaagtccaagtaccctttagttattagaatttacatgaggatgaagcatgttagggcgtgggtacctcgtccaatgcgcaaccagaactatttattcaaagctaacccaaattatgctggtaa----ttccatcaagccaaccggtgccagtcgcacggcgat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatccggggctatttacgtgggcaacttcagagtggtcaaccgccatcttgcctctcacaatgattgggcgaaccttgtctgggaagatagttctcgtgacttgcttgtgtcatctaccaccgctcaaggttgtgatacgattgcccgttgcaattgtcaaacaggagtgtactattgtaattcaaagaggaagcactacccagttagtttctcaaaacccagtttgatctttgtagaggccagtgagtattacccagccaggtatcagtcacatcttatgcttgcagttggccactcagaaccaggagattgcggtggtatacttagatgccaacacggtgtcatagggatagtctccactgggggaaatggcttggtagggtttgctgatgtgagggatcttttgtggttggatgatgaagccatggagcaaggcgtatcagattacattagg-gggcttggtgatgctttcggtatgggattcacggacgcggtgtcaagagaggttgaagctttaaagaaccatttgatcggttcagaaggcgctgtggagaagatcctcaagaacttagtgaaactcatctctgctcttgttattgtcatcaggagtgactatgatatggtcacattgacggcaacacttgccctgatcgggtgtcatgggagcccttgggcctggatcaagtcgaaaacagcgtcaattttgggcataccaatggcccaaaaacagagcgcatcatggttgaagaaattcaacgatgcagcaagcgccgctaagggtcttgagtggatctccaacaaaattagcaagtttatcgattggctcaaagagaaaatcatccccgctgctagagaaaaagtggaatttctaaacaacctaaagcaacttccc-ttactggagaatcaaatttccaatctcgaacagtcagctgcttcacaggaagacctcgaagcaatgtttggtaacgtgtcttacctggccca---------tttttgccgcaaattccagcctctctatgccacagaagcaaagagagtgtatgctctagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcatcagaggctcacctggtactgggaagtctctggcaacagggatcatcgctagagctatagcagacaagtatcactctagtgtgtattccttacctccagacccagatcatttcgacgggtacaaacaacagatcgtcacagtaatggacgacctttgccagaacccagatgggaaagacatgtcactattttgtcagatggtttccacagtggattttataccgcctatggcgtctctagaagaaaagggggtatcgttcacttccaagtttgtaattgcctccactaatgctagtaatatcatagtaccaacagtctcggactcagacgccatccgtcgtcgattctttatggattgcgacattgaagtgaccgactcttacaagacagacctaggcaggcttgatgcgggaagggccgctaggttgtgctctgaaaataacaccgcaaatttcaagcgttgcagtccactagtgtgcggaaaggccatccagctcagagatagaaagtctaaagtgaggtacagcgtggacacggtggtgtctgagctcatcagagagtacaacaacagatcaaccattggcaacactattgaagctctcttccaagggccccctaaatttaggccgataagaatt---agcctagaagagaaacctgcgcccgacgctattagtgacttactggccagtgtagacagtgaagaagttcgccagtattgc-agggaccaaggatggattgtgccagatactcctaccaatgtggaacgtcatctgggcagggcagttttaattgtgcagtctatagctactgtagtagcagtagtatcccttgtctatgtcatttacaagttgttcgctggcttccaaggggcgtattctggtgcccccaagcagacacttaagaagccggtactacgcacagctactgtgcagggaccgagcttggactttgctttgtccttacttagaagaaacatcagacaggtccagactgatcagggtcattttaccatgctaggggtgcgagaccacctagctgtactccccagacattcacaaccagggaaaaccatttggattgaacacaagctggtgaggatcgtggatgccgtggagttggtggatgagcaaggagttaatttagaactgacactagtgacgcttgacaccaatgaaaaatttagggacattacaaagtttataccagagactatcagtccagctagtgacgccaccttggttatcaataccgaacacatgcctagcatgtttgtgccaattggtgatgtggtccaatacgggttcttaaacttaagtggcaagcccactcaccgcactatgatgtacaacttccctacgaaagcagggcagtgcggtggtgttgtgacagcagtaggcaaagtgattgggattcacatcggtggcaacggtaggcaaggcttttgtgctgctctcaagagaggatacttctgtagtgaacaaggtgaaatccaatgggtgaagcctaataaggagactggtaggctgaacatcaatggcccaactcgcaccaagttagaaccaagcgttttccatgatgtgtttgaaggcaccaaggaaccagcagtattgtccagcaaagatcctagattggaagtggacttcgagcaagcgctgttttcaaagtatgtggggaacacattatacgaacctgatgagttcgttagagaggcagccctacattatgctaaccaactcaagcaattagacataaagactacaaagatgagcatggaagatgcttgctacggcacagagaatctagaagccatagatctccatacaagtgcaggatatccatacagtgctctaggcatcaagaagagagacatcctggatccagtcactcgtgacgtcagcaaaatgaagttctatatggataagtatggtttggacttgccttactccacatatgtcaaagatgagctcagggctttagataaaattaagaaagggaaatcccgccttatagaagcgagcagtctgaacgactcggtgtatttgaggatggcctttggacatctctatgagacttttcatgccaacccaggtacggtcactggctcagctgtcgggtgtaacccggatgtgttctggagtaagctcccaatcttgctcccagggtcactttttgcatttgattactcagggtatgatgccagccttagcccggtgtggtttagagcgctagagatagtcttgcgggaaattggttattcagaagatgcagtttctctcatagaaggaattaaccacactcaccacgtgtatcgcaataagacctattgcgttctcgggggaatgccctcaggctgctcaggcacttccatctttaactctatgattaataatatcatcattagaacacttttgattaagacattcaaaggaatagatctagatgagctgaatatggtggcctatggggatgatgtattggctagttacccttttcctatcgattgctcagagctggcaaagacaggcaaggagtatggattgaccatgacacctgctgacaaatcaccctgttttaatgaagtcacatgggaaaatgccactttccttaagagaggatttttgcctgatcatcaatttccattcttgatccatcccaccatgcctatgagagagatccatgaatccatccgctggaccaaagatgcgcgaaacacgcaagaccacgtgcgttctctctgcctgctagcgtggcataatgggaaagaagaatacgaaaaatttgtgagcacaattaggtcagttccagttggaaaagcattggccataccaaactttgagaatctgagaagaaattggctcgaattgtttt--aa-acttacagttt-------------------------acaa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>EU527983.1_Human_enterovirus_71_isolate_2007-07364_polyprotein_gene_complete_cds
-----------------------------------------g-t-acccactcaca-gggcccac-t-gggcgttagcactctggtactaaggtacctttgtgcgcct-g-ttttaac------tccc--tt---cccc-t------ga-a-gtaacttagaag--------------cagtaaactaat-gatcaa-tagtgggcatgacataccagccatgtctcga-tcaagcacttctg-tttccccggaccgagtatcaataggctgc-tcgcgcggctgaaagagaaaacgttcgttacccggccagctacttcgagaagct-tagtaccatcatgaacgaagcagagcgtttcgctcagca--caa-tccca---gtgtagatcaggctgatgagtcactgca-aaccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgcg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcacccacaaacca-gtggg-cagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-gggtttgtaccac-----taacgtt--------------gaagtctgtgacc-acactcaactttatcctgaacctcaatacagtaaaa-----catgggctcacaggtgtccacacaacgctccggctcgcatgaaaactctaactcagctactg-agggttctaccataaactacactaccatcaattactataaggactcctatgccgccacagcaggcaaacagagccttaagcaggatccagacaagtttgcaaatcctgtcaaagatattttcactgaaatggcagccccactaaaatccccatccgctgaggcatgtggatacagcgatcgagtagcgcagttaactatcggcaactccaccatcactacgcaagaagcagcaaacattatagttgggtatggtgagtggccctcctactgctcggattctgacgctacggcggtggataaaccgacgcgcccagatgtgtcggtgaatagattctacacattggacaccaaattgtgggagaaat------------------cgtccaaaggatggtattggaaattcccggatgtgttaacagaaactggggtctttggccaaaatgcacaattccactatctttatcggtcagggttctgtattcacgtgcaatgcaatgctagtaaattccaccaaggggcgctcttagtcgctgtcctcccagagtatgtcattgggacggtggccggaggcacaggaacgg------aggatagtcaccccccttataagcaaacccaacccggcgctgatggctttgagctgcaacacccgtacgtgcttgacgctggtatcccaatatcacaattgacagtgtgcccacaccaatggattaacttgaggactaataattgtgccacaataatagtgccgtacataaacgcactgcccttcgattctgctttgaaccattgcaactttggcttattggtcgtgcccattagcccgttagactttgatcaaggagcgacgccggtgatccctatcaccatcacattggccccaatgtgttctgaatttgcgggtcttaggcaagcagtcacgcagggatttcccactgagctaaaacctggcacgaaccaatttttaactactgacgacggtgtttcagcgcccattttgccaaactttcaccccactccatgtatccatatacctggtgaagttaggaatctgttagagttgtgtcaggtggaaaccattttagaagtcaataa----------cgtgcccacgaatgccaccagctta------atggagagactgcggtttccggtctcagcccaagcgg------gcaagggtgagttgtgtgcagtgttcagagccgaccctggacggagtgggccatggcagtctactttattgggccagttgtgcgggtactacactcaatggtcaggatcactggaagtcactttcatgtttactgggtcctttatggccactggcaagatgcttatagcctacacaccaccgggaggtcccctacccaaggaccgggcgaccgccatgttgggtacgcatgtcatctgggatttcggactacaatcgtctgttactcttgtgataccatggattagcaacacccactacagggcgcatgctcgagatggagtgttcgactactatactacaggcttggttagtatatggtatcagacgaattatgtagttccaattggggcacccaacacagcctatataattgcactagcggcagcccagaagaatttcaccatgaagttatgcaaagatgccagtgatatcctgcagacaggcactatccagggagacagg--------gtggcggatgtgattg---aaagttctat--------------------------aggggacagcgtgagcagagccctcactcaagccctaccggca--------cctacaggtcagaacacgcaggtaagcagccaccgactagacaccggtaaagtcccagcacttcaagccgctgagattggagcatcgtcaaatgctagtgatgagagcatgattgagacacggtgtgttcttaattcgcacagcacggctgaaaccactctcgacagcttctttagcagagcggggttagttggagagatagacctccctcttgaaggtacaac-taacccgaatggttatgcaaactgggatatagacataacaggttacgcgcaaatgcgcaggaaggtggagttgttcacttacatgcgctttgacgcagagttcactttcgtcgcgtgcacgcctaccggggaagttgtcccgcagttactccaatatatgtttgtgccaccaggggctcccaagccagattctagagaatcccttgcatggcaaactgccaccaatccctcagtttttgttaagttgtcagatcccccagcacaggtttcagtcccattcatgtcacctgcgagtgcctatcagtggttctatgacggatatcccacattcggtgaacacaagcaagagaaagaccttgaatacggggcatgtccaaacaacatgatgggcacgttctcagtgcggaccgtgggaacctcgaagtccaagtaccctttagttattagaatttacatgaggatgaagcatgttagggcgtgggtacctcgtccaatgcgcaaccaaaactatttattcaaagctaacccaaattatgctggtaa----ttctatcaagccaaccggtgccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatctggggctatttacgtgggcaacttcagagtggtcaaccgccatcttgcctctcacaatgattgggcgaaccttgtctgggaagatagttctcgcgacttgcttgtgtcatctaccaccgctcaaggttgtgatacgattgcccgttgcaattgtcaaacaggggtgtactattgtaattcaaagaggaagcactacccagtcagtttctcaaaacccagtttgatctttgtagaggccagtgagtattacccagccaggtatcagtcacatcttttgcttgcagttggtcactcagaaccaggagattgcggtggtatacttagatgtcaacacggtgtcatagggatagtttccactgggggaaatggcttggtggggttcgctgatgtgagggatctcttgtggttggatgacgaagccatggagcaaggtgtatctgattacattagg-gggcttggtgatgccttcggtatgggattcacagacgcggtgtcaagagaggttgaagctctaaagaaccatttgatcggctcagaaggcgctgtggagaagatcctcaagaacttagtgaaactcatctctgctcttgttattgtcatcaggagtgactatgatatggtcacattgacggcaacacttgccctgatcgggtgtcatgggagcccttgggcctggatcaagtcgaaaacggcatcaattttgggcataccaatggcccaaaaacagagcgcatcatggttgaagaaattcaacgacgcagcaagcgccgctaagggtcttgagtggatctccaacaaaattagtaagtttatcgattggcttaaagagaaaatcatccccgctgctagagaaaaagtagaatttctaaacaatctaaagcaacttccc-ttactggagaatcaaatttccaatctcgaacagtcagctgcttcacaggaagacctcgaagcgatgtttggtaacgtgtcttacctggccca---------tttttgccgcaaattccagcctctctatgccacagaagcaaagagagtgtatgctctagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcatcagaggctcacctggtactgggaagtctctggcaacagggattatcgctagagctatagcagacaagtatcactctagtgtgtattccttacctccagacccagatcatttcgacgggtacaaacaacagatcgtcacagtaatggacgacctttgccagaacccggatgggaaagacatgtcactattttgtcagatggtttccacagtggattttataccgcctatggcgtctctagaagaaaagggagtatcgttcacttccaagtttgtaattgcctccactaatgctagtaatatcatagtaccaacagtctcggactcagatgccatccgtcgccgattctttatggattgcgacattgaggtgaccgactcttacaagacagacctgggcagacttgatgcgggaagggccgctaggttgtgctctgaaaataacaccgcaaattttaagcgttgcagtccactagtgtgcggaaaggccatccagctcagagataggaaatctaaagtgaggtacagcgtggacacggtggtgtctgagctcatcagagagtacaacaacagatcaaccattggcaacactattgaagctctcttccaagggccccctaaatttaggccgataagaatt---agcctagaagagaaacctgcgcccgacgctattagtgacttactggccagtgtagacagtgaagaagttcgccagtattgc-agggaccaaggatggattgtgccagatactcctaccaatgtggaacgtcatctgggcagggcagttttaattgtgcagtctatagctactgtagtagcagtagtatcccttgtctatgtcatttacaagttgttcgctggcttccaaggggcgtattctggtgcccccaagcagacacttaagaagccggtactacgcacagctactgtgcagggaccgagcttggactttgctttgtccttacttagaaggaacatcagacaggtccagactgatcagggccattttaccatgctaggagtgcgagaccacctagctgtactccccagacattcacaaccagggaaaaccatttggattgaacacaagctggtgaggatcgtggatgccgtggagttggtggacgagcaaggagttaatttagaactgacactagtgacgcttgacactaatgaaaaatttagggacatcacaaagtttataccagagactatcagtccagctagtgacgccaccttggttatcaatactgaacacatgcctagcatgtttgtgccagttggtgatgtggtccaatacgggttcttaaatttaagtggcaagcccactcaccgcactatgatgtacaacttccctacgaaagcagggcagtgcggtggtgttgtgacagcagtaggcaaagtgattgggattcacatcggtggcaacggcaggcaaggcttttgtgctgctctcaagagaggatacttctgtagtgaacaaggtgaaattcaatgggtgaagcctaataaggagactggtaggctgaacatcaatggcccaactcgcaccaagttagaaccaagcgttttccatgatgtgtttgaaggcaccaaggaaccagcggtattgaccagcaaagatcctagactggaagtggacttcgagcaagctctgttttcaaagtatgtggggaacacattacacgaacctgatgagttcgttagagaggcagccctacattatgctaaccaactcaagcaattagacataaagactacaaagatgagcatggaagatgcttgctacggcacagagaatctagaagccatagatctccatacaagtgcaggatatccatacagtgctctaggcatcaagaagagagacatcctggatccagtcactcgtgatatcagcaaaatgaagttctatatggataagtatggtttggacttgccttactccacatacgtcaaagatgagctcagggctttagataaaattaagaaagggaaatcccgccttatagaagcgagcagtctgaacgactcggtgtatttgaggatggcctttggacatctctatgagacttttcatgccaacccaggtacggtcactggctcagctgtcgggtgtaacccagatgtgttctggagtaagctcccaatcctgctcccagggtcactttttgcatttgattactcagggtatgacgccagccttagcccggtgtggtttagagcactagagatagtcctgcgggaaattggttattcagaagatgcagtttctctcatagaaggaattaaccacactcaccacgtgtatcgcaataagacctattgcattcttgggggaatgccctcaggctgctcaggcacttccatctttaactccatgattaacaatatcatcattagaacacttttgattaagacattcaaaggaatagatctagatgagctgaacatggtggcctatggggatgatgtattggctagttaccctttccctatcgattgctcagagctggcaaaaacaggcaaggagtatggattgaccatgacacctgctgacaaatcaccctgttttaatgaagtcacatgggagaatgccactttccttaagagaggatttttgcctgatcatcaatttccattcttgatccatcccactatgcctatgagagagatccatgaatccatccgctggaccaaagatgcgcgaaacacgcaagaccacgtgcgttctctctgcttgctagcgtggcacaatgggaaagaagaatacgaaaaatttgtgagtacaattaggtcagttccagttggaaaagcattggccataccaaactttgagaatctgagaagaaattggctcgaattgtttt--ga-acttacagttt-------------------------acaa---------------ctgaaccc-caccagaa----atct-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC296444.1_Enterovirus_A71_strain_HCM84-VNM-2011_complete_genome
----------------------------------------ac-c-gagcagtagga-gggcccac-t-gggcgttagcactctggtaccaaggtacctttgtgcgcct-g-ttttaac------tccc--tt---cccc-t------ga-a-gtaacttagaag--------------cagtaaactaat-gatcaa-tagtgggcatgacataccagccatgtctcga-tcaagcacttctg-ttaccccggactgagtatcaataggctgc-tcgcgcggctgaaagagaaaacgttcgttacccggccagctacttcgagaagct-tagtaccatcatgaacgaagcagagcgtttcgctcagca--caa-tccca---gtgtagatcaggctgatgagtcactgca-aaccccatgggcgaccatggcagtgactgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgcg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcacccacaaacca-gtggg-cagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--gttt---attcatatattggctgcttatggtgacaatcaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-gggtttgtaccac-----taacgtt--------------gaagtctgtgacc-acacttaactttatcctgaacctcaatacagtaaaa-----catgggctcacaggtgtccacacaacgctccggctcgcatgaaaactctaattcagctactg-agggttctaccataaactacactaccatcaattactataaagactcctatgccgccacagcaggcaaacagagccttaagcaggatccagacaagtttgcaaatcctgtcaaggatattttcactgaaatggcagccccactaaaatccccatccgctgaggcatgtggatacagcgatcgagtagcgcagttaactatcggcaactccaccatcactacgcaagaagcagcaaacattatagttgggtatggtgagtggccctcctactgctcggattctgacgctacggcggtggataaaccgacgcgcccagatgtgtcggtgaatagattctatacattggacaccaaattgtgggagaaat------------------cgtccaaaggatggtattggaaattcccggatgtgttaacagaaactggggtctttggtcaaaatgcacaattccactatctctatcggtcagggttctgtattcacgtgcaatgtaatgctagtaaattccaccaaggggcgctcttagtagctgtcctcccagagtatgtcattgggacggtggccggaggcacaggaacgg------aggatagtcaccccccttataaacaaacccaacccggcgctgatggctttgagctgcaacacccgtacgtgcttgacgctggtatcccaatatcacaattgacagtgtgcccacatcaatggattaacttgaggactaataattgtgccacaataatagtgccgtacataaacgcactgcccttcgattctgctttgaaccattgcaactttggcctattagtcgtgcccgttagcccgttagactttgatcaaggagcgacgccggtgatccctatcaccatcacattggccccaatgtgttctgaatttgcgggtcttaggcaagcagtcacgcagggatttcccactgagctgaaacctggcacgaaccaatttttaaccactgacgacggtgtttcagcgcccattctgccaaactttcaccccactccatgtattcatatacctggtgaagttagaaatttgttagagttgtgtcaggtggaaaccattttagaagtcaataa----------cgtgcccacgaatgccaccagctta------atggagagactgcggtttccggtctcagcccaagcgg------gcaagggtgagttgtgtgcagtgttcagagccgaccctggacggagtgggccatggcagtctactttgttgggccagttatgcgggtactacactcaatggtcaggatcactggaagtcactttcatgtttactgggtcctttatggccactggcaagatgcttatagcctacacaccaccgggaggtcccctgcccaaggaccgggcgaccgccatgttgggtacgcatgtcatttgggatttcgggctacaatcgtctgttactcttgtgataccatggattagcaacacccactacagggcgcatgctcgagatggagtgttcgactactatactacaggcttggttagtatatggtatcagacgaattatgtggttccaattggggcacccaacacagcctatataattgcactagcagcagcccagaagaattttaccatgaagttgtgcaaagatgccagtgatatcctgcagacaggcactatccagggagacagg--------gtggcggatgtgatcg---aaagttctat--------------------------aggggacagcgtgagcagagccctcactcaagccctaccggca--------cctacaggtcagaacacgcaggtaagcagccaccgactagacaccggtaaagtcccagcacttcaggccgctgagattggagcatcgtcaaatgctagtgatgagagcatgattgagacacgatgtgttcttaattcgcacagcacggctgagaccactctcgacagcttctttagcagagcggggttggttggagagatagacctccctcttgaaggtacaac-taacccgaatggttatgcaaactgggatatagacataacaggttacgcgcaaatgcgcaggaaggtggagttgttcacttacatgcgcttcgacgcagagttcactttcgtcgcgtgcacgcctaccggggaagttgtcccgcagttgctccaatatatgtttgtgccaccaggggctcctaagccagattctagagaatcccttgcatggcaaactgccaccaatccctcagtttttgttaagttgtcagatcccccagcacaggtttcagtcccattcatgtcacctgcgagtgcctatcagtggttctatgacggatatcccacattcggtgaacacaagcaagagaaagacctcgaatacggggcatgcccaaacaacatgatgggcacgttctcagtgcgaaccgtgggaacctcgaagtccaagtatcctttagttattagaatttacatgaggatgaagcatgttagggcgtgggtacctcgtccaatgcgcaaccagaactatttattcaaagctaacccaaattatgctggtaa----ctctatcaagccaaccggtgccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatctggggctatctacgtgggcaacttcagagtggtcaaccgccatcttgcctctcacaatgattgggcgaaccttgtctgggaagatagttctcgcgacttgcttgtgtcatccaccaccgctcaaggttgcgatacgattgcccgttgcaattgtcaaacaggggtgtattattgtaattcaaagaggaagcactacccagtcagtttctcaaaacccagtttgatctttgtaggggccagtgagtattacccagccaggtatcagtcacatcttatgcttgcagttggtcactcagaaccaggagattgcggtggtatacttagatgccaacacggtgtcatagggatagtttccactgggggaaatggcttggtggggttcgctgatgtgagggacctcttgtggttggatgacgaagccatggaacaaggtgtatctgattacattagg-gggcttggtgatgccttcggtatgggattcacagatgcggtgtcaagagaggttgaagctttaaagaaccatttgatcggctcagaaagcgctgtggagaagatcctcaagaacttagtgaaacttatctctgctcttgttattgtcaccaggagtggctatgatatggtcacattgacggcaacgcttgccctgatcgggtgtcatgggagcccttgggcctggatcaagtcgaaaacggcgtcaattttgggcataccaatggcccaaaaacagagcgcatcatggttgaagaaattcaacgacgcagcaagcgccgctaagggtcttgagtggatctccaacaaaattagtaagtttatcgattggctcaaagagaaaatcattcccgctgctagagaaaaagtagaatttctaaacaatctaaagcaacttccc-ttactagagaatcaaatttctaatctcgaacagtcagctgcttcacaggaagacctcgaagcgatgtttggtaacgtgtcttacctggccca---------cttttgccgcaaattccagcctctctatgccacagaagcaaagagagtgtatgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcatcagaggctcacctggtaccgggaagtctctggcaacggggatcatcgctagagctatagcagacaagtaccactctagtgtgtattccttacctccagacccagatcatttcgatgggtacaaacaacagatcgtcacagtaatggacgacctttgtcaaacccgggatgggaaggacatgtcactattttgtcagatggtttccacggtggattttataccgcctatggcgtctttagaagaaaggggagtatcgttcacttccaagtttgtaattgcttccactaatgctagcaatatcatagtaccaacagtctcggactcagatgccatccgtcgccgattctttatggattgtgacattgaggtgaccgactcttacaagacagacctaggtaggcttgatgcgggaagggccgctaggttgtgttcagaaaataacaccgcaaattttaagcgttgcagtccactagtgtgcggaaaggccatccagctcagagataggaaatctaaagtgaggtacagtgtggacacggtggtgtctgagctcatcagagagtacaacaacagatcaaccattggtaacactattgaagctctcttccaagggccccctaaatttaggccgataagaatt---agcttagaagagaaacctgcgcccgacgctattagtgacttactggccagtgtagacagtgaagaagttcgccagtattgc-agggaccaaggatggattgtgccagacactcctaccaatgtggaacgtcatctgggcagggcagttttaattgtacagtctatagctactgtagtagcagtagtatcccttgtctatgtcatttacaaattgtttgctggcttccaaggggcgtattctggtgcccccaagcagacacttaagaagccggtactacgcacagctactgtacagggaccgagcttggactttgctttgtccttacttagaaggaacatcagacaggtccagactgatcagggtcactttaccatgctaggagtgcgagaccacctagctgtactccccagacattcacaaccagggaaaaccatttggattgaacacaagctggtgaggatcgtggatgccgtggagttggtggacgagcaaggagttaacttagaactgacactagtgacgcttgacactaatgaaaaatttagggacattacaaagtttataccagagactattagtccagctagtgacgccaccttggttatcaatactgaacacatgcctagcatgttcgtgccagttggtgatgtggtccaatacgggttcttaaatctaagcggtaagcccactcaccgcactatgatgtataacttccctacgaaagaaagtcaatgcggtggtgttgtgacggcagtaggcaaagggattgggattcagatcggtggcaacggcaggcaaggcttttgtgctgccctcaagagaggatacttctgtagtgaacaaggtgaaattcaatgggtgaagcctaataaggagactgggaggctgaacatcagtgggccaactcgcagcaagttagagccaagcgttttccatgatgtgtttgaaggtaccaaggaaccagcggtattgaccagcaaagatcctagactggaagtggactttgagcaagctctgttttcaaagtatgtggggaacacattacacgaacctgatgagtttgttagagaggcagccctacattatgctaaccaactcaagcaattagacataaagactacaaagatgagcatggaagatgcttgctacggcacagaaaatctagaagccatagatctccatacaagtgcaggatatccatacagtgctctaggcatcaagaagagagacatcctggatccagtcactcgtgatatcagcaaaatgaagttctatatggataagtatggtttggacttgccttactccacatatgttaaagatgagctcagggctttagataaaattaagaaagggaaatcccgccttatagaagcgagcagtttgaacgactcggtgtacttgaggatggcctttggacacctctatgagacttttcatgccaacccaggcacggtcactggctcagctgtcgggtgtaacccagatgtgttctggagtaagctcccaatcctgctcccagggtcactctttgcatttgattactcagggtatgacgccagccttagcccggtgtggtttagagcactagagatagtcctgcgggaagttggttattcagaagatgcagtttctctcatagaaggaattaaccatactcaccatgtgtatcgcaataagacctattgcgttcttgggggaatgccctcaggctgctcaggcacttccatttttaactctatgattaacaatatcattattagaacacttttgattaagacattcaaaggaatagatctggatgagctgaacatggtggcctatggggatgatgtattggctagttaccctttccctattgattgctcagagctggcaaagacaggcaaggagtatggattgaccatgacacctgctgacaaatcaccctgttttaatgaagtcacatgggagaatgccactttccttaagagagggttcttgcctgatcatcaatttccattcttgatccatcctaccatgcctatgagagagatccacgaatccatccgctggaccaaagatgcgcgaaacacgcaagaccacgtgcgttctctctgcttgctagcgtggcacaatgggaaagaagaatacgaaaaatttgtgagcacaattaggtcagttccagttggaaaagcattggccataccaaactttgagaacctgagaagaaattggctcgaattgtttt--ga-acttacagttt-------------------------ataa---------------ctgaacc-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>EF063152.1_Human_enterovirus_71_strain_E2005125-TW_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-t-acccactcaca-gggcccac-t-gggcgtcagcactctggtactgaggtacctttgtgcgcct-g-ttttaac------tccc--tt---cccc-t------ga-a-gtaacttagaag--------------caataaactaac-gatcaa-cagtgggcatgacataccagtcatgtctcga-tcaagcacttctg-tttccccggactgagtatcaataggctgc-tcgcgcggctgaaagagaaaacgttcgttacccggccagctacttcgagaagct-tagtaccatcatgaacgaagcagagcgtttcgctcagca--caa-tccca---gtgtagatcaggctgatgagtcactgcg-acccccatgggcgaccatggcagtggctgcgttggcggcctgcccat--------ggagaaa-tccatgggacgctctaattctgacatggtgcg-aagagcctattgagctagctggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcacccacaaacca-gtggg-cagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaatcaaa-------gagttgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattgtt-----taccta----tttatt-gggtttgtaccac-----taacgtt--------------gaagtctgtgacc-acactcaactttatcctgaacctcaatacagtaaaa-----catgggctcacaggtgtccacacaacgttccggctcgcatgaaaactctaactcagctactg-agggttctactataaactacactaccatcaattactataaggactcctatgccgccacagcaggcaaacagagtcttaaacaggatccagacaagtttgcaaatcctgtcaaagatattttcactgaaatggcagccccactaaaatctccatccgctgaggcatgtgggtacagcgatcgagtagcgcagttaactatcggcaactccaccatcactacgcaagaagcagcaaacattatagttgggtatggtgagtggccctcctactgctcggattctgacgctacggcggtggacaaaccgacgcgcccagatgtgtcggtgaatagattctacacattggacaccaaattgtgggagaaat------------------cgtccaaaggatggtattggaaattcccggatgtgttaacagaaactggggtctttgggcaaaatgcacaattccactatctttatcggtcagggttctgtattcacgtgcaatgcaatgctagtaaatttcaccaaggggcgctcttagtcgctgtcctcccagagtatgtcattgggacggtggctggaggcacaggaacgg------aggatagtcaccccccttataaacaaacccaacccggcgctgatggttttgagctgcaacacccgtacgtgcttgacgctggtatcccgatatctcaattgacagtgtgcccacaccagtggattaacttgaggactaataattgtgccacaataatagtgccgtacataaacgcactgcccttcgattctgctttgaaccattgcaactttggcctgttggtcgtgcctattagcccgttagactttgatcaaggagcgacgccggtaatccctatcaccattacattggccccaatgtgctctgaatttgcgggtcttaggcaagcagtcacgcagggatttcccactgagctaaaacctggcacaaaccaatttttaactactgacgacggtgtttcagcgcccattttgccaaactttcaccccactccatgcatccatatacctggtgaagttaggaatctgttagagttgtgtcaggtggagaccattttagaagttaataa----------cgtgcccacgaatgccactagctta------atggagagactgcggtttccggtctcagcccaagcgg------ggaagggtgagttgtgtgcagtgttcagagccgaccctgggcggagtgggccatggcagtctactttattaggccagttgtgcgggtattacactcaatggtcaggatcactggaagtcactttcatgtttaccgggtcctttatggccactggcaagatgcttatagcctacacaccgccgggaggtcccctacccaaggaccgggcgaccgccatgttgggtacgcatgtcatctgggatttcgggctacaatcgtctgttactcttgtaataccatggattagcaacacccactacagggcgcatgctcgagatggagtgttcgactactatactacaggcttggttagtatatggtatcagacgaattatgtagttccaattggggcacccaacacagcctatataattgcactagcggcggcccagaagaatttcaccatgaagttgtgcaaagatgccagtgacatcctgcagacaggcactatccagggagacagg--------gtggcggacgtgattg---aaagttctat--------------------------aggggacagcgtgagtagagccctcacccaagccctaccggca--------cctacaggccagaacacgcaggtaagcagccacccactagaatgtgggaaagtcccagcacttcaagccgctgagattggagcatcgtcaaatgctagtgatgagagcatgattgagacacggtgtgttcttaattcgcacagcacggctgaaaccactctcgacagcttctttagcagagcggggttagttggagagatagacctccctcttgaaggtaccac-taacccgaatggttatgcaaactgggatatagacataacaggttacgcgcaaatgcgcaggaaggtggagctgttcacttacatgcgctttgacgcagagttcactttcgtcgcatgcacgcctaccggggaagttgtcccacagttactccaatatatgtttgtgccaccaggggctcctaagccagactccagagaatccctcgcatggcaaactgctaccaatccctcagtttttgttaagttgtcagaccccccagcacaggtttcagtcccattcatgtcacctgcgagtgcctatcagtggttctatgacggatatcccacattcggagaacacaagcaagagaaagaccttgaatacggggcatgtccaaacaatatgatgggcacgttctcagtgcggaccgtgggaacctcgaagtccaagtaccctttagttattagaatttacatgaggatgaagcatgtcagggcgtgggtacctcgtccaatgcgcaaccaaaactatttattcaaagctaacccaaattatgctggtaa----ttctattaagccaaccggtgccagtcgcacggcgat---caccac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatctggggctatttacgtgggcaactacagagtggtcaaccgccatcttgcctctcacaatgattgggcaaaccttgtctgggaagacagttctcgcgacttgcttgtgtcatctaccaccgctcaaggttgtgacacgattgcccgttgcaattgtcaaacaggggtgtactattgtaattcaaagagaaagcactacccagtcagtttctcaaaacccagtttgatctttgtagaggccagtgagtattacccagccaggtatcagtcacatcttatgcttgcagttggtcactcagaaccaggagattgcggtggcatacttagatgtcaacacggtgtcatagggatagtttccaccgggggaaatggcttggtggggttcgctgatgtgagggatctcttgtggttggatgatgaagccatggagcaaggtgtatctgattacattagg-gggcttggtgatgccttcggtatgggattcacagatgcggtgtcaagagaggttgaagccttaaagaaccatttgatcggctcggaaggcgccgtggagaagatcctcaagaacttagtgaatatcatctctgctcttgttattgtcatcaggagtgactatgatatggtcacattgacggcaacacttgccctgattgggtgccatgggagcccttgggcctggatcaagtcgaaaacagcatcaatcttgggcataccaatggcccaaaaacagagcgcatcatggctgaagaaattcaacgacgcagcgagcgccgctaagggtcttgagtggatctccaacaaaattagtaagtttatcgattggctcaaagagaaaatcatccctgctgccagagaaaaagtagaatttctaaacaatctaaagcaacttccc-ttactggagaatcaaatttctaatctcgaacagtcagctgcttcgcaggaagacctcgaagcgatgtttggtaacgtgtcttacctggccca---------tttttgccgcaaattccagcctctctatgccacagaagcaaagagagtgtacgctctagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcatcagaggctcacctggtactgggaagtctctagcaacagggattatcgctagagctatagcagataagtatcactctagtgtgtattccttacctccagacccagaccatttcgacgggtacaaacaacagatcgtcacagtaatggatgacctttgccagaacccggatgggaaagacatgtcactattttgccagatggtttctacagtggattttataccgcctatggcgtctctagaagagaagggagtatcgttcacctccaagtttgtgattgcctctactaacgctagtaatatcatagtaccaacagtctcggactcagatgctatccgtcgccgattctttatggattgcgacattgaggtgaccgactcttacaagactgacctgggcaggcttgatgcgggaagggccgctaggttgtgctctgaaaataacaccgcaaattttaaacgttgtagtccactagtgtgtggaaaggccattcagctcagagatagaaaatctaaagtgaggtacagcgtggacacggtggtgtctgaactcatcagagagtacaacaacagatcgaccattggtaacactattgaagctctcttccaagggccccctaaatttaggccgataagaatt---agcctagaagagaaacctgcgcccgacgctattagtgacttactggccagtgtagacagtgaagaagttcgccagtattgc-agggaccaaggatggattgtgccagatactcctaccaatgtggaacgtcatctgggcagagcagttttaattatgcagtccatagctactgtagtagcagtagtatcccttgtctatgtcatttacaagttgttcgctggcttccaaggggcgtattctggtgcccccaagcagacacttaagaaaccggtactacgcacagctactgtgcagggaccgagtttggattttgctttgtccttacttagaaggaacatcagacaggtccagactgatcagggccattttactatgctaggagtgcgagaccacctagctgtactccccagacactcacaaccagggaaaactatttgggttgaacacaagctggtgaggatcgtggatgccgtggagttggtggatgagcaaggagttaatttagaactgacactagtgacacttgacaccaatgaaaaatttagggatattacaaagtttataccagagactattagtcctgctagtgatgccaccttggttatcaacactgaacacatgcctagcatgttcgtgccagttggtgatgtggtccaatacgggttcttaaatctaagcggtaagcccactcaccgcactatgatgtataacttccctacgaaagcagggcagtgcggtggtgttgtgacagcagtaggcaaggtgattgggattcacatcggtggtaacggtaggcaaggcttctgtgctgctctcaagagaggatacttctgtagtgaacaaggtgaaattcaatgggtgaagcctaataaggagactggtaggttgaacatcaatggcccaactcgcaccaagctagaaccaagcgttttccatgatgtgtttgaaggcaccaaggaaccagcggtattgaccagcaaagatcccagactggaagtggacttcgagcaagctctgttttcaaagtatgtggggaacacattacacgaacctgatgaattcgttagagaggcagccctgcattatgctaaccaactcaagcaattagacataaagactacgaagatgagcatggaagatgcttgctacggcacagagaatctagaagccatagatctccatacaagtgcgggatatccgtacagtgctctaggtatcaagaagagagacatcctagatccagtcactcgtgatatcagcaaaatgaagttctatatggataagtatggcttggacttaccttactccacatatgtcaaagatgagctcagggctttagataaaattaagaaagggaaatcccgccttatagaagcaagcagcctgaacgactcggtgtatttgaggatggcctttgggcatctctatgagacttttcatgccaacccaggcacggtcactggctcagctgtcgggtgtaacccagatgtgttctggagtaagctcccaatcctgctcccagggtcactttttgcattcgattactcagggtatgacgccagtcttagcccggtgtggtttagagcactagaaatagtcctgcgggaaattggttattcagaagatgcagtttctctcatagaaggaattaaccacactcaccacgtgtatcgcaataagacctattgcgttcttgggggaatgccctcaggctgctcaggcacttccatctttaactccatgatcaacaatatcatcattagaacacttttgattaagacattcaaaggaatagatctagatgagctgaacatggtggcctatggggatgatgtattggctagttaccctttccctatcgattgctcagagctggcaaaaacaggtaaggagtatggattgaccatgacacctgctgacaagtcaccctgttttaatgaggtcacatgggagaatgccactttccttaagagaggatttttgcctgatcatcaattcccattcttgatccatcccactatgcctatgaaagagatccatgaatccatccgctggaccaaagatgcgcgaaacacgcaagaccacgtgcgttctctttgcttgctagcatggcacaatgggaaagaagaatacgaaaaatttgtgagcacaatcagatcagttccagttggaaaagcattggccataccaaactttgagaatctgagaagaaattggctcgaattgttct--ga-acttacagttt-------------------------gcaa---------------ctgaaccc-caccagag----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaaaa----------------------------------
>JQ280307.1_Human_enterovirus_71_strain_3149_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctacggaaactttgtgcgcct-g-ttttatg------tccc--tc---cccc-t-----aatat-gtaacttagaaat------------ttagtacacccat-gaccaa-tagtaggcgtgacgcaccagtcacgtcttgg-tcaagcacttttg-tttccccgggctgagtatcaatagactgc-ttacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtaacaccatgaaagttgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-aaccccacgggcgaccgtggcagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctgatactgacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacaccctcaaccca-ggggg-cggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctctattatggctgcttatggtgacaattgaa-------gaattgttaccatatagctattggattggccatccgg--tgtttaacagagcaattgta-----taccta----tttgtt-ggatttgtccctt-----tgtcaca--------------cacatctctcaat-accttatactacattataaagttgaatacaggaa-------catgggctcgcaggtgtctacacaacgctccggttcgcatgaaaactcaaattcagctaccg-agggttccactataaattacactaccattaattactataaagactcctatgccgccacagcaggcaaacagagcctcaagcaggatccagataagtttgcaaaccctgttaaagacatctttactgaaatggcagcgccattaaaatctccatctgctgaggcatgtggctatagcgatcgggtggcacaattaactattggtaactctaccatcactacgcaagaagcagcgaacatcatagttggctatggtgagtggccctcctactgctcggactctgacgctacagcggtggacaaaccaacgcgcccagatgtttcggtaaacaggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtactggaagtttccggatgtgttaactgaaaccggggtcttcggccaaaatgcacaattccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagtaaattccatcaaggagcactcctagtcgctgtcctcccagagtatgtcattgggacagtagcaggtggcacagggacgg------aggatagtcaccccccttacaagcaaactcaacccggagctgatggtttcgaattgcaacacccgtacgtgcttgatgctggaattccaatatcacaattaacagtgtgcccacatcaatggattaatttgaggaccaacaattgtgctacaataatagtgccgtacataaatgcactaccctttgattctgccttgaaccattgcaactttggtctactggttgtgcctattagcccgctagactatgatcaaggtgcgacgccagtgatacccattactatcacattggccccaatgtgctctgaatttgcaggccttagacaagcagtcacgcagggatttcctaccgagctgaagcctggcacaaaccaatttttaaccactgatgatggcgtctcagcacccattctgccaaactttcaccccaccccgtgcatccatatacccggtgaggttaggaacttactagagctatgccaggtagagaccattttagaggtcaacaa----------tgtacccacgaatgccactagttta------atggagagattgcgcttcccggtttcagcccaagccg------ggaaaggtgagttatgtgcagtgttcagagctgaccctgggcgaagtggaccatggcagtccaccttgctgggccagttgtgcgggtactatacccaatggtcagggtcgctggaagtcactttcatgttcactgggtcctttatggctaccggtaagatgcttatagcatacacaccaccaggaggccctttgcccaaggaccgggcgaccgccatgttgggtacacacgtcatctgggactttgggctgcaatcgtctgttacccttgtaataccatggattagcaacacccactacagagcgcacgctcgagatggtgtgtttgactactacaccacagggttagttagcatatggtaccaggcgaattacgtggttccaattggggcacccaatacagcctatataatagcattggcggcagcccagaagaatttcactatgaagttgtgcaaggatgctagtgatatcctacaaacaggcactatccagggagacagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagtagagcccttacccaagccctaccagca--------cctacgggccaaaatacgcaggtaagcagtcatcggttagatactggtaaagtcccagcactccaagccgctgaaattggggcatcgtcaaatgctagtgatgagagtatgattaagactcgatgtgttctcaattcacacagcacagctgagactactcttgatagcttctttagcagagcgggattggttggagagatagatctccccctcaagggcacaac-caacccgaatgggtatgcaaactgggacatagatataacaggttatgcgcaaatgcgcagaaaggtggagctgttcacctatatgcgttttgacgcagagttcacctttgtcgcctgcacacctaccggggaggttgtcccgcaattgctccagtatatgtttgtaccacccggagcccccaagccagactccagagaatctctcgcgtggcaaactgccacaaacccctcagtctttgtgaagctgtcagaccccccagcacaggtctcagtcccattcatgtcacctgcgagcgcctatcaatggttttatgacgggtatcccacgtttggtgaacacaagcaggagaaggaccttgaatacggggcttgcccgaacaacatgatgggtacgttctcagtgcgtactgtgggaacttcaaagtccaaatacccattggtgatcaggatttatatgaggatgaagcatgtcagggcgtggataccccgtccaatgcgcaaccaaaactacttgttcaaagccaacccaaattatgctggtaa----ctctattaaaccaactggtgccagtcgcacagcaat---taccac---------------------------------------tctcggg------------------------------------------aaattcgggcagcagtccggggctatctacgtgggcaattttagagtggtcaaccgccatcttgctacacataaagactgggcaaaccttgtttgggaggacagctcccgtgacttgctcgtgtcatctaccaccgcccaaggttgcgacacgattgctcggtgcaattgccagacaggagtgtattattgtaactcaatgagaaagcactatccggtcagtttctcgaaacccagtttggtctttgtagaggccaacgagtactacccggctagatatcaatcacaccttatgcttgcagtgggtcactcggaaccaggagactgcggtggtattctcagatgccaacatggtgtcgtagggatagtttccaccgggggaaacggtctggtggggtttgccgatgtgagggatctcttgtggttggatgacgaggccatggagcagggcgtgactgattacattaaa-ggacttggagatgcttttggcatggggtttacagacgcggtatcaagagaagttgaagcattgaaaaaccacttgatcggttcagagggtgccgtggagaggattcttaagaacttagttaaactcatctctgcgctcgtcattgtcatcaggagtgattatgacatggtcacgttgacggcgacacttgccctgatcgggtgccacggcagtccctgggcctggattaaggctaaaacagcatctattctgggcatacccatcgttcaaaagcagggtgcttcctggctcaagaagtttaacgacatggccaatgccgctaagggtttggagtgggtatccaacaagatcagcaagtttattgattggctcaaggagaaaatcatactagcagctaaggagaaagtagaatttctaaacaacctaaagcagttgcca-ttattggagaatcagatctcgaaccttgaacaatctgcagcatcacaggaagaccttgaagcaatgtttgggaatgtttcctaccttgcaca---------cttttgccgtaagttccaaccactctacgccacagaagctaaaagagtctatgcgctagagaagaggattaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggctcaccaggcacaggtaagtctttggcaactggcataatagcacgagcaatagctgacaagtaccactccagtgtgtactcgctaccaccagacccagatcatttcgatggctacaagcagcaagtggtcacagtcatggacgatctatgccagaatcccgacggcaaggacatgtcactgttttgtcagatggtgtcgactgtggactttatcccaccaatggcttcacttgaagagaaaggagtgtcttttacatctaaattcgtcatcgcatctaccaatgccagtaacatcatagtgccaacggtgtctgattcagacgccattcgccgtaggttctacatggactgtgacattgaggtgacagactcatataaaacagatctgggcagattagacgctgggcgcgccgccaaattatgctctgagaacaacacagctaactttaagcgctgtagccccttagtgtgcgggaaagctatccaactaagggacagaaagtccaaggtgaggtatagtgtggatacagtgatctctgagcttataagggagtataataataggtctactattggtaataccattgaagccctgtttcagggaccactcaaatttaggcctattagaatc---agccttgaagaaaagccagccccagatgctattagtgaccttcttgccagtgtggatagtgaagaggtacgccaatactgt-agagaccagggatggatcatcccagagacccctactaacgttgagaggcatttaaacagggctgtgttggtcatgcaatccatcgccaccgtggtggcggttgtctcgctggtgtatgtcatctacaaactttttgctggattccaaggcgcgtactctggtgctcccaagcaagtacttaagaagcccgttctccgtacagcaactgtacagggtccaagccttgattttgctctgtcactgctaaggagaaatatcagacaagtgcaaacagatcaagggcactttaccatgttgggagttagagatcgcctggccgtccttccccgccactcacaacctggaaaaacgatctgggtagagcataaactcgtgaacgttctggatgctgttgagttagtggacgagcaaggggtcaatttggagctaactctagtcactcttgacaccaatgagaaattcagagacatcactaaattcatcccggagagcatcagcgctgctagtgatgctaccctagtgatcaatacggaacacatgccctcaatgtttgtgccagtgggtgatgttgtgcaatatggattcctgaacctaagcgggaaaccaacccaccgcaccatgatgtacaactttcctactaaagctgggcagtgtggaggggtggtgacatcagtcggaaaggtcatcggtattcacataggtggtaatggtagacagggtttttgtgcagggcttaagagaagctactttgctactgaacagggagaaatccaatgggttaaacccaacaaagaaactggaagactcagcattaatggaccaacccgcactaagcttgagcccagtgttttccatgatgttttcgagggaaacaaagagccagcagtcttgcatagtaaggacccccgcctcgaggtagatttcgaacaagctctatttgctaagtacgtggggaacacgctgcatgaacccgatgagtacatcaaggaggcggccctacactatgcaaatcagttgaaacagctagacatcgacacctctcagatgagcatggatgaggcttgttatggtactgagaaccttgaggccattgacctccataccagtgcaggttacccatatagtgctctaggtataaagaaaagagatattctagatcctaccaccagggatgtgagcaaaatgaaatcttacatggataagtatggtttggatctcccatactccacctatgtcaaggatgagcttcgctcaatagataagatcaagaagggaaaatcccgcttaattgaagcaagtagtctcaatgattcagtgtatctcaggatgacttttgggcacctttatgaggcctttcacgcaaatcctggaactgtcaccggttcagctgtagggtgcaacccggatgtgttctggagcaaactgccaattttgctgcctggctcactcttcgctttcgattactcgggttatgatgccagccttagtcctgtctggtttagggcattggagctagtcctcagagggataggctatagtgaagaggcaatctcgctcattgaagggatcaatcatacgcaccacgtataccgcaacaaaacttactgtgtgcttggtgggatgccctcgggctgctcagggacatctattttcaactcaatgatcaataacatcatcattagggcactacttatcaaaacatttaagggtattgatttggatgaactcaacatggttgcctacggggatgacgtgctagccagttatcctttcccaattgactgtctagaattagcaaaaacaggcaaggagtatggcttgacaatgacccctgcagataaatctccctgcttcaatgaagtcaactggggtaatgcaacctttcttaaaagaggcttcttgcctgacgatcaattccctttcttgatccaccctaccatgccaatgaaagaaattcacgaatctattcgatggaccaaggatgcgcgaaacactcaagatcacgtgcggtccttgtgtctcttggcgtggcacaatggtaagcaagaatatgaaaaattcgtgagcactattagatctgtcccagttgggaaagcattggccattccaaattatgaaaacttgagacgtaattggctcgaattgtttt-----agaggttaaac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta--tacc-a-g-aatagcaaaaaa--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HM622391.1_Human_enterovirus_71_isolate_2008-00643_polyprotein_gene_complete_cds
-------------------------------ct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctacggaaactttgtgcgcct-g-ttttatg------tccc--tc---cccc-t-----aatat-gtaacttagaaat------------ttagtacacccat-gaccaa-tagtaggcgtgacgcaccagtcacgtcttgg-tcaagcacttctg-tctccccgggctgagtatcaatagactgc-ttacgcggttgaaggagaaaacgctcgttacccggctaactacttcgagaaacc-tagtaacaccatgaaagttgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-aaccccacgggcgaccgtggcagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatactgacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacaccctcaaccca-ggggg-cggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctctattatggctgcttatggtgacaattgaa-------gaattgttaccatatagctattggattggccatccgg--tgtttaacagagcaattgta-----taccta----tttgtt-gggtttgtccctt-----tgtcaca--------------cacatctctcaat-accttatactacattataaagttgaatacaggaa-------catgggctcgcaggtgtctacacaacgctccggttcgcatgaaaactcaaattcagctaccg-agggttccactataaattacactaccattaattactataaagactcctatgccgccacagcaggcaaacagagcctcaagcaggatccagataagtttgcaaaccctgttaaagacatctttactgaaatggcagcgccattaaaatctccatctgctgaggcatgtggctatagcgatcgggtggcacaattaactattggtaactctaccatcactacgcaagaagcagcgaacatcatagttggctatggtgagtggccctcctactgctcggactctgacgctacagcggtggacaaaccaacgcgcccagatgtttcggtaaacaggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtactggaagtttccggatgtgttaactgaaaccggggtcttcggccaaaatgcacaattccactacctctatcggtcagggttctgcattcacgtgcagtgcaatgctagtaaattccatcaaggagcactcctagtcgctgtcctcccagagtatgtcattgggacagtagcaggtggcacagggacgg------aggatagtcaccccccttacaagcaaactcagcccggagctgatggtttcgaattgcaacacccgtacgtgcttgatgctggaattccaatatcacaattaacagtgtgcccacatcaatggattaatttgaggaccaacaattgtgctacaataatagtgccgtacataaatgcactaccctttgattctgccttgaaccattgcaactttggtctactggttgtgcctattagcccgctagactatgatcaaggtgcgacgccagtgatacccattactatcacattggccccaatgtgctctgaatttgcaggccttagacaagcagtcacgcaaggatttcctaccgagctgaagcctggcacaaaccaattcttaaccactgatgatggcgtctcagcacccattctgccaaactttcaccccaccccgtgcatccatatacccggtgaggttaggaacttactagagctatgccaggtagagaccattttagaggtcaacaa----------tgtacccacgaatgccactagttta------atggagagattgcgcttcccggtttcagcccaagccg------ggaaaggcgagttatgtgcagtgttcagagctgaccctgggcgaagtggaccatggcagtccaccttgctgggccagttgtgcgggtactatacccaatggtcaggatcgctggaagtcactttcatgttcactgggtcctttatggctaccggtaagatgcttatagcatacacaccaccaggaggccctttgcccaaggaccgggcgaccgccatgttgggtacacacgtcatctgggactttgggctgcaatcgtctgttacccttgtaataccatggattagcaacacccactacagagcgcacgctcgagatggtgtgtttgactactacaccacagggttagttagcatatggtaccagacgaattacgtggttccaattggggcacccaatacagcctatataatagcattggcggcagcccagaagaatttcactatgaagttgtgcaaggatgctagtgatatcctacaaacaggcactatccagggagacagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagtagagcccttacccaagccctaccagca--------cctacgggccaaaatacgcaggtaagcagtcatcggttagatactggtaaagtcccagcactccaagccgctgaaattggggcatcgtcaaatgctagtgatgagagtatgattgagactcgatgtgttctcaattcacacagcacagctgagactactcttgatagcttctttagcagagcgggactggttggagagatagatctccccctcgagggcacaac-caacccgaatgggtatgcaaactgggacatagatataacaggttatgcgcaaatgcgcagaaaggtggagctgttcacctatatgcgttttgacgcagagttcacctttgtcgcctgcacacctaccggggaggttgtcccgcaattgctccagtatatgtttgtaccacccggagcccccaagccagactccagagaatctctcgcgtggcaaactgccacaaacccctcagtctttgtgaagctgtcagaccccccagcacaggtctcagtcccattcatgtcacctgcgagcgcctatcaatggttttatgacgggtatcccacgtttggtgaacacaagcaggagaaggaccttgaatacggggcttgcccgaacaacatgatgggtacgttctcagtgcgtactgtgggaacttcaaagtccaaatacccattggtgatcaggatttatatgaggatgaagcatgtcagggcgtggataccccgtccaatgcgcaaccaaaactatttgttcaaagccaacccaaattatgctggtaa----ctctattaaaccaactggtgccagtcgcacagcaat---taccac---------------------------------------tctcggg------------------------------------------aaattcgggcagcagtccggggctatctacgtgggcaattttagagtggtcaaccgccatcttgctacacataatgactgggcaaaccttgtttgggaggacagctcccgtgacttgctcgtgtcatctaccaccgcccaaggttgcgacacgattgctcggtgcaattgccagacaggagtgtattattgtaactcaatgagaaagcactatccggtcagtttctcgaaacccagtttggtctttgtagaggccagcgagtactacccggctagatatcaatcacaccttatgcttgcagtgggtcactcggaaccaggagactgcggtggtattctcagatgccaacatggtgtcgtagggatagtttccaccgggggagacggtctggtggggtttgccgatgtgagggatctcttgtggttggatgacgaggccatggagcagggcgtgactgattacattaaa-ggacttggagatgcttttggcatggggtttacagacgcggtatcaagagaagttgaagcattgaaaaaccacttgatcggttcagagggtgccgtggagaggattcttaagaacttagttaaactcatctctgcgctcgtcattgtcatcaggagtgattatgacatggtcacgttgacggcgacacttgccctgatcgggtgccacggcagtccctgggcctggattaaggctaaaacagcatctattctgggcatacccatcgttcaaaagcagagtgcttcctggctcaagaagtttaacgacatggccaatgccgctaagggtttggagtgggtatccaacaagatcagcaagtttatcgattggctcaaggagaaaatcataccagcagctaaggagaaagtagaatttctaaacaacctaaagcagttgcca-ttattggagaatcagatctcgaaccttgaacaatctgcagcatcacaggaagaccttgaagcaatgtttgggaatgtttcctaccttgcaca---------cttttgccgtaagttccaaccactctacgccacagaagctaaaagagtctatgcgctagagaagaggattaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggctcaccaggcacaggtaagtctttggcaaccggcataatagcacgagcaatagctgacaaataccactccagtgtgtactcgctaccaccagacccagatcatttcgatggctacaaacagcaagtggtcacagtcatggacgatctatgccagaatcccgacggcaaggacatgtcactgttttgtcagatggtgtcgactgtggactttatcccaccaatggcttcacttgaagagaaaggagtgtcttttacatctaaattcgtcatcgcatctaccaatgccagtaacatcatagtgccaacggtgtctgattcagacgccattcgccgtaggttctacatggactgtgacattgaggtgacagactcatataaaacagatctgggcagattagacgctgggcgcgccgccaaattatgctctgagaacaacacagctaactttaagcgctgtagccccttagtgtgcgggaaagctatccaactaagggacagaaagtccaaggtgaggtatagtgtggatacagtgatctctgagcttataagggagtataataataggtctactattggtaataccattgaagccctgtttcagggaccactcaaatttaggcctattagaatc---agccttgaagaaaagccagccccagatgctattagtgaccttcttgccagtgtggatagtgaagaggtacgccaatactgt-agagaccagggatggatcatcccagagacccctactaacgttgagaggcatttaaacagggctgtgttggtcatgcaatccatcgccaccgtggtggcggttgtctcgctggtgtatgtcatctacaaactttttgctggatttcaaggcgcgtactctggtgctcccaagcaagtacttaagaagcccgttctccgtacagcaactgtacagggtccaagccttgattttgctctgtcactgctaaggagaaatatcagacaagtgcaaacagatcaagggcactttaccatgttgggagttagagatcgcctggccgtccttccccgccactcacaacctggaaaaacgatctgggtagagcataaactcgtgaacgttctggatgctgttgagttagtggacgagcaaggggtcaatttggagctaactctagtcactcttgacaccaatgagaaattcagagacatcactaaattcatcccggagagcatcagcgctgctagtgatgctaccctagtgatcaatacggaacacatgccctcaatgtttgtgccagtgggtgatgttgtgcaatatggattcctgaacctaagcgggaaaccaacccaccgcaccatgatgtacaactttcctactaaagctgggcagtgtggaggggtggtgacatcagtcggaaaggtcatcggtattcacataggtggtaatggtagacagggtttttgtgcagggcttaagagaagctactttgctactgaacagggagaaatccaatgggttaaacccaacaaagaaactggaagactcagcattaatggaccaacccgcactaagcttgagcccagtgttttccatgatgttttcgagggaaacaaagagccagcagtcttgcatagtaaggacccccgcctcgaggtagatttcgaacaagctctatttgctaagtacgtggggaacacgctgcatgaacccgatgagtacatcaaggaggcggccctacactatgcaaatcagttgaaacagctagacatcgacacctctcagatgagcatggatgaggcttgttatggtactgagaaccttgaggccattgacctccataccagtgcaggttacccatatagtgctctagggataaagaaaagagatattctagatcctaccaccagggatgtgagcaaaatgaaattttacatggataagtatggtttggatctcccatactccacctatgtcaaggatgagcttcgctcaatagataagatcaagaagggaaaatcccgcttaattgaagcaagtagtctcaatgattcagtgtatctcaggatgacttttgggcacctttatgaggcctttcacgcaaatcctggaactgtcaccggttcagctgtagggtgcaacccggatgtgttctggagcaaactgccaattttgctgcctggctcactcttcgctttcgattactcgggttatgatgctagccttagtcctgtctggtttagggcattggagctagtcctcagagagataggctatagtgaagaggcaatctcgctcattgaagggatcaatcatacgcaccacgtataccgcaacaaaacttactgtgtgcttggtgggatgccctcgggctgctcagggacatctattttcaactcaatgatcaataacatcatcattagggcactacttatcaaaacatttaagggtattgatttggatgaactcaacatggttgcctacggggatgacgtgctagccagttatcctttcccaattgactgtctagaattagcaaaaacaggcaaggagtatggcttgacaatgacccctgcagataaatctccctgcttcaatgaagtcaactgggataatgcaacctttctcaaaagaggcttcttgcctgacgatcaattccctttcttgattcaccctaccatgccaatgaaagaaattcacgaatctattcgatggaccaaggatgcgcgaaacactcaagatcacgtgcggtccttgtgtctcttggcgtggcacaatggtaagcaagaatatgaaaaatttgtgagcactattagatctgtcccagttgggaaagcattggccattccaaattatgaaaacttgagacgtaattggctcgaattgtttt-----agaggttaaac-------------------------atac---------------ctcaaccc-caccagaa----a--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430818.1_Enterovirus_A71_strain_EVA71/Homosapiens/VNM/12.2/2013_polyprotein_gene_partial_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gatatcaatagactgt-tcacacggtcgaaggagaaagcgttcgttatccggctaactacttcgagaaacc-cagtagcgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctgtaatc-actctcaagtatatattgacccttaatacaattaaa-----catgggctcacaagtgtctacccagcgatccggatctcatgaaaactccaattcagccacag-aaggctccactattaattacaccactattaactactacaaagattcctatgctgcaacagcgggcaaacagagcctcaaacaagaccctgataagttcgctaaccctgtcaaggacatcttcactgaaatggctgcccctctaaagtcaccatctgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattactacgcaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgctccgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaacaggttttatacattggacactaaactatgggagaaat------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcattatttatacagatcagggttttgcatccacgtgcaatgtaacgctagcaagttccaccaaggagcactattggttgctatacttccagaatatgtcatagggacagtagcaggcggcacagggacag------aagacagtcaccccccttacaagcaaacacaaccaggtgccgacggatttgaattgcagcatccgtatgtgctcgatgccgggatccctatatcacaattgacaatatgcccccatcaatggatcaatctgcggaccaataactgtgccacaataatagtaccatatatgaatacattgccttttgactccgccctgaaccattgcaattttgggctgttggtagtgcccattagcccgttggattttgaccaaggggcaaccccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggcttccccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccactccatgcattcacatacccggtgaagtcagaaacctactcgagttgtgtcaagtggagactatacttgaggtcaacaa----------cgtacccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagcgg------ggaaaggtgagttgtgtgctgtgtttagggctgaccctggaagagatggtccatggcagtcaacgatgctaggccagttgtgtggatactacactcagtggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggtaagatgctcatagcttatacacctcctggtggccccttacccaaggaccgggccacagcaatgttgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtcccaattggggcacccaacacagcttacataattgcactggcggcggcccagaagaattttaccatgaaactctgcaaggacactagccacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggccctgccggca--------cccacaggacaaaacacacaggtgagtagccatcgactagacaccggtgaagttccagctctccaagctgctgagattggggcatcatcgaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagactaccctggacagtttcttcagtagagcaggtttggtaggggagatagatctccctttagagggtactac-caacccaaatggttacgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctattcacctatatgcgctttgatgctgagttcacttttgttgcgtgtactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtctttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcaagcgcctaccagtggttttacgacgggtatcccacatttggagaacacaaacaagaaaaagatcttgaatacggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaattacgccggtaa----ctccattaaaccgaccggtactagtcgtaccgctat---tactac---------------------------------------cctcgga------------------------------------------aaattcggtcagcaatctggggccatctacgtgggcaacttcagagtggttaatcgccacctcgctactcataacgactgggcaaacctcgtttgggaagacagctctcgtgacctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgcgattgtcaaacaggagtgtactattgtaactccaagagaaaacactacccagtcagtttttctaaacccagcctcatatacgtggatgctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagtgggccactctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggacttgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttggaacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccacctcataggatctgatggggcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtgattgtaatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaataaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaatttttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtctgctgcctcacaagaagaccttgaagccatgtttgggaatgtgtcatacctcgccca---------tttttgtcgcaaattccaaccattatatgccacagaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtccctcgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtattcacttccaccagaccctgaccattttgatgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggatatgtcattattctgccagatggtgtccactgtggattttatcccaccaatggcttctcttgaagagaagggagtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacattatagtgcctacagtgtctgactctgacgccattcgacgcaggtttttcatggactgcgacattgaagtgacggattcatacaaaacagaattgggtagactagatgctggacgggctgctaagttatgctctgaaaataacactgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaacacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagctccagatgctatcagtgacctcctcgctagtgttgacagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccaccaatgtcgaacgacatctcaacagagcagtgctagttatgcaatccatcgccactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcgggatttcaaggcgcgtattccggggctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtacagggtccaagtctcgactttgctttatccctgctgagaagaaacattaggcaagtccaaacagaccaggggcattttaccatgttaggtgtcagggaccgtttagctgttctcccacggcacgcacagcccgggaagactatttgggtggaacacaaacttgtgaacgtccttgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtgacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtggagctagtgatgcaactttggtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttttgtgctggtttgaagaggagttactttgcaagtacacagggtgagatccaatgggtgaagcccaataaagaaactggtaggctgaacatcaatggaccaactcacactaagctggagcctagtgtgtttcatgatgtgtttgaaggcaataaggaaccagcggtcctaacaagtaaagaccctagactggaggtcgactttgagcaggccctgttttccaagtatgtgggcaatgttttgcatgagcctgatgaatacgtgacacaagctgccctccactacgcgaatcaactaaagcagctggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggnnnnnnnnnnnnnnnnnnngctctgcagatatccttacagcgcccttggcatcaggaaaagagacattctcaaccccgtaactagggatgtgtctaagatgaaactctatatggacaagtacgggttagacctgccatactccacctacgtgaaggatgagcttagatctctggataaaatcaagaaagggaagtcacgcctgatagaggctagtagcttaaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctactgcctggagcactctttgcctttgactactcagggtatgatgctagcctcagcccggtatggttcagggccttagaaattgtgttacgggaaattgggtatccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtacttggtggaatgccctcagggtgctctggtacttncatctttaactcaatgatcaacaacatcattattagaacccttctaataaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgacgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtttgactatgacacctgctgacaaatcaccttgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagactaccaattcccgttcttaattcaccctacgatgcccatgaaga------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686176.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/168/2012_complete_genome
-------------------------------------------c-acccactcaca-ggacccac-g-cggtgctagcactctggttctacggaacctttgtgcgcct-g-ttttacg---t--cccc---t----ccc-c-----aattt-gtaacctagaagc------------aatttacaacact-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacctctg-tttccccggaccgagtatcaatagactgt-tcacacggtcgaaggagaaagcgttcgttatccggctaactacttcgagaaacc-cagtagcgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctgtaatc-actctcaagtatatattgacccttaatacaattaaa-----catgggctcacaagtgtctacccagcgatccggatctcatgaaaactccaattcagccacag-aaggctccactattaattacaccactattaactactacaaagattcctatgctgcaacagcgggcaaacagagcctcaaacaagaccctgataagttcgctaaccctgtcaaggacatcttcactgaaatggctgcccctctaaagtcaccatctgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattactacgcaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgctccgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaacaggttttatacattggacactaaactatgggagaaat------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcattatttatacagatcagggttttgcatccacgtgcaatgtaacgctagcaagttccaccaaggagcactattggttgctatacttccagaatatgtcatagggacagtagcaggcggcacagggacag------aagacagtcaccccccttacaagcaaacacaaccaggtgccgacggatttgaattgcagcatccgtatgtgctcgatgccgggatccctatatcacaattgacaatatgcccccatcaatggatcaatctgcggaccaataactgtgccacaataatagtaccatatatgaatacattgccttttgactccgccctgaaccattgcaattttgggctgttggtagtgcccattagcccgttggattttgaccaaggggcaaccccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggcttccccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccactccatgcattcacatacccggtgaagtcagaaacctactcgagttgtgtcaagtggagactatacttgaggtcaacaa----------cgtacccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagcgg------ggaaaggtgagttgtgtgctgtgtttagggctgaccctggaagagatggtccatggcagtcaacgatgctaggccagttgtgtggatactacactcagtggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggtaagatgctcatagcttatacacctcctggtggccccttacccaaggaccgggccacagcaatgttgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtcccaattggggcacccaacacagcttacataattgcactggcggcggcccagaagaattttaccatgaaactctgcaaggacactagccacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggccctgccggca--------cccacaggacaaaacacacaggtgagtagccatcgactagacaccggtgaagttccagctctccaagctgctgagattggggcatcatcgaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagactaccctggacagtttcttcagtagagcaggtttggtaggggagatagatctccctttagagggtactac-caacccaaatggttacgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctattcacctatatgcgctttgatgctgagttcacttttgttgcgtgtactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtctttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcaagcgcctaccagtggttttacgacgggtatcccacatttggagaacacaaacaagaaaaagatcttgaatacggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaattacgccggtaa----ctccattaaaccgaccggtactagtcgtaccgctat---tactac---------------------------------------cctcgga------------------------------------------aaattcggtcagcaatctggggccatctacgtgggcaacttcagagtggttaatcgccacctcgctactcataacgactgggcaaacctcgtttgggaagacagctctcgtgacctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgcgattgtcaaacaggagtgtactattgtaactccaagagaaaacactacccagtcagtttttctaaacccagcctcatatacgtggatgctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagtgggccactctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggacttgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttggaacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccacctcataggatctgatggggcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtgattgtaatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaataaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaatttttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtctgctgcctcacaagaagaccttgaagccatgtttgggaatgtgtcatacctcgccca---------tttttgtcgcaaattccaaccattatatgccacagaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtccctcgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtattcacttccaccagaccctgaccattttgatgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggatatgtcattattctgccagatggtgtccactgtggattttatcccaccaatggcttctcttgaagagaagggagtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacattatagtgcctacagtgtctgactctgacgccattcgacgcaggtttttcatggactgcgacattgaagtgacggattcatacaaaacagaattgggtagactagatgctggacgggctgctaagttatgctctgaaaataacactgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaacacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagctccagatgctatcagtgacctcctcgctagtgttgacagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccaccaatgtcgaacgacatctcaacagagcagtgctagttatgcaatccatcgccactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcgggatttcaaggcgcgtattccggggctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtacagggtccaagtctcgactttgctttatccctgctgagaagaaacattaggcaagtccaaacagaccaggggcattttaccatgttaggtgtcagggaccgtttagctgttctcccacggcacgcacagcccgggaagactatttgggtggaacacaaacttgtgaacgtccttgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtgacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtggagctagtgatgcaactttggtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttttgtgctggtttgaagaggagttactttgcaagtacacagggtgagatccaatgggtgaagcccaataaagaaactggtaggctgaacatcaatggaccaactcacactaagctggagcctagtgtgtttcatgatgtgtttgaaggcaataaggaaccagcggtcctaacaagtaaagaccctagactggaggtcgactttgagcaggccctgttttccaagtatgtgggcaatgttttgcatgagcctgatgaatacgtgacacaagctgccctccactacgcgaatcaactaaagcagctggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatacagcgcccttggcatcaggaaaagagacattctcaaccccgtaactagggatgtgtctaagatgaaactctatatggacaagtacgggttagacctgccatactccacctacgtgaaggatgagcttagatctctggataaaatcaagaaagggaagtcacgcctgatagaggctagtagcttaaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctactgcctggagcactctttgcctttgactactcagggtatgatgctagcctcagcccggtatggttcagggccttagaaattgtgttacgggaaattgggtatccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtacttggtggaatgccctcagggtgctctggtacttccatctttaactcaatgatcaacaacatcattattagaacccttctaataaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgacgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtttgactatgacacctgctgacaaatcaccttgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagactaccaattcccgttcttaattcaccctacgatgcccatgagagagatccatgagtccattcggtggactaaagacgcacgcaatacccaagatcacgtgcgctccctgtgtctgttggcatggcataacggcaaggatgaatatgagaaatttgtgagcgcaattagatcagtcccagttggaaaagcgttggccattcctaactttgagaatctgagaagaaattggctcgagttatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----gtctggt------c-g-----tgttaat-g-acta--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF974790.1_Enterovirus_A71_isolate_M538-TW12_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-t-acccactcaca-ggacccac-g-cggtgctagcactctggttccgcggaacctttgtgcgcct-g-ttttacg---t--cccc---t----ccc-t-----aattt-gtaacttagaagc------------aatttacagcact-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacctctg-tttccccggaccgagtatcaatagactgt-tcacacggtcgaaggagaaagcgttcgttatccggctaactacttcgagaaacc-cagtagcgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctgtaatc-actctcgagtatatattgacccttaatacaattaaa-----catgggctcacaagtgtctacccagcgatccggatctcatgaaaactccaattcagccacag-aaggctccactattaattacaccactattaactactacaaagattcctatgctgcaacagcgggcaaacagagcctcaaacaagaccctgataagttcgctaaccctgtcaaggacatcttcactgaaatggctgcccctctaaagtcaccatctgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattactacgcaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgctccgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaacaggttttatacattggacactaaactatgggagaaat------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcattatttatacagatcagggttttgcatccacgtgcaatgtaacgctagcaagttccaccaaggagcgctattggttgctatacttccagaatatgtcatagggacagtagcaggcggcacagggacag------aagacagtcaccccccttacaagcaaacacaaccaggtgccgacggatttgaattgcagcatccgtatgtgctcgatgccgggatccctatatcacaattgacaatatgcccccatcaatggatcaacctgcggaccaataactgtgccacaataatagtaccatatatgaatacattgccttttgactccgccctgaaccattgcaattttgggctgctggtagtgcccattagcccgttggattttgaccaaggggcaaccccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggcttccccactgaaccaaagccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccactccatgcattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactatacttgaggtcaacaa----------cgtacccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagcgg------ggaaaggtgagttgtgtgctgtgtttagggctgaccctggaagagatggtccatggcagtcaacgatgctaggccagttgtgtggatattacactcagtggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggtaagatgctcatagcttatacacctcctggtggccccttacccaaggaccgggccacagcaatgttgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgagatggggtgtttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtcccaattggggcacccaacacagcttacataattgcactggcggcggcccagaagaattttaccatgaaactctgcaaggacaccagtcatatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggccctgccggca--------cccacaggacaaaacacacaggtgagcagccatcgactagataccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagactaccctggacagtttcttcagcagagcaggtttggtaggggagatagatctccctttagagggtactac-caacccaaatggttacgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctattcacctatatgcgctttgatgctgagttcacttttgttgcgtgtactcctactggtcaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtctttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacatttggagaacacaaacaagaaaaagatcttgaatacggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaattacgccggtaa----ctccattaaaccgaccggcactagtcgtaccgctat---tactac---------------------------------------cctcgga------------------------------------------aagttcggtcagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataacgactgggcaaacctcgtttgggaagacagctctcgtgacctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgcgattgtcaaacaggagtgtactattgtaactccaagagaaaacactacccagtcagtttttctaaacccagcctcatatacgtggatgctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagtgggccactctgagcctggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggacttgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttggaacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccaccttataggatctgatggggcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtgattgtaatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaataaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaatttttaaccaacttgaagcaattacca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaagaccttgaagccatgtttgggaatgtgtcatacctcgccca---------tttttgtcgcaaattccaaccattatatgccacagaagctaagcgggtctatgttctagagaagagaatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtccctcgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtattcacttccaccagaccctgaccattttgacgggtacaaacagcaggtggttacagttatggatgatctgtgtcagaaccccgacggcaaggatatgtcattattctgccagatggtgtccactgtggattttatcccaccaatggcttctcttgaagagaagggagtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacattatagtgcctacagtgtctgactctgacgccattcgacgcaggttttacatggactgcgacattgaagtgacggattcatacaaaacagaattgggtagactagatgctggacgggctgctaagttgtgctctgaaaataacactgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagctccagatgctattagtgacctcctcgctagtgttgacagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccaccaatgttgaacgacatctcaacagagcagtgctagttatgcaatccatcgccactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcgggatttcaaggcgcgtattctggggctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtacagggtccaagtctcgactttgctttatccctgctgagaagaaacattaggcaagtccaaacagaccaggggcattttaccatgttaggtgtcagggaccgtttagctgttctcccacggcacgcacagcccgggaagactatttgggtggaacacaaacttgtgaacgtccttgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtgacactagataccaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtggagctagtgatgcaactttagtgatcaatacagaacatatgccatcaatgtttgtcccagtaggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgtggaggtgtggtcacatcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttttgtgctggtttgaagaggagttactttgcaagtacacagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcacactaagctggagcctagtgtgtttcatgatgtgtttgaaggcaataaggaaccagcggtcctaacaagtaaagaccctagactggaggtcgactttgagcaggccctgttttccaagtatgtgggcaatgttttgcatgagcctgatgaatacgtgacacaagctgccctccactacgcgaaccaacttaaacagctagacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatacagcgcccttggcatcaggaaaagagacattctcaaccccgtaactagggatgtgtctaagatgaaactctatatggacaagtacgggttagatctgccatactccacctacgtgaaggatgagcttagatctctggataaaatcaagaaagggaagtcacgcttgatagaggctagtagcttaaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctactgcctggagcactctttgcctttgactactcagggtatgatgctagcctcagcccggtatggttcagggccttagaaattgtgttacgggaaattgggtatccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtacttggtggaatgccctcagggtgctctggtacttccatctttaactcaatgatcaacaacatcattattagaacccttctaataaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgacgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtttgactatgacacctgcagacaaatcaccttgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagactaccaattcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcggtggactaaagacgcacgcaatacccaagatcacgtgcgctccctgtgtctgttggcatggcataacggcaaggatgaatatgagaaatttgtgagcacaattagatcagtcccagttggaaaagcgttggccattcctaactttgagaatctgagaagaaattggctcgaattatttt--aa-cagtacagttt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF134486.1_Enterovirus_A71_isolate_A2011125_complete_genome
-------------------------------ct-gtgggttg-t-tcccactcaca-ggacccac-g-cggtgctagcactctggttccacggaacctttgtgcgcct-g-ttttacg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttacagcact-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacctctg-tttccccggaccgagtatcaatagactgt-tcacacggtcgaaggagaaagcgttcgttatccggctaactacttcgagaaacc-cagtagcgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctgtaatc-actctcgagtatatattgacccttaatacaattaaa-----catgggctcacaagtgtctacccagcgatccggatctcatgaaaactccaattcagccacag-aaggctccactattaattacaccactattaactactacaaagattcctatgctgcaacagcgggcaaacagagcctcaaacaagaccctgataagttcgctaaccctgtcaaggacatcttcactgaaatggctgcccctctaaagtcaccatctgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattactacgcaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgctccgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaacaggttttatacattggacactaaactatgggagaaat------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcattatttatacagatcagggttttgcatccacgtgcaatgtaacgctagcaagttccaccaaggagcgctattggttgctatacttccagaatatgtcatagggacagtagcaggcggcacagggacag------aagacagtcaccccccttacaagcaaacacaaccaggtgccgacggatttgaattgcagcatccgtatgtgctcgatgccgggatccctatatcacaattgacaatatgccctcatcaatggatcaacctgcggaccaataactgtgccacaataatagtaccatatattaatacattgccttttgactccgccctgaaccattgcaattttggcctgctggtagtgcccattagcccgttggattttgaccaaggggcaaccccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggcttccccactgaaccaaagccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccactccatgcattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactatacttgaggtcaacaa----------cgtacccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagcgg------ggaaaggtgagttgtgtgctgtgtttagggctgaccctggaagagatggtccatggcagtcaacgatgctaggccagttgtgtggatactacactcagtggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggtaagatgctcatagcttatacacctcctggtggccccttacccaaggaccgggctacagcaatgttgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtcccaattggggcacccaacacagcttacataattgcactggcggcggcccagaagaattttaccatgaaactctgcaaggacactggtcatatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggccctgccggca--------cccacaggacaaaacacacaggtgagcagccatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagactaccctggacagtttcttcagcagagcaggtttggtaggggagatagatctccctttagagggtactac-caacccaaatggttacgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctattcacctatatgcgctttgatgctgagttcacttttgttgcgtgtactcctactggtcaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtctttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacatttggagaacacaaacaagaaaaagatcttgaatacggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaattacgccggtaa----ctccattaaaccgaccggtactagtcgtaccgctat---tactac---------------------------------------cctcgga------------------------------------------aagttcggtcagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataacgactgggcaaacctcgtttgggaagacagctctcgtgacctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgcgattgtcaaacaggagtgtactattgtaactccaagagaaaacactacccagtcagtttttctaaacccagcctcatatacgtggatgctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagtgggccactctgagcctggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggacttgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttggaacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccaccttataggatctgatggggcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtgattgtaatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaataaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaatttttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaagaccttgaagccatgtttgggaatgtgtcatacctcgccca---------tttttgtcgcaaattccaaccattatatgccacagaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtccctcgcgaccggcatcattgctcgggccatagcagataaatatcactctagtgtgtattcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggatatgtcattattctgccagatggtgtccactgtggatttcatcccaccaatggcttctcttgaagagaagggagtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacattatagtgcctacagtgtctgactctgacgccattcgacgcaggttttacatggactgcgacattgaagtgacggattcatacaaaacagaattgggtagactagatgctggacgggctgctaagttatgctctgaaaataacactgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagctccagatgctattagtgacctcctcgctagtgttgacagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccaccaatgttgaacgacatctcaacagagcagtgctagttatgcaatccatcgccactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcaggatttcaaggcgcgtattctggggctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtacagggcccaagtcttgactttgctttatccctgctgagaagaaacattaggcaagtccaaacagaccaggggcattttaccatgttaggtgtcagggaccgtttagctgttctcccacggcacgcacagcccgggaaggctatttgggtggaacacaaacttgtgaacgtccttgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtgacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtggagctagtgatgcaactttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttttgtgctggtctgaagaggagttactttgcaagtacacagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcacactaagctggagcctagtgtgtttcatgatgtgtttgaaggcagtaaggaaccagcggtcctaacaagtaaagaccctagactggaggtcgactttgagcaggccctgttttccaagtatgtgggcaatgttttgcatgagcctgatgaatacgtgacacaagctgccctccactacgcgaaccaacttaaacagctggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatacagcgcccttggcatcaggaaaagagacattctcaaccccgtaactagggatgtgtctaagatgaaactctatatggacaagtacgggttagatctgccatactccacctacgtgaaggatgagcttagatctctggataaaatcaagaaagggaagtcacgcctgatagaggctagtagcttaaatgactctgtctacctcagaatgacttttgggcacctttacgaggtgtttcatgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctactgcctggagcactctttgcctttgactactcagggtatgatgctagcctcagcccggtatggttcagggccttagaaattgtgttacgggaaattgggtatccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacatctaccggaacaaaacatactgtgtacttggtggaatgccctcagggtgctctggtacttccatctttaactcaatgatcaacaacatcattattagaacccttctaataaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggagacgacgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtttgactatgacacctgcagacaaatcaccttgcttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagactaccaattcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcggtggactaaagacgcacgcaatacccaagatcacgtgcgctccctgtgtctgttggcatggcataacggcaaggatgaatatgagaaatttgtgagcacaattagatcagtcccagttggaaaagcgttggccattcctaactttgagaatctgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctga--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF154354.2_Enterovirus_A71_strain_B5-03172-TW-2011_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccactcaca-ggacccac-g-cggtgctagcactctggttccacggagcctttgtgcgcct-g-ttttacg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttacagcact-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacctctg-tttccccggaccgagtatcaatagactgt-tcacacggtcgaaggagaaagcgttcgttatccggctaactacttcgagaaacc-cagtagcgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctgtaatc-actctcgagtatatattgacccttaatacaattaaa-----catgggctcacaagtgtctacccagcgatccggatctcatgaaaactccaattcagccacag-aaggctccactattaattacaccactattaactactacaaagattcctatgctgcaacagcgggcaaacagagcctcaaacaagaccctgataagttcgctaaccctgtcaaggacatcttcactgaaatggctgcccctctaaagtcaccatctgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattactacgcaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgctccgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaacaggttttatacattggacactaaactatgggagaaat------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcgcagtttcattatttatacagatcagggttttgcatccacgtgcaatgtaacgctagcaagttccaccaaggagcgctattggttgctatacttccagaatatgtcatagggacagtagcaggcggcacagggacag------aagacagtcaccccccttacaagcaaacacaaccaggtgccgacggatttgaattgcagcatccgtatgtgctcgatgccgggatccctatatcacaattgacaatatgcccccatcaatggatcaacctgcggaccaataactgtgccacaataatagtaccatatatgaacacattgccttttgactccgccctgaaccattgcaattttgggctgctggtagtgcccattagcccgttggattttgaccaaggggcaaccccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggcttccccactgaaccaaagccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccactccatgcattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactatacttgaggtcaacaa----------cgtacccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagcgg------ggaaaggtgagttgtgtgctgtgtttagggctgaccctggaagagatggtccatggcagtcaacgatgctaggccagttgtgtgggtactacactcagtggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggtaagatgctcatagcttatacacctcctggtggccccttacccaaggaccgggccacagcaatgttgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtcccaattggggcacccaacacagcttacataattgcactggcggcggcccagaagaattttaccatgaaactctgcaaggacactagtcatatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggccctgccggca--------cccacaggacaaaacacacaggtgagcagccatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagactaccctggacagtttcttcagcagagcaggtttggtaggggagatagatctccctttagagggtactac-caacccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctattcacctatatgcgctttgatgctgagttcacttttgttgcgtgtactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtctttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacatttggagaacacaaacaagaaaaagatcttgaatacggagcgtgtcctaacaacatgatgggcactttttcggtgcggaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcgtggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaattacgccggtaa----ctccattaaaccgaccggtactagtcgtaccgctat---tactac---------------------------------------cctcgga------------------------------------------aagttcggtcagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataacgactgggcaaacctcgtttgggaagacagctctcgtgacctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgcgattgtcaaacaggagtgtactattgtaactccaagagaaaacactacccagtcagtttttctaaacccagcctcatatacgtggatgctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagtgggccactctgagcctggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggacttgttggttttgctgatgtgagggacctcttgtggctagatgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttggaacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccaccttataggatctgatggggcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtgattgtaatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaataaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaatttttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaagaccttgaagccatgtttgggaatgtgtcatacctcgccca---------tttttgtcgcaaattccaaccattatatgccacagaagctaagcgggtctacgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtccctcgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtattcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggatatgtcattattctgccagatggtgtccactgtggattttatcccaccaatggcttctcttgaagagaagggagtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacattatagtgcctacagtgtctgactctgacgccattcgacgcaggttttacatggactgcgacattgaagtgacggattcatacaaaacagaattgggtagactagatgctggacgggctgctaagttatgctctgaaaataacactgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagctccagatgctattagtgacctcctcgctagtgttgacagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccaccaatgttgaacgacatctcaacagagcagtgctagttatgcaatccatcgccactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcgggatttcaaggcgcgtattctggggctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtacagggtccaagtctcgactttgctttatccctgctgagaagaaacattaggcaagtccaaacagaccaggggcattttaccatgttaggtgtcagggaccgtttagctgttctcccacggcacgcacagcccgggaagactatttgggtggaacacaaacttgtgaacgtccttgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtgacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtggagctagtgatgcaactttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttttgtgctggtttgaagaggagttactttgcaagtacacagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcacactaagctggagcctagtgtgtttcatgatgtgtttgaaggcaataaggaaccagcggtcctaacaagtaaagaccctagactggaggtcgactttgagcaggccctgttttccaagtatgtgggcaatgttttgcatgagcctgatgaatacgtgacacaagctgccctccactacgcgaaccaacttaaacagctggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatacagcgcccttggcatcaggaaaagagacattctcaaccccgtaactagggatgtgtctaagatgaaactctatatggacaagtacgggttagatctgccatactccacctacgtgaaggatgagcttagatctctggataaaatcaagaaagggaagtcacgcctgatagaggctagtagcttaaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctactgcctggagcactctttgcctttgactactcagggtatgatgctagcctcagcccggtatggttcagggccttagaaattgtgttacgggaaattgggtatccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtacttggtggaatgccctcagggtgctctggtacttccatctttaactcaatgatcaacaacatcattattagaacccttctaataaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgacgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtttgactatgacacctgcagacaaatcaccttgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagactaccaattcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcggtggactaaagacgcacgcaacacccaagatcacgtgcgctccctgtgtctgttggcgtggcataacggcaaggatgaatatgagaaatttgtgagcacaattagatcagtcccagttggaaaagcgttggccattcctaactttgagaatctgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-ttgcatga----gccgtga------c-acaagctgccctc-c-acta--------cgcgaaccaactt---------------a-aacagctggaca-----------------------------------------------------------------------------ta-------------------------------------------------------------------------------------------------------------------------------------------
>JN964686.1_Human_enterovirus_71_strain_EV71/Xiamen/2009_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-ggacccac-g-tggtgctagcactctggttccacggaacctttgtgcgcct-g-ttttacg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttacaacact-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacttccg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-atccccacgggcgaccgtgacagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctgcaacc-actctcgagtatatattgacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacgatccggctctcatgaaaactccaactcagccacag-aaggctccactattaattacaccactattaactactacaaagattcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacatcttcactgaaatggctgcccccctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccattggaaactccaccattactacacaggaagcgacaaacatcatagtcggttatggtgaatggccctcatactgctccgatgacgacgccacagcggtggacaagccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaaat------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggagtctttggccaaaacgcgcagtttcactatttatacagatcagggttttgcatccacgtgcaatgtaacgctagcaagttccaccaaggagcgctgttggtcgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgcttgatgccgggatccctatatcacaattgacaatatgcccccatcaatggatcaacctgcggaccaataactgtgccacaataatagtaccatatatgaatacattgccttttgactccgccctgaaccattgcaattttgggctgctggtagtgcccattagcccattggattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatatgctctgagtttgctggtctcagacaggcagtcactcaaggcttccccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccactccatgcatccatatacccggtgaagtcaggaacctgctcgagttgtgccaagtggagactattcttgaggtcaacaa----------cgtacccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcacaagcgg------ggaaaggtgaattgtgtgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcagtggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggtaagatgctcatagcttatacacctcctggtggccctttacccaaagaccgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtgataccatggattagtaatacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagtatctggtatcaaacaaattacgtggtcccaattggggcacccaacacagcttacataattgcactggcggcggctcagaagaattttaccatgaaactgtgcaaggacactagccacatattacaaacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacgatgcgtcctcaactcacacagtacagcagagactaccctggacagtttcttcagcagagcaggtttggtaggagagatagatctccctctaaagggtactac-caacccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcactttcgttgcgtgtactcctactggcgaggttgttccgcaactactccaatatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcatacagccacaaacccttcagtttttgtcaagttaactgaccctccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccgcgtttggagagcacaaacaagagaaagatcttgaatacggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgtaaccaaaactacttgttcaaagccaacccaaattacgccggtaa----ctccattaaaccgaccggtactagtcgtaccgctat---cactac---------------------------------------ccttgga------------------------------------------aagtttggtcagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataacgactgggctaacctcgtttgggaagacagctcccgtgacttgttagtgtcgtccacccccgcccagggctgtgatacaattgcacgttgtgattgtcaaacgggagtgtactattgtaactttaagagaaaacactatccagtcagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccctgctagataccaatcgcacctgatgcttgcagtgggccactctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaatcctaaagaacctcattaagctgatttcagcgttagtgattgtaatcaggagtgattatgatatggttactctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcattcctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaatttttaaccaacttgaagcaattgcca-ctgttagaaaaccagatcacaaatttggaacagtccgctgcctcacaagaagaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattatatgccacagaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggcatcatagctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccatttcgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggatatgtcattattctgccagatggtgtccaccgtggattttatcccaccaatggcttctcttgaagaaaagggagtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacattatagtgcctacagtgtctgactctgacgccatccgacgcaggttttacatggactgcgacattgaagtgacggattcatacaaaacagacttgggtagactagatgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaggccagccccagatgctattagtgacctcctcgctagtgttgacagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccaccaatgttgaacgacatctcaacagagcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtacagggtccaagtctcgactttgctttatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttcttccacggcacgcacaacctgggaagactatttgggtggaacacaaacttgtgaacgtccttgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtgacactggacaccaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtggagctagtgatgcaactttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtacgggttcctgaacctcagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgtggaggtgtggtcacatcagtcggcaagattgttggtattcacattggcggtaacgggcgccaggggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagctggagcctagtgtgtttcatgatgtgtttgacggcaataaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgattttgagcaagctctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcgaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatacagcgcccttggcatcaagaaaagagacattctcaaccccgtaactagggatgtgtctaagatgaaattctatatggacaaatacgggttagatctgccatactccacctacgtgaaggatgagcttagatctctggataaaatcaagaaagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagatgtgttttggagtaagctgccgatcctactgcctggggcactctttgcctttgactactcagggtatgatgctagcctcagcccggtatggttcagggccttagaagttgtgttgcgggaaattgggtatccagaggaggccgtgtccctcgtagaaggaattaaccacactcaccacgtctaccggaacaaaacatactgtgtacttggtggaatgccctcagggtgctctggtacttccatctttaactcaatgatcaacaacatcattattagaacccttctaataaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgacgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtttgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccaattcccattcttatttcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcacgcaatacccaagatcacgtgcgctccctgtgtctgttggcatggcataacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcctaactttgagaatttgagaagcaattggctcgagttattttaaaa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aa-------------------------------------------------------------------------------------------------------------------------------
>KT354866.1_Enterovirus_A71_isolate_N1745-TW08\VP1-D164E_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-ggacccac-g-tggtgctagcactctggttctacggaacctttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttacaacact-gatcaa-tagcaggcatggcgcgccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcgccattgaagctgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atcctcacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcga-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttataccac-----taacctt--------------aaaatctgcaacc-actctcgagtatatattaaccctcaatacaatcaaa-----catgggctcacaggtgtctacccaacgatccggctcccatgaaaactccaactcagccacag-aaggctccactattaattacaccactattaactattacaaagattcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtctccatccgctgaagcttgtggttacagtgatcgcgtagcacaactcaccatcggaaactccaccattactacacaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgctccgatgacgacgctacagcggtggataagccaacgcgcccagatgtttccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagttccctgatgtactgactgagaccggagtctttggccaaaacgcacagtttcactatttatatagatcagggttttgtatccatgtgcaatgtaacgctagcaagttccaccaaggagcgctgttagtcgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aggacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgctgggatccctatatcacaattgacaatatgcccccatcaatggatcaacctgcggaccaataactgtgccacaataatagtgccatatatgaatacattgccttttgactccgccctgaaccattgcaattttgggctgctggtagtgcccattagcccattggattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggctttcccactgagccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccactccgtgtattcacatacccggtgaagtcagaaacctgcttgagttgtgtcaagtggagactattcttgaggtcaacaa----------tgtacccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagcag------ggaaaggtgaattgtgtgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatattacactcaatggtccgggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggtaagatgctcatagcttatacacctcctggtggccctttacccaaggaccgggctacagcaatgctgggcacacatgttatctgggactttgggctacaatcatctgtcacccttgtgataccatggatcagtaatacccactacagggcgcatgcccgagatggggtctttgattactataccacgggactggtcagtatctggtatcaaacaaattacgtggtcccaataggggcacccaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtagcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggcccttccggca--------cccacaggacaaaacacacaggtgagcagccatcgattagacactggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagactaccctggacagttttttcagcagagcaggtttggtaggagagatagacctccctctaaagggtaccac-caatccaaatggctatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggaattcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccagagtctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatatggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtatcctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaattacgccggtaa----ctccattaaaccgaccggtactagtcgtaccgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataatgactgggcaaacctcgtttgggaagacagctcccgtgacctattagtgtcgtctaccaccgcccagggctgtgacataattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaaaagaaagcactatccagtcagcttttctaaacccagcctcatatacgtggatgctagcgagtattaccctgctagatatcaatcgcacctgatgctcgcagcgggccattctgagcccggcgactgcggaggcatcttaagatgccaacatggtgtagttggtatagtgtccacaggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtgattgtgatcaggagcgattatgatatggttacccttacagccactttagccctgattggttgccatggtagtccttgggcttggatcaaagccaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgtcccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgccg-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggatatgtcattattttgccagatggtgtccaccgtggattttatcccaccaatggcttctcttgaagaaaagggagtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtgtctgactctaacgccatccgacgcaggtttttcatggattgcgacattgaggtgacggattcatacaaaacagacttgggtagattagatgctggacgggctgctaagttatgctctgaaaacaacaccgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagtgatctcctcgctagtgtagacagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccactaatgttgaacgacatcttaacagagcagtactagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacatcaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcccgggaagactatttgggtggagcacaaacttgtgaacgtcctcgacgcagttgagctggtggatgagcagggcgttaacttggaactcacactggtgacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtgccgctagtgatgcaactttagtgatcaatacagagcatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgcggaggtgtggtcacatcagtcggtaagattgttggtattcacatcggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaacaaagaaactggtaggctgaacatcaatgggccaactcgcactaagctggagcctagtgtatttcatgatgtgtttgaaggcaataaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcgaaccaacttaaacagttggacataaacactagcaagatgagcatggaagaagcgtgctatggcactgagaacctggaagcaatagacctctgtactagtgctggatatccatacagcgcccttggcatcaagaaaagagacattctcaaccccgtaactagggatgtgtctaagatgaaattctatatggacaaatacgggctagatctgccatactccacctacgtgaaggatgaacttagatctctggataaaatcaagaaagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacctttgggcacctctacgaggtatttcacgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctgctgcctgggtcactctttgcctttgattactcagggtatgatgctagcctcagcccggtatggtttagggccttagaagttgtgttacgggaaattgggtatccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtgtaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatcttcaactcaatgatcaacaacatcattattagaaccctcctaataaaaacctttaagggaatagacctcgatgagttgaacatggtggcctatggggacgacgtgttggctagttatccctttcccatcgattgtcttgagttggctaagactggtaaggagtatggtttgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccaattcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcacgcaatacccaagaccacgtgcgctccctgtgtctgttggcatggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggctattcctaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaaaaa----------aaaaaaaaaaaaaaaaa----aa
>KF974780.1_Enterovirus_A71_isolate_M448-TW08_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-ggacccac-g-tggtgctagcactctggttctacggaacccttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttacaacact-gatcaa-tagcaggcatggcgcgccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttacccggctaactacttcgagaaacc-cagtagcgccattgaagctgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atcctcacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcga-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttataccac-----taacctt--------------aaaatctgtaacc-actctcgagtatatattaaccctcaatacaatcaaa-----catgggctcacaggtgtctacccaacgatccggttcccatgaaaactccaactcagccacag-aaggctccactattaattacaccactattaactattacaaacattcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtctccatccgctgaagcttgtggttacagtgatcgcgtagcacaactcaccatcggaaactccaccattactacacaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgctccgatgacgacgctacagcagtggataagccaacgcgcccagatgtttccgtgaataggttttatacattggacactaaattgtgggaaaaat------------------catccaaggggtggtattggaagttccctgatgtactgactgagaccggagtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcatccatgtgcaatgtaacgctagcaagttccaccaaggagcgctgttagtcgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aggacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgctgggatccctatatcacaattgacaatatgcccccatcaatggatcaacctgcggaccaataactgtgccacaataatagtgccatatatgaatacattgccttttgactctgccctgaaccattgcaattttgggctgctggtagtgcccattagcccattggattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggctttcccactgagccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccactccgtgtattcacatacccggtgaagtcagaaacctgcttgagttgtgtcaagtggagactattcttgaggtcaacaa----------tgtacccactaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcaatggtccgggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggtaagatgctcatagcttatacacctcctggtggccctttacccaaggaccgggctacagcaatgctgggcacacatgttatctgggactttgggctacaatcatctgtcacccttgtgataccatggatcagtaatacccactacagggcgcatgcccgagatggggtctttgattactacaccacgggactggtcagtatctggtatcaaacaaattacgtggtcccaataggggcacccaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtagcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggcccttccggca--------cccacaggacaaaacacacaggtgagcagccatcgattagacactggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagactaccctggacagttttttcagcagagcgggtttggtaggagagatagacctccctctagagggtaccac-caatccaaatggctatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggaattcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccagattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccgccacaggtctcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatatggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtatcctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaattacgccggtaa----ctccattaaaccgaccggtactagtcgtaccgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataatgactgggcaaacctcgtttgggaagacagctcccgtgacctattagtgtcgtctaccaccgcccagggctgtgacataattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaaaagaaagcactatccagtcagcttttctaaacccagcctcatatacgtggatgctagcgagtattaccctgctagatatcaatcgcacctgatgctcgcagcgggccattctgagcccggcgactgcggaggcatcttaagatgccaacatggtgtagttggtatagtgtccacaggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggaacaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtgattgtgatcaggagcgattatgatatggttacccttacagccactttagccctgattggttgccatggtagtccttgggcttggatcaaagccaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgtcccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgccg-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggatatgtcattattttgccagatggtgtccaccgtagattttatcccaccaatggcttctcttgaagaaaagggagtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtgtctgactctgacgccatccgacgcaggtttttcatggattgcgacattgaggtgacggattcatacaaaacagacttgggtagattggatgctggacgggctgctaagttatgctctgaaaacaacaccgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagtgatctcctcgctagtgtagacagcgaggaagtgcgccaatactgt-agggagcagggctggatcatccctgaaactcccactaatgttgaacgacatcttaacagagcagtattagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacatcaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacaacccgggaagactatttgggtggagcacaaacttgtgaacgtcctcgacgcagttgagctggtggatgagcagggcgttaacttggaactcacactagtgacactagacaccaatgaaaaatttagagatgttaccaagttcattccagagaccattagtgccgctagtgatgcaactttagtgatcaatacagagcatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgcggaggtgtggtcacatcagtcggtaagattgttggtattcacatcggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaacaaagaaactggtaggctgaacatcaatgggccaactcgcactaagctggagcctagtgtatttcatgatgtgtttgaaggcaataaggaaccagcggtcttaacaagcaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcgaaccaacttaaacagttggacataaacactagcaagatgagcatggaagaagcgtgctatggcactgagaacctggaagcaatagacctctgtactagtgctggatatccatacagcgcccttggcatcaagaagagagacattctcaaccccgtaactagggatgtgtctaagatgaaattctatatggacaaatacgggctagatctgccatactccacctacgtgaaggatgaacttagatctctggataaaatcaagaaagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacctttgggcacctctacgaggtatttcacgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctactgcctgggtcactctttgcctttgattactcagggtatgatgctagcctcagcccggtatggtttagggccttagaagttgtgttacgggaaattgggtatccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtgtaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatcttcaactcaatgatcaacaacatcattattagaaccctcctaataaaaacctttaagggaatagacctcgatgagttgaacatggtggcctatggggacgacgtgttggctagttatccctttcccattgattgtcttgagttggctaagactggtaaggagtatggtttgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccaattcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcacgcaacacccaagaccacgtgcgctccctgtgtctgttggcatggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggctattcctaattttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>EU527985.1_Human_enterovirus_71_isolate_2007-08747_polyprotein_gene_complete_cds
---------------------------------------------------------------------------agcactctggttctacggaacctttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttacaacact-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcgccattgaagctgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atcctcacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcga-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttataccac-----taacctt--------------aaaatctgtaacc-actctcgagtatatattaaccctcaatacaatcaaa-----catgggctcacaggtgtctacccaacgatccggctcccatgaaaactccaactcagccacag-aaggctccactattaattacaccactattaactattacaaagattcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctttaaagtctccatccgctgaagcttgtggttacagtgatcgcgtagcacaactcaccatcggaaactccaccattactacacaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgctccgatgacgacgctacagcggtggataagccaacgcgcccagatgtttccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagttccctgatgtactgactgagaccggagtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcatccatgtgcaatgtaacgctagcaagttccaccaaggagcgctgttagtcgctatacttccagaatatgtcataggaacagtggcaggcggcacaggaacag------aggacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgctgggatccctatatcacaattgacaatatgcccccatcaatggatcaacctgcggaccaataactgtgccacaataatagtgccatatatgaatacattgccttttgactccgccctgaaccattgcaattttgggctgctggtagtgcccattagcccattggattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggctttcccactgagccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccactccgtgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------tgtacccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcaatggtccgggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggtaagatgctcatagcttatacacctcctggtggccccttacccaaggaccgggctacagcaatgctgggcacacatgttatctgggactttgggctacaatcatctgtcacccttgtgataccatggatcagtaatacccactacagggcgcatgcccgagatggggtgtttgattactataccacgggactggtcagtatctggtatcaaacaaattacgtggtcccaataggggcacccaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggcccttccggca--------cccacaggacaaaacacacaggtgagcagccatcgattagacactggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagactaccctggacagttttttcagcagagcaggtttggtaggagagatagacctccctctagagggtaccac-caatccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggaattcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccagattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatatggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtatcctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaattacgccggtaa----ctccattaaaccgaccggtactagtcgtaccgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataatgactgggcaaacctcgtttgggaagacagctcccgtgacctattagtgtcgtctaccaccgcccagggctgtgacataattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaaaagaaagcactatccagtcagcttttctaaacccagcctcatatacgtggatgctagcgagtattaccctgctagatatcaatcgcacctgatgctcgcagcgggccattctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtgtccacaggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtgattgtgatcaggagcgattatgatatggttaccctcacagccactttagccctgattggttgccatggtagtccttgggcttggatcaaagccaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgtcccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgccg-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggatatgtcattattttgccagatggtgtccaccgtggattttatcccaccaatggcttctcttgaagaaaagggagtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtgtctgactctgacgccatccgacgcaggtttttcatggattgcgacattgaggtgacggattcatacaaaacagacttgggtagattagatgctggacgggctgctaagttatgctctgaaaacaacaccgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggcaatacaattgaagcactattccaaggcccgcccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagtgatctcctcgctagtgtagacagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccactaatgttgaacgacatcttaacagagcagtactagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacatcaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcccgggaagactatttgggtggagcacaaacttgtgaacgtcctcgacgcagttgagctggtggatgagcagggcgttaacttggaactcacactggtgacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtgccgctagtgatgcaactttagtgatcaatacagagcatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgcggaggtgtggtcacatcagtcggtaagattgttggtattcacatcggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaacaaagaaactggtaggctgaacatcaatggaccaactcgcactaagctggagcctagtgtatttcatgatgtgtttgaaggcaataaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcgaaccaacttaaacagttggacataaacactagcaagatgagcatggaagaagcgtgctatggcactgagaacctggaagcaatagacctctgtactagtgctggatatccatacagcgcccttggcatcaagaaaagagacattctcaaccccgcaactagggatgtgtctaagatgaaattctatatggacaaatacgggctagatctgccatactccacctacgtgaaggatgaacttagatctctggataaaatcaagaaagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacctttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctactgcctgggtcactctttgcctttgattactcagggtatgatgctagcctcagcccggtatggtttagggccttagaagttgtgttacgggaaattgggtatccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtgtaccggaacaaaacatactgtgtacttggtggaatgccctcagggtgttctggtacttccatcttcaactcaatgatcaacaacatcattattagaaccctcctaataaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgacgtgttggctagttatccctttcctatcgattgtcttgagttggctaagactggtaaggagtatggtttgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccaattcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcacgcaatacccaagaccacgtgcgctccctgtgtctgttggcatggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggctattcctaattttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgt---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF974787.1_Enterovirus_A71_isolate_M1644-TW08_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-ggacccac-g-tggtgctagcactctggttctacggaacctttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttacaacact-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctagctacttcgagaaacc-cagtagcgccattgaagctgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atcctcacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcga-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacactggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----tacctg----tttgtt-ggctttataccac-----taacctt--------------aaaatctgtaacc-actctcgagtatatattaaccctcaatacaatcaaa-----catgggctcacaggtgtctacccaacgatccggctcccatgaaaactccaactcagccacag-aaggctccactattaattacaccactattaactattacaaagattcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgttaaggacattttcactgaaatggctgcccctctaaagtctccatccgctgaagcttgtggttacagtgatcgcgtagcacaactcaccatcggaaactccaccattactacacaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgctccgacgacgacgctacagcggtggataagccaacgcgcccagatgtttccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagttccctgatgtactgactgagaccggagtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcatccatgtgcaatgtaacgctagcaagttccaccaaggagcgctgttagtcgctatacttccagaatatgtcatagggacagtggcaggtggcacaggaacag------aggacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgagttgcagcacccgtatgtgctcgatgctgggatccctatatcacaattgacaatatgcccccatcaatggatcaacctgcggaccaataactgtgccacaataatagtgccatatatgaatacattgccttttgactccgccctgaaccattgcaattttgggctgctggtagtgcccattagcccattggattttgatcaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggctttcccactgagccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccactccgtgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------tgtacccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcaatggtccgggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggtaagatgctcatagcttatacacctcctggtggccccttacccaaggaccgggctacagcaatgctgggcacacatgttatctgggactttgggctacaatcatctgtcacccttgtgataccatggatcagtaatacccactacagggcgcatgcccgagatggggtgtttgattactataccacgggactggtcagtatctggtatcaaacaaattacgtggtcccaataggggcacccaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggcccttccggcg--------cccacaggacaaaacacacaggtgagcagccatcgattagacactggtgaggttccagcgctccaagctgctgagatcggggcatcatcgaacactagtgatgagagcatgattgagacacgatgcgtccttaactcacacagtacagcagagactactctggacagttttttcagcagagcaggtttggtaggagagatagacctccctctagagggtaccac-caatccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggaattcactttcgttgcgtgcactcctactggtggggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccagattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatatggagcgtgtcctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtatcctttggttgtcagaatatatatgagaatgaaacatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaattacgccggtaa----ctccattaaaccgaccggtaccagtcgtaccgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataatgactgggcaaacctcgtttgggaagacagctcccgtgacctattagtgtcgtctaccaccgcccagggctgtgacataattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaaaagaaagcactatccagtcagcttttctaaacccagcctcatatacgtggatgctagcgagtattaccctgctagatatcaatcgcacctgatgctcgcagcgggccattctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtgtccacaggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtgattgtgatcaggagcgattatgatatggttactctcacagccactttagccctgattggttgccatggtagtccttgggcttggatcaaagccaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcatggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgtcccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgccg-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctcaccaggcactgggaagtctcttgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggatatgtcattattttgccagatggtgtccaccgtggattttatcccaccaatggcttctcttgaagaaaagggagtttcttttatatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtgtctgactctgacgccatccgacgcaggttcttcatggattgcgacattgaggtgacggattcatacaaaacagacttgggtagattagatgctggacgggctgctaagttgtgctctgaaaacaacaccgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtctaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggcaatacaattgaagcactattccaaggcccgcccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagtgatctcctcgctagtgtagacagcgaggaagtgcgccaatactgt-agggagcaaggttggatcattcctgaaactcccactaatgttgaacgacatcttaacagagcagtactagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacatcaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcccgggaagactatttgggtggagcataaacttgtgaacgtcctcgacgcagttgagctggtggatgagcagggcgttaacttggaactcacactggtgacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtgccgctagtgatgcaactttagtgatcaatacagagcacatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtgggaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgcggaggtgtggtcacatcagtcggtaagattgttggtattcacatcggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaacaaagaaactggtaggctgaacatcaatggaccaactcgcactaagctggagcctagtgtatttcatgatgtgtttgaaggcaataaggaaccagcggtcttaacaagtaaagaccctagattggaggccgactttgagcaagccctgttttccaagtatgtgggcaatgttttatatgagcctgatgagtacgtgacacaagctgccctccactatgcgaaccaacttaaacagttggacataaacactagcaagatgagcatggaagaagcgtgctatggcactgagaacctggaagcaatagacctctgtactagcgctggatatccatacagcgcccttggcatcaagaaaagagacattctcaaccccgtaactagggatgtgtctaagatgaaatcctatatggacaaatacgggctagatctgccatactccacctacgtgaaggatgaacttagatctctggataaaatcaagaaagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacctttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctactgcctgggtcactctttgcctttgattactcagggtatgatgctagcctcagcccggtatggtttagggccttagaagttgtgttacgggaaattgggtacccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtgtaccggaacaaaacatactgtgtacttggtggaatgccctcagggtgttctggtacttccatcttcaactcaatgatcaataacatcattattagaaccctcctaataaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgacgtgttggctagttatccctttcctatcgattgtcttgagttggctaagactggtaaggagtatggtttgactatgacacctgcagataaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccaattcccattcttaattcaccctacgatgcctatgaaggagatccatgagtccattcgatggaccaaagacgcacgcaatacccaagaccacgtgcgctccctgtgtctgttggcatggcacaacggcaaggatgaatatgagaaatttgtgagcacaattagatcagtcccagttggaaaagcgttggctattcctaattttgagaatttgagaaggaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>GQ231934.1_Human_enterovirus_71_strain_TW/70811/08_complete_genome
------------------ttaaaa--cag--ct-gtgggttg-c-acccactcaca-ggacccac-g-tggtgctagcactctggttctacggaacctttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gcaacttagaagc------------aatttacaacact-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaatc-cagtagcgccattgaagctgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atcctcacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttataccac-----taacctt--------------aaaatctgcaacc-actctcgagtatatattaaccctcaatacaatcaaa-----catgggctcacaggtgtctacccaacgatccggctcccatgaaaactccaactcagccacag-aaggctccactattaattacaccactattaactattacaaagattcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacatttttactgaaatggctgcccctctaaagtctccatccgctgaagcttgtggttacagtgatcgcgtagcacaactcaccatcggaaactccaccattactacacaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgctccgatgacgacgctacagcggtggataaaccaacgcgcccagatgtttccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagttccctgacgtactgactgagaccggagtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcatccatgtgcaatgtaacgctagcaagttccaccaaggagcgctgttggtcgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aggacagtcaccctccttacaaacaaacacaaccaggtgccgacggctttgaattgcagcacccgtatgtgctcgatgctgggatccctatatcacaattgacaatatgcccccatcaatggatcaacctgcggaccaataactgtgccacaataatagtgccatatatgaatacattgccttttgactccgccctgaaccattgcaattttgggctgctggtagtgcccattagcccattggattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggctttcccactgagccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccattctgccaaattttcatcccactccgtgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------tgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcaatggtccgggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggtaagatgctcatagcttatacacctcctggtggccccttacccaaggaccgggctacagcaatgctgggcacacatgttatctgggactttgggctacaatcatctgtcacccttgtgataccatggatcagtaatacccactacagggcgcatgcccgagatggggtgtttgattactataccacgggactggtcagtatctggtatcaaacaaattacgtggtcccaataggggcacccaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggccctcacccaggcccttccggca--------cccacaggacaaaacacgcaggtgagcagccatcgattagacactggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagactaccctggacagttttttcagcagagcaggtttggtaggagagatagacctccctctagagggtaccac-caatccaaatggttatgccaactgggacatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggaattcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccagattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatatggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtatcctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaattacaccggtaa----ctccattaaaccgaccggtactagtcgtaccgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataatgactgggcaaacctcgtttgggaagacagctcccgtgacctattagtgtcgtctaccaccgcccagggctgtgacataattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaaaagaaagcactatccagtcagcttttctaaacccagcctcatatacgtggatgctagcgagtattaccctgctagatatcaatcgcacctgatgctcgcagcgggccattctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtgtccacaggtggcgacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtatccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtgattgtgatcaggagcgattatgatatggttactctcacagccactttagccctgattggttgccatggtagtccttgggcttggatcaaagccaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgtcccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgccg-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgatcattttgacgggtataaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggatatgtcattattttgccagatggtgtccaccgtggattttatcccaccaatggcttctcttgaagaaaagggagtttcttttacatctaaatttgttatcgcatccaccaatgccagcaacatcatagtgcctacagtgtctgactctgacgccatccgacgcaggtttttcatggattgcgacattgaggtgacggattcatacagaacagacttgggtagattagatgctggacgggctgctaagttatgctctgaaaacaacaccgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggttaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggcaatacaattgaagcactattccaaggcccgcccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagtgatctcctcgctagtgtagacagcgaggaagtgcgccaatactgt-agggagcaaggctggattatccctgaaactcccactaatgttgaacgacatcttaacagagcagtactagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacatcaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcccgggaagactatttgggtggagcacaaacttgtgaacgtccttgacgcagttgagctggtggatgagcagggcgttaacttggaactcacactggtgacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtgccgctagtgatgcaactttagtgatcaatacagagcatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgcggaggtgtggtcacatcagtcggtaagattgttggtattcacatcggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaaacctaacaaagaaactggtaggctgaacatcaatggaccaactcgcactaagctggagcctagtgtatttcatgatgtgtttgaaggcaataaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcgaaccaacttaaacagttggacataaacactagcaagatgagcatggaagaagcgtgctatggcactgagaacctggaagcaatagacctctgtactagtgctggatatccatacagcgcccttggcatcaagaaaagagacattctcaaccccgtaactagggatgtgtctaagatgaaattctatatggacaaatacgggctagatctgccatactccacctacgtgaaggatgagcttagatctctggataaaatcaagaaagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacctttgggcacctttacgaggtatttcacgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctactgcctgggtcactctttgcctttgattactcagggtatgatgctagcctcagcccggtatggtttagggccttagaagttgtgttacgggaaattgggtatccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtgtaccggaacaaaacatactgtgtacttggaggaatgccctcagggtgttctggtacttccatcttcaactcaatgatcaacaacatcattattagaaccctcctaataaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgacgtgttggctagttatccctttcctatcgattgtcttgagttggctaagactggtaaggagtatggtttgaccatgacacctgcagacaaatcaccctgttttaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccaattcccattcctaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcacgcaatacccaagaccacgtgcgctccctgtgtctgttggcatggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggctattcctaattttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-g-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaa-----------------------------------------------------------------------------------------------------------------------------------------
>KF974786.1_Enterovirus_A71_isolate_M1288-TW08_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-ggacccac-g-tggtgctagcactctggttccacggaacctttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatgtacaacact-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttaaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcgccattgaagctgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtgatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatccgtaacc-actctcgagtatatattaaccctcaatacaatcaaa-----catgggctcacaggtgtctacccaacgatccggctcccatgaaaactccaactcagccacag-aaggctccactattaattacaccactatcaactattacaaagattcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtctccatccgctgaagcatgtggttacagtgaccgcgtggcacaactcaccatcggaaactccactattactacacaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgctccgatgacgacgctacagcggtggataagccaacgcgcccagatgtttccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagttccctgatgtactgactgagatcggagtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcatccatgtgcaatgtaacgctagcaagttccaccaaggagcgctgttagtcgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aggacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgctgggatccctatatcacaattgacaatgtgcccccatcaatggatcaacctgcggactaataactgtgccacaataatagtgccatatatgaatacattgccttttgactccgccctgaaccattgcaattttgggctgttggtagtgcccattagcccattggattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggctttcccactgagccaaaaccagggacgaaccaattcttgaccaccgatgatggtgtttcagcacccattttgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtacccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagccg------ggaaaggtgaattgtgtgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcaatggtctgggtcactagaggttactttcatgttcaccgggtccttcatggccacgggtaagatgctcatagcttatacacctcctggtggccccttacccaaggaccgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtgataccatggatcagtaatacccactacagggcgcatgcccgggatggggtgtttgattactataccacggggctagtcagtatctggtatcaaacaaattacgtggtcccaattggggcacccaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagacagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggcccttccggca--------cccacaggacaaaacacacaggtgagcagccatcgattagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagactactctggacagtttcttcagcagagcaggtttggtaggagagatagatctccctctaaagggtaccac-caatccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaggtggagctgttcacttatatgcgttttgatgcggaattcactttcgtcgcgtgcactcctactggcgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccagactctagggaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatatggagcatgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtaccctttggttgttagaatatatatgagaatgaagcatgtcagagcgtggatacctcgcccgatgcgcaaccaaaactacttattcaaagccaacccaaattacgccggtaa----ctccattaaaccgaccggtactagtcgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggggccatttacgtgggcaacttcagagtggttaatcgccacctcgctactcataatgactgggcaaacctcgtttgggaagacagctcccgtgacctattagtgtcgtctaccaccgcccagggctgtgacacaattgcacgctgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttttctaaacccagcctcatatacgtggatgctagcgagtattaccctgctagatatcaatcgcacctgatgctcgcagcaggccactctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtgtccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaggccatggagcaaggtgtctctgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtgattgtgatcaggagtgattatgatatggttaccctcacagccactttagccctgattggttgtcatggaagtccttgggcctggatcaaagccaagacagcatccattttaggcatccctattgcccagaagcagagtgcctcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcaactagagagaaagcagaattcttaaccaatttgaagcaattgcca-ctgttggagaaccagatcacaaatttggaacagtccgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcatacctcgctca---------tttttgtcgcaaattccaaccattatacgccacggaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttattattagaggctcaccaggcactgggaagtctcttgcgaccggcatcattgctcgggccatagcagataagtatcactctagcgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggatatgtcattattttgccagatggtgtccaccgtggattttattccaccaatggcttctcttgaagaaaagggagtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacattatagtgcctacagtgtctgactctgacgccatccgacgcaggttttacatggattgcgacattgaggtgacggattcgtacaaaacagacttgggtagactagatgctggacgggctgctaagttatgctctgaaaacaacaccgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaactcagagacagaaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcaggccaattaggatc---agtcttgaggagaagccagccccagacgctattagtgatctcctcgctagtgtagacagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccactaatgttgaacgacatctcaacagagcagtgctagttatgcaatccatcgctactgtggtggcggttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacatcaggcaggtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcccgggaagactatttgggtggagcacaaacttgtgaacgtcctcgacgcaatcgagctggtggatgagcagggcgttaatttggaactcacattggtgacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtggcgctagtgatgcaactttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgtcaagggttctgtgctggtctgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaacaaagaaaccggtaggttgaacatcaatggaccaactcgcactaagctggagcctagtgtatttcatgatgtgtttgaaggcaataaggaaccagcggtcttaacgagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggtaatgttttacatgagccagatgaatacgtgacacaagctgccctccactatgcaaaccagcttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaatctggaagcaatagatctctgtactagtgctggatatccatacagcgcccttggcatcaagaaaagagacattctcaaccccgtaactagggatgtgtctaagatgaaattctatatggacaaatacgggctagatctaccatactccacctacgtgaaggatgagcttagatctctggaaaaaatcaagaaagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtgtttcatgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctactgcctgggtcactctttgcctttgattactcagggtatgatgctagcctcagcccggtatggtttagggctttagaagttgtgttgcgggaaattggatatccggaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtgtaccggaacaaaacatactgtgtacttggtggaatgccctcagggtgttctggtacttccatcttcaactcaatgatcaacaacatcattattagaaccctcctaataaaaacctttaaggggatagatctggatgagctgaacatggtggcctatggggacgacgtgttggctagttatccctttcctatcgattgtcttgagttggctaaaactggcaaagagtatggtttgactatgacacctgcagacaagtcaccctgtttcaatgaagtgacatgggaaaacgctaccttcctcaagagaggattcttgccagaccaccaattcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcacgtaatacccaagatcacgtgcgctccctatgtctgttggcatggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccatccctaattttgagaatttgagaagaaattggctcgagttatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgtcaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HM622390.1_Human_enterovirus_71_isolate_2009-03531_polyprotein_gene_complete_cds
---------------------------------------------------------------------------agcactctggttctacggaacctttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttacaacact-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcgccattgaagctgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atcctcacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcga-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttataccac-----taacctt--------------aaaatctgtaacc-actctcgagtatatattaaccctcaatacaatcaaa-----catgggctcacaggtgtctacccaacgatccggctcccatgaaaactccaactcagccacag-aaggctccactattaattacaccactatcaactattacaaagattcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtctccatccgctgaagcttgtggttacagtgaccgcgtggcacaactcaccatcggaaactccactattactacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctccgatgacgacgctacagcggtggataagccaacacgcccagatgtttccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagttccctgatgtactgactgagatcggagtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcattcatgtgcaatgtaacgctagcaagttccaccaaggagcgctgttagtcgctatacttccagagtatgtcatagggacagtggcaggcggcacaggaacag------aggacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgctgggatccctatatcacaattgacaatatgcccccatcaatggatcaacctgcggactaataactgtgccacaataatagtgccatatatgaatacattgccttttgactccgccctgaaccattgcaattttgggctgctggtagtgcccattagcccattggattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggctttcccactgagccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccactccgtgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------tgtacccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcaatggtccgggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggtaagatgctcatagcttatacacctcctggtggccccttacccaaggaccgggctacagcaatgctgggcacacatgttatctgggactttgggctacaatcatctgtcacccttgtgataccatggatcagtaatacccactacagggcgcatgcccgagatggggtgtttgattactataccacgggactggtcagtatctggtatcaaacaaattacgtggtcccaataggggcacccaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggcccttccggca--------cccacaggacaaaacacacaggtgagcagccatcgattagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagaccaccctagacagtttcttcagcagagcaggtttggtaggagagatagatctccctctagagggcaccac-caatccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaggtggagctgttcacctatatgcgctttgatgcggaattcactttcgtcgcgtgcactcctactggcgaggttgttccgcaactactccagtacatgtttgttccccctggtgctcctaaaccagactctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgagtacggagcatgtcctaacaacatgatgggcactttctcggtgcggaccgtagggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaattacgccggtaa----ctccattaaaccgaccggtgctagtcgtactgccat---taccac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggagccatctacgtgggcaacttcagagtggttaatcgccacctcgctactcataatgactgggcaaacctcgtttgggaggacagctcccgtgacctattagtgtcgtctaccaccgcccagggttgtgacacaattgcacgctgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttttctaaacccagcctcatatacgtggatgctagcgagtattaccctgctagatatcaatcgcacctgatgctcgcagcaggccactctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtgtccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaggccatggagcaaggtgtttctgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtgattgtgatcaggagtgattatgatatggttaccctcacagccactttagccctgattggttgtcatggaagtccttgggcctggatcaaagccaagacagcatccattttaggcatccctattgcccagaagcagagtgcctcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaatttgaagcaactgcca-ctgttggagaaccagatcacaaatttggaacagtccgctgcctcacaagaggaccttgaagtcatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaaattccaaccgttatacgccacggaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagatcctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggatatgtcattattttgccagatggtgtccaccgtggattttattccaccaatggcttctcttgaggaaaagggagtttctttcacatctaaatttgttatcgcatccaccaacgccagcaacattatagtgcctacagtgtctgactctgacgccatccgacgcaggttttacatggattgcgacattgaggtgacggattcatacaaaacagacttgggtagactagatgctggacgggctgctaagttatgctctgaaaacaacaccgcaaacttcaaacgatgcagccctttagtgtgtgggaaagctattcaacttagagacagaaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagtgatctcctcgctagtgtagacagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccactaatgttgaacgacatctcaacagagcagtgctagttatgcaatccatcgctactgtggtggcggttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagcgctcaagaaacccgtcctccgcacggcaacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacatcaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcccgggaagactatttgggtggagcacaaacttgtaaacgtcctcgacgcaatcgagctggtggatgagcagggcgttaatttggaactcacattggtgacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtggcgctagtgatgcaactttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgtcaagggttctgtgctggtctgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaacaaagaaactggtaggttgaacatcaatggaccaactcgcactaagctggagcctagtgtatttcatgatgtgtttgaaggcaataaggaaccagcggtcttaacgagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcgaaccaacttaaacagttggacataaacactagcaagatgagcatggaagaagcgtgctatggcactgagaatctggaagcaatagatctctgtactagtgctggatacccatacagcgcccttggcatcaagaaaagagacattctcaaccccgtaactagggatgtgtctaagatgaaattctatatggacaaatacgggctagatctgccatactccacctacgtgaaggatgagcttagatctctggaaaaaatcaagaaagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtgtttcatgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctactgcctgggtcactctttgcctttgattactcagggtatgatgctagcctcagcccggtatggtttagggccttagaagttgtgttacgggaaattggatatccggaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtgtaccggaacaaaacatactgtgtacttggtggaatgccctcagggtgttctggtacttctatcttcaactcaatgatcaacaacatcattattagaaccctcctaataaaaacctttaaggggatagatctggatgagttgaacatggtggcctatggggacgacgtgttggctagttatccctttcctatcgattgtcttgagttggctaagactggcaaagagtatggtttgactatgacacctgcagacaagtcaccctgtttcaatgaagtgacatgggaaaacgctaccttcctcaagagaggattcttgccagaccaccaattcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtctgttggcatggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcctaattttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctgg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ724182.1_Human_enterovirus_71_strain_BRU/2006/35334_mouse-adapted_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-ggacccac-g-tggtgctagcactctggttctacggaacctttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gcaatttagaagc------------gattcacaacaca-gatcaa-tagcaggcatggcgcaccagctatgtctcga-tcaagcacttctg-tttccccggaccgactatcaatagactgc-tcacgtggttgaaggagaaaacgtccgttatccggctaactacttcgagaaacc-tagtagcgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccgcgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgataattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacttt--------------aaaatctgtaacc-actctcgactatatattaaccctcaatacaaataaa-----catgggctcacaggtgtccgctcaacgatccggctcccatgaaaactctaattcagctacag-aaggctctactattaattacaccactattaactattacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcgcctctaaagtctccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattactacacaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgttccgatgacgacgctacagcggtggataagccaacgcgcccagatgtttccgtgaataggttttatacattggacactaaactgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcactatttgtatagatcagggttttgcatccatgtgcaatgtaacgctagcaagttccaccaaggagcgctgttagtcgctatacttccagagtacgtcatagggacagtggcaggcggtacaggaacag------aggacagtcaccctccttacatacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgctgggatccctatatcgcaactgacaatatgcccccatcaatggattaacttgcggaccaacaactgtgccacaataatagtgccatatatgaatacactgccttttgattccgccctgaaccattgcaactttgggctgttggtagtgcccattagcccattggattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcacccaaggctttcccactgaaccaaaaccagggacgaatcaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccacaccatgcattcacatacccggtgaagtcagaaacctgcttgagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctactagtttg------atggaaagactacgattcccagtgtccgcgcaagcgg------ggaaaggtgaattgtgtgctgtgtttagggctgatcctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcagtggtcagggtcactggaggtcactttcatgttcaccgggtcttttatggccacgggtaagatgctcatagcttatacacctcctggcggccccttacccaaagaccgggctacagcaatgctgggtacacatgttatctgggattttgggctgcaatcatctgtcactcttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtgttcgactactataccacaggactggtcagtatctggtatcaaacaaattacgtagtcccaattggggcacccaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaaactgtgcaaagacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagccatcgactggacaccggtgaagtcccagcgctccaagctgctgagattggggcatcatcaaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagactaccctggacagtttcttcagtagagcaggtttagtaggagagatagatctccctctagagggtaccac-taatccaaatggttatgctaattgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggaattcactttcgttgcgtgcactcctactggtcaggttgtcccacaactactccagtatatgtttgttccccctggtgctcccaaaccagattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtaccccacgttcggagaacacaaacaagagaaagatcttgaatatggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtctttaaagtccgagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagggcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattatgccggtaa----ctccattaagccgaccggtactagtcgtaccgctat---taccac---------------------------------------ccttgga------------------------------------------aagttcggacagcaatctggggccatctacgtaggcaacttcagagtggttaatcgtcacctcgctactcataatgactgggcaaacctcgtttgggaagacagctcccgcgacctattagtatcgtctaccaccgcccagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttctccaagcccagcctcatatacgtggaagctagcgattattaccctgctagataccaatcgcacctgatgctcgcagcgggccactctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtgtccacgggtggcaacggacttgttggttttgctgacgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggcttggtgacgcgtttgggacaggcttcaccgatgctgtgtctagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaatcctaaagaaccttattaaactgatttcagcgctagtgattgtgatcaggagtgattatgatatggtcaccctcactgccactttagccctgattggttgccacggaagtccttgggcttggattaaagccaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaaattcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaaattcattgaatggctcagagagaagattgttccagcagctagagagaaagcagagttcttaaccaacttgaagcaattgcca-ctgttagaaaaccagatcacaaatttggaacagtccgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaagttccaaccattatacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccgggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcactgccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgacctgtgtcagaatcccgacggcaaggatatgtcattattttgccagatggtgtccaccgtggattttatcccaccaatggcttctcttgaagagaagggagtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacattatagtgcctacagtgtctgactctgacgccatccgacgcaggttttacatggattgcgacattgaggtgacggattcatacaaaacagacttgggtagactagatgctggacgggctgctaaattatgctctgaaaacaataccgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcagcttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtttctgaacttattagagaatacaatagcagatctgctattggtaacacaattgaagcactatttcaaggcccgcccaagttcaggccaattaaaatc---agtcttgaggagaagccagccccagacgctattagcgatctcctcgctagtgtagacagcgaggaagtgcgccaatactgt-agggagcaaggttggatcatccctgaaactcccactaatgttgaacgacatcttaacagagcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtgcagggtccaagccttgactttgctctatccctgctgagaagaaacatcaggcaagttcaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcccgggaagactatttgggtggagcacaaacttgtgaacgtcctcgacgcaatcgagctggtggatgaacagggcgttaatttggaactcacattggtgacactagacactaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtggcgctagtgatgcaactttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgtcgtgcagtatgggttcttgaaccttagtggaaagccaacacataggaccatgatgtacaatttccctacaaaagcaggacaatgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagagaagttacttcgcaagtgtacagggtgagatccaatgggtgaagcctaacaaagaaactggtagactgaacatcaatggaccaactcgcactaagctggagcctagtgtgtttcatgatgtgtttgaaggcaataaggaaccagcagtcttaacaagcaaagaccctagattggaggttgactttgagcaagccctgttctccaagtatgtgggcaatgttttacatgagcccgatgaatacgtgactcaagctgccctccactatgcgaatcaacttaaacagttggacataaacactaacaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgccggatatccatacagcgcccttggcatcaagaaaagagacattctcgaccccgtaaccagggacgtgtctaagatgaaattctacatggataaatacgggctagatctgccatactccacctacgtgaaggatgagcttagatctctggataaaatcaagaaaggaaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggtacctttacgaggtatttcatgctaaccctggcactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctactccctgggtcactctttgcctttgactactcaggatatgatgctagcctcagcccagtatggttcagggccttagaaattgtgttgcgggaaattggatatccagaggaggccgtgtccctaatagaaggaatcaaccacactcaccacgtgtaccggaacaaaacatactgtgtacttggtgggatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacatcatcattagaaccctcctaataaaaacttttaagggaatagacttggatgagttgaacatggtggcctatggggacgatgtgctggctagctatccctttcctatcgattgccttgagttggctaagactggtaaagagtatggattgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgccacctttcttaagagagggttcttgccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcacgcaatacccaagaccacgtgcgctccctgtgtctattggcatggcacaacggtaaggatgaatatgagaaatttgtgagtgcaattagatcagttccagttggaaaagcgttggccattcccaattatgagaatttgagaagaaattggctcgaattatttt--aa-cattacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ357378.1_Human_enterovirus_71_isolate_N2838-TW03_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-ggacccac-g-tggtgctagcactctggttctacggaacccttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gcaacttagaagc------------aattcacaacact-gatcaa-tagcaggcatggcgcaccagccatgtcttga-tcaagcacttctg-tttccccggaccaagtatcaatagactgt-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctgtaacc-actctcgactatatattaacccttaatacaatcaaa-----catgggctcacaggtatccactcaacgatccggctcccacgaaaactccaattcagctacag-aaggctccaccattaattacaccactattaactattacaaagactcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcgcctctaaagtctccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccattggaaactccaccattactacacaggaagcagcaaacattatagtcggttatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtttccgtgaataggttttatacattggacactaaactgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtattgactgagaccggagtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcatccatgtgcaatgtaacgctagcaagttccaccaaggagcgctgttagtcgctatacttccagagtatgtcatagggacagtggcaggcggcacaggaacag------aggacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgctgggatccctatatcacaattgacagtatgcccccatcaatggattaacctgcggaccaataactgtgccacaataatagtgccatatatgaatacactgccttttgactccgccctgaaccattgcaattttgggctgttggtagtgcccattagcccattagattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggctttcccaccgagccaaaaccagggacgaatcaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctagagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgccgtgtttagggctgatcctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcagtggtcagggtcactggaggttactttcatgttcaccgggtctttcatggctacgggtaagatgctcatagcttatacacctcctggcggccccttacccaaagatcgggctacagcaatgctgggtacacatgttatctgggattttgggctacaatcatctgtcacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggagtgttcgactactataccacaggactggtcagtatctggtatcaaacaaattacgtagtcccaattggggcacccaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaaactgtgcaaagacactagtcacatattacaaacagcctctattcagggagataga--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagccatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcgtcaaatactagtgatgagagtatgattgaaacacgatgcgtccttaactcacacagcacagcagagactaccctggacagtttcttcagcagagcaggtttggtaggagagatagatctccctttacagggtaccac-caatccaaatggttatgccaactgggatatagacataactggttatgcacaaatgcgcaggaaagtggaactgttcacctatatgcgctttgatgcggaattcactttcgttgcatgcactcctactggtgaggttgttccacaactactccagtatatgtttgttccccctggtgctcctaaaccagagtctagaaaatcacttgcttggcagacagccacaaacccttcagtttttgtcaaattaactgatcccccagcacaggtctcagttccgttcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggagaaagatcttgaatatggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagggcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattatgccggtaa----ctccattaagccgaccggtactagtcgtaccgctat---tactac---------------------------------------tcttgga------------------------------------------aagttcggccagcaatctggggccatctacgtgggtaacttcagagtggtcaatcgtcacctcgctactcataatgactgggcaaacctcgtttgggaagacagctcccgcgacctattagtgtcgtctaccaccgcccagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttctctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagcaggccactctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtgtccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgactacatcaag-gggcttggtgacgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggagccaccttataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtaattgtgatcaggagcgattatgatatggtcaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccatcttaggcatccccattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaataaaattagtaaattcattgactggctcagagagaagattgttccagcagctagagagaaggcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacgaatttagaacagtccgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaagttccaaccattgtacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgacggtaaggatatgtcactattttgccagatggtgtccaccgtggactttatcccaccaatggcttcccttgaagaaaagggagtttctttcacatctaaatttgttatcgcatccaccaacgccagtaacattatagtgcctacagtgtctgactctgacgccatccgacgcaggttttacatggattgcgacattgaggtgacggactcatacaaaacagacttgggtagactagatgctggacgggctgctaagttatgctcagaaaacaacaccgcaaacttcaaacgatgcagccctctagtgtgtggaaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctattggtaacacaattgaagcactattccaaggcccgctcaagttcaggccaattagaatc---agtcttgaggagaaaccagccccagacgctattagcgatctcctcgctagtgtagacagcgaggaagtgcgccaatactgt-agggagcaaggttggatcatccctgaaactcccactaatgttgaacgacatcttaacagagcagtgctagttatacaatccatcgctactgtggtggcagttgtctcactggtgtatattatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcgagtgctcaagaaacccgtcctccgcacggcaacagtgcagggtccaagtcttgattttgccctatccctgctgagaaggaatatcaggcaagtccaaacagatcaggggcattttactatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcccgggaagactatttgggtggaacacaaacttgtgaacgtcctcgacgcaatcgagctggtggatgaacagggcgttaatttggaactcacattggtgacactagacactaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaactttagtgatcaatacagaacatatgccatcaatgttcgtcccagtgggggacgtcgtgcagtatggattcttgaaccttagtggaaagccaacacataggaccatgatgtacaatttccctacaaaagcaggacaatgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtgtgcagggtgagatccaatgggtgaagcctaacaaagaaactggcagactgaacatcaatggaccaactcgcactaagctggagcctagtgtgtttcatgatgtgtttgaaggtaacaaggaaccagcagtcttaacaagcaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcccgatgaatacgtgactcaagctgccctccactatgcgaaccaactcaaacagttggacataaacactagcaggatgagcatggaggaagcgtgctacggcactgagaatctcgaagcaatagatctctgtactagtgccggatatccatacagcgcccttggcatcaagaaaagagacattctcgaccccgtaaccagggatgtgtctaagatgaaattctatatggataaatacgggctagatctgccatactccacttacgtgaaggatgagcttagatctctggataaaatcaagaaaggaaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttggacacctttacgaggtatttcatgctaaccctggcactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaaactaccgatcctactgcctgggtcactctttgcctttgactactcaggatatgatgctagcctcagcccggtatggttcagggctctagaaattgtgctacgggaaattgggtatccagaggaggccgtgtccctaatagaaggaatcaaccacactcaccacgtgtaccggaacaaaacatactgtgtacttggtgggatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacatcatcatcagaaccctcttaatcaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctttcctatcgattgccttgagttggctaagactggcaaagagtatggtttgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttccttaagagagggttcttgccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcacgcaatacccaagatcacgtgcgctccctgtgtctgttggcatggcacaatggtaaggaagaatatgagaaatttgtgagtgcaattagatcagttccagttggaaaagcgttggccattcctaattttgagaatttgagaagaaattggctcgaattatttt--aa-cattacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>DQ341362.1_Human_enterovirus_71_isolate_SB12736-SAR-03_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-ggacccac-g-tggtgctagcactctggttctacggaacctttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gcaacttagaagc------------aattcacaacact-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--ttct---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctgtaacc-actctcgactatatattaaccctcaatacaatcaaa-----catgggctcacaggtgtccactcaacgatccggctcccatgaaaactctaattcagctacag-aaggctccaccattaattacaccactattaactattacaaagattcctatgctgcgacagccggcaaacagagccttaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcgcctctaaagtctccatccgctgaagcttgtggttacagtgatcgtgtggcacaactcaccattggaaactccaccattactacacaggaagcagcaaacatcatagtcggttatggtgaatggccctcatactgctccgatgacgacgctacagcggtggataagccaacgcgcccagatgtttccgtgaataggttttatacgttggacactaaactgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtattgactgagaccggagtctttggccaaaacgcacaatttcactatttatatagatcagggttttgcatccatgtgcaatgtaacgctagcaagttccaccaaggagcgctgttagtcgctatacttccagagtatgtcatagggacggtggcaggcggtacaggaacag------aggacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgctgggatccctatatcacaattgacagtatgcccccatcaatggattaacctgcggaccaataactgtgccacaataatagtgccatatatgaatacactgccttttgactccgccctgaaccattgcaattttgggctgttggtagtacccattagcccattagattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcaggcaggcagtcactcaaggctttcccactgagccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctactagtttg------atggaaagactacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgctgtgtttagggctgatcctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcagtggtcagggtcactggaggtcactttcatgttcaccgggtctttcatggccacgggtaagatgctcatagcttatacacctcctggcggtcccttacccaaagatcgggctacagcaatgctgggcacacatgttatttgggattttgggctacaatcatctgtcacccttgtgataccatggatcagtaatacccactacagagcgcatgcccgggatggagtgttcgactactacaccacaggactggtcagtatctggtaccaaacaaattacgtagttccaattggggcacccaacacagcttacataatagcactggcggcggcccagaagaatttcaccatgaaactgtgcaaagacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggtactcacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagtagccatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcgtcaaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagactaccctggacagtttcttcagcagagcaggtttggtaggagagatagatctccctctagagggtaccac-caatccaaatggttatgccaactgggatatagacataactggttatgcacaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggaattcactttcgttgcgtgcactcctactggtgaggttgttccacaactactccagtacatgtttgttccccctggtgctcctaaaccagattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgatcccccggcacaggtctctgttccgttcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggagaaagatcttgaatatggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatacatgagaatgaagcatgtcagggcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattatgccggtaa----ctccattaagccgaccggtactagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataatgactgggcaaacctcatttgggaagacagctcccgcgacctattagtgtcgtctaccaccgcccagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttttctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtgtccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggcttggtgacgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagtgttagtaattgtgatcgggagcgattatgatatggtcaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcatccccattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaaattcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttagaacagtccgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaagttccagccattatacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggatatgtcattattttgccagatggtgtccaccgtggattttatcccaccaatggcttctcttgaagaaaagggagtttcttttacatctaaattcgttgtcgcatccaccaacgccagcaacattatagtgcctacagtgtctgactctgacgccatccgacgcaggttttacatggattgcgacattgaggtgacggactcatacaaaacagacttgggtagactagatgctggacgggctgctaagttgtgctctgaaaacaacaccgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctattggtaacacaattgaagcactattccaaggcccgcccaagttcaggccaatcagaatc---agtcttgaggagaagccagccccagacgctattagcgatctcctcgctagtgtagacagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccactaatgttgaacgacatcttaacagagcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttataagctctttgcggggttccaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcaacagtgcagggtccaagtcttgactttgctctatccctgctgagaaggaacatcaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcccgggaagactatttgggtggagcacaaacttgtgaacgtcctcgacgcaatcgagctggtggatgaacagggcgttaatttggaactcacactggtgacactagacactaatgaaaaatttagagatatcaccaagttcattccagagaccattagtggcgctagtgatgcaactttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgtcgtgcagtatgggttcttgaaccttagtggaaagccaacacataggaccatgatgtacaatttccctacaaaagcaggacaatgtggaggtgtggtcacatcggtcggtaagatcgttggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtgtgcagggtgagatccaatgggtgaaacctaacaaagaaactggtagactgaacatcaatggaccaactcgcactaagctggagcctagtgtgtttcatgaagtgtttgaaggcaataaggaaccagcagtcttaacaagtaaagaccctagactggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcccgatgaatacgtgactcaagctgccctccactatgcgaatcaactcaaacagttagacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgccggatatccatacagcgcccttggcatcaagaaaagagacattctcgaccccgtaaccagggatgtgtctaagatgaaattctatatggacaaatacgggctagatctgccatactccacctacgtaaaggatgagcttagatctctggataaaatcaagaaaggaaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggcactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaaactaccgatcctactgcctgggtcactctttgcctttgactactcaggatatgatgctagcctcagcccggtatggttcagggccctagaaattgtgttacgggaaattgggtatccagaagaggccgtgtccctaatagaaggaatcaaccacactcaccacgtgtaccggaacaaaacatactgtgtacttggtgggatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacatcatcattagaaccctcttaatcaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctttcctatcgattgccttgagttggctaagactggcaaagagtatggtttgactatgacgcctgcagacaaatcaccctgtttcaatgaagtgacgtgggaaaatgctaccttccttaagagagggttcttgccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcggtggactaaagacgcacgcaatacccaagaccacgtgcgctccctgtgtctgttggcatggcacaacggtaaggatgaatatgagaaatttgtgagtgcaattagatcagttccagttggaaaagcgttggccattcctaattttgagaatttgagaagaaattggctcgaattatttt--aa-cattacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>DQ341364.1_Human_enterovirus_71_isolate_5511-SIN-00_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccactcaca-gggcccac-g-tggtgctagcactctggttctatggaacccttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gcaacttagaagc------------aattcacaacact-gatcaa-tagcaggcatggcgtaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactgcagagtgtttcgctcggca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgcttcaatgtggacatggtgcg-aagagtcaattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aagatctataacc-accctcggctttatattaaccctcaatacaatcaaa-----catgggctcacaggtgtccactcaacgatccggctcccacgagaactccaattcagctacag-aaggctccaccattaattacaccaccatcaactattacaaagactcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcgccactgaagtctccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccattggaaactccaccattactacacaggaagcggcaaacatcatagtcggttatggtgagtggccctcatactgctctgatgacgacgctacagcggtggacaagccaacacgcccagatgtctcagtgaataggttttatacattggacactaaactgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtgttgactgagaccggagtctttggccagaacgcacagtttcactatttatatagatcagggttttgcattcatgtgcaatgtaacgctagcaaattccaccaaggagcgctgttagtcgctatacttccagagtatgtcatagggacagtggcaggcggcacaggaacag------aggacagccaccctccttacaaacaaacacaaccaggtgccgacggttttgaactgcagcacccgtatgtgctcgatgctgggattcccatatcacaattgacagtgtgcccccatcaatggattaacctgcggaccaataactgtgccacaataatagtgccatatatgaatacactgccttttgactccgccctgaaccattgcaattttgggctgttggtagtgcccattagcccattagattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtctcagacaggcagtcactcaaggctttcccactgagccaaaaccagggacgaatcaattcttgaccaccgatgacggcgtctcagcacccattctgccaaatttccaccccactccatgtattcacatacccggtgaagtcagaaacctgcttgagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctactagtctg------atggaaagactacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgccgtgtttagggccgatcctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacacccagtggtcagggtcactggaggtcactttcatgtttaccgggtctttcatggccacgggtaagatgctcatagcttatacacctcctggcggccccttacctaaagatcgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggagtgttcgactactataccacaggactggtcagtatctggtatcaaacaaattacgtagtcccaattggagcacccaacacagcttacataatagcactggcggcagcccagaagaattttaccatgaaactgtgcaaagacaccagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtaagtagggcactcacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagccatcgactagacaccggcgaagttccagcgctccaagctgctgagatcggggcatcgtcaaatactagtgatgagagcatgattgagacgcgatgcgttcttaactcacacagtacagcagagaccaccctggacagtttcttcagtagagcaggtttggtaggagagatagatctccctctagagggtaccac-caatccaaatggttatgccaactgggatatagacataactggttatgcacaaatgcgcaggaaagtggagctgttcacctacatgcgctttgatgcggaattcacttttgttgcgtgcactcctgctggtgaggttgttccacaactactccagtatatgtttgttccccctggtgctcccaaaccagagtctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggagaaagatcttgagtatggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcatcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaaacatgtcagggcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaactatgccggtaa----ctccattaaaccgaccggtactagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgccactcataatgactgggcaaacctcgtttgggaagacagctcccgcgacctattagtgtcgtctaccaccgcccagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttttctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagcgggccattctgagcccggcgactgcggaggcatcttaaggtgtcaacatggtgtagttggtatagtgtccacgggtggcaacgggctcgttggttttgctgatgtgagggatctcttgtggttagatgaagaagccatggagcaaggtgtgtccgactacattaag-gggcttggtgacgcgtttgggacaggcttcaccgatgctgtatccagggaagttgaagcccttagaaaccaccttataggatctgatggagcagttgagaaaatcctaaagaaccttattaaactgatttcagcgttagtaattgtgatcaggagcgattatgatatggtcaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggattaaagccaagacagcatccattttaggcattcccattgcccagaagcagagtgcttcttggctaaagaagtttaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagcaagttcattgactggctcagagagaagattgttccagcagctaaagagaaagcagaatttttaaccaacttgaagcaactgcca-ctgttagagaaccagatcacgaatttagaacagtccgctgcctcacaagaggatcttgaagccatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaagttccaaccattatacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactggaaagtcccttgcgaccggtatcattgctcgggccatagcagacaagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggtaaggacatgtcactattttgccagatggtgtccaccgtggattttatcccaccaatggcttctcttgaagaaaagggagtttctttcacatctaaatttgttatcgcatccaccaacgccagcaacattatagtgcctacagtgtctgactctgacgccatccgacgcaggttttacatggattgcgacattgaggtgacggactcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacaccgcgaacttcaaacgatgcagcccactagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatccgctattggtaacacaattgaagcactattccaaggtccacccaagttcaggccaatcagaatc---agtcttgaggagaagccagccccagacgctattagcgatctcctcgctagtgtagacagcgaggaagtgcgccaatactgt-agggaacaaggctggatcatccctgaaactcccaccaatgttgaacgacatcttaacagagcagtgctagtcatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacctgtcctccgcacggcaacagtgcagggtccaagtcttgactttgctctatccctgctgagaaggaacatcagacaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttggctgttctcccacggcacgcacagcccgggaagactatttgggtggagcacaaacttgtgaacattcttgacgcaatcgagctggtggatgaacagggcgttaatttggaactcacattggtaacactagacactaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaactctagtgatcaacacagaacatatgccatcaatgtttgtcccagtgggggacgtcgtgcagtatgggttcttgaaccttagtggaaagccaactcataggaccatgatgtacaatttccctacaaaagcaggacaatgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtgtgcagggtgagatccaatgggtgaagcctaacaaggaaactggtagactgaacatcaatgggccaactcgcactaagctggagcctagtgtatttcatgatgtgtttgaaggtaataaggaaccagcagtcttaacaagtaaagaccctagattggaggtcgactttgaacaagccctgttttccaagtatgtgggcaatgttttacatgagcccgatgaatacgtgactcaagctgccctccactatgcgaatcaacttaaacaattggacataaacactagcaagatgagcatggaggaagcgtgctacggcactgaaaacctggaagcaatagacctttgcactagtgccggatatccatacagcgcccttggcatcaagaaaagagacattctcgaccccgcaaccagggatgtgtctaagatgaaattctatatggataaatacgggctagatctgccatactccacctacgtgaaggatgagcttaggtccctggataaaatcaagaaaggaaagtcacgcctgatagaagctagtagcttgaatgactctgtttacctcagaatgacttttgggcacctttacgaggtgtttcatgctaaccctggcactgtgactggttcagcagtgggttgcaacccagacgtgttttggagtaaactaccaatcctactgcctgggtcactctttgcctttgactactcaggatatgatgctagcctcagcccggtatggttcagggctctagaagttgtgttacgggaaattgggtactcagaggaggccgtgtccctaatagaaggaatcaaccacactcaccacgtgtaccggaacaaaacatactgtgtacttggtgggatgccctcagggtgttctggcacttctatctttaactcaatgatcaacaacatcatcattagaacccttttaatcaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgctggctagttacccctttcctattgattgccttgagttggctaagactggcaaagagtatggtttgaccatgacacctgcagacaaatcaccctgtttcaatgaagtaacatgggaaaatgctaccttcctcaagagagggttcttgccagatcatcaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcacgcaatacccaagatcacgtacgctccctgtgcctgttggcatggcacaatggtaaggatgaatatgagaagtttgtgagtgcaattagatcagttccagttggaaaagcgttggccattcctaactttgagaatctgagaagaaattggctcgaattatttt--aa-cattacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430823.1_Enterovirus_A71_strain_EVA71/Homosapiens/VNM/15.1/2014_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctttaacc-actcttgagtgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctcccatgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcttatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttactaaccctgttaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagttccctgatgtactgactgagaccggggtctttggccaaaacgcacagttccactacttatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttggttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattgacgatatgcccccatcaatggatcaatttgcggaccaataactgtgccacaataatagtgccatatatgaatacattaccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccccattacaattactctagctccaatgtgctctgagtttgctggtctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgacggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcatatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaagtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacaatgctgggccagttgtgtggatattacacccaatggtcagggtcactagaggtcactttcatgtttaccgggtccttcatggccacgggcaagatgctcatagcttacacacctcctggtggccccttacccaaagaccgggctacagcaatgttgggcacacatgttatctgggattttggactacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtatttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactatgcaaggatactagtcacatattacagacagcctctattcagggagacagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcactccaagctgctgagatcggggcatcatcgaatactagtgacgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggatagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttatgcacaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcacttttgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggactctagagagtcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttatgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatatggggcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtgggatcttcaaaatccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccaaccggcgctagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctgttagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgcgattgtcaaacaggagtgtattattgtaactccaagagaaaacattatccagttagcttctctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagtgggccactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggctagatgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagctcttaggaaccacctcataggatctgatggagcagtagagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactctagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaaattcaatgatatggcgagtgctgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgtcccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttggagaaccagatcacaaatttagaacaatccgctgcctcgcaagaggatcttgaagccatgtttgggaacgtgtcataccttgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctacgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggcaaggacatgtcattgttctgccagatggtgtctaccgtggattttatcccaccaatggcttctcttgaagagaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtatctgactccgacgccattcgacgcaggttttacatggattgcgacattgaggtgacggactcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgcagtcctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggcaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggttggatcatccctgaaactcctaccaatgttgaacgacatctcaacagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtgcagggtccaagcctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttcttccacgacacgcacagcctgggaagactatttgggtggaacacaaacttgtgaacgtccttgatgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgttcgtcccagtgggggacgttgtacagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattattggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaagaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactacgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctacggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcattaagaaaagagacattctcaaccccgtgactagggatgtgtctaggatgaaattttatatggacaagtacgggctagacctgccatactccacctacgttaaggatgagcttagatctctagataaaatcaagagagggaagtcacgcttgatagaagctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctactacctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggtttagggctttagaagttgtgttacgggagattgggtaccctgaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaagacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaataacattattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctatcctatcgattgccttgagttggctaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgccaccttcctcaagagagggttcttgccagatcaccagttcccattcttaattcaccctacgatgcccatgaaagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgttccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagcct-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-atta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430824.1_Enterovirus_A71_strain_EVA71/Homosapiens/VNM/15.2/2014_polyprotein_gene_complete_cds
---------------------------ag-cct-gtgggttg-c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc--tc----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-ttacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctttaacc-actcttgagtgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctcccatgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcttatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttactaaccctgttaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagttccctgatgtactgactgagaccggggtctttggccaaaacgcacagttccactacttatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttggttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattgacgatatgcccccatcaatggatcaatttgcggaccaataactgtgccacaataatagtgccatatatgaatacattaccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccccattacaattactctagctccaatgtgctctgagtttgctggtctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgacggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcatatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaagtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacaatgctgggccagttgtgtggatattacacccaatggtcagggtcactagaggtcactttcatgtttaccgggtccttcatggccacgggcaagatgctcatagcttacacacctcctggtggccccttacccaaagaccgggctacagcaatgttgggcacacatgttatctgggattttggactacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtatttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactatgcaaggatactagtcacatattacagacagcctctattcagggagacagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcactccaagctgctgagatcggggcatcatcgaatactagtgacgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggatagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttatgcacaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcacttttgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggactctagagagtcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttatgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatatggggcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtgggatcttcaaaatccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccaaccggcgctagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctgttagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgcgattgtcaaacaggagtgtattattgtaactccaagagaaaacattatccagttagcttctctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagtgggccactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggctagatgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagctcttaggaaccacctcataggatctgatggagcagtagagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactctagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaaattcaatgatatggcgagtgctgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgtcccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttggagaaccagatcacaaatttagaacaatccgctgcctcgcaagaggatcttgaagccatgtttgggaacgtgtcataccttgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctacgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggcaaggacatgtcattgttctgccagatggtgtctaccgtggattttatcccaccaatggcttctcttgaagagaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtatctgactccgacgccattcgacgcaggttttacatggattgcgacattgaggtgacggactcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgcagtcctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggcaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggttggatcatccctgaaactcctaccaatgttgaacgacatctcaacagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtgcagggtccaagcctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttcttccacgacacgcacagcctgggaagactatttgggtggaacacaaacttgtgaacgtccttgatgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgttcgtcccagtgggggacgttgtacagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattattggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaagaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactacgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctacggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcattaagaaaagagacattctcaaccccgtgactagggatgtgtctaggatgaaattttatatggacaagtacgggctagacctgccatactccacctacgttaaggatgagcttagatctctagataaaatcaagagagggaagtcacgcttgatagaagctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctactacctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggtttagggctttagaagttgtgttacgggagattgggtaccctgaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaagacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaataacattattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctatcctatcgattgccttgagttggctaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgccaccttcctcaagagagggttcttgccagatcaccagttcccattcttaattcaccctacgatgcccatgaaagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgttccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagcct-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-atta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691643.1_Enterovirus_A71_isolate_02-0-079_complete_genome
-------------------------------ct-gtgggttg-c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc--tc----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctttaacc-actcttgagtgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacatcttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtctcygtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagttccctgatgtactgactgagaccggggtctttggccaaaacgcacagttccactacttatatagatcagggttttgcattcatgtgcagtgtaacgctagcaagttccatcaaggagcgctgttggttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattracgatatgcccccatcaatggatcaatttgcggaccaataactgtgccacaataatagtgccatatatgaatacattaccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccccattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcatatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattctcgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacaatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcttacacacctcctggtggccccttacccaaagaccgggctacagcaatgttgggcacacatgttatctgggattttgggytacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtatttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggatactagtcacatattacagacagcctctattcagggagacagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------ccyacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggatagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttatgcacaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcmgttccgttcatgtcacccgcgagcgcctaccagtggttttatgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtgggatcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccaaccggtgctagtcgtactgctat---yactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcarcttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgcgattgtcaaacaggagtgtattattgcaactccaagagaaaacattatccagttagcttctctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagtgggccactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtgtccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggctagatgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagctcttaggaaccacctcataggatctgatggagcagtagagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaaattcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgtcccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttagaacagtccgctgcctcgcaagaggatcttgaagccatgtttgggaacgtgtcataccttgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctacgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggcaaggacatgtcattgttctgccagatggtgtctaccgtggattttatcccaccaatggcttctcttgaagagaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtatctgactccgacgccattcgacgcaggttttacatggattgcgacattgaggtgacggattcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggcaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgaacgacatcttagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtgcagggtccaagcctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacgacacgcacagcctgggaagactatttgggtggaacacaaacttgtgaacgtccttgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtacagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattattggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactacgcaaaccaacttaaacagttggacataaacactagyaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcattaagaaaagagacattctcaaccccgtgactagggatgtgtctaggatgaaattctatatggacaaatacgggctagacctgccatactccacctacgttaaggatgagcttagatctctagataaaatcaagagagggaagtcacgcttgatagaagctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagatgtgttttggagtaagctgccgatcctactacctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggctttagaagttgtgttacgggagattgggtacccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaagacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaattcaatgatcaataacattattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctatcctatcgattgccttgagttggctaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgccaccttcctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccatgtgcgttccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagcct-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatt-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691646.1_Enterovirus_A71_isolate_02-0-070_complete_genome
-------------------------------------ggttg-c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc--ac----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcgggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgy-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattaaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctttaacc-actcttgagtgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaacaccaactcagccacgg-aaggttccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccccgtcaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagttccactacctatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttggttgctatacttccagaatatgtcatagggacagtggcaggtggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaactgacgatatgcccccatcaatggattaatttgcggaccaataactgtgccacaataatagtgccatacatgaatacattaccttttgactccgccctgaaccactgcaattttggactgctggtggtgcccattagcccattggattttgatcaaggggcaactccggtcatccccattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcatatacctggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggcccatggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcttacacacctcctggtggccccttacccaaagaccgggctacagcaatgttgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtatttgattactataccacgggactagtcagtatmtggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacatcattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctccat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggacagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttatgcacaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcacttttgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttatgacgggtatcccacgtttggagaacacaaacaagagaaagaccttgaatayggagcgtgccctaacaacatgatgggtactttctcggtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagagaaaacactatccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagtgggccactctgagcccggcgactgcgggggcattttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggctagatgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagctcttaggaaccacctcataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatattgttaccctcacagctactttagccctgattggttgtcatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttagaacagtccgctgcctcgcaagaggatcttgaagccatgtttgggaacgtgtcataccttgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctacgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaaatcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggcaaggacatgtcattgttctgccagatggtgtctaccgtggattttatcccaccaatggcttctcttgaagagaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtatctgactccgacgccattcgacgcaggttttacatggattgcgacattgaggtgacggattcatacaaaacagacttgggtagactagatgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggcaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgaacgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtgcagggtccaagcctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagagatcgcttagctgttctcccacggcacgcacagcctggaaagactatttgggtggaacataaacttgtgaacgtcctcgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaatcagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtacagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattattggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtacgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcattaagaaaagagacattctcaaccccgtgactagggatgtgtctaggatgaaattctatatggacaaatacgggctagacctgccatactccacctacgttaaggatgaacttaggtctctagataaaatcaagagagggaagtcacgcctgatagaagctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatyctactacctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaagttgtgttacgggagattgggtacccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaagacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaataacattattattagaaccctcctaattaaaacttttaagggaatagacctggatgagttgaacatggtggcctacggggacgatgtgttggctagttatccctatcccatcgattgccttgagttggctaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacgtgggaaaatgccaccttcctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagcct-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaa----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686270.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/171/2012_complete_genome
-------------------------------------------c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tgtt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctttaacc-actcttgagtgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcacgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactctaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcactacttatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattgacgatatgcccccatcaatggatcaatttgcggaccaacaactgtgccacaataatagtgccatatatgaatacattaccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggactttgaccaaggggcaactccggtcatccccattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccaccccatgtattcatatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcttacacacctcctggtggccccttacccaaagaccgggctacagcaatgttgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtatttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggatactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggacagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactacttcagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagagaaaacactatccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgattgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggctagatgaggaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagctcttaggaaccacctcataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatcgaacaagattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttagaacagtccgctgcctcgcaagaggatcttgaagccatgtttgggaacgtgtcataccttgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggcaaggacatgtcattgttctgccagatggtgtctaccgtggattttatcccaccaatggcttctcttgaagagaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtatctgactccgacgccattcgacgcaggttttacatggactgcgacattgaggtgacggattcatacaagacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggcaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgaacgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtgcagggtccaagcctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcctggaaagactatttgggtggaacacaaacttgtgaacgtcctcgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtacagtatgggttcctaaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcattaagaaaagagacattctcaaccccgtgactagggatgtgtccaggatgaaattctatatggacaaatacgggctagacctgccatactccacctacgttaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaagctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagttgccgatcttactgcctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaagttgtgttacgggagattgggtacccagaagaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaagacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaatattattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691658.1_Enterovirus_A71_isolate_02-0-090_complete_genome
-------------------------------------------c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatr---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacytctg-tttccccggaccgagtatcaatagactgc-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaatcaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctttaacc-actcttgagtgtatattaacccttaatacaatcara-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaactctaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagttccactacttatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcatccgtatgtgctcgatgccgggatccccatatcacaattaacgatatgcccccatcaatggatcaatttgcggaccaataactgtgccacaataatagtgccatatatgaatacattaccttttgactccgccttgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccccattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcatatacccggtgaagtcagaaacctactcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacaggcaagatgctcatagcttacacacctcctggtggccccttacccaaagaccgggctacagcaatgttgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggagtatttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggggcacccaacacagcttacataatagcactggcagcggcccagaagaattttaccatgaaactgtgcaaggatactagccacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggatagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcttaccagtggttttatgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatacggagcgtgccctaataacatgatgggtactttctcggtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactatttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccgaccggtactagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctattagtgtcgtccaccactgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtatattattgtaactccaagagaaaacactacccagttagcttttccaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcgggggcatcctaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggctagatgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagctcttaggaaccacctcataggatctgatggagcagttgagaaaatcctaaaaaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttagaacagtccgctgcctcgcaagaggatctcgaagccatgtttgggaacgtgtcatatcttgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtttatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggcaaggacatgtcattgttctgccagatggtgtctaccgtggattttatcccaccaatggcttctcttgaagagaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacattatagtgcctacagtatctgactccgacgccattcgacgcaggttttacatggactgcgacattgaggtgacggactcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaatactgcaaacttcaaacggtgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggcaacacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgccattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgaacgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagtcgtctcactggtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcccaaacaagtgctcaagaaacccgtcctccgcacggcgacagtgcagggtccaagcctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcctggaaagactatttgggtggaacacaaacttgtgagcgtccttgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagaggcaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtacagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattattggtatccacattggtggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagattcaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggaacctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgattttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcattaagaaaagagacattctcaaccccgtgactagggatgtgtctaggatgaaattctatatggacaaatacgggctagacctgccatactccacctacgttaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaagctagtagtttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtaaccggttcggcagtgggttgtaacccagatgtgttttggagtaagctgccgatcctactgcctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaagttgtgttacgggagattgggtacccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaagacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatcttcaactcaatgatcaataacattattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctatcccatcgattgtcttgagttggctaagactggcaaagagtacggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctctctatgtttgttggcgtggcacaatggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttagccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagcct-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691650.1_Enterovirus_A71_isolate_02-0-072_complete_genome
----------------------------------------tg-c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggkgcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctatcata-----tattta----tttgtt-ggttttgtaccac-----tgacctt--------------aaaatctataacc-actctcgagtgtatattaacccttaatacaatcaaa-----catgggctcacaggtgtctacccaacggtccgggtctcatgaaaactccaactcagccacgg-aaggttccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggtaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaattccaccattaccacacaagaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcagtggataagccaacacgcccagatgtctccgtgaataggttttacacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcactatttatatagatcagggttttgtatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagagtatgtcatagggacagtggcaggcggcacaggaacrg------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattaacgatatgcccccatcaatggatcaatttgcggaccaataactgtgccacaataatagtgccatatatgaatacattacctttcgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccccattacaatcactctagctccaatgtgttctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgacggcgtctcagcacccatcctgccaaatttccatcccactccatgcattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggaaactattcttgaggtcaacaa----------cgtgcctaccaatgctactagtttg------atggaaagactgcgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacaatgctgggccagttgtgtggwtactacacccaatggtcagggtcactagaggtcacttttatgttcaccgggtccttcatggccacgggcaagatgctcatagcttatacacctcctggtggccccttacccaaagaccgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaataccagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggacagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagtttactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtctttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaaacatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctattagtgtcgtccaccactgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagagaaaacactatccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccagtcacacctgatgcttgcagcgggccactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctctgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgacgctgtgtccagggaagttgaagcccttaggagccacctcataggatctgatggggcagttgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggcttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcctaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggatcttgaagccatgtttgggaatgtgtcatacctcgctca---------tttttgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaaatcccttgcgaccggtatcatcgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccatttcgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggtaaggacatgtcattgttctgccagatggtgtccaccgtggattttatcccaccaatggcttctcttgaagaaaagggggtttcatttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtgtctgactccgacgccattcgacgcaggttttacatggactgcgacattgaggtgacggattcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgtagccctctagtgtgtgggaaagctrtccaacttagagacaggaagtccaaggtcaggtacagcgtggacacggtggtctctgaacttattagagaatacaatagcagatctgctataggcaatacaattgaggcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccaaccccagatgctattagtgatctcctcgctagtgtggacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgagcgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtttcactggtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtacagggtccaagtctcgactttgctttatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcatttcaccatgttaggtgtcagggatcgcttagcagttctcccacggcacgcacagcctgggagtactatttgggtggagcacaaacttgtgaacgtcctcgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaagagcagggcaatgtggaggcgtagtcacatcggtcggtaagattgttggtattcacattggtggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacaygagcctgatgaatacgtgacacaagctgccctccactatgcgaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgttatggtactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcatcaagaaaagagacattctcaaccccgtgactagggatgtgtctaagatgaaattctatatggacaagtacgggctagacctgccatactccacctacgttaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttggacacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctactgcctggatcactctttgcctttgactactcaggatatgatgctagcctcagtccagtatggttcagggccttagaagttgtgttacgggagattgggtatccagaggaggccgtatccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacattattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctttcccatcgattgcctcgagttggctaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctacctttctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagagaaatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatctgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308454.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/371/2012_complete_genome
-------------------------------------------c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggttttgtgccac-----tgacctt--------------aaaatctataacc-actctcgagtgtatattaacccttaatacaatcgaa-----catgggctcacaagtgtctactcaacggtccggctctcatgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacacgcccagatgtctctgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaagggatggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttggttgctatacttccagagtatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattaacgatatgcccccatcaatggatcaatttgcggaccaataactgtgccacaataatagtgccatatatgaatacattaccttttgactctgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccccattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgcattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggaaactattcttgaggtcaacaa----------cgtgcccactaatgctactagtttg------atggaaaggctacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcttatacacctcctggtggccccttacccaaagaccgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaacaccagtgatgagagtatgattgagacacggtgtgttcttaactcgcacagtacagcagagaccaccctggacagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagtttactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgctggtaa----ctctattaaaccgaccggtgctagtcgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactggacaaacctcgtttgggaggacagctctcgtgacctattagtgtcgtccaccactgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagagaaaacactatccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggagccacctcataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcagaagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgctgccaagggcttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggatcttgaagccatgtttgggaatgtgtcatacctcgctca---------tttttgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaaatcccttgcgaccggtatcatcgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggtaaggacatgtcattgttctgccagatggtgtctaccgtggattttatcccaccaatggcttctcttgaagaaaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtacctacagtgtctgactccgacgccattcgacgcaggttttacatggactgcgacattgaggtgacggattcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgtagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggttaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggcagtacaattgaggcactattccaaggtccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagtgatctccttgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgagcgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtgcagggtccaagtctcgactttgctctatccctactgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagccgttctcccacggcacgcacagcctgggaagactatctgggtggagcacaaacttgtgaacgtcctcgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcatcaagaaaagagacattctcaaccccgtgactagggatgtgtctaggatgaaattctatatggacaagtacgggctagacctgccatactccacctacgttaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctactgcctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaagttgtgttacgggagattgggtatccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacattattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctttcccatcgattgccttgagttggccaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagagaaatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-tagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691663.1_Enterovirus_A71_isolate_02-0-049_complete_genome
-----------------------------------------------ccactcaca-ggacccac-g-cggtgctagcactctggttccgcgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------attttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccgttgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctatcata-----tatcta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctataacc-actctcgagtgtatattaacccttaatacaatcaaa-----catgggctcacaggtgtctacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggttccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccactattaccacacaggaagcggcaaacatcatagtcggctatggcgaatggccctcatactgctccgatgacgacgctacagcggtggataagccaacacgcccagatgtctctgtgaataggttttacacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcwcagtttcactatttatatagatcagggttttgcatccacgtgcagtgtaacgctagcaagttccaccaaggagcgctgctagttgctatacttccagagtatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggctttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattaacgatatgcccccatcaatggatcaatttgcggaccaataactgtgccacaataatagtgccatacatgaatacattaccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccccattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggaaactattcttgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactgcgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacaatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcacttttatgttcaccgggtccttcatggccacgggcaagatgctcatagcttatacacctcctggtggccccttacccaaagaccgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtgtttgattattataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttacyatgaaactgtgcaaggacactagtcacatattacagacagcttctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcaytcacccgggccctgccggca--------cccacaggacaaaatacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggagcatcatcaaataccagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggacagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatacggagcgtgccctaacaatatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatacatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctattagtgtcgtccaccactgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagagaaaacactatccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagtcgaagcccttaggagccaccttataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctyacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggcttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcctaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggatcttgaagccatgtttgggaatgtgtcatacctcgctca---------tttttgtcgcaaattccaaccactatacgccacagaagctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaaatcccttgcgaccggtatcatcgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggtaaggacatgtcattgttctgccagatggtgtctaccgtggattttatcccaccaatggcttctcttgaagaaaagggggtttcatttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtgtctgactccgacgccattcgacgcaggtttttcatggactgcgacattgaggtgacggattcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgtagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacggtggtctctgaacttattagagaatacaatagcagatctgctataggcaatacaattgaggcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccaaccccagatgcyattagtgatcttctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgagcgacatctcagtagggcagtgctagtyatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtacagggtccaagtctcgactttgctttatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagccgttctcccacggcacgcacagcctgggaagactatttgggtggagcacaaacttgtgaacgtcctcgacgcaatcgaactggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaagagcagggcaatgtggaggcgtggtcacatcagtcggtaagattgttggtattcacattggtggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcatcaagaaaagagacattctcaaccccgtgactagggatgtgtctaggatgaaattctatatggacaagtacgggctagacctgccatactccacctacgttaaggatgagcttaggtctctagacaaaatcaagagagggaagtcacgcctgatagaggctagtagtttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgccaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctactgcctggatcactctttgcctttgactactcaggatatgatgctagcctcagtccagtatggttcagggccttagaagttgtgttacgggagattgggtatccagaggaggccgtatccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgctctggtacttccatctttaattcaatgatcaacaacattattattagaaccctcctaataaagacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctacctttctcaagagagggttcttgccagatcaccagttcccattcttaattcaccctacgatgcccatgagagaaatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691649.1_Enterovirus_A71_isolate_03-0-003_complete_genome
--------------------------------t-gtgggttg-c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tggtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctttaacc-actcttgagtgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggctctactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgacaagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctgaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagacgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagttccactacttatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgctagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattgacgatatgcccccatcaatggatcaatttgcggaccaataactgtgccacaataatagtgccatatatgaatacattaccttttgactccgccctgaaccattgcaattttggactgctggtggtgcccattagcccattggattttgaccaaggggcaactccagtcatccccattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcatatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgaactgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcttacacacctcctggtggccccttacccaaagaccgggctacagcaatgttgggcacacatgttatctgggactttgggctacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtatttgattactacaccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggatactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggacagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaattgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctacatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttatgatgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgtttaaagccaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctattagtgtcgaccaccaccgcccagggctgtgacacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagagaaaacactatccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtggttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggctagatgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagctcttaggaaccacctcataggatctgatggagcagttgagaaaatcctaaagaaccttatyaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattctaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcatygactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttagaacagtccgctgcctcgcaagaggatcttgaagccatgtttgggaatgtgtcataccttgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcgccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggcaaggatatgtcattgttctgccagatggtgtctaccgtggattttatcccgccaatggcttctcttgaagagaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtacctacagtatctgactccgacgccattcgacgcaggttttacatggactgcgacattgaggtgacggattcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggcaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgaacgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaagcccgtcctccgcacggcgacagtgcagggtccaagcctcgactttgctctgtccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcctggaaagactatttgggtggaacacaaacttgtgaacgtcctcgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccctagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtacagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattattggtattcacattggtggcaacgggcgccaagggttctgtgctggcttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccccagattggaggttgactttgagcaagccttgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggtactgagaacttggaagcaatagacctctgtactagtgctggatatccatatagtgcccttggcattaagaaaagagacattctcaaccccgtgactagggatgtgtctaggatgaaattctatatggacaaatacgggttagacctgccttactccacctacgtcaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaagctagtagcttaaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagcaagctgccgatcctactgcctggatcgctctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaagttgtgttacgggagattgggtacccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaagacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacattatcattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctatcccatcgattgccttgagttggctaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagggagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtarggatgaatatgagaaatttgtgagcacaattagatcagtcccagttggaaaagcgttggccattcctaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacaacct-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691644.1_Enterovirus_A71_isolate_03-0-002_complete_genome
-------------------------------------ggttg-c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcataacgcaccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcggcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggttttgtaccac-----tgacctt--------------aaaatctttaacc-actcttgagtgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccattggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaactgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcatccacgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccatatgtgcttgatgctgggatccccatatcacaattgacgatatgcccccatcaatggatcaacttgcggaccaataactgtgccacaataatagtgccatatatgaacacattaccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccccattacaatcactttagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccactgatgatggcgtctcagcacccattctgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccagtgtccgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcttacacacctcctggtggccccttacccaaagaccgggctacagcaatgttgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagcaacacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggtgcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccagca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggacagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggaattcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagttttcgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttatgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtaccctttggtkgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagttctcgtgacctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagagaaaacactacccagttagcttttccaaacccagcctcatatacgtggatgctagcgagtattaccccgctagataccaatcgcacctgatgcttgcagcaggctactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctctgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccacctcataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactttagccttgattggttgccatggaagtccttgggcttggattaaagctaagacagcatccattttaggcatccctatcgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgctaagggcttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcggctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggatcttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccctgatggtaaggacatgtcattgttctgccagatggtatctactgtggactttatcccaccaatggcttctcttgaagagaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtgtctgactccgacgccattcgacgcaggtttttcatggactgcgacattgaggtgacggattcatacaaaacagacttgggcagactagatgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgtagccctttagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacaatagtctctgaacttattagagagtacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgaacgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtttcactggtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcccaagcaagtgcttaagaaacccgtcctccgcacggcgacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaatattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttggctgttctcccacggcacgcacagcctgggaagactatttgggtggagcacaaacttgtgaacgtcctcgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattgataacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgtggaggcgtggtcacatcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccgacttgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggagccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatacccatatagtgcccttggcatcaagaaaagagacattctcaaccccgtgactagggatgtgtctaggatgaaattctatatggacaaatacgggctagacctgccatactccacctacgttaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtgtttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctactgcctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaagttgtgttacgggagattgggtacccggaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacattattattagaaccctcctaataaaaacctttaagggaatagacctagatgagttgaacatggtggcctatggggatgatgtattggctagttatccctttcccattgattgccttgagttggctaagactggcaaagagtatggcctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccatgtgcgctccctgtgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattattct--aa-cggtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatt-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ686192.1_Enterovirus_A71_strain_EV71/Homo_sapiens/VNM/185/2012_complete_genome
-------------------------------------------c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttacaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctttaacc-actcttgagtgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgtccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaatag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgcttgatgctgggatccccatatcacaattgacgatatgcccccatcaatggatcaacttgcggaccaataactgtgccacaataatagtgccatatatgaatacattaccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaaccccggtcatccccattacaatcactttagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttaaccaccgatgacggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggtcagttgtgtggatactacactcaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcttacacacctcctggtggccccttacccaaagaccgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgcttcaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttctcaactcgcacagtacagcagagaccaccctggacagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caatccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcagaattcactttcgttgcgtgcactcctactggtgaggttgttccgcaattactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttgactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagagcacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgatctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagagaaaacactacccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctaatgcttgcagcgggccactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctctgactacattaag-gggctcggtgatgcgtttggaacaggcttcaccgatgccgtgtccagggaagttgaagccctcaggaaccacctcataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggattaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggcttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcggctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggatcttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgcccgggccatagcagataagtatcactctggtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccctgatggtaaggacatgtcattgttctgccagatggtgtctaccgtggactttatcccaccaatggcttctcttgaagagaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtgtctgactccgacgccattcgacgcaggtttttcatggactgcgacattgaggtgacggattcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgtagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagtgtggacacaatagtctctgaacttattagagaatacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgccattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgaacgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaaactctttgcagggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttggctgttctcccacggcacgcacagcctgggaagactatttgggtggagcacaaacttgtgaacgtcctcgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattgataacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgattaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgtggaggcgtggtcacatcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcatcaagaaaagagacattctcaaccccgtgactagggatgtgtctaggatgaaattctatatggacaaatacgggctagacctgccatactccacctacgttaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtgtttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctactgcctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaaattgtgttacgggagattgggtacccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacattattattagaaccctcctaataaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggatgatgtattggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggcctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcctatgagagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctgtgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaggcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgataat-g-acta--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691655.1_Enterovirus_A71_isolate_02-0-083_complete_genome
------------------------------------------------cactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgyg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattact-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctataacc-gctctcgagtgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtccacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggttccactattaattacaccactatcaactactataaggattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacatttttactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcgcaactcaccatcgggaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgataacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttacacattggacaccaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcactatttatatagatcagggttttgtatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattaacgatatgcccccatcaatggatcaacttgcggaccaataactgtgccacaataatagtgccatatatgaatacattgccttttgactccgctctgaaccattgcaattttgggctactggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccccattacaattactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgccaagtggagactattcttgaggtcaacaa----------cgtgcccaccaacgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagatggtccatggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcttatacacctcctggtggccccttacccaaagaccgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcgcccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacataytacagacagcctctattcaaggagacagg--------gtggcagatgtgatcg---agagttctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcactccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcacacagtacrgcagagaccaccctggacagcttcttcagcagagcaggtttagtgggagagatagaccttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttacgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcggttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagagcacaaacaggagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcagtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagcaaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgcactgctat---cactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatccggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctgttagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagagaaagcactatccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccacctcataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcgtccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggcttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttaaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggatcttgaagccatgtttgggaacgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagagaatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttattattagaggctcaccaggcactgggaaatcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggcaaggacatgtcattgttctgccagatggtgtctaccgtggattttatcccaccaatggcttctcttgaagaaaagggggtttcttttacatctaaatttgttattgcatccaccaatgccagcaacatcatagtgcctacagtgtctgactccgacgctattcgacgcaggttttacatggactgcgacattgaggtgacggattcatacaaaacagacttgggtagactagatgctggacgggctgctaagttatgttctgaaaacaacactgcaaacttcaaacggtgtagccctttagtgtgtggaaaagctatccaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaattgcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaaattcagaccaattaggatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagcgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctactaatgttgaacgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactagtgtatgtcatttacaagctctttgcagggtttcaaggtgcgtactctggagctcccaagcaagtgctcaagaaacccgtccttcgcacggcgacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcctgggaagactatttgggtggagcacaaacttgtgaacgtcctcgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattgttggtgttcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaaattggagcctagtgtgttttatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaggtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggtaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttagacataaacactagcaagatgagcatggaagaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggtatcaagaaaagagacattctcaaccccgtgactagggatgtgtctaggatgaaatcctatatggacaaatacgggctagacctgccatactctacctacgttaaggatgagcttaggtctctagataaaatcaagagagggaagtcgcgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgcccatcctactgcctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaaattgtgttacgggagattgggtacccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatttttaactcaatgatcaacaacattattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtctgactatgacgcctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgttggactaaagacgcccgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaacct-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaattg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691662.1_Enterovirus_A71_isolate_02-1-005_complete_genome
-------------------------------------------c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattact-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctataacc-actctcgagtgtatattaaccctcaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaggattcctatgctgcgacagcaggcaaacagagtctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaaatcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttatacattggacaccaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcactatctatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattaacgatatgcccccatcaatggattaacttgcggaccaataactgtgccacaataatagtgccatatatgaatacattaccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccccattacgatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcagttacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgccaagtggagactattcttgaggtcaacaa----------cgtgcccaccaacgctactagtttg------atggaaagactgcgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtgggtactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcttatacacctcctggtggccccttacccaaagaccgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgctcgggatggggtgtttgattactataccacgggattagtcagtatctggtatcaaacgaactacgtggtccctattggagcgcccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagacagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcacacagtacagcagagaccaccctggacagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttacgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcggttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagagcacaaacaggagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagcaaatccaaattacgccggcaa----ctctattaaaccgaccggtgctagtcgcactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatttatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagagaaaacactatccagttagcttttctaagcccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccacctcataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtgattgtgatcaggagtgattatgatatggttaccctcacagctactctagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggcttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggatcttgaagccatgtttgggaacgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgtcctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctatgtcagaaccccgatggcaaggacatgtcattgttctgccagatggtgtctaccgtggattttatcccaccaatggcttctcttgaagaaaagggggtttcttttacatcyaaatttgttatcgcatccaccaacgccagtaacatcatagtgcctacagtgtctgactctgacgccattcgacgcaggttttacatggactgcgacattgaggtgacggattcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgtagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaattgcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcagaccaattaggatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctactaatgttgaacgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactagtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcctaagcaagtgctcaagaaacccgtccttcgcacggcgacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcctgggaagaccatttgggtggagcacaaacttgtgaacatcctcgacgcaattgagttggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagttagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatgggccaactcgcaccaagttggagcctagtgtgttttatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatraatacgtgacgcaagctgccctccactatgcaaaccaacttaaacagttagacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcatcaagaaaagagacattctcaaccccgagactagggatgtgtctaagatgaaattctatatggacaaatacgggctagacctgccatactccacctacgttaaggatgagcttaggtctttagataaaatcaagagagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttatgaggtgtttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctactgcctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaaattgtgttacgggagattgggtacccagaggaggctgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgcgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactctatgattaacaacattattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttraacatggtggcctatggggacgatgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagagagatccatgagtccrttcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggt------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691659.1_Enterovirus_A71_isolate_02-0-065_complete_genome
----------------------------------------------cccactcaca-ggacccac-g-cggtgccagcactctggttccacgggacctttgtgcgcct-g-ttttatr---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtaacaccattgaaactacagagtgtttcgctccaca--cty-ccccc---gtgtagatcaggtcgatgagtcactgca-ayccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggtaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctttaacc-actcttgagtgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtcaccgtccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaattccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggagaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagttccactacttatatagatcaggattttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattgacgatatgcccccatcaatggatcaatttgcggaccaataactgtgccacaataatagtgccatatatgaatacattaccttttgactccgccctgaaccattgcaattttgggctgctggtagtgcccattagcccattggactttgaccaaggggcaactccggtcatccccrttacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcactcagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcatatacccggtgaagtcagaaacttgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcacttttatgttcaccgggtccttcatggccacgggcaagatgctcatagcttacacacctcctggcggccccttacccaaagaccgggctacagcaatgttgggcacacatgttatctgggattttgggttacaatcrtctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggacggggtatttgattactataccacgggattagtcagtatctggtatcaaacraactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggatactagtcacatattacagacagcctctattcagggagataga--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggacagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagttattcacctatatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccacaactactccagtatatgtttgttccccctggtgctcctaaaccgaattctagagaatcacttgcttggcagacagctacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttatgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgtyagaatatatatgagaatgaagcacgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggagccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagagaaaacactatccagttagcttttctaaacccagtctcatatacgtggatgctagcgaatattaccccgctaggtaccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggctagatgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagctcttaggaaccacctcataggatctgatggagcagtwgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctaccttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctatcgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtctagagtggatatccaataaaattagtaagttcattgactggcttagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacgaacttagaacartcckctgcctcgcaagaggatcttgaagccatgtttgggaacgtgtcataccttgctca---------tttctgtcgtaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtaycactctagtgtgtactcactyccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggcaaagacatgtcattgttctgccagatggtgtctaccgtggattttatcccaccaatggcttctcttgaagagaagggggtttcttttacatctaaatttgttatcgcatccacyaacgccagcaacatcatagtgcctacagtatcagactccgacgccattcgacgcaggttttacatggactgcgacattgaggtgacagattcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtatagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggcaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgaacgacatctcagcagggcagtgctagttatgcaatccatcgccactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtgcagggtccaagcctcgactttgctctrtccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcctagctgttctcccacggcacgcacaacctgcaaagactatttgggtggaacacaaacttgtgaatgtcctcgacgcaattgagctggtagatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtacagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattattggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcattaagaaaagagacattctcaaccccgtgactagggatgtgtctagaatgaaattctatatggacaaatacgggttagacctgccatactccacctacgttaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaagctagtagcttgaatgactctgtctacctcagaatgacctttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtattttggagtaagctgccgatcctactgcctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaagttgtgttacgggagattgggtacccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaagacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacattattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctatcccatcgattgccttgagttggctaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagcct-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691647.1_Enterovirus_A71_isolate_02-0-071_complete_genome
-------------------------------------ggttg-c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacatggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--cttcccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctttgatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctttaacc-actcttgagtgtatattaacccttaacacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggtaaacagagcctcaaacaagaccctgacaagtttgctaaccctgtcaaggacattttcactgagatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaacttaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagactggggtctttggccaaaacgcacagtttcactacttatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttataaacaaacacaaccaggcgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattgacgatatgcccccatcaatggatcaatttgcggaccaataactgtgccacaataatagtgccatatatgaatacattaccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccccattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcactcagggctttcccactgaaccaaaaccagggacgaaccagttcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcatatacccggtgaagtcagaaacctactcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgatttccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcaatcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcttacacacctcctggcggtcccttacccaaagaccgggctacagcaatgttgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtatttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaatttcaccatgaaactgtgcaaggatactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggcgacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcggctagacactggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggacagcttcttcagcagagcaggtttggtaggagagatagaccttcctctagagggtaccac-caacccaaatggttatgccaactgggacatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcactttcgttgcgtgcactcctaccggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagtcccgttcatgtcacccgcgagcgcctaccagtggttttatgacgggtatcccacatttggagaacacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaattacttattcaaagccaatccaaattacgccggtaa----ctctatcaaaccgaccggtgctagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcacaatgactgggcaaacctcgtttgggaggacagctctcgtgacctattagtatcgtccaccaccgcccagggctgtgatacaatagcacgttgcgattgtcaaacaggagtgtattattgtaactccaagagaaaacactatccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtggttggtatagtatccacgggtggcaacggactcgttggttttgccgatgtgagggacctcttgtggttagatgaggaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagctcttaggaaccacctcataggatctgatggagcaattgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgacatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgtcccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttagaacagtccgctgcctcgcaagaggatcttgaagccatgtttgggaacgtgtcataccttgctca---------tttctgtcgtaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcgccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggcaaggacatgtcattgttctgccagatggtgtctaccgtggattttatcccaccaatggcttctcttgaagagaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtatctgactccgacgccattcgacgcaggttttacatggactgcgacattgaggtgacggattcatataaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagtgtggacacagtggtctctgaacttattagagaatacaatagcaggtctgctataggcaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgaacgacatctcaacagggcagtgctagttatgcaatccatcgctacagtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcaggatttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtgcagggtccaagcctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcctggaaagactatttgggtggaacacaaacttgtgaacgtcctcgacgcaattgagctggtggatgagcagggcgttaatctggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtacagtatgggttcctgaaccttagtggaaagccaacacatagaaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccagtgggtgaagcctaataaagaaactggtaggctgaacatcaatgggccaactcgcactaagttggagcctagtgtgtttcatgatgtatttgaaggtaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacaygagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacttggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcattaagaaaagagatattctcaaccccgtgactagggatgtgtctaggatgaaattctatatggacaaatacgggctagacctgccatactccacctacgttaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaagctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcttactgcctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaagttgtgttacgggagattgggtacccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaagacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacattattattagaacactcctaataaagacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctttcccattgattgccttgagttggctaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691652.1_Enterovirus_A71_isolate_02-0-060_complete_genome
----------------------------------------------cccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcgccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtrcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aagatctttaacc-actcttaagtgtatattaacccttaatacaatcaag-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgccaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgatgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagttccactacttatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgytgttagttgctatacttccagaatatgtcatagggacagtggcaggcggtacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattgacgatatgcccccatcaatggatcaatttgcggaccaataactgtgctacaataatagtgccatatatgaatacattaccttttgactccgccctgaaccattgcaattttgggctgttggtagtgcctattagcccattggattttgaccaaggggcaactccggtcatccccattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcatatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcttacacacctcctggtggccccttacccaaagaccgggctacagcaatgttgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtatttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggatactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggcg--------cccacaggacaaaatacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacgcggtgcgttcttaactcgcacagtacagcagagaccaccctggacagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggaaatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagttccattcatgtcacccgcgagcgcttaccagtggttttatgacgggtatcccacgtttggagaacacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcagtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgttagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaactacgccggtaa----ttctatcaaaccgaccggtgctagtcgtactgctat---tactaa---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagagaaaacactatccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggctagacgaagaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtatccagggaagttgaagctcttaggaaccacctcataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcgcagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggtatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggtctagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttatccaacttgaagcaattgcca-ttgttagagaaccagatcacaaatttagaacagtccgctgcctcgcaagaggatcttgaagccatgtttgggaacgtgtcataccttgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaaccccgatggcaaggacatgtcattgttctgccagatggtgtctacygtggattttatcccaccaatggcttctcttgaagaraagggggtktcttttacatctaagtttgttatcgcatccaccaacgccagcaacatcatagtacctacagtgtctgactccgacgccattcgacgcaggttttacatggactgcgacattgaggtgacggattcatacaaaacagacttgggtagacttgacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgtagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaattgcagatctgctataggtaatacaattgaagcactattccaaggcccgccyaagttcaggccaattaggatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctactaatgttgaacgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcgctagtgtatgtcatttacaagctctttgcagggtttcaaggtgcgtattcwggagctcccaagcaagtgctcaagaaacccgtccttcgcacagcgacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcctgggaagactatttgggtggagcacaaacttgtgaacgtcctcgacgcaattgagctggtggacgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagacgtcaccaagttcattccagaggcaattagtggagctagtgatgcaaccctagtgatcaatacagaacatatgccatcratgtttgtcccagtgggggacgttgtgcagtatgggttcctgaacctcagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcgagtatgcagggtgagatccagtgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggaacctagtgtgttttatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagatcctaggttggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatatgtgacacaagctgctctccactatgcaaaccaacttaaacagttagacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcatcaagaaaagagatattctcaaccccgagactagggatgtgtctaggatgaaattctatatggacaaatacgggctagacctgccatactccacctacgttaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctactgcctggatcactctttgcctttgactactcaggttatgatgctagcctcagtccagtatggttcagggccttagaaattgtgttacgggagattgggtacccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacattattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctacctttctcaagagagggttcttgccagaccaccarttcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggtaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatt-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691645.1_Enterovirus_A71_isolate_02-1-055_complete_genome
-------------------------------------ggttg-c-acccactcaca-ggacccac-g-cggtgttagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagt------------aatttgcaacact-ggtcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctgatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattact-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-gggtttgtaccac-----tgacctt--------------aaaatctataacc-actctcgattgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcacgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaggattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggctacagtgatcgcgtggcacaactcactatcggaaactccaccattaccacgcaggaagcggcaaacattatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataaaccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcataggaacagtggcaggcggcacaggaacag------aaaacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattaacaatatgcccccatcaatggattaacttgcggaccaataactgtgccacaataatagtgccatatatgaatacattaccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccagtcatccccattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggcttccccactgaaccaaaaccagggacgaaccaattcttaaccactgatgatggcgtctcagcacccatcctgccgaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgccaagtggagactattctcgaggtcaacaa----------cgtgcccaccaacgctactagtttg------atggaaagactgcgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtatttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacacccagtggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcttatacacctcctggtggccccttacccaaagaccgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcgcccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaagctgtgcaaggacactagtcacatattacagacagcctctattcagggagacagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccagca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaggctgctgaaatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcacacagtacagcagagaccaccctggacagtttctttagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttacgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgacgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcactcgcctggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcggttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagagcacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcctcaaagtccaagtaccctctggttgtcagaatatatatgagaatgaaacatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagcaaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgcactgctat---tactac---------------------------------------tcttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgtgacctattagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagaggaaacactatccagttagcttctctaagcccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcgggggcattttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccacctcataggatctgatggagcagttgagaaaatcctaaagaaccttattaaactgatttcagcactagtgattgtgatcaggagtgattatgatatggttaccctcacagctacyttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaaacagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggcttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggatcttgaagccatgtttgggaacgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattatacgccacagaagccaagcgggtctatgttctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtyatggatgatctgtgtcagaaccccgatggcaaggacatgtcattgttctgccagatggtgtctacygtggattttatcccaccaatggcttctcttgaagaraagggggtktcttttacatctaartttgttatcgcatccaccaacgccagcaacatcatagtrccwacagtrtctgactccgacgccattcgacgcaggttttacatggactgcgacattgaggtgacggattcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggcaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---aatcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgaacgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcagggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtgcagggtccaagcctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcctggaaagactatttgggtggaacacaaacttgtgaacgtcctcgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtacagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattattggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcttgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcattaagaaaagagacattctcaaccccgtgactagggatgtgtctaggatgaaattctatatggacaaatacgggctagacctgccatactccacctacgttaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaagctagtagcttgaatgactccgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctactgcctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaagttgtgttacgggagattgggtacccagaggaggccgtgtccctcatagaaggaatcaaccacactcatcacgtctaccggaacaagacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacattattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctatcccatcgattgccttgagctggctaagactggcaaagagtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccatcagttcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagcct-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatt-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691656.1_Enterovirus_A71_isolate_02-0-068_complete_genome
-----------------------------------------g-c-acccactcaca-ggacccac-g-cggtgttagcactctggttccacgggacctttgtgcgcct-g-ttttata---t--cccc---t----ccc-c-----aattt-gtaacttagaagt------------aatttgcaacact-ggtcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattact-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctataacc-actctcgattgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcacgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaggattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggctacagtgatcgcgtggcacaactcactatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataaaccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcactatttatatagatyagggttttgcattcatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggyacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattaacaatatgcccccatcaatggattaacttgcggaccaataattgtgccacaataatagtgccatatatgaatacattaccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggagcaactccggtcatccccattacaatcactttagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggcttccccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccgaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgccaagtggagactattctcgaggtcaacaa----------cgtgcccaccaacgctactagtttg------atggaaagactgcgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtatttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagctgtgtggatactacacccagtggtcagggtcactagaagtcacttttatgttcaccgggtccttcatggccacgggcaagatgctcatagcttatacacctcctggtggccccttacccaaagaccgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagacagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaggctgctgaaatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcacacagtacagcagagaccaccctggacagcttctttagcagagcaggtttggtaggagagatagatcttcctctagagggcaccac-caacccaaatggttatgccaactgggatatagacataactggttacgcgcagatgcgcaggaaagtggagytgttcacctatatgcgctttgacgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcctggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcggttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagagcacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcctcaaagtccaagtaccctctggttgtcagaatatatatgagaatgaaacatgtcagagcatggatacctcgcccgatgcgcaaccagaactacttgttcaaagcaaatccaaattatgccggtaa----ctctattaaaccgaccggtgctagtcgcactgctat---taccac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcaarccttgtttgggaggacagctctcgtgacctattagtgtcgtccaccaccgcccagggctgtgacacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagaggaaacactatccagttagcttctctaagcccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcgggggcattttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttgtggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccacctcataggatctgatggagcaattgagaaaatcctaaagaaccttattaaactgatttcagctctagtgattgtgatcaggagtgattatgatatggytaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaaacagagtgcttcttggctaaagaagttcaatgayatggcgagtgccgccaagggcttagagtggatatccaacaaaataagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggatcttgaggccatgtttgggaacgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtrtgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgcycgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaaccccgatggcaaggacatgtcattgttctgccagatggtgtctaccgtggattttatcccaccaatggcttctcttgaagaaaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagtaacatcatagtacctacagtgtctgactccgacgccattcgacgcaggttttacatggactgcgacattgaggtgacggattcatacaaaacagacttgggtagacttgacgctggacgggctgctaagttatgttctgaaaacaacactgcaaacttcaaacgatgtagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaattgcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcagaccaattaggatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctactaatgttgaacgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcgctagtgtatgtcatttacaagctctttgcagggtttcaaggtgcgtattctggagctcccaagcaagtgctcaagaaacccgtccttcgcacagcgacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcctgggaagactatttgggtggagcacaaacttgtgaacgtccttgacgcaattgagctggtggacgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagacgtcaccaagttcattccagaggcaattagtggagctagtgatgcaaccttagtgatcaatacggaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccagtgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggaacctagtgtgttttatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagatcctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttagacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcatcaagaaaagagacattctcaaccccgagactagggatgtgtctaggatgaaattctatatggacaaatacgggctagacctgccatactccacctacgttaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctactgcctggatcactctttgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaaattgtgttrcgggagattgggtactcagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacatcattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatcccttttccatcgattgcctcgagttggctaagactggcaaagggtatggtctgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagagagatwcatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaratttgtgagtacaattagatcagtcccagttggtaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagttt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU647000.1_Enterovirus_A71_isolate_CQ2014-86_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-acacacggttgaaggagaaagcgttcgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgcgcaatagagctataata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctttaacc-actctcgagtgtatattaacccttaatacagtcaaa-----catgggctcacaagtgtctacccaacggtctggctctcatgaaaactccaactcagccacgg-agggttccaccattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcccctctaaagtcaccatccgctgaagcctgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatattgctctgatgacgacgctacagcggtggataagccaacgcgtccagatgtctccgtgaataggttttatacattggacactaaattatgggaaaagt------------------catctaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcactatctatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggagcag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattgacgatatgcccccatcaatggatcaacttgcggaccaataactgtgccacaataatagtgccatatatgaacacattaccttttgactccgccctgaaccattgcaattttgggctgttggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccccattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcacatacctggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtcctttatggccacgggcaagatgctcatagcttacacacttcctggtggccccttacccaaagaccgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaacactcattacagggtgcatgcccgagatggggtatttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggttcccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatactacagacagcctctattcagggagatagg--------gtggcagatgtgattg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccagca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctagacagcttcttcagcagagcaggcttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggctatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtggggttgttccgcaactactccagtatatgtttgtcccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagctacaaacccttcagtttttgtcaaattaactgaccccccagcacaggtttcagttccgttcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagaacacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaaatccaagtaccctttggttgtcaggatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattgaaccgaccggtactagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgccactcataatgactgggcaaaccttgtttgggaggacagctctcgtgacctattagtgtcgtccactaccgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagagaaaacactatccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattatcctgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggtgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgctgatgtgagggacctcttatggttagacgaagaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccacctcgtaggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatctcagcgctagtaattgtgatcaggagtgattatgatatggttaccctcacagctactttaaccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcaagcgccgccaagggcttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggatcttgaagccatgtttgggaacgtgtcatacctcgctca---------tttctgtcgcaaatttcaaccattatacgccacagaggctaagcgggtctatgtcctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcattagaggctcaccaggcactgggaagtcccttgcgactggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccggaccctgaccattttgacgggtacaagcagcaagtggttacagtcatggatgatctgtgtcagaaccccgatggcaaggacatgtcattgttctgccagatggtgtcgaccgtggatttcatcccaccaatggcttctcttgaagagaagggggtttcttttacatctaaatttgttatcgcatccactaatgccagcaacatcatagtgcctacagtgtctgactccgacgccattcgacgcaggttttacatggactgcgacattgaggtgacggattcatacaaaacagacttgggcagactagacgctggacgggctgctaagttatgctctgaaaacaacactgcaaacttcaaacggtgtagccctctagtgtgtgggaaggctattcaacttagggacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagagtacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaaattcaggccaattagaatc---agtcttgaggagaaaccagccccagatgcgattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcctaccaatgttgaacgacatctcagcagggcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcagggtttcagggcgcatattctggagctcccaagcaagtgctcaagaaacccatcctccgcacggcgacagtacagggtccaagtctcgactttgctctatccttgctgagaagaaacattaggcaagtccaaacagatcaggggcactttaccatgttgggtgtcagggatcgcttagctgttctcccacggcacgctcagcctgggaagactatttgggtggaacacaaacttgtgaacgtcctcgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagacaattagtggagctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtacgggttcctgaaccttagtggaaagccaacacataggactatgatgtataatttccctacaaaagcagggcaatgtggaggcgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaataaagaaactggtaggctgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttgcatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagtaagatgagcatggaggaagcgtgctatggcactgagaacttggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcatcaagaaaagagatattctcaaccccgtgactagggatgtgtctaggatgaaattctatatggacaaatacgggctagacctgccatactccacttacgttaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagatgtgttctggagtaagctgccgatcctactgcctggatcactcttcgcctttgactactcagggtatgatgctagcctcagtccagtatggttcagggccttagaagttgtgttacgggagattgggtacccagaagaggccgtgtctctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacatcattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtttgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagaggattcttgccagactaccagttcccattcttaattcaccccacgatgcccatgagagagatccacgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcgtggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcgttggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaaa---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KR045298.1_Enterovirus_A71_isolate_THA_A1008_polyprotein_gene_complete_cds
----------------------------------------------------------------------------------------------------------------------------cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-ccacacggttgaaggagaaaacgtccgttatccggctaactacttcgagaaacc-cagtagcgccattgaaactgcagagcgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattacg-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctataacc-actctcgagtgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggctccaccattaattacaccactattaactattacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacatcttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtgctgactgagaccggggtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattgacgatatgcccccatcaatggatcaacttgcggaccaataactgcgccacaataatagtgccatatatgaatacactgccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccctattacaatcactctagctccgatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagttta------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctgggagagacggtccgtggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcctatacacctcctggtggccccttacccaaagaccgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaatacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagcatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactagcagcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagatagcgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacgcaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcgtcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggacagtttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatctcgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtatcctttggttatcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaatttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgcgacctattagtgtcgtccaccaccgcccagggctgcgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagaggaaacactatccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactccgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggctttgctgatgtgagggacctcttgtggttagatgaggaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccacctcataggatctgacggagcagttgagaaaatcctaaagaaccttattaagttgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggcttagagtggatatctaacaaaattggtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggatcttgaagccatgtttgggaacgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattatatgccacagaagctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggttcaccaggcactgggaagtcccttgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtattcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaaccccgatggcaaggatatgtcattattctgccagatggtgtccaccgtggattttatcccaccaatggcttctcttgaagaaaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtgtctgactctgacgccatccgacgcaggttttacatggactgcgatattgaggtgacggattcatacaaaacagacttgggtagactggacgctggacgggctgctaagttatgctctgagaacaacactgcaaacttcaaacggtgtagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagtgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaacacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagagaccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggttggatcatccctgaaactcccaccaatgttgaacgacatctcaacagagcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgttatttataagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacattaggcgagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcctgggaagactatttgggtggagcacaaacttgtgaacgtccttgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagtttattccagagacaattagtggcgctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcagtgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttctgtgctggcttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagtctaatagagaaactggtaggctgaacatcaatggaccaactcgcactaaattggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttgcatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggtactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcatcaagaaaagagacattctcaaccccgtaactagggacgtgtctaggatgaaattctatatggacaaatacgggctagacctgccatactccacctacgtgaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctgctgcctggatcactctttgcctttgactactcagggtatgatgctagccttagtccagtatggttcagggccttagaagttgtgttacgggagattgggtacccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaattcaatgatcaacaacatcattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagctatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtttgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccagttcccattcctaattcaccctacgatgcccatgagagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcatggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcactggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-a-a-a-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LK985324.1_Enterovirus_A71_complee_genome_isolate_PAR024102_FRA13
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-ggacccac-g-cggtgctagcactctggttctacggtacctttgtgcgcct-g-ttttacg---t--cccc---t----ccc-c-----gattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattacg-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctataacc-actctcgagtgtatattaacccttaatacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggctccaccattaattacaccactatcaactattacaaagattcctatgctgcgacagcaggtaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacatcttcactgaaatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggttatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtgctgactgagactggggtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggggcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattgacgatatgcccccatcaatggatcaacttgcggaccaataactgcgccacaataatagtgccatatatgaatacactgccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccctattacaatcactctagctccgatgtgttctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaactaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagttta------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctgggagagacggtccgtggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcctatacacctcctggtggccccttacccaaagaccgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaatacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactagtcagcatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactttgcaaggacactagtcacatattacagacagcctctatacagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggggatagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcactccaagccgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggacagtttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatctcgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtatcctttggttatcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaatttcagagtagttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgcgacctattagtgtcgtccaccaccgcccagggctgtgacacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagaggaaacactatccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcggcgggccactccgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggacttgttggctttgctgatgtgagggacctcttgtggttagatgaggaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccacctcataggatctgacggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggattaaagctaagacagcatccattttaggtatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggcttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattacca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggatcttgaagccatgtttgggaacgtgtcatatctcgctca---------tttctgtcgcaaattccaaccattatacgccacagaagctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtattcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaaccccgatggcaaggatatgtcattattctgccagatggtgtccaccgtggattttatcccaccaatggcttctcttgaagaaaaaggggtttcttttacatctaaatttgttatcgcatccaccaacgccagtaatatcatagtgcctacagtgtctgactctgacgccatccgacgcaggttttacatggactgcgatattgaggtgacggattcatacaaaacagacttgggtagactggacgctggacgggctgctaagttatgctctgagaacaacactgcaaacttcaaacggtgtagccctctagtgtgtgggaaagctattcaacttagagataggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggttggatcatccctgaaactcccaccaatgttgaacgacatctcaacagagcagtgctaattatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtacagggtccaagtctcgactttgctctatccctgctgaggagaaacattaggcaagtccaaacagatcagggacattttaccatgttaggtgtcagggatcgcttagctgttctcccacggcacgcacagcctgggaagactatttgggtggagcacaaacttgtgaacgtccttgacgcaattgagctggtggatgagcaaggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagtttattccagagacaattagtggcgctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtacagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcagggcagtgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagtctaatagagaaactggtaggttgaacatcaatggaccaactcgcactaagttggagcctagtgtatttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagcaaagaccctagattggaggtcgactttgagcaagccttgttttccaagtatgtgggcaatgttttgcatgagcctgatgaatacgtgacacaagctgcccttcactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcatcaagaaaagagacattcttaaccccgtaactagggacgtgtctaggatgaaattctatatggacaaatacgggctagacctgccgtactccacctacgtgaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctgctgcctggatcactctttgcctttgactactcagggtatgatgctagccttagtccagtatggttcagggccttagaagttgtgttacgggagattgggtacccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacatccatctttaattcaatgatcaacaacatcattattagaactctcttaataaaaacttttaagggaatagacctggatgagttgaatatggtggcctatggggacgatgtgttggctagctatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtttgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttccttaagagagggttcttgccagaccaccaattcccattcctaattcaccctacgatgcccatgagagagatccatgagtccattcgttggaccaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcatggcacaacggcaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcactggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KR045300.1_Enterovirus_A71_isolate_THA_A1083_polyprotein_gene_complete_cds
--------------------------------------------------------------------------------------------------------------------------------------------------------gtaacttagaagc------------aatttgcaacact-gatcag-tagtaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcgccattgaaattgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattacg-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctataacc-actctcgagtgtatattaacccttaatacaatcaag-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacatcttcactgaaatggctgcccctctaaagtcaccatccgccgaagcttgtggttacagtgatcgcgtggcgcaactcaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggttatggtgaatggccctcgtactgctctgatgtcgacgctacagcggtggacaagccaacgcgcccagatgtctccgtcaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcactatttatatagatcagggttttgcatccatgtgcagtgcaatgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattgacgatatgcccccatcaatggatcaacttgcggaccaataactgcgccacaataatagtgccatatatgaacacactgccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccctattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccaaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgtgctgtgtttagggctgaccctggaagagacggtccgtggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcacttttatgttcaccgggtccttcatggccacgggcaagatgctcatagcctatacacctcctggtggccccttacccaaagaccgagctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaatacccactacagggcgcatgctcgggatggggtgtttgattactataccacgggactaatcagcatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggacagtttcttcagcagagcaggtttggtaggagagatagatcttcccctagagggtaccac-caacccaaatggttatgctaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacatatatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcccaaaccggattctagagaatcacttgcttggcagacagccacaaacccctcagtttttgtcaagttaactgaccccccagcacaggtttcagttccgttcatgtcacccgcgagcgcctaccaatggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatctcgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgagccgtggggtcttcaaagtccaagtatcctttggttatcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctacgtgggcaatttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgcgacctattagtgtcatccaccaccgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagaggaaacactatccagttagcttttcaaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactccgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggctttgctgatgtgagggacctcttgtggttagatgaggaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccacctcataggatctgacggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggcttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggagcagtccgctgcctcacaagaggatcttgaagccatgtttgggaacgtgtcatacctcgccca---------tttctgtcgcaaattccaaccattatatgccacagaagctaagcgggtttatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtattcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaaccccgatggtaaggatatgtcattgttctgccagatggtgtccaccgtggattttatcccaccaatggcttctcttgaagaaaagggggtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtgtctgactctgacgccatccgacgcaggttttacatggactgcgatattgaggtgacggattcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgagaacaacactgcaaacttcaaacggtgtagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggttggatcatccctgaaactcccaccaatgttgaacgacatctcaacagagcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtgcagggtccaagtctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcgcctagctgttctcccacggcacgcacagcctgggaagactatttgggtggagcacaaacttgtgaacgtccttgacgcaattgagctagtggatgagcagggcgttaatttggaactcacattggtaacactagacaccaatgaaaaatttagagatgtcaccaagtttattccagagacaattaatggcgctagtgatgcaaccttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtacagtatgggttcctgaaccttagtggaaagccaacacatagaaccatgatgtataatttccctacaaaagcagggcagtgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagtctaatagagaaactggtagactgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttgcatgagcctgatgaatacgtgacacaagctgccctccactatgcaaaccaacttaaacagttggacataaacactagcaagatgagcatggaggaagcgtgttatggcactgagaacctggaagcaatagatctctgtactagtgctggatacccatatagtgcccttggaatcaagaaaagagacattctcaaccccgtaactagggacgtgtctaggatgaaattctatatggacaaatacgggctagacctgccatactccacctacgtgaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgtctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctatacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctaccgatcctgctgcctggatcactctttgcctttgactactcagggtatgatgctagccttagtccagtatggttcagggccttagaagttgtgttacgggagattgggtacccagaggaggctgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaattcaatgatcaacaacatcattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggtttgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagaggggattcttgccagaccaccagttcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcatggcacaacggtaaggatgaatatgagaaatttgtgagcacaattagatcagtcccagttggaaaagcactggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-c------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KR045301.1_Enterovirus_A71_isolate_THA_A1564_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagtaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacacggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggtaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattacg-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctataacc-actctcgagtatatattaacccttaacacaatcaaa-----catgggctcacaagtgtctactcaacggtccggctctcatgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagtctcaaacaagaccctgataagtttgctaaccctgtcaaggacatcttcactgaaatggctgcccctctaaagtcaccgtccgccgaagcttgtggttacagtgatcgcgtggcgcaactcaccattggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggacaagccaacgcgcccagatgtttccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggggtctttggccaaaacgcacagtttcactatttatatagatcaggattttgcatccatgtgcagtgcaatgctagcaagttccaccaaggagcgctattagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaaccaggtgccgatggttttgagttgcagcacccgtatgtgctcgatgccgggatccccatatcacaattgacgatatgcccccatcaatggatcaacttgcggaccaataactgcgccacaataatagtgccatatatgaacacactgccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccctattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcacccagggctttcccactgaaccgaaaccagggacgaaccaattcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgctactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgtgctgtgtttagggctgaccctggaagagacggtccgtggcagtcaacgatgttgggccagttgtgtggatactacactcaatggtcggggtcactagaggtcacttttatgttcaccgggtccttcatggccacgggcaagatgctcatagcctatacacctcctggtggccccttacccaaagaccgagctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgttacccttgtgataccatggatcagtaatacccactacagggcgcatgcccgggatggggtgtttgattactataccacgggactaatcagcatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaattttaccatgaaactgtgcaaggatactagtcacatactacagacagcctctattcaaggggatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagatagtgtgagtagggcactcacccgggccctgccggcg--------cccacaggacaaaacacacaggtgagcagtcatcgactagacaccggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgtgttcttaactcacacagtacagcagagaccaccctggacagtttcttcagcagagcaggtttggtaggagagatagatcttcccctagagggtaccac-caacccaaatggttatgctaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcactttcgttgcgtgcactcctactggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcccaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtatcccacgtttggagaacacaaacaagagaaagatctcgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtatcctttggttatcagaatatatatgagaatgaagcatgttagagcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattacgccggtaa----ctctattaaaccgaccggtgctagtcgtactgctat---taccac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctacgtgggcaatttcagagtggttaatcgtcaccttgctactcataatgactgggcaaacctcgtttgggaggacagctctcgcgacctattagtgtcatccaccaccgcccagggctgtgatacaattgcacgttgtgattgtcaaacaggagtgtattattgtaactccaagaggaaacactatccagttagcttttctaaacccagcctcatatacgtggatgctagtgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactccgagcccggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtgtccacgggtggcaacgggctcgttggctttgctgatgtgagggacctcttgtggttagatgaggaagccatggagcaaggtgtctccgactacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagcccttaggaaccaccttataggatctgacggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggcttagagtggatatccaacaaaattagtaaattcattgactggcttagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagatcacaaatttggaacagtccgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaaattccaaccattatatgccacagaagctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggcatcattgctcgggccatagcagataagtatcactctagtgtgtattcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatttatgtcagaaccccgatggtaaggatatgtcattgttctgccagatggtgtccaccgtggattttatcccaccaatggcttctcttgaagaaaagggggtttcctttacatctaaatttgttatcgcatccaccaacgccagcaacatcatagtgcctacagtgtctgactctgacgccatccgacgcaggttttacatggactgcgatattgaggtgacggattcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgagaacaacactgcaaacttcaaacggtgtagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaatacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagtgatctcctcgctagtgtagacagtgaggaagtgcgccaatactgt-agggagcaaggttggatcatccctgaaactcccaccaatgttgaacgacatctcaacagagcagtgctagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacggcgacagtacagggtccaagtctcgactttgctctatccctgctgagaagaaacattaggcaagtccaaacagatcaggggcattttaccatgttgggtgtcagggatcgcctagctgttctcccacggcacgcacagcctgggaagactatttgggtggaacacaaacttgtgaacgtccttgacgcaattgagctagtggatgagcagggcgttaatttggaactcacattggtaacactagacactaatgaaaaatttagagatgtcaccaagtttattccagagacaattaatggcgctagtgatgcaaccttagtgatcaatacagaacacatgccatcaatgtttgtcccagtgggggacgttgtacagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacgaaagcaggacagtgtggaggtgtggtcacatcagttggtaagattattggtattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagtctaatagagaaactggtagactgaacatcaatggaccaactcgcactaagttagagcctagtgtgtttcatgatgtgtttgaaggcaacaaggaaccagcggtcttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttgcatgagcctgatgaatacgtgacacaagctgccctccactacgcaaaccaacttaaacagttagacataaacactagcaagatgagcatggaggaagcgtgttatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatatagtgcccttggcatcaagaaaagagacattctcaaccccgtaactagggacgtgtctaggatgaaattctatatggacaaatacgggctagacctgccatactccacctacgtgaaggatgagcttaggtctctagataaaatcaagagagggaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctatacgaagtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgtaacccagacgtgttttggagtaagctgccgatcctgctgcctggatcactctttgcctttgactactcagggtatgatgctagccttagtccagtatggttcagggccttagaagttgtgttacgggagattggatacccagaggaggccgtatccctcatagaaggaatcaaccacactcaccatgtctaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgttctggtacttccatctttaattcaatgatcaataacatcattattagaaccctcctaataaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgttggctagttatccctttcccatcgattgccttgagttggctaagactggcaaagagtatggcttgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagaggggattcttgccagatcaccagttcccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgttggactaaagacgcacgcaatacccaagaccacgtgcgctccctatgtttgttggcatggcacaacggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttggaaaagcactggccattcccaactttgagaatttgagaagaaattggctcgaattatttt--aa-cagtacagytt-------------------------aaag---------------ctgaaccc-cactagaa----a--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP691657.1_Enterovirus_A71_isolate_02-0-023_complete_genome
-----------------------------------------g-c-acccactcaca-ggacccac-g-cggtgctagcactctggttccacgggacctttgtgcgcct-g-ttttatg---t--cccc---t----ccc-c-----aattt-gtaacttagaagc------------aatttgcaacact-gatcag-tagcaggcatagcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacatggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtagcaccattgaaactacagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctttgatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctttaacc-actcttgagtgtatattaacccttaacacaatcaaa-----catgggctcacaagtgtctacccaacggtccggctctcatgaaaactccaactcagccacgg-aaggctccactattaattacaccactatcaactactacaaagattcctatgctgcgacagcaggcaaacagagcctcaaacaagaccctgacaagtttgctaaccctgtcaaggacattttcactgagatggctgcccctctaaagtcaccatccgctgaagcttgtggttacagtgatcgcgtggcacaacttaccatcggaaactccaccattaccacacaggaagcggcaaacatcatagtcggctatggtgaatggccctcatactgctctgatgacgacgctacagcggtggataagccaacgcgcccagatgtctccgtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagactggggtctttggccaaaacgcacagtttcactacttatatagatcagggttttgcatccatgtgcagtgtaacgctagcaagttccaccaaggagcgctgttagttgctatacttccagaatatgtcatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttataaacaaacacaaccaggcgccgacggttttgaattgcagcacccgtatgtgctcgatgccgggatccccatatcacaattgacgatatgcccccatcaatggatcaatttgcggaccaataactgtgccacaataatagtgccatatatgaatacattaccttttgactccgccctgaaccattgcaattttgggctgctggtggtgcccattagcccattggattttgaccaaggggcaactccggtcatccccattacaatcactctagctccaatgtgctctgagtttgctggcctcaggcaggcggtcactcagggctttcccactgaaccaaaaccagggacgaaccagttcttgaccaccgatgatggcgtctcagcacccatcctgccaaatttccatcccactccatgtattcatatacccggtgaagtcagaaacctactcgagttgtgtcaagtggagactattcttgaggtcaacaa----------cgtgcccaccaatgccactagtttg------atggaaagactacgattcccggtgtctgcacaagcgg------ggaaaggtgagttgtgcgctgtgtttagggctgaccctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacacccaatggtcagggtcactagaggtcactttcatgttcaccgggtccttcatggccacgggcaagatgctcatagcttacacacctcctggcggtcccttacccaaagaccgggctacagcaatgttgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggggtatttgattactataccacgggactagtcagtatctggtatcaaacaaactacgtggtccccattggagcacccaacacagcttacataattgcactggcagcggcccagaagaatttcaccatgaaactgtgcaaggatactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcactcacccgggccctgccggca--------cccacaggacaaaacacacaggtgagcagtcatcggctagacactggtgaagttccagcgctccaagctgctgagatcggggcatcatcgaatactagtgatgagagtatgattgagacacggtgcgttcttaactcgcacagtacagcagagaccaccctggacagcttcttcagcagagcaggtttggtaggagagatagatcttcctctagagggtaccac-caacccaaatggttatgccaactgggacatagacatagctggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggagttcacttttgttgcgtgcactcctaccggtgaggttgttccgcaactactccagtatatgtttgttccccctggtgctcctaaaccggattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgaccccccggcacaggtttcagtcccgttcatgtcacccgcgagcgcctaccagtggttttatgacgggtatcccacatttggagaacacaaacaagagaaagatcttgaatacggagcgtgccctaacaacatgatgggcactttctcggtgcgaaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagagcatggatacctcgcccgatgcgcaaccaaaattacttattcaaagccaatccaaattacgccggtaa----ctctatcaaaccgaccggtgctagtcgtactgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagagtggttaatcgtcaccttgctactcacaatgactgggcaaacctcgtttgggaggacagctctcgtgacctattagtatcgtccaccaccgcccagggctgtgatacaattgcacgttgcgattgtcaaacaggagtgtattattgtaactccaagagaaaacactatccagttagcttttctaaacccagcctcatatacgtggatgctagcgaatattaccccgctagataccaatcgcacctgatgcttgcagcgggccactctgagccyggcgactgcgggggcatcttaaggtgccaacatggtgtagttggtatagtatccacgggtggcaacggactcgttggttttgccgatgtgagggacctcttgtggttagatgaggaagccatggagcaaggtgtctccgattacattaag-gggctcggtgatgcgtttgggacaggcttcaccgatgctgtgtccagggaagttgaagctcttaggaaccacctcataggatctgatggagcagttgagaaaatcctaaagaaycttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgacatggttaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagctaagacagcatccattttaggcatccctattgcccagaagcagagtgcttcttggctaaagaagttcaacgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagagagaagattgtcccagcagctagagagaaagcagaattcttaaccaacttgaagcaattgcca-ctgttagagaaccagattacaaatttagaacagtctgctgcctcgcaagaggatcttgaagccatgtttgggaacgtgtcataccttgctca---------tttctgtcgtaaattccaaccattatacgccacagaggctaagcgggtctatgttctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcrccaggcactgggaagtccctygcgaccggyatcattgctcgggccatagcagayaagtatcactctagtgtgtaytcacttccaccagaccctgaccattttgaygggtacaaacagcaagtggttacagtyatggatgatctgtgtcagaaycccgayggcaaggayatgtcattrttctgccagatggtgtcyacygtggattttatcccaccaatggcttctcttgaagagaagggrgtttcttttacatctaaatttgttatcgcatccaccaacgccagcaacatyatagtgcctacagtgtctgactctgacgccattcgacgcaggtttttcatggactgcgacattgaagtgacggattcatacaagacagaattgggtagactagatgctggacgggctgctaagttatgctctgaaaataacactgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctataggtaacacaattgaagcactattccaaggcccgcccaagttcagaccaattagaatc---agtcttgaggagaagccagctccagatgctatcagtgacctcctcgctagtgttgacagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccaccaatgtcgaacgacatctcaacagagcagtgctagttatgcaatccatcgccactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcgggatttcaaggcgcgtattccggggctcccaagcaagtgctcaagaaacccgtcctccgcaccgcaacagtacagggtccaagtctcgactttgctttatccctgctgagaagaaacattaggcaagtccaaacagaccaggggcattttaccatgttaggtgtcagggaccgtttagctgttctcccacggcacgcacaacccgggaagactatttgggtggaacacaaacttgtgaacgtccttgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtgacactagacaccaatgaaaaatttagagatgtcaccaagttcattccagagaccattagtggagctagtgatgcaactttggtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtatgggttcctgaaccttagtggaaagccaacacataggaccatgatgtataatttccctacaaaagcaggacaatgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttttgtgctggtttgaagaggagttactttgcaagtacacagggtgagatccaatgggtgaaacccaataaagaaactggtaggctgaacatcaatggacctactcacactaagctggagcctagtgtgtttcatgatgtgtttgaaggcaataaggaaccagcggtcctaacaagtaaagaccctagactggaggtcgactttgagcaggccctgttttccaagtatgtgggcaatgttttgcatgagcctgatgaatacgtgacacaagctgccctccactacgcgaatcaactaaagcagctggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagatctctgtactagtgctggatatccatacagcgcccttggcatcaggaaaagagacattctcaaccctgtaactagggatgtgtctaagatgaaactctatatggacaagtacgggttagacctgccatactccacctacgtgaaggatgagcttagatctctggataaaatcaagaaagggaagtcacgcctgatagaggctagtagcttaaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagtaagctgccgatcctactgcctggagcactctttgcctttgactactcagggtatgacgctagcctcagcccggtatggttcagggccttagaaattgtgttacgggaaattgggtatccagaggaggccgtgtccctcatagaaggaatcaaccacactcaccacgtctaccggaacaaaacatactgtgtacttggtggaatgccctcagggtgctctggtacttccatctttaactcaatgatcaacaacatcattattagaacccttctaataaagacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgacgtgttggctagttatccctttcccattgattgccttgagttggctaagactggcaaagagtatggtttgactatgacacctgctgacaaatcaccttgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccaattcccgttcttaattcaccctacgatgcccatgagagagatccatgagtccattcggtggactaaagacgcacgcaatacccaagatcacgtgcgctccctgtgtctgttggcatggcataacggcaaggatgaatatgagaaatttgtgagcgcaattagatcagtcccagttggaaaagcattggccattcctaactttgagaatctgagaagaaattggctcgagttatttt--aa-cagtacagctt-------------------------aaag---------------ctgaaccc-cactagaa----gtctggt------c-g-----tgttaat-g-acta--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU574619.1_Enterovirus_A71_isolate_EV-A71/PMKA1300/THA/2011_polyprotein_gene_complete_cds
----------------------------------aggggttg-c-acccactcaca-ggacccac-g-cggtgctagcactctggttctacggaacccttgtgcgcct-g-ttttaca---c--c-cc---a----ccc-c-----aactt-gtaacttagaagc------------aattcacaacact-gatcaa-tagtaggcgtggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtaacgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctctcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaatcact-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctacaacc-actctcaactatatattaacccttaatacaatcaaa-----catgggctcacaggtgtccactcaacgatccggctcccatgaaaactccaattcagctacgg-aaggctccaccattaattacaccaccattaactattacaaagattcttatgctgcgacagcgggcaaacagagcctcaaacaggaccctgataagtttgctaaccctgtcaaggatattttcactgaaatggctgcgcctctgaaatctccatctgctgaagcttgtggttacagtgatcgcgtggcacaactcaccattggaaattccaccattactacacaggaagcagcaaacatcatagtcggctatggggaatggccctcgtactgctccgatgatgacgctacagcggtggataagccaacacgcccagatgtttccgtgaacaggttttatacattagacactaaactgtgggaaaagt------------------catccaagggatggtattggaagtttcctgatgtattgactgagaccggagtctttggccaaaacgcacagtttcactatttatataggtcagggttttgcatccatgtgcaatgcaacgctagcaagttccatcaaggagcgctgttagtcgccatacttccagagtatgtcatagggacagtggcaggtggtacaggaacag------aggatagccaccccccttacaaacagacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgctgggatccctatatcacaattgacgatatgcccccatcaatggattaacttgaggaccaacaactgtgccacaataatagtgccatatatgaatacactgccttttgactccgccctgaaccattgcaattttgggttgttagtagtgcccattagcccattggattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtcttaggcaagcagtcactcaaggctttcccactgaaccaaaaccagggacgaaccaattcttgaccactgatgatggcgtctcagcacccatactgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctactagtttg------atggaaaggctacgatttccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgctgtatttagggctgatcctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcagtggtcagggtcattggaggttacttttatgttcaccgggtcttttatggccacgggtaagatgctcatagcttatacacctcctggcggccccttacccaaagatcgggccacagcaatgctgggcacacatgttatctgggattttgggctgcaatcatctgtcactcttgtgataccatggatcagtaacacccactacagggcgcacgcccgggatggagtgttcgactactacaccacaggactggtcagtatctggtatcaaacaaattacgtagtcccaattggagcgcccaacacagcttacataatagcactggcggcggcccagaagaatttcaccatgaaactgtgcaaagatactagtcacatattacagacagcctctattcagggagatagg--------gtagcagacgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcgctcacccgggccctgccagca--------cccacaggtcaaaacacacaggtgagcagccatcgattagacaccggtgaagttccagcactccaagctgctgagatcggggcatcatcaaatactagtgatgagagtatgattgagacacgatgtgtccttaactcacacagtacagcagagactaccctggacagttttttcagcagagcaggtttggtaggagagatagatctccccctagagggtaccac-caatccaaatggttatgccaactgggatatagacataactggttacgcacaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggaattcactttcgttgcgtgcactcctactggtgaggttgttccacagttactccagtacatgtttgttccccctggtgctcctaaaccagattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctatcagtggttttacgacgggtaccccacatttggagaacacaaacaggagaaagatcttgaatatggagcgtgtcctaataacatgatgggcactttctcggtgaggaccgtggggtcttcaaagtccaagtaccctttggttatcagaatatacatgagaatgaagcatgtcagggcatggatacctcgcccgatgcgcaaccaaaattatttgttcaaagccaatcccaattatgccggtaa----ctccatcaagccgaccggtgctagtcgtaccgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcagtctggggccatctacgtgggcaacttcagagtggttaatcgtcaccttgctacccataatgactgggcaaacctcgtttgggaagatagctcccgcgacctgttagtgtcgtccaccaccgcccagggctgtgatactattgcacgttgtaactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttttctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcacacctgatgctcgcagcgggccactctgagcccggcgactgcggaggcatcttaaggtgccatcatggtgtagttggtatagtgtctacaggtggcaatggactcgttggttttgctgatgtgagggatctcctatggttagatgaggaagccatggagcaaggtgtctctgactacatcaag-gggcttggtgacgcgtttgggacaggcttcaccgatgctgtatccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaattctaaagaacctcattaagttgatttcagcgttagtaattgtgatcaggagtgattatgacatggtcaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcatccccatagcccagaagcagagtgcttcttggctaaagaagtttaatgatatggcgagcgccgccaagggcttagagtggatatctaacaaaattagcaaattcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattacca-ctgctagagaaccagatcacaaacttagaacagtccgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcatatctcgctca---------tttctgccgcaagtaccaaccgttatacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcattagaggttcaccaggcactgggaagtcccttgcgaccggtatcatcgctcgggccatagcagataagtaccattctagtgtgtactcgctaccaccagaccctgatcattttgacgggtataaacagcaagtggttacagttatggatgatctgtgtcagaatcccgacggcaaggacatgtcactattttgtcagatggtgtccaccgtggatttcatccccccaatggcttctcttgaagaaaagggagtttcttttacatctaaatttgttatcgcatccactaactccagcaatattatagtgcctacagtgtctgactccgacgccatccgacgcaggttttatatggattgcgacattgaggtgacggactcatacaaaacagacttgggcagattagatgctggacgggccgctaagttatgctctgaaaacaacaccgcaaacttcaagcgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtatagcgtggacacagtggtctctgaacttattagagaatacaatagcagatctgctattggcaacacaattgaagcactattccaaggcccgcccaaatttaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagcgatctcctcgccagtgtagacagcgaggaagtgcgccaatactgt-agggaacaaggttggatcatccctgaaacccccactaatgttgaacgacatctcaacagagcagtactagttatgcaatccatcgctactgtggtggcagttgtctcactagtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaggaaacccgtcctccgcacggcaacagtgcagggtccaagtcttgactttgctctatctctgctgagaagaaacatcaggcaagtccaaacagaccaggggcattttaccatgttaggtgtcagggatcacttagctgtcctcccccggcacgcacagcccgggaagactatttgggtggagcacaagcttgtgaacgtcctagacgcagtcgagctggtggatgaacagggtgttaatttggaactcacattggtgacactagacaccaatgaaaaattcagagatatcaccaagttcattccagagaccattagtggcgctagtgatgcaactttagtgatcaatacagaacatatgccatcaatgtttgtcccagtaggagacgtcgtacagtatgggttcttgaacctcagtggaaagccaacgcacagaaccatgatgtacaatttccctacaaaagcagggcaatgcggaggtgtagtcacatcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttctgtgctggcttaaagaggagttacttcgcaagtgtgcagggtgagatccaatgggtgaagtctaacaaagaaaccggtagactgagtatcaatggaccaactcgcactaagctggagcctagtgtgtttcatgatgtgtttgaaggcagtaaggaaccagcggtcttaacaagtaaggaccctagattggaggtcgactttgagcaggctctgttttccaagtatgtgggcaatgttttacatgagcccgatgagtacgtgactcaagctgccctccactatgcgaaccagctcaaacaattggacatagacactagcaagatgagcatggaggaggcgtgctatggcactgagaacctggaagcaatagacctctgtactagtgccggatacccatatagcgcccttggcatcaagaaaagagatattctcgaccccgtaactagggatgtgtccaagatgaaattctatatggacaagtatggactagatctgccatactccacctatgtgaaggatgagcttaggcctctggataaaatcaagaagggaaagtcacgcctgatagaggctagtagcttaaatgactctgtctacctcagaatgactttcggacacctttacgaggtatttcatgccaaccctggcactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagcaaactgccgatcctactgcctgggtcactctttgcctttgactactcgggatatgatgctagtctcagcccggtatggttcagggccctagaggttgtgctacgggaaattgggtatacagaggaggccgtgtctctaatagaaggaatcaaccacacccaccacgtataccggaataaaacatactgtgtacttggtgggatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacatcatcattaggaccctcttaatcaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgctggctagttatccttttcctatcgattgccttgaattggccaagactggtaaagagtatggtttgactatgacacctgcagataaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttcctcaagagagggttctcgccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcacgcaacacccaagatcatgtgcgctccttgtgtctgttggcatggcacaatggcaaggatgaatatgagaaatttgtgagtacaatcagatcagttccagttggaaaagcgttggccatccctagttttgagaatttgagaagaaattggctcgaattatttt--aa-tattacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----cgttaat-g-ac------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP308448.1_Enterovirus_A71_strain_EV71/Homo_sapiens/KHM/274/2012_partial_genome
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtaacgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctctcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaatcact-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctacaacc-actctcaactatatattaacccttaatacaatcaaa-----catgggctcacaggtgtccactcaacgatccggctcccatgaaaactccaattcagctacgg-aaggctccaccattaattacaccaccattaactattacaaagattcttatgctgcgacagcgggcaaacagagcctcaaacaggaccctgataagtttgctaaccctgtcaaggatattttcactgaaatggctgcgcctctgaaatctccatctgctgaagcttgtggttacagtgatcgcgtggcacaactcaccattggaaattccaccattactacacaggaagcagcaaacatcatagtcggctatggggaatggccctcatactgctccgatgatgacgctacagcggtagataagccaacacgcccagatgtttccgtgaacaggttttatacattagacactaaactgtgggaaaagt------------------catccaagggatggtattggaagtttcctgatgtattgactgagaccggagtctttggccaaaacgcgcagtttcactatttatataggtcagggttttgcatccatgtgcaatgcaacgctagcaagttccatcaaggagcgctgttagtcgccatacttccagagtatgtcatagggacagtggcaggtggtacaggaacag------aggatagccaccccccttacaaacagacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgctgggatccctatatcacaattgacgatatgcccccatcaatggattaacttgaggaccaacaactgtgccacaataatagtgccatatatgaatacactgccttttgactccgctctgaaccattgcaattttgggttgttagtagtgcccattagcccattggactttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtcttaggcaagcagtcactcaaggctttcccactgagccaaaaccagggacgaaccaattcttgaccactgatgatggcgtctcagcacccatactgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctactagtttg------atggaaagactacgatttccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgctgtatttagggctgatcctggaagagacggtccatggcagtcaacgatgctgggccagttgtgcggatactacactcagtggtcaggatcattggaggttacttttatgttcaccgggtcttttatggccacgggtaagatgcttatagcttatacacctcctggcggccccttacccaaagatcgggccacagcaatgctgggcacacatgttatctgggattttgggctgcaatcatctgtcactcttgtgataccatggatcagtaacacccactacagggcgcacgcccgggatggagtgttcgactactacaccacaggactggtcagtatctggtatcaaacaaattacgtagtcccaattggagcgcccaacacagcctacataatagcactggcggcggcccagaagaatttcaccatgaaactgtgcaaagatactagtcacatattacagacagcctctattcagggagatagg--------gtagcagacgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcgctcacccgggccctgccagca--------cccacaggtcaaaacacacaggtgagcagccatcgattagacaccggtgaagttccagcactccaagctgctgagatcggggcatcatcaaatactagtgatgagagcatgattgagacacgatgtgtccttaactcacacagtacagcagagactaccttggacagttttttcagcagagcaggtttggtaggagagatagatctccccctagagggtaccac-caatccaaatggttacgccaactgggatatagacataactggttacgcacaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggaattcactttcgttgcgtgcactcctactggtgaggttgttccacagttactccagtacatgtttgttccccctggtgctcctaaaccagattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctatcagtggttttacgacgggtaccccacatttggagagcacaaacaggagaaagatcttgaatatggagcgtgtcctaataacatgatgggcactttctcggtgaggaccgtggggtcttcaaagtccaagtaccctttggttatcagaatatacatgagaatgaagcatgtcagggcatggatacctcgcccgatgcgcaaccaaaattatttgttcaaagccaatcccaattatgccggtaa----ctctatcaagccgaccggtgctagtcgtaccgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcagtctggggccatctacgtgggcaacttcagagtggttaatcgtcaccttgctacccataatgactgggcaaacctcgtttgggaagatagctcccgcgacctgttagtgtcgtccaccaccgcccagggctgtgatattattgcacgttgtaactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttttctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcacacctgatgctcgcagcgggccactctgagcccggcgactgcggaggcatcttaaggtgccatcatggtgtagttggtatagtgtctacaggtggcaatggactcgttggttttgctgatgtgagggatcttctatggttagatgaggaagccatggagcaaggtgtctctgattacatcaaa-gggcttggtgacgcgtttgggacaggcttcaccgatgctgtatccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaattctaaagaacctcattaagttgatttcagcgttagtaattgtgatcaggagtgattacgacatggtcaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcatccccatagcccagaagcagagtgcttcttggttaaagaagttcaatgatatggcgagcgccgccaagggcttagagtggatatctaacaaaattagcaaattcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattacca-ctgctagagaaccagatcacaaacttagaacagtccgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcatatctcgctca---------tttctgccgcaagtaccaaccgttatacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcattagaggttcaccaggcactgggaagtcccttgcgaccggtatcatcgctcgggccatagcagataagtaccattctagtgtgtactcgctaccaccagaccctgatcattttgacgggtataaacagcaagtggttacagtcatggatgatctgtgccagaatcccgacggcaaggacatgtcactattttgtcagatggtgtccaccgtggatttcatccctccaatggcttctcttgaagaaaagggagtttcttttacatctaaatttgttatcgcatccactaactccagcaatattatagtgcctacagtgtctgactccgacgccatccgacgcaggttttatatggattgcgacattgaggtgacggactcatacaaaacagacttgggcagattagatgctggacgggccgctaagttatgctctgaaaacaacaccgcaaacttcaagcgatgcagccctctagtgtgtgggaaagctgttcaactcagagacaggaagtccaaggtcaggtatagcgtggacacagtggtctctgaacttattagagaatacaatagcagagctgctattggcaacacaattgaagcactattccaaggcccgcccaaatttaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagcgatctcctcgccagtgtagacagcgaggaagtgcgccaatactgt-agggaacaaggttggatcatccctgaaacccccactaatgttgaacgacatctcaacagagcagtactagttatgcagtccatcgctactgtggtggcagttgtctcactagtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaggaaacccgtcctccgcacagcaacagtgcagggtccaagtcttgactttgccctatctttgctgagaagaaacatcaggcaagtccaaacagaccaggggcattttaccatgttaggtgtcagggatcacttagctgtcctcccccggcacgcacagcccgggaagactatttgggtggagcacaagcttgtgaacgtcctagacgcagtcgagctggtggatgaacagggtgttaatttggaactcacattggtgacactagacactaatgaaaaattcagagatatcaccaagttcattccagagaccattagtggcgctagtgatgcaactttagtgatcaatacagaacatatgccatcaatgtttgtcccagtaggagacgtcgtacagtatgggttcttgaacctcagtggaaagccaacgcacagaaccatgatgtacaattttcctacaaaagcaggacaatgcggaggtgtagtcacatcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttctgtgctggcttaaagaggagttacttcgcaagtgtgcagggtgagattcaatgggtgaagcctaacaaagaaaccggtaggctgagtatcaatggaccaactcgcactaagctggagcctagtgtgtttcatgatgtgtttgaaggcagtaaggaaccagcggtcttaacaagtaaggaccctagattggaggtcgactttgagcaggctctgttttccaagtatgtgggcaatgttttacatgagcccgatgagtacgtgactcaagctgccctccactatgcgaaccagctcaaacaattggacatagacactagcaagatgagcatggaggaggcgtgctatggcactgagaacctggaagcaatagacctctgtactagtgccggatacccatatagcgcccttggcatcaagaaaagagatattctcgaccccgtaactagagatgtgtccaagatgaaattctatatggacaagtatggactagatctgccatactccacctatgtgaaggatgagcttagacctctggataaaatcaagaagggaaagtcacgcctgatagaggctagtagcttaaacgattctgtctacctcagaatgactttcggacacctttacgaggtatttcatgccaaccctggcactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagcaagctgccgatcctactgcctgggtcactctttgcctttgactactcgggatatgatgctagtctcagcccggtatggttcagggccctagaggttgtgctacgggaaattgggtatacagaggaggccgtgtctctaatagaaggaatcaaccacacccaccacgtataccggaataaaacatactgtgtacttggtgggatgccctcagggtgttctggtacttccatctttaactcaatgatcaacaacatcatcattagggccctcttaatcaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgctggctagttatccttttcctatcgattgccttgaattggccaagactggtaaagagtatggtttgactatgacacctgcagataaatcaccctgttttaatgaagtgacatgggaaaatgctaccttcctcaagagagggttcttgccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggacta---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JF738001.1_Human_enterovirus_71_isolate_THA-EV71-019_complete_genome
------------------------------------------------------------------------------------------------------------------------------cc---a----ccc-c-----aattt-gcaacttagaagc------------gattcacaacact-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtaacgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacgtggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcatattggctgcttatggtgacaatcact-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctataata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctgtaacc-actctcaactatatattaacccttaatacaatcaaa-----catgggctcacaggtgtccactcaacgatccggctcccatgaaaactccaattcagctacgg-aaggctccaccattaattacaccaccattaactattataaagattcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcgcctctaaaatctccatctgctgaagcttgtggttacagtgatcgcgtggcacaactcaccatcggaaactccaccattactacacaggaagcggcaaacatcatagtcggctatggggaatggccctcgtactgctccgatgatgacgctacagcggtggataagccaacgcgcccagatgtttccgtgaataggttttatacattggacactaaactgtgggaaaagt------------------catccaagggatggtattggaagtttcctgatgtattgactgagaccggagtcttcggccaaaacgcacagtttcactatttatataggtcagggttttgcatccatgtgcaatgcaacgctagcaagttccaccaaggagcgctgttagtcgccatacttccagagtatgttatagggacagtggcaggtggtacaggaacag------aggacagccaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgctgggatccctatatcacaattgacgatatgcccccatcaatggattaacctgcggaccaataactgtgccacaataatagtgccatatatgaatacactgccttttgactccgccctgaaccattgcaattttgggttgttagtagtgcccattagcccattggattttgaccaaggggcaactccggttatccctattacaatcactttagctccaatgtgctctgagtttgctggtcttaggcaagcagtcactcaaggctttcccactgagccaaaaccagggacgaaccaattcttgaccactgatgatggcgtctcagcacccatactgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctactagtttg------atggaaaggatacgattcccggtgtcagcgcaagcag------ggaagggtgaattgtgtgcggtgttcagagccgaccctgggcgaaatggtccatggcagtctaccttgttgggccagttgtgtgggtattacactcaatggtcaggatcactggaagttacgttcatgttcactgggtcctttatggccactggcaagatgcttatagcctatacaccaccaggaggccctctgcccaaagatcgagcgaccgccatgttgggtacgcatgttatttgggactttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacacccactacagagcacatgctcgagatggagtattcgactactacactacaggcttagttagtatatggtatcagacgaattatgtggttccaattggagcacccaacacagcctatataatagcactagcggcggcccagaagaattttaccatgaaactgtgcaaagacactagccacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcgctcacccgggccctgccagca--------cccacaggtcaaaacacacaggtgagcagccatcgattagacaccggtgaagttccagcactccaagctgctgagatcggggcatcatcaaatactagtgatgagagtatgattgagacacgatgtgtccttaactcacacagtacagcagagactaccctggacagtttcttcagcagagcaggtttggtaggagagatagatctccccctagagggtaccac-caatccaaatggttatgccaattgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggaattcactttcgttgcgtgcactcccactggtgaggttgttccacaattactccagtatatgtttgttccccctggtgctcctaaaccagattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgttaagttaactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggagaaagatcttgaatatggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatacatgagaatgaagcatgtcagggcatggatacctcgcccgatgcgcaaccaaaattatttgttcaaagccaatccaaattatgctggcaa----ctccattaagccgaccggtactagtcgtaccgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcagtctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctacccataatgactgggcaaacctcgtttgggaagacagctcccgcgacctgttagtgtcgtccaccaccgcccagggttgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttttctaaacccagcctcatatatgtggaagctagcgagtattaccctgccagataccaatcacacctgatgctcgcagcgggccactctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtgtccacgggtggcaatggactcgttggttttgctgacgtgagggatctcttatggttagatgaagaagccatggagcaaggtgtctctgactacattaag-gggcttggtgacgcgtttgggacaggcttcacagatgctgtatccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaatcctaaagaacctcattaagttgatttcagcgttagtaattgtgatcaggagcgattatgatatggtcaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcatccccattgcccagaagcagagtgcttcttggctaaagaaattcaatgacatggcgagcgccgccaagggtttagagtggatatccaacaaaattagcaaattcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattacca-ctgctagagaaccagatcacaaatttagaacagtccgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgccgcaagttccaaccattatacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctctccaggcactgggaagtcccttgcgaccggcatcattgctcgggccatagcagataagtaccactctagtgtgtactcactaccaccagaccctgatcattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaatcccgacggcaaggacatgtcactattttgccagatggtgtccactgtggattttatccccccaatggcttctcttgaagaaaagggagtttcttttacatctaaattcgttatcgcatccaccaactccagcaacattatagtgcctacagtgtctgactccgacgccatccgacgcaggttttatatggattgcgacattgaggtgacggactcatacaaaacagacttgggtagattagatgctggacgggctgctaagttatgctctgaaaacaacaccgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcaggtctgctattggcaacacaattgaagcactattccaaggcccgcccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagcgatctcctcgccagtgtagacagcgaggaagtgcgccaatactgt-agggaacaaggttggatcatccctgaaactcccattaatgttgagcgacatctcaacagagcagtactagtcatgcaatccatcgctactgtggtggcagttgtctcactagtgtatgtcatttacaagctctttgcggggtttcaaggtgcgtattctggagctcccaagcaagtgctcaggaaacccgtcctccgcacggcaacagtgcagggtccaagtcttgactttgctctatctctgctgagaagaaacatcaggcaagtccaaacagaccaggggcattttaccatgttaggtgtcagggatcacttagctgtcctcccccggcacgcacagcctgggaagactatttgggtggagcacaaactcgtgaacgtcctcgacgcagtcgagctggtggatgaacagggtgtcaatttggaactcacattggtgacactagacactaatgaaaaatttagagatatcaccaagttcattccagagaccatcagtggcgctagtgatgcaactttagtgatcaatacagaacatatgccatcaatgtttgtcccagtaggagacgtcgtacagtatgggttcttgaatctcagtggaaagccaacgcacagaaccatgatgtacaatttccctacaaaagcaggacaatgtggaggtgtagtcacatcagtcggtaagattgttggcattcacattggcggcaatgggcgccaagggttctgtgctggtttaaagaggagttacttcgcaagtgtgcagggtgagatccaatgggtgaagtctaacaaagaaaccggtagactgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttaaaggcagtaaggaaccagcagtcttaacaagtaaggaccctagattggaggtcgactttgagcaggctctgttttccaagtatgtgggcaatgttttacatgagcccgatgaatacgtgactcaagctgccctccactatgcgaaccagctcaaacaattggacataaacactagcaagatgagcatggaggaggcgtgctatggcactgagaacctggaagcaatagacctctgtactagtgccggatacccatacagcgcccttggcatcaagaaaagagatattctcgatcccgtaaccagggatgtgtctaagatgaaattttatatggataaatatgggctagatctgccatactccacctacgtgaaggatgagcttaggcctctggataaaatcaagaagggaaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgactttcgggcacctttacgaggtatttcatgccaaccctggcactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagcaagctgccgatcctactgcctgggtcactctttgcctttgactactcaggatatgatgctagcctcagcccggtatggttcagggccctagaagttgtgttacgggaaattgggtatacagaggaggccgtgtctctaatagaaggaatcaaccacacccaccatgtgtaccggaacaaaacatactgtgtacttggtgggatgccctcggggtgttctggtacttccatctttaactcaatgatcaacaacatcatcattaggaccctcttaattaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgctggctagttatccttttcctatcgattgccttgaattggccaaaactggcaaagagtatggtttgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttccttaagagagggttcttgccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcacgcaatacccaagaccacgtgcgctccctgtgtctgttggcatggcacaatggtaaggatgaatatgagaaatttgtgagtacaattagatcagttccagttggaaaagcgttggccattcctagctttgagaatttgaggagaaattggctcgaattatttt--aa-tattacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgtcaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-a-aatagcaaaaaa--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ461781.1_Human_enterovirus_71_isolate_NUH0083/SIN/08_complete_genome
-------------------------------------------------------------ccac-g-tggtgctagcactctggttctacggaacccttgtgcgcct-g-ttttacg---c--cccc---a----ccc-c-----aattt-gcaacttagaagc------------aattcacaacact-gatcaa-tagtaggcgtggcgcaccagctacgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtaacgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaatcact-------gaattgttaccatatagctattggattggccgtccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctgcaacc-actctcaactatatattaacccttaatacaatcaaa-----catgggctcacaggtgtccactcaacgatccggctcccatgaaaactccatttcagctacgg-aaggctccaccattaattacaccaccattaactattacaaagattcctatgctgcgacagcgggcaaacagagcctcaaacaagaccccgacaagtttgctaaccctgtcaaggacattttcactgaaatggctgcgcctctaaaatctccatctgctgaagcttgtggttacagcgatcgcgtggcacaactcaccattggaaactccaccattactacacaggaagcggcaaacatcatagtcggctatggagaatggccctcgtactgctccgatgatgacgctacagcggtggataagccaacgcgcccagatgtttccgtgaataggttttatacattggacactaaactgtgggaaaagt------------------catccaagggatggtattggaagtttcctgatgtattgactgagaccggagtctttggccaaaacgcacagtttcactatttatataggtcagggttttgcatccatgtgcaatgcaacgctagcaagttccatcaaggagcgctgttagtcgccatacttccagagtatgtcatagggacagtggcaggtggtacaggaacag------aggacagccaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgatgctgggatccctatatcacaattgacgatatgcccccatcaatggattaacctgcggaccaataactgtgccacaataatagtgccatatatgaatacactgccttttgactccgccctgaaccattgcaattttgggttgttagtagtgcccattagcccattggattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgctggtcttaggcaagcagtcactcaaggctttcccactgagccaaaaccagggacgaaccaattcttgaccactgatgatggcgtctcagcacccatactgccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctactagtttg------atggaaaggctacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgctgtgtttagggctgatcctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcagtggtcagggtcattggaggttactttcatgttcaccgggtcctttatggccacgggtaagatgctcatagcttatacacctcctggcggccccttacccaaggatcgggctacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgtcactctcgtgataccatggatcagtaacacccactacagggcgcatgcccgggatggagtgttcgactactataccacaggactggtcagtatctggtatcaaacaaattacgtagtcccaattggggcacccaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaaactgtgcaaagacactagtcacatattacagacagcctctattcagggagacagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggcgctcacccgggccctgccagca--------cccacaggtcaaaacacacaggtgagcagccatcgattagacaccggtgaagttccagcactccaagctgctgagatcggggcatcatcaaatactagtgatgagagtatgattgagacacgatgtgtccttaactcacacagtacagcagagactaccttggacagtttcttcagcagagcaggtttggtaggagagatagatctccccctagagggtaccac-caatccaaatggttatgccaattgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgatgcggaattcactttcgttgcgtgcactcctactggtgaggtcgttccacaattactccagtatatgtttgttccccctggtgctcctaaaccagattctagagaatcacttgcttggcagacagccacaaacccttcagtttttgttaagttaactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctatcagtggttttacgacgggtaccccacgtttggagaacacaaacaggagaaagatcttgaatatggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatacatgagaatgaagcatgtcagggcatggatacctcgcccgatgcgcaaccaaaattatttgttcaaagccaatccaaattatgccggtaa----ctccattaagccgaccggtactagtcgtaccgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcagtctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctacccataatgactgggcaaacctcgtttgggaagacagctcccgcgacctgttagtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttttctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcacacctgatgctcgcagcgggccactctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgttgttggtatagtgtccacgggtggcaatggactcgttggttttgctgacgtgagggatctcttatggttagatgaagaagccatggagcaaggtgtctctgactacattaag-gggcttggtgacgcgtttgggacaggcttcacagatgctgtatccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaattctaaagaacctcattaagttgatttcagcgttagtaattgtgatcaggagcgattatgatatggtcaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcatccccattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagcgccgccaagggtttagagtggatatccaacaaaattagcaaattcattgactggcttagagagaagattgttccagcagctagagagaaagcagaattcttaaccaacttgaagcaattacca-ctgctagagaaccagatcacaaatttagaacagtctgctgcctcacaagaggaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaagttccaaccattatacgccacagaagctaagcgggtctatgttctaaagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggcatcattgctcgggccatagcagataagtaccactctagtgtgtactcactaccaccagaccctgatcattttgacgggtacaaacagcaagtggttacagtcatggatgatctgtgtcagaatcccgacggcaaggacatgtcactattttgccagatggtgtccactgtggattttatccccccaatggcttctcttgaagaaaagggagtttcttttacatctaaattcgttatcgcatccaccaactccagcaacattatagtgcctacagtgtctgactccgacgccatccgacgcaggttttatatggattgtgacattgaggtgacggactcatacaaaacagacttgggtagattagatgctggacgggctgctaagttatgctctgaaaacaacaccgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcaggtctgctattggcaacacaattgaagcactattccaaggcccgcccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagcgatctcctcgccagtgtagacagcgaggaagtgcgccaatactgt-agggaacaaggttggatcatccctgaaactcccattaatgttgaacgacatctcaacagagcagtactagtcatgcaatccatcgctactgtggtggcagttgtctcactagtgtatgtcatttacaagctctttgcggggtttcaaggtgcgtattctggagctcccaagcaagtgctcaggaaacccgtcctccgcacggcaacagtgcagggtccaagtcttgactttgctctatctctgctgagaagaaacatcaggcaagtccaaacagaccaggggcattttaccatgttaggtgtcagggatcacttagctgtcctcccccggcacgcacagcccgggaagactatttgggtggagcacaaacttgtgaacgtcctcgacgcagtcgagctggtggatgaacagggtgtcaatttggaactcacattggtgacactagacactaatgaaaaatttagagatatcaccaagttcattccagagaccatcagtggcgcaagtgatgcaactttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggagacgtcgtacagtatgggttcttgaacctcagtggaaagccaacgcacagaaccatgatgtacaatttccctacaaaagcaggacaatgtggaggtgtagtcacatcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttctgtgctggtttaaagaggagttacttcgcaagtgtgcagggtgagatccaatgggtgaagtctaacaaagaaaccggtagactgaacatcaatggaccaactcgcactaagttggagcctagtgtgtttcatgatgtgtttaaaggcagtaaggaaccagcagtcttaacaagtaaggaccctagattggaggtcgactttgagcaggctctgttttccaagtatgtgggcaatgttttacatgagcccgatgaatacgtgactcaagctgccctccactatgcgaaccagctcaaacaattggacataaacactagcaagatgagcatggaggaggcgtgctatggcactgagaacctggaagcaatagacctctgtactagtgccggatacccatacagcgcccttggcatcaagaaaagagatattctcgaccccgtaaccagggatgtgtctaagatgaaattttatatggataaatatgggctagacctgccatactccacctacgtgaaggatgagcttaggcctctggataaaatcaagaagggaaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgactttcgggcacctttacgaggtatttcatgccaaccctggcactgtgaccggttcggcagtgggttgcaacccagacgtgttttggagcaagctgccgatcctactgcctgggtcactctttgcctttgactattcaggatatgatgctagcctcagcccggtatggttcagggccctagaagttgtgttacgggaaattgggtatacagaggaggccgtgtctctaatagaaggaatcaaccacacccaccatgtgtaccggaacaaaacatactgtgtacttggtgggatgccctcagggtgttctggtacctccatctttaattcaatgatcaacaacatcatcattaggaccctcttaattaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgctggctagttatccttttcctatcgattgccttgaattggccaagactggcaaagagtatggtttgactatgacacctgcagacaaatcaccctgtttcaatgaagtgacatgggaaaatgctaccttccttaagagagggttcttgccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcacgcaatacccaagaccacgtgcgctccctgtgtctgttggcatggcacaatggtaaggatgaatatgagaaatttgtgagtacaattagatcagttccagttggaaaagcgttggccattcctagctttgagaatttgagaagaaattggctcgaattatttt--aa-tattacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM508794.1_Enterovirus_A71_strain_TLLcho_complete_genome
------------------tttcaa--acg-cct-gtgggttg-c-acccactcaca-gggcccac-g-tggcgctagcactttggttttacggaacctttgtgcgcct-gtttttacg---c--ccct---t----ccc-c-----aattt-gcaacttagaagc------------aatgcacaacact-gatcaa-caggcggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgactatcaatagactgc-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgaaaaacc-tagtaacaccattgaagctgcagagtgtttcgctcggca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaatgcggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgcc-tcaaccca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta---ctttttt-ggctttgtaccac-----taacctt--------------aaaatctataatc-accctcgactttatattaaccctcaacacagtcaag-----catgggctcacaggtgtccactcagcgatccggctcccacgagaactccaattcagctacag-gaggctccaccattaattatactaccatcaactattacaaagactcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcgccactgaagtctccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccattggaaactccaccattactacacaggaggcggcaaacatcatagttggttacggtgagtggccctcatactgctctgatgacgacgctacagcggtggacaaaccaacgcgcccagatgtttcagtgaataggttttatacactggacactaaactgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtgttgactgagaccggagtctttggccagaatgcacagtttcactatttgtataggtcagggttttgcattcatgtgcaatgtaacgctagcaagttccatcaaggagcgctgttagtcgccatacttccagagtatgttatagggacaatagcaggcggtacaggaacag------aggacacccaccctccttacatacaaacacaacctggcgccgacggtttcccgctgcagcacccgtacgtgctcgatgctgggattcctatatcacaattgacagtgtgtccccatcaatggattaacctgcggaccaataactgtgccacaataatagtgccatatatgaacacactgcctttcgactctgccctgaaccattgcaattttgggctgttggtagtacccattagcccattagattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgcaggtctcagacaggcagtcactcaaggctttcccactgagccaaaaccaggaacgaatcaattcttgaccaccgatgacggcgtctcagcacccattctaccaaatttccatcccactccatgtattcacatacccggtgaagtcagaaacctgcttgagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatcctaccagtctg------atggaaaggctacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgccgtgtttagggccgaccctggaagagacggtccatggcaatcaacaatgctgggccagttgtgtggatattacacccagtggtcagggtcactggaggtcacttttatgtttaccgggtctttcatggccacaggtaaaatgctcatagcttatacacctcctggcggccccttacccaaagatcgggccacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtaataccatggattagtaatacccactacagggcgcatgcccgggatggagtgtttgactactataccgcaggactggtcagtatctggtatcaaacaaactacgtagttccaattggggcacccaacacagcttatataatagcactagcggcagcccagaagaatttcaccatgaaactgtgcaaagacacctgtcacatgttacagacagcctccattcagggagatagg--------gtggcagatgcgatcg---agagctctat--------------------------aggagatagtgtgagtagggcacttacccaggccctgccagca--------cccacaggtaaaaacacacaggtgagcagtcatcgactagacactggcgaagttccagcgctccaagctgctgaaattggggcatcgtcaaatactagtgatgagagtatgattgagacacgatgcgttcttaactcacatagtacagcagagaccaccttggacagtttcttcagtagggcaggtttggtaggagaggtagaactccctcttgagggtaccac-caatccaggtggttatgccaactgggacatagacataactggttacgcacaaatgcgcaggaaagtggagctgttcacctacatgcgctttgatgcggaattcacttttgttgcgtgcactcctactggtgcggttgttccacaattactccagtatatgtttgttccccccggtgctcccaaaccagagtctagagattcatttgcttggcagacagccacaaacccctcagtctttgtcaagttgactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggagaaagacctcgagtatggagcgtgtcctaataatatgatgggcactttctcggtgcgaaccgtggggtcattaaagtccaagcaccccttggttgtcagaatatatatgagaatgaagcatgtcagggcgtggatacctcgcccgatgcgcaaccaaaactatttgttcaaagccaacccaaactatgccggtga----ctccattaagccgaccggcactagtcgtacttccat---taccac---------------------------------------ccttgga------------------------------------------aagttcggccagcagtctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataatgactgggcgaacctcgtctgggaagacagctcccgcgacctattagtgtcgtctaccaccgctcagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaattccaagagaaagcactatccagtcagcttttctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagtgggccactctgagcccggcgactgcggaggcatcttgaggtgtcaacatggtgtagttggtatagtgtccacgggtggcaacgagctcgttggatttgctgatgtgagggacctcttgtggttagatgaagaggccatggagcaaggtgtgtccgactacattaag-gggctcggtgatgcgtttggaacaggcttcactgacgctgtatccagggaagttgaagcccttaggaaccaccttataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtaattgtgatcaggagcgattatgatatggtcaccctcacagcaactttagccctgattggttgtcatggaagtccttgggcttggattaaagccaagacagcatccattttaggtatccccatcgcccagaagcagagtgcttcttggctaaagaaatttaatgatatggcgagtgctgccaagggtttagaatggatatctaataaaattagcaagttcattgactggctcagggagaaaattgttccagcagctaaggagaaagtagaatttttaaccaatttgaagcaattgcca-ctattagagaaccagatcacaaatttagagcagtccgctgcctcacaagaggaccttgaagctatgtttgggaatgtgtcatatctcgccca---------tttctgtcgcaagttccaaccattatacgccgcggaagctaagcgagtctatgttctagagaagagaatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattagaggctcaccaggcactggaaagtcccttgcgaccggtatcattgctcgggccatagcagacaagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcctgacggcaaagacatgtcattattttgccagatggtgtctaccgtggattttatcccaccaatggcttctctcgaagaaaagggagtttctttcacatctaaatttgttatcgcatccaccaacgctagcaacattatagtgcctacagtgtcagactctgacgccattcgtcgcaggttttacatggattgcgacattgaggtgacagactcatacaaaacagatttgggtagactagacgctggacgggctgctaagctatgctctgagaacaacaccgcaaacttcaaacgatgcagcccactagtgtgtgggaaagctattcaacttagagacaggaagtataaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatataatagcagatccgctattggtaatacaattgaagcactattccaaggtccacccaagttcaggccaattagaatc---agtcttgaggagaagccagtcccagacgctattggcgatctcctcgctagtgtagatagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccaccaatgttgaacgacaccttaatagagcagtgctagtcatgcaatccatcgctactgtggtggcagtcgtctcactggtgtacgttatttacaagctctttgcggggtttcaaggtgcgtactctggagctcccaagcaaatgcccaagaaacctgtcctccgtacggcaacagtgcagggtccgagtcttgactttgctctatccttactgagaaggaacatcaggcaagtccaaacagatcaagggcattttaccatgttaggtgtcagagatcgcttagccgttcttccacggcactcacagcccgggaagactatttgggtggagcacaaacttgtgaacgtccttgacgcagttgagctggtggatgagcagggcgttaatttggaactcacattggtgacactagatactaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaactttagtgatcaacacagaacatatgccatcaatgtttgtcccagggggggacgtcgtgcagtacgggttcttgaaccttagtggaaagccaactcataggaccatgatgtacaatttccctacaaaagcaggacagtgtggaggtgtggtcacatcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtgtgcagggtgagatccaatgggtgaagcctaacaaggaaactggtagactgaacatcaatggtccaactcgcactaagctggagcctagtgtgtttcatgatgtgtttgaaggtaataaggaaccagcagttttatcaagtaaagaccctagattggaggtcgactttgaacaagccctgttttccaagtatgtgggcaatgttttacacgagcccgatgaatacgtgattcaagctgccctccactacgcgaatcaacttaaacaattggacatagacactagcaagatgagcatggaggaagcgtgctatggcactgaaaacctggaagcaatagacctctgcactagtgccgggtacccatatagcgcccttggtatcaagaaaagagacattcttgaccccacaaccagggatgtgtccaagatgaaattctatatggataaatacgggctagacctgccatactgtacctatgtgaaggatgagcttaggtccctggataaaatcaagaaaggaaaatcacgcttgatagaggctagtagcttgaatgactctgtctaccttagaatgacttttgggcacctttacgaggtgtttcatgccaaccctggcactgtgactggctcagcagtgggttgcaacccggacgtgttttggagcaaactaccgattctgctgcctgggtcactctttgcctttgactactcaggatacgatgctagtctcagcccggtatggttcagggctctagaagttgtgttacgggagattgggtattcagaggaggccgtgtccctaatagaagggatcaaccacacccaccatgtgtaccggaacaaaacatactgtgtacttggtggaatgccctcgggatgttctggtacttccatctttaatacaatgatcaacaacatcatcattagaacccttttgatcaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgctggctagttacccctttcccattgattgccttgagttggctaagactggcaaagagtatggtttgaccatgacacctgcagacaaatcaccctgtttcaatgaagtaacatgggaaaatgctaccttcctgaagagaggattcttgccagaccaccaatttccattcttaattcaccctacgatgcccatgagtgagatccgtgagtccattcgatggactaaagacgcgcgcaacacccaagatcacgtgcgctccctgtgtctgttggcatggcacaatggtaaggatgaatatgagaagtttgtgagtgcaattagatcagttccagttggaaaagcgttggccattcctaatttcgagaacctgagaagaaattggctcgaattgtttt--aa-tattacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----cgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaa-------------------------------------------------------------------------------------------------------
>KF514878.1_Enterovirus_A71_strain_BS_polyprotein_gene_complete_cds
------------------ttcaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-g-tggcgctagcactctggttctacggaacctttgtgcgcct-g-ttttacg---c--ccct---t----ccc-c-----aattt-gcaacttagaagc------------aatacacaacact-gatcaa-cagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-tagtaacaccattgaagctgcagagtgtttcgctcggca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggtgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgcggacatggtgcg-aagagtctattgagctagttagtggtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctataacc-accctcgactttatattaaccctcaacacagtcaag-----catgggctcacaggtgtccactcagcgatccggctcccacgagaactccaattcagctacag-aaggctccaccattaattacactaccatcaactattacaaagactcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcgccactgaagtctccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccattggaaactccaccattactacacaggaggcggcaaacatcatagttggttacggtgagtggccctcatactgctctgatgacgacgctacagcggtggacaaaccaacgcgcccagatgtttcagtgaataggttttatacactggacactaaactgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtgttgactgagaccggagtctttggccagaacgcacagtttcactatttgtatagatcagggttttgcattcatgtgcaatgtaacgctagcaagttccatcaaggagcgctgttagtcgccatacttccagagtatgttatagggacagtggcaggcggtacaggaacag------aggacagccaccctccttacaaacaaacacaacctggcgccgacggttttgagctgcagcacccgtacgtgctcgatgctgggattcctatatcacaattgacagtgtgcccccatcaatggattaacctgcggaccaataactgtgccacaataatagtgccatatatgaacacactgcctttcgactctgccctgaaccattgcaattttgggctgttggtagtgcccattagcccattagattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgcaggtctcagacaggcagtcactcaaggctttcccactgagccaaaaccaggaacgaatcaattcttgaccaccgatgacggcgtctcagcacccattctaccaaatttccaccccactccatgtattcacatacccggtgaagtcagaaacctgcttgagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctaccagtctg------atggaaaggctacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgccgtgtttagggccgaccctggaagagacggtccatggcaatcaacaatgctgggccagttgtgtggatattacacccagtggtcagggtcactggaggtcacttttatgtttaccgggtctttcatggccacaggtaaaatgctcatagcttatacacctcctggcggccccttacccaaagatcgggccacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtaataccatggattagtaatacccactacagggcgcatgcccgggatggagtgttcgactactataccacaggactggtcagtatctggtatcaaacaaactacgtagttccaattggggcacccaacacagcttacataatagcactagcggcagcccagaagaattttaccatgaaactgtgcaaagacaccagtcacatattacagacagcctccattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagatagtgtgagtagggcacttacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactagacactggcgaagttccagcgctccaagctgctgaaattggggcatcgtcaaatactagtgatgagagtatgattgagacacgatgcgttcttaactcacatagtacagcagagaccaccttggacagtttcttcagtagggcaggtttggtaggagagatagatctccctcttaagggtaccac-caatccaaatggttatgccaactgggacatagacataactggttacgcacaaatgcgcaggaaagtggagctgttcacctacatgcgctttgatgcggaattcacttttgttgcgtgcactcctactggtgaggttgttccacaattactccagtatatgtttgttccccctggtgctcccaaaccagagtctagagaatcacttgcttggcagacagccacaaacccctcagtctttgtcaagttgactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggagaaagacctcgagtatggagcgtgtcctaataatatgatgggcactttctcggtgcgaaccgtggggtcatcaaagtccaagtaccccttggttgtcagaatatatatgagaatgaagcatgtcagggcgtggatacctcgcccgatgcgcaaccaaaactatttgttcaaagccaacccaaactatgccggtaa----ctccattaaaccgaccggcactagtcgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcagtctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataatgactgggcgaacctcgtctgggaagacagctcccgcgacctattagtgtcgtctaccaccgctcagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaattccaagagaaagcactatccagtcagcttttctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcgcacctaatgcttgcagtgggccactctgagcccggcgactgcggaggcatcttaaggtgtcaacatggtgtagttggtatagtgtccacgggtggcaacgggctcgttggatttgctgatgtgagggatctcttgtggttagatgaagaggccatggagcaaggtgtgtccgactacattaag-gggctcggtgatgcgtttggaacaggcttcactgacgctgtatccagggaagttgaagcccttaggaaccacctcataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtaattgtgatcaggagcgattatgatatggtcaccctcacagcaactttagccctgattggttgtcatggaagtccttgggcttggattaaagccaagacagcatccattttaggtatccccatcgcccagaagcagagtgcttcttggctaaagaaatttaatgatatggcgagtgctgccaagggtttagaatggatatccaataaaattagcaagttcattgactggctcagggagaagattgttccagcagctaaggagaaagcagaatttttaaccaatttgaagcaattgcca-ctattagagaaccagatcacaaatttagagcagtccgctgcctcacaagaggaccttgaagctatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaagttccaaccattatacgccacggaagctaagcgagtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattagaggctcaccaggcactggaaagtcccttgcgaccggtatcattgctcgggccatagcagacaagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcagaatcctgacggcaaagacatgtcattattttgccagatggtgtccaccgtggattttatcccaccaatggcttctctcgaagaaaagggagtttctttcacatctaaatttgttatcgcatccaccaacgctagcaacattatagtgcctacagtgtcagactctgacgccattcgtcgcaggttttacatggattgcgacattgaggtgacagactcatacaaaacagatttgggtagactagacgctggacgggctgctaagctatgctctgagaacaacaccgcaaacttcaaacgatgcagcccactagtgtgtgggaaagctattcaacttagagacaggaagtctaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatataatagcagatccgctattggtaacacaattgaagcactattccaaggcccacccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattggcgatctcctcgctagtgtagatagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccaccaatgttgaacgacaccttaatagagcagtgctagtcatgcaatccatcgctactgtggtggcagtcgtctcactggtgtacgttatttacaagctctttgcggggtttcaaggtgcgtactctggagctcccaagcaaatgctcaagaaacctgtcctccgtacggcaacagtgcagggtccgagtcttgactttgctctatccttactgagaaggaacatcaggcaagtccaaacagatcaagggcattttaccatgttaggtgtcagagatcgcttagccgttctcccacggcactcacagcccgggaagactatttgggtggagcacaaacttgtgaacatccttgacgcaattgagctggtggatgagcagggcgttaatttggaactcacattggtgacactagatactaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaactttagtgatcaacacagaacatatgccatcaatgtttgtcccagtgggggacgtcgtgcagtacgggttcttgaaccttagtggaaagccaactcataggaccatgatgtacaatttccctacaaaagcaggacagtgtggaggtgtggtcacatcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtgtgcagggtgagatccaatgggtgaagcctaacaaggaaactggtagactgaacatcaatggtccaactcgcactaagctggagcctagtgtatttcatgatgtgtttgaaggtaataaggaaccagcagttttaacaagtaaagaccctagattggaggtcgactttgaacaagccctgttttccaagtatgtgggcaatgttttacacgagcccgatgaatacgtgattcaagctgccctccactacgcgaatcaacttaaacaattggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgaaaacctggaagcaatagacctctgcactagtgccgggtacccatacagcgcccttggcatcaagaaaagagacattcttgaccccacaaccagggatgtgtctaagatgaaattctatatggataaatacgggctagacctgccatactctacctatgtgaaggatgagcttaggtccctggataaaatcaagaaaggaaaatcacgcttgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtgtttcatgccaaccctggcactgtgactggctcagcagtgggttgcaacccggacgtgttttggagcaaactaccgattctgctgcctgggtcactctttgcctttgactactcaggatatgatgctagtctcagcccggtatggttcagggctctagaagttgtgttacgggagattgggtattcagaggaggccgtgtccctaatagaagggatcaaccacacccaccatgtgtaccggaacaaaacatactgtgtacttggtggaatgccctcgggatgttctggtacttccatctttaattcaatgatcaacaacatcatcattagaacccttttgatcaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgctggctagttacccctttcccattgattgccttgagttggctaaaactggcaaagagtatggtttgaccatgacacctgcagacaaatcaccctgtttcaatgaagtaacatgggaaaatgctaccttcctgaagagaggattcttgccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccgtgagtccattcgatggactaaagacgcgcgcaacacccaagatcacgtgcgctccctgtgtctgttggcatggcacaatggtaaggatgaatatgagaagtttgtgagtgtaattagatcagttccagttggaaaagcgttggccattcctaatttcgagaatctgagaagaaattggctcgaattgtttt--aa-tattacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----cgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa----------------------------------------------------------------------------------------------------
>AJ586873.1_Human_enterovirus_71_gene_for_polyprotein_isolate_EV71/9/97/SHA89
-------------------taaaa--cag-ctg-gggggtgg-t-acccactcaca-gggcccac-g-tggcgctagcactctggttctacggaacctttgtgcgcct-g-ttttacg---c--ccct---t----ccc-c-----aattt-gcaacttagaagc------------aatacacaacact-gatcaa-cagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaataaactgt-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-tagtaacaccattgaagctgcagagtgtttcgctcggca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggtgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtggtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctataacc-accctcgactttatattaaccctcaatacagtcaaa-----catgggctcacaggtgtccactcagcgatccggctcccacgagaactccaattcagctacag-aaggctccaccattaattacactaccatcaactattacaaagactcctatgctgcgacagcgggcaaacagagcctcaaacaagatcctgataagtttgccaaccctgtcaaggacattttcactgaaatggctgcgccactgaagtctccatctgctgaagcttgtggttacagtgatcgcgtggcacaactcaccattggaaactccaccattactacacaggaggcggcaaacatcatagtcggttacggtgagtggccctcatactgctctgatgacgacgctacagcggtggacaaaccaacgcgcccagatgtttcagtgaataggttttatacactggacactaaactgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtgttgactgagaccggagtctttggccagaacgcgcagtttcactatttatatagatcagggttttgcattcatgtgcaatgtaacgctagcaagttccatcaaggagcgctgttagtcgccatacttccagagtatgttatagggacagtggcaggcggcacaggaacag------aggacagccaccctccttacaaacaaacacaacctggcgccgacggttttgagctgcagcacccgtacgtgctcgatgctgggattcctatatcacaattgacagtgtgcccccatcaatggattaacctgcggaccaataactgtgccacaataatagtgccatatatgaatacactgcctttcgactctgccctgaaccattgcaattttgggctgttggtagtgcccattagcccattagattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgcaggtctcagacaggcagtcactcaaggctttcctactgagccaaaaccaggaacgaatcaattcttgaccaccgatgacggcgtctcagcacccattctaccaaatttccaccccactccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctactagtctg------atggaaaggctacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgccgtgtttagggccgaccttgaaagagacggtccatggcaatcaacaatgctgggccagttgtgtggatattacacccagtggtcagggtcactggaggtcacttttatgtttaccgggtctttcatggccacaggtaaaatgctcatagcttatacacctcctggcggccccttacccaaagatcgggccacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtaataccatggatcagtaacacccactacagggcgcatgcccgggatggagtgttcgactactataccacaggactggtcagtatctggtatcagacaaactacgtagttccaattggggcgcccaacacagcttacataatagcactagcggcagcccagaagaattttaccatgaaactgtgcaaagacaccagtcacatattacagacagcctctattcagggggatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagatagtgtgagtagggcacttacccaggccctgccagca--------cccacaggacaaaacacacaggtgagcagtcatcgactagacactggcgaagttccagcgctccaagctgctgaaattggggcatcgtcaaatactagtgatgagagtatgattgagacacgatgcgttcttaactcacacagtacagcagagaccaccttggacagtttcttcagtagggcaggcttggtaggagagatagatctccctcttgagggcaccac-caatccaaatggttatgccaactgggatatagacataactggttacgcacaaatgcgcaggaaagtggagctgttcacctacatgcgctttgatgcggaattcacttttgttgcgtgcactcctactggtgaggttgttccacaattactccagtatatgtttgttccccctggtgctcccaaaccagagtctagagaatcacttgcttggcagacagccacaaacccctcagtctttgtcaagttgactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcttaccagtggttttacgacgggtatcccacgtttggagaacacaaacaggagaaagaccttgagtatggagcgtgtcctaataatatgatgggcactttctcggtgcgaaccgtggggtcatcaaagtctaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaactatgccggtaa----ttccattaaaccgaccggcactagtcgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcagtctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataatgactgggcgaacctcgtctgggaagacagttcccgcgacctattagtgtcgtctaccaccgctcagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttttctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcggaggtatcttaaggtgtcaacatggtgtagttggtatagtgtccacgggtggcaacgggctcgttggatttgctgatgtgagggatctcttgtggttagatgaagaggccatggagcaaggtgtgtccgactacattaag-gggctcggtgacgcgtttggaacaggcttcactgatgccgtatccagggaagttgaagcccttaggaaccacctcataggatctgatggagcagttgagaaaatcctaaagaaccttattaagctgatttcagcgctagtaattgtgatcaggagcgattatgatatggtcaccctcacagcaactttagccctgattggttgtcatggaagtccttgggcttggattaaagccaagacagcatccattttaggtatccccatcgcccaaaagcagagtgcttcttggctaaagaaatttaatgatatggcgagtgccgccaagggtttagaatggatatccaccaaaattagcaagttcattgactggctcagggagaagattgttccagcagctaaggagaaagcagaatttttaaccaatttgaagcaattgcca-ctgttagagaaccagatcacaaatttagagcagtccgctgcctcacaagaggaccttgaagctatgtttgggaacgtgtcatacctcgccca---------tttctgtcgcaagttccaaccattatacgccacggaagctaagcgagtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattagaggctcaccaggcactggaaagtcccttgcgaccggtatcattgctcgggccatagcagacaagtaccactctagtgtgtactcacttccaccagaccctgatcattttgacgggtacaaacagcaagtggttacagttatggatgatctgtgtcaaaatcctgacggcaaagacatgtcattattttgccagatggtgtccaccgtggattttatcccaccaatggcttctctcgaagaaaagggagtttctttcacatctaaatttgttatcgcatccaccaacgctagcaacattatagtgcctacagtgtcagactctgacgccattcgtcgcaggttttatatggattgcgacattgaggtgacagactcatacaaaacagatttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacaccgcaaacttcaaacgatgcagcccactagtgtgtgggaaagctattcaacttagagacaggaagtctaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatccaatagcagatccgctattggtaacacaattgaagcactattccaaggcccacccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattggcgatctcctcgctagtgtagatagcgaggaagtacgccaatactgt-agggagcaaggctggatcattcctgaaactcccaccaatgttgagcgacaccttaatagagcagtgctagtcatgcaatccatcgctactgtggtggcagtcgtctcactggtgtacgtcatttacaagctctttgcggggtttcaaggtgcgtattctggagctcccaagcaaatactcaagaaacctgtcctccgtacggcaacagtgcagggtccgagtcttgactttgctctatccttactgagaaggaacatcaggcaagtccaaacagatcaagggcattttaccatgttaggtgtcagagatcgcttagccgttctcccacggcactcacagcccgggaagactatttgggtggagcataaacttgtgaacatccttgacgcaatcgagctggtggatgagcagggcgttaatttggaactcacattggtgacactagatactaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaactttagtgatcaacacagaacatatgccatcaatgtttgtcccagtgggagacgtcgttcagtacgggttcttgaaccttagtggaaagccaactcataggaccatgatgtacaatttccctacaaaagcaggacagtgtggaggtgtggtcacatcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttctgtgctggtttaaagaggagttacttcgcaagtgtgcagggtgagatccaatgggtgaagcctaacaaggaaactggtagactgaacatcaatggaccaactcgcactaagctggagcctagtgtatttcatgatgtgtttgaaggcaataaagaaccagcagttttaacaagtaaagatcctagattggaggtcgactttgaacaagccctgttttccaagtatgtgggcaatgttttacacgagcctgatgaatacgtgacccaagctgccctccactacgcgaatcaacttaaacaattggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgaaaacctggaagcaatagacctctgcactagtgccgggtacccatacagcgcccttggcatcaagaaaagagacattcttgaccccacaaccagggatgtgtctaagatgaaattctatatggataagtatgggttagatctgccatactctacctatgtgaaggatgagcttaggtccctggataaaatcaagaaaggaaagtcacgcttgatagaggctagcagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtgtttcatgctaaccctggcactgtgactggctcagcagtgggttgcaacccggacgtgttctggagcaaactaccgattctgctgcctgggtcactctttgcctttgactactcaggatatgatgctagtctcagcccggtatggttcagggctctagaagttgtgttacgggagattgggtattcagaggaggccgtgtccctaatagaagggatcaaccacacccaccatgtgtaccggaacaaaacatactgtgtacttggtggaatgccctcaggatgttctggtacttccatctttaattcaatgatcaacaacatcatcattagaacccttttgatcaaaacctttaagggaatagacctggatgagttaaatatggtggcctatggggacgatgtactggctagttacccctttcccattgattgccttgagttggctaagactggcaaagagtatggtttgaccatgacacctgcagacaaatcaccctgtttcaatgaagtaacatgggaaaatgctaccttcctgaagagaggattcttgccagaccatcagtttccattcttaattcaccctacaatgcccatgagagagatccatgagtccattcgatggactaaagacgcgcgcaacacccaagatcacgtgcgctccctgtgtctgttggcatggcacaatggtaaggatgaatatgagaagtttgtgagtgcaattagatcagttccagtcggaaaagcgttggccattcctaacttcgagaatctgagaagaaattggctcgaattgtttt--aa-tattacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----cgttaat-g-acta--------gtgggggt-aatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT354871.1_Enterovirus_A71_isolate_N7008-TW99\VP1-E98K_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-g-tggcgctagcactctggttctacggaacctttgtgcgcct-g-ttttacg---c--ccct---t---cccc-c-----aattt-gcaacttagaagc------------aatacacaacact-ggtcaa-cagtaggcatggcgcaccagccatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcggca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggtgaccgtggcagtggctgcgctggcggcctgcctat--------ggggtaa-cccataggacgctctaatgcggacatggtgcg-aagagtctattgagctagttagtggtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtgccac-----taacctt--------------aaaatctataacc-accctcgactttatactaaccctcaatacagtcaaa-----catgggctcacaggtgtccactcagcgatccggctcccacgagaactccaattcagctacag-aaggctccaccattaattacactaccatcaactattacaaagactcctatgctgcgacagcgggtaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaagacattttcactgaaatggctgcgccactgaagtctccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccattgggaactccaccattactacacaggaggcggcaaacatcatagtcggttacggtgagtggccctcatactgctctgatgacgacgccacagcggtggacaaaccaacgcgcccagatgtttcggtgaataggttttatacactggacactaaactgtgggaaaagt------------------catctaagggttggtattggaagtttcctgatgtgttgactgagaccggagtctttggccagaacgcacagtttcactatttgtatagatcagggttttgcattcatgtgcaatgtaacgctagcaagttccatcaaggagcgctgttagtcgccatacttccagagtatgttatagggacagtggcaggcggcacaggaacag------aggacagccaccctccttacaaacaaacacaacctggcgctgacggttttgagctgcagcacccgtacgtgctcgatgctgggattcctatatcacaattgacagtgtgcccccatcaatggattaacctgcggaccaataattgtgccacaataatagtgccatatatgaatacactgcctttcgactctgccctgaaccattgcaattttgggctgttggtagtgcccattagcccattagatttcgaccaaggggcaacaccggttatccctattacaatcactctagctccaatgtgctctgagtttgcaggtctcagacaagcagtcactcaaggctttcccactgagccgaaaccaggaacgaatcaattcttgaccaccgatgacggcgtctcagcacccattctaccaaatttccaccccactccatgtattcacatacccggtgaagtcagaaacctgcttgaattgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctactagtttg------atggaaaggctacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgccgtgtttagggccgaccctggaagagacggtccatggcaatcaacaatgctgggccaactctgtggatattacacccagtggtcagggtcactggaggtcacttttatgtttaccgggtctttcatggccacaggtaaaatgctcatagcttatacacctcctggcggccccttacccaaagatcgggccacagcaatgctgggcacacatgttatctgggattttgggctgcaatcatctgttacccttgtaataccatggatcagtaacacccactacagggcgcatgcccgggatggagtgttcgactactataccacaggactgatcagtatctggtatcaaacaaactacgtagttccaattggggcacccaacacagcttacataatagcactagcggcagcccagaagaattttaccatgaaactgtgcaaagacaccagtcacatattacagacagcctctattcagggagatagg--------gtggcagacgtgatcg---agagctctat--------------------------aggaaatagtgtgagtagggcacttacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactagacactggcgaagttccagcgctccaagctgctgaaattggggcatcatcaaatactagtgatgagagtatgattgagacacgatgcgttcttaactcacacagtacagcagagaccaccttggacagttttttcagtagggctggtttggtaggagagatagatctccctcttaagggtaccac-caatccaaatggttatgccaactgggatatagacataactggttacgcacaaatgcgcaggaaagtggagctgttcacctacatgcgctttgatgcggaattcacttttgttgcgtgtactcctactggtcaggttgttccacagttactccagtatatgtttgttccccctggtgctcccaaaccagagtctagagagtcacttgcttggcagacagccacaaacccctcagtctttgtcaagttgactgaccccccggcacaagtctcagttccgttcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggagaaagaccttgagtatggagcgtgtcctaataatatgatgggcactttctcggtgcgaaccgtggggtcatcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaactatgccggcaa----ctccattaaaccgaccggcactagtcgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcagtccggggccatctacgtgggcaactttagagtggttaatcgtcacctcgctactcataatgactgggcgaacctcgtctgggaagacagctcccgcgacctattagtgtcgtctaccaccgctcagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtattattgcaattccaagagaaagcactatccagtcagcttttctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggcgactgcggaggcatcttaaggtgtcaacatggtgtagttggtatagtgtccacgggtggcaacgggctcgttggatttgctgatgtgagggatctcttgtggttagatgaagaggctatggagcaaggtgtgtccgactacattaag-gggctcggtgacgcgtttggaacaggcttcactgaagctgtatccagggaagttgaagcccttaggaaccacctcataggatctgatggagcggttgagaaaatcctaaagaaccttattaagctgatttcagcgttagtaattgtgatcaggagcgattatgatatggtcaccctcacagcaactttagccctgattggttgtcacggaagtccttgggcttggattaaagccaagacagcatccatcttaggtatccccatcgcccagaagcagagtgcttcttggctaaagaaatttaatgatatggcgagtgccgccaagggtttagaatggatatccaacaaaattagtaagttcattgactggctcagggagaagattgttccagcagccaaggagaaagcagaatttttaaccaatttgaagcaattgcca-ctgttagagaaccagatcacgaacttagagcagtccgctgcctcacaagaggaccttgaagctatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaagttccaaccattatacgccacggaagctaagcgagtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattagaggctcaccaggcactggaaagtcccttgcgaccggtatcattgctcgggtcatagcagacaagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtataaacagcaagtggtcacagttatggatgatctgtgtcaaaaccctgacggcaaagacatgtcattattttgccagatggtgtccaccgtggattttatcccaccaatggcttctctcgaagaaaagggagtttccttcacatctaaatttgttatcgcatccaccaacgctagcaacattatagtgcctacagtgtcagactctgacgccattcgtcgcaggttttacatggattgcgacattgaggtgacagactcatacaaaacagatttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacaccgcaaacttcaaacgatgcagcccactagtgtgtgggaaagctattcagcttagagacaggaagtctaaggtcaggtacagcgtggacacagtggtctctgaactcattagagaatacaatagcagatccgctattggtaacacaattgaagcactattccaaggcccacccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagcgatctcctcgctagtgtagatagcgaggaagtgcgccaatactgc-agggagcaaggctggatcatccctgaaacccccaccaatgttgaacgacaccttaatagagcagtgctagtcatgcaatccatcgctactgtggtggcagtcgtctcactggtgtacgtcatttacaagctctttgcggggtttcaaggtgcgtactctggagctcctaagcaaatgctcaagaaacctgtcctccgtacggcaacagtgcagggtccgagtcttgactttgctctatccttactgagaaggaacatcagacaagtccaaacagatcaagggcattttaccatgttaggtgtcagagatcgcttagccgttctcccacggcactcacagcccgggaagactatttgggtggagcacaaacttgtgaacatccttgacgcgttcgagctggtggatgagcagggcgtcaatttggaactcacattggtgacactagatactaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaactttagtgatcaacacagaacatatgccatcaatgtttgtcccagtgggggacgtcgtgcagtacgggttcttgaaccttagtggaaagccaacccataggaccatgatgtacaatttccctacaaaagcaggacagtgtggaggtgtggtcacgtcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcgagtgcgcagggtgagatccaatgggtaaagcctaacaaggaaactggtagactgaacatcaatggtccaactcgcactaagctggagcctagtgtatttcatgatgtgtttgaaggtaataaggaaccagcagttttaacaagtaaagaccctagattggaggtcgactttgaacaagccctgttttccaagtatgtgggcaatgttttacacgagcccgatgaatatgtgactcaagctgccctccactacgcgaatcaacttaaacaattggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgaaaacctggaggcaattgacctctgcactagtgccgggtacccatacagcgcccttggcatcaagaaaagagacattcttgaccccacaaccagggatgtgtctaagatgaaattctatatggataaatacgggctagatctgccatactctacctatgtgaaggatgagcttaggtccctggataaaatcaagaaaggaaagtcacgcttgatagaggctagtagcttgaatgactctgtctacctcagaatggcttttgggcacctttatgaggcgtttcatgctaaccctggcactgtgactggctcagcagtgggttgtaacccggacgtgttttggagcaaactaccgattctgctgcctgggtcgctctttgcctttgactactcaggatatgatgctagtctcagcccggtatggttcagggctttagaagttgtgttacgggagattgggtattcagaggaggccgtgtccctaatagaagggatcaaccacacccaccatgtgtatcggaacaaaacatactgtgtacttggtggaatgccctcaggatgttctggtacttccatctttaattcratgatcaacaacatcatcatcagaacccttttgatcaaaacttttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgctggctagttacccctttcccattgattgccttgagttggctaagactggcaaagagtatggtttgaccatgactcctgcagacaaatcaccctgtttcaatgaagtaacatgggaaaatgctaccttcctgaagagaggattcttgccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgaatccattcgatggactaaagacgcgcgcaacacccaagatcacgtgcgctccctgtgtctgttggcatggcacaatggtaaggatgaatatgagaagtttgtgagtgcaattagatcagttccagttggaaaagcgttggccattcctaacttcgagaatctgagaagaaattggctcgaattgtttt--aa-tattacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----cgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaaaaa----------aaaaaaaaaaaaaaaa-------
>AB550336.1_Human_enterovirus_71_genomic_RNA_complete_genome_strain:_C7/Osaka-org
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-g-tggcgctagcactctgattccacggaacctttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gcaacttagaagc------------aatacacaacact-gatcaa-cagcaggcatggcacaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgt-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-tagtagcaccattgaagctgcagagtgtttcgctcggca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tggtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaattgca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctataacc-accctcgactttatattaaccctcaatacaatcaaa-----catgggctcacaggtgtctactcagcgatccggttcccacgagaactccaattcagctacag-aaggctccaccattaattacactaccatcaactattacaaagactcctatgctgcgacagcgggcaaacaaagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcgccactgaagtctccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccattggaaactccaccattactacacaggaggcggcaaacatcatagtcggttatggtgagtggccctcatactgctctgatgacgatgctacagcggtggacaaaccaacgcgcccagatgtttcagtgaataggttttacacattggacactaaactgtgggaaaaat------------------catccaaggggtggtattggaagtttcctgatgtgttgactgagaccggagtctttggccagaacgcacagtttcactatttatatagatcagggttttgcattcatgtacaatgtaatgctagcaagttccatcaaggagcgctgttagtcgctatacttccagagtatgttatagggacagtagcaggcggcacaggaacag------aggacagccaccctccttacaaacaaacacagcctggcgccgacggttttgagctgcagcacccgtacgtgctcgatgctgggattcctatatcacaattgacagtctgcccccatcaatggattaacctgcggaccaataactgtgccacaataatagtgccatatatgaatacactgcctttcgactctgccctgaaccattgcaattttgggctgttggtagtgcccattagcccattagactttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgcaggtctcagacaggcagtcacacaaggctttcccactgagccaaaaccaggaacgaatcaattcttgaccaccgatgacggcgtctcggcgcccattctaccaaatttccaccccactccatgtattcacatacccggtgaagtcagaaacctgcttgagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctactagtctg------atggaaaggctacgattcccagtgtccgcgcaagcgg------ggaaaggtgaattgtgtgccgtgtttagggccgaccctggaagagacggcccatggcaatcaacaatgctgggccagttgtgtggatattacacccagtggtcagggtcactggaggtcacttttatgtttaccgggtcattcatggccacgggtaaaatgctcatagcttacacacctcctggcggcccattacctaaagatcgggccacagcaatgctgggcacacatgttatctgggattttgggctacaatcatctgtcacccttgtaataccatggatcagcaacacccactacagggcgcatgcccgggatggagtgttcgattactataccacaggactggtcagtatctggtatcaaacaaactatgtagttccaattggggcacccaacacagcttacataatagcactagcggcagcccagaagaattttaccatgaaactgtgcaaagacaccagccacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagatagtgtgagtagggcacttacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagtagtcatcgactagacactggcgaagttccagcgctccaagctgctgaaattggggcatcgtcaaatactagtgatgagagtatgattgaaacacgatgcgttcttaactcacacagtacagcggagaccaccttggacagcttcttcagtagggcaggtttggtaggagagatagatctccctcttgagggtaccac-taatccaaatggttatgccaactgggacatagacataactggttacgcacaaatgcgcagaaaagtggagctgttcacctacatgcgctttgatgcggaattcacttttgttgcgtgcactcctactggtggggttgttccacaattactccagtatatgtttgttccccctggtgctcccaaaccagagtctagagagtcacttgcttggcagacagccacaaacccctcagtttttgtcaagttgactgatcccccggcacaggtctcagttccgtttatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagaacataaacaggagaaagaccttgagtatggagcgtgtcctaataatatgatgggcactttctcggtgcgaaccgtggggtcattaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaacccaaactatgccggtaa----ctccattaaaccgaccggcactagtcgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcacaatgactgggcgaatctcgtctgggaagacagctcccgcgacctattagtatcgtctaccaccgcccagggctgtgacacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactacccagtcagcttctctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagcgggccactctgagcccggtgactgcggaggcatcttaaggtgtcaacatggtgtagttggtatagtgtccacgggtggcaacgggctcgttggttttgctgatgtgagggatctcttgtggttagatgaagaggccatggagcaaggtgtgtccgactatattaag-gggctcggtgacgcgtttggaacaggcttcaccgatgctgtatccagggaagttgaagcccttaggaaccacctcatagggtctgatggagcagttgagaaaatcctaaagaaccttatcaagctgatttcagcgttagtaattgtgatcaggagtgattatgatatggtcaccctcacagcaactttagccctgattggttgtcatggaagtccttgggcttggattaaagccaaaacagcatccattttaggtatccccatcgcccagaagcagagtgcttcttggctaaagaaatttaatgatatggcgagtgccgccaagggtttagaatggatatccaacaaaattagtaagttcattgactggctcagggagaagattgttccagcagctaaggagaaagcagaatttttaaccaatttgaagcaattacca-ctgttagagaaccagatcacgaatttagagcagtccgctgcctcacaagaggaccttgaagctatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaagttccaaccattatacgctacggaagctaagcgagtctatgttctagagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattagaggctcaccgggcactggaaagtcccttgcgaccggtatcattgctcgggccatagcagacaagtatcactctagtgtgtactcacttccaccagatcctgaccattttgacgggtacaaacagcaagtggtcacagttatggatgatctgtgtcaaaatcctgacggcaaagacatgtcattattttgccagatggtgtccaccgtggattttatcccaccaatggcttctctcgaagaaaagggagtttctttcacatctaaatttgttatcgcatctaccaacgccagcaacattatagtgcctacagtgtctgactctgacgccattcgtcgcaggttttacatggattgcgacattgaggtgacagactcatacaaaacagacttgggtagactagacgctggacgggctgctaagttatgctctgaaaacaacaccgcaaacttcaaacgatgcagcccactagtgtgtgggaaagctattcaacttagggacaggaagtctaaggtcaggtacagcgtggacacagtggtttctgaacttattagagaacacaatagcagatccgctattggtaacacaattgaagcactattccaaggcccacccaagttcaggccaattagaatc---agtcttgaagagaagccagccccagacgctattagcgatctcctcgctagtgtagacagcgaggaagtgcgccaatactgt-agggagcaaggctggatcatccctgaaactcccaccaatgttgaacgacatcttaatagagcagtgctagtcatgcaatccatcgctactgtggtggcagtcgtctcactggtgtacgtcatttacaagctctttgcggggtttcaaggtgcgtattctggagctcccaagcaaatgctcaagaaacctgtcctccgcacggcaacagtgcagggtccgagtcttgactttgctctatccttgctgagaaggaacatcaggcaagtccaaacagatcaagggcattttactatgttaggtgtcagggatcgcttggccgttctcccacggcactcacagcccgggaagactatttgggtggagcataaacttgtgaacatccttgacgcaatcgagctggtggatgagcagggcgttaatttggaactcacattggtgacactagatactaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaactttagtgatcaacacagaacatatgccatcaatgtttgtcccagtgggggacgttgtgcagtacgggttcttgaaccttagtggaaagccaactcataggaccatgatgtacaatttccctacaaaagcaggacagtgtggaggtgtggtcacatcagtcggtaagattgtcggtatccacattggcggcaacgggcgccaggggttctgtgctggtctgaagaggagttacttcgcaagtgtgcagggtgagatccaatgggtgaagcctaacaaggaaactggtagactgaacatcaatggaccaactcgcactaagttggagcctagcgtatttcatgatgtgtttgaaggcaataaggaaccagcagttttaacaagtaaagaccctagattggaggtcgactttgagcaagccctgttttccaagtatgtgggcaatgttttacacgagcccgatgaatatgtgactcaagctgccctccactatgcgaatcaacttaaacaattggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgaaaacctggaagcaatagacctctgcactagtgccggatatccatacagcgcccttggcattaagaaaagagacattctcgaccccacaaccagggatgtgtctaagatgaaattctatatggataaatacgggctagatctgccatactctacctatgtaaaggatgagcttaggtccctggataaaatcaagaaaggaaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaagtgtttcatgctaaccctggcactgtgactggctcagcagtgggttgcaacccggacgtgttttggagcaaactaccgattctgctgcctgggtcactctttgccttcgactactcaggatatgatgctagtctcagcccggtatggttcagggctctagaagttgtgttacgggagattgggtattcagaggaggccgtgtccctaatagaaggaatcaaccacacccaccatgtgtaccggaacaaaacatactgtgtacttggtggaatgccctcagggtgttctggtacttccatctttaatacaatgatcaacaacatcatcattagaacccttttgatcaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgctggctagttacccctttcctattgattgccttgagttggctaagactggcaaagagtatggtttgaccatgacacctgcagacaaatcaccctgtttcaatgaagtaacatgggaaaatgctaccttcctgaagagagggttcttgccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcgcgcaacacccaagatcacgtgcgctccctgtgtctgttggcatggcacaatggtaaggatgaatatgagaagtttgtgagtgcaattagatcagttccagttggaaaagcgttggccattcctaactttgagaatctgagaagaaattggctcgaattgtttt--aa-tattacagctt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP274877.1_Enterovirus_A71_strain_Taipei/B4-01/2011_complete_genome
----------------------------------------------------------------------------------------------------------ct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gcaacttagaagc------------aatacacaacact-gatcaa-cagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccgggccgactatcaatagactgt-tcacacggttgaaggagaaagcgcccgttatccggctaactacttcgagaagcc-cagtagcaccatcgaggctgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgtggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaattaca-------gagttgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----tacctg----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctgtaatc-accctcgattttatattaacccttaatacaatcaaa-----catgggctcacaggtgtctacccagcgatccggctcccacgagaattccaattcagctacag-aaggctccaccattaattacactaccatcaactattacaaggactcctatgctgcgacagcgggcaaacagagcctcaaacaagatcctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcaccactgaagtctccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcactattggaaattccaccatcactacgcaggaggcggcaaatatcatagtcggttatggtgagtggccctcatactgctctgatgacgatgctacagcggtggacaagccaacgcgcccagatgtttcagtgaataggttttatacattggacactaagttgtgggaaaagt------------------catccaaggggtggtattggaaatttcctgatgtactgactgagaccggggtctttggccagaacgcacagtttcactatttatatagatcagggttttgcattcatgtgcaatgtaatgctagcaagttccaccaaggagcgctgttagtcgctatacttccagagtatgttatagggacagtggcaggcggcacaggaactg------aggacagccaccctccttacaaacaaacacaacctggcgccgatggttttgagctgcagcacccgtacgtgctcgatgctgggattcctatatcacaattgacagtgtgccctcaccaatggattaacctacggactaataactgtgccacaataatagtgccgtatatgaacacactgccttttgactctgccctgaaccactgcaattttgggctgttggtagtgcccattagtccattagattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgttctgagtttgcaggtctcagacaggcggtcactcaaggttttcccactgagctaaaaccagggacgaatcaatttttgaccaccgatgacggcgtctcagcacccattctaccaaatttccaccccactccgtgcattcacatacccggtgaagtcagaaacctgcttgaattgtgtcaagtggagaccatacttgaggttaacaa----------cgtacccaccaatgctaccagtctg------atggaaagactacgattcccggtgtccgcgcaagcgg------gaaaaggcgaattgtgtgccgtgtttagggccgaccctggaagagacggtccatggcaatcaacaatgctgggccagttgtgtggatattacacccagtggtcaggatcactggaggtcacttttatgtttaccgggtctttcatggccacgggtaaaatgctcatagcttatacacctcctggtggccctttacccaaagatcgggccacagcaatgctgggcacacatgttatctgggactttgggctacaatcatctgtcacccttgtaataccatggatcagtaatacccactacagagcgcatgcccgggatggtgtgttcgactactataccacaggactggtcagtatctggtatcaaacaaactacgtagttccaattggggcacccaacacagcttacataatagcactagcggcagcccagaagaattttaccatgaaattgtgtaaagacaccagtcacatattacagacagcctctattcagggagacaga--------gtggcagatgtgatcg---agagttctat--------------------------aggagatagtgtgagcagggcacttacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactagacactggtgaagttccagcgcttcaagctgctgaaattggggcatcgtcaaatactagtgatgagagtatgattgagacacgatgcgttcttaattcacacagcacggcagagaccaccttggacagcttcttcagtagggcaggattggtaggagagatagatctccctcttaagggtaccac-taatccaaatggttatgctaactgggatatagacataactggttacgcacaaatgcgcaggaaagtggagctgttcacctacatgcgctttgacgcggagttcacttttgttgcgtgcactcctactggtgaggttgttccacaattacttcagtatatgtttgttccccctggtgctcccaaaccagagtctagagaatcacttgcttggcagacagccacaaacccctcagtttttgtcaagttgactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcttaccagtggttttactatgggtaccccacgtttggagaacataaacaggagaaagaccttgagtatggagcgtgccccaataatatgatgggcactttctcggttcgaactgtggggtcatcaaagtccaagtaccctttagttgtcaggatatatatgagaatgaagcatgtcagggcgtggatacctcgtccgatgcgcaaccaaaactacctgtttaaagctaatccaaactatgccggtaa----ctccattaaaccgaccggcactagtcgtactgccat---tactac---------------------------------------tcttgga------------------------------------------aagttcggtcagcaatctggggccatctacgtgggtaacttcagagtggttaatcgtcacctcgctactcataatgactgggcgaaccttgtctgggaagatagctcccgcgacttattagtgtcgtttaccaccgcccagggctgtgatacaattgcacgatgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttctccaaacccagcctcatatatgtggaagctagcgagtattatcctgctagatatcaatcgcacctgatgctcgcagcgggccattctgagcccggcgactgcggaggcatcttaaggtgccaacatggtgtagttggtatagtgtccacaggtggcaacggactcgttggtttcgctgatgtgagggatctcttgtggttggatgaagaggccatggagcaaggtgtgtccgactatattaag-gggctcggtgacgcatttggaacaggcttcactgatgctgtatccagggaagttgaagctcttagaaaccacctcatagggtctgatggagcagtggaaaaaatactaaaaaaccttattaagctgatttcagcgttagtaattgtaattaggagtgattatgatatggtcaccctcacagcaactttagccctgattggttgtcatggaagtccctgggcttggattaaagccaaaacagcatccattttaggtatccccattgcacagaagcagagcgcttcttggttaaagaaatttaatgatatggcgagtgccgccaagggattagaatggatatccaataaaattagtaagtttattgactggctcagggagaagattgttccagcagctaaagagaaggcagaatttttaaccaatttgaagcaattgcca-ctattagagaatcagatcacgaacttagagcagtccgctgcctcgcaagaggaccttgaagctatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaaattccaaccattatacgccacggaagctaagcgagtctatgttctagagaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattagaggctcaccaggaactggaaagtcccttgcgaccggcatcattgctcgggccatagcagacaagtatcactctagtgtttactcacttccaccagaccctgaccactttgacggttacaaacagcaagtggttacagttatggatgacctgtgccagaatcctgacggcaaagatatgtcattattttgccagatggtatccaccgtggattttattccaccaatggcttctctcgaagaaaagggagtttcttttacgtctaaatttgtaatcgcgtctaccaacgccagtaacatcatagtgcccacagtgtctgattctgacgccattcgtcgcagattctacatggattgtgatattgaggtgacagattcatacaaaacagacttaggtagattagacgctggacgggctgctaagttatgctctgaaaacaacaccgcaaatttcaaacgatgcagcccactagtgtgtgggaaagctattcaacttagagacaggaaatccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatccgctattggtaacacaattgaagcactattccaaggcccacctaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagcgatctccttgctagtgtggacagtgaggaagtgcgccaatactgt-agggaacaaggctggattattcctgaaactcccaccaatgttgagcgacatcttaatagagcagtgctagtcatgcaatccatcgccactgtggtggcagtcgtttcactggtgtacgttatttacaagctctttgcggggtttcaaggtgcgtattctggagctcccaagcaagtgctcaaaaagcccgtcctccgcacggctacagtgcagggtccaagccttgactttgctctgtccttgctgaggaggaacatcaggcaagtccaaacagaccaagggcattttaccatgttaggtgtcagggatcgcctggctgttctcccacggcactcacagcccgggaaaactatttgggtggaacacaaacttgtgaacatccttgacgcggtcgagctggtggacgagcaaggcgttaatttggaactcacattggtgacattagatattaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaactctagtgatcaacacagaacatatgccatcaatgtttgtccctgtgggggacgtcgtgcagtacgggttcttaaacctcagtggaaaaccaacacataggaccatgatgtacaatttccctacaaaagcaggacagtgtggaggcgtggtcacatcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttctgcgctggtttgaagaggagctactttgcaagtgtgcaaggtgaaatccaatgggtgaagcctaacaaagaaactggtagactgaacatcaatggaccaactcgcaccaagttggagcctagtgtatttcatgatgtgtttgaaggcaacaaggaaccagcacttataccaagcaaagaccctagattggaggtcgactttgaacaagccctgttttccaagtatgtgggcaatgttttacacgagcccgatgaatacgtgactcaagctgccctccattatgcgaatcaactcaaacaattggatataaatactaacaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagacctctgcactagcgccgggtatccatacagtgctcttggtattaagaaaagagatattcttgaccccacaaccagggatgtgtctaagatgaaattctatatggataaatacggactagatctgccatattccacctatgtgaaggatgaacttagatccctggataaaatcaagaaaggaaagtcacgcctgatagaggctagcagcttgaatgattctgtctacctcagaatgacgtttgggcacctttacgaggtgtttcatgctaaccctggtactgtgactggctcagcagtgggttgcaacccagacgtgttttggagcaaactgccgattctgctgcctgggtcactctttgcctttgactattcaggatatgatgctagtctcagcccggtatggttcagagctctagaagttgtgttacgggagatcgggtattcagaagaggccgtgtccctaatagaaggaatcaaccacacccaccatgtgtaccggaacaaaacatactgtgtgcttggtggaatgccctcagggtgctccggtacttccatcttcatctcaatgatcaacaacatcatcattagaacccttttgatcaaaacctttaagggaatagacctggatgagttgaacatggtggcttatggggacgacgtgctggctagttacccttttcctattgattgccttgagttggctaagactggcaaagagtatggtttaaccatgactcctgcagacaaatcaccctgtttcaatgaagtaacatgggaaaatgctaccttcctgaagagagggttcttgccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcgcgtaacacccaagatcacgtgcgctccctgtgtctgttggcatggcacaatggtaaggatgagtatgagaagtttgtgagtacaattagatcagttccagttggaaaagcgttggccattcctaactttgagaatctgagaagaaattggctcgaattatttt--aa-tattacagttt-------------------------aaag---------------ctgaaccc-cactagaa-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ357376.1_Human_enterovirus_71_isolate_S0318-TW01_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-g-tggcgctagcactctggttctacggaacctttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aattt-gcaacttagaagc------------aatacgcaacact-gatcaa-cagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccgggccgactatcaatagactgt-tcacacggttgaaggagaaagcgcccgttatccggctaactacttcgagaagcc-tagtagcaccatcgaagctgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgtggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----tacctg----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctgtaatc-accctcgattttatattaacccttaatacaatcaaa-----catgggctcacaggtgtctacccagcgatccggctcccacgagaattccaattcagctacag-aaggctccaccattaattacactaccatcaactattacaaggactcctatgctgcgacagcgggcaaacagagcctcaaacaagatcctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcaccactgaagtctccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcactattggaaattccaccattactacgcaggaggcggcaaatatcatagtcggttatggtgagtggccctcatactgctctgatgacgatgctacagcggtggacaagccaacgcgcccagatgtttcagtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaaatttcctgatgtactgactgagaccggggtctttggccagaacgcacagtttcactatttatatagatcagggttttgcattcatgtgcaatgtaatgctagcaagttccatcaaggagcgctgttagtcgctatacttccagagtatgttatagggacagtggcaggcggcacaggaactg------aggacagccaccctccttacaaacaaacacaacctggcgccgatggttttgagctgcagcacccgtacgtgctcgatgctgggattcctatatcacaattgacagtgtgccctcaccaatggattaacctacggaccaataactgtgccacaataatagtgccgtatatgaacacactgcctttcgactctgccctgaaccactgcaattttgggctgttggtagtgcccattagcccattagattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgcaggtctcagacaggcggtcactcaaggttttcccactgagccaaaaccagggacgaatcaatttttgaccaccgatgacggcgtctcagcacccattctaccaaatttccacctcactccgtgtattcacatacccggtgaagtcagaaacctgcttgaattgtgtcaagtggagaccattcttgaggttaacaa----------cgtacccaccaatgctaccagtctg------atggaaagactacgattcccggtgtccgcgcaagcgg------gaaaaggcgaattgtgtgccgtgtttagggccgaccctggaagagacggtccatggcaatcaacaatgctgggccagttgtgtggatattacacccagtggtcaggatcactggaggtcacttttatgtttaccgggtcttttatggccacgggtaaaatgctcatagcttatacacctcctggtggtcctttacccaaagatcgggccacagcaatgctgggcacacatgttatctgggactttgggctacaatcatctgtcacccttgtaataccatggatcagtaacacccactacagagcgcatgcccgggatggagtgttcgactactataccacaggactggtcagtatctggtatcaaacaaactacgtagttccaattggggcacccaacacagcttacataatagcactagcggcagcccagaagaattttaccatgaaactgtgtaaagacaccagtcacatattacagacagcctctattcagggagacaga--------gtggcagatgtgatcg---agagttctat--------------------------aggagatagtgtgagcagggcacttacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactagacactggtgaagttccagcgctccaagctgctgaaattggggcatcgtcaaatactagtgatgagagtatgattgagacacgatgcgttcttaattcacacagcacggcagagaccaccttggacagcttcttcagtagggcaggattggtaggagagatagatctccctcttgagggtaccac-taatccaaatggttatgctaactgggatatagacataactggttacgcacaaatgcgcaggaaagtggagctgttcacctacatgcgctttgatgcggagttcacttttgttgcgtgcactcctactggtggggttgttccacaattacttcagtatatgtttgttccccctggtgctcccaaaccagagtctagagaatcacttgcttggcagacagccacaaacccctcagtttttgtcaagttgactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagaacataaacaggagaaagaccttgagtatggagcgtgtcccaataatatgatgggcactttctcggtgcgaactgtggggtcatcaaagtccaagtaccctttagttgtcaggatatatatgagaatgaagcatgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctgtttaaagctaatccaaactatgccggtaa----ctccattaaaccgaccggcactagtcgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggggccatctacgtgggtaacttcagagtggttaatcgtcacctcgctactcataatgactgggcgaacctcgtctgggaagacagctcccgcgacctattagtgtcgtctaccaccgcccagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttctccaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagcaggccactctgagcccggcgattgcgggggcattttaagatgtcaacatggtgtagttggcatagtgtccacgggtggcaacgggctcgttggtttcgctgatgtgagggatctcttgtggttggatgaagaggccatggagcaaggtgtgtccgactacattaag-gggctcggtgacgcatttggaacaggcttcactgatgctgtatccagggaagttgaagctcttagaaaccacctcatagggtctgatggagcagtggaaaaaatactaaaaaaccttattaagctgatttcagcgttagtaattgtaattaggagcgattatgatatggtcaccctcacagcaactttagccctgattggttgtcatggaagtccctgggcttggattaaagccaaaacagcatccattttaggtatccccatcgcacagaagcagagcgcttcctggctaaagaaatttaatgatatggcgagtgccgccaagggattagaatggatatccaataaaattagtaagttcattgactggctcagggagaagattgttccagcagctaaagagaaggcagaatttttaaccaatttgaagcaattgcca-ctattagagaatcagatcacgaacttagagcagtccgctgcctcacaagaggaccttgaagctatgtttgggaacgtgtcatacctcgccca---------tttctgtcgcaagttccaaccattatacgccacggaagctaagcgagtctatgttctagagaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattagaggctcaccaggcactggaaagtcccttgcgaccggtatcattgctcgggccatagcagacaagtatcactctagtgtgtactcacttccaccagatcctgaccactttgacgggtacaaacagcaagtggttacagttatggatgacctgtgccagaatcctgacggcaaagatatgtcattattttgccagatggtatccaccgtggattttattccaccaatggcttctctcgaagaaaagggagtttctttcacgtctaaatttgtaatcgcgtctaccaacgccagtaacatcatagtgcccacagtgtctgactctgacgccattcgtcgcagattccacatggattgtgacattgaggtgacagattcatacaaaacagacttgggtagattagacgctggacgggctgctaagttatgctctgaaaacaacaccgcaaatttcaaacgatgcagcccactagtgtgtgggaaagctattcaacttagagacaggaaatccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatccgctattggtaacacaattgaagcactattccaaggcccacccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagcgatctccttgctagtgtggacagtgaggaagtgcgccaatactgt-agggaacaaggctggattattcctgaaactcccaccaatgttgagcgacatcttaatagagcagtgctagtcatgcaatccatcgccactgtggtggcagtcgtttcactggtgtacgttatttacaaactctttgcggggtttcaaggtgcgtattctggagctcccaagcaagtgctcaaaaagcccgtcctccgcacggcaacagtgcagggtccaagccttgactttgctctatccttactgaggaggaacatcaggcaagtccaaacagaccaagggcattttaccatgttaggtgtcagggatcgcctggctgttctcccacggcactcacagcccgggaaaactatttgggtggaacacaaacttgtgaacatccttgacgcggtcgagctggtggacgagcagggcgtcaatttggaactcacaatggtgacattagatattaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaactctagtgatcaacacagaacatatgccatcaatgtttgtccctgtgggggacgtcgtgcagtacgggttcttaaacctcagtggaaaaccaacacataggaccatgatgtacaatttccctacaaaagcaggacaatgtgggggcgtggtcacatcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttctgcgctggtttgaagaggagctactttgcaagtgtgcaaggtgaaatccaatgggtgaagcctaacaaagaaactggtagactgaacatcaatggaccaactcgcaccaagttggagcctagtgtatttcatgatgtgtttgaaggcaacaaggaaccagcagttttaacaagcaaggaccctagattggaggtcgactttgaacaagccctgttttccaagtatgtgggcaatattttacacgagcccgatgaatacgtgactcaagctgccctccactatgcgaatcaacttaaacaattggacataaatactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagacctctgcactagcgccgggtatccatacagtgctcttggtatcaagaaaagagacattcttgaccccacaaccagggatgtgtctaagatgaaattctatatggataaatacggactagatctgccatactccacctatgtgaaggatgaacttagatccctggataaaatcaagaaaggaaagtcacgcctgatagaggctagcagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtgtttcatgctaaccctggtactgtgactggctcagcagtgggttgcaacccagacgtgttttggagcaaactgccgattctgctgcctgggtcactctttgcctttgactactcaggatatgatgctagtctcagcccggtatggttcagagctctagaagttgtgttacgggagattgggtattcagaagaggccgtgtccctaatagaaggaatcaaccacacccaccatgtgtaccggaacaaaacatactgtgtgcctggtggaatgccctcagggtgctccggtacttccatcttcaattcaatgatcaacaacatcatcattagaacccttttgatcaaaacctttaagggaatagatctggatgagttgaacatggtggcctatggggacgacgtgctggctagttacccttttcctattgattgccttgagttggctaagactggcaaagagtatggtttaaccatgactcctgcagacaaatcaccctgtttcaatgaagtaacatgggaaaatgctaccttcctgaagagagggttcttgccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcgcgtaacacccaagatcacgtgcgctccctgtgtctgttggcatggcacaatggtaaggatgagtatgagaagtttgtgagtacaattagatcagttccagttggaaaagcgttggccattcctaactttgagaatctgagaagaaattggctcgaattatttt--aa-tattacagttt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgtcaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>EF373575.1_Human_enterovirus_71_strain_E2002042-TW-CDC_polyprotein_gene_complete_cds
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-g-tggcgctagcactctggttctacggaacctttgtgcgcct-g-ttttacg---c--cccc---t----ccc-c-----aactt-gcaacttagaagc------------aacacacaacact-gatcaa-cagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccgggccgagtatcaacagactgt-tcacacggttgaaggagaaagcgcccgttatccggctaactacttcgagaagcc-tagtagcaccattgaagctgcagagtgtttcgctcagca--ctt-tcccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgtggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcctacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----tacctg----tttgtt-ggctttgtaccac-----taacctc--------------aaaatctataatc-accctcgattttatattaacccttaatacaatcaaa-----catgggctcacaggtgtctacccagcgatccggctcccacgagaattccaattcagctacag-aaggctccaccattaattacaccaccattaactattacaaggactcctatgctgcgacagcgggcaaacagagcctcaaacaagatcctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcaccactgaagtctccatccgctgaagcttgtggttacagtgatcgcgtggcacagctcactattggaaattccaccattactacgcaggaggcggcaaatatcatagtcggttatggtgagtggccctcatactgctctgatgacgatgctacagcggtggacaagccaacacgcccagatgtttcagtgaataggttttatacattggacaccaaattgtgggaaaagt------------------catccaaggggtggtattggaaattccctgatgtactgactgagaccggggtctttggccagaacgcacagtttcactatttatatagatcagggttttgcattcatgtgcaatgtaatgctagcaagttccatcaaggagcgctgttagtcgctatacttccagagtatgttatagggacagtggcaggcggcacaggaactg------aggacagccaccctccttacaaacaaacacaacctggcgccgatggttttgagctgcagcacccgtacgtgctcgatgctgggatccctatatcacaattgacagtgtgccctcaccaatggattaacctacggaccaataactgtgccacaataatagtgccgtatatgaacacactgcctttcgactctgccctgaaccactgcaattttgggctgttggtagtgcccattagcccattagattttgaccagggagcaactccggttatccctattacaatcaccctagctccaatgtgctctgagtttgcaggtctcagacaggcagttactcaaggttttcccactgagccaaaaccagggacgaatcaatttttgaccaccgatgatggtgtctcagcacccattctaccaaatttccaccccactccgtgtattcacatacccggtgaagtcagaaacctgcttgaattgtgtcaagtggagaccattcttgaggttaacaa----------cgtacccaccaatgctaccagtctg------atggaaagactacgattcccggtgtccgcgcaagcgg------gaaaaggcgaattgtgtgccgtgtttagggccgaccctggaagagacggtccatggcaatcaacaatgctgggccagttgtgtggatattacacccagtggtcaggatcactggaggtcacttttatgtttaccgggtctttcatggccacgggtaaaatgctcatagcttatacacctcctggtggccctttacccaaagatcgggccacagcaatgctgggcacacatgtcatctgggactttgggctacaatcatctgtcacccttgtaataccatggatcagtaacacccactacagagcgcatgcccgggatggagtgttcgactactataccacaggactggtcagtatctggtatcaaacaaactacgtagttccaattggggcacccaacacagcttacataatagcactagcggcagcccagaagaattttaccatgaaactgtgtaaagacaccagtcacatattacagacagcctctattcagggagacaga--------gtggcagatgtgatcg---agagttctat--------------------------aggagatagtgtgagcagggcacttacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactagacactggtgaagttccagcgctccaagctgctgaaattggggcatcgtctaataccagcgatgagagtatgattgagacacgatgcgttcttaattcacacagcacggcagagaccaccttggacagcttcttcagtagggcaggattggtaggagaaatagatctccctcttgagggtaccac-taatccaaatggttatgctaactgggatatagacataactggttacgcgcaaatgcgtaggaaagtggagctgttcacctacatgcgctttgatgcggagttcacttttgttgcgtgcactcctactggtggggttgttccacaattacttcagtatatgtttgttccccctggtgctcccaaaccagagtctagagaatcacttgcttggcagacagccacaaacccctcagtttttgtcaagttgactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagaacataaacaggagaaagaccttgagtatggagcgtgccccaataatatgatgggcactttctcggtgcgaaccgtggggtcatcaaagtccaagtaccctttagttgtcaggatatatatgagaatgaagcatgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctgtttaaagctaatccaaactatgccggtaa----ctccattaaaccgaccggcactagccgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggggccatctacgtgggtaatttcagagtggttaatcgtcacctcgctactcataatgactgggcgaacctcgtctgggaagatagctcccgcgacctattagtgtcgtctaccaccgcccagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttctccaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagcaggccactctgagcccggcgactgcgggggcattttaaggtgtcaacatggtgtagttggcatagtgtccacgggtggcaacgggctcgttggtttcgctgatgtgagggatctcttgtggttggatgaagaggccatggagcaaggtgtgtccgactacattaag-gggctcggtgacgcatttggaacaggcttcactgatgctgtatccagggaagttgaagctcttagaaaccacctcatagggtctgatggagcagtggaaaaaatactaaagaaccttattaagctgatttcagcgttagtaattgtaattaggagtgattatgatatggtcaccctcacagcaactttagccctgattggttgtcatggaagtccctgggcatggattaaagccaaaacagcatccattttaggtatccccatcgcacagaagcagagcgcttcctggctaaagaaatttaatgatatggcgagtgccgccaagggattagaatggatatccaacaaaattagtaagttcattgactggctcagagagaagattgttccagcagctaaagagaaggcagaatttttaaccaatttaaagcaattacca-ctattagagaatcagatcacgaacttagagcagtccgctgcctcacaagaggaccttgaagctatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaagttccaaccattatacgccacggaagctaagcgtgtctatgttctagagaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattagaggctcgccaggcactggaaagtcccttgcgaccggtatcattgctcgggccatagcagacaagtatcactctagtgtgtactcacttccaccagatcctgaccactttgacggttacaaacagcaagtggtcacagttatggatgacctgtgccagaatcctgacggcaaagatatgtcattattttgccaaatggtatccaccgtggattttattccaccaatggcttctctcgaagaaaagggagtttctttcacgtctaaatttgtaatcgcgtctaccaacgccagcaacatcatagtgcccacagtgtctgactctgacgccattcgtcgcagattctacatggattgtgacattgaggtgacagactcatacaaaacagacttgggtagactagatgctggacgggctgctaagttatgctctgaaaacaacaccgcaaatttcaaacgatgcagcccactagtgtgtgggaaagctattcaacttagagacaggaaatccaaggtcaggtacagcgtggacacagtggtctctgaacttattagagaatataatagcagatccgctattggtaacacaattgaagcactattccaaggcccacccaagttcaggccaattagaatc---agtcttgaggagaagccagccccagacgctattagcgatctccttgctagtgtggacagtgaggaagtgcgccaatactgt-agggaacaaggctggattattcctgagactcccaccaatgttgaacgacatcttaatagagcagtgctagtcatgcaatccatcgccactgtggtggcagtcgtttcactggtgtacgttatttacaagctctttgcggggtttcaaggtgcgtattctggagctcccaagcaagtgctcaaaaagcccgtcctccgcacggcaacagtgcagggtccaagccttgacttcgctctatccttgctgaggaggaacatcaggcaagtccaaacagaccaagggcattttaccatgttaggcgtcagggatcgcctggctgttctcccacgacactcacagcccgggaaaactatttgggtggaacacaaacttgtgaacgtccttgacgcggtcgagctggtggacgagcagggcgttaatttggaactcacattggtgacattagatgttaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaaccctagtgatcaacacagaacatatgccatcaatgtttgtccctgtgggggacgtcgtgcagtacggattcttaaacctcagtggaaaaccaacacataggaccatgatgtacaatttccccacaaaagcaggacaatgtggaggcgtggtcacatcagtcggtaagattgttggcattcacattggcggcaacgggcgccaagggttctgcgctggtttgaagaggagctactttgcaagtgtgcaaggtgaaatccaatgggtgaaacctaacaaggaaactggtagactgaacatcaatggaccaactcgcaccaagttggagcctagtgtatttcatgatgtgtttgaaggcaacaaggaaccagcagttttaacaagcaaagaccctagattggaggtcgactttgaacaagccctattttccaagtatgtgggcaatgttttacacgagcctgatgaatacgtgactcaagctgccctccactatgcgaatcaacttaaacaattggacataaatactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagacctctgcactagcgccgggtatccatacagtgcccttggtatcaagaaaagagacattcttgaccccacaaccagggatgtgtctaagatgaaattctatatggataaatacggactagatctgccatactccacctatgtgaaggacgaacttagatccctggataaaatcaagaaaggaaaatcacgcctgatagaggctagcagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtgtttcatgctaaccctggtactgtgactggctcagcagtgggttgcaacccagacgtgttttggagcaaactgccgattctgctgcctgggtcactctttgcctttgactactcaggatatgatgctagtctcagtccggtatggttcagagctctagaagttgtgttacgggagattgggtattcagaagaggccgtgtccctaatagaaggaatcaaccacacccaccatgtgtaccggaacaaaacttactgtgtacttggtggaatgccctcagggtgctctggtacttccatcttcaattcaatgatcaacaacatcatcattagaacccttttgatcaaaacctttaagggaatagatctggatgagttgaacatggtggcctatggggacgacgtgctggctagttacccttttcctattgattgccttgagttggctaagactggcaaagagtatggtttaaccatgactcctgcagacaaatcaccctgtttcaatgaagtaacatgggaaaatgctaccttcctgaagagagggttcttgccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcgcgtaacacccaagatcacgtgcgctccctgtgtctgttggcatggcacaatggtaaggatgagtatgagaagtttgtgagtacaattagatcagttccagttggaaaagcgttggccattcctaactttgagaatctgagaagaaattggctcgaattgtttt--aa-tattacagttt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaa-------------------------------------------------------------------------------------------------------
>DQ341365.1_Human_enterovirus_71_isolate_PP37-MAL-01_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-g-tggcgctagcactctggttctgcggaacctttgtgcgcct-g-ttttacg---c--cc-c---c----ccc-c-----aattt-gcaacttagaagc------------aatacacaacact-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccgggccgagtatcaatagactgt-tcacgcggttgaaggagaaagcgcccgttatccggctaactacttcgagaaacc-tagtagcaccattgaagctgcagagtgtttcgctcggca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgtggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttacattgactgcttatggtgacaattata-------gaattgttaccatatagctattggattggtcatccgg--tgtgcaatagagctattata-----tacctg----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctataacc-accctcgattttatattaaccctcaatacaatcaaa-----catgggctcacaggtgtctactcagcgatccggctcccacgagaactccaattcagctacag-aaggctccaccattaattacactaccatcaactattacaaagactcctatgctgcgacagcgggcaaacagagcctcaagcaagaccctgataaatttgctaaccctgtcaaggacattttcactgaaatggctgcaccactgaagtctccatccgctgaggcttgtggttacagtgatcgcgtggcacaactcaccattggaaactccaccatcactacacaggaggcggcgaatattatagtcggttatggtgagtggccctcatactgctctgatgacgatgctacagcggtggacaagccaacgcgcccagatgtttcagtgaacaggttttatacgttggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagaccggagtctttggccagaatgcacagtttcactatttatataggtcaggattttgcattcatgtgcaatgtaatgctagcaagttccatcaaggagcgttgttagtcgccatacttccagagtatgttatagggacagtggcaggcggcacaggaactg------aggacagccaccctccttacaaacaaacacaacctggtgccgatggttttgagttgcagcacccgtacgtactcgatgctgggattcctatatcacaattaacagtgtgcccccaccaatggattaacctacggaccaataactgtgccacaataatagtgccgtatatgaacacactgcctttcgactctgccctgaatcattgcaactttgggctgttggtagtgcccattagcccactagattttgaccaaggggcaactccagttatccctattacaatcactctagctccaatgtgctctgagtttgcaggtctcagacaggcggtcactcaaggttttcccaccgagccaaaaccaggaacgaatcaatttttgaccaccgacgacggtgtctcagcacccattctaccaaatttccaccccactccatgtattcacatacccggtgaagtcagaaacctgcttgaattgtgtcaagtggagaccattcttgaggttaacaa----------tgtacccaccaatgccaccagtctg------atggaaaggctacgattcccggtgtccgcgcaagcgg------gaaaaggtgaattgtgtgccgtgtttagggccgaccctggaagagacggtccatggcaatcaacaatgctgggtcagttgtgtggatattacacccagtggtcaggatcactggaggttacttttatgttcaccgggtctttcatggccacgggtaaaatgctcatagcttatacacctcctggcggccccttacccaaagatcgggccacagcaatgctgggcacacatgttatctgggattttggcctacaatcatctgtcacccttgtaataccatggatcagcaacacccactacagagcgcatgcccgggatggagtgttcgattactataccacaggactggttagtatctggtatcagacaaactacgtggttccaattggggcacccaatacagcttacataatagcactagcggcagcccagaagaattttaccatgaaactgtgcaaagacaccagtcacatattacagacagcctctattcagggagataga--------gtggcagatgtgatag---agagctctat--------------------------aggagatagtgtgggtagggcacttacccaggccctgccagct--------ccaacaggtcagaacacgcaggtgagcagtcatcgactagacactggtgaagttccagcgctccaagctgctgaaattggggcatcgtcaaatactagtgatgagagtatgattgagacacgatgcgttcttaattcacacagtacagcagagaccaccctggacagcttcttcagtagggcaggcttggtaggagagatagatctccctcttgagggtaccac-taatccaaatggttatgctaattgggatatagacataactggttacgcacaaatgcgcaggaaagtggagctgttcacctacatgcgctttgatgcggagttcacttttgttgcgtgcactcctactggtggggttgtcccacaattacttcagtatatgtttgttccccctggtgctcccaaaccagagtctagagaatcacttgcttggcagacagccacaaacccctcagtttttgtcaagttgactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagaacacaagcaggagaaagaccttgagtatggagcgtgccctaataacatgatgggcactttctcggtgcgaactgtggggtcatcaaagtccaagtaccctttggttgtcaggatatatatgagaatgaagcatgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctgtttaaagccaatccaaactatgccggcaa----ctccatcaaaccgaccggtactagtcgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataatgactgggcgaacctcgtctgggaagatagctcccgcgacctactagtgtcgtctaccaccgcccagggctgtgatacaattgcacgttgtgactgccaaacaggagtgtactattgtaactctaagagaaagcactatccagtcagcttctccaagcccagcctcatatatgtggaggctagcgagtattaccctgctagataccaatcgcacctgatgcttgcagcaggccactctgagcccggcgactgcgggggcatcttaaggtgtcaacatggtgtagttggtatagtgtccacgggtggcaacgggctcgttggttttgctgatgtgagggatctcttgtggttggatgaagaggccatggagcaaggtgtgtctgactacattaag-gggctcggcgacgcatttggaacaggtttcactgatgctgtatccagggaagttgaagccctcaggaaccacctcataggatctgacggagcagtggaaaaaatcctaaagaaccttattaagttgatttcagcgttagtaattgtaattaggagcgattatgatatggtcaccctcacagcaactctagccctgattggttgtcatggaagtccctgggcttggattaaagccaaaacagcatccattttaggtatccccatcgcccagaagcagagcgcttcctggctaaagaaatttaatgatatggcgagtgctgccaagggtttagaatggatatctaacaaaattagtaagttcattgactggctcagggagaagattgttccagcagctaaagagaaagcagaatttttaaccaatttgaagcaattacca-ctattagagaaccagatcacgaacttggagcagtccgctgcctcgcaagaggacctcgaagctatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaagttccaaccattatacgccacggaggccaagcgagtctatgttctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattagaggctcaccaggcactggaaagtcccttgcgaccggcatcatcgcccgggccatagcagacaaataccactctagtgtgtactcactcccaccagatcctgaccattttgacgggtacaaacagcaagtggttacagttatggatgacctgtgccagaatcctgacggcaaagacatgtcattattttgccagatggtatccaccgtggattttattccaccaatggcttctctcgaagaaaagggagtttctttcacatctaaatttgttatcgcatctaccaacgccagcaacattatagtgcccacagtgtctgactctgacgccatccgtcgcaggttctacatggattgcgacattgaggtcacagactcatacaaaacagacttgggtagactagacgctgggcgggctgctaagttatgctctgaaaacaacaccgcaaatttcaaacgatgcagcccactagtgtgtgggaaagctattcaacttagagacaggaaatccaaggtcaggtatagcgtggacacagtggtctctgaacttattagagaatacaatagcagatccgctattggtaacacaattgaagcattattccaaggcccacccaagttcaggccaattaggatc---agcctcgaggagaagccagccccagacgctattagcgatctccttgctagtgtggatagcgaggaagtgcgccaatactgt-agggaacaaggctggattatccctgaaactcccaccaatgttgaacgacatcttaatagagcagtgctagtcatgcaatccatcgctactgtggtggcagtcgtctcactggtgtacgtcatttacaagctctttgcggggtttcaaggtgcgtattctggggctcccaagcaagtgctcaagaagcctgtcctccgcacggcaacagtacagggtccaagccttgattttgccttatccttgctgaggaggaacatcaggcaagtccaaacagaccaagggcattttaccatgttgggtgtcagggatcgcctggctgttctcccacggcactcacagcccgggaagactatttgggtggaacacaaacttgtgaacatccttgatgcagtcgagctggtggacgagcagggcgttaatttggaactcacattggtgacactagatattaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaactctagtgatcaacacagaacatatgccgtcaatgtttgtccctgtgggggacgtcgtgcagtacgggttcttgaacctcagtggaaagccaacacataggaccatgatgtacaatttccctacaaaagcaggacagtgtggaggcgtggtcacatcagtcggtaagattgttggtattcacattggtggcaacgggcgccaagggttctgcgctggtttgaagaggagctactttgcgagtatgcaaggtgagatccaatgggtgaagcctaacaaggaaactggcagactaaacatcaatggaccaactcgcactaagttggagcctagtgtatttcatgatgtgtttgaaggcaacaaggaaccagcagttttaacaagtaaagaccctagattggaggtcgactttgaacaagccctgttttccaagtatgtgggcaatgttttacacgagcccgatgaatatgtgactcaagctgccctccactatgcgaatcaacttaaacaattggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgaaaacctggaagcaatagacctctgcactagtgctgggtatccatacagtgcccttggtatcaagaaaagagacattctcgaccccataaccagggatgtgtccaagatgaaattctacatggataaatacggactagatctaccatactctacctatgtgaaggatgaacttagatctctggataaaatcaagaaaggaaagtcacgtctgatagaggccagcagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtgtttcatgctaaccctggtactgtgactggctcagcagtaggttgcaacccagacgtgttttggagtaaactaccgattctgctgcctgggtcactctttgcctttgactactcaggatatgatgctagtctcagcccggtatggttcagggctctagaagttgtgttacgggagattgggtattcagaggaggccgtgtccctaatagaaggaatcaaccacacccaccatgtgtaccggaacaaaacatactgtgtgcttggtgggatgccctcagggtgctctggtacttctatcttcaattcaatgatcaacaacatcatcattagaacccttttgatcaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgctggccagttacccttttcctattgattgccttgagttggctaagactggcaaagagtatggtttgaccatgactcctgcagacaaatcaccctgtttcaatgaagtaacatgggaaaatgctaccttcctgaagagagggttcttaccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaggacgcgcgtaacacccaggatcacgtgcgctccctgtgtctattggcatggcacaatggtaaggatgaatatgaaaagtttgtgagtgcaattagatcagttccagttggaaaagcgttggccattcctaactttgagaatctgagaagaaattggctcgaattgtttt--aa-tattacagttt-------------------------aaag---------------ctggaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>DQ341366.1_Human_enterovirus_71_isolate_SB2864-SAR-00_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-g-tggcgctagcactctggttctacggaacctttgtgcgcct-g-ttttacg---c--cc-c---c----ccc-c-----aattt-gcaacttagaagc------------aatatacaacact-gatcaa-cagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccgggccgagtatcaatagactgt-tcacgcggttgaaggagaaagcgcccgtcatccggctaactacttcgagaaacc-tagtagcaccattgaagctgcagagtgtttcgctcggca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgcggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgtggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atccttacattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----tacctg----tttgtt-ggctttgtaccat-----taacctt--------------aaaatctataacc-accctcgatttcatattaacccttaatacaatcaaa-----catgggctcacaggtgtctactcagcgatctggctcccacgagaattccaactcagctacag-aaggctctaccattaattacactaccattaactattacaaagactcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataaatttgctaaccctgtcaaggacattttcactgaaatggctgcaccactgaagtctccatccgctgaagcttgtggttacagtgatcgcgtggcacaactcaccattggaaactccaccatcactacacaggaggcggcgaatatcatagtcggttatggtgagtggccctcatactgctctgatgacgatgctacagcggtggacaaaccaacgcgcccagatgtttcagtgaataggttttatacattggacactaaattgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtactgactgagactggggtctttggccagaacgcacagtttcactatttatataggtcagggttttgcattcatgtgcaatgtaatgctagcaagttccatcaaggagcgctgttagtcgctatacttccagagtatgttatagggacagtggcaggcggcacaggaactg------aggacagccaccctccttacaaacaaacacaacctggcgccgatggttttgagctgcagcacccgtacgtgctcgatgctgggattccaatatcacaattgacagtgtgcccccaccaatggattaacctacggaccaataactgtgccacaataatagtgccgtatatgaacacactgcctttcgactctgccctgaaccattgcaactttgggctgctggtggtgcctattagcccactagattttgaccaaggggcaaccccggttatccctattacaatcactctagctccaatgtgctctgagtttgcaggtctcaggcaggcagtcactcaaggttttcccactgagccaaaacccggaacgaatcagtttttgaccaccgatgacggcgtctcagcacccattctaccaaatttccaccccactccatgtattcacatacccggtgaagtcagaaacctgcttgaattgtgtcaagtggagaccattcttgaggttaacaa----------cgtacccaccaatgccaccagtctg------atggaaaggctacgattcccggtgtccgcgcaagcgg------gaaaaggtgaattgtgtgccgtgtttagggccgaccctggaagagacggcccatggcaatcaacaatgctgggccagttgtgtggatattacacccagtggtcaggatcactggaggttacttttatgtttaccgggtcttttatggccacgggtaaaatgctcatagcttatacacctcctggcggccccttacccaaagatcgggccacagcaatgctgggcacacatgttatctgggattttggcctacaatcatctgtcacccttgtaataccatggatcagcaacacccactacagagcgcatgcccgggatggagtgttcgactactataccacaggactggttagtatctggtatcaaacaaactacgtagttccaattggggcacccaacacagcttacataatagcactagcggcagcccagaagaattttaccatgaaactgtgcaaagacaccagtcacatattacagacagcctctattcagggagataga--------gtggcagatgtgatcg---agagctctat--------------------------aggagatagtgtgagtagggcacttacccaggccctgccagct--------ccaacaggtcagaacacgcaggtgagcagtcatcgactagacactggtgaagttccagcactccaagctgctgaaattggggcatcgtcaaatactagtgatgagagcatgattgagacacgatgcgttcttaattcacacagtacggcagagaccaccttggacagcttcttcagtagggcaggcttggtaggagagatagatctccctcttgagggtaccac-taatccaaatggttatgctaattgggatatagacataactggttacgcacaaatgcgcaggaaagtggagctgttcacctacatgcgctttgatgcggaattcacttttgttgcgtgcactcctactggtggggttgttccacaattacttcagtatatgtttgttccccctggtgctcccaaaccagagtctagagaatcacttgcttggcagacagccacgaacccctcagtttttgtcaagttgactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagaacataaacaggagaaagaccttgagtatggagcgtgtcccaataatatgatgggcactttctcggtgcgaaatgtggggtcatcaaagtccaagtaccctttggttgtcaggatatatatgagaatgaagcatgtcagggcgtggatacctcgcccgatgcgcaaccaaaactacctgtttaaagccaatccaaactatgccggtag----ctccattaaaccgaccggcactagtcgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcagtctggggccatctacgtgggcaacttcagagtggttaatcgtcaccttgctactcataatgactgggcgaacctcgtctgggaagacagctcccgcgacctattagtgtcgtctaccaccgcccagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttctctaaacccagcctcatatatgtggaagctagcgagtattatcctgctagataccaatcgcacctgatgcttgcagcaggccactctgagcccggcgactgcgggggcatcttaaggtgtcaacatggtgtggttggtatagtgtccacgggtggtaacgggctcgttggttttactgatgtgagggatctcttgtggttggacgaagaggccatggagcaaggtgtgtccgactacattaag-gggctcggtgacgcatttggaacaggtttcactgatgctgtatccagagaagttgaagcccttaggaaccaccttataggatcagatggagcagtggaaaaaatcctaaagaaccttattaagctgatttcagcgttagtaattgtaattaggagcgattatgatatggtcaccctcacagcaactttagccctgattggttgtcatggaagtccctgggcttggattaaagccaaaacagcatccattttaggtatccccatcgcccagaaacagagcgcttcctggttaaagaaatttaatgatatggcgagtgccgccaagggtttagagtggatatccaacaaaattagtaagttcattgactggctcagggagaagattgttccagcagctaaagagaaagcagaatttttaaccaatctgaagcaattacca-ctattggagaatcagatcacgaacttagagcagtccgctgcctcacaagaggaccttgaagctatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaagttccaaccattatacgccacggaagccaagcgagtctatgttctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattagaggctcaccaggcactggaaagtcccttgcgaccggaatcattgctcgggccatagcagataaataccattctagtgtgtactcactcccaccagatcctgaccattttgacgggtacaaacagcaagtggttacagttatggatgacctgtgccagaatcctgacggcaaagacatgtcattattttgccagatggtatccaccgtggattttattccaccaatggcttctctcgaagaaaagggagtttctttcacatctaaatttgttatcgcatctaccaacgccagcaacattatagtgcccacagtgtctgactctgacgccattcgtcgcaggtttcacatggattgcgacattgaggtcacagactcatacaaaacagacttgggtagactagacgctgggcgggctgctaagctatgctctgaaaacaacaccgcaaatttcaaacgatgcagcccactagtgtgtgggaaagctattcaacttagagacaggaaatccaaggtcagatacagcgtggacacagtggtctctgaacttattagagaatacaatagcagatccgctattggtaacacaatcgaagcactattccaaggcccacccaagttcaggccaattaggatc---agtcttgaggagaagccagccccagacgctattagcgatctccttgctagtgtggacagcgaggaagtgcgccaatactgt-agggaacaaggctggatcatccctgaaactcccaccaatgttgaacgacatcttaatagagcagtgctaatcatgcaatccatcgctactgtggtggcagtcgtttcactggtgtacgtcatttacaagctctttgcggggtttcaaggtgcgtattctggagctcccaagcaagtgctcaagaagcccgtcctccgcacggcaacagtgcagggtccaagccttgactttgccctatccttgctgaggaggaacatcaggcaagtccaaacagaccaagggcattttaccatgttgggtgtcagagatcgcctggctattctcccacggcactcacagcccgggaagactatttgggtggaacacaaacttgtgaacatccttgacgcagtcgagctggtggacgagcagggcgttaatttggaactcacattggtgacactagatattaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaactctagtgatcaacacagaacatatgccgtcaatgtttgtccctgtgggggacgtcgtgcagtacgggttcttgaacctcagtggaaagccaacacataggaccatgatgtacaatttccctacaaaagcaggacagtgtggaggtgtggtcacatcagtcggtaagattgttggtattcacattggcggcaacgggcgccaagggttctgcgctggtttgaagagaagctactttgcgagtgtgcaaggtgaaatccaatgggtgaagcctaacaaggaaactggcagactgaacatcaatggaccaactcgcactaagttggagcctagtgtatttcatgatgtgtttgaaggcaacaaggaaccagcagttctaacaagtaaagaccctagattggaggtcgactttgaacaagccctgttttccaagtatgtgggcaatgttttacacgagcccgatgaatatgtgactcaagctgccctccactatgcgaatcaacttaaacaattggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgaaaacctggaagcaatagacctctgcactagtgccgggtatccatacagtgcccttggtatcaagaaaagagacattctcgaccccataaccagggatgtgtctaagatgaaattctacatggataaatacggactagatctgccatattccacctatgtgaaggatgaacttagatccctggataaaatcaagaaaggaaagtcacgcctgatagaggctagcagtttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggtactgtgactggctcagcagtaggttgcaacccagatgtgttttggagtaaactaccgattctgctgcctgggtcactctttgcctttgactactcaggatatgatgctagtctcagcccggtatggttcagagctctggaagttgtgttacgggagattgggtattcagaggaggccgtgtccctaatagagggaatcaaccacacccaccatgtgtaccggaacaaaacatactgtgtacttggtgggatgccctcagggtgctctggtacttccatctttaattcaatgatcaacaacatcatcattagaacccttttgatcaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggacgatgtgctggctagttacccttttcctattgattgccttgagttggctaagactggtaaagagtatggattgaccatgactcctgcagacaaatcaccctgtttcaatgaagtaacatgggaaaatgctaccttcctgaagagagggttcttaccagaccaccaatttccattcttaattcaccctacgatgcccatgagagagatccatgagtccattcgatggactaaggacgcgcgtaacacccaggatcacgtgcgctccctgtgtctgttggcatggcacaacggtaaggatgaatatgagaagtttgtgagtgcaattagatcagttccagttggaaaagcgttggccattcctaactttgagaatctgagaagaaattggctcgaattgtttt--aa-tattacagttt-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KR045291.1_Enterovirus_A71_isolate_THA_A575_polyprotein_gene_complete_cds
----------------------------------------------------------------------------------------------------------------------------cccc---t----ccc-c-----aattt-gcaacttagaagc------------aattcgcaacacc-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcagtaaactgt-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtaacgccattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgag-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaatcact-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctatcata-----taccta----tttgtt-ggttttgtaccac-----tgacctt--------------aaaatctgtaacc-actctcgactatatattgaccctcaatacaatcaaa-----catgggctcacaggtgtccactcaacgatccggctcccatgaaaactccaattcagctacag-aaggctctaccattaattacaccactatcaattattacaaagattcctatgctgcgacagcgggcaaacagagccttaaacaagaccctgataagtttgctaaccctgttaaggacattttcactgaggtggctgcacctctaaagtctccatctgctgaagcttgtggttacagcgatcgcgtggcacaactcaccattggaaactccaccattactacacaggaagccgcaaacattatagtcggctatggtgaatggccctcgtactgctccgacggtgacgctacagcagtggataagccaacgcgcccagatgtttccgtgaacaggttttatacattggacactaaactgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtgttgactgagaccggagtttttggccaaaatgcacagtttcactacttatataggtcagggttttgcattcatgtgcaatgcaacgctagcaagttccaccaaggagcgctgttagtcgctatacttccagagtatgtcatagggacggtggcaggcggcacaggaacgg------aggatagccaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgacgctggaatccctatatcacaattgacaatatgcccccatcaatggattaatctgcgaactaataactgtgccacaataatagtgccatatatgaacacactaccttttgactccgccttgaaccattgcaattttgggttgttggtagtacccatcagcccattggattttgaccaaggggcaactccagttatccctattacaattactttagccccaatgtgttctgagtttgccggtctcaggcaagcagtcactcaaggtttccccactgagccaaagccagggacgaaccaattcttaaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccacaccatgtattcacatacctggtgaagtcagaaacctgctcgagttgtgccaagtggagactattcttgaagttaacaa----------cgtacccaccaatgctactagtctg------atggaaaggctacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgctgtgtttagggctgatcctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcagtggtcagggtcattggaggttacttttatgttcaccgggtcctttatggccacgggtaagatgctcatagcttatacacctcctggcggccccttacccaaagatcgagctacagcaatgctgggcacacatgttatctgggactttgggctacaatcatctgtcactcttgtgataccatggatcagtaatacccactacagggcgcatgcccgggatggagtgtttgactactataccacaggactggtcagcatctggtatcaaacaaattacgtagtcccaattggggcacccaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggtgctcacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagccatcgactagacaccggtgaagttccagcgctccaagctgccgagattggggcatcatcaaatactagtgatgagagtatgattgagacacgatgcgtccttaactcacacagtacagcagagactaccttggacagtttcttcagcagagcgggcttggtaggagagatagacctccctttagagggcaccac-caatccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctacatgcgctttgacgcggaatttacttttgttgcgtgcactcctactggtgaggttgttccacaattactccagtatatgtttgtcccccctggtgctcctaaaccagattctagggaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggagaaagatcttgaatatggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagggcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattatgccggtaa----ctccattaagccgaccggtactagtcgtaccgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcagtccggggccatctacgtgggcaacttcagagtggttaatcgtcatctcgctacccataatgactgggcaaaccttgtttgggaagacagctcccgcgacctattggtgtcgtccaccaccgcccagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttttctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcacacctgatgctcgcagcgggccactccgagcccggtgactgcgggggcatcttaaggtgccaacatggtgtagtcggtatagtgtccacgggcggcaacggactcgttggttttgctgatgtgagggatctcttatggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggcttggtgacgcgtttgggacgggcttcactgatgctgtatccagggaagttgaagcccttagaaaccaccttataggatctgatggagcagttgagaaaattctaaagaaccttattaagttgatttcagcattagtaattgtgattaggagcgactatgatatggtcaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcatccccattgcccagaagcagagtgcttcttggctaaagaagttcaacgatatggcgagtgccgccaagggcttagagtggatatccagcaaaattagcaaattcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaatttgaagcaattacca-ctgctagagaatcaaatcacaaatttagaacagtccgctgcctcacaagaagaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgccgaaagttccaaccattgtacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtaatggacgatctgtgtcagaatcccgatggcaaggatatgtcactattttgccagatggtgtccaccgtggatttcatcccaccaatggcttctcttgaggaaaagggagtttcttttacatctaaatttgttatcgcatctaccaactccagcaacattatagtgcctacagtgtctgactctgatgccattcgacgcaggttttacatggattgtgacattgaagtgacggactcatacaaaacagacttgggtagattagatgctggacgggctgctaagttatgttctgaaaataacactgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaactcattagagaatacaatagcagatctgctattggcaacacaattgaagctctattccaaggcccgcccaagtttaggccaattagaatt---agtcttgaagagaaaccagccccagacgctattagcgatctcctcgccagtgtagacagcgaggaagtgcgccaatactgt-agggagcaaggttggatcatccctgaaactcccactaatgttgaaaggcaccttaacagagcagtactagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacagcaacagtgcagggtccaagtcttgactttgctctatccctgctgagaagaaacatcaggcaagcccaaacagatcaggggcattttaccatgttaggtgtcagggatcacttggctgtcctcccacgacacgcacaacccgggaagactatttgggtggagcacaagcttgtgagcgtcctcgacgcaatcgaactagtggatgaacagggcgttaatttggaactcacattggtgacactagacactaatgaaaaatttagagacatcaccaagttcattccagaaaccattagtggcgctagtgatgcaactttagtgatcaatacagaacatatgccatcaatgtttgtcccagtgggggacgtcgtgcagtatgggttcttgaaccttagtggaaagccaacgcacagaaccatgatgtacaatttccccacaagagcaggacaatgtggaggtgtagtcacatcagtcggtaagattgttggcattcatattggcggtaatgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtatgcagggtgagatccaatgggtgaagcctaacaaagaaactggtagactgaacatcaatggaccaactcgcactaagctggagcctagtgtgtttcatgatgtatttgaaggcaataaggaaccagcagttttatcaagtaaagaccctagattggaggtcgactttgagcaagccctattttccaagtatgtgggcaatgttttacatgagcccgatgaatatgtgactcaagctgctctccactatgcgaatcaactcaaacaattggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagacctctgtactagtgccggatatccatacagcgcccttggaatcaagaaaaaagacattctcgaccccgtatccagggatgtgtctaagatgaaattttatatggataaatatggtctagatctgccatactccacctacgtgaaggatgagcttaggcctctggataaaattaagaagggaaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggcactgtgaccggctcggcagtgggttgcaacccagacgtgttttggagtaagctgccgattctactgcctgggtcactctttgcttttgactactcaggatatgatgctagcctcagcccggtgtggttcagggccctagaagttgtgctaagggaaattgggtttacagaggaggccgtgtccctaatagaaggaatcaaccacacccaccacgtgtaccggaacaaaacatactgtgtacttggtgggatgccctcaggatgttctggtacctctatctttaactcaatgatcaacaatatcatcattagaaccctcttaatcaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggatgatgtgttggctagttatcctttccctatcgattgccttgagttggccaagactggcagagagtatggtttaactatgacacctgcagacaaatcaccctgttttaatgaagtgacatgggaaaacgctaccttcctcaagagggggttcttaccagactaccaatttccattcctaattcaccccacgatgcccatgaaagagatccatgagtccattcgatggactaaagacgcacgcaacacccaagaccacgtgcgctccctgtgtctgttggcatggcataatggtaaggatgaatatgagaaatttgtgagtacaattagatcagttccagttgggaaagcgttggccattcctaattttgaaaatttgagaagaaattggcttgaattatttt--aa-tattacagc-t-------------------------gaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-acta--------gtgggggtaaatttgt-ta-taaca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KR045296.1_Enterovirus_A71_isolate_THA_A761_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaataaactgt-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-cagtaacgctattgaaactgcagagtgtttcgctccaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcacattggctgcttatggtgacaatcact-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctatcata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctgtaacc-actctcgactatatattgaccctcaatacaatcaaa-----catgggctcacaggtgtccactcaacgatccggctcccatgaaaactccaattcagctacag-aaggctctaccattaattacaccactattaattattacaaagattcctatgctgcgacagcgggcaaacagagccttaaacaagaccctgataagtttgctaaccctgttaaggacattttcactgaggtggctgcacctctaaagtctccgtctgctgaagcttgtggttacagcgatcgcgtggcacaactcaccattggaaactccaccattactacacaggaagccgcaaacatcatagtcggctatggtgaatggccctcgtactgctccgatggtgatgctacagcagtggataagccaacgcgcccagatgtttccgtgaacaggttttatacattggacactaaactgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtattgactgagaccggagtttttggccaaaacgcacagtttcactacttatataggtcagggttttgcatccatgtgcaatgcaacgctagcaagttccaccaaggagcactgttagtcgctatacttccagagtatgtcatagggacggtggcaggcggcacaggaacgg------aggacagccaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgacgctgggatccctatatcacaattgacaatatgcccccatcaatggattaatctgcgaactaataactgtgccacaataatagtgccatatatgaacacactaccttttgactccgccttgaaccattgcaattttggattgttggtagtgcccatcagcccattggattttgaccaaggggcaactccagttatccctattacaatcactctagccccaatgtgttctgagtttgctggtctcaggcaagcagtcactcaaggcttccccactgagccaaagccagggacgaaccaattcttaaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccacaccatgtattcacatacccggtgaagtcagaaacctgctcgagttgtgccaagtggagactattcttgaggttaataa----------cgtacccaccaatgctactagtctg------atggaaaggctacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgctgtgtttagggctgatcctggaagagacggtccatggcagtcaacgatgctgggtcagttgtgtggatactacactcagtggtcagggtcattggaggttactttcatgttcaccgggtcctttatggccacgggtaagatgctcatagcttatacacctcctggtggccccttacccaaagatcgagctacagcaatgctgggcacacatgttatctgggactttgggctacaatcatctgtcactcttgtgataccatggatcagtaatacccactacagggcgcatgcccgggatggagtgtttgactactataccacaggactggtcagcatctggtatcaaacaaattacgtagtcccgattggggcacccaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaaactgtgcaaagacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggtgctcacccaggccctgccagca--------cctacaggtcaaaacacacaggtgagcagccatcgactagacaccggtgaagttccagcgctccaagctgccgagattggggcatcatcaaatactagtgatgagagtatgattgagacacgatgtgttcttaactcacacagtacagcagagactaccttggacagtttcttcagcagagcgggcttggtaggagagatagacctccccttagagggcaccac-caatccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgacgcggaatttacttttgttgcgtgcactcctactggtgaggttgttccacaattactccagtatatgtttgtcccccctggtgctcctaaaccaaattccagggaatctctcgcttggcagacagccacaaacccttcagtttttgtcaagttaactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggagaaagatcttgaatatggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtaccctttggttgtcagaatatatatgagaatgaagcatgtcagggcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaactatgccggtaa----ctccattaagccgactggtaccagtcgtaccgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcagtccggggccatctacgtgggcaacttcagagtggttaatcgtcatctcgctacccataatgactgggtaaaccttgtttgggaagacagctcccgcgacctattagtgtcgtccactaccgcccagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttttctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcacacctgatgctcgcagcgggccactccgagcccggtgactgcgggggcatcttaaggtgccaacatggtgtagtcggtatagtgtccacgggcggcaacggactcgttggttttgctgatgtgagggatctcttatggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggcttggtgacgcgtttgggacaggcttcactgatgctgtatccagggaagttgaagcccttagaaatcaccttataggatctgatggagcagttgagaaaattctaaagaaccttattaagttgatttcagcattagtaattgtgattaggagcgattatgatatggtcaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcatccccattgcccagaagcagagtgcttcttggctaaagaagttcaacgatatggcgagtgccgccaagggcttagagtggatatccagcaaaattagcaaattcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaaccaatttgaagcaattacca-ctgctagagaaccaaattacaaatttagaacagtccgctgcctcacaagaagaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgccgaaagttccaaccattatacgccacagaagctaagcgggtctatgttctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttgtcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtaatggacgatctgtgtcagaaccccgatggcaaggatatgtcactgttttgccagatggtgtccaccgtggatttcatcccaccaatggcttcccttgaggaaaagggagtttcttttacatctaaatttgttatcgcatccaccaactccagcaacattatagtgcctacagtgtctgactctgatgccattcgacgcaggttttacatggattgtgacattgaagtgacggactcatacaaaacagacttgggtagattagatgctggacgggctgctaagttatgttctgaaaataacactgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctccgaacttattagagaatacaatagcagatctgctattggcaacacaattgaagcactattccaaggcccgcccaagtttaggccaattagaatt---agtcttgaagagaagccagccccagacgctattagcgatctcctcgccagtgtagacagcgaggaagtgcgccaatactgt-agggagcaaggttggatcatccctgaaactcccactaatgttgaaaggcaccttaacagagcagtactagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaagtgctcaagaaacccgtcctccgcacagcaacagtgcagggtccaagtcttgactttgctctatccctgctgagaagaaacatcaggcaagtccaaacagatcaggggcattttaccatgttaggtgtcagggatcacttggctgtcctcccacgacacgcacaacccgggaagaccatttgggtggagcacaagcttgtgaacgtcctcgacgcaatcgaactagtggatgaacagggcgttaatttggaactcacattggtgacactagacactaatgaaaaatttagagacatcaccaagttcattccagaaaccattagtggcgctagtgatgcaactttagtgatcaatacagaacacatgccatcaatgtttgtcccagtgggggacgtcgtgcagtatgggttcttgaaccttagtggaaagccaacgcacagaaccatgatgtacaatttccccacaagagcaggacaatgtggaggtgtagtcacatcagtcggtaagattgttggcattcatattggcggtaacgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtgcgcagggtgagatccaatgggtgaagcctaacaaagaaactggtagactgaacatcaatggaccaactcgcactaagctggagcctagtgtgtttcatgatgtgttcgaaggcaataaggaaccagcagtcttatcaagtaaagaccctagattggaggtcgactttgagcaagccctattttccaagtatgtgggcaatgttttacatgagcccgatgaatatgtgactcaagctgctctccactatgcgaatcaactcaaacaattggacataaacactagcaagatgagcatggaggaagcgtgctatggcactgagaacctggaagcaatagacctctgtactagtgccggatatccatacagcgcccttggaatcaagaaaaaagacattctcgaccccgtatccagggatgtgtctaagatgaaatattatatggataaatatggtctagatctgccatactccacctatgtgaaggatgagcttaggcctctggataaaattaagaagggaaagtcacgcctgatagaggctagtagcttgaatgactccgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggcactgtgaccggctcggcagtgggttgcaacccagacgtgttttggagcaaactgccgattctactgcctgggtcactctttgcttttgactactcaggatatgatgctagcctcagcccggtgtggttcagggccctagaagttgtgctaagggaaattgggttcacagaggaggccgtgtccctaatagaaggaatcaaccacacccaccacgtgtaccggaacaaaacatactgtgtacttggtgggatgccctcagggtgttctggcacctccatctttaactcaatgatcaacaatatcatcattagaacccttttaatcaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggatgatgtgttggctagttatccttttcctatcgattgccttgagttggccaagactggcaaagagtatggtttaactatgacacctgcagacaaatcaccttgttttaatgaagtgacatgggaaaacgctaccttcctcaagagggggttcttaccagactaccaatttccattcctaattcaccccacgatgcccatgaaagagatccatgagtccattcgatggactaaagacgcgcgcaacacccaagaccacgtgcgctccctgtgtctgttggcatggcataatggtaaggatgaatatgagaaatttgtgagtacaattagatcagttccagttgggaaagcgttggccattcctaattttgaaaatttgagaagaaattggctcgaattatttt--aa-tattacagctg-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tattctt-c---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KR045297.1_Enterovirus_A71_isolate_THA_A641_polyprotein_gene_complete_cds
----------------------------------------------------------------------------------------------------------------------------ccct---t----ccc-c-----aattt-gcaacttagacgc------------aattcacaacacc-gatcaa-tagcaggcatggcgcaccagctatgtcttga-tcaagcacttctg-tttccccggaccgagtatcaataaactgc-tcacgcggttgaaggagaaagcgtccgtcacccggctaactacttcgagaaacc-cagtaacgccattgaaactgcagagtgtttcgctccaca--ctt-tcccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaatcact-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctatcata-----taccta----tttgtt-ggctttgtaccac-----tgacctt--------------aaaatctgtaacc-actctcgactacatattaaccctcaatacaatcaaa-----catgggctcacaggtgtccactcaacgatccggctcccatgaaaactccaattcagctacag-aaggctctaccattaattacaccactattaattattacaaagattcctatgctgcgacagcgggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgttaaggacattttcactgaggtggctgcacctctaaagtctccgtctgctgaagcttgtggttacagcgatcgcgtggcacaactcaccattggaaactccaccattactacacaggaagccgcaaacatcatagtcggctatggtgaatggccctcgtactgctccgatggtgacgctacagcagtggataagccaacgcgcccagatgtttccgtgaacaggttttatacattggacactaaactgtgggaaaagt------------------catccaaggggtggtattggaagtttcctgatgtgttgactgagaccggagtttttggccaaaacgcacagtttcactacttatataggtcagggttttgcatccatgtgcaatgcaacgctagcaagttccaccaaggagcgctgttagtcgctatacttccagagtatgtcatagggacggtggcaggcggcacaggaacgg------aggatagccaccctccttacaaacaaacacaaccaggtgccgacggttttgaattgcagcacccgtatgtgctcgacgctgggatccctatatcacaattgacaatatgcccccatcaatggattaatctgcgaactaataactgtgccacaataatagtgccatatatgaacacactaccttttgactccgccttgaaccattgcaattttgggttgttggtagtacccatcagcccattggattttgaccaaggggcaactccagttatccctattacaatcactttagccccaatgtgttctgagtttgctggtctcaggcaagcagtcactcaaggcttccccactgagccaaagccagggacgaaccaattcttaaccaccgatgatggcgtctcagcacccattctgccaaatttccatcccacaccatgtattcacatacctggtgaagtcagaaacctgctcgagttgtgccaagtggagactattcttgaagttaacaa----------cgtacccaccaatgctactagtctg------atggaaaggctacgattcccggtgtccgcgcaagcgg------ggaaaggtgaattgtgtgctgtgtttagggctgatcctggaagagacggtccatggcagtcaacgatgctgggccagttgtgtggatactacactcagtggtcagggtcattggaggttactttcatgttcaccgggtcctttatggctacgggtaagatgctcatagcttatacacctcctggcggccccttacccaaagatcgagctacagcaatgttgggcacacatgttatctgggactttgggctacaatcatctgtcactcttgtaataccatggatcagtaatacccactacagggcgcatgcccgggatggagtgttcgactactataccacaggactggtcagcatctggtatcaaacaaattacgtagtcccgattggggcacccaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaaactgtgcaaggacactagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagacagtgtgagtagggtgctcacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagccatcgactagacaccggtgaagttccagcgctccaagctgccgagattggggcatcatcaaatactagtgatgagagtatgattgagacacgatgcgtcattaactcacacagtacagcagagactaccttggacagttttttcagcagagcgggcttggtaggagagatagacctccccttagagggcaccac-caatccaaatggttatgccaactgggatatagacataactggttatgcgcaaatgcgcaggaaagtggagctgttcacctatatgcgctttgacgcggaatttacttttgttgcgtgcactcctactggtgaggttgttccacaattactccagtatatgtttgttccccctggtgctcctaaaccagattctagggaatcacttgcttggcagacagccacaaacccttcagtttttgtcaagttaactgatcccccggcacaggtctcagttccgttcatgtcacccgcgagcgcctaccagtggttttacgacgggtaccccacgtttggagagcacaaacaggagaaagatcttgaatatggagcgtgtcctaacaacatgatgggcactttctcggtgcggaccgtggggtcttcaaagtccaagtaccccttggttgtcagaatatatatgagaatgaagcatgtcagggcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccaaattatgccggtaa----ctccattaagccgaccggtactagtcgtaccgctat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcagtccggggccatctacgtgggcaacttcagagtggttaatcgccatctcgctacccataatgactgggcaaaccttgtttgggaagacagttcccgcgacctattagtgtcgtccactaccgcccagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactccaagagaaagcactatccagtcagcttttctaaacccagcctcatatatgtggaagctagcgagtattaccctgctagataccaatcacacctgatgctcgcagcgggccactccgagcccggtgactgcgggggcatcttaaggtgccaacatggtgtagtcggtatagtgtccacgggcggcaacggactcgttggttttgctgatgtgagggatctcttatggttagatgaagaagccatggagcaaggtgtctccgactacattaag-gggcttggtgacgcgtttgggacgggcttcactgatgctgtatccagggaagttgaagcccttagaaaccaccttataggatctgatggagcagttgagaaaattctaaagaatcttattaagttgatttcagcattagtaattgtgattaggagcgactatgatatggtcaccctcacagctactttagccctgattggttgccatggaagtccttgggcttggatcaaagccaagacagcatccattttaggcatccccattgcccagaagcagagtgcttcttggctaaagaagttcaatgatatggcgagtgccgccaagggcttagagtggatatccagcaaaattagcaaattcattgactggctcagagagaagattgttccagcagctagagagaaagcagaattcttaactaatttgaagcagttacca-ctgctagagaaccagatcacaaatttagaacagtccgctgcctcacaagaagaccttgaagccatgtttgggaatgtgtcatacctcgctca---------tttctgccgaaagttccaaccattatacgccacagaagctaagcgggtctatgtcctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcactgggaagtcccttgcgaccggtatcattgctcgggccatagcagataagtatcactctagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtaatggacgatctgtgtcagaatcccgatggcaaggatatgtcactattttgccagatggtatccaccgtggatttcatcccaccaatggcttctcttgaggaaaagggagtttcttttacatctaaatttgttattgcatccaccaactccagcaacattatagtgcctacagtgtctgactctgatgccattcgacgcaggtttttcatggattgcgacattgaagtgacggactcatacaaaacagacttgggtagattagatgctggacgggctgctaagttatgttctgaaaataacactgcaaacttcaaacgatgcagccctctagtgtgtgggaaagctattcaacttagagacaggaagtccaaggtcaggtacagcgtggacacagtggtctctgaacttattagggaatacaatagcagatctgctattggcaacacaatcgaagcactattccaaggcccgcccaagtttagaccaattagaatt---agtcttgaagagaagccagccccagacgctattagcgatctcctcgccagtgtagacagcgaggaagtgcgccaatactgt-agggagcaaggttggatcatccctgaaactcccactaatgttgaaaggcaccttaacagagcagtactagttatgcaatccatcgctactgtggtggcagttgtctcactggtgtatgtcatttacaagctctttgcggggtttcaaggcgcgtattctggagctcccaagcaaatgctcaagaaacccgtcctccgtacagcaacagtgcagggtccaagtcttgactttgctctatccctgctgagaagaaatatcaggcaaatccaaacagatcaggggcattttaccatgttgggtgtcagggatcacttggctgtcctcccacgacacgcacaacccgggaagaccatttgggtggagcataagcttgtgaacgtcctcgacgcaatcgaactagtggacgaacagggcgttaatttggaactcacattggtgacactggacactaatgaaaaatttagagacattaccaagttcattccagaaaccattagtggcgctagtgatgcaactttagtgatcaatacagaacacatgccatcaatgtttgtcccagtgggggacgtcgtgcagtatgggttcttgaaccttagtggaaagccaacgcacagaaccatgatgtacaatttccccacaagagcagggcaatgtggaggtgtagtcacatcagtcggtaagattgttggcattcatattggcggtaacgggcgccaagggttctgtgctggtctgaagaggagttacttcgcaagtgcgcagggtgagatccaatgggtgaagcctaacaaagaaactggtagattgaacatcaatggaccaactcgcactaagctggagcctagtgtgtttcatgatgtgtttgaaggcaataaggaaccagcagtcttatcaagtaaagaccctagattggaggtcgactttgagcaagccctattttccaagtatgtgggcaatgttttacatgagcccgatgaatatgtgactcaagctgctctccactatgcgaatcaactcaaacaattggacataaacactagtaagatgagcatggaggaagcgtgctatggtactgagaacttggaagcaatagacctctgtactagtgccggatatccatacagcgcccttggaattaagaaaaaagacattctcgaccccgtatccagggatgtgtctaagatgaaattttatatggatagatatggtctggatctgccatactccacctatgtgaaggatgagcttaggcctctggataaaattaagaagggaaagtcacgcctgatagaggctagtagcttgaatgactctgtctacctcagaatgacttttgggcacctttacgaggtatttcatgctaaccctggcactgtgaccggctcggcagtgggttgtaacccagacgtgttttggagcaagctaccgattctactgcctgggtcactctttgcttttgactactcaggatatgatgctagcctcagcccggtgtggtttagggccctagaagttgtgctaagggaaattgggttttcagaggaggccgtgtccctaatagaaggaatcaaccacacccaccacgtgtaccggaacaaaacatactgtgtacttggtgggatgccctcaggatgttctggtacctccatctttaactcaatgatcaacaatatcatcattagaaccctcttaatcaaaacctttaagggaatagacctggatgagttgaacatggtggcctatggggatgatgtgttggctagttacccttttcctatcgattgccttgagttggccaagactggcaaagagtatggtttaactatgacacctgcagataaatcaccctgttttaatgaagtgacatgggaaaacgctaccttcctcaagagggggttcttaccagactaccaatttccattcttaattcaccccacgatgcccatgagagagatccatgagtccattcgatggactaaagacgcgcgcaacacccaagaccacgtgcgctctctgtgtctgttggcatggcataatggtaaggatgaatatgagaaatttgtgagtacaattagatcagttccagttgggaaagcgttggctattcctaattttgaaaatctgagaagaaattggctcgaattatttt--aa-tattacagctt-------------------------gaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgtcaat-g-acta--------gtgggggtaaatttgt-ta-taaca-a-a---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB747373.1_Enterovirus_A71_genomic_RNA_complete_genome_strain:_Nagoya
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcactctgattttacgaaatccttgtgtgcct-g-ttttata---t--ccct---g----ccc-t-----aattc-gtaacatagaagt------------aatgcgcaccact-gatcaa-tagcaggcgtaacgcgccagttacgtctcga-tcaagcacatctg-tctccccggaccgagtatcaatagactgc-ttacgcggttgaaggagaaagcgttcgttatccggctaactacttcgagaagcc-cagtagcaccatggaagctgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgca-acccccacaggtgactgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgcg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attctcatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctgttata-----tacctg----tttgtt-ggttttgtaccac-----taacttt--------------aaaatctatagct-acccttaattttatactgaccctcaacacagttaaa-----catgggttcacaagtgtctactcagcggtccggctcccacgagaattccaattcagctacag-aaggttccaccattaattacactactatcaattattacaaggactcttatgctgccacagcaggcaagcagagcctcaaacaagaccctgacaagtttgccaatcctgtcaaggacattttyacygaaatggcggcgccactgaagtctccatctgctgaggcgtgtggttatagcgatcgtgtggcacaactcaccattggaaactccaccatcaccacacaggaagcagcaaatatcatagttggttatggtgagtggccctcgtactgctctgacgatgatgctacagcggtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattagacactaaactgtgggaaaaat------------------catccaaggggtggtactggaaattccctgatgtattgactgaaaccggggtctttggtcaaaatgcacagttccattacttatataggtcaggattttgtattcatgtgcaatgcaacgctagtaagttccatcaaggggcactgctagtcgccatccttccagagtatgttattgggacagtggcaggcggtacaggaacag------aggatagtcaccctccttacatacaaacacaacctggtgctgacggttttgagctgcaacacccgtacgtgcttgatgctgggatccctatatcacaattgacagtgtgccctcaccagtggattaatctacgaaccaataattgcgccacgataatagtgccatatatgaacacactgccttttgactctgccttgaaccattgcaactttgggttgttagttgtgcccattagcccattagattttgaccaaggggcaaccccggttatccctatcactatyactctagctccaatgtgctctgagtttgcaggtcttaggcaagcagtcactcaaggctttcctacagagctgaaaccagggacaaaccaatttttgaccaccgacgacggcgtctcagcgcccattttaccgaacttccaccccaccccgtgtattcacatacccggcgaggttagaaacttacttgaattgtgccaagtggagaccatccttgaagtcaacaa----------cgtgcctaccaatgctaccagtttg------atggaaaggctacgattcccggtgtctgctcaagcgg------ggaagggtgaattgtgcgccgtgttcagagccgatccaggaagggacggcccgtggsagtcaaccatgctgggccagctgtgtggatattacactcagtggtcaggatcactggaggtcacttttatgttcaccggatcattcatggccacgggtaaaatgcttatagcttatacaccccctgggggccctctacccaaggatcgggccacagcgatgctgggcacacacgtcatctgggacttcgggctacaatcgtctgtcacccttgtgataccatggattagtaacactcactacagagcgcatgcccgagatggggtgttcgattactataccacaggactggttagtatctggtatcagacaaactacgtggttccaattggggcgcctaacacagcttacataatagcactggcggcagcccaaaagaatttcaccatgaagctgtgcaaagacaccagtsacatattacagacagcttccattcagggggataga--------gtggcagatgtgatcg---agagttctat--------------------------aggggacagtatgagtagagcacttactcaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactggatactggcgaagttccagcgctccaagctgctgaaattggggcatcgtcaaacactagtgacgagagtatgattgaaacacgatgcgttcttaactcacatagcacagcagaaaccactttggacagcttctttagtagagcaggcttggtaggggagatagacctccctcttgagggtactac-taacccaaatggttatgctaactgggatatagacataactggctacgcacagatgcgcaggaaagtggagctattcacttatatgcgctttgatgcagaattcacttttgttgcgtgcacccctactggcgaggttgttccacaattactccagtatatgtttgtcccccctggcgctcccaagccagaatctagggaatcactcgcttggcagactgctacaaacccctcagtttttgtcaagttaactgatcccccagcacaggtctcagttccatttatgtcacccgcgagtgcttaccagtggttttacgacgggtaccccacatttggagaacataaacaggagaaagatcttgaatatggagcatgtcctaataatatgatgggcactttctcggtgcgaactgtggggtcatcgaaatccaagtatcccttagttatcagaatatatatgagaatgaagcatgtcagggcatggatacctcgtccaatgcgcaaccaaaattacttgttcaaagctaatccaaactatgctggcaa----ctccattaaaccaaccggtaccagtcgcaatgccat---cactac---------------------------------------tcttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggtaatttcagggtggtcaatcgtcatctcgctactcacaatgactgggcgaatctcgtctgggaagacagctctcgcgatctactagtgtcgtctaccaccgctcagggctgtgacacaatcgcgcgttgcaattgtcaaacaggagtgtactattgcaactcaaagaggaagcacyacccagtcagcttttcaaaacccagcctcatatatgtggaagctagtgagtattwccctgctagataccaatcacacttgatgcttgctgtgggtcactctgagcctggtgattgtgggggcatcttgaggtgccagcacggtgtagttggtattgtgtccacgggtggcaacgggctcgtcggttttgctgatgtgagagatctcctgtggttagatgaagaagccatggagcaaggtgtgtccgactacatcaag-ggactcggtgacgcattcggaacaggcttcactgatgctgtttccagagaagttgaggctctcaggaatcacctcattgggtccgatggagcggttgagaagatcctaaagaaccttatcaagctgatatcagcgctagtgattgtgatcaggagcgattatgacatggtcaccctcacagcaactttagctctgatcggctgtcatggaagcccttgggcttggattaaagcyaaaacagcatccattttaggtatccccatcgcccagaagcagagtgcatcttggctaaagaaatttaatgacatggccaatgccgccaaggggttagagtggatatccaacaaaattagcaagtttattgactggctcagggagaagattgtgccagcagccaaggaaaaagcggagtttttaaataatttgaagcaattgcca-ctgttagagaatcagatcacaaatttagaacaatccgctgcctcacaagaggatcttgaagcaatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaaatttcaaccattgtacgctacagaggctaagcgagtctatgttctagagaagaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggctcaccaggcactggaaaatcccttgcaacgggtattattgcccgggctatagcagacaagtatcactccagtgtgtactcacttccaccagacccagatcattttgacgggtacaaacagcaggtggtcacagtaatggatgacctgtgtcaaaatcctgatggcaaggatatgtcattgttttgtcaaatggtgtccactgtggatttcatcccaccaatggcttctcttgaagagaagggagtttctttcacatctaaatttgtcatcgcatctaccaatgctagcaacattatagtgccaacagtgtctgactctgacgccatccgtcgcaggttttacatggattgtgatattgaagtgacagactcttacaaaacagacttgggtaggttagacgctggacgggctgctaaattgtgctctgaaaacaatactgcaaatttcaaacgctgcagcccactagtgtgtgggaaagctatccaacttagagacagaaagtctaaggtcaggtacagcgtggacacggtggtctccgaacttgttagagagtacaacagcagatccgctattggtaacacaattgaagcactgttccaaggcccacccaagttcagaccaattagaatc---agtcttgaggagaagccagccccggacgctattagcgatctcctcgctagtgtagacagcgaggaagtgcgtcaatactgc-agggaacaaggctggatcatccctgaaactcccaccaatgttgaacgacacctcaatagagcagtgctagtcatgcaatccatcgctactgtggtggcagttgtctcactggtgtacgtcatttataagctctttgcagggttccaaggtgcgtattctggtgcccctaagcaagtgctcaagaaacctgttctccgcacggcaacagtgcagggtccaagtcttgactttgctctctctttgctgagaaggaatatcaggcaagttcaaacagaccaagggcacttcactatgctaggtgtcagagaccgcttggccgttctcccacggcactcgcaacctgggaagaccatttgggtggagcacaaacttgtgagcattctcgatgcagtcgagctagtggatgagcaaggtgttaatttagaactcacattggtgacactagacactaatgagaaatttagagatatcaccaagttcattccagaaaccattagcggcgctagtgatgcaactttagtgatcaacacagaacacatgccatcaatgtttgtcccagtgggggatgtcgtacagtatggattcttgaaccttagtggtaaaccaacccataggaccatgatgtacaactttcctacaaaagctggacagtgtggaggcgtagtcacatcggtcggcaagatcattggcatccacattggcggtaatgggcgtcaaggattctgtgctggtttgaagaggagttacttcgcaagtgaacaaggtgagatccaatgggtgaaatccaacaaggaaactggtagactgaacatcaatggaccaacacgcactaagctggaacccagtgtattccatgacgtgtttgagggcaacaaggaaccagcagtcctaacaaacaaagatcctagattggaggttgattttgaacaagccctattctccaagtatgtgggcaatgtattgcatgaacctgatgagtacgtacatcaagctgctctccactatgcaaaccaacttaagcaattggatataaacactaataaaatgagcatggaggaggcatgttatggtacggaaaacctggaagcgatagacctccacaccagtgcagggtacccatatagcgctctgggaatcaagaaaagagacatcctcgacccattgaccagggatgtctctaagatgaaattatatatggacaaatatgggttggatctgccatactccacttatgttaaagatgaactcagatctctagataagatcaagaaagggaagtcacgcctgatagaggctagtagcttgaatgattctgtttatctcagaatgacctttggacatctttacgaagtgtttcatgccaatcccggcactgtgactggttcagcagttggttgtaacccagacgtgttttggagcaagctaccaattttgttgcctggctcgctttttgcttttgactattcagggtatgatgctagcctcagtccggtgtggtttagagctttggagacagtgctacgggagattggttattcggaagaagcagtgtcactaattgagggaataaaccacacccaccacgtgtaccgaaacaaaacatactgtgttctcggtggaatgccctcggggtgttccggcacttctatcttcaattcaatgattaacaacattatcatcagaacccttttgattagaaccttcaaggggatagacctggatgagctgaacatggtggcttatggggatgatgtgctagctagttatcctttccctattgactgccttgaactagctaggactggtaaggagtatggattgaccatgacgcctgcagataaatcgccctgctttaatgaggtaacatgggaaaatgctacctttttgaagagaggatttttgccagatcaccagttcccattcttaattcaccctacgatgcccatgaaagaaatccatgaatctatccgatggacaaaagatgcacgcaacactcaagaccacgtgcgctccctgtgcctactggcttggcacaatggcaaggatgaatacgagaaatttgtgagtacaattagatcagttccagttggaaaggcattggcgattccaaactttgagaatttgaggagaaattggctcgaattgtttt--aa-atttgcagctt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----cgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575915.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_9443
---------------------------------------------------------------------------------ctga-tttacgaaatccttgtgcgcct-g-ttttata---t--ccct---t----ccc-t-----aattc-gaaacatagaagt------------aatgcgcaccact-gatcaa-tagcaggcgtaacgcgccagttacgtctcga-tcaagcacatctg-tctccccggaccgagtatcaatagactgc-ttacgcggttgaaggagaaagcgttcgttatccggctaactacttcgagaagcc-cagtagcaccatggaagctgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgca-acccccacaggtgactgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtagacatggtgcg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttatattggctgcttatggtgacaactaca-------gaattgttaccatatagctattggattggccatccgg--tgtgtaatagagctgttata-----tacctg----tttgtt-ggttttgtaccac-----taacttt--------------aaaatctataact-acccttaattttatattgaccctcaacgcagttaaa-----catgggttcacaagtgtctacccagcggtccggctcccacgaaaattccaattcagctacag-aaggctccaccattaattacactactatcaactattacaaggactcttatgctgctacagcaggcaagcagagcctcaaacaagaccctgacaagtttgctaaccctgtcaaggacgttttcactgaaatggcggcgccactgaagtctccatccgctgaggcgtgtggttatagcgatcgtgtggcacaactcaccattggaaactccaccatcaccacacaggaagcagcaaatatcatagttggctatggtgagtggccctcatactgctctgacgatgatgctacagcggtggataaaccaacgcgtccggatgtttcagtgaataggttttacacattagacactaaactgtgggaaaaat------------------catccaaggggtggtactggaaattccctgatgtattgactgaaaccggggtctttggccaaaatgcacagttccattacttatataggtcagggttttgtattcatgtgcaatgcaatgctagtaagttccatcaaggggcactgctagtcgctatccttccagagtatgttattgggacagtggcaggcggtacaggaacag------aagatagtcaccctccttacaaacaaacacaacctggcgctgacggttttgagctgcaacacccgtacgtgcttgatgctgggatccctatatcacaattgacagtgtgccctcaccagtggattaatctacgaaccaataactgcgccacgataatagtgccatatatgaacacactgccttttgactctgccttgaaccattgcaactttgggttgttagttgtgcccattagcccattagattttgaccaaggggcaaccccggttatccctattactatcactctagctccaatgtgctctgagtttgcaggtcttaggcaagcagtcactcaaggctttcctacagagctgaaaccagggacaaaccaatttttgaccaccgacgacggcgtctcagcgcccattttaccgaacttccaccccaccccgtgtattcacatacccggcgaggttaggaacttacttgagttgtgccaagtggagaccatccttgaagttaacaa----------cgtgcctaccaatgctaccagtttg------atggaaaggctacgattcccggtgtctgctcaagcgg------ggaagggtgaattgtgcgccgtgttcagagccgatcccggaagggacggcccgtggcagtcaaccatgctgggccagctgtgtggatattacacccagtggtcaggatcactggaggtcacttttatgttcactggatctttcatggccacgggtaaaatgcttatagcttatacaccccctgggggccccctacccaaggatcgggccacagcgatgctgggcacacacgtcatctgggattttgggctacaatcgtctgtcacccttgtgataccatggatcagtaacactcactacagagcgcatgcccgagatggggtgttcgattactataccacaggactggttagtatttggtatcagacaaactacgtggttccaattggggcgcctaacacagcttacataatagcactagcggcagcccaaaagaatttcaccatgaagctgtgcaaggacaccagtcacatattacagacagcttccattcagggggataga--------gtggcagatgtgatcg---agagttctat--------------------------aggggacagtatgagtagagcacttacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactggatactggtgaagttccagcgctccaagctgctgaaattggggcatcgtcaaacactagtgatgagagtatgattgaaacacgatgcgttcttaactcacatagcacagcagaaaccactttggacagcttcttcagtagagcaggcttggtaggggagatagacctccctcttgagggtactac-taacccaaatggttatgctaactgggatatagacataactggctacgcacagatgcgcaggaaagtggagctattcacttacatgcgctttgatgcagaattcacttttgttgcgtgcacccctactggtgaggttgttccacaattactccagtatatgtttgttccccctggcgctcccaagccagaatctagggaatcactcgcttggcagactgctacaaacccctcagtttttgtcaagttaactgatcccccagcacaggtctcagttccatttatgtcacccgcgagtgcttaccagtggttttacgacgggtaccccacgtttggagagcataaacaggagaaagatcttgaatatggagcatgtcctaataatatgatgggcactttctcggtgcgaactgtggggtcatcgaaatccaagtaccccttagttatcaggatatatatgagaatgaagcatgtcagggcatggatacctcgtccaatgcgcaaccaaaattacttgttcaaagccaatccaaactatgctggtaa----ctccattaaaccaaccggcaccagtcgcaatgccat---cactac---------------------------------------tcttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggcaacttcagggtggtcaatcgtcatctcgctactcacaatgactgggcgaatctcgtttgggaagacagctctcgcgatctactagtgtcgtctactaccgcccagggctgtgacacaatcgcacgttgcgattgtcaaacaggagtgtactattgcaactcaaagaggaagcactatccagtcagcttttcaaaacccagcctcatatatgtggaagctactgagtattaccctgctagataccaatcacacttgatgcttgctgtgggtcactctgagcctggtgattgcgggggcatcttaaggtgccagcacggtgtagttggtatagtgtccacgggtggcaacgggctcgtcggttttgctgatgtaagagatctcctgtggttagatgaagaagccatggagcaaggtgtgtccgactacatcaag-gggctcggtgacgcattcggaacaggcttcactgatgctgtttccagagaagttgaggccctcaggaaccacctcattgggtccgatggagcggttgagaagattctaaagaaccttatcaagctgatttcagcgctagtgattgtgatcaggagcgattatgatatggttaccctcacagcaactttagccctgatcggctgtcatggaagcccttgggcttggattaaagccaaaacagcatccattttaggtatccccatcgcccagaagcagagtgcatcttggctaaagaaatttaatgacatggccaatgccgccaaggggttagagtggatatccaacaaaattagcaagtttattgactggctcagggagaagattgtaccagcggctaaggagaaagcggagtttttaaacaatttgaagcaattgcca-ctgttagagaatcagatcacaaatttagaacaatccgctgcctcacaagaggatcttgaagcaatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaaatttcaaccattgtacgctacagaggctaagcgagtctatgttctagagaagaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggttcaccaggcactggaaaatcccttgcaacgggtattattgcccgggctatagcagacaagtatcactccagtgtgtactcacttccaccagacccagatcattttgacgggtacaaacagcaggtggtcacagtaatggatgacctgtgtcaaaatcctgatggtaaggatatgtcattgttttgtcaaatggtgtccactgtggatttcatcccaccaatggcttctcttgaagagaagggggtttctttcacatctaaatttgtcatcgcatctaccaatgctagcaacattatagtaccaacagtgtctgactctgacgccatccgtcgcaggttttacatggattgtgatattgaagtgacagactcatacaaaacagatttgggtaggttagacgctggacgggctgctaaattgtgctctgaaaacaatactgcaaatttcaaacgctgcagcccactagtgtgtgggaaagccatccaacttagagacagaaagtctaaggtcaggtacagcgtggacacagtggtctccgaacttattagagagtacaacagcagatccgctattggtaacacaattgaagcactgttccaaggcccacccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagacgctattagcgatctcctcgctagtgtagacagcgaggaagtgcgtcaatactgc-agggaacaaggctggatcatccctgaaacccctaccaatgttgaacgacacctcaatagagcggtgctagtcatgcaatccatcgccactgtggtggcagttgtctcattggtgtacgtcatttataagctctttgcagggttccaaggtgcgtattctggtgcccccaagcaagtgctcaagaaacctgttctccgcacggcaacagtgcagggtccaagtcttgactttgctctctccttgctgagaaggaatatcaggcaggttcaaacagaccaagggcatttcactatgctaggtgtcagagaccgcttggccgttctcccacggcactcgcaacctgggaagaccatttgggtggagcacaaactcgtgaacattctcgatgcagtcgagctagtggatgagcagggtgttaatttagaactcacattggtgacactagacactaatgagaaatttagagatatcaccaaattcattccagagaccattagcggcgctagtgatgcaactttagtgatcaacacagaacacatgccatcaatgtttgtcccagtgggggatgtcgtgcagtatggattcttgaaccttagtggtaaaccaacccacaggaccatgatgtacaattttcctacaaaagctggacagtgcggaggcgtagtcacatcagtcggtaagatcattggcatccacattggtggtaatgggcgtcaagggttctgtgctggtttgaagaggagttacttcgcaagtgaacaaggcgagatccaatgggtgaaacctaacaaggaaactggtagactgaacatcaatggaccaacacgcactaagctggaacccagtgtgtttcatgacgtgtttgagggcaacaaggaaccagcagtcctaacaaacaaagatcctagattggaggttgattttgaacaagccctattctccaaatatgtgggcaatgtattgcatgaacctgatgagtacgtacatcaagctgctctccactatgcaaaccaacttaagcaattggatataaacactaataaaatgagcatggaggaggcatgttatggtacggaaaacctggaagcgatagacctccacaccagtgcagggtacccatatagcgctctgggaatcaagaaaagagacatcctcgacccattgaccagggatgtctctaagatgaaattatatatggacaaatatgggttggatctgccgtactccacttatgttaaagatgaactcagatctctagacaagatcaagaaagggaagtcacgcctgatagaggctagtagcttgaatgattctgtctatctcagaatgacctttggacatctttacgaagtgttccatgccaatcccggcactgtgactggttcagcagttggttgtaacccagacgtgttttggagcaagctaccaattttgttgcctggctcgctttttgcttttgactattcagggtatgatgctagtctcagcccggtgtggtttagagctttggagacagtgctacgggagattggttattcggaagaagcagtgtcactaattgaggggataaaccacacccaccacgtgtaccgaaacaaaacatactgtgttctcggtggaatgccctcggggtgttccggcacttctatcttcaattcaatgattaacaacattatcatcagaacccttttgatcagaaccttcaaggggatagatctggatgagctgaacatggtggcttatggggatgatgtactagctagttatcctttccctattgactgcctcgaactagctaggactggtaaggagtatggattgaccatgacgcctgcagataaatcgccctgctttaatgaagtaacatgggaaaatgctacctttttgaagagaggatttttgccagatcaccagttcccattcttaattcaccctacgatgcccatgaaagaaatccatgaatctatccgatggacaaaagatgcacgcaacactcaagatcacgtgcgctccctgtgcctactggcttggcacaatggcaaggatgaatacgagaagtttgtgagtacaattagatcagttccagttggaaaggcattggcgattccgaactttgagaatttgaggagaaattggctcgaactgtttt--aa-atttgcagctt-------------------------aagg---------------ctgaacc-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575916.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_16173
-------------------------------------------------------------------------------------------gaaatccttgtgcgcct-g-ttttata---t--ccct---t----ccc-c-----aatcc-gaaacatagaagt------------aatgcgcaccact-gatcaa-tagcaggcgtaacgcgccagttacgtcacga-tcaagcacatctg-tctccccggaccgagtatcaatagactgc-ttacgcggttgaaggagaaagcgttcgttatccggctaactacttcgagaagcc-cagtagcaccatggaagctgcggggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgca-acccccacaggtgactgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgcg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctgttata-----tacctg----tttgtt-ggttttgtaccac-----taacttt--------------aaaatctataact-acccttaattttatattgaccctcaacacagttaaa-----catgggttcacaagtgtccactcagcggtccggctctcacgagaattccaactcagctacag-aaggctccaccattaattacactactatcaactattacaaggactcttatgctgccacagcaggcaaacagagcctcaaacaagaccccgacaagtttgctaatcctgtcaaggacattttcactgaaatggcggcgccactgaagtctccatctgctgaggcgtgtggttatagcgatcgtgtggcacaactcaccattggaaactccaccatcaccacacaggaagcagcaaatatcatagttggttatggtgagtggccctcatactgctctgacgatgatgctacagcggtggataaaccaacgcgcccggatgtctcagtgaataggttttacacattagacactaaactgtgggaaaaat------------------catccaaggggtggtactggaaattccctgatgtattgactgaaaccggggtctttggtcaaaatgcacagttccattacttatataggtcagggttttgcatccatgtgcaatgcaacgctagtaagttccatcaaggggcactgctagtcgctatccttccagagtatgttattgggacagtggcaggtggtacaggaacag------aggatagtcaccctccttacaaacaaacacaacctggtgctgacggttttgagctgcaacacccgtacgtgcttgatgctgggatccctatatcacaactgacagtgtgccctcaccagtggattaatctacgaaccaataattgtgccacgataatagtgccatatatgaacacactgccttttgactctgccttgaaccattgcaactttgggttgctagttgtgcccattagcccattagattttgaccaaggggcaaccccggttattcccatcactatcactctagctccaatgtgctctgagtttgcaggtcttaggcaagcagtcactcaaggctttcctacagagctgaagccagggacaaaccaatttctgaccaccgacgacggcgtctcagcgcccattttaccaaacttccaccccaccccgtgtattcacatacccggtgaggttagaaacttacttgaattgtgccaagtggaaaccatccttgaagttaacaa----------cgtgcctaccaatgctaccagtttg------atggaaaggctacggttcccggtatctgctcaagcgg------ggaagggtgaactgtgcgctgtgttcagagccgatccaggaagggacggcccgtggcagtcaaccatgctgggccagctgtgtggatattacactcagtggtcaggatcactggaggtcacttttatgttcaccggatcattcatggccacgggtaaaatgcttatagcttatacaccccctgggggccccctacccaaggatcgggccacagcgatgctgggcacacacgtcatctgggacttcgggctacaatcgtctgtcacccttgtgataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgtttgattactataccacaggactggttagcatctggtaccagacaaactacgtggttccaattggggcgcctaacacagcttacataatagcactggcggcagcccaaaagaatttcaccatgaagctgtgcaaagacaccagtcacatattacagacagcttccattcagggggataga--------gtggcagatgtgatcg---agagttctat--------------------------aggggacagtatgagtagagcacttactcaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactggatactggcgaagttccagcgctccaagctgctgaaattggggcatcgtcaaacactagtgacgagagtatgattgaaacgcgatgcgttcttaactcacatagcacagcagaaaccactttggacagctttttcagtagagcaggcttggtaggggagatagacctccctcttgagggcactac-taacccaaatggttatgctaactgggatatagacataactggctacgcacagatgcgcaggaaagtggagctattcacttatatgcgctttgatgcagaattcacttttgttgcgtgcacccctactggtcaggttgttccacaattactccagtatatgtttgttccccctggcgctcccaaaccagaatctagggaatcactcgcttggcagactgctacaaacccctcagtttttgtcaagttaactgaccccccagcacaggtctcagttccatttatgtcacccgcgagtgcttaccagtggttttacgacgggtaccccacgtttggagaacataaacaggagaaagatcttgaatatggagcatgccctaataatatgatgggtactttctcggtgcgaactgtggggtcatcgaaatccaagtatcccttagttatcagaatatatatgaggatgaagcatgtcagggcatggatacctcgtccaatgcgcaaccagaattacttgttcaaagccaatccaaactatgctggcga----ctccattaaaccaaccggtaccagtcgcaatgccat---cactac---------------------------------------tcttgga------------------------------------------aagtttggtcagcaatctggggccatctatgtgggtaacttcagggtggtcaatcgtcatctcgctactcacaatgactgggcgaatctcgtctgggaagacagctcccgcgatctactagtgtcgtccaccaccgctcagggctgtgacacaatcgcacgttgcaattgtcaaacaggagtgtactattgcaactcaaagaggaagcactatccagtcagcttttcaaaacccagcctcatatatgtggaagctagtgagtattaccctgctagatatcaatcacacttgatgcttgctgtgggtcactctgagcctggtgattgtgggggcatcttaaggtgccagcacggtgtagttggtatagtgtccacgggtggcaacgggctcgtcggttttgctgacgtgagagacctcctgtggttagatgaggaagccatggagcaaggtgtgtccgactacatcaag-ggactcggtgacgcattcggaacaggcttcactgatgctgtttccagagaagttgaggctctcaggaaccacctcattgggtccgatggagcggttgagaagatcctgaagaaccttatcaagctgatttcagcgctagtgattgtgatcaggagcgattatgatatggtcaccctcacagcaactttagctctgatcggctgtcatggaagcccttgggcttggattaaagccaaaactgcatccattttaggtatccccatcgcccagaagcagagtgcatcttggctaaagaaatttaatgacatggccaatgccgccaaggggttagagtggatatccaacaaaattagcaagtttattgactggctcagggagaagattgtgccagcagctaaggaaaaagcggagtttttaaataatttgaagcaattgcca-ctattagagaatcagattacaaatttagagcaatccgctgcctcacaggaggatcttgaagcaatgtttgggaatgtgtcatacctcgccca---------tttctgtcgaaaatttcaaccattgtacgctacagaggctaagcgagtctatgttctagagaagaggatgaataactatatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggctcaccaggcactggaaaatcccttgcaacgggtattattgctcgggctatagcagacaagtatcactccagtgtgtactcacttccaccagacccagatcatttcgacgggtacaaacagcaggtggtcacagtaatggatgacctgtgtcaaaatcctgatggcaaggatatgtcattgttttgtcaaatggtgtccactgtggatttcatcccaccaatggcttctcttgaagagaagggagtttctttcacatctaaatttgtcatcgcatctaccaatgctagcaacattatagtgccaacagtgtctgactctgacgccatccgtcgtaggttttacatggattgtgatattgaagtgacagactcctacaaaacagatttgggtaggttagacgctggacgggctgctaaattgtgctctgaaaacaatactgcaaatttcaaacgctgcagcccactagtgtgtgggaaagctatccaacttagagacagaaagtctaaggtcaggtacagcgtggacacggtggtctctgaacttgttagagagtacaacagcaggtccgctatcggtaacacaattgaagcactgttccaaggcccacccaagttcagaccaattagaatc---aatcttgaggagaagccagccccagacgctattagcgatctcctcgctagtgtagacagcgaggaagtgcgtcaatactgc-agagaacaaggctggatcatccctgaaactcccaccaatgttgaacgacacctcaatagagcagtgctagtcatgcaatccatcgccactgtggtggcagttgtctcactggtgtacgtcatttataagctctttgcagggttccaaggtgcgtattctggtgcccccaagcaagtgctcaagaaacctgttctccgcacggcaacagtgcagggtccaagtcttgactttgccctctctttgctgagaaggaatatcaggcaagttcaaacagaccaagggcatttcactatgctaggtgtcagagaccgcttggccgttctcccacggcactcgcaacctgggaagaccatttgggtggagcacaaacttgtgaacattcttgatgcagtcgagctagtggatgagcagggtgttaatttagaactcacattggtgacactggacactaatgagaaatttagagatatcaccaagttcattccagaaaccattagcggcgctagtgatgcaactttagtgattaacacagaacacatgccatcaatgtttgttccagtgggggatgtcgtacagtatggattcttgaaccttagtggtaaaccaacccataggaccatgatgtacaactttcctacaaaagctggacagtgcggaggcgtagtcacatcagtcggtaagatcattggcatccacattggcggcaatgggcgtcaaggattctgtgctggcttgaaaaggagttacttcgcaagtgaacaaggtgagatccaatgggtgaaatctaacaaggaaactggtagactgaacatcaatggaccaacacgcactaagctggaacccagtgtgtttcatgacgtgtttgagggcaacaaggaaccagcagtcctgacaaacaaagatcctagattggaggttgactttgaacaagccctattctccaagtatgtgggcaatgtattgcatgaacctgatgagtacgtacatcaagctgctctccactatgcaaatcaacttaagcaattggatataaacactaataaaatgagcatggaggaggcatgttatggtacggaaaacctggaagcgatagacctccacaccagtgcagggtacccatatagcgctctgggaatcaagaaaagagacatcctcgacccattgaccagggacgtctctaagatgaaattttacatggataaatatgggttggatctgccatactccacttatgttaaagatgaacttaggtctctagataagatcaagaaggggaagtcacgcctgatagaggctagtagcttgaatgattctgtttatctcagaatgacctttggacatctttacgaagtgtttcatgccaatcccggcactgtgactggttcagcagttggttgcaacccagacgtgttttggagcaagctgccaattttgttgcctggctcgctttttgcttttgactattcagggtatgatgctagtctcagtccggtgtggtttagagctttggagacagtgctacgggagattggttattcggaagaagcagtgtcattaattgaggggataaaccacacccaccacgtgtaccgaaacaaaacatactgtgttctcggtggaatgccctcggggtgttccggcacttctatcttcaattcaatgattaacaacattatcatcagaacccttttgatcagaaccttcaaggggatagatttggatgaactaaacatggtggcttatggggatgatgtgctagctagttatcctttccctattgactgccttgaactagctaggactggtaaggagtatggattgaccatgacgcctgcagataaatcgccctgctttaatgaagtaacatgggaaaatgctaccttcttgaagagagggtttttgccagatcaccagttcccattcttaattcaccctacaatgcccatgaaagaaatccatgaatctatccgatggacaaaagatgcacgcaacactcaagatcacgtgcgctccctgtgcctactggcttggcacaatggcaaggatgaatacgagaaattcgtgagcacaattagatcagttccagttggaaaggcattggcgattccaaactttgagaatttgaggagaaattggctcgaactgtttt--aa-atttgcagctt-------------------------aaag---------------ctgaaccc-caccagaa----gtct-gt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-ta----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ189392.1_Human_enterovirus_71_isolate_HUN/1978_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcactctgattttacgaaatccttgtgtgcct-g-ttttata---t--ccct---t----ccc-c-----aacct-gaaacatagaagt------------aatgcgcaccact-gatcaa-tagcaggcgtaacgcgccagttacgtcacga-tcaagcacatctg-tctccccggaccgagtatcaatagactgc-ttacgcggttgaaggagaaagcgttcgttatccggctaactacttcgagaagcc-cagtagcaccatggaagctgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacaggtgactgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgcg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gatgg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctgttata-----tacctg----tttgtt-ggttttgtaccac-----tgacttt--------------aaaatctataacc-acccttaattttatattgaccctcaacacagtcaaa-----catgggctcacaagtgtccactcagcggtccggctctcacgagaattccaattcagctacgg-aaggctccaccattaattacactactatcaactattacaaggactcttatgctgccacagcaggcaaacagagcctcaaacaagaccccgacaagtttgctaatcctgtcaaggacattttcactgaaatggcggcgccactgaagtctccatctgctgaggcgtgtggttatagcgatcgtgtggcacaactcaccattggaaattccaccatcaccacacaggaagcagcaaatatcatagttggttatggtgagtggccctcatactgctctgacgatgatgctacagcggtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattagacactaaactgtgggaaaaat------------------catccaaggggtggtactggaaattccctgacgtattgactgaaaccggggtctttggtcaaaatgcacagttccattacttaaataggtcaggattttgcattcatgtgcaatgcaacgctagtaagttccatcaaggggcactgctagtcgctatccttccagagtatgttattgggacagtggcaggtggtacaggaacag------aggatagtcaccctccttacatacaaacacaacctggtgctgacggttttgagttgcaacacccgtacgtacttgatgctgggattcctatatcacaactgacagtgtgccctcaccagtggattaatctacgaaccaataattgtgccacgataatagtgccatatatgaacacactgcctttcgactctgccttgaaccattgcaactttgggctgctagttgtgcctattagcccattagattttgaccaaggggcaaccccggttatccccatcactatcactctagctccaatgtgctctgagtttgcaggtcttaggcaagcagtcactcaaggctttcccacagagctgaagccagggacaaaccaatttttgaccactgacgacggcgtctcagcgcccattttaccaaacttccaccccaccccgtgcattcacatacccggtgaggttagaaacttacttgaattgtgccaagtggaaaccatccttgaagttaacaa----------cgtgcctaccaatgctaccagtttg------atggaaaggctacggttcccggtatctgctcaagcgg------ggaagggtgagctgtgcgctgtgttcagagccgatccgggaagggacggcccgtggcagtcaaccatgctgggccagctgtgtggatattacactcagtggtcaggatcactggaggtcacttttatgttcaccggatcattcatggctacgggtaaaatgcttatagcttatacaccccctgggggccccctacccaaggatcgggccacagcgatgctgggcacacacgtcatctgggacttcgggctacaatcgtctgtcacccttgtgataccatggatcagtaacactcactacagagcgcatgcccgagatggagtgtttgattactataccacaggactggttagcatctggtatcagacaaattacgtggttccaattggggcgcctaacacagcttacataatagcactggcggcagcccaaaagaatttcaccatgaagctgtgcaaggacaccagtcacatactacagacagcctccattcagggggataga--------gtggcagatgtgatcg---agagttctat--------------------------aggggacagtatgagtagagcacttacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactggatactggtgaagttccagcgctccaagctgctgaaattggggcatcgtcaaacactagtgacgagagtatgattgaaacacggtgcgttctcaactcacatagcacagcagaaaccactttggacagttttttcagtagagcgggcttggtgggggagatagacctccctcttgagggcactac-taacccaaatggttatgctaactgggatatagacataactggctacgcacagatgcgcaggaaagtggaactattcacttatatgcgctttgatgcagaattcacttttgttgcgtgcacccctactggtgaggttgttccacaattactccagtatatgtttgttccccctggcgctcccaaaccagaatccagggaatcacttgcttggcagactgccacaaacccctcagtttttgtcaagttaactgaccccccagcacaggtctcagtaccatttatgtcacccgcgagtgcttaccagtggttttacgacgggtaccccacgtttggagaacataaacatgagaaagatcttgaatatggagcatgccccaataatatgatgggtactttctcggtgcgaactgtggggtcatcgaaatccaagtatcccttagttatcagaatatatatgaggatgaaacatgtcagggcatggatacctcgtccaatgcgcaaccagaattacttgttcaaagccaatccaaactatgctggcaa----ctccattaaaccaaccggcaccagtcgcaatgccat---cactac---------------------------------------tcttgga------------------------------------------aagtttggtcagcaatctggggccatctatgtgggtaacttcagggtggtcaatcgtcatctcgctactcacaatgactgggcgaatctcgtctgggaagacagctcccgcgatctactagtgtcgtccaccaccgctcagggctgtgacacaatcgcacgttgcaattgtcaaacaggagtgtactattgcaactcaaagaggaagcactatccagtcagcttttcaaaacccagcctcatatatgtagaagctagtgagtattaccctgctagatatcaatcacacttgatgcttgctgtgggtcactccgagcctggtgattgcgggggcatattaaggtgccagcacggtgtagttggtatagtgtccacgggtggcaacgggctcgtcggttttgctgacgtgagagacctcctgtggctagatgaagaagccatggagcaaggtgtgtccgactacatcaag-ggactcggtgacgcatttggaacaggcttcactgacgctgtttccagagaagttgaggctctcaggaaccacctcattgggtccgatggagcggttgataagatcctgaagaaccttatcaagctgatttcagcgttagtgattgtgatcagaagcgattatgatatggtcaccctcacagcaactttagctctgatcggctgtcatggaagcccttgggcttggattaaagccaaaactgcatccattttaggtatccccatcgcccagaagcagagtgcatcttggttaaagaagtttaatgacatggccaatgccgccaaggggttagagtggatatccaacaagattagcaagtttattgactggctcagggagaagattgtgccagcagctaaagaaaaagcggagtttttaaataatttgaagcaattgcca-ctgttagagaatcagatcacaaatttagaacaatccgctgcctcacaggaggatcttgaagtaatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaaatttcagccattgtacgctacagaggctaagcgagtttatgttctagagaagaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggctcaccgggcactggaaaatcccttgcaacgggtattattgctcgggctatagcagacaagtatcactccagtgtgtactcacttccaccagacccagatcatttcgacgggtacaaacagcaggtggtcacagtgatggatgacctgtgtcaaaatcccgatggcaaggatatgtcattgttttgtcaaatggtgtccactgtggatttcatcccaccaatggcttctcttgaagagaagggagtttctttcacatctaaatttgtcatcgcatctaccaatgctagcaacattatagtgccaacagtgtctgactctgacgccatccgtcgtaggttttacatggattgtgatattgaagtgacagactcctacaaaacagatttgggtaggttagacgctggacgggctgctaaattgtgctctgaaaacaatactgcaaatttcaaacgctgcagcccactagtgtgtgggaaagctatccaacttagagacagaaagtctaaggtcaggtacagcgtggacacggtggtctctgaacttgttagagagtacaacagcaggtccgctattggtaacacaattgaagcactgttccaaggcccacccaagttcaaaccaattagaatc---aatcttgaggagaagccagccccagacgctattagcgatctcctcgctagtgtagacagcgaggaagtgcgtcaatactgc-agggaacaaggctggatcatccctgaaactcccaccaatgttgaacgacacctcaatagagcagtgctagtcatgcaatccatcgccactgtggtggcagttgtatcactggtgtacgtcatttataagctctttgcaggattccaaggtgcgtattctggtgcccccaagcaagtgctcaagaaacctgttctccgtacggcaacagtgcagggcccaagtcttgactttgctctctctttgctgagaaggaatatcaggcaagttcaaacagaccaagggcatttcactatgctaggtgtcagagaccgcttggccgttcttccacggcactcacaacctgggaagaccatttgggtggagcacaaacttgtgaacattcttgatgcggtcgagctagtggatgagcagggtgttaatttagaactcacattggtgacactagacactaatgagaaatttagagatatcaccaagttcattccagaaatcattagcggcgctagtgatgcaactttagtgattaacacagaacacatgccatcaatgtttgttccagtgggggatgtcgtacagtatggattcttgaaccttagtggtaaaccaacccataggaccatgatgtataattttcctacaaaagcttggcagtgtggaggcgtagtcacatcagtcggtaagatcattggcatccacattggcggtaatgggcgtcaaggattctgtgctggcttgaagaggagttacttcgcaagtgaacaaggtgagatccaatgggtgaaatctaacaaggaaactggtagactgaacatcaatggaccaacacgcactaagctggaacccagtgtgtttcatgacgtgtttgagggcaacaaggatccagcagtcctaacaaacaaagatcctagattggaggttgactttgaacaagccctattctccaagtatgtgggcaatgtattgcatgaacctgatgagtatgtacatcaagctgctctccactatgcaaaccaacttaagcaattggatataaacactaataaaatgagcatggaggaggcatgttatggtacagaaaacctggaagcgatagacctccacaccagtgcagggtacccatatagcgctctgggaatcaagaaaagagacatcctcgacccattgaccagggacgtctctaagatgaaattttacatggataaatatgggttggatctgccatactccacttatgttaaagatgaactcaggtctctagataagatcaagaaagggaagtcacgcctgatagaggccagtagcttgaatgattctgtttatcttagaatgacctttggacatctttacgaagtgtttcatgccaatcccggcactgtgactggttcagcagttggttgtaacccagacgtgttttggagtaagctgccaattttgttgcctggttcgctttttgcttttgactattcaggatatgatgctagcctcagtccggtgtggtttagagctttggagacagtgctacgggagattggttattcggaagaagcagtgtcattaattgaggggataaaccacacccaccacgtgtaccgaaacaaaacatactgtgttctcggtggaatgccctcggggtgttccggcacttctatcttcaattcaatgattaacaacattatcatcagaacccttttgatcaggaccttcaaggggatagacctggatgagcttaacatggtggcttatggggatgatgtgctagctagttatcctttccctattgactgccttgaactagctaggactggtaaggagtatggattgaccatgacgcctgcagataaatcgccctgctttaatgaagttacatgggaaaatgctaccttcttgaagagagggtttttgccagatcaccagttcccattcttaattcaccctacaatgcccatgaaagaaatccatgaatctatccgatggacaaaagatgcacgcaacactcaagatcacgtgcgctccctgtgcctactggcttggcacaatggcaaggatgaatacgagaaattcgtgagtacaattagatcagttccagttggaaaggcattggcgattccaaactttgagaatttgaggagaaattggctcgaattgtttt--aa-atttgcagctt-------------------------caag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgtcaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575918.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_20574
--------------------------------------------------------------------------------------------aaatccttgtgcgcctgg-ttttata---t--ccct---t----ccc-c-----aatcc-gaaacatagaagt------------aatgcgcaccact-gatcaa-tagcaggcgtaacgcgccagttacgtcacga-tcaagcacatctg-tctccccggaccgagtatcaatagactgc-ttacgcggttgaaggagaaagcgttcgttatccggctaactacttcgagaagcc-cagtagcaccatggaagctgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgca-acccccacaggtgactgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgcg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgccttcaaccca-gaggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---atccttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctgttata-----tacctc----tttgtt-ggttttgtaccac-----taacttt--------------aaaatctatagct-acccttaattttatattgaccctcaacacagtcaaa-----catgggttcacaagtgtccactcagcggtctggttctcacgagaattccaattcagctacag-aaggctccaccattaattacactactatcaactattacaaggactcttacgcagccacagcaggcaagcagagcctcaaacaagaccccgacaaatttgctaatcctgtcaaggacattttcactgaaatggcggcgccactgaagtccccatctgctgaggcgtgtggttatagcgatcgtgtggcacaactcaccattggaaactctactatcaccacacaggaagcagcaaatatcatagttggttacggtgagtggccctcgtactgctctgacgatgatgctacagcagtggataaaccaacgcgtccggatgtttcagtgaataggttttacacattagacactaaactgtgggaaaaat------------------catccaaggggtggtactggaaattccccgatgtactgactgaaaccggggtctttggtcaaaatgcacagttccattacttatataggtcagggttttgcattcatgtgcaatgcaacgccagtaagttccatcaaggggcactgctagtcgctatccttccggagtatgttattgggacagtggcaggcggtacaggaacag------aggacagtcaccctccttacaaacaaacacaacctggtgctgacggttttgagctgcaacacccgtacgtgcttgatgctgggatccctatatcacaactgacagtgtgccctcaccagtggattaatctacgaactaataattgtgccacgataatagtgccatatatgaacacactgccttttgactctgccttgaaccattgcaactttgggttgctagttgtgcctattagcccattagattttgaccaaggggcgaccccagttattcccatcactatcactctagctccaatgtgctctgagtttgcaggtcttaggcaagcagtcactcaaggctttcctacagagctgaagccagggacaaatcaatttttgaccaccgatgacggcgtctcggcgcccattttaccaaacttccaccccactccgtgtattcacatacccggtgaggtcagaaacttacttgaattgtgccaagtggaaaccatccttgaagttaacaa----------cgtgcctaccaatgctaccagtttg------atggaaaggctacgattcccggtatctgctcaagcgg------ggaagggtgaactgtgcgctgtgttcagagccgatccaggaagggacggtccgtggcagtcaaccatgctgggccagctgtgtggatattacactcagtggtcaggatcactagaggtcacttttatgttcaccggatcgttcatggccacgggtaaaatgcttatagcttatacaccccctggaggccccttacccaaggatcgggccacggcgatgctgggcacacacgtcatctgggacttcggattgcaatcgtctgtcacccttgtgataccatggattagcaacactcactacagagcgcatgcccgagatggagtgttcgattactataccacaggattggttagcatttggtatcagacaaactacgtggttccaataggggcgcctaacacagcttacataatagcattggcggcagcccagaagaatttcaccatgaagctgtgcaaagacaccagttacatattacagacagcttccattcagggggataga--------gtggcagatgtgatcg---agagttctat--------------------------aggggacagtatgagtagagcacttactcaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactggacactggtgaagttccagcgctccaagctgctgaaatcggggcatcgtcaaacactagtgacgagagtatgattgaaacacgatgcgttcttaactcacatagtacagcagaaaccactttggacagcttcttcagtagagcaggcttggtaggggagatagacctccctcttgagggcaccac-taacccaaatggttatgctaactgggatatagacataactggctacgcacagatgcgcaggaaagtggagctattcacttatatgcgctttgatgcagaattcacttttgttgcgtgcacccccactggtgaggttgttccacaattactccagtacatgtttgttccccctggcgctcccaaaccagaatctagggagtcgctcgcttggcagactgctacaaacccctcagtttttgttaagttaactgatccaccagcacaggtctcagttccatttatgtcacccgcgagtgcttaccagtggttttacgacgggtaccccacgtttggagaacataaacaggagaaagatcttgaatatggagcgtgtcctaataatatgatgggcactttctcagtgcgaactgtggggtcatcgaaatccaagtatcccttagtcatcagaatatatatgagaatgaagcatgttagggcatggatacctcgtccaatgcgcaaccagaattacttgttcaaagccaacccaaactatgctggcaa----ctccattaaaccaaccggcaccagtcgcaatgccat---cactac---------------------------------------tcttgga------------------------------------------aagtttggtcagcaatctggggccatctatgtgggtaacttcagggtggtcaatcgtcatctcgctactcacaacgactgggcgaatctcgtctgggaggacagctcccgcgatctactagtgtcgtctaccaccgctcagggctgtgacacaatcgcacgttgcaattgtcaaacaggagtgtactactgcaactcaaagaggaagcactacccagtcagcttttcaaaacccagcctcatatatgtggaagctagtgagtattaccctgctagataccaatcacacttgatgcttgctgtgggtcactctgagcctggtgattgtgggggcatcttaaggtgccagcacggtgtagttggtatagtgtccacgggtggcaacgggctcgtcggttttgctgacgtgagagacctcttgtggttagatgaagaagccatggagcaaggtgtgtccgactacatcaag-ggactcggtgacgcattcggaacaggcttcactgatgctgtttccagagaagttgaagctctcaggaaccacctcattgggtccgatggagcggttgagaagatcctaaagaaccttatcaagctgatttcagcgctagtgattgtgatcaggagcgattatgatatggtcaccctcacagcaactttagctctgatcggctgtcatggaagcccttgggcttggatcaaagccaaaactgcagccattttaggtatccccatcgcccagaagcagagtgcatcctggctaaagaaatttaatgacatggccaatgccgccaaagggttagagtggatatctaacaaaattagcaagttcattgactggctcagggagaagattgtgccagcagctaaggaaaaagcggagtttttaaataatttgaagcaattgcca-ctgctagagaatcagatcacaaatttagaacaatccgctgcttcacaagaggatcttgaggcaatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaaattccaaccattgtacgccacagaggctaagcgagtctatgtcctagagaagaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggctcaccaggcactggaaaatcccttgcaacgggtattattgctcgggctatagcagacaagtatcactccagtgtgtactcacttccaccagacccggatcattttgacgggtacaaacagcaggtggtcacagtaatggatgacctgtgtcaaaatcctgatggcaaggatatgtcattgttttgtcagatggtgtccactgtggactttatcccaccaatggcttctcttgaagagaagggagtctctttcacatctaaatttgtcatcgcatctaccaatgctagcaacattatagtgccaacagtgtctgactctgatgccatccgtcgcaggttttacatggattgtgatattgaagtgacagactcctacaaaacagatttgggtaggttagacgctggacgggctgccaaattgtgctctgaaaacaatactgcaaatttcaagcgctgcagcccactagtgtgtgggaaagctatccaacttagagacagaaagtctaaggtcaggtacagcgtggacacggtggtctccgaacttgttagagagtacaacagcagatccgctattggtaacacaattgaagcactgttccaaggcccacccaagttcagaccaattagaatc---aatcttgaggagaagccagccccagacgctattagcgatctcctcgctagtgtggacagcgaggaagtgcgtcaatactgc-agggaacaaggctggatcatccctgaaactcccaccaatgttgaacgacacctcaatagagcagtgctagtcatgcaatccatcgccactgtagtggcagttgtctcactggtgtacgtcatttataagctctttgcagggttccaaggtgcgtattctggtgcccctaagcaagtgctcaagaaacctgttctccgcacggcaacagtgcagggtccaagtcttgactttgctctctctttgctgagaaggaatatcaggcaagttcaaacagaccaagggcatttcactatgctaggtgtcagagaccgcttggccgttctcccacgacactcgcaacctgggaagaccatttgggtggaacacaaacttgtgaatattctcgatgcagtcgagctagtggatgagcagggtgttaatttagaactcacattggtgacactagacactaatgagaaatttagagatattaccaaattcattccagaaaccattagtggcgctagtgatgcaaccttagtgattaacacagaacacatgccatcaatgtttgttccagtgggggatgtcgtacagtatggattcttgaaccttagtggtaaaccaacccataggaccatgatgtacaattttcctacaaaagctggacagtgcgggggcgtagtcacatcagtcggtaagatcattggcatccacattggtggtaacgggcgtcaaggattctgtgctggtttgaaaaggagttacttcgcaagtgaacaaggtgagatccaatgggtgaaatctaacaaggaaactggtagactgaacatcaatggaccgacacgcactaagctggaacccagtgtgtttcatgacgtgtttgagggcaacaaggaaccagcagtcctaacaaacaaagatcctagattggaggttgattttgaacaagccctattctccaagtatgtgggcaatgtattgcatgaacctgacgagtacgtacatcaagctgctctccactatgcaaaccaacttaagcaattggatataaacaccaataaaatgagcatggaggaggcatgttatggtacggaaaacctggaagcgatagacctccacaccagtgcagggtacccatatagcgctctgggaatcaagaaaagagacatcctcgatccattgaccagagacgtctctaagatgaaattttacatggataaatatgggttggatctgccatactccacttatgttaaagatgaactcaggtctctagacaaaatcaagaaagggaagtcacgcctgatagaggctagtagtttgaatgattctgtttatctcagaatgacctttggacatctttacgaagtatttcatgccaatcccggcactgtgactggttcagcagttggttgtaacccagacgtgttttggagcaagctgccgattttgttgcctggctcgctttttgcttttgactattcagggtatgatgctagcctcagtccggtgtggtttagagctttggagacagtgctacgggagattggttattcggaagaagcagtgtctctaatcgaggggataaaccacacccaccacgtgtaccgaaacaaaacatactgtgttctcggtggaatgccctcggggtgttccggcacttctatcttcaattcaatgattaacaacattattatcagaacccttttgatcagaacctttaaggggatagatctggatgaactaaatatggtggcttatggggatgatgtgctggctagttatcctttccctattgactgccttgaattagctaggactggcaaggagtatggattgaccatgacgcctgcagataaatcgccctgtttcaatgaagtaacatgggaaaatgctaccttcttgaagagagggtttttgccagatcaccaattcccattcttaatccaccctacaatgcccatgaaagaaatccatgagtctatccgatggacaaaagatgcacgcaatactcaagatcacgtgcgctccctgtgcctactggcttggcacaatggcaaggatgaatacgaaaaatttgtgagagcaattagatcagttccagttggaaaggcattggcgattccaaactttgagaatttgaggagaaattggctcgaattgtttt--aa-acttgcagctt-------------------------aaag---------------ctgaaccc-caccagaa----atc------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575917.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_10196
-------------------------------------ggcta-c-----------------------------------ctctga-tttac-caatccttgtgtgcct-g-tttta-a---t--ccct---t----ccc-t-----aattc-caaacatagaagt------------aatgcgcaccact-gatcaa-tagcaggcgtaacgcaccagttacgtctcga-tcaagtacatctg-tctccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaagcgttcgtcatccggctaactacttcgagaagcc-cagtaacaccatggaagctgcagggtgtttcgctcagca--ctc-ccccc---gtgtagatcaggtcgatgagccactaca-acccccacaggtgactgtggtagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgcg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttatattggctgcttatggtaacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgtaatagagctgttata-----tacctg----tttgtt-ggttttgtaccac-----taacttt--------------aaaatctataact-accctcaattttatattgaccctcaacacagttaaa-----catgggttcacaagtgtctactcagcggtccggctcccacgaaaattccaattcagctacag-aaggctccaccattaattacactaccatcaactattacaaggactcttatgctgctacagcaggcaagcagagcctcaaacaagaccctgataagtttgctaatcctgtcaaggacgttttcaccgaaatggccgcgccactgaagtctccatccgctgaggcgtgtggttatagcgatcgcgtggcacaactcaccattggaaactccaccatcaccacacaggaagcagcaaatatcatagttggctatggtgagtggccctcatactgctctgacgatgatgctacagcggtggataaaccaacgcgcccggatgtttcagtgaataggttttacacattggacactaaactgtgggaaaaat------------------catccaaggggtggtactggaagttccctgatgtattaactgaaaccggggtctttggtcaaaatgcacagttccattatttatataggtcagggttttgcattcatgttcaatgcaatgctagtaagttccatcaaggggcactgctagtcgctatccttccagagtatgttatagggacagtagcaggcggtacaggaacag------aggatagtcaccctccttacaaacaaacacaacccggcgccgacggttttgagctgcaacacccgtacgtgcttgatgccgggatccctatatcacaattgacagtgtgcccccaccagtggattaatctgcgaaccaacaactgcgccacgataatagtgccatatatgaacacactgccttttgactctgccttgaaccattgtaactttgggttgttggttgtgcccattagcccattagattttgaccaaggggcaaccccggtcatccctattactatcactctagctccaatgtgctctgagtttgcaggtcttaggcaagcagtcacccaaggctttcccacagagctgaaaccagggacaaaccaatttttgaccaccgacgacggtatctcagcgcccattttaccgaacttccaccccaccccgtgtattcacatacccggcgaggttaggaacttgcttgagttgtgccaagtggagaccatccttgaagttaacaa----------cgtgcctaccaatgctaccagtttg------atggaaaggctacgattcccggtgtctgctcaagcgg------ggaaaggtgaattgtgcgccgtgttcagagccgatcccggaagggacggtccgtggcagtcaaccatgctgggccagctgtgtggatattacactcagtggtcaggatcactggaggtcacttttatgtttactggatctttcatggccacgggtaaaatgcttatagcttatacacctcctgggggccccttacccaaggatcgggccacagcgatgctgggcacacacgtcatctgggattttgggctacaatcgtctgtcaccctcgtgataccatggatcagcaacactcactacagagcgcatgctcgggatggggtgttcgattactataccacagggctggttagtatctggtatcagacaaactacgtggttccaattggggcgcccaacacagcttacataatagcactggcggcagcccaaaagaatttcaccatgaaattgtgcaaggacaccagtcacatattacagacagcctccattcagggagacagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagatagtgtgagtagagcacttacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactggatactggtgaagttccagcgctccaagctgctgaaattggggcatcgtcaaatactagtgacgagagtatgattgaaacacgatgcgttcttaactcacatagcacagcagaaaccactttggacagcttcttcagtagagcaggcttggtaggggagatagatctccctcttgagggtactac-taacccaaatggttatgctaactgggatatagacataactggctacgcacagatgcgcaggaaagtggagctattcacttacatgcgctttgatgcagaattcacttttgttgcgtgcacccctactggtgaggttgttccacaattactccagtatatgtttgtcccccctggcgctcccgagccagaatctagggaatcactcgcttggcagactgctacaaacccctcagtttttgtcaagttaactgatcccccagcacaggtctcagttccatttatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagagcataaacaggagaaagatcttgaatatggagcatgtcctaataatatgatgggcactttctcggtgcgaactgtggggtcatcgaagtccaagtatcccttagttatcaggatatatatgagaatgaagcatgtcagggcatggatacctcgtccaatgcgcaaccaaaactacttgttcaaagccaatccaaactatgctggtaa----ctccattaaaccaaccggcaccagtcgtaatgccat---cactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctacgtgggtaacttcagggtggtcaatcgtcacctcgctactcacaatgactgggcgaatctcgtctgggaagacagctctcgcgatctactagtgtcgtctaccaccgcccagggctgtgacacaatcgcacgttgcgattgtcaagcaggagtgtactattgcaactcaaagaggaagcactatccagtcagcttttcaaaacccagcctcatatatgtggaagctagtgagtactaccctgctagataccaatcgcacttgatgctcgctgcgggtcactctgaacctggtgattgcgggggcatcttaaggtgtcagcacggtgtagttggtatagtgtccacgggtggcaacgggctcgtcggttttgctgatgtaagagacctcctgtggttagatgaagaagccatggagcaaggtgtgtccgactacatcaag-gggctcggtgacgcgttcggaacaggcttcactgatgctgtttccagagaagttgaggccctcaggaaccacctcattggatccgatggagcggttgagaagatcctaaagaaccttatcaagctgatttcagcgctagtgattgtgatcaggagcgattatgatatggttaccctcacagcaactttagccctgatcggctgtcatggaagcccttgggcttggattaaagccaaaacagcatccattttaggtatccctatcgcccagaagcagagtgcatcttggctaaagaaatttaatgacatggccaatgccgccaaggggttagagtggatatccaacaaaattagcaagtttattgactggctcagggagaagattgtaccagcggctaaggagaaagcggagtttttaaacaatttaaagcaattacca-ctgttagagaatcagatcacaaatttggaacaatccgctgcctctcaagaggatcttgaagcaatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaaatttcaaccattgtacgctacagaggctaagcgagtctatgttctagagaagaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggctcaccaggcactggaaaatcccttgcaacgggtattattgcccgggctatagcagacaagtatcactccagtgtgtactcacttccaccagaccctgatcattttgacgggtacaaacagcaggtggtcacagtaatggatgacctgtgtcaaaatcctgatggtaaggatatgtcattgttctgtcaaatggtgtccactgtggatttcatcccaccaatggcttctcttgaagagaagggagtttctttcacatctaaatttgtcatcgcatctaccaatgctagcaacattatagtgccaacagtgtctgactctgacgccatccgtcgcaggtttcacatggattgtgatattgaagtgacagactcatacaaaacagatttgggtaggttagacgctggacgggctgctaaattgtgctctgaaaacaacactgcaaacttcaaacgctgcagcccactagtgtgtgggaaagctatccaacttagagacagaaagtctaaggtcaggtacagcgtggacacagtggtctccgaacttattagagagtacaacagcagatccgctattggcaacacaattgaagcactgttccaaggcccacccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagacgctattagcgatctcctcgctagtgtagacagcgaggaagtgcgtcaatactgc-agggaacaaggctggatcatccctgaaactcctaccaatgttgaacgacacctcaatagagcggtgctagtcatgcaatccatcgccactgtggtggcagttgtctcactggtgtacgtcatttataagctctttgcagggttccaaggtgcgtactctggtgcccccaagcaagtgctcaagaaacctgttctccgcacggcgacagtgcagggtccgagtcttgactttgctctctccttgctgagaaggaatatcaggcaagttcaaacagaccaagggcatttcactatgctaggtgtcagagaccgcttggccgttctcccacggcactcgcaacctgggaagaccatttgggtggagcacaaactcgtaaacattctcgacgcagccgagctagtggatgagcagggtgttaatttagaacttacattggtgacactagatactaatgagaaatttagagatatcaccaagtttattccagagaccattagcggcgctagtgatgcaactttagtgatcaacacagaacacatgccatcaatgtttgtcccagtgggggatgtcgtgcagtacggattcttgaatcttagtggaaaaccaacccataggaccatgatgtacaattttcctacaaaagctggacagtgcgggggcgtagtcacatcagtcggtaagatcattggcatccacattggtggtaatgggcgtcaaggattctgtgctggtttgaaaaggagttacttcgcaagtgaacaaggtgagatccaatgggtgaaatctaacaaggaaactggtagactgaacatcaatggaccgacacgcactaagctggaacccagtgtgtttcatgacgtgtttgagggcaacaaggaaccagcagtyctaacaarcaaagatcctagattggaggttgattttgaacaagccctattctccaagtatgtgggcaatgtattgcatgaacctgatgagtacgtacatcaagctgctctccactatgcaaaccaacttaagcaattggatataaacaccaataaaatgagcatggaggaggcatgttatggtacagaaaacctggaagcgatagacctccacaccagtgcagggtacccatatagcgctctgggaatcaagaaaagagacatcctcgatccattgaccagagacgtctctaagatgaaattttacatggataaatatgggttggatctgccgtactccacatatgttaaagatgaactcagatctttagacaaggtcaagaaggggaagtcacgcttgatagaggctagtagcttgaatgattctgtttatctcagaatgacctttggacatctttacgaagtgttccatgccaatcccggcactgtgactggttcagcggttggttgtaacccagacgtgttttggagcaagctaccaattttgttgcctggttcgcttttcgcttttgactactcagggtatgatgctagcctcagtccggtgtggtttagagctctggagacagtgctacgggagattggttattcggaagaagcagtgtcgctaattgaggggataaaccacacccaccacgtgtaccgaaacaaaacatactgtgttctcggtggaatgccctcggggtgttccggcacttctatcttcaattcaatgattaacaacattatcatcagaacccttttgattagaaccttcaaggggatagatctggatgagctgaacatggtggcttatggggatgatgtgctagctagttatcctttccctattgactgcctcgaactagccaggacaggtaaggagtatggattgaccatgacacctgcagataaatcgccctgctttaatgaagtaacgtgggaaaatgctacctttttgaagagaggatttttgccagatcaccagttcccattcttaattcaccctacgatgcctatgaaagaaatccacgaatctatccgatggacaaaagacgcacgcaacactcaagatcacgtgcgctccctgtgcctactggcttggcacaatggcaaggatgaatacgagaaatttgtgagtacaattagatcagttccagttggaaaggcattggcgattccgaactttgagaacttgaggagaaattggcttgaactgtttt--aa-atttgcagctt-------------------------aaag---------------ctgaaccc-caccagaa----atct-gt------c-g-----cg----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575913.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_11977
------------------------------------------------------------------------------------------------------gtgcct-g-ttttata---t--ccct---t----ccc-t-----aattc-gaaacatagaagt------------aatgcgcaccact-gatcaa-tagcaggcgtaacgcgccagttacgtctcga-tcaagcacatctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaagtgttcgttatccggctaactacttcgagaagcc-cagtagcaccatggaagctgcagggtgtttcgctcaaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggtgaccgtggcagtggctgcgttcgcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtaatcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaagg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgtaatagagctattata-----tacctg----tttgtt-ggttttgtgccac-----taacttt--------------aaaatctatagtt-actctcaattttatattgaccctcaacacagctaaa-----catgggttcacaagtgtctactcaacggtccggctcccatgagaattccaattcagctacag-aaggctccaccattaattacactactatcaactattacaaggactcttacgctgccacagcaggcaagcagagcctcaaacaagaccctgacaagtttgcaaatcctgtcaaggacattttcactgaaatggcggcgccactgaagtctccatccgctgaggcgtgtggttatagtgatcgtgtggcacaactcaccattgggaactccaccatcaccacacaggaagcagcaaatatcatagttggttatggtgagtggccctcatactgctctgacgatgatgctacagcggtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattagacaccaaactgtgggaaaagt------------------catccaaggggtggtactggaaattccctgatgtgttgaccgaaaccggggtctttggtcaaaatgcacagttccattatttatatcggtcagggttttgcatccatgtgcaatgcaacgctagtaagttccatcaaggggcactgctagtcgctatccttccagagtatgtcatcgggacagtggcaggcggtacaggaacag------aggatagtcaccctccttacaaacaaacacaacctggtgctgacggttttgagctgcaacacccgtacgtgcttgatgctgggatccctatatcacaattgacagtgtgccctcatcagtggattaatctacgaaccaataattgcgccacgataatagtgccatacatgaacacactgccttttgactctgccttaaaccattgtaattttggattgttagttgtgcccattagcccattagattttgaccaaggggcgaccccggttatccctatcactatcactctagctccaatgtgctctgagtttgcaggtcttaggcaagcagtcactcaaggctttcctacagagttgaaaccagggacaaaccagtttttgaccactgacgacggcgtttcagcgcccattttaccaaacttccaccccaccccgtgtattcacatacccggcgaggttagaaacttacttgagttgtgccaagtagagaccatccttgaagttaacaa----------cgtccctaccaatgctaccagtttg------atggaaaggctacggttcccggtgtctgctcaagcgg------ggaagggtgaattgtgcgccgtgttcagagccgatccaggaagggacggcccgtggcagtcaaccatgctgggccagctgtgtggatactacactcagtggtcaggatcactggaggttacttttatgttcaccggatcttttatggctacaggtaaaatgcttatagcttatacaccccctgggggccccctacctaaggatcgggccacagcgatgctgggcacacatgtcatctgggacttcgggttacaatcgtctgtcacccttgtgataccatggatcagtaacactcactacagagcacatgcccgagatggggtgttcgattactataccacaggactggttagtatatggtatcagacaaactacgtggtcccaattggggcgcccaacacagcttacataatagcactagcggcagcccaaaagaattttaccatgaagctgtgcaaagacaccagtcacatattacagacagcttccattcagggggataga--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagtagagcacttactcaggccctgccagca--------cccacaggccaaaacacacaagtgagcagtcatcgactggatactggcgaagttccagcgctccaagctgctgaaattggggcatcgtcaaacactagtgacgagagtatgattgaaacacgatgcgttcttaactcacatagcacagcagaaaccactttggacagcttcttcagcagagcgggcttagtcggggagatagatctccctcttgagggtactac-taacccaaatggttatgcaaattgggatatagacataactggctatgcacagatgcgcagaaaagtggagctattcacttatatgcgctttgatgcagaattcacttttgttgcgtgcacccctactggtcaggttgttccacaattactccagtatatgtttgttccccctggcgctcccaagccagattctagggagtcactcgcttggcagactgctacaaacccctcagttttcgtcaagttaactgaccccccagcacaggtttcagttccattcatgtcacccgcgagtgcttaccagtggttttacgacgggtatcccacatttggagagcataaacaggagaaagacctcgaatatggagcgtgtcctaataatatgatgggcactttctcggtgcgaactgtggggtcatcgaaatccaagtaccccttagtcatcagaatatatatgagaatgaagcatgtcagggcatggatacctcgtccaatgcgtaaccaaaattacttgttcaaagccaatccaaactacgctggcga----ctccattaaaccaaccggcaccagtcgcaatgccat---cactac---------------------------------------tcttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggtaacttcagggtggtgaatcgtcatctcgctacccgcaatgactgggcgaatctcgtctgggaagacagctctcgcgacctactagtgtcgtctaccaccgctcagggctgtgacacaatcgcacgttgcgattgtcaaacaggagtgtactattgcaactcaaagaggaagcactacccagtcagcttttcaaaacccagcctcatctacgtggaagctagtgagtattaccctgctagataccaatcacacttgatgcttgctgtgggtcactctgagcctggtgattgtgggggcatcttaaggtgccaacacggtgtagttggtatagtgtccacgggtggtaacgggctcgtcggttttgccgatgtgagagatctcctgtggttggatgaagaagccatggagcaaggtgtgtccgactacatcaag-ggactcggtgacgcattcggaacaggcttcactgatgctgtttccagagaagttgaggccctcaggaaccacctcattgggtccgatggagcggttgagaagatcctaaggaaccttaccaagctaatctcagcactagtgattgtgatcaggagcgaatatgatatggtcacccttacagcaactttagctctgattggctgccatggaagcccttgggcttggattaaagccaaaacagcatccattttaggtatccccatcgcccagaagcagagtgcttcttggctaaagaaatttaatgacatggccaatgctgccaaggggttagagtggatatccaacaaaattagcaagtttattgactggctcagagagaagattgtaccagcagctaaggaaaaagtggagtttttaaataacttgaagcagttgcca-ctgttagagaatcagatcacaaatttagaacaatccgctgcctcacaagaggaccttgaagcaatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaaatttcaaccactgtacgccacagaggctaagcgagtctatgctctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggctcaccaggcactggaaagtcccttgcaacgggcattattgcccgggctgtagcagacaagtatcactccagtgtgtactcactcccaccagacccagatcattttgatgggtacaaacagcaggtggtcacagtaatggatgacctgtgtcaaaatcctgatggcaaggatatgtcattgttttgtcaaatggtgtccactgtggatttcatcccaccaatggcttctctcgaagagaagggagtttctttcacatctaaatttgtcattgcatctactaatgctagcaacattatagtgccaacagtgtctgactctgacgccatccgtcgcaggttttacatggattgcgatattgaagtgacagactcttacaaaacagatttgggtaggttagacgctgggcgggctgctaaattgtgctccgaaaacaatactgcaaatttcaaacgctgcagcccactagtgtgtgggaaagctatccaacttagagatagaaagtctaaggtcaggtacagcgtggacacggtagtctccgagcttgttagagagtacaacaacagatccgctattggtaacacaattgaagcactgttccaaggcccacccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagcgatctccttgctagtgtagacagcgaggaagtgcgccaatactgc-agggaacaaggctggatcatccctgaaactcccaccaatgttgaacgacacctcaacagagcagtgctagtcatgcaatccatcgccactgtggtggcagttgtctcactggtgtacgtcatttataagctctttgcagggttccaaggtgcatattctggtgcccctaagcaaatactcaagaaacctgttctccgcacggcaacagtgcagggcccaagtcttgactttgctctctctttgctgagaaggaatatcaggcaagttcaaacaggccaaggtcacttcactatgctaggtgtcagagaccgcttggccgttctcccacgacactcgcaacctgggaagaccatttgggtggagcacaaacttgtgaacattctcgatgcagtcgagctagtggatgagcagggtgttaatttagagctcacattggtaacactagacactaacgagaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaaccttagtgatcaacacagaacacatgccatcaatgtttgtcccagtgggggatgtcgtgcagtatggattcttgaaccttagtggcaaaccaacccataggaccatgatgtacaattttcctacaaaagctggacagtgcgggggcgtggtcacatcggtcggtaagatcattggcatccacattggtggcaatgggcgtcaaggattctgtgctggtttgaagaggagttatttcgcaagtgaacaaggcgagatccaatgggtaaaatctaacaaggaaactggtagactgaacatcaatggaccaacacgcactaagctggaacccagcgtgtttcatgacgtgtttgagggcaacaaggaaccagcagtcctaacaaacaaagatcctaggttggaggttgattttgaacaagccctattctccaagtatgtgggcaatgtattgcatgagcctgatgagtacgtacatcaagctgctcttcactatgcaaaccaacttaagcaactggatataaacactaacaaaatgagcatggaggaggcatgttatggcacggaaaacctggaggcaatagacctccacaccagtgcagggtacccatatagcgctctgggaatcaagaaaagagacatcctcgacccgtcaaccagggatgtctccaaaatgaaattatacatggacaaatatgggttggatctgccatactccacttatgttaaagatgaactcagatctttagataagatcaagaaagggaaatcacgcctgatagaggctagtagcttgaatgattctgtttatcttagaatgacctttggacacctttacgaagtgtttcatgccaatcccggcactgtgactggctcagcagtcggttgtaacccagatgtgttttggagcaaactaccaattttgttgcctggctcgctttttgcttttgattattcagggtatgatgctagcctcagtccggtgtggtttagagctttggagacagtgctacgagagattggttatacggaggaagcagtgtcactaattgaggggataaaccacacccaccatgtgtaccgaaacagaacatactgtgttctcggtggaatgccctcggggtgttctggtacttctatcttcaatacaatgatcaacaacattatcatcagaacccttttgatcagaaccttcaaggggatagatctggatgagctgaacatggtggcttatggggatgatgtgctagctagttatcctttccctattgactgccttgaactagctaggactggtaaggagtatggattgaccatgacgcctgcagacaaatcgccctgcttcaatgaggtaacatgggagaatgccacctttttgaagagaggatttttgccagatcaccagttcccattcttaattcaccctacaatgcccatgaaagaaatccatgaatccatccgatggacaaaagatgcacgcaacactcaagaccacgtgcgctccctgtgcctgctggcttggcacaatggcaaggatgaatacgagagatttgtgagcacaattagatcagttccagttggaaaggcattggcgattccaaactttgagaatttgaggagaaattggctcgaattgtttt--aa-atttgcagctt-------------------------aaag---------------ctgaaccc-caccagaa----atct-gt------c-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575914.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_17000
---------------------------------------------------------------------------------------------aatccttgtgtgcct-g-ttttata---t--ccct---c----ccc-t-----aattc-gaaacatagaagt------------aatgcgcaccact-gatcaa-tagcaggcgtaacgcgccagttacgtctcga-tcaagcacatctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaagtgttcgttatccggctaactacttcgagaagcc-cagtaacaccatggaagctgcagggtgtttcgctcaaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtaatcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgtaatagagctattata-----tacctg----tttgtt-ggttttgtgccac-----taacttt--------------aaaatctatagtt-actctcaattttatattgaccctcaacacagctaaa-----catgggctcacaagtgtctactcaacggtccggctcccatgagaattccaattcagctacag-aaggctccaccattaattacactactatcaactattacaaggactcttatgctgccacagcaggcaagcagagcctcaaacaagaccctgacaagtttgcaaatcctgtcaaggacattttcactgaaatggcggcgccactgaagtctccatccgctgaggcgtgtggttatagtgatcgtgtggcacaactcaccattgggaactccaccatcaccacacaggaagcagcaaatatcatagttggttatggtgagtggccctcatactgctctgacgatgatgctacagcggtggataaaccaacgcgaccggatgtttcagtgaacaggttttacacattagacaccaaactgtgggaaaagt------------------catccaaggggtggtactggaaattccctgatgtgttgaccgaaaccggggtctttggtcaaaatgcacagttccattatttatatcggtcagggttttgcattcatgtgcaatgcaacgctagtaagttccatcaaggggcactgctagtcgctatccttccagagtatgtcatcgggacagtggcaggcggtacaggaacag------aggatagtcaccctccttacaaacaaacacaacctggtgctgacggttttgagctgcaacacccgtacgtgcttgatgctgggatccctatatcacaattgacagtgtgccctcatcagtggatcaatctacgaaccaataattgcgccacgataatagtgccatacatgaacacactgccttttgactctgccttaaaccattgtaattttggattgttagttgtgcccattagcccattagattttgaccaaggggcgaccccagttatccctatcactatcactctagctccaatgtgctctgagtttgcaggtcttaggcaagcagtcactcaaggctttcctacagagttgaaaccagggacaaaccagtttttgaccactgacgacggcgtttcagcgcccattttaccaaacttccaccccaccccgtgtattcacatacccggcgaggttagaaacttacttgagctgtgccaagtagagaccatccttgaagttaataa----------cgtgcctaccaatgctaccagtttg------atggaaaggctacggttcccggtgtctgctcaagcgg------ggaagggtgaattgtgcgccgtgttcagagccgatccaggaagggacggcccgtggcagtcaaccatgctgggccagctgtgtggatactacactcagtggtcaggatcactggagattacttttatgttcaccggatccttcatggccacaggtaaaatgcttatagcttatacaccccctgggggccccctacctaaggatcgggccacagcgatgctgggcacacacgtcatctgggacttcgggttacaatcgtctgtcacccttgtgataccatggatcagtaacactcactacagagcacatgcccgagatggggtgttcgattactataccacaggactggttagtatatggtatcagacaaactacgtggtcccaattggggcgcccaacacagcttacataatagcactagcggcagcccaaaagaatttcaccatgaagctgtgcaaagacaccagtcacatattacagacagcttccattcagggggataga--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagtagagcacttactcaggccctgccagca--------cccacaggccaaaacacacaagtgagcagtcatcgactggatactggcgaagttccagcgctccaagctgctgaaattggggcatcgtcaaacactagtgacgagagtatgattgaaacacgatgcgttcttaactcacatagcacagcagaaaccactttggacagcttcttcagtagagcgggcttagtcggggagatagacctccctcttaagggtactac-taacccaaatggttatgcaaattgggatatagacataactggctatgcacagatgcgcaggaaagtggagctattcacttatatgcgctttgatgcagaattcacttttgttgcgtgcacccctactggtgaggttgttccacaattactccaatacatgtttgttccccctggcgctcccaagccagattctagggagtcactcgcttggcagactgctacaaacccctcagttttcgtcaagttaactgaccccccagcacaggtttcagttccattcatgtcacctgcgagtgcttaccagtggttttacgacgggtatcccacatttggagagcataaacaggagaaagatctcgaatatggagcgtgtcctaataatatgatgggcactttctcggtgcgaactgtggggtcatcgaaatccaagtaccccttagtcatcagaatatatatgagaatgaagcacgtcagggcatggatacctcgtccaatgcgtaaccaaaattacttgttcaaagccaatccaaactacgctggcaa----ctccattaaaccaaccggcaccagtcgcaatgccat---cactac---------------------------------------tcttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggtaacttcagggtggtgaatcgtcatctcgctacccgcaatgactgggcgaatctcgtatgggaagacagctctcgcgacctattagtgtcgtccaccaccgctcagggctgtgacacaatcgcacgttgcaattgtcaaacaggagtgtactattgcaactcaaagaggaagcactacccagtcagcttttcaaaacccagcctcatctacgtggaagctagtgagtattaccctgctagataccaatcacacttgatgcttgctgtaggtcactctgagcctggtgattgtgggggcatcttaaggtgccaacacggtgtagttggtatagtgtccacgggtggtaacgggctcgtcggttttgccgatgtgagagatctcctgtggttggatgaagaggccatggagcaaggtgtgtccgactacatcaag-ggactcggtgacgcattcggaacaggcttcactgatgctgtttccagagaagttgaggccctcaggaaccacctcattgggtccgatggagcagttgagaagatcctaaagaaccttatcaagctgatctcagcactagtgattgtgatcaggagcgaatatgatatggtcacccttacagcaactttagctctgattggctgccatggaagcccttgggcttggattaaagccaagacagcatccattttaggtatccccatcgcccagaagcagagtgcttcttggctaaagaaatttaatgacatggccaatgctgccaaggggttagaatggatatccaacaaaattagcaagtttattgactggctcagggagaagattgtaccagcagctaaggaaaaagtggagtttttaaataacttgaaacagttgcca-ctgttagagaatcagatcacaaatttagaacaatccgctgcctcacaagaggaccttgaagcaatgttcgggaatgtgtcatacctcgccca---------tttctgtcgcaaatttcaaccactgtacgccacagaggctaagcgagtctatgctctggagaagagggtgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggctcaccaggcactggaaagtcccttgcaacgggcattattgcccgggctgtagcagacaagtatcactccagtgtgtactcactcccaccagacccagatcattttgatgggtacaaacagcaggtggtcacagtaatggatgacctgtgtcaaaatcctgatggcaaggatatgtcattgttttgtcaaatggtgtccactgtggatttcatcccaccaatggcttctctcgaggagaagggagtttctttcacatctaaatttgtcattgcatctactaatgctagcaacattatagtgccaacagtgtctgactctgacgccatccgtcgcaggttttacatggattgtgatattgaagtgacagactcttacaaaacagatttgggtaggttagacgctgggcgggctgctaaattgtgctccgaaaataatactgcaaatttcaaacgctgcagcccactagtgtgtgggaaagctatccaacttagagatagaaagtctaaggtcaggtacagcgtggacacggtagtctccgagcttgttagagagtacaacaacagatccgctattggtaacacaattgaagcactgttccaaggcccacccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagatgctattagcgatctccttgctagtgtagacagcgaggaagtgcgtcaatactgc-agggaacaaggctggatcatccctgaaactcccaccaatgttgaacgacacctcaatagagcagtgctagtcatgcaatccatcgccactgtggtggcagttgtctcactggtgtacgtcatttataagctctttgcagggttccaaggtgcatattctggtgcccctaagcaagtactcaagaaacctgttctccgcacagcaacagtgcagggcccaagtcttgactttgctctctctttgctgagaaggaatatcaggcaagttcaaacagaccaaggtcacttcactatgctaggtgtcagagaccgcttggccgttctcccacggcactcgcaacctgggaagaccatttgggtggagcacaaacttgtgaacattctcgatgcagtcgagctagtggatgagcagggtgttaatttagaactcacattgataacactagacactaacgagaaatttagagatatcaccaagttcattccagagaccattagcagcgctagtgatgcaaccttagtgatcaacacagaacacatgccatcaatgtttgtcccagtgggggatgtcgtgcagtatggattcttgaaccttagtggtaaaccaacccataggaccatgatgtacaattttcccacaaaagctggacagtgcgggggcgtggtcacatcagtcggtaagatcattggcatccacattggtggcaatgggcgtcaaggattctgtgctggtttgaagaggagttatttcgcaagtgaacaaggcgagatccaatgggtaaaatctaacaaggaaactggtagactgaacatcaatggaccaacacgcactaagctggaacccagtgtgtttcatgacgtgtttgagggcaacaaggaaccagcagtcctaacaaacaaagatcctaggttggaggttgattttgaacaagccctattctccaagtatgtgggcaatgtattgcatgagcctgatgagtacgtacatcaagctgctcttcactatgcaaaccaacttaagcaactggatataaacactaacaaaatgagcatggaggaggcatgttatggcacggaaaacttggaagcaattgacctccacaccagtgcagggtacccatatagcgctctgggaattaagaaaagagacatcctcgacccattgaccagggatgtctctaagatgaaattatatatggacaaatatgggttggatctgccatactccacttatgttaaagatgaactcagatctttagataagatcaagaaagggaagtcacgcctgatagaggctagtagcttgaatgattctgtttaccttagaatgacctttggacacctttacgaagcgtttcatgccaatcccggcactgtgactggctcagcagtcggttgtaacccagatgtgttttggagcaaactaccaattttgttgcctggttcgctttttgcttttgattattcagggtatgatgctagcctcagtccggtgtggtttagagctttggagacagtgctacgggagattggttattcggaggaagcagtgtcactaattgaggggataaaccacacccaccatgtgtaccgaaacaaaacatactgtgttctcggtggaatgccctcggggtgttctggcacttctatcttcaattcaatgattaacaacattatcatcagaacccttttgatcagaaccttcaagggaatagatctggatgagctgaacatggtggcttatggggatgatgtgctagctagttatcctttccctattgactgccttgaactagctaggactggtaaggagtatggattgaccatgacgcctgcagacaaatcgccctgcttcaatgaagtaacatgggagaatgccacctttttgaagagaggatttctgccagatcaccagttcccattcttaattcaccctacaatgcccatgaaagagatccatgaatccatccgatggacaaaagatgcacgcaacactcaagatcacgtgcgctccctgtgcctgctggcttggcacaatggcaaggatgaatacgagaaatttgtgagtacaattagatcagttccagttggaaaggcattggcgattccaaactttgagaatttgaggagaaattggctcgaattgtttt--aa-atttgcagctt-------------------------aaag---------------ctgaaccc-caccagaa----at-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ357379.1_Human_enterovirus_71_isolate_236-TW86_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcactctgatttcacgaaatctttgtgcgcct-g-ttttata---t--ccct---t---cccc-c-----agtct-gaaacatagaagc------------aatgcgcatcact-gatcaa-tagcaggcgtaacgcgccagttacgtcatga-tcaagcacatctg-tctccccggaccgagtatcaatagactgc-ttgcgcggttgaaggagaaacagttcgttacccggctaactacttcgagaagcc-cagtagcactatggaagctgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-acccccacaggcgactgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgtg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgccctcaaccca-gaggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tatt---attcttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgtaatagagctgttata-----tacctg----tttgtt-ggttttgtgccac-----tgacttt--------------aaaatctatagtt-actcttaatttcatattggctctcaacacaattaaa-----catgggttcacaagtatccactcagcggtccggctcccacgagaattctaattcagctacag-aaggctccaccattagctacactactatcaactattacaaggactcttatgctgctacagcaggcaaacagagcctcaaacaagaccccgacaagtttgctaatcctgtcaaggacatttttactgaaatggcggcgccactgaagtctccaactgctgaggcgtgtggttatagtgatcgtgtggcacagctcaccattggaaactccaccatcactacacaggaagcagcaaacatcatagttggttatggtgagtggccctcatactgctcagacgatgatgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttatacattagacactaaactgtgggaaaaat------------------cgtccaaggggtggtactggaaattccctgatgtattgactgaaaccggggtctttggccaaaatgcacagttccattacttatacaggtcaggattttgtattcatgtgcaatgcaacgctagcaagttccaccagggagcgctgctagtcgctattcttccagagtatgttattgggacagtggcaggtggcacaggaacag------aggatagtcaccctccttataaacagacacaacctggtgctgacggttttgagctgcaacacccgtatgtgcttgatgctggcatccctatatcacaactaacagtgtgccctcaccaatggatcaatttacgaaccaataattgtgccacaataatagtaccatatatgaacacactaccttttgactctgccttgaaccattgcaactttgggttgctagttgtgcccattagcccattagactttgatcagggagcgaccccggttatccccatcactatcactctagctccaatgtgctctgagtttgcaggtcttaggcaagcagtcactcaaggctttcctacagagctgaaaccagggacaaatcaatttttgaccaccgacgacggcgtttcagcgcccatcttaccaaacttccaccccaccccgtgtattcatatacccggtgaggttagaaacttacttgaattgtgtcaagtggaaaccatccttgaagttaataa----------tgtgcctaccaatgctaccagtttg------atggaaaggctacgattcccggtgtccgctcaagcgg------ggaagggtgaactgtgcgctgtgtttagagccgatccaggaagggatggcccgtggcaatcaaccatgctgggccagctgtgtggatattacactcagtggtcagggtcactggaggtcaccttcatgttcaccggatcattcatggccacgggcaaaatgctcatagcttatacaccccctgggggccccctacccaaggaccgagccacagcgatgctgggcacacacgtcatctgggactttggattacaatcatctgtcacccttgtgataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgttcgattactataccactgggctggttagcatctggtatcagacaaactacgtagttccaattggggcacctaacacagcttacataatagcactggcggcagcccagaagaattttaccatgaagctgtgcaaagacactagtcacatattacagacggcttccattcagggggataga--------gtggcggatgtgatcg---agagttctat--------------------------aggggacagtgtgagtagagcactaactcaggccttaccagca--------cccacgggtcagaatacacaggtgagcagtcatcgactggacactggtgaagttccagcgcttcaagctgctgaaattggggcatcgtcaaacactagtgacgagagtatgattgaaacacgatgtgttcttaactcacatagcacagcagaaaccactttagacagcttcttcagtagagcaggcttggtaggggaaatagatctccctcttaagggtactac-caacccaaatggttatgctaactgggacatagacataactggctacgcacagatgcgcagaaaagtggaactattcacttatatgcgttttgatgcagaattcacttttgttgcgtgcaccccttctggtgaggtcgttccacaattgctccagtatatgtttgttccccctggtgcccccaaaccggattccagggaatcactcgcttggcagactgctacgaacccctcagtttttgtcaagttgactgatcctccagcacaggtctccgttccgtttatgtcacccgcgagtgcttaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggaaaaagatcttgagtatggagcatgccctaataacatgatgggcactttctcggtgcgaactgtggggtcatcgaaatccaagtatcctttagtcatcaggatatatatgaggatgaagcatgtcagggcgtggatacctcgtccaatgcgcaaccagaattatttgtttaaagccaatccaaattatgctggcaa----ctccattaaaccaactggcaccagtcgcaatgccat---tactac---------------------------------------tcttgga------------------------------------------aagtttggtcagcagtctggggccatctatgtaggtaacttcagagtggtcaatcgtcatctcgctactcacaatgactgggcgaatctcgtctgggaagacagctcccgcgacctactagtgtcgtctaccaccgctcagggctgtgacacaatcgcacgttgcgattgtcaaacaggagtatactactgcaactcaatgaggaagcactacccagtcagcttctcaaaacccagctttatatatgtggaagctagtgagtattaccctgccagataccaatcacacttaatgcttgctgcaggtcactctgagcctggtgattgtgggggcattttaagatgccagcacggtgtgattggtatagtgtccactggtggtaacgggctcgtcggtttcgctgacgtgagagacctcctgtggttagatgaagaagccatggagcaaggtgtatccgactacatcaag-ggactcggtgacgcattcggaacaggcttcactgatgctgtttccagagaagtagaagctctcagaaatcacctcattgggtccgatggggcagttgagaagatcctgaagaatcttatcaagctgatttcagcactagtgattgtgattaggagtgattatgatatggtcaccctcacagcaaccctagctctgatcggctgtcatggaagcccttgggcttggatcaaagccaaaactgcatccattttaggtatccccatcgcccagaagcagggtgcatcttggctaaagaaatttaatgacatggccagtgccgccaaggggttagagtggatatccaacaaaattagcaagtttattgactggctcagagaaaagattgtgccagcagctaaggagaaagcggagtttttaaataacttgaaacaattgcca-ctgttagagaatcagatcacaaatttagaacaatccgctgcctcacaagaggatcttgaagcaatgtttggaaatgtgtcatacctcgccca---------tttctgtcgcaagtatcaaccattgtacgctacagaggccaagcgagtctatgtcctagagaagaagatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggttcaccgggcactggaaaatcccttgcaacgggtattatcgctcgggctatagcagacaaatatcactccagtgtgtactcgctcccaccagacccagatcattttgatgggtacaaacaacaggtagtcacagtaatggatgacctgtgtcaaaatcctgatggcaaagatatgtcactgttttgtcagatggtgcccactgtagactttattccaccaatggcttcccttgaagagaagggagtttctttcacatctaaatttgtcatcgcatctactaatgctagcaatattatagtgccaacagtgtccgactctgacgccatccgtcgtaggttttacatggattgtgatattgaagtgacaaactcctacaaaacagatttgggtaggttagatgctggacgggctgccaagttgtgctctgaaaacaatactgcaaatttcaaacgctgcagcccactagtgtgtgggaaagccatccaacttagagacagaaagtctaaggtcaggtacagcgtggacacggtggtctccgaacttattagggagtacaacagtagatccgctattggcaacacaattgaagcactgttccaaggcccacccaagttcagaccaattagaatc---aatcttgaggagaagccagccccagacgctattagcgatcttcttgccagtgtggacagcgaagaagtgcgtcaatattgt-agggaacagggctggatcatccctgaaactcccaccaatgttgagcgacacctcaatagagcagtgctagtcatgcaatccatcgccactgtggtggcagttgtctcactggtgtatgtcatttataagctctttgcagggttccaaggtgcgtattctggtgcccccaagcaagtgcttaagaaacctgctcttcgcacggcaacagttcagggcccgagtcttgattttgctctctctttgttgagaaggaatatcaggcaagttcaaacagaccaggggcatttcactatgctaggcgtcagagaccgcttggctgttctcccacggcactcacaacctgggaagaccatttgggtggagcacaaactcgtgaacattctcgatgcagtcgagctagtggatgagcagggtgttaatttagaactcacactggtgacactggacactaatgagaaatttagagatgttaccaagttcattccagagaccattagcggtgctagtgatgcaactttagtgatcaacacagaacacatgccatcaatgtttgtcccagtaggggatgtcgtacagtatggattcttaaaccttagtggtaaaccaacccacaggactatgatgtacaactttcctacaaaagctggacagtgcggaggtgtagtcacatcagttggtaagatcattggcatccacattggtggtaacgggcgtcaaggattctgtgctggtttgaaaaggagttactttgcaagtgaacagggtgaaatccaatgggtaaaatctaacaaggagactggtaggctgaacattaatggaccgacacgcactaagttggaacccagtgtgtttcatgacgtgtttgagggcgacaaggagccagcggtcctaacaagcaaagatcctagattagaggttgattttgaacagaccctattctccaagtacgcgggtaatgtattgcatgaacctgatgagtacgtacatcaagctgccctccactatgcaaaccaacttaaacaattggatataaacaccaacaaaatgagtatggaggaggcgtgttatggtacggaaaacttggaagcgatagacctccacaccagtgcagggtacccatatagcgccctgggaatcaagaagagagacatccttgacccatcgaccagagacgtctccaagatgaagttttacatggataagtatgggttggacctaccgtactccacttatgtcaaagatgaactcaggtccctggataagatcaagaaagggaagtcacgtttgatagaggctagtagcttaaatgattctgtttatctcagaatgacctttgggtatctttacgaagtgtttcatgccaatcccggcactgttactggttctgcagttggttgtaaccctgacgtattttggagcaagctgcccattttgttacctggctcgctttttgcttttgattattcagggtatgatgctagcctcagtccggtgtggtttagagctttggagacagtgctacgggagattggttattcagaagaagcagtgtcactaattgaggggataaaccacacccaccacgtgtaccgaaacaagacacattgtgttctcggtgggatgccctcggggtgttctggcacctctatcttcaattcaatgattaacaacattatcatcagaactcttttgatcagaaccttcaaggggatagatcttgatgagctaaacatggtggcttatggagatgatgtgttagccagctatcctttccctattgattgccttgaattagctaggactggtaaagagtatggattgaccatgacgcctgcagataaatcgccctgcttcaatgaagtgacatgggaaaatgctaccttcctgaagagagggtttctgccagatcaccagttcccattcttaattcaccctacaatgcccatgaaagaaatccatgaatctatccgatggactaaagatgcacgcaacactcaagatcacgtgcgctccctgtgtctactggcctggcacaatggcaaggatgaatacgagaagtttgtgagcacaatcagatcagttccagttgggaaggcattagcgattccaaactttgagaatttgaggagaaattggctcgaattatttt--aa-atttgcagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taa-c-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ357380.1_Human_enterovirus_71_isolate_237-TW86_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcactctgatttcacgaaatccttgtgcgcct-g-ttttata---t--ccct---t--ccccc-c-----agtct-gaaacatagaagc------------aatgcgcatcact-gatcaa-tagcaggcgtaacgcgccagttacgtcatga-tcaagcacatctg-tctccccggaccgagtatcaatagactgc-ttgcgcggttgaaggagaaacagttcgttacccggctaactacttcgagaagcc-cagtagcaccatggaagctgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-acccccacaggcgactgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgtg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgccctcaaccca-gaggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tatt---attcttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctgttata-----taccta----tttgtt-ggttttgtgccac-----tgacttt--------------aaaatctatagtt-actcttaatttcatattggctctcaacacaattaaa-----catgggttcacaagtatccactcagcggtctggctcccacgagaattctaattcagctacag-aaggctccaccattaactacactactatcaactattacaaggactcttatgctgctacagcaggcaaacagagcctcaaacaagaccccgacaagtttgctaatcctgtcaaggatatttttactgaaatggcggcgccactgaagtccccaactgctgaggcgtgtggttatagtgatcgtgtggcacagctcaccattggaaactccaccatcactacacaagaagcagcaaacatcatagttggttatggtgagtggccctcatactgctcagacgatgatgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttatacattagacactaaactgtgggaaaaat------------------cgtccaaggggtggtactggaaattccctgatgtattgactgaaaccggggtctttggtcaaaatgcacagttccattacttatataggtcaggattttgtattcatgtccaatgcaacgctagcaagttccaccagggagcgctgctagtcgctattcttccagagtatgttattgggacagtggcaggtggcacaggaacag------aggatagtcaccctccttataaacagacacaacctggtgctgacggttttgagctgcaacacccgtacgtgcttgatgctgggatccctatatcacaactaacagtgcgccctcaccaatggatcaatttacgaaccaataattgtgccacaataatagtaccatatatgaacacactaccttttgactctgccttgaaccattgcaactttgggttgctagttgtgcccattagcccattagactttgatcaaggagcgaccccggttatccccatcactatcactctagctccaatgtgctctgagtttgcaggtcttaggcaagcagtcactcaaggctttcctacagagctgaaaccagggacaaatcaatttttgaccaccgacgacggcgtttcagcgcccatcttaccaaacttccaccccaccccgtgtattcatatacccggtgaggttagaaacttacttgaattgtgtcaagtggaaaccatccttgaagttaataa----------tgtgcctactaatgctaccagtttg------atggaaagactacgattcccggtatccgctcaagcgg------ggaagggtgaactgtgcgctgtgtttagagccgatccaggaagggacggcccgtggcaatcaaccatgctgggccagctgtgtggatattacactcagtggtcagggtcactggaggtcaccttcatgttcaccggatcattcatggccacgggcaaaatgctcatagcttatacaccccctgggggccccctacccaaggaccgagccacagcgatgctgggtacacacgtcatctgggactttggattacaatcatctgtcacccttgtgataccatggatcagcaacactcactacagagcacatgcccgagatggagtgttcgattactataccactgggctggttagcatctggtatcagacaaactacgtagttccaattggggcacctaacacagcttacataatagcactggcggcagcccagaagaattttaccatgaagctgtgcaaagacactagtcacatattacagacggcttccattcagggggataga--------gtggcggatgtgatcg---agagttctat--------------------------aggggacagtatgagtagagcactaactcaggccttaccagca--------cccacgggtcagaatacacaggtgagtagtcatcgactggacactggtgaagttccagcgcttcaagctgctgaaattggggcatcgtcaaacactagtgacgagagtatgattgaaacacgatgtgttcttaactcacatagcacagcagaaaccactttagacagcttcttcagtagagcaggcttggtaggggaaatagatctccctcttaagggcactac-caacccaaatggttatgctaactgggatatagacataactggctacgcacaaatgcgcagaaaagtggaactattcacttacatgcgttttgatgcagaattcacttttgttgcgtgtaccccttctggtgaggttgttccacaattgttccagtatatgtttgttccccctggtgcccccaaaccggattccagggaatcactcgcttggcagactgctacgaacccctcagtttttgtcaagttgactgatcctccagcacaggtctccgttccgtttatgtcacccgcgagtgcttaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggaaaaagatcttgagtatggagcatgccctaataacatgatgggcactttctcggtgcgaactgtggggtcatcgaaatccaagtatcccttagtcatcaggatatatatgaggatgaagcatgtcagggcgtggatacctcgtccaatgcgcaaccagaattatttgtttaaagccaatccaaattatgctggcaa----ctccattaaaccaactggcaccagtcgcaaagccat---tactac---------------------------------------tcttgga------------------------------------------aagtttggtcagcgatctggggccatctatgtaggtaacttcagagtggtcaatcgtcatctcgctactcacaatgactgggcgaatctcgtctgggaagacagctcccgtgacctactagtgtcgtctaccaccgctcagggctgtgacacaatcgcacgttgcgattgtcaaacaggagtatactactgcaactcaatgaggaagcactacccagtcagcttctcaaaacccagcctcatatatgtggaagctagtgagtattaccctgccagataccaatcacacttaatgcttgctgcaggtcactctgagcctggtgattgtgggggcattttaaggtgccagcacggtgtgattggtatagtgtccactggtggtaacgggctcgtcggtttcgctgacgtgagagacctcctgtggttagatgaagaagccatggagcaaggtgtatccgactacatcaag-ggactcggtgacgcattcggaacaggcttcactgatgctgtttccagagaagtagaagctctcagaaaccacctcattgggtccgatggggcagttgagaagatcctgaagaatcttatcaagctgatttcagcactagtgattgtgattaggagtgattatgatatggtcaccctcacagcaactctagctctgatcggctgtcatggaagcccttgggcttggattaaagccaaaactgcatccattttaggtatccccatcgcccagaagcagggtgcatcttggctaaagaaatttaatgacatggccagtgtcgccaaggggttagagtggatatccaacaaaattagcaagtttattgactggctcagagaaaagattgtgccagcagctaaggagaaagcggagtttttaaataacttgaaacaattgcca-ctgttagagaatcaggccacaaatttagaacaatccgctgcctcacaagaggatcttgaagcaatgtttggaaatgtgtcatacctcgccca---------tttctgtcgcaagtatcaaccattgtacgctacagaggccaagcgagtctatgtcctagagaagaagatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggttcaccgggcactggaaaatcccttgcaacgggtattatcgctcgggctatagcagacaaatatcactccagtgtgtactcactcccaccagacccagatcattttgatgggtacaaacaacaggtagtcacagtaatggatgacctgtgccaaaatcctgatggcaaggatatgtcactgttttgtcagatggtgtccactgtagactttattccaccaatggcttcccttgaagagaagggagtttctttcacatctaaatttgtcatcgcatctactaatgctagcaatattatagtgccaacagtgtccgactctgacgccatccgtcgtaggttttacatggattgtgatattgaagtgacagactcctacaaaacagatttgggtaggttaggtgctggacgggctgccaagttgtgctctgaaaacaatactgcaaatttcaaacgctgcagcccactagtgtgtgggaaagccatccaacttagagacagaaagtttaaggtcaggtacagcgtggacacggtggtctccgaacttattagagagtacaacagtagatccgctattggcaacacaattgaagcactgttccaaggcccacccaagttcagaccaattagaatc---aatcttgaggagaagccagccccagacgctattagcgatcttcttgccagtgtggacagcgaagaagtgcgtcaatattgt-agggaacagggctggatcatccctgaaactcccaccaatgttgagcgacacctcaatagagcagtgctagtcatgcaatccatcgccactgtggtggcagttgtctcactggtgtatgtcatttataagctctttgcagggttccaaggtgcgtattctggtgcccccaagcaagtgcttaagaaacctgctcttcgcacggcaacagttcagggcccaagtcttgattttgctctctctttgttgagaaggaatatcaggcaagttcaaacagaccaggggcatttcactatgctaggcgtcagagaccgcttggctgttctcccacggcactcacaacctgggaagaccatttgggtggagcacaaactcgtgaacattctcgatgcggtcgagctagtggatgagcagggtgttaatttagaactcacactggtgacactggacactaatgagaaatttagagatgttactaagttcattccagagaccattagcggtgctagtgatgcaactttagtgatcaacacagaacacatgccatcaatgtttgtcccagtgggggatgtcgtacagtatggattcttaaaccttagcggtaaaccaacccacaggactatgatgtacaactttcctacaaaagctggacagtgcggaggtgtagttacatcagttggtaagatcattggcatccacattggtggtaacgggcgtcaaggattctgtgctggtttgaaaaggagttactttgcaagtgaacagggtgaaatccaatgggtaaaatctaacaaggagactggtaggctgaacattaatggaccgacacgcactaagttggaacccagtgtgtttcatgacgtgtttgagggcgacaaggagccagcggtcctaacaagcaaagatcctagattagaggttgattttgaacaggccctattctccaagtacgtgggtaatgtactgcatgaacctgatgagtacgtacatcaagctgccctccactatgcaaaccaacttaaacaattggatataaacaccaacaaaatgagtatggaggaggcgtgttatggtacggaaaacttggaagcgatagacctccacaccagtgcagggtacccatatagcgccctgggaatcaagaagagagacatccttgacccatcgaccagagacgtttccaagatgaaattttacatggataagtatgggttggacctaccgtactccacttatgtcaaagatgaactcaggtccctgggtaagatcaagaaagggaagtcacgtctgatagaggctagtagcttaaatgattctgtttatcttagaatgacctttgggcatctttacgaagtgtttcatgccaatcccggcactgttactggttctgcagttggttgtaaccctgacgtattttggagcaagctgcccattttgttacctggctcgctttttgcttttgattattcagggtatgatgctagcctcagtccggtgtggtttagagctttggagacagtgctacgggagattggttattcagaagaagcagtgtcactaattgaggggataaaccacacccaccacgtgtaccgaaacaagacatattgtgttcttggtgggatgccctcggggtgttctggcacctctatcttcaattcaatgattaacaacattatcatcagaactcttttgatcagaactttcaagggggtagatcttgatgagctaaacatggtggcttatggagatgatgtgttagccagctatcctttccctattgattgccttgagttagctaggaccggtaaagagtatggattgaccatgacgcctgcagataaatcgccctgctttaatgaagtgacgtgggaaaatgctaccttcctgaagagagggtttctaccagatcaccagttcccattcttaattcaccctacaatgcctatggaagaaatccacgaatctatccgatggactaaagatgcacgcaacactcaagatcacgtgcgctccctgtgtctattggcctggcacaatggcaaggatgaatacgagaagtttgtgagcacaatcagatcagttccagttgggaaggcattagcgattccaaactttgagaatttgaggagaaattggctcgaattatttt--aa-atttgcagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ357383.1_Human_enterovirus_71_isolate_252-TW86_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcactctgatttcacggaatctttgtgcgcct-g-ttttaca---t--ccct---t---cccc-t-----agtct-gaaacatagaagc------------aatgcgcatcact-gatcaa-tagtaggcgtaacgcgccagttacgtcatga-tcaagcacatctg-tctccccggaccgagtatcaatagactgc-ttgcgcggttgaaggagaaacagttcgttacccggctaactacttcgagaagcc-cagtagcaccatggaagctgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-acccccacaggcgactgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgtg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgccctcaaccca-gaggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tatt---attcttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctgttata-----tacctg----tttgtt-ggttttgtgccac-----taacttc--------------aaaatctatagtt-actcttaatttcatattggctctcaacataattaaa-----catgggttcacaagtatccactcagcggtccggctcccacgagaattctaattcagctacgg-aaggctccaccattaactacactaccatcaactactacaaggactcttatgctgctacagcaggcaaacagagcctcaaacaagaccccgacaagtttgccaatcctgtcaaggatatttttactgaaatggcggcgccactgaagtccccaactgctgaggcgtgtggttatagtgatcgtgtggcacagctcaccattggaaactccaccatcactacacaggaagcagcaaacatcatagttggttatggtgagtggccctcatactgctcagacgatgatgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttatacattaracactaaactgtgggaaaaat------------------cgtccaaggggtggtactggaaattccctgrtgtattgactgaaaccggggtctttggtcaaratgcacagttccattacttatataggtcaggattttgtattcatgtgcagtgcaacgctagcaagttccatcagggagcgctgctagtcgctattcttccagagtatgttattgggacagtggcaggtggcacaggaacag------aggatagtcaccctccttataaacagacacaacctggtgctgacggttttgagctgcaacacccgtacgtgcttgatgctgggatccctatatcacaactaacagtgtgccctcaccaatggatcagtttacgaaccaataattgtgctacgataatagtgccatatatgaacacactaccttttgactctgccttgaaccactgcaactttgggttgctagttgtgcccattagcccattagactttgatcaaggagcgaccccggttatccccatcactatcactctagctccaatgtgctctgagtttgcaggtcttaggcaagcagtcactcaaggctttcctacagagctgaagccagggacaaatcaatttttgaccaccgatgacggcgtttcagcgcccatcttaccaaacttccaccccaccccgtgtattcacatacccggtgaggttagaaacttacttgaattgtgtcaagtggaaaccatccttgaagttaataa----------tgtgcctaccaatgctaccagtttg------atggaaaggctacgattcccggtatccgctcaagcgg------ggaagggtgaactgtgcgctgtgtttagagccgatccaggaagggacggtccgtggcaatcaaccatgctgggccagctgtgtggatattacactcagtggtcagggtcactggaggttaccttcatgttcaccggatcattcatggccacgggcaaaatgctcatagcttatacaccccctgggggccccctacccaaggaccgagccacagcgatgctgggtacacacgtcatctgggactttggattacaatcatctgtcacccttgtgataccatggatcagcaacactcactacagagcgcatgcccgagatggagtgttcgattactacaccactgggctggttagcatctggtatcagacaaactacgtggttccaattggggcacctaacacagcttacataatagcactggcggcggcccagaagaattttaccatgaagctgtgtaaagacactagtcacatattacagacggcttcaattcagggggataga--------gtggcggatgtgatcg---agagttctat--------------------------aggggacagtgtgagtagagcactaactcaggccttgccagca--------cccacgggtcagaatacacaggtgagcagtcatcgactggacactggtgaggttccagcgcttcaagctgctgaaattggggcatcgtcaaacactagtgacgagagtatgattgaaacacgatgtgttcttaactcacatagcacagcagaaaccactttagacagcttcttcagtagagcaggcttggtaggggaaatagatctccctcttaagggcactac-caacccaaatggttatgctaactgggacatagacataactggctacgcgcagatgcgcagaaaagtggaattattcacttatatgcgttttgatgcagaattcacttttgtcgcgtgtaccccttctggtgaggttgttccacaattgctccagtatatgtttgttccccctggtgctcccaaaccagattccagggaatcactcgcttggcagactgctacaaacccctcagtttttgtcaagttgactgatcctccagcacaggtctccgttccgtttatgtcacccgcgagtgcttaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggagaaagatcttgagtatggagcatgccctaataacatgatgggcactttctcggtgcgaactgtggggtcatcgaaatccaagtatcctttagtcatcaggatatatatgaggatgaagcatgtcagggcgtggatacctcgtccaatgcgcaaccagaattatttgtttaaagccaatccaaattatgctggcaa----ctccattaaaccaactggcaccagtcgcaatgccat---tactac---------------------------------------tcttgga------------------------------------------aagtttggtcagcaatctggggccatctatgtaggtaacttcagagtggtcaaccgtcatctcgctactcacaatgaccgggcgaacctcgtctgggaagacagctcccgcgacctactagtgtcgtctaccaccgctcagggctgtgacacaatcgcacgttgcaattgtcaaacaggagtatactactgcaactcaatgaggaagcactacccagtcagcttctcaaaacccagcctcatatatgtggaagctagtgagtattaccctgccagataccaatcacacttaatgcttgctgcaggtcactctgagcctggtgattgtgggggcattttaaggtgccagcacggtgtgattggtatagtgtccactggtggtaacgggctcgtcggtttcgctgacgtgagggacctcctgtggttagatgaagaagccatggagcaaggtgtatccgactacatcaag-ggactcggtgacgcattcggaacaggcttcactgatgctgtttccagagaagtagaagctctcagaaaccacctcattgggtccgatggggcagttgagaagatcctgaagaatcttatcaagctggtttcagcactagtgattgtgattaggagtgattatgatatggtcaccctcacagcaactctagctctgatcggctgtcatggaagcccttgggcttggatcaaagccaaaactgcatccattttaggtatccccatcgcccagaaacagggtgcgtcttggctaaagaaatttaatgacatggccagtgccgccaaggggttagagtggatatccaacaaaattagcaagttcattgactggctcagagagaaaattgtgccagcagctaaggagaaagcggagtttttaaataacttgaaacaattgcca-ctgttagagaatcagatcacaaatttagaacaatccgctgcctcacaagaggatcttgaagcaatgtttggaaatgtgtcatacctcgccca---------tttctgtcgcaagtatcaaccattgtacgctacagaggccaagcgagtctatgttctagagaaaaagatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggttcaccgggcactggaaaatcccttgcgacgggtattatcgctcgggctatagcagacaaatatcactccagtgtgtactcactcccaccagacccagatcattttgacgggtacaaacaacaggtagtcacagtaatggatgacctgtgccaaaatcctgatggcaaggatatgtcactgttctgccagatggtatccactgtagactttattccaccaatggcttcccttgaagagaagggagtttctttcacatctaaatttgtcatcgcatctactaatgctagcaatattatagtgccaacagtgtccgactctgacgccatccgtcgtaggttttacatggattgtgatattgaagtgacagactcctacaaaacggatttgggtaggttagatgctggacgggctgccaagttgtgctctgaaaacaatactgcaaatttcaaacgctgtagcccactagtgtgcgggaaagccatccaacttagagacagaaagtccaaggtcaggtacagcgtggacacggtggtctctgaactcattagagagtacaacagtagatccgctattggcaacacaattgaagcactgttccaaggcccacccaggttcagaccaattagaatc---aatcttgaggagaagccagccccagacgctattagcgatcttcttgccagtgtggacagcgaagaagtgcgtcaatattgt-agggaacagggctggatcatccctgaaactcccaccaatgttgagcgacacctcaatagagcagtgctagtcatgcaatccatcgccactgtggtagcagttgtctcactggtgtatgtcatttataagctctttgcagggttccaaggtgcgtattctggtgcccccaagcaagtgcttaagaaacctgttcttcgcacggcaacagttcagggcccaagtcttgattttgctctctctttgttgagaaggaatatcaggcaagttcaaacagaccaagggcatttcactatgctaggcgttagagaccgcttggctgttctcccacggcactcacaacctgggaagaccatttgggtggagcacaaacttgtgaacattcttgatgcagtcgagctagtggatgagcagggtgttaatttagaactcacactggtgacactggacactaatgagaaatttagagatgttaccaagttcattccagagaccattagcggtgctagtgatgcaactttagtgatcaacacagaacacatgccatcaatgtttgtcccagtgggggatgtcgcacagtatggatttttaaaccttagtggtaaaccaactcacaggactatgatgtacaactttcctacaaaagctggacagtgcggaggtgtagtcacatcagtcggtaagatcattggcatccatattggtggtaacgggcgtcaaggattctgtgctggtttgaaaaggagttactttgcaagcgaacagggtgaaatccaatgggtaaaatctaacaaggagactggtaggctgaacattaatggaccgacacgcactaaattggagcccagtgtgtttcatgacgtgtttgagggcaacaaggagccagcggtcctaacaaacaaagatcctagattggaggttgattttgagcaggccctattctccaagtacgtgggcaatgtactgcatgaacctgatgagtacgtacatcaagctgccctccactatgcaaaccaacttaagcaattggatataaacaccaacaaaatgagtatggaggaagcatgttatggtacggaaaacttggaagcgatagacctccacaccagtgcagggtacccatatagcgccctgggaatcaagaagagagacatccttgatccattgaccagagacgtctccaagatgaaattttacatggataagtatgggttggacctaccgtactccacttatgtcaaaratgagctcaggtccctggataagatcaagaaagggaagtcacgcttgatagaggctagtagcttaaatgattctgtttatctcagaatgacttttgggcatctttacgaagtgtttcatgccaatcccggcactgtgactggttctgcagttggttgtaaccctgacgtattttggagcaagctgcccattttgttacctggctcgctttttgcttttgattattcagggtatgatgctagcctcagtccggtgtggtttagagctttggagacagtgctacgggagattggttattcagaagaagcagtgtcactaattgaggggataaatcacacccaccacgtgtaccgaaacaagacatattgtgttctcggtgggatgccctcggggtgttccggcacctctatcttcaattcaatgattaacaacattatcatcagaactcttttgatcagaaccttcaaggggatagatcttgatgagctaaacatggtggcttatggagatgatgtgttagccagctatcctttccctattgattgccttgaactagctaggactggcaaagagtatggattgaccatgacgcctgcagataaatcgccctgcttcaatgaagtgacatgggaaaatgctaccttcctgaagagagggtttctgccagatcaccagttcccattcttaattcaccctacgatgcccatgaaagaaatccatgaatctatccgatggactaaagatgcacgcaacactcaagatcacgtgcgctccctgtgtctactggcctggcacaatggcaaggatgaatatgagaagtttgtgagcacaatcagatcagttccagttgggaaggcattggcgattccaaactttgagaatttgaggagaaattggctcgaattatttt--aa-atttgcagttc-------------------------agag---------------ctgaaccc-ccccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ357384.1_Human_enterovirus_71_isolate_266-TW86_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcaccctgatttcacggaatctttgtgcgcct-g-ttttata---t--ccct---t---cccc-c-----agtct-gaaacatagaagc------------aatgcgcatcact-gatcaa-tagcaggcgtaacgcgccagttacgtcatga-tcaagcacatctg-tctccccggaccgagtatcaatagactgc-ttgcgcggttgaaggagaaagagttcgttacccggctaactacttcgagaagcc-cagtagcaccatggaagctgcagggtgtttcgctcggca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-acccccacaggcgactgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtgaacatggtgtg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgccctcaaccca-ggggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tatt---attcttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctgttata-----tacctg----tttgtt-ggttttgtgccac-----taacttt--------------aaaatctatagtt-actcttgatttcatattagctctcaacacaattaaa-----catgggttcacaagtatccactcagcggtccggctcccacgagaattctaattcagctacag-aaggctccaccattaattatactactatcaactattacaaggactcttacgctgctacagcaggcaaacagagcctcaaacaagaccccgacaagtttgctaatcctgtcaaggatatttttactgaaatggcggcgccattgaagtccccaactgctgaggcgtgtggttatagtgatcgtgtggcacagctcaccatcggaaattccaccgtcactacacaggaagcagcaaacattatagttggttatggtgagtggccctcgtactgctcagatgatgatgctacagcagtggataaaccaacgcgcccggatgtttcagtgaataggttttatacattagacaccaaactgtgggaaaaat------------------cgtccaaggggtggtactggaaattccctgatgtgttgactgaaaccggggtctttggtcaaaatgcacagttccattacttatacaggtcaggattttgtattcatgtgcaatgcaacgctagcaagttccaccagggagcgctgctagtcgctattcttccagagtatgttattggaacagtggcaggtggcacaggaacag------aggatagtcaccctccttataaacagacacaacctggtgctgacggttttgagctgcaacacccgtacgtgcttgatgctgggatccctatatcacaattaacagtgtgcccacaccagtggatcaatttacgaaccaataattgtgccacgataatagtgccatatatgaacacactaccttttgactctgccttgaaccattgcaactttgggttgctagttgtgcccattagcccattagactttgatcaaggagcgaccccggttatccccatcactattactctagctccaatgtgctctgagtttgcaggtcttaggcaagcagtcactcaaggctttcctacagagctgaaaccagggacaaatcaatttttgaccaccgacgacggcgtttcagcgcccatcttaccaaacttccaccccaccccgtgtattcacatacccggtgaggttagaaacttacttgaattgtgccaagtggaaaccatccttgaagttaacaa----------tgtgcctaccaatgctaccagtttg------atggaaaggctgcgattcccggtatccgctcaagcgg------ggaagggtgaactgtgtgctgtgtttagagctgatccaggaagggatggcccgtggcaatcaaccatgctgggccagctgtgtggatattacactcagtggtcagggtcactggaggttaccttcatgttcaccggatcattcatggccacgggcaaaatgctcatagcttatacaccccctgggggccccctacccaaggaccgagccacagcgatgctgggcacacacgtcatctgggactttggattacaatcatctgtcacccttgtgataccatggatcagcaacactcactacagagcgcatgcccgggatggagtgttcgattactataccactgggctggttagcatctggtaccagacaaactacgtggttccaattggggcacctaacacagcttacataatagcactagcggcagcccagaagaattttactatgaagctgtgtaaagacactagtcacatattacagacggcttccattcagggggataga--------gtggcggatgtgatcg---agagttctat--------------------------aggggacagtgtgagtagagcacttactcaggccttgccagca--------cccacgggtcagaacacacaggtgagcagtcaccgactggacactggtgaagttccagcgcttcaagctgctgaaattggggcatcgtcaaacactagtgacgagagtatgattgaaacacgatgtgttcttaattcacatagcacagcagaaaccactttagacagcttcttcagtagagcaggtttggtaggagaaatagatctccctcttaagggcactac-caacccaaatggttatgctaactgggacatagacataactggctacgcacagatgcgcagaaaagtggaactattcacttatatgcgttttgatgcagaattcacttttgttgcgtgtaccccttctggtgaggttgttccacaattgctccagtatatgtccgtcccccctggtgctcctaaaccggattccagggaatcgctcgcttggcagactgctacgaacccctcagtttttgtcaagttgactgatcctccagcacaggtctccgttccgtttatgtcacccgcgagtgcttaccagtggttttacgacgggtaccccacgtttggagaacacaaacaggaaaaagatcttgagtatggagcatgccctaataacatgatgggcactttctcggtgcgaactgtggggtcttcgaaatccaagtatcctttagtcatcaggatatatatgaggatgaagcatgtcagggcgtggatacctcgtccaatgcgcaaccagaattatttgtttaaagccaatccaaattatgctggcaa----ctccattaaaccaactggcaccagtcgcaatgccat---tactac---------------------------------------tcttgga------------------------------------------aagtttggtcagcaatctggggccatctatgtgggtaacttcagagtggtcaatcgccatctcgctactcacaatgactgggcaaatctcgtctgggaagacagctcccgcgacctattagtgtcgtctaccaccgctcagggctgtgacacaatcgcacgttgcaactgtcaaacaggagtatactactgcaactcaatgaggaagcactacccagtcagtttctcaaaacccagcctcatatatgtggaagctagtgagtattaccctgccagataccaatcacacttaatgcttgctgcaggtcactctgagcctggtgattgtgggggcattttaaggtgccagcacggtgtgattggtatagtgtccactggtggtaacgggctcgtcggtttcgctgacgtgagagacctcctgtggttagatgaagaagccatggaacaaggtgtatccgactacatcaag-ggactcggtgacgcattcggaacaggcttcactgatgctgtttccagagaagtagaagctctcagaaaccacctcattgggtccgatggggcagttgagaagatcctgaagaatcttattaagctaatctcagcactagtgattgtgattaggagtgattatgatatggtcaccctcacagcaactctagctctgatcggctgtcatggaagcccttgggcttggatcaaagccaaaactgcatccatcttaggtatccccatcgcccagaagcagggtgcatcttggctaaagaagtttaatgacatggccagtgccgccaaggggttagagtggatatccaacaaaattagcaagtttattgactggctcagagagaagattgtgccagcagctaaggagaaagcggagtttttaaataacttgaaacaattgcca-ctgttagagaatcagattacaaatttagaacaatccgctgcctcgcaagaggatcttgaggcaatgtttggaaatgtgtcatacctcgccca---------tttctgtcgcaagtatcaaccattgtacgctacagaggccaagcgagtctatgtcctagagaagaagatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggttcaccgggcaccggaaaatcccttgcaacgggtattatcgctcgggctatagcagacaaatatcactccagtgtgtactcactcccaccagacccagatcattttgacgggtacaaacaacaggtagtcacagtaatggatgacctgtgccaaaatcctgatggcaaggatatgtcactgttttgtcagatggtgtccactgtggac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>AB575923.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_20233
-------------------------------------------------------------------------------------ttttacgaaatccttgtgtgcct-g-ttttata---t--ccct---t----ccc-t-----aactt-gaaacgtagaagc------------aatgcgcaacact-gatcaa-tagcaggcgtaacgcgccagttacgtcatga-tcaagcatatctg-ttcccccggactgagtatcaatagactgc-ttacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaagcc-cagtaacaccatggaagctgcagggtgtttcgctcagca--ctt-tcccc---gtgtagatcaggtcgatgagccactgca-atcctcacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgcg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-ggggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--cttt---attcttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgtaatagagctgttata-----tacctg----tttgtt-ggctttgtaccac-----taacttt--------------aaaatctataact-accctcaattttatattaaccctcaatacagttaaa-----catgggttcacaagtgtctgctcagcgatccggctcccacgagaattccaactcagctacag-aaggctccaccattaattacaccaccatcaactattacaaagactcttatgctgcaacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaatcctgtcaatgacattttcactgaaatggccgcgccactgaagtctccatccgctgaggcatgtggttatagcgatcgcgtggcacaactcaccattggaaactccaccatcaccacacaggaagcagcgaatatcatagttggctatggtgagtggccctcatactgctctgacgatgatgctacagcggtggataaaccaacgcgcccagatgtctcagtgaacaggttttacacattggacaccaaactgtgggaaaaat------------------catctaaggggtggtactggaagttccctgatgtattaactgaaaccggagtctttggccaaaatgcacagtttcattacttatataggtcagggttttgcatccatgtgcaatgcaatgctagcaaattccaccaaggggcgctactagtcgctatccttccagagtatgttatagggaccgtggcaggcggcacaggaacag------aggatagtcaccctccttacaaacaaacacaacccggcgctgacggttttgagctgcaacacccgtacgtgcttgatgctgggattcctatatcacaattgacagtgtgcccccaccagtggattaatctgcggaccaacaactgcgccacgataatagtgccatatatgaacacactgcctttcgactctgccctgaaccattgcaattttgggttgttggttgtgcccattagcccattagattttgatcaaggggcaaccccggttatccctattactatcactctagctccaatgtgctctgagtttgcaggtctcaggcaagcagttacccaaggtttccccactgagctaaaaccagggacaaatcaatttttgaccaccgatgacggcgtctcagcgcccattttaccgaacttccaccccaccccgtgtattcacatacccggcgaggttaggaacttgcttgagttgtgccaagtggagaccattcttgaagttaacaa----------cgtacctaccaatgctaccagtttg------atggaaaggctacgattcccggtgtctgcgcaagcgg------ggaagggtgaattgtgcgccgtgtttagagccgatcctggaagggacggtccatggcaatcaacaatgctgggccagttgtgtggatattacacccagtggtcagggtcactggaggtcacttttatgtttactgggtctttcatggccacgggtaaaatgcttatagcttatacacctcctgggggccctttacccaaagatcgggccacagcgatgctgggtacacacgtcatctgggactttgggctacaatcatctgtcacccttgtgataccatggattagtaacactcactacagagcgcatgcccgggatggggtgttcgattactataccacaggactggttagtatctggtatcaaacaaactacgtggttccaattggggcgcccaacacagcttacataatagcactggcggcagcccaaaagaatttcaccatgaagttgtgcaaggacaccagtcacatattacagacagcctctattcagggggatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagatagtgtgagtagagcacttacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactagatactggcgaagttccggcgctccaagctgctgaaattggggcatcgtcaaacactagtgacgagagcatgattgaaacacgatgcgttcttaactcacatagcacagcagaaactaccctggacagtttcttcagtagggcaggcttggtaggggagatagatctccctcttgagggtactac-taacccaaatggttatgctaactgggacatagacataactggctacgcacagatgcgcagaaaagtggagctattcacttacatgcgctttgacgcggaattcacttttgttgcgtgtacccctactggtgaggttgttccacaattactccagtatatgtttgttccccctggtgctcccaaaccagaatccagggaatcactcgcttggcagactgctactaacccctcagtttttgtcaagttaactgatcccccagcacaggtctcagttccattcatgtcacctgcgagcgcttaccaatggttttacgacgggtaccccacgtttggagagcataaacaggagaaagatcttgaatatggagcgtgtcctaataatatgatgggcactttctcggtgcgaactgtggggtcatcgaagtctaagtatcccttagttgtcaggatatatatgagaatgaagcatgtcagggcatggatacctcgtccaatgcgcaaccaaaactacttgttcaaagccaatccaaactatgctggtaa----ctccattaaaccaaccggcaccagtcgtaatgccat---cactac---------------------------------------ccttgga------------------------------------------aaatttggtcagcaatctggggccatctacgtgggcaacttcagggtggtcaaccgtcacctcgctactcacaatgactgggcgaacctcgtctgggaagacagctctcgcgacctactagtgtcgtctaccaccgcccagggctgtgacacaattgcacgttgcgattgtcaaacaggagtgtactattgcaactctaagagaaagcactatccagtcagcttttcaaaacccagcctcatatatgtggaagctagtgagtattaccctgctagataccaatcgcacttgatgcttgctgcgggtcactctgagcctggtgattgcgggggcatcttaaggtgtcaacacggtgtagttggtatagtatccacgggtggcaacgggctcgtcggttttgctgatgtgagagatctcttgtggttggatgaagaagccatggagcaaggcgtgtccgactacatcaag-gggctcggcgatgcgttcgggacaggcttcactgatgctgtgtccagagaagttgaggcccttaggaaccacctcattggatccgatggagcggttgagaagatcctaaagaaccttatcaagctgatttcggcgctagtgattgtgatcaggagcgactatgatatggttaccctcacagcaactttagccctgatcggttgtcatggaagcccttgggcttggattaaagccaaaacagcatccattttgggtatccctatcgcccagaagcagagtgcatcctggctaaagaaatttaatgacatggcgagtgccgccaaggggctagagtggatatccaacaaaattagtaagtttattgactggctcagggagaagattgtgccagcggctagggagaaagcggaatttttaactaatttgaagcaattgccg-ctgttagagaatcagatcacaaatttagagcaatccgctgcctcacaagaggatcttgaagcaatgtttgggaatgtgtcatacctcgccca---------tttctgccgcaaatttcaaccattgtacgccacagaagctaagcgagtctatgttctagagaagaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggctcaccaggcactggaaaatcccttgcgacaggtatcattgctcgggctatagcagacaagtatcactccagtgtgtactcacttccaccagaccctgatcattttgacgggtacaaacagcaggtggtcacggtaatggatgacctgtgtcaaaatcctgatggcaaggatatgtcattgttttgccaaatggtgtccactgtggatttcatcccaccaatggcttctctagaagagaagggagtttctttcacatctaaatttgtcatcgcatccaccaacgctagcaacattatagtgccaacggtgtctgactctgacgccattcgtcgcaggttttacatggattgtgatattgaggtgacagactcatacaaaacagatttgggtaggttagacgctggacgggctgctaaattgtgctccgaaaacaacaccgcaaatttcaaacgctgcagcccattagtgtgcgggaaagctatccaacttagagacagaaagtctaaggtcaggtacagcgtggacacagtggtctctgaacttattagagagtacaacagcagatccgctattggcaacacaattgaagcactattccaaggcccactcaagtacagaccaattagaatc---agtcttgaggagaagccagccccagacgctattagcgatctcctcgctagtgtagatagcgaggaagtgcgtcaatactgc-agagaacaaggctggatcatccctgaaactcccaccaatgttgagcgacatctcaatagagcggtgctagtcatgcaatccatcgctactgtggtggcagttgtctcgctggtgtatgttatttacaagctctttgcagggttccaaggtgcgtattctggcggccccaagcaagtactcaagagacctgttctccgcacggcgacagtgcagggtccgagtcttgactttgctctctccttgctgagaaggaatatcaggcaagttcaaacagaccaagggcattttactatgctaggtgtcagagaccgcttggccgttctcccacgacactcacaacctgggaagaccatctgggtggagcacaaacttgtaaacattctcgacgcagccgagctagtggatgagcagggcgttaatttggaactcacattggtgacactagatactaacgaaaaatttagagatatcaccaagttcattccagagaccattagcggtgctagtgatgcaactttagtgatcaacacagaacacatgccatcaatgtttgtcccagtgggggacgtcgtgcagtacggattcttgaatcttagtggaaagccaacccataggaccatgatgtacaatttccctacaaaagctggacaatgtggaggcgtagttacatcagtcggtaagatcattggcattcacattggcggcaatgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtgaacaaggtgagatccaatgggtgaagcctaacaaggaaactggtagactgaatatcaatggaccgacgcgtactaagctggaacccagtgttttccatgatgtgtttgagggcaataaggaaccagcagtcctaacaagcaaagatcctagattggaggttgactttgaacaagccctattctccaagtatgtaggtaatgtactgcatgaacctgatgaatacgtgcatcaagctgcacttcactatgcaaatcagcttaagcaactggacatcaatactaaaaagatgagcatggaggaagcatgctacggcacagataatctggaagctatagacctccacactagtgctgggtacccatacagcgccctaggcattaagaagagggacatccttgatccagcaactagggatgtctccaagatgaaatcttatatggataagtatgggttggacctaccatactccacctacgtgaaggatgaactcaggtctctggataagatcaagaaagggaaatcgcgtttgatagaggccagtagcctgaatgactctgtctacctcagaatgacttttggacatctttacgaggtgttccatgccaatcctggcactgtgactggttcagcagtaggttgtaacccagatgtgttttggagcaagctaccgattctattgcctggttcactctttgcttttgattattcaggatatgatgccagtcttagtccggtgtggttcagggctctagaggtggtgctgcgggagattggctactcagatgaggccgtgtcactaattgaaggaataaaccacactcaccatgtatatcggaacaaaacatactgtgttcttggtgggatgccctcagggtgctctggtacctccatcttcaattcaatgatcaacaatatcatcatcagaacccttctgattaaaacctttaaagggatagatctggatgaattgaatatggtggcttatggggatgatgtgctcgctagctaccctttccctattgactgccttgaattagctaagactggcaaggaatatgggctgaccatgacacctgcagacaaatcaccctgtttcaacgaagtgacatgggagaacgccacttttctgaaaagagggttcctgccagatcatcaatttccattcttaatacaccccacaatgcctatgaaagaaatccatgaatctattagatggacaaaagacgcacgtaacactcaagatcacgtgcgctccctgtgcctactggcttggcacaatggcaaagatgaatacgaaaaatttgtgagtacaattagatcagttccagttggaaaggcattagcgattccgaactttgagaacttgaggagaaattggctcgaattgtttt--aa-atttgcagctt-------------------------ta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>U22522.1_Human_enterovirus_71_polyprotein_gene_complete_cds
------------------ttaaaa--cag-c-t-gtgggttg-t-tcccactcaca-gggcccac-t-gggcgctagcactctgattttacgaaatccttgtgcgcct-g-ttttata---t--ccct---t----ccc-t-----aattc-gaaacgtagaagc------------aatgcgcaccact-gatcaa-tagtaggcgtaacgcgccagttacgtcatga-tcaagcatatctg-ttcccccggactgagtatcaatagactgc-ttacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaagcc-cagtaacaccatggaagctgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgca-atccccacaggtgattgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgcg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgtaatagagctgttata-----taccta----tttgtt-ggctttgtaccac-----taacttt--------------aaaatctataact-accctcaactttatattaaccctcaatacagttgaa-----catgggttcacaagtgtctactcagcggtccggctcccacgagaattccaattcagctacag-aaggctccaccattaactacactaccatcaactattacaaagactcttatgctgcaacagcaggcaaacaaagcctcaaacaagaccctgataagtttgctaatcctgtcaaggatatcttcactgagatggccgcgccactgaagtctccatccgctgaggcgtgtggttatagtgatcgcgtggcacaactcaccattggaaactccaccatcaccacacaggaagcagcaaatatcatagttggctatggtgagtggccctcatactgctctgacgatgatgctacagcggtggataaaccaacgcgcccagatgtttcagtgaacaggttctacacattggacaccaaactgtgggaaaaat------------------catctaaggggtggtactggaagttccctgatgtattgacagaaaccggagtctttggccagaatgcacagtttcactacttatataggtcagggttttgcattcatgtgcaatgcaatgctagcaagttccatcaaggggcgctgctagtcgctatccttccagagtatgttatagggacagtggcaggcggcacaggaacag------aagacagtcaccctccttacaaacaaacacaacctggcgctgacggttttgagctacaacacccgtacgtgctcgatgctgggattcccatatcacaattgacagtgtgcccccaccagtggattaatctgcggaccaacaactgcgccacgataatagtgccatatatgaacacactgcctttcgactctgccctgaaccattgcaattttgggttattggtcgtgcccattagcccattagattttgatcaaggagcaaccccggttatccctattactatcactctagctccaatgtgctctgagtttggaggtcttaggcaagcagttacccaaggtttccccactgagttaaaaccagggacaaatcaatttttgaccactgacgacggcgtttcagcgcccattctaccaaacttccaccccaccccgtgtattcacatacccggcgaagttaggaacttgcttgagttgtgccaagtggagaccattcttgaagttaacaa----------cgtgcccaccaatgctaccagtttg------atggaaaggctacgattcccggtgtctgcgcaagcgg------ggaagggtgaattgtgcgccgtgtttagagccgatcctggaagggacggcccatggcaatcaacaatgctgggccagctgtgtggatattacacccagtggtcagggtcactggaagtcactttcatgtttaccgggtctttcatggccacgggtaaaatgcttatagcttatacacctcctgggggccccttacccaaagatcgggccacagcaatgctgggtacacacgtcatctgggattttgggctacaatcatctgtcaccctcgtgataccatggatcagcaacactcactacagagcgcatgcccgggatggggtgttcgattactataccacaggactggttagtatctggtatcaaacaaactacgtggttccaattggggcgcccaacacagcttacattttggcactggcggcagcccaaaagaatttcaccatgaaactgtgcaaggacaccagtcacattttacagacagcctctattcagggggatagg--------gtggcagatgtgatcg---agagttctat--------------------------aggagacagtgtgagtagagcacttacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactggatactggcgaagttccagcgctccaagctgctgaaattggggcatcgtcaaatactagtgacgagagtatgattgaaacacgatgcgttcttaactcacatagcacagctgagaccaccttggacagtttcttcagtagggcaggcttggtaggggagatagatctccctcttgagggtactac-taacccaaatggttatgctaattgggacatagacataactggctacgcacagatgcgcaggaaagtcgagctattcacttacatgcgctttgatgcggaattcacttttgttgcgtgtacccctactggtgaggttgttccacaattactccagtatatgtttgttccccctggcgctcccaaaccagaatccagggaatcactcgcttggcagactgctacaaacccctcagtttttgtcaagttaactgatcccccagcacaggtctcagttccattcatgtcacctgcgagcgcttaccagtggttttacgacgggtaccctacgtttggagagcataaacaggagaaagatcttgaatatggagcgtgtcctaataatatgatgggcactttctcggtgcgaactgtggggtcatcgaagtccaagtatcccttagtcgtcaggatatatatgagaatgaagcatgtcagggcatggatacctcgtccaatgcgcaaccaaaactacttgttcaaagccaatccaaattatgctggtaa----ctccattaaaccaactggcaccagtcgtaatgccat---cactac---------------------------------------ccttgga------------------------------------------aagtttggtcagcaatctggggccatctacgtgggcaacttcagggtggtcaatcgacacctcgctactcacaatgactgggcgaaccttgtctgggaagacagctctcgcgacctattagtgtcgtctaccaccgcccagggttgtgacacaattgcacgttgcaattgtcaaacaggagtgtactattgcaactctaagagaaagcactatccagtcagtttttcaaaacccagcctcatatatgtggaagctagtgagtattaccccgctaggtaccagtcgcacctgatgcttgctgcgggtcactctgagtctggtgattgtgggggcatcttaaggtgtcaacacggtgtggttggtatagcctccacaggcggcaacgggcttgtcggttttgctgatgtgagagatctcttatggttagatgaagaagccatggagcaaggtgtgtccgactacatcaag-gggctcggtgacgcattcggaacaggcttcactgatgctgtttccagagaagttgaggcccttaggaaccacctcattggatccgatggagcggttgagaagatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagcgactatgatatggttaccctcacagcaactttagccctgatcgggtgtcatgggagcccttgggcttggattaaagccaaaacagcatccattttaggtatccctatcgcccagaagcagagtgcatcttggttaaagaaatttaatgatatggcgagtgccgccaaggggttagagtggatatccaacaaaattagcaagtttattgactggctcagggagaagattgtaccagcggctaaggagaaagcggaatttttaaccaatttgaagcagttcccc-ctgttagagaatcagatcacacatttagaacaatccgctgcctcacaagaagatcttgaagcaatgtttgggaatgtgtcatacctcgccca---------tttctgtcgcaagtttcaaccattgtacgccacagaagctaagcgagtctatgttctagagaagagaatgaataattacatgcagttcaagagcacacaccgtattgaacctgtatgtctcatcatcaggggctcaccaggcactggaaaatcccttgcgacgggcatcattgctcgggctatagcagacaaatatcactccagtgtgtactcacttccaccagaccctgaccattttgacggatacaaacagcaggtggtcacagtaatggatgacctgtgtcagaatcctgacggcaaggacatgtcattgttttaccaaatggtgtctactgtggatatcataccacccatggcttcccttgaagagaagggagtttccttcacatctaagtttgtcattgcatccaccaatgctagcaacattatagtcccaacagtgtctgactctgacgccattcgtcgcaggttttacatggattgtgatattgaggtaacagactcatccaaaacagatttgggtagattagatgctggacgggctgctaaattgtgctccgaaaacaacactgcaaacttcaaacgctgcagcccactagtgtgtgggaaagctatccaacttagagacagaaagtctaaggtcaggtacagcgtggatacagtggtctctgagcttattcgagagtacaacagcagatccgctattggcaacacaattgaagcactattccaaggcccacccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagacgccattagcgatctcctcgctagtgtagatagcgaggaggtgcgtcagtactgc-agggaacaaggctggatcatccctgaaactcccaccaatgttgagcgacacctcaacagagcggtgctagtcatgcaatccatcgctactgtggttgcagttgtctcactggtgtatgttatttataagctctttgcagggttccaaggtgcgtattctggcgcccccaaccaagtgctcaagaaacctgttctccgcacggcaacagtgcagggtccgagtcttgactttgccctctccttgttgagaaggaatatcaggcaagttcaaacagaccaagggcattttactatgctaggtgtcagagaccgcttggccgttctcccacggcactcacaacctgggaagaccatttgggtggagcacaaacttgtgaacattctcgacgcagccgagctggtggatgagcagggcgttaatttagaactcacattggtgacactagatactaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaactctagtaatcaacacagaacatatgccgtcaatgtttgtacccgtgggggatgtcgtgcagtacggattcttgaatcttagtggaaagccaacccataggaccatgatgtacaatttccctacaaaagctgggcagtgtggaggcgtggtcacatcagtcggtaagatcattggcattcacattggcggcaatgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagcgaacaaggcgagatccaatgggtgaagtctaacaaagaaactggtagactgaatatcaatggaccgacacgcactaagctggaacccagtgtattccatgatgtgtttgaggccaataaggaaccagcagtcttaacaagcaaagatcctagattggaggttgattttgaacaagccctattctccaagtatgtgggtaatgtactgcatgaacctgatgagtacgtgcatcaagctgcactccactatgcaaatcagcttaagcaactggatatcaatactaaaaagatgagcatggaagaagcatgctacggcacagacaacctggaagctatagacctccacactagtgctgggtacccatacagcgccctaggcattaagaagagggacattcttgatccagcaactagggatgtctccaagatgaaatcttatatggataagtatgggttggacctaccatactccacctacgtgaaggacgaacttaggtctctggataagatcaagaaagggaagtcgcgtttgatagaggccagtagcttgaatgactctgtttacctcagaatgacttttggacatctttacgaggtgttccatgccaatcctggcactgtgactggttcagcagtaggttgtaacccagatgtgttttggagcaaactgccaattctattgcctggttcactctttgcttttgattattcaggatatgatgccagtcttagtccggtgtggttcagggctttagaggtggtgttgcgggagattggctactcagaggaggctgtgtcactaattgaaggaataaaccacactcaccatatatatcggaacaaaacatactgtgttcttggtgggatgccctcagggtgctctggcacttccatcttcaattcaatgatcaacaacatcatcatcagaacccttttgattaagacctttaaagggatagatctggatgagttgaatatggtggcctatggggatgatgtgctcgctagttacccttttcctattgattgccttgaattagccaagactggcaaggaatatgggttgaccatgacacctgcaggcaagtcaccctgtttcaacgaagtgacttgggagaacgccacttttctgaaaagagggttcctgccagaccatcaatttccattcttaattcaccccacaatgcctatgaaagaaattcatgaatccattagatggacaaaagacgcacgtaacactcaagatcacgtgcgctccctgtgcctgctggcttggcacaatggcaaagatgaatacgaaaaatttgtgagtacaattagatcagttccagttggaaaggcattagcgattccgaacttcgagaacttgaggagaaattggctcgaattgtttt--aa-atttgcagctt-------------------------aaag---------------ctgaaccc-caccggaa----atctggt------c-g-----cgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575927.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_11316
--------------------------------------------------------------------------------------------gaatctttgtgcgcct-g-ttttaca---c--cccc---t----ccc-c-----aattc-gcaacttagaagc------------aatatacaacact-gatcaa-cagcgggcgtggcgcaccagccatgtcttga-tcaagcacttctg-tttccccggactgagtatcgatagactgc-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-tagtagcaccattgaagctgcagagtgtttcgctcggca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggtaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaggg-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attctcatattggctgcttatggtgacaattaca-------gaattgttaccatatagctattggattggccatccgg--tgtgtaatagagctgttata-----tacctg----tttgtt-ggctttgtgccac-----taacttt--------------aaaatctataact-accctcaattttatattaaccctcaatacagttaaa-----catgggttcacaagtgtctactcagcgatccggctcccacgagaattccaactcagctacag-aaggctccaccattaattacactaccatcaactattacaaagactcttatgctgcaacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggatattttcactgaaatggctgcgccactgaagtctccatccgctgaagcttgtggttatagcgatcgcgtggcacaactcaccattggaaactccaccatcaccacacaggaagcggcaaacatcatagtcggctatggtgagtggccctcatactgctctgatgatgatgctacagcggtggataaaccaacgcgcccagatgtttcagtgaataggttttacacgttggacactaaactgtgggaaaaat------------------catctaaggggtggtactggaagtttcctgatgtattgactgaaaccggagtctttggccagaatgcacagtttcattatttatataggtcagggttttgcattcatgtgcaatgcaatgctagcaagttccatcaaggagcgctgctagtcgctattcttccagagtatgttatagggacagtggcaggcggcacaggaatag------aggacagtcaccctcattataaacaaacacaacccggcgctgacggttttgagctgcagcacccgtacgtgctcgatgctgggattcctatatcacagttgacagtgtgcccccaccagtggattaatttgcggaccaacaactgcgccacaataatagtgccatacatgaacacactgcctttcgactctgccctgaaccattgcaattttgggctgttggttgtgcccattagcccattagattttgaccaaggggcaaccccggttattcctattactatcactctagccccaatgtgctctgagtttgcaggtcttaggcaagcagttacccaaggtttccccactgaactaaaaccagggacaaatcaatttttgaccaccgatgacggcgtctcagcgcccattctaccaaatttccaccccaccccgtgtattcacatacccggtgaagttaggaacctgcttgagttgtgccaagtggagaccattcttgaggttaacaa----------cgtacccaccaatgctaccagtttg------atggaaaggctacgattcccggtgtctgcgcaagcgg------ggaagggtgaattgtgcgccgtgtttagagccgatcctggaagggacggtccatggcaatcaacaatgctgggccagctgtgtggatattacacccagtggtcagggtcactggaggtcacttttatgtttaccgggtctttcatggccacgggtaaaatgcttatagcttatacacctcctggcggccccttacccaaagatcgggccacagcgatgctgggtacacacgtcatctgggattttgggctacaatcatctgtcacccttgtgataccatggatcagtaacacccactacagagcgcatgcccgggatggggtgttcgattactataccacaggactggttagtatctggtaccaaacaaactacgtggttccaattggggcgcccaacacagcttacataatagcactagcggcagcccaaaagaatttcaccatgaagctgtgcaaagataccagtcacatattacagacagcctctattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagatagtgtgagtagagcacttacccaggctctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactggatactggcgaagttccagcgctccaagctgctgaaattggggcatcgtcaaatactagtgacgagagtatgattgaaacacgatgcgttcttaactcacacagcacagcagagaccaccttggacagcttcttcagtagggcaggcttggtaggggagatagatctccctcttgagggtactac-taacccaaatggttatgctaactgggacatagacataactggttacgcacagatgcgcaggaaagtggagctattcacttacatgcgctttgacgcagaattcacttttgttgcgtgtactcctactggtcaggttgttccacaattactccagtatatgtttgttccccctggtgctcccaaaccagaatctagggaatcactcgcatggcagactgctacaaacccctcagtttttgtcaagttaactgaccccccagcacaggtctcagttccattcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccccacgtttggagaacataaacaggagaaagatcttgaatatggagcgtgtcctaacaatatgatgggcactttctcggtgcgaactgtggggtcattgaagtccaagtatcccttagttgtcaggatatatatgagaatgaagcatgtcagggcatggatacctcgcccaatgcgcaaccaaaactacttgttcaaagccaatccaaactatgctggtaa----ctccattaaaccaaccggcactagtcgtagtgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggtcagcaatctggggccatctacgtgggcaacttcagagtggtcaatcgtcacctcgctactcacaacgactgggcgaacctcgtctgggaagacagctcccgcgacctactagtgtcgtctaccaccgcccagggctgtgacacaattgcacgttgcgattgtcaagcaggagtgtactattgcaactctaagagaaagcactatccagtcagcttctcaaaacccagcctcatatatgtggaagctagtgagtattaccctgctagataccaatcgcacttgatgcttgctgcaggtcactctgaacctggtgattgcgggggcatcttaaggtgtcaacatggtgtagttggtatagtgtccacgggtggtaacgggctcgtcggctttgctgatgtgagggatctcttgtggttagatgaagaagccatggagcaaggtgtgtccgactacatcaag-gggctcggtgacgcgttcggaacgggcttcactgatgctgtttccagggaggttgaggcccttaggaaccacctcattggatctgatggagcggttgagaagatcctaaagaaccttattaagctgatttcagcgctagtgattgtgatcaggagtgattatgatatggtcaccctcacagcaactttagccctgatcggttgtcatggaagcccttgggcttggattaaagccaaaacagcatccattttaggtatccctatcgcccagaagcagagtgcttcttggctaaagaaatttaatgatatggcgagtgccgccaaggggttagagtggatatccaacaaaattagcaagtttattgactggctcagggagaagattgtaccagcggctaaggagaaagcggaatttttaactaatttgaagcaattgccg-ctgttagagaaccagatcacaaatttagagcaatccgctgcctcacaagaggatcttgaagcaatgtttgggaatgtgtcatacctcgctca---------tttctgtcgcaaattccaaccattgtacgccacagaagctaagcgagtctatgttctagagaagaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattaggggctcaccaggcactggaaaatcccttgcgaccggtatcattgctcgggctatagcagacaaatatcactccagtgtgtactcacttccaccagaccctgaccattttgacgggtacaaacagcaagtggttacagtaatggatgacctgtgtcaaaatcctgatggcaaggatatgtcattgttttgccaaatggtgtccaccgtggatttcatcccaccaatggcttctcttgaagagaagggagtttctttcacatctaaatttgtcatcgcatctaccaacgccagcaacattatagtgccaacagtgtctgactctgacgccatccgtcgcaggttttacatggattgcgatattgaggtaacagactcatacaaaacagacttgggtaggctagacgctggacgggctgctaaattatgctccgaaaacaacactgcaaacttcaaacgatgcagcccactagtgtgtgggaaggctatccaacttagagacaggaagtctaaggtcaggtacagcgtggacacagtggtctctgaacttattagagagtacaatagcagatccgctattggtaacacaattgaagcactattccaaggcccacccaagttcagaccaattagaatc---agtcttgaggagaagccagccccagacgctattagcgatctcctcgctagtgtagacagcgaggaagtgcgtcaatactgt-agggagcaaggctggatcatccctgaaactcccaccaatgttgagcgacatctcaatagagcagtgttagtcatgcaatccatcgctactgtggtggcagtcgtctcactggtgtacgtcatttacaagctctttgcggggttccaaggtgcgtattctggtgctcccaagcaagtgctcaagaaacctgttctccgcacggcaacagtgcagggtccgagtcttgactttgctctttccttgctgagaaggaatatcaggcaagttcaaacagatcaagggcattttaccatgctaggtgtcagagaccgcttggccgttctcccacggcactcacaacctgggaagaccatttgggtggagcacaaacttgtgaacattcttgacgcagccgagctagtggatgagcagggcgttaatttggaactcacattggtgacactagatactaatgaaaaatttagagatatcaccaagttcattccagagaccattagcggcgctagtgatgcaactttagtgatcaacacagaacatatgccatcaatgtttgtcccagtgggggacgtcgtgcagtacggattcttgaatcttagtggaaagccaactcataggaccatgatgtacaatttccctacaaaagctggacagtgtggaggcgtggtcacatcagtcggtaagatcattggcattcacattggcggtaatgggcgccaagggttctgtgctggtttgaagaggagttacttcgcaagtgaacagggcgagatccaatgggtgaagtctaacaaggaaactggtagactgaatatcaatggaccgacacgcaccaagctggaacccagtgtgttccatgacgtgtttgagggcaataaggaaccagcagtcctaacaagcaaagatcctagattggaggttgactttgaacaagccctattctccaagtatgtgggcaatgtactgcatgaacctgacgagtacgtatatcaagctgcactccactatgcaaatcagcttaagcaactggacatcaatactaaaaagatgagcatggaggaagcatgctacggcacagataacctggaagctatagacctccacactagtgctgggtacccatacagcgccctaggcatcaagaagagggacatccttgatccggcgactagagattctcccaagatgaaatcttatatggataagtatgggttggacctaccatactccacctacgtgaaggatgaactcaggtctctggataagatcaagaaagggaaatcgcgtttgatagaggccagtagcttgaatgactctgtctacctcagaatgacttttggacacctttacgaggtgttccatgctaatcctggcactgtaaccggttcagcagtaggttgtaacccagatgtgttttggagcaaactgccgattttgttgcctggttcactctttgcttttgattattcaggatatgatgccagtcttagcccggtgtggttcagagctctagaggtggtgttgcgggaaattggctactcagaggaggccgtgtcactgattgaaggaataaaccacactcaccatgtatatcggaacaaaacgtactgtgttcttggtgggatgccctcagggtgctctggcacctccatcttcaattcaatgatcaacaatatcattatcagaacccttttgatcaaaacctttaaagggatagatctggatgagttgaatatggtggcctatggggatgacgtgctcgctagttacccttttcctattgactgccttgaattagccaagactggcaaggaatatgggctgaccatgacacctgcagacaaatcaccctgcttcaatgaagtgacatgggagaacgccacttttcttaaaagggggttcctgccagaccaccaatttccattcttgattcaccccacaatgcctatgaaggaaattcatgagtccattagatggacaaaagacgcacgtaacactcaagatcacgtgcgctccttgtgcctactggcttggcacaatggcaaagatgaatatgaaaaatttgtgagtacaattagatcagttccagttggaaaggcattagcgattccgaactttgagaacttgaggagaaattggctcgaattatttt--aa-atttgcagctt-------------------------aaag---------------ctgaaccc-c-ccggaa----atctggt------c-g-----cgt---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575911.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_10076
---------------------------------------------------------------------------------------------aatccttgtgcgcct-g-ttttata---t--cccc---t---ttcc-c-----aagtt-gaaacatagaagt------------aatgcgcaccatt-gatcaa-tagcaggcgtaacgcgccagttacgtctcga-tcaagcacatctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaagcgttcgttacccggctaactacttcgagaaacc-cagtagcaccatggaagctgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagta-tcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaagg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattacg-------gaattgttaccatatagctattggattggccatccgg--tgtgtaatagagctattata-----tatctg----tttgtt-ggctttgtgccat-----taacttt--------------aaagtctacaact-actcttgattttatattgaccctcaacacagttaaa-----catgggctcacaagtgtccactcaacggtccggctcccatgagaattccaactcagctactg-aaggttccactattaactatactactatcaactattacaaggactcttatgccgccacagcaggtaagcagagcctcaaacaagaccctgacaagtttacaaatcctgtcaaggacatcttcaccgaaatggcggcgccactgaagtctccatccgctgaggcgtgtggttatagtgatcgtgtggcacaactcaccattgggaactccaccatcaccacgcaggaagcggcaaacatcatagttggttatggtgagtggccctcatactgctctgacgctgatgctacagcggtggataaaccaacacgcccggatgtttcagtgaacaggttttatacattagacaccaaactgtgggaaaaat------------------catccaaggggtggtactggaaattccctgacgtgttaaccgaaaccggggtctttggtcaaaatgcacaattccattacttataccggtcagggttttgcatccatgtgcaatgcaacgctagtaagttccatcaaggagcactgctagtcgctatcctcccagagtacgtcatcgggacagtggcaggtggtacaggaacag------aggacagtcaccctccttataaacaaacacaacctggcgctgacggttttgaactgcaacacccgtacgtgctcgatgctgggattcctatatcccaattgacagtgtgcccccatcagtggatcaatttgcgaaccaacaattgtgccacaataatagtgccatacatgaacacactgccttttgactctgccttgaaccactgcaattttggactgttagttgtgcccattagtccattagattttgatcaaggggcgactccggttattcccatcactatcactttagctccaatgtgctctgagtttgcaggtcttaggcaagcagtcactcaaggttttcctactgagttgaaaccagggacaaatcagttcttgaccactgatgacggcgtctcagcgcccattttaccaaatttccaccccaccccgtgtattcacatacccggtgaagttaggaacctgcttgagctgtgccaagtagaaaccatccttgaagttaacaa----------cgtgcccaccaacgctaccagcttg------atggagaggctacgattcccggtgtctgctcaagcgg------ggaagggtgaattgtgcgcggtgtttagagctgatcctggaagggacggtccgtggcagtccaccatgctgggccagctgtgtggatactacactcagtggtcaggatcactggaggtcacttttatgttcaccggatctttcatggctacgggtaagatgcttatagcttatacaccccccgggggtcccctacccaaagatcgggccacagcaatgttgggtacacacgtcatctgggatttcgggttacaatcatctgttacccttgtgataccatggatcagcaacacccattacagagcacatgcccgagatggggtgtttgattattataccacaggactggttagtatatggtatcaaacaaactacgtagttccaattggagcgcccaacacagcttacataatagcactagcggcagcccaaaagaacttcaccatgaagctgtgcaaggataccagcgatatattacaaacagcttccatccagggggatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagtagagcactcacccaggccctgccagca--------cccacaggccagaacacacaggtgagcagtcaccgactggacactggcagagttccagcgctccaagccgctgaaattggggcgtcgtcaaatgctagtgacgagagcatgattgaaacgcgatgcgttctcaactcacatagcacagcagaaaccactttggacagcttcttcagtagggcaggtttagtcggggagatagacctccctgttgagggtactac-taacccaaatggttatgcaaactgggatatagacataactggctatgcacagatgcgcaggaaggtggaactattcacctatatgcgctttgatgcagaattcacctttgttgcgtgcacccctactggtcagattgttccacagttactccagtatatgtttgttccccctggcgcccccaagccagattccagggagtcactcgcttggcaaactgctacaaacccctcagtttttgtcaagctaactgaccccccagcacaggtttcagtcccattcatgtcacccgcgagtgcttaccagtggttttatgacgggtatcccacgtttggagagcacaaacaggagaaggatcttgaatatggagcgtgtcctaacaatatgatgggtactttctcagtgcggactgtagggtcttcgaaatccaagtaccctctagttatcagaatatatatgagaatgaagcacgtcagggcatggataccccgtccaatgcgtaaccaaaattacttgttcaaagccaacccaaactatgctggcaa----ctccatcaagccaaccggcaccagtcgcaatgccat---cactac---------------------------------------acttgga------------------------------------------aagttcggtcagcaatctggggccatctacgtgggcaacttcagggtggtgaatcgtcatctcgctacccacaatgactgggcgaatctcgtctgggaagacagctctcgtgacctactagtatcatctactaccgctcagggctgtgacacaatcgcccgttgcaattgtcaaacaggagtgtactattgcaactcaaggagaaagcactacccagtcagcttttcaaaacccagtctcatctacgtggaagctagtgagtattacccagctaggtaccaatcgcaccttatgcttgctgtgggctattccgagcccggagattgtggaggcatccttaggtgccaacatggtgttgttggcatagtgtccactggtggtaatggactcgtcggttttgcagatgtgagagacctcctgtggttagatgaggaggccatggaacaaggggtgtctgactacatcaag-gggcttggtgacgcatttgggacaggcttcactgacgcggtttccagggaggttgaggctctcaagaatcacctcatagggtctgaaggggcagttgagaaaattctgaaaaatcttattaagctgatctctgcactagtgattgtgatcaggagtgattatgacatggtcactctcacggcaaccctagccctaattgggtgtcacggtagcccttgggcttggattaaagctaaaacagcatccgtactaggtatccccattgctcagaaacagagcgcatcgtggcttaagaaattcaatgacatggctaacgctgccaagggattagaatggatatccaataagatcagcaagttcattgattggctcaaggagaaaatcgtgccagcagctaaggaaaaagttgagttcctaaacaatctgaaacagctacca-ttactagagaaccaaatctcaaacttggagcaatctgctgcctcgcaggaggaccttgaagcaatgtttggaaatgtgtcatacctcgctca---------tttctgtcgcaagtttcagccactgtacgccacagaggccaagagagtctacaccctggagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgcctcatcattagaggctctccaggtactgggaagtctctggcaactgggattattgcccgggctattgctgataagtaccactccagtgtgtattcacttcccccagatccagaccacttcgatgggtacaagcagcaagtagtcacagtcatggatgacctgtgtcagaatcctgatggaaaagacatgtcactattctgtcaaatggtgtctactgtggattttattccaccgatggcctctcttgaagagaaaggagtttcttttacatccaaatttgttattgcgtctactaacgctagcaacatcattgtgccaacggtatctgactctgacgctattcgccgcagattttatatggattgtgacatcgaagtgacagattcatacaaaactgatttgggcagattggatgctggacgtgccgctagattgtgctcagagaataacactgcaaattttaaacgctgcagtccactagtgtgcgggaaagctattcaacttagggacagaaagtccaaggtcagatatagtgtggacacggtagtttctgaactcatcagggaatacaacaacaggtctgctattggcaatacaattgaagctttgttccaggggccccccaagttcagacccatcaggatt---agtcttgaagagaaaccagccccagacgctatcagtgatcttctcgctagtgtggatagtgaggaagtgcgtcaatattgt-agagaccaaggttggatcatccccgaaacccccaccaatgtcgagcgccacctcaatagggcagtattagttatgcagtctatcgctactgtagtggcagttgtttcactggtttatgttatctacaagttgtttgcaggatttcaaggtgcatactctggtgcccccaagcaaactctcaagaaaccagttctccgtacagcaacagtgcagggacctagccttgactttgccctctcactattgaggaggaacatcaggcaagttcaaacagaccaagggcacttcaccatgctgggtatcagagatcgcttggctgtcctcccgcgacatgcacagcctgggaagacaatctgggtggaacacaagcttgtgaatgtcttggatgctgtcgagttggtggacgagcaaggagttaatttggagctgaccctagtcactcttgataccaatgagaagtttagggatgttaccaaattcataccagaaagcattagtgccgctagtgacgccacccttgtgattaacacagagcacatgccttccatgtttgtaccagtaggtgatgtcgtgcaatacggctttctgaacctcagtggaaagcctacccaccgtactatgatgtacaacttccctaccaaggcaggccagtgcggtggtgtggtcacctcggtaggtaagattattggcattcatatcggtgggaatggacgccaagggttctgcgctggcctgaaaagaggttactttgcaagtgagcaaggggagatccaatgggtgaagccaaacaaggaaactggtaggttaaacattagcggtcctacccgcacgaaacttgagcctagtgtgttttatgatgtgtttgaaggtaacaaagagccagctgtccttactagtagagatcctaggttggaggtggactttgagcaagccctgttttctaaatatgtagggaatgtgttacatgagcctgacgagtacgtgactcaggctgcactacactatgccaatcaattaaagcagctagacattaataccagtaagatgagcatggaagaagcatgttacggtacagataaccttgaggccattgacctccataccagcgccggttatccatacagtgcactgggaatcaagaaaagggacatccctgacccagttactagagatgtcactaagatgaagttctacatggacaaatatggtttagatctaccctactctacttatgtaaaagatgagcttaggtcactagacaagattaagaaagggaagtcccgtttaattgaggccagcagtctaaacgattctgtttatcttagaatgacttttggtcacctgtatgaagtgtttcatgcaaacccggggacagtaaccggctcagcagtgggctgcaatccggacgtgttctggagtaaactcccaatcctactccctgggtcgctctttgcatttgattactcaggatatgatgctagtctcagccctgtgtggtttagagctctggaggtggtcctgcgggaaattggttactcagaggaagcagtgtccctcatagaaggaattaatcacactcatcatgtgtatcgcaacaagacctattgcgttcttggtgggatgccatcaggctgctcaggcacctccattttcaactcaatgatcaacaacataataatcagaacgctattgatcaaaacattcagagggatagacctagatgagctgaatatggtggcttacggggatgatgtgttggccagttacccttttcccattgattgtcttgagttggcaagaacaggtaaggagtatgggttaactatgacaccagctgataaatcaccttgctttaatgaagtcacttgggaaaatgccaccttcctaaagagagggttcttgcccgatcatcagttccctttcctcattcatcccacgatgcctatgaaggaaatccacgagtcaatacgctggacaaaggatgcacgaaacactcaagatcacgtgcgttccctatgcttattggcatggcacaacgggaaggatgaatatgaaaagtttgtaagtgcaatcagatcagtcccgattgggaaagcactagcaataccaaattttgagaacctgagaaggaattggcttgaattatttt---a-aactacagctt-------------------------ta-g---------------ctgaaccc-caccggga----atttggt------t-a-----aattaat-g-actg--------gggggggtaattatac-ca-ta----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB575912.1_Human_enterovirus_71_gene_for_polyprotein_complete_cds_isolate:_10857
--------------------------------------------------------------------------------tctgattctgcggaatccttgtgcgcct-g-ttttata---t--cccc---t---ttcc-c-----aattt-gaaacatagaagt------------gatgcgcaccatt-gatcaa-tagtaggcgtaacgcgccagttacgtctcga-tcaagcacatctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaagcgttcgttacccggctaactacttcgagaaacc-cagtagcaccatggaagctgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggaga-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaaccca-gaagg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttc---attcttatatcggctgcttatggtgacaattacg-------gaattgttaccatatagctattggattggccatccgg--tgtgtaatagagctattata-----tatctg----tttgtt-ggctttgtgccat-----taacttt--------------aaagtctacaact-actcttgattttatattgaccctcaacacagttaaa-----catgggctcacaagtgtccactcaacggtccggctcccatgagaattccaactcagctactg-aaggttccactattaactatactactatcaactattacaaggactcttatgccgccacagcaggtaagcagagcctcaaacaagaccctgacaagtttacaaatcctgtcaaggacatcttcaccgaaatggcggcgccactgaagtctccatccgctgaggcgtgtggttatagtgatcgtgtggcacaactcaccattgggaactccaccatcaccacgcaggaagcggcaaacatcatagttggttatggtgagtggccctcatactgctctgacgctgatgctacggcggtggataaaccaacacgcccggatgtttcagtgaacaggttttatacattagacaccaaactgtgggaaaaat------------------catccaaggggtggtactggaaattccctgacgtgttaaccgaaaccggggtctttggtcaaaatgcacaattccattacttataccggtcagggttttgcatccatgtgcaatgcaacgctagtaagttccatcaaggggcactgctagtcgctatcctcccagagtacgtcatcgggacagtggcgggtggtacaggaacag------aggacagtcaccctccttacaaacaaacacaacctggtgctgacggttttgaactgcaacacccgtacgtgcttgatgctgggatccctatatcacaattgacagtgtgcccccatcagtggatcaatctacgaaccaataattgtgccacgataatagtaccatacatgaacacactgccttttgactctgccttgaaccactgcaattttggattgttagttgtgcccatcagtccattagattttgatcaaggggcgactccggttattcccatcactatcactttagctccaatgtgctccgagtttgcaggtcttaggcaagcagtcactcaaggttttcctacagagttgaaaccagggacaaaccagttcttgaccactgacgacggcgtttcagcgcccattttaccaaacttccaccccaccccgtgtattcacatacccggtgaggttaggaacttacttgagttgtgccaagtagaaaccatccttgaagttaacaa----------cgtgcccaccaatgctaccagcttg------atggagaggctacggttcccggtgtctgctcaagcgg------ggaagggtgaattgtgcgcggtgttcagagccgatccagggagggacggtccgtggcagtccaccatgctgggccagctgtgtggatactacactcagtggtcaggatcactggaggtcacttttatgttcaccggatctttcatggctacaggtaagatgcttatagcttatacaccccccgggggtcccctacccaaggatcgggccacagcaatgttgggtacacacgtcatctgggatttcgggttacaatcatctgttacccttgtgataccatggatcagcaacacccattacagagcacatgcccgagatggggtgtttgattattataccacaggactggttagtatatggtatcagacaaactacgtagttccaattggagcacccaacacagcttacgtaatagcactggcggcagcccaaaagaacttcaccatgaagctgtgcaaggataccagcgatatattacaaacagcttccatccagggggatagg--------gtggcagatgtgattg---agagttctat--------------------------aggggacagtgtgagtagagcactcacccaggccctgccagca--------cccacaggccagaacacacaggtgagcagtcaccgactggacactggcaaagttccagcgctccaagccgctgaaattggggcgtcgtcaaatgctagtgacgagagcatgattgaaacgcgatgcgttctcaactcacatagcacagcagaaaccactttggacagcttcttcagtagggcaggtttagtcggggagatagacctccctcttgagggtactac-taacccaaatggttatgcaaactgggatatagacataactggctatgcacagatgcgcaggaaggtggaactattcacctatatgcgctttgatgcagaattcacctttgttgcgtgcacccctactggtcaggttgttccacagttactccagtatatgtttgttccccctggcgcccccaagccagattccagggagtcactcgcttggcaaactgctacaaacccctcagtttttgtcaagctaactgaccccccagcacaggtttcagtcccattcatgtcacccgcgagtgcttaccagtggttttatgacgggtatcccacgtttggagagcacaaacaggagaaggatcttgaatatggagcgtgtcctaacaatatgatgggtactttctcagtgcggactgtagggtcttcgaaatccaagtaccctctagttgtcagaatatatatgagaatgaagcacgtcagggcatggataccccgtccaatgcgtaaccaaaattacttgttcaaagccaacccaaactatgctggcaa----ctccatcaagccaaccggcaccagtcgcaatgccat---cactac---------------------------------------acttgga------------------------------------------aagttcggtcagcaatctggggccatctatgtgggtaacttcagggtggtgaatcgtcatctcgctacccacaatgactgggcgaatctcgtctgggaagacagctctcgtgacctactagtatcatctactaccgctcagggctgtgacacaatcgcccgttgcaattgtcaaacaggagtgtactattgcaactcaaggagaaagcactacccagtcagcttttcaaaacccagtctcatctacgtggaagctagtgagtattacccagctaggtaccaatcgcaccttatgcttgctgtgggctattccgagcccggagattgtggaggcatccttaggtgccaacacggtgttgttggcatagtgtccactggtggtaatggactcgtcggttttgcagatgtgagagacctcctgtggttagatgaggaggccatggagcaaggggtgtctgactacatcaag-gggcttggtgacgcatttgggacaggcttcactgacgcggtttccagggaggttgaggctctcaagaatcacctcatagggtctgaaggggcagttgagaaaattctgaaaaatcttattaagctgatctctgcactagtgattgtgatcaggagtgattatgacatggtcactctcacggcaaccctagccctaattgggtgtcacggtagcccttgggcttgggttaaagctaaaacagcgtccgtactaggtatccccattgctcaaaaacagagcgcatcgtggcttaagaaattcaatgacatggctaacgctgccaagggattagaatggatatccaataagatcagcaagttcattgattggctcaaggagaaaatcgtgccagcagctaaggaaaaagttgagttcctaaacaatctgaaacagctacca-ttactagagaaccaaatctcaaacttggagcaatctgctgcctcgcaggaggaccttgaagtaatgtttggaaatgtgtcatacctcgctca---------tttctgtcgcaagtttcagccactgtacgccacagaggccaagagagtctacaccctggagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgcctcatcattagaggctctccaggtactgggaagtctctggcaactgggattattgcccgggctattgctgataagtaccactccagtgtgtattcacttccaccagatccagaccacttcgatgggtacaagcagcaagtagtcacagtcatggatgacctgtgtcagaatcctgatggaaaggacatgtcactattctgtcaaatggtgtctactgtggattttattccaccgatggcctctcttgaagagaaaggagtttcttttacatccaaatttgttattgcgtctactaacgctagcaacatcattgtgccaacggtatctgactctgacgctattcgccgcagattttatatggattgtgacatcgaagtgacagattcatacaaaactgatttgggcagattggatgctggacgtgccgctagattgtgctcagagaataacactgcaaattttaaacgctgcagtccactagtgtgcgggaaagctattcaacttagggacagaaagtccaaggtcagatatagtgtggacacagtagtttctgaactcatcagggaacacaacaacaggtctgctattggcaatacaattgaagctttgttccaggggccccccaagttcagacccatcaggatt---agtcttgaagagaaaccagccccagacgctatcagtgatcttctcgctagtgtggatagtgaggaagtgcgtcaatattgt-agagaccaaggttggatcatccccgaaacccccaccaatgtcgagcgccatctcaatagggcagtattagttatgcagtctatcgctactgtagtggcagttgtttcactggtttatgttatctacaagttgtttgcaggatttcaaggtgcatactctggtgcccccaagcaaactctcaagaaaccagttctccgtacagcaacagtgcagggacctagccttgactttgccctctcactattgaggaggaacatcaggcaagttcaaacagaccaagggcacttcaccatgctgggtatcagagatcgcttggctgtcctcccgcgacatgcacagcctgggaagacaatctgggtggaacacaagcttgtgaatgtcttggatgctgttgagttggtggacgagcaaggagttaatttggagctgaccctagtcactcttgataccaatgagaagtttagggatgttaccaaattcataccagaaagcatcagtgccgctagtgacgccacccttgtgattaacacagagcacatgccttccatgtttgtaccagtaggtgatgtcgtgcaatacggctttctgaacctcagtggaaagcctacccaccgtactatgatgtacaacttccctactaaggcaggccagtgcggtggtgtggtcacttcggtaggtaagattattggcattcatatcggtgggaatggacgccaagggttctgcgctggcctgaaaagaggttactttgcaagcgagcaaggggagatccaatgggtgaagccaaacaaggaaactggtaggttaaacattagcggtcctacccgcacgaaacttgagcctagtgtgttttatgatgtgtttgaaggtaacaaagagccagctgtccttactagtagagatcctaggttggaggtggactttgagcaagccctgttttctaaatatgtagggaatgtgttacatgagcctgacgaatacgtgactcaggctgcactacactatgctaatcaattaaagcagctagacatcaataccagtaagatgagcatggaagaagcatgttacggtacagataaccttgaggccattgacctccataccagcgccggttatccatacagtgcactgggaatcaagaaaagggacatccttgacccagttactagagatgtcactaagatgaagttctacatggacaaatatggtttagatctaccctactctacttatgtaaaagatgagcttaggtcactagacaagattaagaaagggaagtcccgtttaattgaggccagcagtctaaacgattctgtttatcttagaatgacttttggtcacctgtatgaagtgtttcatgcaaacccggggacagtaaccggctcagcagtgggctgcaatccggacgtgttctggagtaaactcccaatcctactccctgggtcgctctttgcatttgattactcaggatatgatgctagtctcagccctgtgtggtttagagctctggaggtggtcctgcgggaaattggttactcagaggaagcagtgtccctcatagaaggaattaatcacactcatcatgtgtatcgcaacaagacctattgcgttcttggtgggatgccatcaggctgctcaggcacctccattttcaactcaatgatcaacaacataataatcagaacgctattgatcaaaacattcagagggatagacctagatgagctgaatatggtggcttacggggatgatgtgttggccagttacccttttcccattgattgtcttgagttggcaagaacaggtaaggagtatgggttaactatgacaccagctgataaatcaccttgctttaatgaagtcacttgggaaaatgccaccttcctaaagagagggttcttgcccgatcatcagttccctttcctcattcatcccacgatgcctatgaaggaaatccacgagtcaatacgctggacaaaggatgcacgaaacactcaagatcacgtgcgttccctatgcttattggcatggcacaacgggaaggatgaatatgaaaagtttgtaagtgcaatcagatcagtcccgattgggaaagcactagcaataccaaattttgagaacctgagaaggaattggcttgaattatttt---a-aactacagctt-------------------------ta-g---------------ctgaaccc-caccggga----atctggt------c-a-----cgttatt-g-acct--------ggtggggtttccagcc-cc-ctg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB550334.1_Human_enterovirus_71_genomic_RNA_complete_genome_strain:_SK-EV006-org
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-g-tggcgctagcactctgattctacggaatctttgtgcgcct-g-ttttaca---a----cc---c----ccc-c-----aattt-gcaacttagaagc------------aatacacaacact-gatcaa-cagcaggcatggcgcaccagccatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaagcgtccgttatccgaytaactacttcgagaaacc-tagtagcaccattgaagctgcggagtgtttcgctcggca--ctt-ccccc---gtgtagatcaggccgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaaccca-gaggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaatcaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctataacc-accctcaactttatattaactctcaatacagtcaaa-----catgggctcacaagtgtctactcagcgatccggctcccacgagaactccaattcagctacgg-aaggctctaccattaattacactaccatcaactattacaaagactcctatgctgcaacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggatattttcactgaaatggctgcgccactgaagtctccatccgctgaagcttgtggttatagtgatcgtgtggcacaactcaccattggaaactccaccattactacacaggaggcggcaaacatcatagtcggttatggtgagtggccctcatattgctctgatgacgatgctacagcggtggataaaccaacgcgcccagatgtgtcagtgaataggttttatacattggacaccaaactgtgggaaaaat------------------catctaaggggtggtattggaagtttcctgatgtattgactgagaccggagtctttggccagaacgcacagtttcactatttatatagatcagggttttgcattcatgtgcaatgtaatgctagcaagttccatcaaggagcgctgttagtcgctattcttccagagtatgttatagggacagtggcaggcggcacaggtacag------aggacagccaccctccttacaaacaaacgcaacctggcgctgatggttttgagctgcagcacccgtacgtgctcgatgctgggattcctatatcacaactgacggtgtgcccccatcaatggattaatctgcggaccaataactgtgccacgataatagtgccatatatgaacacactgcctttcgactctgccctgaaccattgcaattttgggctgttggtagtgcccattagcccattagattttgaccaaggggcaactccggttatccctattacaatcactctagctccaatgtgctctgagtttgcaggtctcagacaggcagttactcaaggcttccctactgagccaaaaccaggaacaaatcaatttttgaccaccgatgacggcgtctcagcacccattctaccaaatttccaccccactccatgtattcacatacccggtgaagtcagaaacctgcttgagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctaccagtttg------atggaaaggctacgattcccagtgtctgcgcaagcgg------ggaaaggtgaattgtgtgccgtgtttagggccgaccctggaagggacggtccatggcaatcaacaatgctgggccagctgtgtggatactacacccagtggtcagggtcactggaggtcacttttatgtttaccgggtcttttatggccacgggtaaaatgctcatagcctatacacctcctggtggccccttacctaaagaccgggccacagcaatgctgggcacgcatgttatctgggattttgggttacaatcatctgttacccttgtgataccatggatcagtaacacccactacagagcgcatgcccgggacggagtgttcgattactataccacaggactggtcagtatctggtatcaaacaaactacgtagttccaattggggcacccaatacagcttacataatagcactagcggcagcccagaagaactttaccatgaaactgtgcaaagacactagtcacatattacagacagcctccattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagatagtgtgagtagagcacttacccaggccctgccagca--------cccacaggtcaaaacacacaggtgagcagtcatcgactagacactggcgaagttccagcgcttcaagctgctgaaattggggcatcgtcaaatactagtgatgagagtatgattgaaacacggtgcgttcttaactcacacagcacagcagaaaccaccttggatagcttcttcagtagggcaggtttggtaggggagatagatctccctcttgagggcactac-taatccgaatggttatgccaattgggatatagacataactggttacgcacagatgcgcaggaaagtggagttgttcacctacatgcgctttgatgcggaattcacttttgttgcgtgcactcccaccggcggggttgttccacaattactccagtatatgtttgttccccctggtgctcccaaaccagaatctagagaatcacttgcttggcaaacagccacaaacccctcagtttttgtcaagttgactgatcccccagcacaggtctcagttccattcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccctacgtttggagaacataaacaggagaaagaccttgaatatggagcgtgtcctaataacatgatgggcactttctcggtgcgaactgtggggtcattaaagtccaagtaccctctggttgtcagaatatatatgagaatgaagcatgtcagggcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccgaactacgctggcaa----ctccattaaaccgaccggcactagccgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccagcaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataatgactgggcgaatctcgtctgggaagacagctcccgcgacctactagtgtcgtctaccactgcccagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactctaagagaaagcactatccagtcagcttctctaaacctagcctcatttatgtggaagctagcgagtattaccctgctagataccagtctcatctcatgcttgcggcgggccattctgaaccaggagattgtggtggcatccttaggtgccagcacggtgttgtcggcattgtgtccactggtggcaatgggcttgttggctttgcagatgtcagggatctcctatggttggatgaagaagcaatggagcagggtgtgtccgactacattaag-ggacttggtgatgcgtttggaactggcttcaccgatgcagtttccagagaagttgaggctcttaagaaccaccttattgggtctgagggagctgtcgagaagatcctaaagaatttgatcaaattaatctctgctttagtcatcgtgattaggagtgattatgacatggtcactctcacagcaactttagctctgatagggtgccacggtagtccctgggcatggattaaagcaaaaacagcttccattctaggcatccctattgcccagaagcaaagtgcgtcctggcttaaaaagtttaacgatatggccaacgccgccaaggggttagagtggatctccagtaagattagtaaattcatcgattggctcaaagagaaaatcataccagcggctagggagaaggtggagtttctgaacaacttaaaacagttgccg-ttgttggagaatcagatctcaaatctagagcagtctgctgcttcacaagaagatcttgaagccatgttcggaaatgtgtcgtacctagctca---------cttctgccgcaaattccaaccactgtacgctgcagaagccaaaagggtctatgctttggagaaaagaatgaacaactacatgcagttcaagagcaaacaccgaattgaacctgtatgtcttattattaggggttctccgggcaccgggaaatcactagcaactggcatcattgctcgggcaatagcagacaagtatcactcaagtgtgtactcactcccaccagacccggatcactttgatggatacaaacagcaggtggtcacggtcatggatgacttatgtcagaaccctgatggcaaagatatgtcattgttctgccagatggtgtccacagtggatttcatcccaccaatggcttccctagaagagaaaggagtttctttcacatctaaatttgtcattgcatctaccaattccagcaacatcatagtaccaacagtgtctgattctgatgcaattcgccgtaggttctatatggattgtgatatcgaagtcacggattcatataaaacggacttgggtaggttagatgctgggcgagccgccaaattgtgctctgagaataacacagcaaatttcaagcgttgtagcccactagtgtgtgggaaggccattcagctgagagatagaaagtccaaggtcaggtacagtgtggacacggtggtttctgagctcataagggaatacaacaacaggtctgytattggtaacacaattgaagcactattccaaggtccgcctaagtttagacccataaggatc---agtcttgaagaaaagccagccccagacgccattagtgaccttcttgctagtgtggatagcgaggaggtacgccagtactgt-agagatcaaggttggatcataccagagactcctacaaatgttgaacggcacctcaacagagctgtgctagtcatgcaatccatcgctacagttgtggcagtcgtttcactggtgtatgtcatctacaagctcttcgctggattccaaggcgcgtactctggtgctcccaagcagatactcaagaaacccgttctccgcacggcaacagtacagggtccaagtctcgatttcgctctgtctctactgaggaggaatatcaggcaagtgcaaacagatcaaggacatttcaccatgctgggtgtcagggaccgtttggctgttcttccacgccactcccagcccggcaaaacaatctgggtagagcacaaactcgtaaacattctggacgctgttgaactggtggatgaacaaggggttaatttggagctaaccctaatcacccttgacactaatgagaaattcagagacattactaagttcatcccagagagcatcagygctgcaagcgatgctaccctagtgatcaacacagagcacatgccctcaatgtttgtgccggtgggagacgttgtgcaatatggttttctcaacctcagtggaaagccaacccaccgtaccatgatgtacaactttcccaccaaggcagggcagtgtggaggggtggtgacatcagttggaaaggtcattggtatacacataggtggtaacggcagacaaggtttctgtgcgggacttaagaggagctacttcgccagcgagcaaggagagatccagtgggtcaagcccaataaagaaactgggagactcaacatcaatgggccaactcgcactaagctcgaacccagtgtatttcatgatgtttttgagggaaacaaggagccagcagttctacacagtaaagatccccgcctcgaggtggattttgagcaggctttgttctccaagtacgtagggaacacactatatgagcctgatgagtacattaaggaggcagctcttcactatgcaaatcagttgaaacagctagacattgacacctcccagatgagcatggaggaagcctgttacggcactgagaaccttgaggccattgatcttcacactagtgcaggctacccatacagtgctctaggaataaagaaaagagacatcctagattctactactagggatgtgagcaagatgaaattttatatggacaagtatggcttggaccttccctactccacctatgtcaaggatgagctacgctcgatagataagatcaagaaggggaagtctcgtttgattgaagctagcagcttaaatgattctgtgtaccttaggatgacttttgggcacctttatgaaaccttccatgcaaaccctggaactgtgaccggctcagccgtgggatgcaatccggatacattctggagtaaactacccatcttactccctggctcactctttgctttcgactattcaggatatgatgctagtcttagccctgtctggttcagagcattggaattagttcttagggaaataggctacagtgaggaagcagtttcacttgttgaggggatcaatcacacacaccatgtataccgcaacaaaacttactgtgtgcttggtggcatgccctctggttgctcaggaacatccatattcaattcaatgatcaataacattattattagagcactgctcatcaaaacgttcaagggcattgatttagacgagctcaacatggttgcctacggggatgatgtgcttgccagttacccttttccaattgactgtttggagttggcaagaacaggcaaggagtacggtttaaccatgactcctgcagacaaatccccatgcttcaatgaagtcaattgggataacgcaacctttctcaaaagaggcttcttgcccgatgaacaatttccattccttatccaccctaccatgccaatgaaagaaatccacgagtccatacggtggaccaaggacgcgcgaaatacccaagatcacgtgcggtccttgtgccttctggcatggcacaatggtaagcaggaatatgaaaagtttgtgagcgcaattagatcagtaccagtaggaaaagcattggctattccaaattatgagaatctgagacgcaattggctcgaactattct--ag-aggttaagtat-------------------------atac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>DQ341354.1_Human_enterovirus_71_isolate_3799-SIN-98_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-g-tggcgctagcactctgattctacggaatctttgtgcgcct-g-ttttaca---a---ccc---c----tcc-c-----aattt-gcaacttagaagc------------aatacacaacact-gatcaa-cagcaggcatggcgcaccagccatgtcttga-tcaagcacttctgttttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaagcgtccgttatccggctaactacttcgagaaacc-tagtagcaccattgaagctgcggagtgtttcgctcggca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaaccca-gaggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttacattggctgcttatggtgacaatcaca-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattata-----taccta----tttgtt-ggctttgtaccac-----taacctt--------------aaaatctataacc-accctcaactttatattaactctcaatacagtcaaa-----catgggctcacaagtgtctactcagcgatccggctcccacgagaactccaattcagctacgg-aaggctctaccattaattacactaccatcaactactacaaagactcctatgctgcaacagcaggcaaacagagcctcaaacaagaccctgataagtttgctaaccctgtcaaggacattttcactgaaatggctgcgccactgaagtctccatccgctgaagcttgtggttatagtgatcgcgtggcacaactcaccattggaaactccaccattactacacaggaggcggcaaacatcatagtcggttatggtgagtggccctcatattgctctgatgacgatgctacagcggtggataaaccaacgcgcccagatgtgtcagtgaataggttttatacattagacaccaaactgtgggaaaaat------------------catctaaggggtggtattggaagtttcctgatgtattgactgagaccggagtctttggccagaatgcacagtttcactatttatatagatcagggttttgcattcatgtgcaatgtaatgctagcaagttccatcaaggagcgctgttagtcgctattcttccagagtatgttatagggacagtggcaggcggcacaggtacag------aggacagccaccctccttacaaacaaacgcaacctggcgctgatggctttgagctgcagcacccgtacgtgctcgatgctgggattcctatatcacaactgacggtgtgcccccatcaatggattaatctgcggaccaataactgtgccacgataatagtgccatatatgaacacactgccttttgactctgccctgaaccattgcaattttggactgttggtagtgcccattagcccattagattttgaccaaggggcaactccggttatccctattacaatcactttggctccaatgtgctctgagtttgcaggtctcagacaggcagtcactcaaggtttccctactgagccaaaaccaggaacaaatcaatttttgaccaccgatgacggcgtctcagcacccattctaccaaatttccaccccactccatgtattcacatacccggtgaagtcagaaacctgcttgagttgtgtcaagtggagactattcttgaggttaacaa----------cgtacccaccaatgctaccagtttg------atggaaaggctacgattcccagtgtccgcgcaagcgg------ggaaaggtgaattgtgtgccgtgtttagggccgaccctggaagggacggcccatggcaatcaacaatgctgggccagctgtgtgggtactacacccagtggtcagggtcactggaggtcactttcatgtttaccgggtcttttatggccacgggtaaaatgctcatagcctatacacctcctggtggtcccttacctaaagaccgggccacagcaatgctgggcacgcatgttatctgggattttgggttacaatcatctgtcacccttgtgataccatggatcagtaacactcactacagagcgcatgcccgagacggagtgttcgattactataccacaggactggtcagtatctggtatcaaacaaactacgtagttccaattggggcacccaacacagcttacataatagcactagcggcagcccagaagaactttaccatgaaactgtgcaaagacactagtcacatattacagacagcctccattcagggagatagg--------gtggcagatgtgatcg---agagctctat--------------------------aggagatagtgtgagtagagcacttacccaggccctgccagca--------cccacaggtcaaaacacacaggtaagcagtcatcgactagacactggcgaagttccagcgcttcaagctgctgaaattggggcatcctcaaatactagtgatgagagtatgattgaaacacggtgcgtacttaactcacacagtacagcagaaaccaccttggatagcttcttcagtagggcaggtttggtaggggagatagatctccctcttgagggcactac-taacccgaatggttatgccaactgggatatagacataactggttacgcacagatgcgcaggaaagtggagttgttcacctacatgcgctttgatgcggaattcacttttgttgcgtgcactcccaccggccaggttgttccacaattactccagtatatgtttgttccccctggtgctcctaaaccagaatctagagaatcacttgcttggcaaacagccacaaacccctcagtttttgtcaagttgactgatcccccagcccaggtctcagttccattcatgtcacccgcgagcgcttaccagtggttttacgacgggtaccctacgtttggagaacataaacaggagaaagaccttgaatatggagcgtgtcctaataatatgatgggcactttctcggtgcgaactgtggggtcatcaaagtccaagtaccctctggttgttagaatatatatgagaatgaagcatgtcagggcatggatacctcgcccgatgcgcaaccaaaactacttgttcaaagccaatccgaactacgctggcaa----ctccatcaaaccgaccggcactagccgtactgccat---tactac---------------------------------------ccttgga------------------------------------------aagttcggccaacaatctggggccatctacgtgggcaacttcagagtggttaatcgtcacctcgctactcataatgactgggcgaatctcgtctgggaagacagctcccgcgacctactagtgtcgtctaccactgcccagggctgtgatacaattgcacgttgtgactgtcaaacaggagtgtactattgtaactctaggagaaagcactatccagtcagcttctctaaacctagcctcatttatgtggaagctagcgagtattaccctgctagataccagtctcatctcatgcttgcggcgggccattctgaaccaggagattgtggtggcatccttaggtgccagcacggtgttgtcggcattgtgtccactggtggcaacgggcttgttggctttgcagatgtcagggatctcctatggttggatgaagaagctatggagcagggtgtgtccgactacattaag-ggacttggtgatgcgtttggaactggcttcaccgatgcagtatccagagaagttgaggctcttaagaaccaccttattgggtctgagggagctgtcgagaagatcctaaagaatttgatcaaattaatctctgctttagtcatcgtgattaggagtgattatgacatggtcactctcacagcaactttagctctgatagggtgccacggtagtccctgggcatggattaaagcaaaaacagcttccattctaggtattcctattgcccagaagcaaagtgcgtcctggcttaaaaaatttaacgatatggccaacgccgccaaggggttagagtggatctccagtaagattagtaaattcatcgattggctcaaagagaaaatcataccagcggctagggagaaggtggagtttctgaacaacttaaaacagttaccg-ttgttggaaaatcagatctcaaatctagagcagtctgctgcttcacaagaagatcttgaagccatgttcggaaatgtgtcgtacctagctca---------cttctgccgcaagttccaaccactgtacgctacagaagccaaaagggtctatgctttggagaaaagaatgaacaactacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcattattaggggttctccgggcactgggaaatcactagcaactggcatcattgcacgggcaatagcagacaagtatcactcaagtgtgtactcactcccaccagacccggatcactttgatggatacaaacagcaggtggtcacggtcatggacgacttatgtcagaaccctgacggcaaagatatgtcattgttctgccagatggtgtccacagtggatttcatcccaccaatggcttccctagaagagaaaggagtttctttcacatctaaatttgtcattgcatctaccaattccagcaacatcatagtaccaacagtgtctgattctgatgcaattcgccgtaggttctatatggattgtgatatcgaagtcacggattcatataaaacggacttgggtaggttagatgctgggcgagccgccaaattgtgctctgagaataacacagcaaatttcaagcgctgtagcccactagtgtgtgggaaggccattcagctgagagatagaaagtccaaggtcaggtacagtgtggacacggtggtttctgagctcataagggaatacaacaacaggtctgctattggtaacacaattgaagcactattccaaggtccgcctaagtttagacccataaggatc---agtcttgaagaaaagccagccccagacgccattagtgaccttcttgctagtgtggatagcgaggaggtacgccagtactgt-agagatcaaggttggatcataccagagactcccacaaatgttgaacggcacctcaacagagctgtgctagtcatgcaatccatcgctacagttgtggcagtcgtttcactggtgtatgtcatctacaagctcttcgctggattccaaggcgcgtactctggtgctcctaagcagatactcaagaaacccgttctccgcacggcaacagtacagggtccaagtctcgatttcgctctgtctctactgaggaggaatatcagacaagtgcaaacagatcaaggacatttcaccatgctgggtgttagggaccgtttggctgttcttccacgtcactcccagcccggcaaaacaatttgggtagagcacaaactcgtaaacattctggacgctgttgaactggtggacgaacaaggggttaacttggagctaaccctaatcacccttgacactaatgagaaattcagagacattactaagttcatcccagagagcatcagcgctgcaagcgatgctaccctagtgatcaacacagagcacatgccctcaatgtttgtgccggtgggagacgttgtgcaatatggttttctcaacctcagtggaaagccaacccaccgtaccatgatgtacaactttcccaccaaggcagggcagtgtggaggggtggtgacatcagttggaaaggtcattggtatacacataggtggtaacggcagacaaggtttctgtgcgggacttaagaggagctatttcgccagcgagcaaggagagatccagtgggtcaagcccaataaagaaactgggagactcaacatcaatgggccaactcgcactaagctcgaacccagtgtatttcatgatgtttttgagggaaacaaggagccagcagttctacacagtaaagatccccgccttgaggtggattttgagcaggctttgttctccaagtacgtggggaatacactatatgagcctgatgagtacattaaggaggcagctcttcactatgcaaatcagttgaaacagctagacattgacacctcccagatgagcatggaggaagcctgttacggcactgagaaccttgaggccattgatcttcacactagtgcaggctacccatacagtgctctaggaataaagaaaagagacatcctagattctactactagggatgtgagtaagatgaaattttatatggacaagtatggcttggaccttccctactccacttatgtcaaggatgagctacgctcgatagataagatcaagaaggggaagtctcgtttgattgaagccagcagcttaaatgattctgtgtaccttagaatgacctttgggcacctttatgaaaccttccatgcaaaccctggaactgtgaccggctcagccgtgggatgcaatccggatacattctggagtaaactacccatcttactccctggctcactctttgctttcgactattcaggatatgatgctagtcttagccctgtctggttcagggcattggaattagttcttagggaaataggctacagtgaggaagcagtttcacttgttgaggggatcaatcacacacaccatgtataccgcaacaaaacttactgtgtgcttggtggcatgccctctggttgctcaggaacatccatattcaattcaatgatcaataacattattattagagcactgctcatcaaaacgttcaagggcattgatttagacgagctcaacatggttgcctacggggatgacgtgcttgccagttacccttttccaattgactgtttggagttggcaagaacaggcaaggagtacggtttaaccatgactcctgcagacaaatccccatgtttcaatgaagtcaattgggataacgcaacctttctcaaaagaggcttcttgcccgatgaacaatttccattccttatccaccctaccatgccaatgaaagaaatccacgagtccatacggtggaccaaggacgcgcgaaacacccaagatcacgtgcggtccttgtgccttctggcatggcacaatggtaaacaggaatatgaaaagtttgtgagcgcaattagatcagtaccagtaggaaaagcattggctattccaaattatgaaaatctgagacgcaattggctcgaactattct--ag-aggttaagtat-------------------------gtac---------------ctcaaccc-caccagga----atctggt------c-g-----ttaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX139462.1_Enterovirus_A71_isolate_Jena_15-984_polyprotein_gene_complete_cds
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------caagcacttctg-tttccccggactgagtatcaatagactgc-ttacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaact-tagtaacaccatcgaagctgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggccgatgagtcaccgca-atccccacgggcgaccgtggcggtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgccctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacataccctcaagcca-gaggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttactgtggctgcttatggtgacaattcaa-------gaattgttaccatatagctattggattggccatccag--tgtctaacagagctattgtg-----tactta----tttgtt-gggtacgttccat-----tatctta--------------cacatcccttaac-acattacattttattgtgaagctaaatacaagaaga-------tgggctcgcaggtgtctacgcaacgctccggctcgcatgaaaattcaaactcagctactg-agggttccaccataaactacaccaccattaattactacaaggactcctatgccgctacagcaggcaaacagagccttaaacaagatccagataaatttgcaaatcctgtcaaagatatcttcactgaaatggcagcaccactaaagtctccatctgctgaggcatgtgggtacagcgatcgagtagcacaattaactattggcaattccaccattaccacacaagaagcggcaaacattatagttggctatggtgagtggccctcctactgctctgattctgacgctacagcagtggataaaccaacgcgcccagatgtctcagtgaataggttctacacattagacactaaattgtgggaaaaat------------------catccaagggatggtattggaaatttccggatgtactaacagaaactggggtttttggtcagaatgcacaatttcactacctctaccgatcagggttttgcattcacgtgcagtgcaatgctagtaaattccatcaaggagcactcctagttgccgtcctcccggagtacgtcatcggaacagtggcgggtggcacagggacag------aagacagtcaccccccttacaagcaaacccaacccggtgccgacggattcgagctgcagcacccgtatgtactcgatgccggcgttccaatatcacaactaacagtatgcccacatcagtggattaacttgaggaccaacaattgtgccactataatagtaccatacataaacgcactgcccttcgattctgctttgaaccattgcaattttggtctactggttgtacctattagtccgttggacttcgaccaaggagcgacaccagtgatccccatcactatcacattagccccaatgtgctctgaattcgcgggtctcaggcaagcagtcacacaagggttccctaccgaattgaaacctggcacaaaccaatttctgaccactgacgatggtgtttcagcacccatcctgccgaactttcaccccaccccatgtattcatatacccggggaagtcaggaatttgctggagctgtgtcaggtggagaccattttagaagtcaacaa----------tgtacccacaaatgccaccagtcta------atggagagactgcgctttccggtctcggctcaagcag------gaaagggcgagttgtgtgcagtgttcagagccgaccctggacgagatggaccatggcaatctaccttgttgggtcagctgtgcgggtactatactcaatggtcagggtcactggaagtcacatttatgtttactgggtcctttatggctactggcaagatgcttatagcctacacaccaccagggggccctctacccaaagatcgagcgaccgctatgctgggcacgcacgttatatgggatttcgggctgcaatcgtctgttacccttgtaataccatggattagcaacacccactacagagcacatgctcgagatggagtatttgactattacaccacaggcttggtcagtatatggtatcagacaaactatgtggttccaatcggggcacccaacacagcctacataatagcactagcagcagcccagaaaaatttcaccatgaaattgtgcaaggactctagtgacatcttacagacaggtactatccagggagataga--------gtggcagatgtgattg---aaagctctat--------------------------aggagatagcatgagcagagccctcactcaagctttaccagca--------cctacaggccagaatacgcaagtaagcagccaccgattggacactggcaaagttccagcacttcaagccgctgagattggagcatcatcaaatgctagtgacgagagtatgattgagacacggtgtgttctcaattcacacagcacagctgagactactctcgatagtttctttagcagggcggggttagttggggagatagatctccctctagagggcacaac-gaacccaaacggttatgctaactgggacatagacataactggttacgcacaaatgcggaggaaggtggaactgttcacctacatgcgttttgacgcagagttcaccttcgttgcatgcacaccaaccggggaggttgtcccacaactgctccaatacatgtttgtgccacctggggctcccaaaccagattccagggagtcccttgcatggcaaactgccaccaatccctcagtttttgttaagttgtcagatcccccagcacaggtctcagttccgttcatgtcacctgcaagcgcctatcagtggttctacgacggataccccacgttcggtgagcacaagcaggagaaggaccttgaatacggggcatgtccaaacaacatgatgggcacgttctcagtgcggactgtgggaacctcgaaatccaagtaccctttggtgattaggatttacatgaggatgaagcatgtcagagcgtgggtacctcgcccgatgcgcaaccagaactatctactcaaagccaacccaaattacgccggcaa----ctccatcaagccaactggaaccagtcgcacggcaat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatccggggctatttatgtgggtaattttagggtggtcaaccgccaccttgccacccacaatgattgggcaaaccttgtttgggaggacagctctcgcgacttgctagtgtcatccaccaccgctcagggttgtgacacaattgcccgctgtaattgtcagacaggggtgtattattgcaactcgaggagaaagcactatccggtcagcttttcaaagcccagcttgatctacgtggaggccagtgagtattacctggctagatatcagtcacacctcatgcttgcagtaggtcattcagaaccaggagactgcggcggaattctcaggtgccaacatggagtcgtaggcattgtctctactggaggcaatggtctggttgggtttgccgatgtcagagatcttctgtggcttgatgaggaggctatggaacagggtgtgtccgactacattaaa-ggactcggagatgcttttggcacggggttcactgatgcagtgtctagagaggtggaagccctaaagaatcatctgattggttccgaaggagcggtggaaaagattttaaagaatctagtgaagcttatttcagccctagtcatagtcatcaggagcgattatgatatggtcacccttactgcaacccttgccctgattgggtgccacggaagcccgtgggcgtggataaaatcaaagacagcttccatcttgggcatccctatggcgcagaagcaaagcgcatcttggctgaagaaattcaatgacatggcaaatgccgcaaaggggctagagtggatctctaataaaatcagtaaatttattgattggctcaaggagaaaattatcccagccgctaaggagaaagttgagttcctaagcaatcttaagcagttacct-ttactagagaaccaaatttccaaccttgagcagtccgccgcctcacaggaggaccttgaagctatgtttgggaacgtgtcatatttagccca---------cttctgtcgcaaattccagccactctatgcaactgaagcaaagagagtctatgctttggagaaaagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattattagagggtcaccaggaacgggcaagtcactggctaccggcatcattgctagagccattgctgataaataccactctagtgtgtactcactaccaccagatccagaccattttgacgggtacaagcagcaagtagtgacagtcatggacgatctgtgtcaaaaccccgatggtaaggatatgtcattgttttgtcaaatggtgtccaccgttgacttcatccctccaatggcatcgctagaagagaaaggggtgtcttttgcttcaaaatttgtcattgcctcaactaatgctagcaacatcattgtccccacggtctcggattctgatgctattcggagaaggttcttcatggattgtgacattgaagtgactgactcctataaaacggatcttggccgattggatgcaggtagggctgccaaactttgctcagaaaataacactgctaattttaagaggtgcagtccgctagtgtgtggcaaggccattcagttgagagacaggaagtctaaagttagatatagtgttgatactgtggtgtcagagctgatcagggagtacaacaacaggtctgctataggtaacaccatagaagctctgtttcaaggaccgcccaaatttagacccattagaatc---agtcttgaggaaaagcctgccccagatgccattagcgacttacttgctagtgttgatagtgaggaggtgcgacaatactgt-agggatcagggatggataattccagaaacaccaaccaatgtagagcgacaccttaatagagcagtgttggtgatgcagtccattgccactgtggttgcagtcgtgtctctcgtttacgttatttacaagctgtttgctggctttcaaggtgcatactctggagtacccaaacagactctcaagaagcccgtgctcagaacagccactgttcagggacccagcctggacttcgccctgtctcttctgaggcgtaacatcagacaggttcaaactgaccagggacatttcaccatgcttggagtgcgcgaccgccttgctgtgctaccacgacactcgcaaccagggaagaccatctggattgaacataagttagtcaatgtgctggatgcagtcgagctggtagatgagcagggtgtcaacttggaactcacgctagtaacgttagacaccaatgagaagtttagagacatcaccaagttcattccagagagcatcagtggtgcaagtgatgcaactttagtgattaacactgagcacatgccatcaatgttcgtcccagtgggggatgttgtacagtatggattcctgaacctcagtggcaaaccaacccatagaacaatgatgtacaacttcccgacgaaagctgggcaatgtgggggcgtggtcacatcagttggaaaaatcattggcattcacattggtggcaatgggcgccagggcttctgcgctagcctgaagagaggttacttcgctagcgagcaaggtgagatccagtgggtgaaacctaacaaggagactggaagacttaacatcaatggtccgacccgcactaagcttgaacccagtgtgttccatgatgtgtttgaaggcaacaaagaaccagcagtcttgcacagcaaagatcctcgccttgaagtggattttgagcaagcactgttctccaagtacgtggggaatacgctacatgagcctgatgagtacattagagaggcagctttacactatgcaaatcagctgaagcaactagaaatagacacctctcaaatgagcatggaggaagcttgctatggtacagacaaccttgaggccattgaccttcacaccagcgcaggttacccatacagtgctttgggaattaagaagagggacatcttggatcctactaccagggatgtgagtaagatgaaattctacatggacaagtatggccttgacctcccctactccacttatgttaaagatgagctacgctcaatggacaagatcaagaaggggaagtcccgcttgattgaagccagcagtttgaatgactcagtttaccttagaatggcttttggacacctctatgaaacattccatgcgaaccctgggactgtgactggttcagcagtggggtgtaacccagatgtgttttggagcaaattgccaatcctgcttcctggctccctcttcgcttttgactactcaggctacgatgccagcctcagtccagcctggtttagggcactggagctagttctcagagagataggttacagtgaggaggcagtctcacttattgagggaatcaaccatacacaccatgtgtatcgcaataaaacctattgtgtacttggtgggatgccttcaggttgctcaggcacatccatcttcaactcaatgattaacaatatcatcatcagagcattgctcattaaaacatttaaaggtattgatttggatgaactcaatatggttgcctacggggatgatgtgcttgccagctacccatttccgattgactgtctagaattagcaaaaacaggcaaagagtatggcctaaccatgactcctgcagacaagtctccttgctttaatgaagttaattgggagaacgcaaccttccttaagaggggtttcttgcctgatgaacaattcccatttttaatacacccaaccatgccaatgaaggagatccatgagtctatccggtggactaaggacgcacgcaacacacaagatcatgtgcgatccttatgcttgttggcatggcacaacggtaagcaagaatatgagaaatttgtgagcacaattagatctgtcccagtaggaaaggcattagcaattccaaactatgaaaatctgagacgtaattggctcgaattgtttt-----agaggccaaac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaa------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU641502.1_Enterovirus_A71_strain_45849/BE/DE_2015_polyprotein_gene_complete_cds
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tccccggactgagtatcaatagactgc-ttacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaact-tagtaacaccgtcgaagctgcagggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggccgatgagtcaccgca-atccccacgggcgaccgtggcggtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgccctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacataccctcaagcca-gaggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttactgtggctgcttatggtgacaattcaa-------gaattgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtg-----tactta----tttgtt-gggtacgttccat-----tatctta--------------cacatcccttaac-acattacattttattgtgaagctaaatacaagaaga-------tgggctcgcaggtgtctacgcaacgctccggctcgcatgaaaattcaaactcagctactg-agggttccaccataaactacaccaccattaattactacaaggactcctatgccgctacagcaggcaaacagagccttaaacaagatccagataaatttgcaaatcctgtcaaagatatctttactgaaatggcagcaccactaaagtctccatctgctgaggcatgtgggtacagcgatcgagtagcacaattaactattggcaattccaccattaccacacaagaagcggcaaacattatagttggctatggtgagtggccctcctactgctctgattctgacgctacagcagtggataaaccaacgcgcccagatgtctcagtgaataggttctacacattagacactaaattgtgggaaaaat------------------catccaagggatggtattggaaatttccggatgtgctaacagaaactggggtttttggtcagaatgcacaatttcactacctctaccgatcagggttttgcattcacgtgcagtgcaatgctagtaaattccatcaaggagcactcctagttgccgtcctcccggagtacgtcatcggaacagtggcgggtggcacagggacag------aagacagtcaccccccttacaagcaaacccaacccggtgccgacggattcgagctgcagcacccgtatgtactcgatgccggcgttccaatatcacaactaacagtatgcccacatcagtggattaacttgaggaccaacaattgtgccactataatagtaccatacataaacgcactgcccttcgattctgctttgaaccattgcaattttggtctactggttgtacctattagtccgttggacttcgaccaaggagcgacaccagtgatccccatcactatcacattagccccaatgtgctctgaattcgcgggtctcaggcaagcagtcacacaagggttccctaccgaattgaaacctggcacaaaccaatttctgaccactgacgatggtgtttcagcacccatcctgccgaactttcaccccaccccatgtattcatatacccggggaagtcaggaatttgctggagctgtgtcaggtggagaccattttagaagtcaacaa----------tgtacccacaaatgccaccagtcta------atggagagactgcgctttccggtctcggctcaagcag------gaaagggcgagttgtgtgcagtgttcagagccgaccctggacgagatggaccatggcaatctaccttgttgggtcagctgtgcgggtactatactcaatggtcagggtcactggaagtcacatttatgtttactgggtcctttatggctactggcaagatgcttatagcctacacaccaccagggggtcctctacccaaagatcgagcgaccgctatgctgggcacgcacgttatatgggacttcgggctgcaatcgtctgttacccttgtaataccatggattagcaacacccactacagagcacatgctcgagatggagtgtttgactattacaccacaggcttggtcagtatatggtatcagacaaactatgtggttccaatcggggcacccaacacagcctacataatagcactagcagcagcccagaaaaatttcaccatgaaattgtgcaaggactctagtgacatcttacagacaggtactatccagggagataga--------gtggcagatgtgattg---aaagctctat--------------------------aggagatagcatgagcagagccctcactcaagctttaccagca--------cctacaggccagaatacgcaagtaagcagccaccgattggacactggcaaagttccagcacttcaagccgctgagattggagcatcatcaaatgctagtgacgagagtatgattgagacacggtgtgttctcaattcacacagcacagctgagactactctcgatagtttctttagcagggcggggttagttggggagatagatctccctctagagggcacaac-gaacccaaacggttatgctaactgggacatagacataactggttacgcacaaatgcggaggaaggtggaactgttcacctacatgcgttttgacgcagagttcaccttcgttgcatgcacaccaaccggggaggttgtcccacaactgctccaatacatgtttgtgccacctggggctcccaaaccagattccagggagtcccttgcatggcaaactgccaccaatccctcagtttttgttaagttgtcagatcccccagcacaggtctcagttccgttcatgtcacctgcaagcgcctatcagtggttctacgacggataccccacgttcggtgagcacaagcaggagaaagaccttgaatacggggcatgtccaaacaacatgatgggcacgttctcagtgcggactgtgggaacctcgaaatccaagtaccctttggtgattaggatttacatgaggatgaagcatgtcagagcgtgggtacctcgcccgatgcgcaaccagaactatctattcaaagccaacccaaattacgccggcaa----ctccatcaagccaactggaaccagtcgcacggcaat---cactac---------------------------------------tcttggg------------------------------------------aaatttggacaacaatccggggctatttatgtgggtaattttagggtggtcaaccgccaccttgccacccacaatgattgggcaaaccttgtttgggaggacagctctcgcgacttgctagtgtcatccaccaccgctcagggttgtgacacaattgcccgctgtaattgtcagacaggggtgtattattgcaactcgaggagaaagcactatccggtcagcttttcaaagcccagcttgatctacgtggaggccagtgagtattacccggctagatatcagtcacacctcatgcttgcagtaggtcattcagaaccaggagactgcggcggaattctcaggtgccaacatggagtcgtaggcattgtctctactggaggcaatggtctggttgggtttgccgatgtcagagatcttctgtggcttgatgaggaggctatggaacagggtgtgtccgactacattaaa-ggactcggagatgcttttggcacggggttcactgatgcagtgtctagagaggtggaagccctaaagaatcatctgattggttccgaaggagcggtggaaaagattttaaagaatctagtgaagcttatttcagccctagtcatagtcatcaggagcgattatgatatggtcacccttactgcaacccttgccctgattgggtgccacggaagcccgtgggcgtggataaaatcaaagacagcttccatcttgggcatccctatggcgcagaagcaaagcgcatcttggctgaagaaattcaatgacatggcaaatgccgcaaaggggctagagtggatctctaataaaatcagtaaatttattgattggctcaaggagaaaattatcccagccgctaaggagaaagttgagttcctaagcaatcttaagcagttacct-ctactagagaaccaaatttccaaccttgagcagtccgccgcctcacaggaggaccttgaagctatgtttgggaacgtgtcatatttagccca---------cttctgtcgcaaattccagccactctatgcaactgaagcaaagagagtctatgctttggagaaaagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattattagagggtcaccaggaacgggcaagtcactggctaccggcatcattgctagagccattgctgataaataccactctagtgtgtactcactaccaccagatccagaccattttgacgggtacaagcagcaagtagtgacagtcatggacgatctgtgtcaaaaccccgatggtaaggatatgtcattgttttgtcaaatggtgtccaccgttgacttcatccctccaatggcatcgctagaagagaaaggggtgtcttttgcttcaaaatttgtcattgcctcaactaatgctagcaacatcattgtccccacggtctcggattctgatgctattcggagaaggttcttcatggattgtgacattgaagtgactgactcctataaaacggatcttggccgattggatgcaggtagggctgccaaactttgctcagaaaataacactgctaattttaagaggtgcagtccgctagtgtgtggcaaggccattcagttgagagacaggaagtctaaagttagatatagtgttgatactgtggtgtcagagctgatcagggagtacaacaacaggtctgctataggtaacaccatagaagctctgtttcaaggaccgcccaaatttagacccattagaatc---agtcttgaggaaaagcctgccccagatgccattagcgacttacttgctagtgttgatagtgaggaggtgcgacaatactgt-agggatcagggatggataattccagaaacaccaaccaatgtagagcgacaccttaatagagcagtgttggtgatgcagtccattgccactgtggttgcagtcgtgtctctcgtttacgttatttacaagctgtttgctggctttcaaggtgcatactctggagtacccaaacagactctcaagaagcccgtgctcagaacggccactgttcagggacccagcctggacttcgccctgtctcttctgaggcgtaacatcagacaggttcaaactgaccagggacatttcaccatgcttggagtgcgcgaccgccttgctgtgctaccacgacactcgcaaccagggaagaccatctggattgaacataagttagtcaatgtgctggatgcagtcgagctggtagatgagcagggtgtcaacttggaactcacgctagtaacgttagacaccaatgagaaatttagagacatcaccaagttcattccagagagcatcagtggtgcaagtgatgcaactttagtgattaacactgagcacatgccatcaatgttcgtcccagtgggggatgttgtacagtatggattcctgaacctcagtggcaaaccaacccatagaacaatgatgtacaacttcccgacgaaagctgggcaatgtgggggcgtggtcacatcagttggaaaaatcattggcattcacattggtggcaatgggcgccagggcttctgcgctagcctgaagagaggttacttcgctagcgagcaaggtgagatccagtgggtgaaacctaacaaggagactggaagacttaacatcaatggtccgacccgcactaagcttgaacccagtgtgttccatgatgtgtttgaaggcaacaaagaaccagcagtcttgcacagcaaagatcctcgccttgaagtggattttgagcaagcactgttctccaagtacgtggggaatacgctacatgagcctgatgagtacattagagaggcagctttacactatgcaaatcagctgaagcaactagaaatagacacctctcaaatgagcatggaggaagcttgctatggtacagacaaccttgaggccattgaccttcacaccagcgcaggttacccatacagtgctttgggaattaagaagagggacatcttggatcctactaccagggatgtgagtaagatgaaattctacatggacaagtatggccttgacctcccctactccacttatgttaaagatgagctacgctcaatggacaagatcaagaaggggaagtcccgcttgattgaagccagcagtttgaatgactcagtttaccttagaatggcttttgggcacctctatgaaacattccatgcgaaccctgggactgtgactggttcagcagtggggtgtaacccagatgtgttttggagcaaattgccaatcctgcttcctggctccctcttcgcttttgactactcaggctacgatgccagcctcagtccagcctggtttagggcactggagctagttctcagagagataggttacagtgaggaggcagtctcacttattgagggaatcaaccatacacaccatgtgtatcgcaataaaacctattgtgtacttggtgggatgccttcaggttgctcaggcacatccatcttcaactcaatgattaacaatatcatcatcagagcattgctcattaaaacatttaaaggtattgatttggatgaactcaatatggttgcctacggggatgatgtgcttgccagctacccatttccgattgactgtctagaattagcaaaaacaggcaaagagtatggcctaaccatgactcctgcagacaagtctccttgctttaatgaagttaattgggagaacgcaaccttccttaagaggggtttcttgcctgatgaacaattcccatttttaatacacccaaccatgccaatgaaggagatccatgagtctatccggtggactaaggacgcacgcaacacacaagatcatgtgcgatccttatgcttgttggcatggcacaacggtaagcaagaatatgagaaatttgtgagcacaattagatctgtcccagtaggaaaggcattagcaattccaaactatgaaaatctgagacgtaattggctcgaattgtttt-----agaggccaaac-------------------------atag---------------ct----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF501389.1_Enterovirus_A71_isolate_EV71/wuhan/3018/2010_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagtacactggtatctcggtacccttgtacgcct-g-ttttata------cccc---c---tccc-t-----gattt-gcaacttagaag--------------caacgcaaacca-gatcaa-tagtaggtgtgacataccagtcgcatcttga-tcaagcacttctg-tatccccggaccgagtatcaatagactgt-gcacacggttgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagcaacgccattgaagttgcagagtgtttcgctcagca--ctc-ccccc---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaatacggacatggcgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatacccttaatcca-aaggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttgtattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccag--tgtcaaacagagctatcgta-----tatctc----tttgtt-ggattcacacctc-----tcactct--------------tgaaacgttacac-accctcaattacattatactgctgaacacg---aagc----gatgggctcccaggtctccacacagcgatccggctcgcatgagaattccaactcagccacgg-aaggctccactataaattacacaaccattaattactacaaagactcgtatgctgccactgctggaaagcaaagtctcaaacaagatcctgacaagtttgcgaaccctgtgaaggacatctttactgaaatggcagcgcccttaaagtctccctctgctgaagcatgtggctatagcgaccgagtggcacagcttaccattggaaattccaccattactacacaagaagcagcaaacataatagttgggtatggtgagtggccttcatactgctctgataatgatgcaacagcggtagacaaacctacacggcctgatgtctcagtaaatagattttacacgctagacactaagctatgggagaaat------------------catccaaggggtggtactggaagttcccagatgtactgactgaaaccggagtttttggtcaaaatgcacaatttcactacttataccgttcagggttctgcatccacgttcaatgtaacgctagcaaatttcaccaaggggcgctactcgttgcggtattgcccgagtatgtcattggaacagtggcaggcggcacaggcacag------agaacagtcaccctccttatatacaaacccaacccggcgctgatggatttgaattacaacatccatatgttcttgatgctggaattccaatatctcagttgacagtgtgccctcaccagtggatcaatttacgaaccaacaattgtgccaccataatagtgccatacatgaacacactaccttttgattccgcattgaaccactgtaatttcggactattggtggtgcctatcagcccgctggatttcgaccaaggggcgacaccggtaattcctatcactatcacgttggctccgatgtgttctgagtttgcgggtctcaggcaggcagttacgcagggttttcccactgaattgaaacctggcactaatcagttcttaaccacggatgatggtgtgtcagcacctatattgccaaatttccaccccaccccgtgcattcacatacctggcgaggttagaaacttactagaactgtgccaggtagaaaccattttagaagtcaacaa----------tgtgcccaccaacgcaaccagtttg------atggaaaggctacggtttccagtgtcagcccaagcag------ggaaaggtgagttgtgtgcagtgttcagggccgaccctgggagggatggtccttggcaatccaccacgctaggccagttgtgtggatattacacccaatggtcagggtctttggaagtcacttttatgttcaccggatcctttatggcaactggtaaaatgcttatagcttacacacccccagggggccctttgcctaaagatagagccacagctatgctggggacgcacgtcatctgggactttggcttgcaatcgtccgtcaccctcgtcataccatggatcagtaacactcactatagggcgcatgctcgagatggggtgtttgattactacaccacaggtttggttagtatatggtaccaaacaaattatgtagtccctattggagcacctaatactgcctatataatagcgttggcagcagcccaaaagaatttcactatgaaattgtgcaaggacaccagtgacattttgcaaacggccactattcaaggggacaga--------gtggcagatgtgattg---agagctctat--------------------------aggagatagtgtgagtaaggccctcacccaagctttacctgca--------cccacaggccaaaacacccaagtgagcagtcatcgcttagacactggaaaagtaccagcacttcaagccgccgaaatcggagcttcgtcgaatgctagtgatgagagtatgattgagactcggtgtgttcttaactcacatagcacagctgaaaccacccttgatagtttcttcagcagagcaggcttagttggggagatagatcttcctctaaagggcaccac-caatccgaacgggtatgccaactgggacgtagacataaccggtcatgcgcagatgcgcagaaaagtggaactattcacctatatgcgctttgacgcagagttcacttttgtcgcgtgcacacctaccggagaggtcgttccacagctgcttcaatacatgtttgttccacccggggcccccaaaccagactccagagactctttggcttggcaaacggccacgaacccctcagtttttgtcaaattatccgacccaccagcacaagtctcagtgccattcatgtcacctgcaagcgcataccaatggttttatgacggataccctacatttggagagcacaagcaagagaaggatctcgagtatggggcatgcccgaataacatgatgggcacattctcagtgcggactgtgggatcgtcaaagtcaaaatatcccttagtcatcagaatatacatgagaatgaagcacgtcagagcgtggatacctcggccgatgcgcaatcagaactatttgttcaaatccaacccaaactatgctggtaa----ttccattaaaccaactggtaccagccgaacggcaat---cactac---------------------------------------gctcggg------------------------------------------aaattcggtcagcagtctggggctatttatgtgggcaactttagggtagtaaacagacacctagccacccatactgactgggccaacttggtgtgggaagacagctctagagacctcctagtttcttcaactaccgctcaagggtgtgacaccattgctcgatgtaactgccaaaccggagtatattactgtaactctcgcagaaaacactatccagtcagtttttcgaaacctagtttggtgtttgtagaagctagtgagtattatccagctagatatcagtcccatcttacgcttgctgagggccattcagaacctggtgattgtggcggtattcttagatgccgacacggtgtggtgggaattgtctccactggcggaagtggccttgtgggatttgctgacgttagagatcttctgtggctagatgaggaagcgatggagcagggggtatctgattacatcaaa-ggtctcggtgatgccttcggcacaggtttcactgacgcagtgtctagggaagtggaagcgttgaagaaccacttaatcggctccgaaggggctgttgagaagatcttgaagaacttggtgaagctaatttcagccttagttatagtcatcagaagtgattatgatatggtcaccctcacagccacactagctctgatcgggtgccacgggagtccttgggcgtggatcaaatcaaagacagcttccatactgggcattcccatggcacaaaaacagagtgcctcatggctaaagaagttcaatgacatggcaaatgctgcaaaagggcttgagtggatttccaacaagatcagtaagttcattgactggcttaaagagaagatcattccagctgccaaagagaaagttgagtttttgaacaacctaaaacagctcccc-ttgttggagaaccaggtctccaatcttgaacagtctgctgcctcacaagaagacttagaagctatgtttggtaatgtgtcatatctggctca---------cttttgccgcaaattccaaccactctacgcaactgaggccaagagagtctacgctttagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcatcagaggttccccaggaacgggcaaatcgctcgccacaggcattatagctagagccattgctgacaagtatcgctctagtgtatactcactccccccagacccagatcactttgatgggtataagcaacaggtggtcacggtcatggatgatctctgccagaacccggacggaaaagacatgtccctattttgtcaaatggtttctacagtagattttataccacccatggcatcactagaggagaaaggagtgtccttcacctctaagtttgtcattgcatcgaccaatgctagtaacatcatagtccccacagtttcagattcagatgcaattcgcaggcgattctatatggactgcgatatagaagtgacagattcttacaagacagacctcggtcggctggacgcaggtagagctgccaagctttgtacagaaaataacactgctaatttcaagagatgcagcccactggtgtgtggtaaggctattcagctgagagacaggaagtccaaagtgagatatagcgtcgacaccgtggtatcggaactgatcagagagtacaacaatagatctgctattgggaatactatagaagcactctttcaaggaccccctaaattcaggcctataagaatt---agtctcgaagaaaagccagccccagatgccattagtgatttgctcgctagtgtcgatagcgaggaggtccgacagtactgc-agggaacaagggtggataatcccggaaacaccaactaatgtggaacgtcacctcaatagagcagtattggtaatgcagtccatcgccactgtggttgcagttgtgtctcttgtttatgtcatttataagctgtttgccgggttccagggtgcttactctggagcgcccaagcaaattctcaagaagcccgtgttaagaacagccacggtccaagggcccagcttagacttcgccttgtctcttttgaggcgcaacattagacaagcgcaaactgaccaaggacacttcaccatgctaggagtgcgagatcgcctagccatcctgccgcgccactcgcaaccagggaagaccatctgggtagagcataaattaatcaatgtactagatgcagttgagttggtggatgagcaaggtgtaaacttggaactcacactggtaactttggacaccaatgaaaaatttagggatatcaccaagtttatcccagaagtgatcaccggggcgagtgacgcaactctagtcatcaacactgagcacatgccctcaatgtttgtgccggtgggtgacgttgtgcagtacgggtttctgaaccttagtggtaaacccacacacagaaccatgatgtataacttccccacgaaggcaggacagtgtgggggggtggttacctcagttggtaagatcattggaatccacattggcgggaatggacgccagggcttttgcgctggcctaaagaggagttattttgccagcgagcaaggagagatccagtggatgaagcctaacagagaaaccgggaggttgaatattaatggtccaacccgaactaagctggaacccagtgtattccatgatgtgttcgagggcaacaaggaaccagcggtcctgactagtaaggaccccagacttgaggttgattttgagcaagctttgttctccaagtatgtgggtaacaccctgcatgaacctgatgagtacgtgacacaggctgctctccactacgcaaatcagctgaagcaactggacatcaacaccagcaagatgagcatggaagaagcgtgctatggcacagaatatttagaagctatagacttgcacaccagtgctggatacccttatagtgctttgggcatcaagaaaagagacatcctcgacccagttaccagagacacctccaggatgaagttatatatggataagtatgggttggacttgccttattccacttatgtaaaggatgagcttagatctctagataagatcagaaaagggaagtctcgcctgattgaggctagcagcttaaatgattctgtctaccttagaatgacttttggacacctttatgaagtgtttcacgccaacccagggactgtaacaggatctgcagttgggtgcaaccctgatgtattttggagcaagttaccaattttgttaccgggttcactctttgcatttgactactcaggatatgatgcaagccttagtcctgtgtggttcagagctctagagttggttctgagagagatcggttactcggaggaggctgtgtcactcatagaagggatcaatcacacccaccacgtgtaccgaaacaagacatattgtgtacttggtggaatgccctcaggctgctccggtacttccattttcaattccatgattaacaacataatcatcagaaccctcctgattaaaacattcaaaggtatagacttagatgagctgaaaatggtagcttatggagatgacgtgttggccagctacccgtttcctattgattgcttggaattggctaaaacaggcaaagaatatgggctgactatgactcctgctgataaatcaccttgtttcaatgaggttacctgggagaatgcaaccttcttaaaacgcggttttctaccggaccatcagttcccttttctgatccatcccactatgcccatgagggaaatccatgagtccatccgctggaccaaggacgcgcgcaatactcaagatcatgtgcgctccctttgtctcctggcatggcataatggaaaagaggagtatgagaaatttgtgagtacaattagatcagtccccattggaagggctttagcaataccaaattttgagaacttgagaagaaattggctcgagttatttt--aa-acttacagctc-------------------------aatg---------------ctgaaccc-caccagaa----atctggt------c-g-----tgtcaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU254597.1_Coxsackievirus_A16_isolate_BJ14-3_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-ccccacccaca-gggcccac-t-gggcgctagcacactggttctgcgggacctttgtgcgcct-g-ttttgca-----accct---t----ccc-t-----aagca-gtaacttagaagc------------tttgcacaatcat-ggccaa-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcagagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgag-------aagttgttgccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----ttcatt-ggattcgtccctc-----tcaatct--------------caaggtcattcaa-actctcaattgcatattgctccttaa--ctataaga-----aatggggtcgcaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggatcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgttatggatgttatacatgagatggccccaccgctaaagtctccaagcgctgaggcgtgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagtcatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacccgatgtatcagtgaacagatttttcacgttggacactaaatcttgggccaagg------------------attcaaagggttggtactggaaattccctgatgttttgacagaggtaggtgtttttggtcaaaatgctcagttccactacctgtatcgatctgggttctgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggtgctctactagtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccaccacacagcctggtcaggttggtgcagttttgacacacccttacgtgctagacgcagggatccctttaagccaattaactgtgtgcccgcaccagtggattaacttaagaactaataactgtgcaaccattatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggcctactggtcatcccagtggtgccattagatttcaacacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcaggtctgcgccaggcggtaaagcaaggaataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtctccgcaccaattttgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagttaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgtttcccagtgtcagtacagagta------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggcccgtggcagtctacaatactaggtcaactctgcagatactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggttcatttatggccacgggaaaaatgctcatcgcctacaccccacctggggggaatgtgcctgcggacagaatcacagcgatgctaggaacacacgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcggcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagacatgattg---accaaactgt--------------------------aaacaatcaagtgaaccgctccttaactgcgatgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaagagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttaatgggatatgctcagctacggcggaaatgcgagttattcacctacatgcgctttgacgctgaattcacatttgtcgtagccaaacccaatggtgcgttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacatccagagattcgtttgcttggcagacagccaccaacccatctgtgttcgtgaaaatgacggaccctccagctcaagtgtcagtccccttcatgtcaccagctagtgcatatcaatggttttatgatggttatcccacctttggtgagcacctccaagcaaatgatctagattatggccaatgcccgaataatatgatgggtacttttagcattaggacagtagggactgagaagtcaccacactccattgctctgagggtatatatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccgaattataaaggaaa----tgacattaagtgtaccagcaccagtagagacaagat---aacaac---------------------------------------actggga------------------------------------------aagtttggacagcaatcgggcgccatatacgtgggcaattatagggtggtgaaccgacaccttgccacacacaacgactggacaaaccttgtgtgggaggacagctccagggacctgttagtttcctccaccaccgctcaggggtgcgacaccatcgctaggtgcaattgtcaaaccggcgtgtactattgcaactccaagaggaaacactacccggttagcttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcagtcccatcttatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcagatgccagcatggtgtggtaggaattgtttccactggtggaaatggtcttgtggggtttgctgatgtcagagaccttctatggctggatgaagaagcaatggagcagggagtgtctgattatatcaaa-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaatcatctaattggctcagaaggagctgttgagaagatcttgaagaatttggtgaagctgatctcggctttagtcatagttgttaggagtgactatgacatggtcaccctcacggctacgctagccctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggcattcccattgtgcagaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggctcgagtggatttctagcaaaatcagcaagttcattgactggcttaaagagaagattattccggccgctaaagagaaagttgaattcctaaacaacctgaaacagcttcct-ttgttggagaaccaaatctcaaaccttgaacagtctgctgcctcgcaagaagatctagaagctatgtttggcaatgtttcatatttagccca---------cttctgccgcaagttccagccactctatgcggttgaagccaaaagggtttacgccctagagaaaaagatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaaatcacttgccacgggtattattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcaccgttatggatgatctctgtcaaaacccagatggaaaggatatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtccttcacctctaagtttgttatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcaattcgcaggcgattttatatggactgcgatatagaggtgacagactcttacaagacggacctcggccgactcgacgcaggcagggccgctaagctttgcacagaaaataacactgctaattttaagagatgcagcccattagtgtgtggcaaagccattcaattaagagacaggaaatctaaagtgagatatagtattgacactgtggtgtcagagttaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagcgaggaggtccgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttagtgatgcagtccattgccaccgtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggcgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttggattttgccttatcccttctaaggcgcaatatcagacaggtgcaaactgaccaaggacatttcactatgctaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatctgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggcgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagaccatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctctatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgctgggctgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagcccaataaagaaactgggagactgaacattaatggtccaacacgcaccaaattagagcccagtgcgttctacgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcccagacttgaggttgattttgagcaggctttgttttccaaatatgtaggaaataccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccaactaaagcaattagatataaacactaataagatgagtatggaagaagcatgttacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagagatactaccaaaataaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaaggaaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactggatctgcagtagggtgtaatcctgatgtgttctggagtaaactaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaagtggtcctccgggagatcggctactcagaggaagctgtatcactaatagaagggatcaaccacactcatcatgtgtaccggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgataaaaacctttaaagggatcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagttatccattccctattgactgctcggagctagccagaactggtaaagagtatggcttaacaatgacacctgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcatcagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgctggactaaggacgcacgtaacactcaggaccacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcccattgggagagccttggctataccaaattttgagaatttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU254598.1_Coxsackievirus_A16_isolate_BJ14-4_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-ccccacccaca-gggcccac-t-gggcgctagcacactggttctgcgggacctttgtgcgcct-g-ttttata-----accct---t----ccc-t-----aagca-gtaacttagaagc------------tttgcacaattat-ggccaa-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tgtccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcactctcaaccca-ggggg-cggcgcgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgag-------aagttgttgccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----ttcatt-ggattcgtccctc-----tcaatct--------------caaggtcattcaa-actctcaattgcatattgctccttaa--ctataaga-----aatggggtcgcaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggatcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgttatggatgttatacatgagatggccccaccgctaaagtctccaagcgctgaggcgtgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagtcatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacccgatgtatcagtgaacagatttttcacgttggacactaaatcttgggccaagg------------------attcaaagggttggtactggaaattccctgatgttttgacagaggtaggtgtttttggtcaaaatgctcagttccactacctgtatcgatctgggttctgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggtgctctactagtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccaccacacagcctggtcaggttggtgcagttttgacacacccttacgtgctagacgcagggatccctttaagccaattaactgtgtgcccgcaccagtggattaacttaagaactaataactgtgcaaccattatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggcctactggtcatcccagtggtgccattagatttcaacacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcaggtctgcgccaggcggtaaagcaaggaataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtctccgcaccaattttgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagttaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgtttcccagtgtcagtacagagta------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggcccgtggcagtctacaatactaggtcaactctgcagatactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggttcatttatggccacgggaaaaatgctcatcgcctacaccccacctggggggaatgtgcctgcggacagaatcacagcgatgctaggaacacacgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcggcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagacatgattg---accaaactgt--------------------------aaacaatcaagtgaaccgctccttaactgcgatgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcatcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaagagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttaatgggatatgctcagctgcggcggaaatgcgagttattcacctacatgcgctttgacgctgaattcacatttgtcgtagccaaacccaatggtgtgttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagacagccaccaacccatctgtgtttgtgaaaatgacggaccccccagctcaagtgtcagtccccttcatgtcaccagctagtgcatatcaatggttttatgatggttatcccacctttggtgaacacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatatatgagaatcaaacacgttagggcatggatcccaagacctctgagaaatcagccctatttgtttaagaccaacccgaattataaaggaaa----tgacattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------actggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactacagggtggtgaatcgacaccttgccacacacaacgactggacaaaccttgtgtgggaggatagctctagggacttgttagtctcctccaccaccgctcaggggtgcgacaccatcgctaggtgcaattgtcaaaccggtgtgtactattgcagctccaaaaggaaacactacccggttagcttcaccaagcccagtctgatatttgtggaagctagcgagtattacccagctagatatcagtcccatcttatgcttgctgtgggtcactcagaacctggtgactgtggtggcatcctcagatgccagcatggtgtggtaggaattgtttctactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggagcagggagtgtctgactatatcaaa-ggcctgggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatctaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagttgttaggagtgactatgacatggtcaccctcacggctacgctagccctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggcattcccattgtgcagaaacagagcgcttcatggctaaagaagtttaatgatatggccaatgctgcgaaagggctcgagtggatttctagtaaaatcagcaagttcattgactggcttaaagagaagattattccggccgctaaagagaaagttgaattcctaaacaacctgaaacagcttccc-ttgttggagaaccaaatctcaaaccttgaacagtctgctgcctcgcaagaagatctagaagctatgtttggtaatgtgtcgtatttagccca---------cttctgccgcaagttccagccactttatgcggttgaagccaaaagggtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcatcagaggctccccaggaacaggtaaatcacttgctacgggtatcattgctagagctattgctgacaaatatcactctagcgtttactcactccctccagacccagaccattttgatggatacaaacaacaagtagtcaccgttatggatgatctctgtcaaaacccagatggaaaggatatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtccttcacctctaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggacctcggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccattagtgtgtggtaaggccattcaattaagagacaggaaatctaaagtgagatacagtattgacactgtggtgtcagagttaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagcgaggaggtccgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttagtgatgcagtccattgccaccgtggttgcggttgtgtctctcgtctatatcatttataaattgtttgctggatttcaaggcgcctattctggtgcacctaagcaaactctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttggactttgccttatcccttctaaggcgcaatatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagaccgcctagccattttgccgcgccactcgcaaccaggaaaaactatctgggtggagcacaaattaattaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttataccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctctatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaagattattgagattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagcccaataaagaaactgggagactgaacattaatggtccaacacgtaccaaattggagcccagtgcattctacgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcccagacttgaggttgattttgagcaggctttgttttccaaatatgtgggaaataccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccaactaaagcaattagatataaacactaataagatgagtatggaagaagcatgctacggcactgaatatctggaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgatccaaccactagagatactaccaaaatgaaattttacatggataaatatgggttagacttaccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcacaccaacccggggactgtgactggatccgcagtagggtgtaatcctgatgtgttctggagtaaactaccgatcctgctgccaggatcgctcttcgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaagtggttctccgagagatcggctactcagaggaagctgtatcactaatagaagggatcaaccatacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccttcaggttgttccggcacttctatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagttatccattccctattgactgctcggagctagccagaactggtaaagagtatggcttaacaatgacacctgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcatcagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgctggactaaggacgcacgcaacactcaggaccacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcctattgggagagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289411.1_Coxsackievirus_A16_isolate_CV-A16/P10/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccactcaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggccgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccacccgg--tgtctaacagagctattgtt-----tatcta----ttcatt-ggattcgtccctc-----ttaatct--------------caaggccattcaa-actctcgattacatattgctccttaa--ttgtaaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggatcgaccataaattacacaactataaactactacaaagatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaagtttactgaccctgtcatggatgttatacatgagatggccccaccgctaaagtctccaagcgctgaggcgtgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagtcatagcctatggggaatggcctgagtactgcccagacacggatgcaacggcagtcgacaaacccactcgacctgacgtgtcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtaggtgtttttggtcaaaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggtgctctactagtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccaccacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttaagccaattaactgtgtgcccacaccagtggattaacttaagaactaacaattgtgcaactattatagttccatatatgaacacagttccttttgactcagctctcaaccactgtaactttggtctactggtcatcccagtggtgccattagatttcaacacaggtgccacatctgagattcccattacagtcactatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtctccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtagagaccattctggaagttaataa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgtttcccagtgtcggtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggcccgtggcagtctacaatactaggtcaactctgcaggtactacacacagtggtcaggttcactggaggtgacattcatgttcgcaggttcattcatggccacaggaaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcagacagaatcacagcgatgctaggaacacatgtgatctgggacttcgggttgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcggcagctcaggataacttcaccatgaaactgtgcaaggatactgaggacattgagcaaacggctaacatacaaggggatccc--------attgcggacatgattg---accaaactgt--------------------------aaacaatcaagtgaaccgctccttgactgcgatgcaagtacta--------cctacagctgccaacactgaggctagtagtcatagattaggtactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtctaacgctagtgacaagaatcttattgagactagatgtgtgttgaaccatcactccacgcaagagacagccattgggaatttctttagccgtgctggtcttgtcagtatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttaatgggatatgctcagctgcggcggaaatgcgagttattcacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccgccaggagctccgaaacctacttccagagattcgtttgcttggcagacagccaccaacccatctgtgttcgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcatatcaatggttttatgatggttatcccacctttggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatatatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaagat---aacgac---------------------------------------gctggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaattatagggtggtgaatcgacaccttgccacacataacgactggacaaaccttgtgtgggaggacagctctagggacttgttagtctcctccaccaccgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggtgtatattactgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagccagatatcagtcccatcttatgcttgctgtcggtcactcggaacctggtgactgtggtggcatcctcagatgccagcatggtgtggtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggagcagggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtatgggcttcactgacgcagtgtctagggaagtagaggcattgaagaaccatctaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagttgttaggagtgactatgacatggtcaccctcacggctacgttagccctgattgggtgtcacggaagcccttgggcgtggattaaagcgaagacagcctctattcttggcattcccatagtgcagaaacagagcgcttcatggctaaagaagttcaatgacatggccaacgccgcgaaagggctcgagtggatttctagtaaaatcagcaagttcattgactggcttaaagaaaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaagcagctcccc-ttgttggagaaccaaatctcaaacctggaacagtctgctgcctcgcaagaagatttagaagctatgtttggcaatgtgtcatatttagccca---------cttctgccgcaagttccaaccactttatgcggttgaagccaaaagggtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaattattagaggctccccaggaacaggcaaatcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctttgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttataagacggaccttggccgactcgacgcaggcagggccgccaagctttgcacagaaaacaacactgctaactttaagagatgcagcccattagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagttaatcagagagtataataatagatctgccattgggaacaccatagaagccctcttccaagggccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagcgacttacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaagggtgtataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccactgtggttgcggttgtgtctctcgtctatgtcatttataagttgtttgctgggtttcaaggtgcctattccggtgcacctaagcaaactctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttggactttgccttatcccttctaaggcgcaatatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatctgggtggagcacaaattaatcaatgtgttagatgctattgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgagaaatttagagatgtcaccaagtttattccagagacgattaccggggcaagcgatgcaaccttggtcatcaacactgagcacatgccctctatgttcgttccagtgggtgatgttgtacagtatgggtttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactgagcattaatggtccaacacgtaccaaattggagcccagtgcattctacgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcccagacttgaggttgattttgagcaagctttattttccaaatatgtaggaaataccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccaactaaagcaattagatataaacactaataagatgagtatggaagaagcatgctacggcactgaatatttagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccccctatgtgaaagatgagcttagatctttagataagattaagaaagggaaatcccgcttgattgaagccagcagtttaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattgccgattctgctgccaggttcgctctttgcatttgattattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaagtggttctccgagagatcggctactcagaggaagctgtatcactaatagaagggatcaaccatacccatcatgtgtatcggaacaggacatactgtgtcctcggtggaatgccttcaggttgttccggcacttctatcttcaattctatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcagagctagccagaactggtaaagagtatggattaacaatgacacctgctgacaagtcaccttgctttaatgaagtcacctgggaaaatgccacattcttaaagagaggcttcctgccagatcatcagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgctggactaaagacgcacgcaacactcaggaccacgtgcgctctctgtgcctcttagcgtggcacaatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattgggaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagctt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ746492.1_Coxsackievirus_A16_strain_L23_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-ccccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t--ccccc-t-----aagca-gtaacttagaagc------------tttgtacaaccat-ggccaa-tagtgggcgtggcgcaccagtcacgtcttgg-tcaagcatttctg-tatccccggactgagtatcaatagactgc-tcacgtggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacggacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cagcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--cgtctaacagagctattgtt-----taccta----ttcatt-ggattcgtccctc-----ttaatct--------------caaggccattcaa-actcttgactacatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccggatcacatgagaactcaaactctgcatcgg-agggatcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacacgagatggccccaccgctaaagtctccaagcgctgaggcgtgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagtcatagcctatggggagtggcccgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtaggtgtttttggtcaaaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttactagtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccaccacacagcctggtcaggttggtgcagttctgacgcacccttacgtgttagacgcagggatccctttgagccaattaactgtgtgcccgcatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcaacacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtctccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagttaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgttttccagtgtcggtacagagta------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggcccgtggcagtctacaatactaggtcaactctgcaggtactacacccaatggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggaaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggactgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgttgtacccattggtgcccccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgatgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcagagacaggggcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttgatgggatatgctcagctgcggcggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagacagccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtaggaactgagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------gctggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactggacaaaccttgtgtgggaggacagctctagggacttgttagtctcctccaccaccgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggagcagggagtgtctgattatatcaaa-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatctaattggctcagaaggagctgttgagaagatcttgaaaaacttggtgaagctaatctcggctttagtcatagttgttaggagtgactatgacatggtcaccctcacggctacgctagccctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctgaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctggtaaaatcagcaagttcattgactggcttaaggaaaagattattccggccgctaaagagaaagttgaattcttgaacaacctgaaacagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaagatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgccgcaagttccaaccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaaatcacttgccacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctaccgtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgacttgacgcaggcagggccgccaagctttgcacagaaaacaacactgctaactttaagagatgcagcccactagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagttaatcagagagtataataataggtctgctatcgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaaactctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttggacttcgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtgaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctctatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccagtggatgaagtccaataaagaaactgggagactgaacattaatggtccaacacgtaccaaattggagcccagtgcattctacgatgtgtttgagggtagcaaagaaccagcagtcttaaccagtaaggatcccagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaataccttgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctgaagcaattagatataaacattaataagatgagtatggaagaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagcctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaagtggttctccgagagatcggctactcagaggaagctgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggcacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagctagccagaactggtaaagagtatggattaacaatgacacctgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcatcagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--acatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aa---------------------------------------------------------------------------------------------------------
>KC755228.1_Coxsackievirus_A16_isolate_XZ10-D-1_polyprotein_gene_complete_cds
tgtacaaaaaagcaggctttaaaa--cag-cct-gtgggttg-t-ccccacccata-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gtaacttagaagc------------tttgtacaatcat-ggccaa-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaattacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctaattagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----ttcatt-ggattcgtccctc-----ttaatct--------------caaggccattcaa-actcttgattacatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggatcgaccataaattacacaactataaactactataaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctaaagtctccaagcgctgaggcgtgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacagcagtcgacaaacccactcgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtaggtgtttttggccaaaatgctcagttccattacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaagtttcaccaaggcgctttactagtggctgtgctgcctgagtatgtactcggtactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccaccacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcaacacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtctccgcaccaattctgccaggtttccatccaacaccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagttaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagta------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggcccgtggcagtctacaatactaggtcaactctgcagatactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggaaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggccttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcggtgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaagagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttgatgggatatgctcagctgcggcggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagacagccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccagtgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------gctggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactggacaaaccttgtgtgggaggacagttctagggacttgttagtctcctccaccaccgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagtaatggagcagggagtgtctgactatatcaag-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatctaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagttgttaggagtgactatgacatggtcaccctcacggctacgctagccctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgactggcttaaggaaaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaagatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgccgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaaatcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtccttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccactagtgtgtggtaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagttaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaccccccaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagggcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaaactctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttggactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaagggcatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctctatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagtggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaacaaagaaactgggagactgaacattaatggtccaacacgtaccaaattggagcccagtgcattctacgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcccagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaataccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagtatggaagaagcatgctacggcaccgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaagtggttctccgagagatcggctactcagaggaagctgtatcactaatagaagggatcaatcacacccatcatgtgtatcggaacaggacatattgtgtccttggcggaatgccttcaggttgttccggcacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagctagccagaactggtaaagagtatggattaacaatgacacctgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcatcagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaaggaattggctcgagttatttt--g--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaaaaa----------aa---------------------
>JX068833.1_Human_coxsackievirus_A16_strain_BJ08/07_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggacctttgtgcgcct-g-ttttata-----accct---t----ccc-t-----aagca-gtaacttagaagc------------tttgtacaatcat-ggccaa-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacggacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctggatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattagccatccgg--tgtctaacagagctattgtt-----taccta----ttcatt-ggattcgtccctc-----ttaatct--------------caaggccattcaa-actctcgattacatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccggcgatccgggtcacatgagaactcaaactctgcatcgg-agggatcgaccataaattatacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggatgttatacatgagatggccccaccgctaaagtctccaagcgctgaggcgtgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagtcatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtaggtgtttttggtcaaaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggtgctctactagtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccaccacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttaagccaattaactgtgtgcccacaccagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggtctactggtcatcccagtggtgccattagatttcaacacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtctccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcggagtggagaccattctggaagttaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgtttcccagtgtcggtacagagta------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggcccgtggcagtctacaatactaggtcaactctgcaggtaccacacccagtggtcaggttcactggaggtgacattcatgtttgcaggttcattcatggccacaggaaaaatgctcatcgcctacaccccgcctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagacatgattg---accaaactgt--------------------------aaacaatcaagtgaaccgctccttgactgcgatgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaagagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttaatgggatatgctcagctgcggcggaaatgcgagttattcacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcaaacagccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcatatcaatggttttatgatggttatcccacctttggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatatatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------gctggga------------------------------------------gagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactggacaaaccttgtgtgggaggacagctctagggacttgttagtctcctccaccaccgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcagtcccatcttatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcagatgccagcatggtgtggtaggaattgtctctactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggagcagggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatctaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagttgttaggagtgactatgacatggtcaccctcacggctacgctagccctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggcattcccatagtgcagaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggctcgagtggatttctagtaaaatcagcaagttcattgactggcttaaagaaaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ttgttggagaaccaaatctcaaaccttgaacagtctgctgcctcgcaagaagatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgccgcaagttccagccactctatgcggttgaagccaaaagggtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaaatcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggtcgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccattagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagttaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaaactctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttggactttgccttatcccttctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatctgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaatgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctctatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactgaacattaatggtccaacacgtaccaaattggagcccagtgcattctacgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcccagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaataccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccaactaaagcaattagatataaacactaataagatgagtatggaagaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagagatactaccaaaataaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaagtggttctccgagagatcggctactcagaggaagctgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggcacttctatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagctagccagaactggtaaagagtatggattaacaatgacacctgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcatcagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgctggactaaagacgcacgcaacactcaggaccacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatacgca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617101.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_B_CF187036_FRA_2010
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gcaacttagaagc------------cttgtacaatcac-gaccaa-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtaccaatagactgc-tcacgcggttgaaggggaaaacgttcgttacccggctaactacttcgagaaacc-tagtagtaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgcccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttatt-ggatacatccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattgctccttaa--ctgtagga-----aatggggtcacaagtttccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctaaagtctccaagcgccgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaagttccctgatgttttgacagaggtaggcgtttttggtcagaatgctcacttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagtcccttttgactcagctcttaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcaacacaggtgctacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaagcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagtcaataa----------cttaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccatggcagtccacaatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggctacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgttaggaacacatgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccaccggcattataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggacaacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cccacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcattgcaagccgcggagacaggggcatcgtctaatgctagtgataagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttcttcagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatctgatgggatatgctcagctgcgacggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagctagtgcttaccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagtattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaaccaaccttatttgttcaagaccaacccaaattataaagggaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgtgacaccatcgctaggtgcgattgtcaaactggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagccagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtggggattgtctccactggaggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggagcaaggagtgtctgactatatcaaa-ggcctcggtgacgctttcggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagggccatttaattggctcagaaggagctattgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ttgctggagaaccaaatctcaaatcttgaacagtctgctgcctcacaagaggatctagaagctatgtttggcaatgtgtcatatttagctca---------cttctgtcgcaagttccagccactctatgcggttgaggccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcgcttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctgttctgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaattttaagagatgcagcccgctagtgtgtggtaaggccattcaattaagagacaggaagtctaaagtgagatatagcattgatactgtggtgtcagagctaatcagagagtataacaataggtctgctattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---aaccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggatagttccagaaacatcaaccaatgtggaacgtcaccttaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctcttaaaaagcctgtactaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacattaggcaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacgaaggcagggcagtgtggaggtgtggttacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgccggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactaaacattaatggtccaacacgtaccaaattggagcccagtgcattttatgatgtgtttgggggcagcaaagaaccagcagtcttaaccagtaaggatcctagacttgaggttgattttgagcaagctttgttttccaaatatgtgggaaacaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcagttagatataaacattaacaagatgagtatggaggaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgctctgggtgtcaagaaaagggacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagatcaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttagaggtggtcctccgagagatcggctactcagaggaggccgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgttcttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaacatggtagcttatggagatgatgtgttagctagttatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccctgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaagatcacgtgcgctctctgtgccacttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC507895.1_Human_coxsackievirus_A16_strain_YY157_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccactcaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtaccaatagactgc-tcacgcggttgaaggggaaaacgttcgttacccggctaactacttcgagaaacc-tagtagtaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttaacagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcgggaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtc-----taccta----ttcatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattgctccttaa--ctgtagga-----aatggggtcacaagtgtccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctaaagtctccaagcgccgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagatgcagatgcaacggcagtcgacaaacccactcgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaagttccctgatgttttgacagaggtaggcgtttttggtcagaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttgagccaattgactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaatacagtcccttttgactcagctcttaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcgacacaggtgctacatctgaaattcccatcacagtcaccgtagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagtcaataa----------cttaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgttcgcaggctcattcacggctacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgttaggaacacatgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcattataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcgttgcgagccgcggagacaggggcatcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttcttcagccgtgctggtcttgtcagcattatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatctgatgggatatgctcagctgcgacggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcttaccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatggtgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaaccaaccttatttgttcaagaccaacccaaattataaaggaaa----tgatattaagtgctccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggtaactatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttggtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaactggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagccagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtggggattgtctccactggaggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggagcaaggagtgtctgactatatcaaa-gccctcggtgacgctttcggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagagccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatacttagccca---------cttctgtcgcgagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctgttctgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccgctagtgtgtggtaaggccattcaattaagagacaggaagtctaaagtgagatatagcattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaacccctaagttcaggcctataagaatt---aaccttgaagaaaagccggcccctgatgccatcagtgacttacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcaccttaacagagcagtgctggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggcaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggttacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgccggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactaaacattaatggtccaacacgtaccaaattggagcccagtgcattttatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaagatcctagacttgaggttgattttgagcaagctttgttttccaaatatgtgggaaacaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcagttagatataaacattaacaagatgagtatggaggaagcacgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgctctgggtgtcaagaaaagggacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagatcaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgagagatcggctactcagaggaggccgtatcactaatagaagggattaaccacacccatcatgtgtatcggaacaggacatattgtgttcttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttaattaaaacgtttaaggggatcgatttagatgagctgaacgtggtagcttatggagatgatgtgttagctagttatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccctgctttaatgaagttacctgggaaaatgccacattcttagagagaggcttcctgccagatcaccagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaaaa----------------------------------
>KF055238.1_Coxsackievirus_A16_strain_CC024_complete_genome
-----------------------------------------------ccgcctaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtaccaatagactgc-tcacgcggttgaaggggaaaacgttcgttacccggctaactacttcgagaaacc-tagtagtaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttgtt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattgctccttaa--ctgtagga-----aatggggtcacaagtttccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggacatgtcccaagacccgaggaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctaaagtctccaagcgccgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgatgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------actcaaagggttggtattggaagttccctgatgttttgacagaggtaggcgtttttggtcagaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtactagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagtcccttttgactcagctcttaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcaacacaggtgctacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctagaagtcaataa----------cttaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggctacaggtaaaatgctcattgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgttaggaacacatgtgatctgggacttcggactgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgctcgcgctgggtactttgactattacaccactggcattataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cccacagctgccaacactgaggcaagtagtcatagattaggcactggtgttgtaccagcattgcaagccgcggagacaggggcatcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttcttcagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatctgatgggatatgctcagctgcgacgaaaatgcgagttatttacctacatgcgctttgatgccgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcttaccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaaccaaccctatttattcaagaccaacccaaattataaaggaaa----tgatattaggtgcaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaactggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagccagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtggggattgtctccactggaggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggagcaaggagtgtctgactatatcaaa-ggcctcggtgacgctttcggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagagccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaggttgaattcttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatttggccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcaccgttatggatgacctctgtcaaaacccagatggaaaggacatgtccctgttctgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaacattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaaaagatgcagcccgctagtgtgtggtaaggccattcaattaagagacaggaagtctaaagtgagatatagcattgacactgtggtgtcagagctaatcagagagtataataatagatctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---aaccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcaccttaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgggatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggttacttcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgccggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactaaacattaatggtccaacacgtaccaaattggagcccagtgcattttatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcctagacttgaggttgattttgagcaagctttgttttccaaatatgtgggaaacaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcagttagatataaacattaacaagatgagtatggaggaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgctctgggtgtcaagaaaagggacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttaggtccttagataagatcaagaaaggcaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgacagggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatacgatgcaagtctcagcccagtgtggtttagagctttagaggtggtcctccgagagatcggctactcagaggaggccgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgttcttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgaactgaacatggtagcttatggagatgatgtgttagctagttatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccctgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctaccagatcatcagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgaggagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaat--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX068830.1_Human_coxsackievirus_A16_strain_BJ11/03_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtaccaatagactgc-tcacgcggttgaaggggaaaacgttcgttacccggctaactacttcgagaaacc-tagtagtaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccgt--------ggggtaa-cccatgggacgctctagtacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgta-----taccta----tttgtt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattgctccttaa--ctgtagga-----aatggggtcacaagtttccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggacatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctaaagtctccaagcgccgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaggcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------actcaaagggttggtattggaagttccctgatgttttgacagaggtaggcgtttttggtcagaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggcgcagttctgacgcacccttacgtactagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagtcccttttgattcagctcttaaccactgcaactttggtctactggtcatcccggtggtgccattggatttcaacacaggtgctacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctagaagtcaataa----------cttaaagactaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggctacaggtaaaatgctcatcgcctacaccccacctgggggaaacgtgcctgcggacagaatcacagcaatgttaggaacacatgtgatctgggacttcggactgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacatgctcgcgctgggtactttgactattacaccactggcattataaccatatggtatcaaactaactatgtcgtacccattggtgctcctactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cccacagctgccaacactgaggcaagtagtcatagattaggcactggtgttgtaccagcactgcaagccgcggagacaggggcatcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttcttcagccgtgctggtcttgtcagcatcattacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatctgatgggatatgctcagctgcgacggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagttccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcttaccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgttagggcatggatcccaagacctctaagaaaccaaccctatttgttcaaaaccaacccaaattataaaggaaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccgtatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaatgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccattgctaggtgcaattgtcaaactggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagccagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtggggattgtctccactggaggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggagcaaggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagagccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcgtggctaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctaaagagaaggttgaattcttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccttagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccagggacaggtaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgacctctgtcaaaacccagatggaaaggacatgtccctgttctgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaacattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaaaagatgcagcccgctggtgtgtggtaaggccattcaattaagagacaggaagtctaaagtgagatatagcattgacactgtggtgtcagagctaatcagagagtataataatagatctgccattgggaacaccatagaagccctcttccaagggccccctaagttcaggcctataagaatt---aaccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcaccttaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgggatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttgatcatcaacactgagtacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggttacttcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgccggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagcccaataaagaaactgggagactaaacattaatggtccaacacgtaccaaattggagcccagtgcattttatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcctagacttgaggtcgattttgagcaagctttgttttccaaatatgtgggaaacaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcagttagatataaacattaacaagatgagtatggaggaagcatgctacggtactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgctctgggtgtcaagaaaagggacatactcgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttaggtctttagataagatcaagaaaggcaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgacagggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatacgatgcaagtctcagcccagtgtggtttagagctttagaggtggtcctccgagagatcggctactcagaggaggccgtatcactaatagaagggattaaccacacccatcatgtgtatcggaacaggacatattgtgttcttggtggtatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgaactgaacatggtagcttatggagatgatgtgttagctagttatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccctgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctaccagatcatcagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgctggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagtccccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-cgccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatacgca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF193622.1_Coxsackievirus_A16_isolate_YN10-02_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---tccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtaccaatagactgc-ccacgcggttgaaggggaaaacgttcgttacccggctaactacttcgagaaacc-tagtagtaccatgaaagttgcggagtgtttcgctcagca--ctt-cccca---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgcgtttcctttttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttatt-gggtacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattgctccttaa--ctgtagga-----aatggggtcacaagtttccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccctaccgctaaagtctccaagcgccgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagccaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacagcagtcgacaaacccactcgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaagttccctgatgttttgacagaggtaggcgtttttggtcagaatgctcagttccactacctgtatcgatctgggttttgtgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttgctggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatccgccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagtcccttttgactcagctcttaaccacagcaactttggtctactggtcatcccggtggtgccattagatttcaacacgggtgctacatctgaaattcctatcacagtcaccatagctcccatgtgcgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagtcaataa----------cttaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcaggtactacacccaatggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggctacaggtaaaatgctcatcgcctacaccccacctgggggtaatgtgcctgcggacagaatcacagcgatgttaggaacacatgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcattataaccatatggtatcgaactaactatgtcgtacccattggtgctcctactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggacacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cccacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcattgcaagccgcggagacaggggcatcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaactatcactccacgcaggagacagccattgggaatttcttcagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatctgatgggatatgctcagctgcgacggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcttaccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactaagaagtcaccacattccattgccctgagggtgtacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccttatttgttcaagaccaacccaaattataaaggaaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatctagcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaagggtgcgacaccatcgctaggtgcaattgtcagactggtatatactattgcagttccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtggggattgtctccactggaggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggagcaaggagtgtctgattatatcaaa-ggcctcggtgacgctttcggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagagccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagtccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctgttctgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaacgctagcaatattgtagttcccacagtttcagattctgatgcaattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccgctagtgtgtggtaaggccattcaattaagagacaggaagtctaaagtgagatatagcattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---aaccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagtgaggaggttcgacaatactgc-agggagcaagggtggataattccagaaacatcgaccaatctggaacgtcacctcaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttgggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggttacctcagtcggtaagattattggaattcatatcggtgggaatggacgccagggcttctgtgccgggctgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactaaacattaatggtccaacacgcaccaaattggagcccagtgtattttatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcctagacttgaggttgattttgagcaagctttgttttccaaatatgtgggaaacaccctgcatgagcctgacgagtatgcgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaacaagatgagtatggaggaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgctctgggtgtcaagaaaagggacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagatttgccctattccacctatgtgaaagatgagcttagatccttagataaaatcaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgcgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgagagatcggctactcagaggaggacgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgttcttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaacatggtagcttatggagatgatgtattagctagttatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacgttcttaaagagaggcttcctgccagatcaccagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----ttctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-ta----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX058533.1_Coxsackievirus_A16_strain_ensh01-CHN-12_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccata-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---tccc-t-----aagca-gtaacttagaagc------------tttgtacagtcac-gaccaa-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtaccaatagactgc-tcacgtggttgaaggggaaaacgttcgtcacccggctaactacttcgagaaacc-tagtagtaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttgccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actctagattatatattgctccttaa--ctgtagga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgactataaattacacaactataaactactataaggatgcatacgctgcaagtgcggggcgtcaggatatgtctcaagatccgaagaaatttactgaccctgtcatggacgtcatacatgagatggccccaccgctaaagtctccaagcgccgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagccaacatagttatagcctatggggagtggcctgagtactgcccagatacagatgcaacagcagtcgataaacccactcgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaagtttcctgatgttttgacagaggtaggcgtttttggtcagaacgctcagttccactacctgtatcgatctgggttttgtgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtacttggcactatcgcaggagggaccgggaacg------agaactctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagtcccttttgactcagctcttaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcaacacaggtgctacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaaccagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagttaataa----------cttaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcagatactacacccaatggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggctacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcgatgttaggaacacatgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgtgctgggtactttgactattacaccactggcattataaccatatggtatcaaactaactatgtcgtacccattggtgctcctactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgtaaggacacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgaccgcgttacaagtacta--------cccacagctgccaacactgaggcaagtagccacagattaggcactggtgttgtaccagcattgcaagccgcggagacaggggcatcgtctaatgctagtgacaagaatctcatcgagactagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttcttcagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatctgatgggatatgctcagctgcgacggaaatgcgagttattcacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggcaccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcttaccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacttagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacattccatcatcctgagggtatacatgagaatcaaacacgtcagggcatggattccaagacctctgagaaatcaaccttatttgttcaagaccaacccaaattataaaggaaa----cgatatcaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------gagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgctacacacaatgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccgctgcccaagggtgcgacaccatcgctaggtgcaattgtcaaactggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcctagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtggggattgtctccactggaggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggagcaaggagtgtctgattatatcaaa-ggcctcggtgacgctttcggtatgggcttcactgatgcagtgtctagggaagtggaggcattgaagagccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgctagctctgattgggtgtcatggaagtccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggctcgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ttgtcggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagtgtttactcactccccccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctgttctgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaacgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggtagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccgctagtgtgtggtaaggccattcaattaagagacaggaagtctaaagtgagatatagcattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcgggcctataagaatt---aaccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagtgaggaggttcgacaatactgc-agggagcaagggtggataattccagaaacatcgaccaatgtggaacgtcaccttaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtactaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttgggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgagaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggttacctcagtcggtaagattattggaattcatatcggtgggaatggacgccagggcttctgtgccgggctgaagagaggttactttgccagtgaacaaggagtgatccaatggatgaagtccaataaagaaactgggagactaaacattaatggtccaacacgcaccaaattggagcccagtgcattttatgatgtgtttgagggcagcaaagaaccagcagttttaaccagtaaggatcctagacttgaggttgattttgagcaagctttgttttctaaatatgtgggaaacaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacactaacaagatgagtatggaggaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgctctgggtgtcaagaaaagggacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataaaatcaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttagaatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgagagatcggctactcagaggaggccgtatcactaatagaagggatcaaccacacccatcatgtgtaccggaacaggacatattgtgttcttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaacatggtagcttatggagatgatgtattagctagttatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacgttcttaaagagaggtttcctgccagatcaccagttcccatttcttatccaccccaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcgcgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaaaggccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gagggggtaaatttgt-ta-taacc-a-g-aata----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF055239.1_Coxsackievirus_A16_strain_changchun028_complete_genome
-----------------------------------------------ccacctaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gcaatttagaagc------------tttgtacaatcat-ggccaa-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaagagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcagagtgtttcgctcagca--ctt-tcccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggaaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----tactta----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattacatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaaccataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagaccctaagaaatttactgaccctgttatggacgttatacatgagatggccccaccgctaaagtctccaagcgctgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacggatgcaacggcagttgacaaacccactcgacccgacgtatcagtgaacagatttttcacgttagacactaagtcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtaggtgtttttggtcaaaatgctcagttccactacctgtatcgatctgggttctgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcccccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtgccattagacttcaacacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacggagcttaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgtagagtggagaccattctggaagtcaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------agacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccgtggcagtctacaatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggaaaaatgctcatcgcctacaccccacctggggggaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgtgctgggtactttgactattacaccactggcatcataaccatatggtaccaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggacacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---atcaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactgcaagccgcggagacaggagcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttctttagccgtgctggtctcgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttgatgggatatgctcagctgcggcggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccaccaggggctccaaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccacctttggtgagcacctccaagcaaatgacctagattatggccaatgcccgaacaatatgatgggcacttttagcattaggacagtggggacagagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcagggcatggattccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgacattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------gttgggg------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacatcttgccacacacaacgactggacaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaactggtgtatactattgcagctccaaaaggaagcactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgcgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagagccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgattatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattctcggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaggttgaattcttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatttggccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcaccgttatggatgacctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagactctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggtagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagtccactagtatgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcccataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagcgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggatagttccagaaacagcgaccaatgtggagcgtcacctcaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggattccaaggtgcctattccggtgcacctaagcaaactctcaaaaagcctgtgctaaggacagccacagttcaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttggatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatctagagatgtcaccaagtttatcccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaactatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactgaacattaatggcccaacacgtaccaaattggagcccagtgcgttctacgatgtgtttgagggcaacaaagaaccagcagtcttaaccagtaaggatcctagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaacaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagtatggaagaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgagacttttcatgccaacccggggactgtgactgggtctgcagtggggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagcctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggttactcagaggaagctgtatcactaatagaagggatcaaccatacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggattgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagctagccagaactggtaaagagtatggactgacaatgacacctgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccagttcccatttcttatccaccccaccatgcccatgagggagatccacgagtctattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttc-------------------------atag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaat--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF924762.1_Coxsackievirus_A16_isolate_CVA16-WIBP-P4-731_complete_genome
------------------ttgaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattgctccttaa--ctgtagga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctaaagtctccaagcgccgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaatatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggctgtcgacaaacccactcgacctgacgtatcagtgaacagatttttcacgttagacactaagtcttgggccaagg------------------attcaaagggttggtattggaaattccctgacgttttgacagaggtaggcgtttttggtcaaaatgctcagttccattacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccagggcgctttactggtggctgtgctgcctgagtacgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgctactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagatgcagggatccctttgagccaactaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccatcatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggtttactggtcatcccggtggtgccattagatttcaacgcaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctacgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttctatccaaccccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagtcaataa----------cctaaagactaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacaggcgaattatgtgctgccttcagagcagatcctggaagagatggtccgtggcagtccacaatactaggtcaactctgtaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggcaaaatgctcattgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtaatctgggacttcggattgcaatcttctgtgacgttagtcgtgccatggatcagtaatacacactacagggcacatgcccgcgctgggtactttgactattacaccactggcattataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataatttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgatcg---accaaactgt--------------------------gaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtgccagcactgcaagccgcggagacaggggcgtcatctaatgctagtgacaagaatctcattgagactagatgtgtgttgaatcaccactccacgcaggagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggctatgttaattgggacattgatttgatgggatatgctcagctgcggcggaagtgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcggtccccttcatgtcaccagctagtgcttaccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaatccaaattataaaggaaa----tgatattaagtgtactagcactagtagagacaagat---aacaac---------------------------------------gttagga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtagtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctaggtatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtaggaattgtctccactggaggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaacctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgccaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatacttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcactggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagtaatattgtagttcccacagtttcagactctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccactagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaccccttaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatctataaattgtttgctggattccaaggtgcctattctggtgcacctaagcaatcccttaaaaaacctgtgctaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacattagacaggtgcaaactgatcaaggacattttactatgttaggagtgcgagatcgcctagctattttgccgcgccactcgcaaccaggaaaaactatttgggtggaacacaaattaatcaatgtgctagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttgatcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggctactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactgaacattaatggtccaacacgtaccaaattggagcccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaaccggtaaggatcctagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaacaccctgcatgagcctgacgaatatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagtatggaggaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaatcactagagacactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccctagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgacttttgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagaggaggctgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggattgacttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagctagccagaactggtaaagagtacggattgacaatgacacccgctgataagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagatgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattaggtcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF193626.1_Coxsackievirus_A16_isolate_FJ10-03_complete_genome
---------------------aaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-cagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaact-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagccctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaacccagggggg-cggcgtgtcgtgatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------gagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgtcatacatgagatggccccaccgctaaagtctccaagcgctgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcggcctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtaggtgtttttggtcaaaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgtaacgctagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtcgtgccattagatttcaacgcaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagctcaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccacccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagtcaataa----------cctaaagaccaatgagaccacaccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaacacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtcgtacctattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgaacaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaggtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactgcaagccgcggagacaggggcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaagagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-ggatacagatggttatgttaattgggacattgatttgatgggatatgctcagctgcggcggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgcagccaaacccaatggtgtgttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagcccaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattacggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattgccctgagggtatacatgagaatcaaacacgtcagagcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgacattaagtgtaccagcactagcagagacaagat---aacaac---------------------------------------gttagga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgctacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggtgtatactattgcagctccaaaaggaaacactacccggttagcttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtaggaattgtctccactggtggaaatggtcttgtgggatttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtatgggtttcactgatgcagtgtctagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaaaaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgaattcttaaataacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaagaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatacgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggtcgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccactagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaacccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggagatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactgaacattaatggtccaacacgtaccaaattggagcccagcgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcctagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaacaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagtatggaggaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaatcactagagatactaccaaaatgaagttctacatggataaatatgggttagacttgccctattctacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagaggaggctgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggaccacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt--------------------------aag---------------ctgaaccc-caccagaa----gtctgtcg----ga-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF193628.1_Coxsackievirus_A16_isolate_FJ09-01_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacctaca-gggcccac-t-gggcgctagcacactgattctgcgagatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattagctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaagccattcaa-actcttgattatatattgctccttaa--ctgtagga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggatgttatacatgagatggccccaccgctaaagtccccgagcgccgaggcatgtggttacagtgatcgtgtagctcagcttaccattgggaattccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtatcagtgaacaggtttttcacgttagacactgaatcttgggccaagg------------------attcaaaaggttggtattggaaattccctgatgttttgacagaggtaggtgtttttggtcaaaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgtaacgctagcaaatttcaccaaggcgctttactggtggcggtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaagg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattagcttaagaactaataattgtgcaaccattatagttccgtatatgaacacagttccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcaacacaggcgccacatctgaaattcccatcacagtaaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccacccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagtcaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcagtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggtaaaatgctcatcgcctacaccccgcctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggattgcaatcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcattataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcagagacaggggcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttctttagccgtgctggtcttgtcagtatcatcacaatgcccaccacgggcacgca-gaatacagatggttatgttaattgggacatcgatttgatgggatatgctcagctgcggcggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccgtctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcttaccaatggttttatgatggttatcccaccttcggtgagcacctccaagcagatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctacttgttcaagaccaacccaaattataaaggaaa----tgatattaagtgcaccagcactagcagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggtgtgtactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtgggagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtagggattgtctccactgggggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactacatcaaa-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaagcgttgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtaaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgccaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcattattgccagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttctcctccaagtttgtcatcgcatcaaccaatgctagtaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcatagaaaataacactgctaattttaagagatgcagcccactagtgtgtggcaaggccattcaattaagagacaggaaatctaaagtgagatacagcattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaacgtggaacgtcacctcaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttagattttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgtttgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgctagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactgaacattaatggtccaacacgtaccaaattggagcccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcctagacttgaggttgactttgagcaagctttgttttccaaatatgtaggaaacaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagtatggaagaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaatcactagagatactaccaaaatgaaattttacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaactttccatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagaggaggctgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgaactgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaggttacctgggaaaatgccacgttcttaaagagaggcttcctgccagatcaccagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctggaccc-caccagaa----gtctgtt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taac--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>GQ279371.1_Human_coxsackievirus_A16_strain_SZ/HK08-7_complete_genome
------------------ttgaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---c---cccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttatt-ggatacgtccccc-----ttaacct--------------caaggccattcaa-actcctgattatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctaaagtctccaagcgctgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtgggtgtttttggtcaaaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttactggtggctgtactgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattcccatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctctgagccaattaactgtgtgcccacatcagtggattaacttaagaactaacaattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcaacacaggtgccacgtctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaagcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagtcaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactgcaagccgcggagacaggggcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcattccacgcaggagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttgatgggatatgctcagctgcggcggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacctccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgaggatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttattagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-agcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggttaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttcct-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcattattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcattgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgtacagaaaacaacactgctaactttaagagatgcagcccactagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttggactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccagcgaaaaatttagagatgttaccaagtttattccagagacgatcaccggggcaagtgacgcaaccttggtcatcaatactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggttacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactgaacattaatggtccaacacgtaccaaattggagcccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcctagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaacaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagtatggaggaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataagtatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagaggaggctgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaataggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgataaaaacttttaaggggatcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF193621.1_Coxsackievirus_A16_isolate_SD09-05_complete_genome
---------------------aaa--cag-cct-gtgggttg-c-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttgca-----accct---t---cccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt--cccc---gtgtagatcaggtcgatgagtcactgta-aaccccacaggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagaactattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgactatatattgctcctcaa--ctgtaaga-----aatggggtcacaagtctccacccaacgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctaaagtcatcaagcgctgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcgtgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtgtcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaatttcctgatgtcctgacagaggtaggtgtttttggtcaaaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------aggattctcatcctccctacgccactacacagcctggtcaggttggtgcagttttgacgcacccttacgtgctggacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcaacacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagctcaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatgtaccaggggaagtacacaacctattggaaatatgcagggtggagaccattctggaagtcaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcaggtactatacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacacgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtgccagcactgcaagccgcggagacaggggcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttgatgggatacgctcagctgcggcggaaatgtgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcggggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccgaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgtgacaccatcgctaggtgcaattgtcaaaccggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgcggtggcatcctcaggtgccagcatggtgtggtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtgtgggcttcactgatacagtgtctagggaagtagaggcattgaagaaccatttaattggctcagaaggggctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggttaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgaatttttaaacaatctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcatcattgctagagccattgctgacaaataccactctagcgtttactcgctccctccagacccagaccactttgatggatataagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtcttttacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccactagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaatagagcagtgttggtgatgcagtctattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgaacacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaagcagggcagtgtggaggtgtggtcacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagattgaacattaatggtccaacacgtaccaagttggagcccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttacacagtagagatcctagactagaggttgattttgagcaagctttgttttccaaatatgtaggaaacaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagtatggaggaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataagtatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctacctcaggatgactttcgggcatttctacgaaacttttcatgccaacccggggactgtgactgggtccgcagtaggttgtaatcctgatgtgttctggaataaattaccgatcctggtgccagggtcgctcttagcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagaggaggctgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaagggggtcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacgatgacacccgctgacaagtcaccttgctttaacgaagttacctgggaaagtgccacattattaaagagaggcttcctgccagatcaccagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaagagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-a-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF193625.1_Coxsackievirus_A16_isolate_GX10-01_complete_genome
------------------ttgaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t--ccccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtggcgcgccagtcacgttttgg-tcaagcacttctg-tatccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcaccctcaagcca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtccaacagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatactgctccttaa--ctgtaaga-----gatggggtcacaagtctccacccagcgatccgggtcacacgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccggtaaagtctccaagcgctgaggcatgtggttacagtgatcgtgtggctcagcttaccatcgggaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtgtcagtgaacagatttttcacgttagatactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtaggtgtttttggtcaaaatgctcagttccactacctgtatcggtctgggttttgcgtgcacgttcagtgcaacgctagcaaatttcaccaaggcgctttactggtggctgtgctgcctgagtacgtactcggcactatcgcaggagggactgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttgagccaattgactgtgtgcccacatcagtggattaacttaagaactaacaattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcaacacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgcgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagaacttaaacctggtactaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagggtggagaccattctggaagtcaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------agacgggcgaattatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacgatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggatagaatcacagcaatgctaggaacacatgtgatctgggacttcggattgcagtcttctgtaacgctggtcgtgccatggatcagtaatacacactatagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatcct--------gttgcagatatgattg---accaaactgt--------------------------gaacaatcaagtgaatcgttccttgactgcgttgcaagtacta--------cctacagctgccaacactgaggctagtagtcacagattaggcactggtgtcgtaccagcactgcaagccgcggagacaggggcgtcgtctaatgctagcgacaagaatctcattgagaccagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-ggatacagatggttatgttaattgggacattgatttgatgggatatgctcagctgcggcggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgaattagtcccccaattactgcagtacatgtatgtcccgccaggggctccaaaacctacctccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccacctttggtgagcaccttcaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggattaagaagtcaccacactccattgccctgagggtgtacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcggcaccttgccacacacaacgactgggcaaaccttgtgtgggaagacagctctagggacttgttagtctcttccaccactgctcaggggtgcgacaccatcgctaggtgcaattgtcaaaccggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgctatttgtggaagctagtgagtattacccagctagataccaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtaggaattgtctccactggtggaagtggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatttaactggctcggaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctgaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgagttcttaaacaacctgaaacagcttcct-ctgttggagaaccagatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcagaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacctatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaactaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagattcttacaagacggaccttggccgactcgacgcaggcagggccgctaaactttgcacagagaacaacactgctaactttaagagatgcagcccactagtgtgtggcaaagccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agtcttgaagagaagccggccccagatgccatcagtgacttacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttagtgatgcagtccattgccaccgtggttgtggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacattagaaaggtgcaaactgaccaaggacatttcgctatgttaggagtgcgagatcgcctagccattttaccacgccactcgcaaccaggaaaaacaatttgggtagagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaatactgagtacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaagattattggaattcatatcggcgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagattcaatggatgaagtccaataaagaaactggaagactgaacattaatggtccaacacgtaccaaattggagcccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcctagacttgaggttgattttgagcaagctttgttttctaaatatgtgggaaacaccctgcatgagcctgacgagtatgtgacgcaggctgctctccactatgcaaaccagctaaagcaattaaatataaacattagtaagatgagtatggaggaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacttatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgacgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagaggaggctgtatcactaatagaagggattaaccacactcatcatgtatatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccctttgattaaaacttttaaggggatcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccagttcccatttctcatccaccctaccatgcccatgagggagatccacgaatccatacgttggactaaagatgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttattct--a--atatacagttt-------------------------aaaa---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF193623.1_Coxsackievirus_A16_isolate_HN11-03_complete_genome
---------------------aaa--cag-cct-gtgggttg-t-tcccacccacg-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gcaacttagaagc------------tttgcacaatcac-gaccaa-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaatcca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgag-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtc-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggtcattcaa-actcttgattatatattgttccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggcttgaccataaattacacaactataaattactacaaggatgcatacgctgcaagtgcggggcgtcaggatatgtcccaagacccaaggaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctaaagtcatcaagcgctgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagtagctaacatagttatagcctatggggagtggcctgagtattgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggctaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtaggtgtttttggtcaaaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccttttgattcagctctcaaccactgcaactttggtctactggtcatcccggtggtgccgttagatttcaacacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtttcaagggcaattctgcccagattctatccaactccgcctatacatataccaggggaagtgcacaacctattggaaatatgcagagtggagaccattctggaagtcaataa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagta------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggtaaaatgctcattgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggattgcagtcttctgtgacgttagttgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggccaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattgggcactggtgttgtgccagcactgcaagccgcggagacaggggcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggagacggccattggaaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttgatgggatatgctcagctgcggcggaaatgcgagttatttacctacatgcgctttgatgctgagttcacatttgtcgtagccaaacccaatggtgagttagtcccccaattattgcagtacatgtatgtcccaccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttacgatggttatcccaccttcggtgagcacctccaagcgaatgacctagattatggccaatgcccgaataatatgatgggcacctttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------gagtttggacagcaatctagcgccatatatgtgggcaactatagggtggtgaaccgacaccttgccacacacaacgattgggcaaaccttgtgtgggaggatagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaaatgtcaaaccggtgtgtactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccacctcatgctcgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagttgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagttcaatgatatggccaacgccgcgaaagggcttgagtggatctctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagctca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaagggtgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggcaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccttattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgtaggcggttttatatggactgcgatatagaggtgacagattcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgccaactttaagagatgcagcccactagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattgggaacaccatagaagccctctttcaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagtgaggaggttcggcaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagccctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgctaggagtgcgagatcgcctagccattttgccgcgccactcacaaccggggaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatctggaactcacactagtaaccttggacactaacgaaaaatttagagatgtcaccaagtttattccagagacgattaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaagattattggaattcacatcggtgggaatggacgccaaggcttctgtgctggattgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactgaacattaatggcccaacacgtactaaattggagcccagtgtattctatgatgtgtttgagggcagtaaagaaccagcagtcttaaccagtaaggatcctagacttgaagttgattttgaacaagctttgttctccaaatatgtaggaaccaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagtatggaggaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagcgccctgggtgtcaagaaaagagacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaatttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattccggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggtcctccgagagatcggctactcagaggaagctgtgtcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaatatggtagcttatggagacgatgtgctagctagctatccattccctattgactgctcggagctagccaaaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccagtttccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaagattacgtgcgctctctgtgcctcttagcgtggcacaatgggaaggaggaatatgaaaagtttgtgagcacaattagatcagttcccattggaaaagctttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aaaaaaaaaaaa-----------------------------------------------------------------------------aaaaaaaa-------------------------------------------------------------------------------------------------------------------------------------
>JX068828.1_Human_coxsackievirus_A16_strain_BJ11/12_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-tggggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagtg-gcaacttagaagc------------tttgtacaatcat-gaccaa-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----tatcta----tttgtt-gcatacgtccctc-----ttaatct--------------caaggtcattcaa-actcttgattatatattgctccttaa--ctgtagga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttaccgaccccgtcatggacgttatacatgagatggccccaccgctaaagtctccaagcgccgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaagcctactcgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggctaagg------------------attcaaagggttggtattggaagttccctgatgttttgacagaggtaggcgtttttggtcaaaatgctcagtttcactacctatatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttactggtggctgtgctgcccgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcaccctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtactagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagtcccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggcctactggtcatcccggtggtgccattggatttcaacacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcagggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagtcaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgttcgcaggctcattcatggccacaggcaaaatgctcatcgcttacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccgtggatcagtaatacacactacagggcacacgcccgcgctgggtattttgactattacaccactggcattataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggccttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggagatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactgcaagccgcagagacaggggcgtcgtctaatgctagtgataagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggcacaca-gaatacagatggttatgtcaattgggacattgatttgatgggatatgcccagctgcggcggaaatgcgagttatttacctacatgcgctttgacgctgagttcacatttgtcgtagccaaacccaatggtgagttagtcccccaactactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcttaccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgtccgaataatatgatgggcacttttagcattaggacagtagggacagagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttagaaccaacccaaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------gagtttggacatcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacactatcgctaggtgcaattgtcaaaccggtgtgtactattgcagctccaaaaggaaacactacccggttagtttcaccaagcctagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcagatgccagcatggtgtggtaggaattgtctccactggaggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggccttggtgacgcctttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcactctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagttcaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagtaagtttattgattggcttaaggaaaagattataccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtctatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacgggtaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtctactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgtcaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtatctttcacctccaagtttgtcattgcatcaaccaatgctagtaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaaactttgcacagaaaacaacactgctaactttaagagatgcagcccactagtgtgtggtaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagctaatcagagagtataataatagatctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---aaccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtagatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccattgccactgtggttgcggttgtatccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgatcaaggacatttcactatgttgggagtgcgagatcgcctagccattttgccgcgccactcgcaaccagggaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaagtttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaaaattattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggatactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactgaacattaatggcccaacacgtaccaaattggagcccagtgcattctacgatgtgtttgagggcagcaaagaaccagcagtcttaactagtaaggatcctagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaacaccctgcatgagcctgacgagtatgtgacacaggccgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagtatggaggaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaaggaaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgacttttgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctaccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagaggaggctgtatcactaatagaagggatcaaccatacccatcatgtatatcggaacaggacatattgcgtccttggtggaatgccttcaggttgttccggtacttccatctttaattccatgatcaataacataataatcagaacccttttgattaaaactttcaaggggattgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccagttcccatttcttatccaccctaccatgcctatgagggagatccacgagtctattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcacaatgggaaggaggaatatgaaaagtttgtgagcacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatacgca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX986740.1_Human_coxsackievirus_A16_isolate_Wuhan0109/HuB/CHN/2011_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcggaatctttgtgcgcct-g-ttttata-----accct---t---tccc-t-----aagta-gcaacttagaagc------------tttgcacaatcac-gaccaa-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattgctcctcaa--ctgtaaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagcgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctaaagtctccaagcgctgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaatttcctgatgtcttgacagaggtaggtgtttttggtcaaaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagttcagacgcacccttacgtgctagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaatacagttccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcaatacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcaggtctgcgccaggcggtaaagcaaggtataccaacagagctcaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagggtggagaccattctggaagtcaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgccgccttcagggcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcaggtattatacccaatggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacacgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaacacacactacagggcacacgcccgcgctgggcactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtcgtgcccattggtgctcccactacagcatatatcgtggctttagcagcagctcaggataacttcactatgaaactgtgcaaggatacggaagacattgagcaaacggccaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcgagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaatactgaggcaagtagtcacagattaggcactggtgttgtgccagcgctgcaagccgcggagacaggggcttcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggagacagccaatgggaacttctttagccgtgctggtcttgtcagtatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttaatgggatatgctcagctgcggcggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcatttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaacaatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccatcaccctgagggtatacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagactaacccgaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatctttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggagcctggtgactgtggtggcatcctcaggtgccagcatggtgtggtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatctaattggctcagaaggggctgttgagaagatcttgaagaacttggtgaagctgatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcgtggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggttaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcatcgattggcttaaggaaaagattattccggccgctaaagagaaagttgaatttttaaacaatctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagccatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagctaagagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcgctccctccagacccagaccattttgatggatataagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatgggaaggacatgtccctattttgccaaatggtttctacagtagactttataccacccatggcatcattggaagagaaaggagtgtcctttacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgtgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccactagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattgggaacactatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggctccagatgccatcagtgacttacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaatagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctgggtttcaaggtgcctattctggtgcacctaagcaagctctaaaaaaacctgtgctaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgtaacatcagacaggtgcaaactgaccaagggcatttcactatgttaggagtgcgggatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaacttacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagatgatcaccggggcaagcgacgcaaccttggtcatcaacactgaacacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttttaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacgaaagcagggcagtgtgggggtgtggtcacctcagtcggtaagattattgggattcatatcggtgggaatggacgccaaggcttctgtgctggattgaagagaggctactttgctagtgaacaaggagagatccaatggatgaaatccaataaagaaactgggagattgaacattaatggtccaacacgtaccaaattggagcccagtgcattctacgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcctagactagaggttgattttgagcaagctttgttttccaaatatgtaggaaacaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattgataagatgagtatggaggaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatacgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagctagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacctttcatgccaacccggggactgtgactgggtccgcagtagggtgtaagcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagaggaggctgtatcactaatagaagggatcaaccacactcatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctatcgactgctcggagctagccagagctggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaacgaagttacctgggaaaatgccacattcttgaagagaggcttcctgccagatcaccagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcccattggaaaagccttggctttaccaaattttgagaacttgagaagaaataggctcgagttattct--a--atatacagttt-------------------------aaag---------------ctggaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatacgca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX068827.1_Human_coxsackievirus_A16_strain_TS10/07_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-c-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtaccaatagactgc-tcacgcggttgaaagggaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaatcca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttgccatatagctattggattggccatccgg--tgtctaacagagccattgtt-----taccta----tttatt-ggatacgtccctc-----ttcatct--------------caaggccattcaa-actcttgattatatactgctccttaa--ctgtagga-----aatggggtcacaagtttccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggctccaccgctaaaatctccaagcgccgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacccgacgtgtcggtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtaggagtttttggtcagaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccagggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgctactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatcccattgagccaattaactgtgtgcccacatcagtggattaacttaaggactaataattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctcttaaccactgcaactttgggctactggttatcccggtggtgccattagatttcaacacaggtgctacatctgaaattcccattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgacgatggtgtttccgcaccaattctaccaggtttccatccaactccgcctatacatataccaggggaagtacataacctattggaaatatgcagagtggaaaccattttggaagtcaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccatggcagtccacaatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggtaaaatgctcatcgcctacaccccacctgggggtaatgtgcctgcggacagaatcacagcaatgttaggaacacatgtgatctgggatttcgggttgcaatcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcactgggtactttgactattacaccactggcattataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgtaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cccacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactgcaagctgcggagacaggggcatcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaatcatcactccacgcaggagacagccattggaaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttgatgggatatgctcagctgcgacggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgttcgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcttaccaatggttttatgatggttatcccaccttcggcgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaagcacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgttcaagaccaacccaaattatagaggaaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaactggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtagggattgtctccactggaggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgacgctttcggtatgggcttcactgatgcagtgtctagggaagtggaggcattgaagaaccatttaatcggttcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcttctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggctgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgagcagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaagagagtctatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattctgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtctcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttataagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccgctagtgtgtggtaaggctattcaattaagagacaggaagtctaaagtgagatatagcattgacactgtggtgtcagagctaatcagagagtataataataggtctgccatcgggaacaccatagaagcactcttccaaggaccccctaagttcaggcctataagaatt---aaccttgaagaaaagccggccccagatgccattagtgacttacttgccagtgtggatagtgaggaggttcgacaatactgc-aaggaacaagggtggataatcccagaaacatcgaccaatgtggaacgtcaccttaatagagcagtgttggtgatgcagtccgttaccaccgtggttgcggttgtgtccctcgtctatgtcatttataaactgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacacttcactatgttaggagtgagggaccgcctagccattttgccacgccacgcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgctgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaaacccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggttacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgccggactgaagagaggttactttgctagtgaacaaggagagattcaatggatgaagtccaataaagaaactgggagactaaacattaatggtccaacacgtaccaaattggagcccagtgcattttatgatgtgtttgagggcagcaaagagccagcagtcttaaccagtaaggatcctagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaacaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagcgtggaggaagcatgctacggcactgaatatttagaggccatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagggacatacttgacccaatcaccagagatactaccaaaatgagattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcctgattgaagccagtagtctaaatgactcagtctaccttaggatgattttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagaggaggccgtgtcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatactgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaacatggtagcttatggggatgatgtgttagctagttacccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacgttcttaaagaggggcttcctgccagatcatcagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaagagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttagt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatacgca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ034149.1_Human_coxsackievirus_A16_isolate_SH/CHN/2009_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-t-tcccatccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-acaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtaccaataggctgc-tcacgcggttgaaggggaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagtcagtagtcctccggcccctgaatgcggctaatcctaactgcagagcgcgcaccctcaatcca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgag-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttatt-gggtacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattacatattgctccttaa--ctgtagga-----aatggggtcacaagtctccacccagcgatccgggtcacacgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctaaagtctccaagcgccgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtgtcagtgaacagatttttcacgttagacactaaatcttgggctaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtaggcgtttttggtcagaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaattccaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggtactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggattcctttgagccaattgactgtgtgcccacatcagtggatcaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctcttaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcaacacaggtgctacatctgaagttcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgtcaggcggtaaagcaaggtataccaacagagctcaaacctggtaccaatcagtttcttactactgatgatggtgttcccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattttggaagtcaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacaaagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggcccgtggcagtccacaatactaggtcaactctgcagatactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggcaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggatagaatcacagcaatgttaggaacacatgtgatctgggatttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactatagggcacacgcccgcgctgggtactttgactattacaccactggcattataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagacatgattg---accaagctgt--------------------------gaacaatcaagtgaatcgctccctgactgcgttgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcatcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaatcatcactccacgcaggagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttacgttaattgggacattgatctgatgggatatgctcagctgcgacggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatccgtgtccgtgaaaatgacggacccgccagcccaagtgtcagtccccttcatgtcaccagctagtgcttaccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaacaatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaagcacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgttcaagaccaacccaaattataaaggaaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcatgcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgattgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaactggtgtatactattgcagccccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtggtagggattgtctccactggagggaatggtcttgtggggtttgccgatgtcagagaccttctgtggctagatgaagaagcaatggaacaaggggtgtctgactatatcaaa-ggcctcggtgacgctttcggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggagaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcatcattgctagagctattgctgacgaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtggtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatgatttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccgctagtgtgtggtaaggccattcaattaagagacaggaagtctaaagtgagatatagcattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattgggaacacaatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---aaccttgaagaaaagccggccccagatgccattagtgacttacttgccagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcaccttaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggtcgtgtccctcgtctatgttatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagtttagactttgccttatccctcctaaggcgtaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcatatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggttacctcagtcggtaagattattggaattcatatcggtgggaatggacgccaaggtttctgcgccggactgaagagaggttactttgctagtgaacaaggagagatccaatggatgaagtccaacaaagaaactgggagactaaacattaatggtccaacacgtaccaaattggagcccagtgcattttatgatgtgtttgagggcagcaaagagccagcagtcttaaccagtaaggaccctagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaacaccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagtatggaggaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagggacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtaaaagatgagctcagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgacgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagcctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagaggaggccgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaataggacatattgtgtccttggtggtatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgatcaaaacttttaaggggatcgatttagatgagctgaacatggtagcttatggagatgatgtgttagctagttatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagttacctgtgaaaatgccacattcttaaagagaggcttcctgccagatcaccagttcccatttcttatcccccctaccatgcccatgagggagatcccggagtccattcgttggattaaagacgcccgcaacattcaggatcccgtgcgctttttgtgccttttagcggggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccatgggaaaacccttggttataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM402019.1_Enterovirus_A_strain_S0093b/CA16/2013/CHN_complete_genome
------------------ttaaaa--caa-gct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactggttctgcgggacctttgtgcgcct-g-ttttata-----accct---t----ccc-t-----aagcg-gtaacttagaagc------------tttgtacaatcat-ggccaa-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-tcccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcgacctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aggttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----ttcatt-ggcttcgtccctc-----ttaatct--------------caaggctattcaa-actctcgattacatattgttccttaa--ctgtaaga-----aatgggatcacaagtctccacccagcgatccggatcacatgagaactcaaactctgcatcgg-aggggtcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggacatgtcccaagacccgaagaaatttactgaccctgtcatggatgttatacacgagatggccccaccactaaagtctccaagcgctgaggcgtgtggttacagtgatcgtgtagctcagcttaccattggaaactccactatcacgacacaggaagcagctaacatagtcatagcctatggggagtggcctgagtattgcccagacacagatgcaacagcagtcgataaacccactcgacctgacgtgtcagtgaatagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttaactgaggtaggtgttttcggtcaaaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggtgccttactagtggctgtgctgcctgagtatgtactcggtactatcgcaggagggaccgggaacg------agaattcccatcctccctacgccaccacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcggggatccctttaagccaattaactgtgtgcccacaccagtggattaatttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctctcaatcactgcaactttggtctactggttatcccagtggtgccattagatttcaacacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggagtttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtctccgcaccaattctaccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgtagagtggagaccatcctggaagtcaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgtttcccagtgtcggtgcagagta------aaacgggcgaattatgtgctgctttcagagcagaccctggaagggatggcccgtggcagtctacaatactaggtcaactctgcagatactacacccagtggtcaggctcactggaggtgacattcatgtttgcaggttcattcatggccacaggaaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggattgcagtcttctgtgacattagtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtcgtacctattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggacaccgaggacattgagcaaacggctaacatacaaggggatccc--------gttgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaaccgctccttgactgcgatgcaagtacta--------cctacagctgccaacactgacgcaagtagtcacaggttaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtctaatgctagtgacaagaacctcattgagactagatgtgtgctgaaccatcactccacgcaagagacagccattgggaatttctttagccgtgccggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttaatgggatatgctcagctgcggcggaagtgcgagttattcacctacatgcgctttgatgctgaattcacgtttgtcgtagccaaacccaatggtgagttagtcccccaattactccagtacatgtatgtcccgccaggggccccgaaacctacttccagagattcgtttgcttggcagacagccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcatatcaatggttttatgatggttatcccacctttggtgagcacctccaagcaaacgacctggattatggtcaatgcccgaataatatgatgggcacttttagcgttaggacagtagggactgagaagtcaccacactccattaccctgagggtgtatatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaaatgtaccagcactagtagagacaaaat---aacaac---------------------------------------gctggga------------------------------------------aagttcggacagcaatcgggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactggacaaaccttgtgtgggaggacagctctagggatttgttagtctcctccaccaccgcccagggttgcgacaccatcgctaggtgcaattgtcaaaccggtgtatactattgcagctctaaaagaaaacactacccggttagtttcaccaagcccagcctgatatttgtggaagctagtgagtattacccagctagatatcagtcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcagatgccagcatggtgtggtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaggaagcaatggagcagggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaaggaccatctaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttggtcatagttgttaggagtgactatgacatggtcaccctcacggctacgctagccctgattgggtgtcatggaagcccttgggcatggattaaagcgaaaacagcctctattctcggcattcccgtagtgcagaaacagggcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggctcgagtggatttctagtaaaattagcaaattcattgactggcttaaagaaaagatcattccggccgctaaagaaaaagttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatctcaaaccttgaacagtctgctgcctcgcaagaagatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgccgcaagttccagccactctatgcggttgaagccaaaagggtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaaatcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtctactcactccctccagacccagaccattttgatggatataagcaacaagcagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgtacagaaaacaacactgctaactttaagagatgtagcccattagtgtgcggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagttaatcagagagtacaataataggtctgccgttgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcaatccattgccaccgtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccaagcttggactttgccttatcccttctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatctgggtggaacacaaattaatcaatgtgttggatgctgttgaattggtggatgagcaaggtgtaaatttggaacttacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctctatgttcgtcccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggtgtggtcacttcagtcggtaagattattggaatccatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaataaagaaactgggagactgaatattaatggtccaacgcgtaccaaattggagcccagtgcattctacgatgcgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcccagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaataccctgcatgagcctgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacactaataagatgagcatggaagaagcatgctacggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatctttagataagattaagaaagggaagtcccgcttgattgaagccagtagtctaaacgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaagtggttctccgagagatcggctactcagaggaagctgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacgtattgtgtccttggtggaatgccttcaggttgttccggcacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagctagccagaactggtaaagaatatggattaacaatgacacctgctgataagtcaccttgcttcaatgaagttacctgggaaaatgctacattcttaaagagaggcttcctgccagatcatcagttcccatttcttatccatcctaccatgcccatgagggagatccacgagtccattcgctggactaaagacgcacgcaacactcaggatcacgtgcgttctttgtgcctcttagcgtggcataatgggaaggaggaatatgaaaattttgtgagcacaattagatcagttcctattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--aaatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aataacgcaaaa-----------------------------------------------------------------------------a--------------------------------------------------------------------------------------------------------------------------------------------
>KM215267.1_Coxsackievirus_A16_isolate_CVA16/SZ29/CHN/2014_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactggttctgcgggacctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gtaacttagaagt------------tttgtacagtcat-ggccaa-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccttcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atcctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----ttcatt-ggcttcgtccctc-----taaatct--------------caaagccatccaa-actctcgattacatattgctcctcaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatctgggtcacatgagaactcaaactctgcatcgg-agggatcgaccataaattacacaaccataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggatgttatgcatgagatggccccaccgctaaagtctccaagcgctgaggcgtgtggttacagtgatcgagtggctcagcttaccattggaaactccactatcacgacacaggaagcagctaacatagtcatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtgtcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtaggtgttttcggtcaaaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggtgccttactagtggctgtgctgcctgagtatgtgctcggtactatcgcaggagggaccgggaacg------agaattctcatcctccctacgctaccacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttaagccaattaactgtgtgcccacatcagtggattaatttaagaaccaataattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggtctactggttatcccagtggtgccattagatttcaacacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggagtttgcgggtctgcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtctccgcaccaattctgccaggcttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgtagagtggagaccatcctggaagtcaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgtttcccagtgtcggtgcagagta------aaacgggcgaattatgtgctgctttcagagcagaccctggaagagatggtccatggcagtctacaatactaggtcaactctgcagatactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggttcattcatggccacaggaaaaatgctcatcgcctacaccccacctgggggaagtgtgcctgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggattgcaatcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaaccaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatactgaggacattgagcaaacggctaatatacaaggggatccc--------atcgcagatatgattg---accaaactgt--------------------------gaacaatcaagtgaaccgctccttgactgcgatgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcatctaatgctagtgacaagaacctcattgagactagatgtgtgttgaaccatcactccacgcaagagacagccattgggaatttctttagccgtgctggtctagtcagcatcatcacaatgcccaccatgggtacaca-gaatacagatggttatgttaattgggacattgatttaatgggatatgctcagctgcggcggaaatgcgagttattcacctacatgcgctttgatgctgaatttacatttgtcgtagccaaacccaatggtgagctagtcccccaattactccagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagacagccaccaacccgtctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcatatcaatggttttatgatggttaccccacctttggtgagcacctccaagcaaacgacctggattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccttgagggtgtatatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgacattaagtgtaccagcactagtagagataagat---aacaac---------------------------------------gctggga------------------------------------------aagtttggacagcagtcgggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacgcacaacgactggacaaaccttgtgtgggaggacagctctagggacttgttagtctcctccaccaccgcccagggatgcgacaccatcgctaggtgcaattgtcaaaccggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcagtcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggtatcctcagatgccagcatggtgtggtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggacgaagaagcaatggagcagggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtacgggcttcactgatgcagtgtctagagaagtagaggcattgaagaaccacctaattggctcagaaggagctgttgagaaaatcttgaagaacttggtgaagctaatctcggctttagtcatagttgttaggagtgactatgacatggtcaccctcacggctacgctagccctgattgggtgtcatggaagcccttgggcatggattaaagcgaaaacagcctctattcttggcattcccatagtgcagaaacagagcgcttcgtggctaaagaagtttaatgatatggccaacgccgcgaaagggctcgagtggatttctggtaagattagcaagttcattgactggcttaaagaaaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ttattggagaaccaaatctcaaaccttgaacagtctgctgcctcgcaagaagatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgccgcaaattccagccactctatgcggttgaagctaaaagggtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaaatcacttgctacgggcattattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgacttgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccattagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatacagtgttgacactgtggtgtcagagttaatcagagagtataacaataggtctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacccaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttggactttgccttatcccttctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatctgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtgaatttggaacttacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggttatcaacactgagcacatgccctctatgttcatcccagtaggtgatgttgtacagtatgggtttttaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggtcacttcagtcggtaaaattattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaagttactttgccagtgaacaaggagagatccaatggatgaagcccaataaagaaactgggagactgaatattaatggcccaacacgtaccaaattggagcccagtgcattctacgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcccagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaataccctgcatgagcctgatgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacactaataagatgagtatggaagaagcatgctacggcactaaatttctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagagatactaccaaaatgaaattctacatggataaatacgggttagacttgccctattccacctatgtgaaagacgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctttatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccaatcctgctgccaggatcgctctttgcatttgactattcaggatatgacgcaagtcttagcccagtgtggtttagagctttggaagtggttctccgagagatcggctactcagaggaagctgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacgtattgtgtccttggtggaatgccttcaggttgttccggcacttccatcttcaattccatgatcaataacataataatcagaacccttttgatcaaaacttttaaggggattgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccccattgactgctcggagctagccagaacaggtaaagagtatgggctaacaatgacacctgctgacaagtcaccttgctttaatgaagttacctgggaaaatgctacattcttaaagagaggcttcctgccagatcatcagttcccatttcttatccatcctaccatgcccatgagggagatccacgagtccattcgctggactaaagacgcacgcaacactcaggaccacgtgcgctctctgtgcctcttagcgtggcataatggaaaggaggaatatgaaaagtttgtgagcacaattagatcagttcctattggaaaagctttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM516102.1_Coxsackievirus_A16_isolate_Wh16_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccactcaca-gggcccac-t-gggcgctagtacactggtatctcggtacctttgtacgcct-g-ttttata-----ccccc---t----ccc-t-----gattt-gcaacttagaagc--------------aacgcaaacca-gatcaa-tagtaggtgtgacataccagtcgcatcttga-tcaagcacttctg-tatccccggaccgagtatcaatagactgt-gcacacggttgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtaacgccattgaagttgcagagtgtttcgctcagca--ctc-ccccc---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatatagacatggtgcg-aagagtctattgagctagttagcagacctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtc-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattgctcctcaa--ctgtagga-----aatggggtcacaagtttccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctaaaatctccaagcgccgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcccgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtgtcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtaggcgtttttggccagaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccattacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctcttaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcaacacaggtgctacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcgataaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggaaaccattttggaagtcaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgctgccttcagagcagaccctggaagagatggtccgtggcaatccacaatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgttaggaacacatgtgatctgggatttcgggttgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcattataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggacacggaggacattgagcaaacggctagcatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactgcaagctgcggagacaggggcatcgtctaatgctagtgacaagaacctcattgagactagatgtgtgttgaatcatcactccacgcaggagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatctgatgggatatgctcagctgagacggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgttcgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcttaccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaagcacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgttcaagaccaacccaaattataaaggaaa----tgatattaagtgcaccagcacaagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtagtgaatcgacaccttgccacgcacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaactggtgtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagcattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgcggtggtatcctcaggtgccagcatggtgtggtagggattgtctccactggaggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctagatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggtctcggtgacgctttcggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatttgattggctcagaaggagttgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtctatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctccccaggaacaggtaagtctcttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccgctagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagcattgacactgtggtgtcagagctaagcagagagtataataataggtctgccattgggaacaccatagaagcactcttccaaggaccccctaagttcaggcctataagaatt---aaccttgaagaaaagccggccccagatgccattagtgacttacttgccagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataatcccagaaacatcgtccaatgtggaacgtcaccttaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccatcttgccgcgccacgcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggttacctcaatcggtaagattattggaattcacatcggtgggaatggacgccaaggcttctgtgccggactgaagagaggttactttaccagtgaacaaggagagatccaatggatgaaatccaataaagaaactgggagactaaacattaatggtccaacacgtaccaaattggagcccagtgcattttatgatgtgtttgagggcagcaaagagccagcagtcttagccagtaaggatcctagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaacaccctgcatgagcctgacgagtgggtgacacaggctgctctccactatgcaaaccagctaaagcaattagacataaacactaataagatgagcatggaggaagcatgctacggcactgaatatctagaggccatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagggacatacttgacccaatcactagagatattaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcacctctatgaaacttttcatgccaacccggggactgtgacagggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagaggaggccgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataatataataatcagaacccttttgattaaaacttttaaggggatcgatttagatgagctgaacatggtagcttatggagatgatgtgttagctagttatccattccctattgactgctcggagctagccagaactggtagagagtatggattgacgatgacgcccgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttagt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX580041.1_Coxsackievirus_A16_strain_CA16-196_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct--cc---cccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccag-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-ttacgcggtcgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctactggattggccatccgg--tgtccaacagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaagccattcaa-actcttgactatatattgctcctcaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactccgcatcgg-agggttcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaattcactgaccctgtcatggacgttatacatgagatggccccaccgctcaagtctccaagcgctgaggcatgcggttatagtgatcgtgtggctcagcttaccattgggaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcgacagcagtcgacaaacccacacgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------actcaaagggttggtattggaaattccctgatgttttgacagaggtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgcaagtaaatttcaccaaggtgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggactgggaacg------agaattctcatcccccctacgccactacacagcccggtcaggttggtgcagttctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgtccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttcccttcgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtaccattggatttcaacgcaggcgccacatctgaaattcccattacagttaccatagctcccatgtgcgcggaatttgcgggtctgcgccaggcagtaaagcaaggtataccaacagagctcaagcctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccacccaactccacctatacacataccgggagaagtacacaacctattggaaatatgcagagtggagaccattctggaagttaacaa----------cctaaagactaatgaaaccacccct------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgaattatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactaggccaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggctacaggtaaaatgctcatcgcctacacccctcctgggggaaatgtgcccgcggacagaatcacagcaatgctaggaacacatgtgatctgggactttggattgcagtcttctgtgacgttggtcgtgccatggattagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtagtacccattggtgctcccactacagcgtacatcgtggctttggcagcagctcaggacaatttcactatgaaactatgcaaggatacggaggacattgagcaaacggctaatatacaaggggatcct--------attgcagacatgattg---atcagactgt--------------------------gaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagctgcggagacaggggcgtcgtccaatgctagtgacaagaatctcattgagactaggtgtgtgttgaaccatcactccacgcaggagacagccattgggaatttctttagccgtgccggtcttgtcagcattattacaatgcccaccacgggcacaca-aaatacagatggttatgttaattgggacattgacttgatgggatatgctcagctgcggcggaaatgcgaattgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattattgcagtacatgtatgtcccaccaggggctccgaaacctacttccagagattcgtttgcttggcagactgctaccaacccatctgtgtttgtgaaaatgacagaccctccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccagtggttttatgatggttatcccaccttcggagagcacctccaagcaaatgacttggattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtaggaactgagaagtcaccacactccatcaccctaagggtatacatgagaatcaaacacgttagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcaccagcactagtagggacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaattatagggtggtgaatcgacacctcgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagagacttgttagtctcttccaccactgcccaggggtgcgacactatcgctaggtgcaattgtcaaaccggagtatactattgcagctccaaaaggaaacactacccggttagcttcaccaagcccagtctggtatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggtatcctcaggtgccagcatggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatatcagagacctcctatggctggatgaagaagcaatggaacaaggagtgtctgactacatcaaa-ggcctcggtgatgcttttggtatgggcttcactgatgcagtgtccagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaaattaatctcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggtattcccatagtgcaaaagcagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcgaaagggcttgagtggatttctagtaaaatcagcaagttcatcgattggcttaaggaaaagattattccggccgctaaggagaaagttgaattcttgaacaacctgaagcagcttccc-ctgttggagaaccaaatctcaaatcttgaacaatctgctgcctcgcaggaggatctagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgtaagtttcagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccaggaacaggtaagtcacttgctacgggcattatagctagagctatcgctgacaaataccattctagcgtctactcactccctccagacccagaccattttgatggatacaagcaacaagcagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaaccaatgctagcaacattgtagtccccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggtcgtctcgacgcaggcagggctgctaagctttgcacagaaaacaacactgctaacttcaagagatgcagcccactagtgtgtggcaaggccattcaattaagagataggaagtctaaagtaagatatagtattgacactgtagtgtcagagttaatcagagagtataataataggtctgctatcgggaataccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacctacttgctagtgtggatagtgaggaggttcgacaatactgt-agggaacaggggtggataattccagaaacatcgaccaatgtggaacgccacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattccggtgcacctaagcaagctctcaaaaaacctgtgctaagaacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaagggcatttcactatgttaggagtgcgagatcgcttagctattttgccacgccactcgcaaccaggaaaaactatttgggtggagcacaagttaatcaatgtgttggatgctgttgaattggtggatgagcagggtgtaaacttggaactcacactagtaaccttggacaccaacgaaaagtttagggatgtcaccaagtttattccagagacgatcaccggggcaagtgacgcaaccttgatcatcaacactgagcatatgccctcaatgttcgttccagtgggtgatgtcgtacaatatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggtgtggtcacctcagtaggcaagattattggaattcatatcggtgggaatggtcgccaaggtttctgtgctggactgaagagaggttactttgccagtgaacagggagagatccaatggatgaagcccaacaaagaaactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagcaaggatcccagactcgaggttgactttgagcaagccttgttttccaagtatgtgggaaacaccctgcacgagcctgacgaatacgtgacacaggctgctctccactacgcaaaccagctaaagcaattagacataaatattaacaagatgagcatggaggaagcatgctatggcactgagtatctagaggccatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagagatactaccaaaatgaagttctacatggataaatatgggttagatttgccctattccacctatgtgaaggatgaacttagatccttagacaagattaagaaagggaaatcccgtttgattgaagccagtagtctaaatgactcagtctatcttaggatgactttcgggcatctctatgaaactttccatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagcaaattaccgatcctgttgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggttcagagctttggaggtggttctccgagagatcggctactcagaggaggctgtatcattaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgctccggtacttccatcttcaactccatgatcaacaacataataatcagaaccctcttgattaaaacttttaaggggatcgatttagatgagttgaatatggtagcttatggagatgatgtgttagctagttatccattccctattgattgctcggagttagccaaaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgcttcaacgaagtcacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcccgttggaagagccttggccataccaaattttgagaatttgagaagaaattggcttgagttgtttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC755231.1_Coxsackievirus_A16_isolate_AH10-12_polyprotein_gene_complete_cds
-----aaaaaagcaggctttaaaa--cag-cct-gtgggttg-t-ccccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---c---cccc-t-----aagca-gtaacttagaagc------------tttgcacaatcac-gaccag-tagtgggcgtggcgcgccagccacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggccgatgagtcactgta-aaccccacaggcgactgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----ttcatt-ggatacgtccctc-----ttagtct--------------caaaaccattcaa-actcttgactatatattgctccttaa--ctgtgaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactccgcatcgg-agggttcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgtcaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgcggttatagcgaccgtgtagctcagcttaccattgggaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacagcagtcgacaaacccacacgacctgacgtgtcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacggaggtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatcagggttttgcgtgcacgttcagtgcaatgcaagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactattgcaggagggactgggaacg------agaactctcatcccccttacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtactagatgcaggaatccctttgagccaattaactgtgtgtccacatcagtggattaacttaagaactaacaattgtgcaaccattatagttccatacatgaacacagttccctttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtaccattggatttcaacacaggcgccacatctgaaattcccattacagttaccatagctcccatgtgcgcggagtttgcgggtctgcgccaggcagtaaagcaaggtataccaacagagctcaaacctggtaccaatcagtttctcactactgatgatggtgtttccgcaccaattctgccaggcttccatccaactccacctatacacataccaggagaggtacacaacctattggaaatatgcagagtggagaccattctggaagtcaacaa----------cctaaagaccaatgaaaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgaattatgtgctgcttttagagcagatcctggaagagatggtccgtggcagtccacaatactaggccaactctgcaggtactacacccagtggtcgggttcactggaggtgacattcatgttcgcaggctcatttatggctacaggtaagatgctcatcgcctataccccacctgggggaaatgtgcccgcggacagaatcacagcaatgctgggaacacatgtgatctgggactttggattacagtcttctgtgacgttggttgtgccatggattagtaatacacactacagggctcatgcccgcgctgggtactttgattattacaccactggcatcataaccatatggtatcaaactaactatgtagtacccattggtgctcccactacagcgtacatcgtggctctggcagcagctcaggacaatttcactatgaaactatgcaaggatacggaggacattgagcaaacagccaatatacaaggggatcct--------attgcagatatgattg---accagactgt--------------------------gaacaatcaagtgaatcgctccttgactgcgttgcaagtactg--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcagagacaggggcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtattgaaccatcactccacgcaggagacagccattgggaatttctttagccgtgccggtcttgtcagcattattacaatgcccaccacgggtacaca-aaatacagatggttatgttaattgggacattgacttgatgggatatgctcagctgcggcggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacccacttccagagactcgtttgcttggcagactgctaccaacccatctgtgtttgtgaaaatgacggaccctccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttacgatggttatcccaccttcggagagcacctccaagcaaatgacttggattatggccaatgcccgaacaatatgatgggcacttttagcattaggacagtagggactgagaaatcaccacactccatcaccctgagggtatacatgagaatcaaacacgttagggcatggattccaagacctctgaggaatcaaccctatctgtttaagaccaatccaaattataaaggaaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaattatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggagtatactattgcaactccaaaaggaaacactacccggttagtttcaccaagcccagtctggtatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggtatcctcaggtgccagcatggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgccgacgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactacatcaaa-ggcctcggtgatgcttttggtatgggcttcactgatgcagtgtccagggaagtagaggcattgaagaactatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaaactaatctcagctttagtcatagtcgttaggagtgactatgatatggtcaccctcacggctacgctagctttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattctcggtattcccatagtgcaaaagcagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcgaaagggcttgagtggatttctagtaaaatcagcaagttcatcgattggcttaaggaaaagattattccggccgctaaggagaaagttgaattcttgaacaacctgaagcagcttccc-ctgttggagaaccaaatctcaaatcttgaacaatctgccgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactatatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccaggaacaggtaagtcacttgctacgggcatcatagctagagctattgctgacaaataccattctagcgtttactcactccctccagacccagatcattttgatggatacaagcaacaagtagtcactgttatggacgatctctgtcaaaacccagatggaaaggacatgtccctattttgccagatggtttctacagtagactttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaactaatgccagcaacattgtagtccccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggtcgtctcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaacttcaagagatgcagcccactagtgtgtggcaaggctattcaattaagagacaggaagtctaaagtaagatatagtattgacaccgtagtgtcagagttaatcagagagtataataataggtctgctatcgggaataccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgtcatcagtgacctacttgctagtgtggatagtgaggaggttcgacaatactgt-agggaacaggggtggataattccagaaacatcgaccaacgtggaacgccacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattccggtacacctaagcaagctctcaaaaagcctgtgttaagaacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacattttactatgttaggagtgcgagatcgcctagctattttgccacgccactcgcaaccaggaaaaactatttgggtggagcacaagttaatcaatgtactggatgctgttgaattggtggatgagcaaggtgtaaacttggaactcacactggtaactttggacaccaacgaaaagtttagggatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttgatcatcaacactgagcacatgccctcaatgttcgttccagtgggcgatgttgtacaatatggatttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggtgtggttacctcagtcggcaagattattggaattcatatcggtgggaatggtcgccaaggtttctgtgctggactgaagagagggtactttgccagtgaacagggagagatccaatggatgaagtccaataaagaaactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaactagcaaggatcccagactcgaggtcgactttgagcaagccttgttttccaagtatgtgggaaacaccctgcatgagcctgacgagtacgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagcatggaggaagcatgctatggcactgaatatctagaggccatagatttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagagatactactaagatgaagttctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgaactcagatccttagacaagattaagaaagggaaatcccgtttgattgaagccagtagtttgaatgactcagtctatcttaggatgactttcgggcacctctatgaaactttccatgccaacccggggactgtgactggatctgcagtagggtgtaatcctgatgtgttctggagcaaattaccgatcctgttgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggttcagagctttggaggtggttctccgagagatcggctactcagaggaggctgtatcattaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattctatgattaacaacataataatcagaaccctcttgattaaaacttttaaggggatcgacttggatgagttgaatatggtagcttatggagatgatgtgctagctagttatccattccctattgactgctctgagttagctaaaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagttacctgggaaaacgccacattcttaaagagaggcttcctgccggatcaccaattcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgtaacactcaggatcacgtgcgctctctgtgcctcttagcatggcataatggaaaggaggaatatgaaaaatttgtgagtacgattagatcagttcccattggaaaagccttggccataccaaattttgagaacttgagaagaaattggctcgaattgtttt--a--atatacagttt-------------------------aaa----------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaaa-----------------------------------
>JX068832.1_Human_coxsackievirus_A16_strain_BJ09/06_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct--cc---cccc-t-----aagca-gtaacttagaagc------------tttgcacaatcac-gaccag-tagtgggcgtggcgcgccagccacgtctcgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctccaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcatcctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----ttcatt-ggatacgtccctc-----ttagtct--------------caaagccattcaa-actcttgactatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccaacgatccgggtcacatgagaactcaaactccgcatcgg-agggttcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatacgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgcggttatagtgatcgtgtggctcagcttaccattgggaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacagcagtcgacaaacccacacgacctgacgtgtcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaagttccctgatgttttgacagaggtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatcagggttttgcgtgcacgttcagtgcaacgcaagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggactgggaacg------agaattctcatcccccttatgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgtccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccctttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtaccattggatttcaacgcgggcgccacatctgaaattcccattacagttaccatagctcccatgtgcgcggagtttgcgggtctgcgccaggcagtaaagcaaggtataccaacagagctcaagcctggtaccaatcagtttctcactactgatgatggcgtttccgcaccaattctgccaggtttccatccaactccacctatacacataccaggagaagtacacaacctattggaaatatgcagagtggagaccattctggaagtcaacaa----------cctaaagaccaatgaaaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgaattatgtgctgcccttagagcagaccctggaagagatggtccgtggcagtccacaatactaggccaactctgcaggtactacacccagtggtcgggttcactggaggtgacattcatgtttgcaggctcattcatggctacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcccgcggacagaatcacagcaatgctaggaacacatgtgatctgggactttggattacagtcttctgtgacgttggtcgtgccatggattagtaatacacactacagggcacacgcccgcgctgggtactttgattattacaccactggcatcataaccatatggtatcaaactaactatgtagtacccattggtgctcccactacagcgtacatcgtggctttggcagcagctcaggacaattttactatgaaactatgcaaggatacggaggacattgagcaaacagctaatatacaaggggatcct--------attgcagatatgattg---accagactgt--------------------------gaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgtcgtaccagcactacaagccgcggagacaggggcgtcgtccaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttctttagccgcgccggtcttgtcagcattattacgatgcccaccacgggtacaca-aaatacagatggttatgttaattgggacattgacttgatgggatatgctcagctgcggcggaaatgcgaattgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacccacttccagagactcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggaccctccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttacgatggttatcccaccttcggagagcacctccaagcaaatgacttggattatggccaatgcccgaacaatatgatgggcacttttagcattaggacagtggggactgagaagtcaccacactccatcaccctgagggtatacatgagaatcaaacacgttagggcatggatcccaagacctctgaggaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcaccagcaccagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaattatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggagtatactattgcaactccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggtatcctcaggtgccagcatggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtatctgactacatcaaa-ggcctcggtgatgcttttggtatgggcttcactgatgcagtgtccagggaagtagaggcattgaagaactatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaaactaatctcagctttagtcatagtcgttaggagtgactacgatatggtcaccctcacggctacgttagctttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggtattcccatagtgcaaaagcagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcgaaagggcttgagtggatttctagtaaaatcagcaagttcatcgattggcttaaggaaaagattattccggccgctaaggagaaagttgaattcttgaacaacctgaagcagcttccc-ctgttggagaaccaaatctcaaaccttgaacaatctgctgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccaggaacaggtaagtcacttgctacgggcattatagctagagctattgctgacaaataccattccagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaactaatgctagcaacattgtagtccccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggtcgtctcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaacttcaagagatgcagcccactagtgtgtggcaaggctattcaattaagagacaggaagtctaaagtaagatatagtattgataccgtagtgtcagagttaatcagagagtataataataggtctgctatcgggaataccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---ggccttgaagaaaaaccggccccagatgccatcagtgacctacttgctagtgtggatagtgaggaggttcgacaatactgt-agggaacaggggtggataattccagaaacatcgaccaacgtggaacgccacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattccggtgcacctaagcaagctctcaaaaagcctgtgttaagaacagccacagtccaaggaccgagcttagactttgccttgtccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacattttactatgttaggagtgcgagatcgcctagctattttgccacgccactcgcaaccaggaaaaactatttgggtggagcacaagttaatcaatgtattggatgctgttgaattggtggatgagcaaggtgtaaacttggaactcacactagtaaccttggacaccaacgaaaagtttagggatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttgatcatcaacactgagcacatgccctcaatgttcgttccagtgggcgatgttgtacaatatgggtttctaaacctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggtgtggtcacctcagtcggcaagattattggaattcatatcggtgggaatggtcgccaaggtttctgtgctggactgaagagaggttactttgccagtgaacagggagagatccaatggatgaagtccaacaaagaaactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagcaaggatcccagactcgaggttgactttgagcaagccttgttttccaagtatgtgggaaacaccctgcatgagcctgacgagtacgtgacacaggctgccctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagcatggaggaagcatgctatggcactgaatatctagaggccatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagagatactaccaaaatgaagttctacatggataaatatgggttagatttgccctattccacctatgtgaaagatgaactcagatccctagacaagattaagaaagggaaatcccgtttgattgaagccagtagtttaaatgactcagtctatcttaggatgactttcgggcacctctatgaaactttccatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagcaaattaccgatcctgttgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagagggggctgtgtcattaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattctatgattaacaacataataatcagaaccctcttgattaaaacttttaaggggatcgacttggatgagttgaatatggtagcttatggagatgatgtgttagctagttatccattccctattgactgctcggagttagccaaaactggtaaagagtatggattgacaatgacacccgctgataagtcaccttgctttaatgaagtcacctgggaaaatgccacattcttaaagagaggcttcctgccggatcaccaattcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcatggcataatgggaaggaggaatatgagaaatttgtgagtacaattagatcagttcccgttggaaaagccttggccataccaaattttgagaacttgagaagaaattggctcgaattgtttt--a--atatacagttt-------------------------aaa----------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatacgca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX507808.1_Human_coxsackievirus_A16_strain_BJ1208_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccag-tagtgggcgtggcgcgccagccacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-ttacgcggtcgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgta-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actcct-cattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaatagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaagccattcaa-gctcttgactatatactacttcttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggttcgaccataaattacacaactataaactattacaaggatgcatacgctgcaagtgcggggcgacaggatatgtcccaggacccaaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctcaagtctccaagcgctgaggcatgcggttatagtgatcgtgtggctcaacttaccattgggaactctaccattacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcgacagcagtcgacaaacccacacgacctgacgtgtcagtgaacagatttttcacgttagacactaaatcttgggctaagg------------------actcaaagggttggtattggaaattccctgatgttttgacggaggtaggtgtctttggtcaaaacgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgcaagtaaatttcaccaaggcgctttactggtggctgtactgcctgagtatgtactcggcactatcgcaggagggactgggaacg------agaattctcatcccccttacgccactacacagcctggccaggttggtgcagttctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgtccacatcagtggattaacttaagaactaataattgtgcaaccatcatagttccatatatgaatacagttcccttcgactcagccctcaaccactgcaactttggtctactggtcatcccggtggtaccattggatttcaacgcaggcgctacatctgaaattcccattacagttaccatagctcccatgtgcgcggaattcgcgggtctgcgccaggcagtaaagcaaggtataccgacagagctcaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaaccccacctatacacataccaggagaagtgcacaacctattggaaatatgcagagtggagaccattctggaagttaacaa----------cctaaagactaatgaaaccacccct------atgcagcgcttgtgctttccggtgtcggtgcagagca------aaacgggcgaattatgtgctgcctttagagcagaccctgggagagatggcccgtggcagtctacaacactaggccaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggctacaggtaaaatgctcatcgcctacacccctcctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtaatctgggactttggattacagtcctctgtgacgttggtcgtaccatggattagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtggtacccattggtgctcccactacagcgtacatcgtggctttggcagcagctcaggacaatttcactatgaaactatgcaaggatacggaggacattgagcaaacagctaatatacaaggggatcct--------attgcagatatgattg---atcagactgt--------------------------gaacaatcaagtgaatcgctccttgactgcgttgcaagtactg--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagctgcggagacaggggcgtcgtccaatgctagtgacaagaatctcattgagactaggtgtgtgttgaaccatcactccacacaggagacagctattgggaacttctttagccgtgccggtcttgtcagcattattacaatgcccaccacgggcacaca-aaatacagatggttatgttaattgggacattgatttgatgggatatgcccagctgcggcggaaatgcgaattgtttacctacatgcgctttgatgctgaattcacatttgtcgtggccaaacccaatggtgagttagtcccccaattattgcaatacatgtacgtcccaccaggggctccgaaacctacttccagagattcgtttgcttggcagactgctaccaacccatctgtgtttgtgaaaatgacagaccctccagcccaagtgtcagtccccttcatgtcaccagctagtgcataccagtggttttatgatggttatcccaccttcggagagcacctccaagcaaatgacttggattatggccaatgtccgaacaat---atgggcacttttagcattaggacagtagggactgagaagtcaccacactccatcaccctaagggtatacatgagaatcaaacacgttagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgacattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaattatagggtggtgaatcgacacctcgccacacacaacgactgggcaaaccttgtgtgggaagatagctctagggacttgttagtctcttccaccactgcccaggggtgcgacactatcgctaggtgcaattgtcaaactggagtatactattgcagctccaaaagaaaacactacccggttagcttcaccaagcccagtctgatatttgtgggagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggtatccttaggtgccagcatggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggttggatgaggaagcaatggagcaaggagtgtctgactacatcaaa-ggcctcggtgatgcttttggtatgggcttcactgatgcagtgtccagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttagtgaaattaatctcagctttagtcatagtcgtcaggagtgactatgacatggtcaccctcacagctacgctagctttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggtattcccatagtgcaaaagcaaagcgcttcatggctaaagaagtttaatgacatggccaacgctgcgaaagggcttgagtggatttctagcaaaatcagcaagttcatcgattggcttaaggaaaagattattccggccgctaaggagaaagttgaatttttgaacaacctgaagcagcttccc-ctgttggagaaccaaatctcaaatcttgaacaatctgctgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccaggaacaggtaagtcacttgctacgggcattatagctagagctattgctgataaataccattctagcgtctactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgtcatggacgatctctgtcaaaacccagatggaaaggacatgcccctattctgccaaatggtttctacagtggactttataccacccatggcatcattggaggagaaaggagtgtctttcacctctaagttcgtcattgcatcaaccaatgctagcaacattgtggttcccacagtctcagattctgatgcgattcgcaggcggttttatatggactgtgatatagaagtgacagactcctacaagacggatcttggtcgtctcgacgcgggtagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgtagcccactagtgtgtggcaaggccattcaattaagagataggaagtctaaagtaagatatagtattgacactgtagtgtcagagttaatcagagagtataataataggtctgctatcgggaataccatagaagccctcttccaaggaccccctaagttcaggcctayaagaatt---agccttgaagaaaagccggccccagatgccatcagtgaccttcctgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacatcaaccaatgtggaacgccacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctaagaacagccacagtccaaggaccgagtttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccagggacatttcactatgttaggagtgcgagaccgcttagctattttgccacgccactcgcaaccaggaaaaactatttgggtggagcacaagttaatcaatgtgttggatgctgttgaattggtggatgagcaaggtgtaaacttggaactcacactagtaaccttggacaccaacgaaaagtttagggatgtcaccaagtttattccagagacgatcaccggggcaagtgacgcaaccttgatcatcaatactgagcatatgccctcaatgttcgttccagtgggtgatgtcgtacaatatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaacttccccacgaaggcaggacagtgtgggggcgtggtcacctcagtaggcaagattattggaattcatatcggtgggaatggtcgccaaggtttctgtgctggactgaagagaggttactttgccagtgaacagggagagatccaatggatgaagcccaacaaagaaactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgactttgagcaagccttgttttccaagtacgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactacgcaaaccagctaaagcaattagacataaacattaacaagatgagcatggaggaagcgtgctatggcactgaatatctagaggccatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagagataccaccaaaatgaagttctacatggataaatatgggttagatttgccctattccacctacgtgaaagatgaacttagatccttagacaagattaagaaagggaaatcccgtttgattgaagccagtagtctaaatgactcagtctatcttaggatgactttcgggcatctctatgaaactttccatgccaacccggggactgtgactgggtctgcagtggggtgtaatcctgatgtgttctggagcaagttaccgatcctgttgccaggatcgctctttgcatttgactattcagggtatgatgctagtctcagcccagtgtggttcagagccttggaggtggttctccgagagatcggctactcagaggaggctgtatcattaatagaagggatcaaccacacccatcatgtgtatcggaacagaacatattgtgtccttggtggaatgccttcaggttgctccggcacttccatcttcaactccatgatcaacaacataataatcagaaccctcttgattaaaacttttaaggggatcgatttagatgagttgaatatggtagcttatggagatgatgtgttagctagttatccattccctattgattgctcggagttagccaaaactggtaaagagtatggattgacaatgacacccgctgataagtcaccttgctttaacgaagtcacctgggaaaatgccacattcttaaagagaggcttcttgccagatcaccaattcccatttcttatccaccccaccatgtccatgagggagatccacgagtccattcgttggactaaagatgcacgtaacactcaggatcacgtgcgctccctatgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcccattggaagagccttggccataccaaattttgagaacttgagaagaaattggctcgagttgtttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF193624.1_Coxsackievirus_A16_isolate_HN09-02_complete_genome
---------------------aaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattttgcgggatctttgtgcgcct-g-ttttata-----accct--cc---ccct-t-----aagca-gcaacttagaagc------------tttgtacgaccac-gaccag-tagtgtgcgtggcgcgccagccacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-ttacgcggtcgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcagagtgtttcgctcagca--ctt--cccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctggatacggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----tacctg----tttatt-ggatacgtctccc-----ttaatcc--------------caaagccattcaa-actcttgactatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactccgcatcgg-agggttcgaccataaattacacaaccataaactactataaggatgcatacgctgcaagtgcggggcgccaagacatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctcaagtcatcaagcgctgaggcatgcggttatagtgatcgtgtggctcagcttaccattgggaactctaccatcacgacacaggaagcagctaatatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacagcagtcgacaaacccacacgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------actcaaagggttggtattggaaattccctgatgttttgacagaggtaggtgtttttggccaaaacgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgcaagtaagtttcaccaaggcgctttactagcggctgtgctgcctgagtatgtactcggcactatcgcaggagggactgggaacg------agaattctcatcccccctacgctactacacagcctggtcaggttggtgcggttctgacgcacccctacgtgctagatgcagggatccctttgagccaattaactgtgtgtccacatcagtggattaacttaagaactaacaattgtgcaaccattatagttccatatatgaacacagttcccttcgattcagctctcaaccactgcaactttggtctactggtcatcccggtagtaccactggatttcaacgcaggcgccacgtctgaaattcccattacagttaccatagctcccatgtgcgcggaatttgcgggtctgcgccaggcagtaaagcaaggtataccaacagagctcaagcctggtaccaaccagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccacctatacacataccaggagaagtacacaacctattggaaatatgcagagtggagaccattctggaagttaacaa----------cctaaagactaatgaaactaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------agacgggcgaattatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactaggccaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggctacaggtaaaatgctcatcgcctacacccctcctgggggaaatgtgcccgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggattacagtcttctgtgacgttggtcgtgccgtggattagtaatacacactacagggcacacgcccgcgctgggtactttgactattacactactggcatcataaccatatggtatcaaactaactatgtagtacccattggtgctcccactacagcgtacatcgtggctttggcagcagctcaggacaatttcactatgaaactatgcaaggatacggaggacattgagcaaacagctaatatacaaggggatcct--------attgcagatatgattg---atcagactgt--------------------------gaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagctgcggagacaggggcgtcgtccaatgctagtgacaagaatctcattgagactaggtgtgtgttgaaccatcactccacgcaggagacagccattgggaatttctttagccgtgccggtcttgtcagcattattacaatgcccaccacgggcacaca-aaatacagatggttatgttaattgggacattgacttgatgggatatgctcagctgcggcggaaatgcgaattgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacctacttccagagattcttttgcttggcagactgctaccaacccatctgtatttgtgaaaatgacagaccctccagctcaagtgtcagtccctttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggagagcacctccaagcaaatgatttggattatggccaatgcccgaacaatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccatcaccctaagggtatacatgagaatcaaacacgttagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcaccagcactagtagagagaagat---aacaac---------------------------------------gttggga------------------------------------------gagtttgggcagcaatcaggcgccatatatgtgggcaattatagggtggtgaatcgacacctcgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacactattgctaggtgcaattgtcaaaccggagtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggccactcggaacctggtgactgtggtggtatcctcaggtgccagcatggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtccgactacatcaaa-ggcctcggtgatgctttcggtatgggcttcactgatgcagtgtccagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaaggtcttgaagaacttggtgaaattaatctcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggccacgctagctttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggtattcccatagtgcaaaagcagagcgcttcatggctaaagaagtttaatgatatggctagcgctgcgaaagggcttgagtggatttctagtaaaatcagcaagttcatcgattggcttaaggaaaagattatcccggccgctaaggagaaagttgaattcttgaacaacctgaagcagcttccc-ctgttggagaaccaaatctcaaatcttgagcaatctgctgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccaggaacaggtaagtcacttgctacgggcattatagctagagccattgctgacaaataccattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgtcatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaaccaatgctagcaacattgtagtccccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggtcgtctcgatgcaggcagggccgctaaactttgcacagaaaataacactgctaacttcaagagatgcagcccactagtgtgtggcaaggccattcaattaagagataggaagtctaaagtaagatatagtattgacactgtagtgtcagagttaatcagagagtataataataggtctgctatcgggaataccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---aaccttgaagaaaagccggccccagatgccatcagtgacctgcttgctagtgtggatagtgaggaggttcgacaatactgt-agggaacaggggtggataattccagaaacatcgaccaatgtggaacgccacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattccggtgcacctaagcaagctctcaaaaagcctgtgttaagaacagccacagtccaaggaccgagcttagacttgcctatcccattcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcttagctattttgccacgccactcgcaaccaggaaaaactatttgggtggagcacaagttaatcaatgtgttggatgctgttgtattggtggatgagcaaggtgttaacttggaactcacactagtaaccttggataccaacgaaaagtttagggatgtcaccaagtttattccagagacgatcatcggggcaagtgacgcaaccttgatcatcaatactgagcatatgccctcaatgttcgttccagtgggtgatgtcgtacaatatggatttctaaatctcagcggcaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggtgtggttacctcagtcggcaagattattggaattcatatcggtgggaatggtcgccaaggtttctgtgctggactgaagagaggttacttcgccagtgaacagggagagatccaatggatgaagcccaacaaagaaactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagcaaggatcccagactcgaggttgactttgagcaagccttgttttccaagtatgtggggaacaccctgcatgagcctgacgagtacgtgatacaggctgctctccactacgcaaaccagctaaagcaattagacataaacattaataagatgagcatggaggaagcatgctatggcactgaatatctagaggccatagacttgcacaccagtgcggggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagggatactaccaaaatgaaattctacatggataaatataggttagacttgccctattccacctatgtgaaagatgaacttagatctttagacaagattaagaaagggaaatcccgtttgattgaagccagtagtctaaatgactcagtctatcttaggatgactttcgggcatctctatgaaactttccatgccaacccggggactgtgactgggtctgcagtagggtgcaatcctgatgtgttctggagcaaattgccgatcctgttgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggttcagagctttggaggtggttctccgagagatcggctactcagaggaggctgtatcattaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaacaacataataatcagaaccctcttgattaaaacttttaaggggattgatttagatgagttgaatatggtagcttatggagaggatgtgttagctagttatccattccctattgactgttcggagttagccaaaactggtaaagggtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagtcacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcccattggaagagccttggccataccaaattttgagaacttgagaagaaattggctcgagttgtttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF193620.1_Coxsackievirus_A16_isolate_ZJ08-01_complete_genome
---------------------aaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---c---cccc-t-----aagca-gtaacttagaagc------------tttgtacagtcac-gactag-tagtgggcgtggcgcgccagccacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtaacaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtag-cccatgggacgctctaatacggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actcct-tactggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaagccattcaa-actcttgactatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccggatcacatgagaactcaaactccgcatcgg-agggatcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctcaagtctccaagcgctgaggcatgcggttatagtgatcgtgtggctcagcttaccattgggaactctaccatcacgacacgggaagcagctaacatagttatagcctatggggagtggctcgagtactgcccagacacagatgcaacagcagtcgacaaacccacacgacccgacgtgtcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgacgttttgacagaggtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatctgggttttgtgtgcacgttcagtgcaacgcaagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggactgggaacg------agaattctcatcccccttacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgtccacatcagtggattaacttaagaaccaataattgtgcaaccattatagttccatatatgaacacagttccctttgactcagctctcaaccactgcaactttggtctactggtcattccggtggtaccgttggatttcaacgcaggtgccacatctgaaattcccattacagttaccatagctcctatgtgcgcggaatttgcgggtctgcgccaggcagtaaagcaaggtataccaacagagctcaagcctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccacctatacacataccaggagaagtacacaatttattggaaatatgcagagtggagaccattctggaagtcaacaa----------cctaaagaccaatgaaaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgaattatgtgctgcctttagagcagaccctggaagggatggtccgtggcagtccacaatactaggccaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggctacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcccgcggacagaattacagcaatgctaggaacgcatgtgatctgggactttggattacagtcctctgtgacgttggtcgtgccatggattagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactacgtagtacccattggtgctcccactacagcgtacatcgtggctttggcagcagcgcaggacaatttcactatgaaactatgcaaggatacggaggacattgagcaaacagctaatatacaaggggatcct--------attgcagatatgattg---accagactgt--------------------------gaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtccaatgctagtgacaagaacctcattgaaactagatgtgtgctgaaccatcactccacgcaggagacagccattgggaatttctttagccgtgccggtcttgtcagcattattacaatgcccaccacgggtacaca-aaatacagatggttatgttaattgggacattgacttgatgggatatgctcagctgcggcggaaatgcgaattgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacctacttccagagattcgtttgcttggcagactgctaccaacccatctgtgtttgtgaaaatgacagaccctccggctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggagagcatctccaagcaaatgacttggattatggccaatgcccgaacaatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccatcaccctgagggtatacatgagaatcaaacacgttagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcactagcactagtagagataagat---aacaac---------------------------------------gttggga------------------------------------------gagtttggacagcaatcaggcgccatatatgtgggcaattatagggtggtgaatcgacaccttgctacacacaacgactgggcaaaccttgtgtgggaagacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggagtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaggctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggccactcggaacctggtgactgtggtggtatcctcaggtgccagcatggtgtagtaggaattgtctccactggtggaaatggtcttgtagggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgatgcttttggtatgggcttcactgatgcagtgtccagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaaactaatctcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggtattcccatagtgcaaaagcagagcgcttcatggctaaagaagtttaacgatatggctaacgctgcgaaggggcttgagtggatttctagtaaaatcagcaagttcatcgattggcttaaggaaaagattattccggccgctaaggagaaagttgaattcttgaacaacctgaagcagctcccc-ctgttggagaaccaaatctcaaatcttgaacaatctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctatgcagttgaagccaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccaggaacaggtaagtcacttgctacaggcattatagctagagctattgctgacaaataccattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaaccaacgctagcaacattgtagtccccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggtcgtctcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaacttcaagagatgcagcccactagtgtgtggcaaggccattcaattgagagataggaagtctaaagtaagatatagtattgacactgtggtgtcagagttaatcagagagtataataataggtccgctatcgggaataccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacctacttgctagtgtggatagtgaggaggttcgacaatactgt-agggaacaggggtggataattccagaaacatcgaccaatgtggaacgccacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattccggtgcacctaagcaagctctcaaaaagcctgtgctaagaacagccacagtccaaggaccgagcttagactttgctctttccctcctaaggcgtaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagctattttgccacgccactcgcaaccaggaaaaactatttgggtggagcacaagttaatcaatgtgttggatgctgttgaattggtggatgagcaaggtgtaaacttggaactcacactagtaaccttggacaccaacgaaaagtttagggatgtcaccaagtttattccagagacgatcaccggggcaagtgacgcaaccttgatcatcaacactgagcatatgccctcaatgttcgttccagtgggtgatgttgtgcaatatggatttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggtgtggttacctcagttggcaagattattggaattcatatcggtgggaatggtcgccaaggtttctgtgctggactgaagagaggttactttgccagtgaacagggagagatccaatggatgaagtccaacaaagaaactgggagactgaacattaatggcccaacccgtaccaaattggaacccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaaccaacaaggatcccagactcgaggttgactttgagcaagccttgttttccaagtatgtgggaaacactctgcacgaacctgacgagtacgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagcatggaggaggcatgctatggcactgaatatctagaggccatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgaacttagatccttagacaagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctatcttaggatgactttcgggcatctctatgaaactttccatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagcaaattaccgatcctgttgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggttcagagctttggaggtggttctccgagagatcggctactcagaggaggctgtatcattaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaactccatgatcaacaacataataatcagaaccctcttgattaaaactttcaaggggatcgatttagatgagttgaacatggtagcttatggagatgatgtgttagctagttatccattccctattgactgctcggagttagccaaaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagtcacttgggaaaatgtcacattcctaaagagaggcttcctgccagatcaccaattcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagatgcacgcaacactcaggatcacgtgcgctctctgtgtctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcccattggaaaagctttggccataccaaattttgagaacttgagaagaaattggctcgagttgtttt--aatatatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctgtc------g-g-----aaaggat-g-actg--------gtgggggtaaatttgt-ta-taaca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF193627.1_Coxsackievirus_A16_isolate_FJ09-02_complete_genome
---------------------aaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct--cc---cccc-t-----aagca-gtaacttagaagc------------tttgcacaatcac-gaccag-tagtgggcgtggcgcgccagccacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgttacccggctaaccacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctggttagtagtcctccggcccctgaatgcggctaatcctaactgcagagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----ta-cta----ttcatt-ggatacgtccctc-----ttagtct--------------caaagccattcaa-actcttgactatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactccgcatcgg-agggttcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagatccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtcatcaagcgctgaggcatgcggttatagtgatcgtgtggctcagcttactattgggaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcgtgagtactgcccagacacagatgcaacagcagtcgacaaacccacacgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------actcaaagggttggtattggaaattccctgatgttttgacagaggtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatcagggttttgtgtgcacgttcagtgcaacgcaagtaaatttcaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggactgggaacg------agaattctcatcccccttacgctactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagatgcagggatccctttaagccaattaactgtgtgtccacaccagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccctttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtaccattggatttcaacacaggcgctacatctgaaattcccattacagttaccatagctcccatgtgcgcggagtttgcgggtttgtgccaggcagtaaagcaaggtataccaacagagctcaagcctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggcttccatccaaccccacctatacacataccaggagaagtacacaacctattggaaatatgcagagtggagaccattctggaagtcaacaa----------cctaaagaccaatgaaaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgaattatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactaggccaactctgcaggtactacacccagtggtcgggttcactggaggtgacattcatgtttgcaggctcattcatggctacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcccgcggacagaatcacagcaatgctagggacacatgtgatctgggactttggattacagtcttctgtgacgttggtcgtgccatggattagtaatacacactacagggcacatgcccgcgctgggtactttgattattacaccactggcatcataaccatatggtatcaaactaactatgtagtacccattggtgctcccactacagcgtacatcgtggctttggcagcagctcaggacaatttcactatgaaactatgcaaggatacggaggacattgagcaaacagctaatatacaaggggatcct--------attgcagatatgattg---accagactgt--------------------------gaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacaccgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtccaatgctagtgataagaatctcattgagactagatgtgtgttgaatcatcactccacgcaggagacagccattgggaatttctttagccgtgccggtctcgtcagcattattacaatgcccaccacaggtacaca-aaatacagatggttatgttaattgggacattgacttgatgggatatgctcagctgcggcggaaatgcgaattgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacccacttccagagactcgtttgcttggcagactgctaccaacccatctgtgtttgtgaaaatgacggaccctccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttacgatggttatcccaccttcggagagcacctccaagcaaatgacttggactatggccaatgcccgaacaatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccatcaccctgagggtatacatgagaatcaaacacgttagggcatggattccaagacctctgaggaaccaaccctatctgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcaccagcactagtagagataaaat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtaggcaattatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggagtgtactattgcaactccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgctagctgtgggtcactcggaacctggtgactgtggtggtatcctcaggtgccagcatggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaggaagcaatggaacaaggagtgtctgactacatcaaa-ggcctcggtgatgcttttggtatgggcttcactgatgcagtgtccagggaagtagaggcgttgaagaactatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaaactaatctcagctttagtcatagttgttaggagtgactatgatatggtcaccctcacggctacgctagctttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggtattcccatagtgcaaaagcagagcgcttcatggttaaagaagtttaatgatatggctaacgctgcgaaagggcttgagtggatttctagtaaaatcagcaagttcatcgattggcttaaggaaaagattattccggccgctaaggagaaagttgaattcttgaacaacctgaagcagcttccc-ctgttggagaaccaaatctcaaatcttgaacaatctgccgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccaggaacaggtaagtcacttgctacgggcattatagctagagctattgctgacaaataccattctagcgtttactcactccctccagaccctgaccattttgatggatacaagcaacaagtagtcactgttatggacgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaactaatgccagcaacattgtagtccccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggtcgtctcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaacttcaagagatgcagcccactagtgtgtggcaaggctattcaattaagagacaggaagtctaaagtaagatatagtattgacaccgtagtgtcagagttaatcagagagtataataataggtctgctatcgggaataccatagaagccctcttccagggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacctacttgctagtgtggatagtgaggaggttcgacaatactgt-agggaacaggggtggataattccagaaacatcgaccaacgtggaacgccacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattccggtgcacctaagcaagctctcaaaaagcctgtgttaagaacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaagtgcaaaccgaccaaggacattttactatgttaggagtgcgagatcgcctagctattttgccacgccactcgcaaccaggaaaaactatttgggtggagcacaagttaatcaatgtactggatgctgttgaattggtggatgagcaaggtgtaaacttggaactcacactagtaaccttggacaccaacgaaaagtttagggatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttgatcatcaacactgagcacatgccctcaatgttcgttccagtgggcgatgttgtacaatatggatttctagatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggtgtggtcacctcagtcggcaagattattggaattcatatcggtgggaatggtcgccaaggtttctgtgctggactgaagagagagtactttgccagtgaacagggggagatccaatggatgaagtccaataaagaaactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgcattctatgatgtgtttgagggtagcaaagaaccagcagtcttaaccagcaaggatcccagactcgaggttgactttgagcaagccttgttttccaagtatgtgggaaacaccctgcatgagcctgacgagtacgtgacacaggctgctctccactatgcaaaccagttaaagcaattggatataaacattaataagatgagcatggaggaagcatgctatggcactgaatatctagaggccatagatttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaaccactagagatactaccaaaatgaagttctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgaactcagatccttagacaagattaagaaagggaaatcccgtttgattgaagccagtggtctaaatgactcagtgtacctcagaatggcctttggtcacttgtacgagactttccacgcaaatccaggaaccataactggctcagctgtgggatgcaacccggatacattctggagtaaactaccaatcctgcttccaggttcactctttgcatttgattactcaggctatgatgctagtctcagtccagtctggttcagagctttggaggtggttctccgagagatcggctactcagaggaagctgtatcattaatagaagggatcaaccacacccatcatgtgtatcggaataggacatattgtgtccttggtggaatgccttcaggttgttccggtacctccatcttcaattctatgattaacaacataataatcagaaccctcttgattaaaacttttaaggggatcgacttggatgagttgaatatggtagcttatggagatgatgtgttagctagttatccattccctattgactgctcggagttagccaaaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagtcacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcccattggaaaagccttggccataccaaattttgagaacttgagaagaaattggctcgaattgtttt--a--atatacagttt-------------------------aaa----------------ctgaaccc-caccagaa----gtctggt------c-g-----tgctaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-a-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF193629.1_Coxsackievirus_A16_isolate_BJ10-03_complete_genome
---------------------aaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---c---cccc-t-----aagca-gcaacttagaagc------------tttgcacaatcac-gaccag-tagtgggcgtggcgcgccagccacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-ttacgcggtcgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtgatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--ttttttccctcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----ttcatt-ggatacgtccctc-----ttaatct--------------caaagccattcaa-actcttgactatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactccgcatcgg-agggttcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgcggttatagtgatcgtgtggctcagcttaccattgggaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacagcagtcgataaacccacacgacctgacgtgtcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgcaagtaaatttcaccaaggcgctttactggtggctgtgccgcccgagtatgtactcggcactatcgcaggagggactgggaacg------agaattctcatcccccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagatgcagggatccctttgagccaactaactgtgtgtccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccctttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtaccattggatttcaacgcaggcgccacatctgaaattcccattacagttaccatagctcccatgtgcgcggaattcgcgggtctgcgccaggcagtaaagcaaggtatactaacagagctcaagcctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccacctatacacataccaggagaagtacacaacctattggaaatatgcagagtggagaccattctggaagtcaacaa----------cctaaagaccaatgaaaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgaattatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactaggccaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggctacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcccgcggacagaatcacagcaatgctaggaacacatgtgatctgggactttggattacagtcttctgtgacgttggtcgtgccatggattagcaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtagtacccattggtgctcccactacagcgtacatcgtggctttggcagcagctcaggacaatttcactatgaaactatgcaaggatacggaggacattgagcaaacagctaatatacaaggggatcct--------attgcagatatgattg---accagactgt--------------------------gaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtccaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttctttagccgtgccggtcttgtcagcattattacaatgcccaccacgggtacaca-aaatacagatggttatgttaattgggacattgacttgatgggatatgctcagctgcggcggaaatgcgaattgtttacctacatgcgctttgatgctgaattcacatttgtcgtagctaaacccaatggtgtgctagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacctacttccagagattcgtttgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggaccctccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggagagcacctccaagcaaatgacttggattatggccaatgcccgaacaatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccatcaccctgagggtatacatgagaatcaaacacgttagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaattatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggagtatactactgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggtatcctcaggtgccagcatggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactacatcaaa-ggcctcggtgatgcttttggtatgggcttcactgatgcagtgtccagggaagtagaggcattgaagaactatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaaactaatctcagctttagtcatagtcgttaggagtaactatgacatggtcaccctcacggctacgctagctttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggtattcccatagtgcaaaagcagagcgcttcatggctaaagaagtttaatgacatggctaacgctgcgaaagggcttgagtggatttctagtaaaatcagcaagttcatcgattggcttaaggaaaagattattccggccgctaaggagaaagttgaattcttgaacaacctgaagcagcttccc-ctgttggagaaccaaatctcaaatcttgaacaatctgctgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccaggaacaggtaagtcacttgctacgggcattatagctagagctattgctgacaaataccattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaaccaatgctagcaacattgtagtccccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggtcgtctcgacgcaggtagggccgctaagctttgcacagaaaacaacactgctaacttcaagagatgcagcccactagtgtgtggcaaggccattcaattaagagataggaagtctaaagtaagatatagtattgacactgtagtgtcagagttaatcagagagtataataataggtctgctatcgggaataccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacctacttgctagtgtggatagtgaggaggttcgacaatactgt-agggaacaggggtggataattccagaaacatcgaccaatgtggaacgccacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattccggtgcacctaagcaagctctcaaaaagcctgtgctaagaacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaacctgaccaaggccatttcactatgttgggagtgcgagatcgcctagctgtcttgccacgccactcgcaaccaggaaggactgtttgggtggagcacaggttgatcggtgtgttggatgctgttgaattggtggatgagcaaggtgtagacttggagctcacactggtgaccttggacaccaatgaaaggtttggggatgtcaccaggtttgttccagagacgatcaccggggcaggtgacgcaaccttgatcatcgacactgggcatatgccctcaatgttcgttccagtgggcgatgttgtgcagtatggatttctagatctcagcggtaagcccacacaccgaaccatgatgtacgatttccccacggaggcaggacagtgtggaggtgtggtcacctcagtcggcaggatcgttggaattcatatcggtgggaatggtcgccaaggtttctgtgctggactgaggagaggttactttgccggtgaacagggagagatccaatggatgaagtccaacagagaggctgggagactgaacgttggtggcccaacccgtaccaagttggagcccagtgcattctatggtgtgtttgagggcagcagggaaccagcagtcttgaccggcagggatcccagactcgaggttgactttgagcaggccctgttctctaggtatgtgggaaacaccctgcacgagcctgacgagtgcgtgacgcaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagcatggaggaggcatgctatggcactgaatgtctggaggccgtggacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaggagacatgcttggcccaaccactggagatactaccaaaatgaaattctacatggatggatatgggttagacttgccctattccacctgcgtgagggatgaactcagatccttggacaagattaagagggggagatcccgtttgattgaagccagtagtttgaatgactcagtctatcttgggatgactttcgggcatctctgtgaaactttccatgccaacccggggactgtgactgggtctgcagtggggtgtagtcctgatgtgttctggggcggattgccgatcctgttgccaggatcgctctttgcatttgactattcgggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagaggaggctgtatcattaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtgggatgccttcaggttgttccggtacttccatcttcaattccatgatcaacaacataataatcagaaccctcttgattaaaacttttaaggggatcgatttggatgagttgaatatggtagcttatggagatgatgtgttagctagttatccattccctattgactgctcggagttagccaaaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagtcacccgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcccattggaaaagccttggccataccaaattttgagaacttgagaagaaattggctcgagttgtttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taac--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX986742.1_Human_coxsackievirus_A16_isolate_Wuhan0127/HuB/CHN/2011_complete_genome
------------------ttgaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcggaatctttgtgcgcct-g-ttttatg-----accct---t---cccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtggcgcgccagccacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggccgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----ttcatt-ggatacgtccctc-----ttagtct--------------caaagtcattcaa-actcttgactatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactccgcatcgg-agggttcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgcggttatagcgatcgtgtggctcagcttaccattgggaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacagcagtcgacaaacccacacgacctgacgtgtcagtgaacagatttttcacattagacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacggaggtaggtgtttttggccaaaacgctcagttccactacctgtatcgatcagggttttgcgtgcacgttcagtgcaacgcaagtaaatttcaccagggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggaggtactgggaacg------agaactctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccatcatagttccatatatgaatacagttccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtgccattagatttcaatacaggtgccacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcaggtctgcgccaggcggtaaagcaaggtataccaacagagctcaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagggtggagaccattctggaagtcaataa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtacagagca------aaacgggcgaattatgtgccgccttcagggcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcaggtattatacccaatggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacacgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaacacacactacagggcacacgcccgcgctgggcactttgactattacatcactggcatcataaccatatggtatcaaactaactatgtcgtgcccattggtgctcccactacagcatatatcgtggctttagcagcagctcaggataacttcactatgaaactgtgcaaggatacggaagacattgagcaaacggccaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtgtta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactgcaagctgcagagacaggggcgtcatctaatgctagtgacaagaatctcattgagactagatgtgtattgaaccatcactccacgcaggagacagccattgggaacttctttagccgtgccggccttgtcagcattattacaatgcccaccacaggtacaca-aaatacagacggttatgttaattgggacattgacttgatgggatatgctcagctgcggcggaaatgcgaattgtttacctacatgcgctttgatgcggaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacccacttccagagactcgtttgcttggcagactgctaccaacccatctgtgtttgtgaaaatgacggaccctccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttacgatggttatcccaccttcggagagcacctccaagcaaatgacttggattatggccaatgcccgaacaatatgatgggcacttttagcattaggacagtaggaactgagaagtcaccacactccatcaccctgagggtatacatgagaatcaaacacgttagggcatggattccaagacctctgaggaatcaaccctatctgtttaagactaacccaaattgtaaaggaaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaattatagagtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggatagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaactggagtgtactactgcaactccaaaaggaaacactacccggttagtttcaccaagcctagtctggtatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggagcctggtgactgtggtggcatcctcaggtgccagcatggtgtggtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtttgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatctaattggctcagaaagggctgttgagaagatcttgaagaacttggtgaagctaatctctgctttagtcatagtcgttaggagtgactatgatgtggtcaccctcacggctacgctagctttgattgggtgtcatggaagcccttgggcatggatcaaagcaaagacagcctctattctcggtattcccatagtgcaaaagcagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcgaaagggcttgagtggatttctagcaaaatcagcaagttcatcgattggcttaaggaaaagattatcccggccgctaaggagaaagttgaattcttgaacaacctgaagcagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgccgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctccccaggaacaggcaagtcacttgctacgggcattatagctagagctattgctgacaaataccattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggacgatctctgtcaaaacccagatggaaaggacatgtccctattttgccagatggtttctacagtagactttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaactaatgccagcaacattgtagtccccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggtcgtctcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaacttcaagagatgcagcccactagtgtgtggcaaggctattcaattaagagacaggaagtctaaagtaagatatagtattgacaccgtagtgtcagagttaatcagagagtacaataatagatctgctatcgggaataccatagaagccctcttccaagggccccctaagttcaggcccataagaatt---agtcttgaagaaaagccggccccagatgtcatcagtgacctacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacatcgaccaacgtggaacgccacctcaacagagcagtgttggtgatgcagtccatcactaccgtggttgcagttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattccggtgcgcctaagcaagctcttaaaaaacctgtgctaagaacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacattttactatgttaggagtgcgagatcgcctagctattctgccacgccactcgcaaccaggaaaaactatttgggtggagcacaagttaatcaatgtactggatgctgttgaattggtggatgagcaaggtgtaaacttggaactcacactagtaactttggacaccaacgaaaagtttagggatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgtcccagtgggcgatgttgtacaatatggatttctaaatctaagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggtgtggtcacctcagtcggcaagattattggaattcatatcggtgggaatggtcgccaaggtttctgtgctggactgaagagagggtactttgctagtgagcagggagagatccaatggataaagtccaataaagaaactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagcaaggaccccagacttgaggttgattttgagcaagccttgttttccaagtatgtgggaaacaccctgcatgagcctgacgagtacgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagcatggaggaagcatgctatggcactgaatatctagaggccatagatttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaagagagacatacttgacccaaccactagagatactaccaagatgaagttctacatggataaatatgggttagatttgccctattccacctatgtgaaagatgaacttagatccttagataagattaagaaagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagagggggctgtgtcactaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggtatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgataaaaacttttaaggggatcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagttatccattccctattgactgctcggagttagccaaaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccggatcaccaattcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctttgtgccttttagcatggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatacgca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC117317.1_Human_coxsackievirus_A16_strain_CA16/GD09/24_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacaccgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---cccc-t-----aagca-gcaacttagaagc------------tttgcacaatcac-gaccag-tagtgggcgtggcgcaccagccacgtcttgg-tcaagcacttctg-tatccccggactgagtaccaatagactgc-tcacgcggttgaaggagaaaatgttcgttacccggctaactacttcgagaaacc-tagtaacaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaatagagccattgtt-----tacctg----tttatt-ggatacgttcctc-----ttaatct--------------caaagccattcaa-actcttgactatatactgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggttcgaccataaattacacaactataaactactacaaagatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccaaagaaatttactgatcctgtcatggacgttatacatgagatggccccgccgctcaagtctccaagcgctgaggcatgcggttatagtgatcgtgtagctcaacttaccattgggaactctactatcacgacacaggaagcagctaacatagttatagcttatggggagtggcctgagtactgcccagacacagatgctacggcagtcgacaaacccacacgacctgacgtgtcagtgaacaggtttttcacgttggacactaaatcttgggccaagg------------------attcaaagggttggtattggaaattccctgatgttttgacagaggtgggtgtttttggtcaaaacgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgcaagtaaatttcaccaaggcgctctactggtggctgtactacctgaatatgtactcggcaccatcgcaggagggactgggaacg------agaattctcatcctccctacgccactactcagcctggccaggttggtgcagttttgacgcacccttacgtactagatgcagggatccccttgagccagttgactgtgtgcccacatcagtggattaacttaagaactaataattgcgcaaccattatagttccatatatgaacacagttccctttgactcagctctcaaccactgcaactttggtctattagtcattccggtggtaccattggatttcaatacaggcgccacatctgagattcccattacagtcaccatagctcccatgtgcgcggaatttgcgggtctgcgtcaggcagtaaagcaaggcataccaacagagctcaagcctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaatcctgccaggtttccatccaactccacccatacacataccaggagaagtacacaacctattggaaatatgcagagtggagaccattctggaagtcaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgaattatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactaggccaactctgcaggtactacacccaatggtcaggttcactggaggtaacattcatgtttgcaggctcattcatggctacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcccgcggacagaatcacagcaatgctaggaacacatgtaatctgggacttcggattacagtcttctgtgacgttggtcgtgccatggattagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtagtacccattggcgctcccactacagcgtacatcgtggctttggcagctgctcaggacaacttcactatgaaactatgcaaggacacggaggacattgagcaaacagctaatatacaaggggatcct--------attgcagatatgattg---accagactgt--------------------------gaacaatcaagtgaaccgctccttgactgcgttgcaagtgcta--------cctacagctgccaacactgaagcaagtagtcacaggttaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtctaatgccagtgataagaacctcattgagactaggtgtgtgttgaaccatcactccacgcaggagacagccattgggaatttctttagccgtgccggtcttgtcagcattattacgatgcccaccacgggtacaca-aaatacagatggctatgttaattgggacattgacttgatgggatatgctcagctgcggcggaaatgcgaattgtttacctacatgcgttttgacgctgaattcacatttgtcgtggccaaacccaatggcgagctagtcccccaattactgcagtacatgtatgtcccaccaggagctccgaaacctacttccagagattcgtttgcttggcagactgctaccaacccatctgtgtttgtgaaaatgacagacccaccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggagagcacctccaagcaaatgacatggattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagtggggactgaaaagtcaccacactccattaccttgagggtgtacatgagaattaaacatgttagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggcaa----tgatattaagtgcaccagcactagcagagataagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaattatagggtggtgaatcgacaccttgccacacacaatgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggagtatactattgcagctccaaaaggaaacactatccagttactttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcattcggagcctggtgactgtggtggtatcctcaggtgccagcatggtgtagtaggaattgtctccactggtggaaatggtcttatggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgatgcttttggcacgggcttcactgatgcagtgtccagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaaactaatctcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggccacactagctttgattgggtgtcatggaagcccttgggcatggatcaaggcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggctaatgctgcgaaagggcttgagtggatttctagtaagatcagcaagttcatcgattggctcaaggaaaagattattccggctgctaaggagaaagttgaattcttgaacaacctgaagcagcttccc-ctgttggagaaccaaatctcaaatcttgaacaatctgctgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccaggaacaggtaagtcacttgctacgggcatcatagctagagctattgctgacaaataccattctagcgtctactcgctccctccagacccagaccattttgatggatacaagcaacaagtggtcactgttatggatgatctctgccaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacctatggcatcattggaagagaaaggagtgtctttcacctccaagttcgtcattgcgtcaaccaatgctagcaacattgtagtccccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggtcgtctcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccactagtgtgtggcaaggccattcaattaagggataggaagtctaaagtgagatatagtattgacactgtagtgtcagagctgatcagagagtataataataggtctgctatcgggaataccatagaagccctcttccaaggaccccctaagtttaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacctacttgctagtgtggatagtgaggaggttcgacaatactgt-agggaacaggggtggataattccagaaacgtctaccaatgtggaacgccaccttaatagagcagtgttggtgatgcagtccatcgccaccgtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacccaagcaagctctcaaaaagcctgtgctaagaacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagctattttgccacgccactcgcaaccaggaaaaactatttgggtggaacacaagttaatcaatgtgttggatgctgttgaattggtggatgagcaaggcgtaaacttggaactcacactagtaaccttggacaccaacgaaaagtttagggatgtcaccaagtttattccggagacgatcaccggagcaagcgacgcaaccttggtcatcaacactgagcatatgccctcaatgttcgttccagtgggtgatgttgtacaatatgggttcctaaatctcagtggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggtgtggtcacctcagtcggcaagattattggaattcatatcggtgggaatggacgccaaggtttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaacaaagaaactgggagactgaacattaatggcccaacccgtaccaaattggagcctagtgcattctatgatgtgtttgagggcagcaagaaaccagcagtcttaaccagcaaggatcccagactcgaggttgactttgagcaagctttgttttccaagtatgtgggaaacactctgcacgaacctgacgagtacgtgacacaggctgctctccattatgcaaaccagctaaagcagttagatataaatgtcaataagatgagcatggaggaagcatgctacggcactgagtatctagaggccatagacttgcacaccagtgctgggtacccctatagcgccctgggtgtcaagaaaagagacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctactccacctatgtgaaagatgaacttagatccttagacaagatcaggaaagggaaatcccgtttgattgaagccagtagtctgaatgactcagtctatcttaggatgaccttcgggcatctctatgaaactttccatgccaacccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagcaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggttcagagctttggaggtggttctccgagagatcggctacccagaagaggctgtatcattgatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatctttaattccatgatcaataacataataatcagaaccctcttgatcaaaacttttaaggggattgatttagatgagttgcatatggtagcttatggggatgatgtgttagctagttacccattccctattgactgcttggagttagccaaaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccttgctttaatgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagatcaccaattcccatttcttattcaccctaccatgcccatgagggagatccacgagtccattcgttggactaaggacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcggttcccattggaagagccttggccataccaaattatgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC117318.1_Human_coxsackievirus_A16_strain_CA16/GD09/119_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctacgggatccttgtgcgcct-g-ttttata-----atcct---t---cccc-c-----aagta-gcaacttagaagc------------tttgtacaatcac-gaccag-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-cagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaatagagctattgtt-----tactta----tttatt-ggatacgtccctc-----ttaatct--------------caaagtcattcaa-actcttgattatatattgctccttaa--ctgtaaga-----aatggggtcgcaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggttcgaccataaattacacgactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgcttaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggctcagcttaccattgggaactctaccatcacgacgcaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccacgcgacctgacgtgtcagtgaacaggttttttacattagacactaaatcttgggccaagg------------------attcaaagggctggtattggaaattccctgacgttttgacagaagtgggtgtctttggccagaacgctcagttccactatctgtatcgatctgggttttgcgtgcacgttcagtgtaacgcaagtaaattccaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggactgggaacg------agaattctcatcctccctacgctactacacagcctggtcaggttggtgcagttctgacgcatccttacgtgctagatgcagggatccctttgagccaattaactgtgtgcccacatcaatggattaacttaagaactaataattgtgcaaccattatagttccatacatgaacacagttccttttgactcagctctcaaccactgcaactttggtctattggtcatcccggtggtgccattggatttcaatacgggcgccacatctgaaattcccattacggtcaccatagctcccatgtgcgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcagttccttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccacctatacacataccaggggaagtacacaacctgttggaaatatgcagagtggagaccatcctggaagtcaacaa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacaggtgaattatgtgctgcctttagggcagaccctggaagagatggtccgtggcagtccacaatattaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacatttatgtttgcaggctcattcatggccacaggtaaaatgctcatcgcctacaccccacctggggggaatgtgcctgcggacagaattacagcaatgctaggaacacatgtgatctgggacttcggactacagtcctctgtgacattggtcgtgccatggattagtaacacacactacagggcacacgcccgtgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactacgtagtacccattggtgctcctaccacagcgtacatcgtggctttggcagcagctcaggacaacttcactatgaaactatgcaaggatacggaggacattgagcaaacggccaatatacaaggggatcct--------attgcagatatgattg---atcagactgt--------------------------gaataatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggagcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggaaacagccattgggaatttctttagccgtgccggtcttgtcagtatcattactatgcccaccacgggtacaca-gaatacagatggctatgttaattgggatattgacttgatgggatacgctcagctgcggcggaaatgcgagttgtttacctacatgcgctttgatgctgagttcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggagagcacctccaagcaaatgacctagattatggccaatgcccaaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccatcaccctgagggtatacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacacctcgctacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggagtgtactattgcagttccaaaaggaaacactacccggttagtttcaccaagcccagtctggtatttgtggaagctagtgagtattacccagctagatatcaatctcatctcatgcttgccgtaggtcactcggaacctggtgactgtggtggtatcctcaggtgccaacatggtgtggtaggaattgtctccactggcggaagtggtcttgtggggtttgccgatgtcagagaccttctatggttggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggcttcactgatgcagtgtccagggaagtagaggcattgaagaaccatttaattggctcagaaggggctgttgagaaaatcttgaagaacttggtgaagctaatctcagctttagtcatagtcgttaggagtgattatgacatggtcaccctcacggctacgctagctctgatcgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcgtggctaaagaagtttaatgatatggccaacgctgcgaaagggcttgagtggatttctagtaaaatcagtaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgaatttttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatctagccca---------cttctgccgcaaatttcagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccagggacaggtaagtcacttgctacgggcatcatagctagagctattgctgacaaataccattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaatccagatggaaaggatatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaaccaatgctagcaatattgtagtccccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgacatagaggtgacagactcttataagacggatcttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccactagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagcattgacactgtagtgtcagagctaatcagagagtataataataggtctgccatcgggaacaccatagaagccctcttccaggggccccctaagtttaggcctataagaatt---aaccttgaagaaaagccggccccagatgccatcagtgatctacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccacagtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaaaaagcctgtgctgaggacagccacagtccaaggaccgagcttagattttgccttgtccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacacttcactatgttaggagtgcgagatcgcctagccattttgccacgccactcgcaaccaggaaaaactatttgggtggagcacaagctaatcactgtgttggatgctgttgaattggtggatgagcaaggcgtaaacttggagctcacactagtaaccttggacaccaacgaaaagtttagggatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggcgatgttgtacaatatggatttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtgggggcgtggtcacctcagtcggcaagatcattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaacaaagaaactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcccagacttgaggttgactttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacactaataagatgagcatggaggaagcatgctacggcactgagtatctagaggccatagacttgcacaccagcgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccaatcactagagacactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagacaagatcaagaaagggagatcccgtttgattgaagccagcagtttaaatgactcagtctaccttaggatgaccttcgggcatctctatgaaacttttcatgccaatccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccaatcctgctgccaggatcactctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtagtcctccgagagatcggctactcagaggaggctgtatcattaatagaagggatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaaccctcttgattaaaacttttaaggggattgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagttatccattccctattgattgctctgagctagccagaactggtaaagagtatgggttgacaatgacacccgctgacaagtcgccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccatttcttatccaccctaccatgcctatgagggagatccacgagtccattcgttggactaaggacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcccattggaagagccttggctataccaaattttgagaacttgagaagaaattggctcgagctatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JN674176.1_Human_coxsackievirus_A16_strain_HN1662/HN/CHN/2010_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctacgggacctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gcaacttagaagt------------tttgtacaatcac-gaccag-tagtaggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-cagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcaaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaatcca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaatagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaagccattcaa-actcttgattatatattgctccttaa--ctgtaaga-----aatggggtcgcaagtctccacccagcgatccgggtcacatgagaactcaaactctgcatcgg-agggttcgaccataaattacacgactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgcgtggctcagcttaccattgggaactctaccatcacgacgcaggaagcagctaacatagttatagcctacggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccacgcgacctgacgtgtcagtgaacaggttttttacattagacactaaatcttgggccaagg------------------attcaaagggctggtattggaaattccctgacgttttgacagaggtaggtgtctttggccagaacgctcagttccactatctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaattccaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaactctcatcctccctacgctactacacagcctggtcaggttggtgcagttctgacgcatccttacgtgctagatgcagggatccctctgagccaattaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatacatgaacacagttccttttgattcagctctcaaccactgcaactttggtctattggtcatcccggtggtgccgttggatttcaatacgggcgccacatctgaaattcccattacagtcaccatagctcccatgtgcgcggaatttgcgggtctgcgccaggcggtaaagcaaggcataccaacggagctcaaacctggtaccaatcagttccttactactgatgatggtgtttccgcaccaattctgccaggtttccatccgactccacctatacacataccaggggaagtgcacaacctgttggaaatatgcagagtggagaccatcctggaagtcaacaa----------tctaaagaccaatgagaccaccccc------atgcagcgcttgtgttttccagtgtcggtgcagagca------aaacgggtgaattatgtgctgcctttagggcagaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcaggttcactggaggtgacatttatgtttgcaggctcattcatggccacaggtaaaatgctcatcgcctacaccccacctggggggaatgtgcctgcggacagaattacagcaatgttaggaacacatgtgatctgggacttcgggttacagtcctctgtgacattggtcgtgccatggattagtaacacacactacagggcacacgcccgtgctgggtactttgactactacaccactggcatcattaccatatggtatcaaactaactacgtagtacccattggtgctcctaccacagcgtacatcgtggctttggcagcagctcaggacaacttcactatgaaactatgcaaagatacggaggatattgagcaaacggccaatatacaaggggatcct--------attgcagatatgattg---atcagactgt--------------------------gaataatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcagagacaggagcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggaaacagccattgggaatttctttagccgtgccggccttgtcagtatcatttctatgcccaccacgggtacaca-aaatacagatggctatgttaattgggacattgacttgatgggatacgctcagctgcggcggaaatgcgagttgtttacctacatgcgctttgatgctgagttcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaagatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggagagcacctccaagcaaatgacctagattatggccaatgcccaaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcagggcatggattccaagacctttgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacacctcgctacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgtaattgtcaaaccggagtgtactattgcagttccaaaaggaaacactacccagttagtttcaccaagcccagtctggtatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtaggtcactcggaacctggtgactgtggtggcatcctcaggtgccaacatggtgtggtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggttggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggcttcactgatgcagtgtccagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaaaatcctgaagaacttggtaaagctaatctcagctttagtcatagtcgttaggagtgattatgacatggtcaccctcacggctacgctagctctgatcgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctatccttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgctgcgaaagggcttgagtggatttctagtaaaatcagtaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgaatttttaaacaacctgaaacagcttccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatctagccca---------cttctgccgcaagtttcagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccagggacaggtaagtcacttgccacgggcatcatagctagagctattgctgacaaataccattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaatccagatggaaaggacatgtccttattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaaccaatgctagcaatattgtagtccccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgacatagaggtgacagactcttacaagacggatcttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccactagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtagtgtcagagctaatcagagagtataataacaggtctgccatcgggaacaccatagaagccctcttccaggggcctcctaagtttaggcctataagaatt---aaccttgaagaaaagccggccccagatgccatcagtgatctacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcaaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccacagtggttgcggttgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagttctcaaaaagcctgtgctgaggacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccacgccactcgcagccaggaaaaactatctgggtggagcacaagctaatcaatgtgttggatgctgttgaattggtggatgagcaaggcgtaaacttggagctcacactagtaaccttggacaccaacgaaaagtttagggatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggcgatgttgtacaatatggatttctaaatctcagcggtaagcctacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtgggggcgtggtcacctcagtcggcaagattattggaatccatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaaatccaacaaagaaactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgcattctatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcccagacttgaggttgactttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacactaataagatgagcatggaggaagcatgctacggcactgagtatctagaggccatagacttgcacaccagcgccgggtacccctatagtgccctgggcgtcaagaaaagagacatacttgacccaatcactagagacactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgaacttagatccttagacaagatcaagaaagggagatcccgtttgattgaagccagcagtctaaatgactcagtctaccttaggatgaccttcgggcatctctatgaaacttttcatgccaatccggggactgtgactgggtctgcagtagggtgtaatcctgatgtgttttggagtaaattaccgatcctgctgccaggatcactctttgcatttgactattcgggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtagtcctccgagagatcggctactcagaggaggctgtatcattaatagaagggatcaaccacacccatcatgtgtatcggaacagaacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaaccctcttgattaaaacttttaaggggattgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagttacccattccctattgactgctctgagctagccagaactggtaaagagtatggattgacaatgacacccgctgacaagtcgccttgctttaatgaagttacctgggagaatgccacattcttaaagagaggcttcctgccagatcaccaattcccatttcttatccaccctaccatgcctatgaaggagatccacgagtccattcgttggactaaggacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcccattggaaaagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttta------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617098.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_B_CF145057_FRA_2010
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctacgggatctttgtgcgcct-g-ttttata-----accct---c---cccc-t-----aagca-gcaacttagaagc------------tttgtacaatcat-gaccag-tagtgggcgtggcgcgccagccacgtcttgg-tcaagcacttctg-tgtccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggccgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cagcgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccacccgg--tgtctaacagagctattgtt-----tacttg----tttatt-ggatacgtccctc-----ttaattt--------------taaagccattcaa-actcttgattatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcggtccggatcacatgagaactcaaactctgcatcgg-agggctcaaccataaattacacaactataaactactacaaggatgcgtacgctgcgagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgacccagtcatggatgttatacatgagatggccccaccgctcaagtctccaagcgctgaggcatgtggttatagtgaccgtgtggcccagcttaccattgggaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacatagatgcaacggcagtcgacaaacccacacgacctgacgtgtcagtgaacagatttttcacgttagatactaaatcttgggccaagg------------------attcaaagggctggtattggaaattccctgatgtcttgacagaggtaggtgtttttggtcaaaacgctcagttccattacctgtatcgatctgggttctgcgtacacgttcagtgcaacgcaagtaagtttcaccaaggcgctttactggtggctgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattcccatcccccttacgccactacacagcctggtcaggttggcgcagttctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgtccacatcagtggattaacttaagaactaacaattgtgctaccattatagtcccatatatgaacacagtcccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtgccattggatttcaacgcaggcgccacatctgaaattcctattacagtcaccatagctcccatgtgcgcggaatttgcgggtctgcgtcaggcagtaaagcaaggcataccaacagagcttaaacctggtaccaaccagtttctcactactgatgatggtgtttccgcaccaattttgccaggttttcatccaactccacctatacacataccaggggaagtgcacaacctactggaaatatgtagagtggagaccattctggaagtcaacaa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccatggcagtccacaatactaggccaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggccacaggtaaaatgcttatcgcctacactccgcctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggattgcagtcttctgtgacgttggtcataccatggattagtaatacacactacagagcacacgcccgcgctgggtactttgactattataccactggcatcataaccatatggtatcaaaccaactatgtagtacccattggtgctcccactacagcgtatatcgtggctttggcagcagctcaggacaacttcactatgaaactatgcaaggatacggaagatattgagcaaacggctaatatacaaggggatcct--------attgcagatatgattg---accagactgt--------------------------gagcaatcaagtggatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggtactggtgttgtaccagcactacaagccgcggagacaggagcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccaccactccacgcaggagacagccattgggaacttctttagtcgtgccggtcttgtcagcattattacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgacttgatgggatatgctcagctgcggcggaaatgcgagttgtttacttacatgcgctttgatgctgaattcacatttgtcgtagctaagcccaatggtgagttagtccctcaattactgcagtacatgtatgttccaccaggggctccgaaacctacttccagagactcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtctcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggagagcacctccaagcaaatgacctagtttctggccaatgcccgaacaatatgatgggcacttttagtgttaggacagtagggactgagaagtcaccacattccattaccctgagggtatacatgagaattaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatatcaagtgcaccagcactagtagagataagat---aacaac---------------------------------------gttggga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacttattagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggggtatattattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagcttgatatttgtggaggctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgattgtggtggtatcctcaggtgccaacatggcgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgccgatgttagggaccttctgtggctagatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgatgcttttggtatgggcttcactgacgcagtgtccagggaagtggaggcattgaagaaccacttgattggctcagaaggagctgtagagaagattttgaagaacttggtgaagttaatctcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctaattgggtgtcatggaagcccttgggcatggatcaaagcgaaggcagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgctgcaaaagggcttgagtggatttctagtaaaatcagtaagttcattgattggctcaaggaaaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaaacagctcccc-ctgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctatgcagttgaagccaaaagagtttatgccctagagaaaaggatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccaggaacaggtaagtcacttgccacgggcatcatagctagagctattgctgataagtaccattctagcgtttactcactccctccagacccagaccattttgatgggtacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagacggaaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagaaaaaggagtgtctttcacctctaaattcgtcattgcatcaaccaatgctagcaatattgtagtccccacagtttcagattctgacgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaaaacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccactagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacacagtggtgtcagagctaatcagagaatataataataggtctgccatcgggaataccatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagaaaagccggctccagatgccatcagcgacctacttgctagtgtggatagtgaggaggttcgacaatactgc-agagaacaggggtggataatcccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcggtcgtgtctctcgtctatgtcatttataaattgtttgctggatttcaaggtgcttactctggtgcacctaagcaagctctcaaaaaacctgtgttaaggacggccacagtccaagggccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttgggagtgcgagatcgcctagccattttaccacgtcactcgcaaccaggaaaaactatttgggtggagcacaagttaatcaatgtgttggatgctgttgaattggtggatgagcaaggtgtaaacttggaactcacactagtaaccttggacactaacgaaaagtttagggatgtcaccaaatttattccagagacgatcaccggggcaagcgacgcaaccctggtcatcaacactgagtacatgccctcaatgtttgttccagtgggtgatgttgtacaatacggatttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggtgtggttacctcagttggtaagattattggaattcatatcggtgggaatggacgccaaggcttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaggtctaataaggaaactgggagactgaacattaacggcccaacccgtaccaaattggagcccagtgcattttatgatgtgtttgagggcagcaaagaaccagcagtcttaaccagcaaggaccccagacttgaggttgattttgagcaagccttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactatgcaaaccagctaaagcaattggatataaacactaataagatgagcatggaggaagcatgctacggcactgaatatctagaggccatagacttacacaccagtgccgggtacccctatagtgctctgggtgtcaagaaaagagacatacttgacccgaccactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagacaagattaagagagggaaatcccgcttgattgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgactgggtctgcagtagggtgtaatcccgatgtgttctggagcaaattaccgatcctgttaccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctctggaggtggttctccgagagatcggctactcagaggaggctgtatcattaatagaaggaatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccctcaggttgttccggtacctccatcttcaattccatgatcaataacataataatcagaaccctcttgattaaaactttcaaggggatcgatttagatgagttgaatatggtagcttatggagatgatgtgttggctagctatccattccctattgactgctcggagctagccagaactggtaaagagtatggattgataatgacacccgctgacaagtcaccttgctttaatgaagttacctgggaaaatgctacattcttaaagagaggcttcctgccagatcaccaattcccatttctcatccaccccaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctctgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcggttcccattggaaaagccttggctataccaaactttgagaacttgagaagaaattggctcgagctatttt--a--acatacagttt-------------------------aaag---------------ctgaaccc-caccagga----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF193630.1_Coxsackievirus_A16_isolate_BJ10-01_complete_genome
---------------------aaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---c---cccc-t-----aagca-gtaacttagaagc------------tttgtacagtcac-gactag-tagtgggcgtggcgcgccagccacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtaacaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtag-cccatgggacgctctaatacggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actcct-tactggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaagccattcaa-actcttgactatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccggatcacatgagaactcaaactccgcatcgg-agggttcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagagatttactgaccctgtcatggacgtyatacatgagatggccccaccgctaaagtctccaagcgccgaggcatgtggttacagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggctcgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgacgtatcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaagggttggtattggaagttccctgatgttttgacagaggtaggcgtttttggtcagaatgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgcaacgctagtaaatttcatcaaggcgctttactggtggctgtgctgcctgagtatgtactcggtactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagacgcagggatccctctgagccaactaactgtgtgcccacatcagtggattaacttaagaactaataattgtgcaaccattatagttccatatatgaacacagttccttttgactcagctcttaaccactgcaactttggtctactggtcatcccggtagtgccattagatttcaacacaggtgctacatctgaaattcccatcacagtcaccatagctcccatgtgtgcggaatttgcgggtcttcgccaggcggtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccgcctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccattctggaagtcaataa----------cttaaaaaccaatgagaccaccccc------atgcagcgcttgtgttttccagtgtcggtacagagca------aaacgggcgaattatgcgctgctttcagagcagaccctggaagagatggtccgtggcagtccacaatactaggtcaactctgcaggtactacacccagtggtcaggttcactggaggtgacattcatgtttgcaggctcattcatggctacaggtaaaatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgttaggaacacatgtgatctgggacttcggattgcagtcttctgtgacgttggtcgtgccatggatcagtaatacacactacagggcacacgcccgcgctgggtactttgactattacaccactggcattataaccatatggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgatag---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cccacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcgttgcaagccgcggagacaggggcatcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaggaaacagccattgggaatttcttcagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatctgatgggatatgctcagctgcgacggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcttaccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacctttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccttatttgttcaagaccaacccaaattataaaggaaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------gttagga------------------------------------------aagtttggacagcaatcaggcgccatatatgtgggcaactatagggtggtgaatcgacaccttgccacacacaacgattgggcaaaccttgtgtgggaggacagctctagggacttattagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaactggtgtatactattgcagttccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcattctcaggtgccagcatggtgtggtggggattgtctccactggaggaaatggtcttgtggggtttgccgatgttagagaccttctatggctggatgaagaagcaatggagcaaggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagagccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctctgattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggccaacgccgcgaaagggcttgagtggatttctagtaaaatcagtaagttcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ctattggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaagtcacttgctacgggcatcattgctagagctattgctgacaaataccactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtccctgttttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgatccgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagaaaacaacactgctaactttaagagatgcagcccgctagtgtgtggtaaggccattcaattaagagacaggaagtctaaagtgagatatagcattgacactgtggtgtcagagctaatcagagagtacaataataggtctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---aaccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagtgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcaccttaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaagaaacccgcgctaagaacagccacggttcaaggaccgagcttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgatcaaggacactttaccatgttaggggtacgagaccgcctggccattttgccacgccactcgcaaccaggaaaaactatttgggtggagcacaaattagttaatgtgttagatgctgttgagttagtggatgagcagggtgtgaacttggaactcacactaataactttagacactaacgaaaaatttagggacgtcaccaagtttatcccagagacaatcaccggggcaagcgacgcaaccttgatcatcaacactgagcatatgccctcgatgttcgtcccagtgggtgatgttgtacaatatggttttctgaatctcagcgggaagcccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtgggggggtagtcaccctcagtcggaagatcattggaattcacatcggtgggaacggacgccagggtttctgcgctgggctgaagagaagctactttgccagtgaacagggagagatccagtggatgaagcctaataaagagactggggagattgaactttatggcccaacccgtaccaaattggaacccagtgtatttcatgatgtgtttgaaggcaataaaaaaccaacagtcttgaacaataaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgaacctgatgagtacgtgacacaggccgctctccactatgcaaaccagttaaagcaattagacatcaacactaataagatgagcatggaagaagcatgctatggcactgagtacctggaggccatagatctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagggacatacttgatccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttggacctgccctattccacctatgtgaaagatgagcttagatctttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtttaccttaggatgacttttgggcacttttatgaggcttttcatgccaacccagggactgtgaccggatctgcagtggggtgcaatcttgatgtgttctggagcaagctaccgatcgtgctgccgggatcgctttttgcatttgattattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggtcctccgtgagatcggctactcagaggaggctgtgtcactgatagaagggatcaatcacacccaccatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacctccatcttcaattccatgattaacaacataataattagaactctcttgatcaaaacctttaaggggattgatttggatgagttgaacatggtagcttacggagatgatgtgttggctagctatccattccctattgactgctcggaattggccaaaactggtaaagagtatggactaacaatgacacctgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagatcaccaatttccattccttatccaccccaccatgcccatgagggagatccatgagtccattcgttggactaaggatgcacgtaacacacaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattggaagagccttggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagctt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgtcgat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617091.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_B_RP80_AUT_2003
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct-------tccc-t-----aaaca-gcaacttagaagt------------tttgcacactcac-gaccag-tagtgggcgtggcgcaccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---atttt--cattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tatctaacagagctattgtt-----taccta----ttcatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattgctccttaa--ttgcaaga-----aatggggtctcaagtctccactcaacgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaaccataaactactacaaggatgcatatgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgcggttatagtgatcgtgtggctcagcttaccattgggaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcgacggcagttgacaaacccacacggcctgacgtgtcagtgaacagatttttcacgttagacactaaatcttgggccaagg------------------attcaaaaggatggtattggaaattccctgatgttttgacagaagtaggtgttttcggtcaaaacgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgtaatgcaagtaaatttcaccaaggcgctttactggtagctgtgttgcccgagtatgtgctcggcactatcgcaggagggactgggaatg------agaattctcatcctccctacgctactacacagcctggtcaggttggtgcagttctgacacacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgtccacaccagtggattaacttaagaaccaataattgtgcaactatcatagttccatatatgaacacagttccttttgactcagctctcaatcattgcaattttggtctactggtcatcccgatagtaccattggatttcaatgcaggcgccacatctgaaattcctattacagtcaccatagctcccatgtgcgcggaatttgcgggtctgcgccaggcagtaaagcaaggtataccaacggagctcaaacccggcaccaatcagtttcttactactgatgatggtgtttctgcaccaattttaccaggtttccatccaactccacctatacacataccaggggaagtacacaacttgttagaaatatgcagagtggagaccatcctggaagttaacaa----------cctaaaaaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgaattatgtgctgcctttagagcggaccctggaagagatggtccatggcagtccacaatactgggccaactctgtaggtactacacccagtggtcaggttcattagaggtgacattcatgtttgcaggctcattcatggctacaggtaagatgcttatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacgcatgtgatctgggacttcggattacagtcttctgtgacgttggtcgtgccatggatcagtaatacacattatagggcacacgctcgtgctgggtactttgactattacactactggcatcataaccatatggtatcaaactaattatgtagtacccattggtgctcccactacagcgtacatcgtggctttggcagcagcccaggacaatttcactatgaagctatgcaaggatacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgatcg---accagactgt--------------------------gaacaaccaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaacactgaagcaagtagccacagattaggtactggcgttgtaccagcactacaagccgcagagacaggggcatcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttaaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggtcagcattattacaatgcccactacgggtacaca-gaacacagatggctacgttaattgggacattgacctgatgggatatgctcagctgcggcggaaatgtgaattgtttacctacatgcgctttgatgctgaatttacatttgtcgtggccaagcccaatggtgagctagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacccacttccagagattcgtttgcttggcagaccgccaccaacccatctgtatttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttaccccacctttggagagcatctccaggcgaatgacctggattatggccaatgcccgaacaatatgatgggcactttcagcattaggacagtagggactgaaaagtcaccacactccattaccctgagagtatacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgacattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcagtcaggtgccatatatgtgggcaattatagagtagtgaatcggcaccttgccacacacaacgactgggcaaatcttgtgtgggaggacagctctagagacctgttagtttcttccaccaccgcccaggggtgcgacaccattgctaggtgcaattgtcaaaccggagtgtactattgcagctccaaaagaaagcactacccggttagtttcaccaagcccagcctgatatttgtggaagctagtgaatattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggagcctggtgactgtggtggtattctcaggtgtcaacacggggcaataggaattgtctccactggtggaaatggtcttgtggggtttgctgatgtcagagatcttctatggctggatgaggaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgaagcggtgtccagggaagtagaggcattgaagaatcacttaattggctcagaaggagctgttgagaagattttgaagaacttggtgaagctaatctcagccttggtcatagtcgttaggagtgactatgacatggttaccctcacagccacacttgccttgattgggtgccatggaagcccttgggcatggatcaaagcgaagacagcctccattcttggcattcccatggtgcaaaaacagagcgcttcgtggttaaagaagtttaatgatatggctaacgctgcaaaagggcttgagtggatttctagcaaaatcagcaaattcattgattggcttaaggaaaagattattccggccgctaaagagaaagttgaatttttaaacaacctgaaacagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaagatttagaagctatgtttggtaatgtgtcgtatttagctca---------cttctgccgcaagtttcagccactctatgcgactgaagccaaaagagtttatgctctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctgatcattagaggctctccaggaacaggtaagtcacttgctacgggcatcatagctagagctattgcagacaaatatcattctagcgtttactcactccctccagacccagaccattttgatgggtacaagcaacaagtagtcactgttatggatgacctctgccaaaatccagatggaaaggacatgtctctattttgtcaaatggtttctacagtcgattttataccacccatggcatcactggaagagaaaggagtgtctttcacctctaagttcgtcatagcatcaaccaatgctagtaatattgtagtccctacagtttcagattcagatgcgattcgcaggcggttttatatggactgcgacatagaggtgacagactcttacaaaacggacctcggccgactcgacgcaggtagggccgctaagctttgcacagaaaacaacaccgctaacttcaagagatgcagcccattagtgtgtggtaaagccatccaactaagagacaggaagtctaaagtgagatatagtattgacactgtagtgtctgagctaatcagagagtataataataggtctgctattgggaataccatagaagccctctttcaaggaccccctaagttcaggcccataagaatt---agccttgaagaaaagccagccccagatgccatcagtgacttacttgctagtgtggatagcgaggaggttcgacaatactgc-agggagcaggggtggataattccagaaacaccggccaatgtggaacgtcacctcaacagagcggtgttggtgatgcagtccatcgccaccgtagtcgcagttgtgtctcttgtctatgtcatttataagttgtttgctgggtttcagggagcttattctggtgcgcctaagcaagctctaaagaaaccggtgctaagaacagccacagtccaaggaccgagcttagactttgccttatccctcctaagacgcaatatcagacaggtgcaaaccgatcaaggacatttcaccatgttaggagtgcgagatcgcctagccattttaccacgccactcgcaaccaggaaaaactatctgggtggagcacaagttaatcaatgtgctggatgctgttgaattggtggatgagcaaggtgtaaacttggaactcacactagtaaccttagacaccaacgaaaagtttagggatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatgggtttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgcggaggcgtggtcacttcagtcggcaagattatcgggattcacatcggtgggaatgggcgccaaggtttctgtgctggactgaaaagaggctacttcgccagtgaacaaggagagatccaatggatgaagtctaacaaagaaactgggagactgaacattaatggcccaacccgtaccaaattggagcccagcgcgttccatgatgtgtttgagggcaacaaagaaccagcagttttaaccagtaaagatcccagactcgaggttgactttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgacgaatacgtgacacaagctgctctccactatgcaaatcagctgaagcaattagacataaacaccaataagatgagtatggaggaagcatgctatggcactgaatacctagaagccatagacctgcacaccagtgccgggtacccctatagtgccttgggtgttaagaaaagagatatacttgacccaatcactagagatactaccaaaatgaaattctacatggacaaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccttagacaagattaagaaagggaaatcccgtttgattgaagccagtagcctgaatgactcagtctaccttaggatgacttttgggcacctctatgaaactttccatgctaatccagggactgtgaccgggtctgcagtagggtgcaaccctgatgtgttctggagcaaactaccgatcctgctgccaggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttttccgagagatcggctactcggaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgatcaataacataataatcagaactctcttaattaaaacttttaaggggatcgatttagatgagttgaacatggtggcttatggggatgatgtgttagctagctacccgttccccattgactgctcggagttggccgaaactggtaaagagtatggactcacaatgacacccgctgacaagtcaccctgttttaacgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccatttcttatccaccctaccatgcccatgaaggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgttctttgtgcctcttagcatggcataatgggaaggaggaatatgaaaaattcgtgagtacaattagatcagttcccattggaaaagccttggctataccaaatttcgagaacttgagaagaaattggctcgaattatttt--a--acatacagttc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617093.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_B_BUD22_HUN_2008
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgccagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---ccct-t-----aagca-gtaacttagaagc------------ttcgcactatcac-gaccag-tagtaggcgtggcgtaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacgcggtgtg-aagagtctattgagctggttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcactctcaatcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----tcaatct--------------caaggccattcaa-actcttaattatatactacttctcaa--ctgtaaga-----aatggggtcacaagtctctactcagcgatccgggtcgcatgagaactcaaactctgcatcgg-aaggttcaactataaattacacaactataaactactacaaggatgcatatgctgcaagcgcagggcgtcaagatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggctatagtgatcgtgtggcccagcttaccattgggaactctaccatcacgacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtgtcagtgaacagatttttcacgctagacactaaatcttgggctaagg------------------attcaaagggatggtactggaaattccctgatgttttgacagaggtaggtgtgtttggtcaaaatgctcagttccactacctgtatcgatctggattttgcgtgcatgtccaatgcaatgcaagtaaattccaccagggtgctttactggtagccgtgctgcctgagtacgtgctcggtactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggccaggttggagcagtcctgacgcacccttacgtactagatgcagggatccctttgagccaattaactgtgtgccctcaccagtggatcaacctgagaaccaataattgtgcaaccattatagttccatatatgaacacagttccatttgattcagctcttaaccactgcaattttggtttgctggtcatcccggtggtaccattggacttcaacacaggtgccacgtctgaaattcctattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactaccgatgatggtgtctctgcaccaattttaccaggtttccacccaactccacctatacacataccaggagaagtacgcaacttattggagatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcagtgcagagta------aaacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggtcaactctgcaggtactacacccagtggtcgggttcattggaagtaacattcatgtttgcgggctcattcatggccacaggcaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctagggacacatgtgatctgggacttcggattacaatcttctgtgacattggttgtgccatggattagcaacacacactacagggcgcatgcccgtgctggatactttgactattacaccaccggcattataacaatatggtatcaaactaactatgtggtacctattggtgctcccactacagcatacatcgtagctttggcagcagcccaggacaactttaccatgaagctatgcaaggacacggaggacattgagcaaacagctaatatacaaggggatccc--------attgcagacatgatcg---accaaaccgt--------------------------gaataaccaagtgaaccgctccttaactgcactgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacaggttaggtactggtgttgtaccagcgctacaagctgcggagacaggggcgtcgtcaaatgctagtgataagaatctcattgagacgagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggttagcatcatcacaatgcccactacgggtacaca-gaacacagacggttacgttaattgggacattgatttgatgggatatgctcaactacggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacatttgttgtagccaaacccaatggcgagctagtcccccaattactacaatacatgtatgtcccaccaggggctccgaaacccacatccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacagacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttatcccaccttcggggagcatctccaagcaagtgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggactgtagggactgagaagtcaccacactccattaccctgagggtatatatgaggattaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------gttggga------------------------------------------aagtatgggcagcagtcaggtgccatatatgtaggtaactataggatagtcaatcggcatcttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgttggtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggagtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgaatattacccagctagataccaatcccacctcatgcttgctgtaggccactcagaacctggtgactgtggtggcatccttaggtgccagcacggtgtgataggaattgtctccactggtggaaatggtcttgtggggtttgctgacgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtggaggcattgaggaaccatttaattggctcagaaggggctgttgaaaagatcctgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaggacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggttaaagaagtttaatgacatggctaatgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccactaaagagaaagttgaattcttgaacaacctgaagcagcttccc-ttactggagaaccaaatttcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagtttcagccactctatgcgaccgaagctaaaagagtctatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacccgtgtgtttgatcattagaggctccccagggacaggcaagtcacttgctacgggcatcatagctagagccattgctgacaaatatcattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtaggtactgttatggatgatctttgtcaaaacccagatggaaaggacatgtcactattttgtcaaatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagactcagatgcgattcgcagacgattctacatggactgcgatatagaggtaacagactcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctttgcacggagaacaacaccgccaactttaagagatgcagcccactagtgtgtggcaaagctattcaactaagagacaggaaatctaaagtgagatacagcattgataccgtagtgtcagagctaatcagagagtataataataggtctgccattggtaatactatagaagctctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagagaagccagccccagatgccatcagtgacctacttgctagtgtggatagcgaggaggttcggcaatactgc-agggaacaggggtggataattccagaaacaccggctaatgtggaacgtcacctcaacagagcagtgctagtgatgcagtccatcaccaccgtgattgcagtcgtgtctcttgtctatgttatttacaaattgttcgctgggtttcagggcgcttattctggcgcgcctaagcaagctctcaagaaacccgcgctaagaacagccacggttcaaggacctagcttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgatcaaggacacttcaccatgttaggggtacgagaccgcctagccattttgccacgccactcgcaaccaggaaaaactatctgggtggagcacaaattaattaatgtgctagatgctgttgagttagtagatgagcaaggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggacgtcaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttgatcatcaacaccgagcacatgccctcaatgttcgtcccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggggtagtcacctcagtcggtaagatcattggaatccacatcggtgggaacggacgccagggtttctgtgctggactgaagagaggctactttgccagcgaacagggagagatccagtggatgaagcccaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtattccatgatgtgttcgagggcagtaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgaacctgatgagtacgtgacacaggctgctctccactatgcaaatcagttaaagcaattggacatcaacactaataagatgagcatggaagaggcatgctatggcactgagtacctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagggatatactcgatccaatcactagagacaccaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgattttcgggcatctctatgagacttttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccgggatcgctctttgcatttgattattcagggtatgacgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgagagatcggctactcagaggaggctgtgtcactaatagaagggatcaaccacacccatcatgtgtaccggaacaagacatattgtgtccttggtgggatgccctcaggctgttccggcacttccatcttcaattccatgattaataacataataatcagaactctcttgatcaaaacctttaaggggattgatttggatgagttgaacatggtagcttacggagatgacgtgttggctagctatccattccctattgactgctcggagttggccaagactggcaaagagtatggactaacaatgacgcctgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggattcctgccagaccaccaatttccattccttatccaccccaccatgcccatgagggagatccatgagtccatccgttggactaaggatgcacgtaatactcaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagtcttggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU854873.1_Coxsackievirus_A16_strain_CA16-193_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---cccc-t-----aaaca-gtaacttagaagc------------ttcacactatcac-gaccaa-tagtaggcgtggcgcaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcactgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggtaaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgtaccctcaatcca-ggggg-cagcgcgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----tcaatct--------------caaggccattcaa-actcttgattatatactacttctcaa--ctgtaaga-----aatggggtcacaagtctctactcagcgatctgggtcgcatgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactattacaaggatgcatatgctgcaagcgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggctatagtgatcgtgtggcccagcttaccattgggaattctaccatcacgacgcaagaagcagctaacatagttatagcctatggcgagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtgtcagtgaacagatttttcacgctagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaggtaggtgtgtttggtcaaaatgctcagttccactacctgtatcgatctggattttgcgtgcatgtccagtgcaatgcaagtaaattccaccagggtgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggccaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgccctcaccagtggatcaacctgagaactaataattgtgcaaccattatagttccatatatgaacacagttccatttgattcagctctcaaccactgcaattttggtttgctggtcatccctgtggtgccattggacttcaacacaggtgccacgtctgaaattcctattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactaccgatgatggtgtctccgcaccaattttaccaggtttccatccaaccccacctatacacataccaggagaagtacacaacttattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcaacgcttgtgctttccagtgtcggtgcagagta------aaacaggcgagttatgtgctgcctttagagctgaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcgggttcattggaagtaacattcatgtttgcgggctcattcatggccacaggcaagatgctcatcgcctataccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctagggacgcatgtgatctgggacttcggattacaatcttctgtgacgttggttgtgccatggattagcaacacacactacagggcgcacgcccgtgctgggtactttgactattacaccaccggcattataactatatggtatcaaactaactatgtggtgcctattggtgctcccactacagcatacattgtagctttggcagcagcccaggacaactttaccatgaaactatgcaaggacacggaggacattgagcaaacagctaatatacaaggagatccc--------attgcagacatgatcg---accaaaccgt--------------------------gaataaccaagtgaaccgctccttaactgcactgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagctgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagacgagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggttagcatcatcacaatgcccaccacgggtacaca-gaacacagacggttatgttaactgggacattgatttgatgggatatgctcaattacggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacatttgtcgtagccaagcccaatggtgagctagtcccccaactactgcagtacatgtatgtcccaccaggggctccgaaacccacatccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttatcccaccttcggggagcatctccaagcaaatgatctagattatggccaatgcccgaataatatgatgggcacttttagtattagaactgtagggactgagaagtcaccacactccattaccctgagggtatatatgaggattaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------gagtttgggcagcagtcaggtgccatatatgtaggcaactatagggtagtgaatcggcatcttgccacacacaacgactgggcaaatcttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggaatatattattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattacccagctagataccaatcccacctcatgcttgctgtaggccattcagaacctggtgactgtggtggcatcctcaggtgccaacacggtgtggtaggaattgtctccactggtggtaatggtcttgtggggttcgctgacgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtggaggcattgaagaaccatttaattggctcagaaggggctgttgaaaagatcctgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgattatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctaaggagaaagttgaattcttgaacaacctgaagcagcttccc-ttactggagaaccaaatttcaaatcttgaacagtctgctgcctcacaagaggatttagaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagtttcagccactctacgcgaccgaagctaaaagagtctatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctccccaggaacaggcaagtcacttgcaacgggcatcatagctagggccattgctgacaaatatcattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagttactgttatggatgatctttgtcaaaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcaaccaatgctagcaacatagtagttcctacagtttcagactcagatgcgattcgcagacgattctacatggactgcgatatagaggtaacagactcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctttgcacggagaacaacaccgccaattttaagagatgcagcccactagtgtgtggcaaagctattcaattaagagacaggaaatctaaagtgagatatagcattgatactgtggtgtcagaactaatcagagagtataataataggtctgccattggtaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagagaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcggcaatactgc-agggaacaggggtggataattccagaaacaccgactaatgtggagcgtcacctcaacagagcagtgctagtgatgcagtccatcgccaccgtggttgcagtagtgtctcttgtctatgttatttacaaattgttcgctgggtttcagggtgcttattctggcgcgcctaagcaagcactcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgaccaaggacacttcaccatgttaggtgtacgagaccgcctggccattctgccacgccactcgcaaccaggaaaaactatttgggtggagcacaaattaattaatgtgttagatgctgttgaattagtagatgagcagggtgtgaacttggaactcacactaataactttagacaccaatgaaaagtttagggacgtcaccaagtttattccagagacaattaccggagcaagcgatgcgaccttgatcatcaacactgagcatatgccctcaatgttcgtcccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaacttccctacaaaggcaggacagtgtggaggggtagtcacctcagtcggtaagatcattggaatccacatcggtgggaacggacgccaaggtttttgtgctggactgaagagaagctactttgccagtgaacagggagagatccagtggatgaagcctaataaagagactgggagactgaacattaatggtccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcagtaaagaaccggcagtcttgactagcaaggatcccagactcgaggttaattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgaacctgatgagtacgtgacacaggctgctctccactatgcaaaccagttaaagcaattggacatcaacactaataagatgagcatggaagaagcatgctatggcactgaatacctggaggccatagacctacacaccagtgctgggtatccctatagtgccttgggtgttaagaaaagggacatactcgatccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttggacttgccttattccacctatgtgaaagatgagcttagatccttagacaagattaagaaagggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacttttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccgggatcgctttttgcatttgactattcagggtatgatgcaagtctcagcccagtgtggtttagagctctagaggtggttctccgtgagatcggctactcagaggaggctgtgtcactaatagaagggatcaaccacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgattaataacataataatcagaactctcttgatcaaaacctttaaggggatcgatttggatgagttgaacatggtagcttacggagatgatgtgttggctagctatccattccctgttgactgctcggagttggccaggactggtaaagaatatggactaacaatgacacctgctgacaaatcaccttgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagactaccaatttccattccttatccaccccaccatgcccatgagggagatccatgagtccattcgttggactaaggatgcacgtaatactcaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----cgttaat-g-actg--------gcgggggtaaatttgt-ta-taacc-a-g-aatagcaa------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP266573.1_Coxsackievirus_A16_strain_2008-43-7_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---cccc-t-----aagca-gtaacttagaagc------------ctcacactatcac-gaccaa-tagtaggcgtggcgcaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgtcatccggctaactacttcgagaaacc-tagtaacaccgtgaaagttgccgagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------ggggcaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgtaccctcaatcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----tcaatct--------------caaggccattcaa-actcttgattatatactacttctcaa--ctgtaaga-----gatggggtcacaagtctctactcagcgatccgggtcgcatgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactactacaaggatgcatatgctgcaagcgcagggcgccaggatatgtcccaagacccgaagaagtttaccgaccctgtcatggatgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggctatagtgatcgtgtggcccagcttaccattgggaattctaccatcacgacgcaggaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtgtcagtgaacagatttttcacgctagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaggtaggtgtgtttggtcaaaatgctcagttccactacctgtatcgatctggattttgcgtgcatgtccagtgtaatgcaagtaaattccaccagggtgctttactggtggccgtgctgcctgagtatgtactcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggccaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtatgccctcaccagtggatcaacctgagaaccaacaattgtgcaaccattatagttccatatatgaacacagttccatttgattcagctcttaaccactgcaattttggtttgctggtcatcccggtggtgccattggacttcaacacaggtgccacgtctgaaattcctattacagtcaccatagctcctatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggcaccaatcagtttcttactaccgatgatggtgtctccgcaccaattttaccaggtttccacccaactccacctatacacataccaggagaagtacacaacttactggaaatatgcagagtggagaccatcttggaggtcaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcagtgcagagta------agacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcagatactacacccagtggtcgggttcattggaagtaacattcatgtttgcgggctcattcatggccactggcaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggatagaatcacagcaatgctagggacgcatgtgatttgggacttcggattacaatcttctgtgacgttggttgtgccatggattagcaacacacactacagggcgcacgcccgtgctgggtactttgattattacaccaccggcattataactatatggtatcaaactaactatgtggtacctattggcgctcccactacagcatacattgtagctttggcagcagcccaggacaactttaccatgaaactatgcaaggacacggaggacattgagcaaactgctaatatacaaggggatccc--------attgcagacatgatcg---accaaaccgt--------------------------gaataaccaggtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaatactgaggcaagtagtcacagattaggcactggtgttgtaccagcactacaagctgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagacgagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggttagcatcatcacaatgcccaccacgggtacaca-gaacacagacggttacgttaactgggacattgatttgatgggatatgctcaattacggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgtgctagtcccccaattgttgcagtacatgtatgtcccaccaggggctccgaaacccacatccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttatcccaccttcggggagcatctccaagcaaatgacctagattatggccaatgcccaaataatatgatgggcacttttagcattagaactgtagggactaagaagtcaccacactccatcaccctgagggtatatatgaggatcaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------gagtttgggcagcagtcaggtgccatatatgtaggcaactatagggtagtgaatcggcatcttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtctcttccaccactgcccaggggtgtgacactatcgctagatgcaattgtcaaaccggaatatattattgcagctccaagaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattacccagctagataccaatcccacctcatgcttgctgtaggccattcagaacctggtgactgtggtggcatcctcaggtgccaacacggtgtggtagggatcgtctccactggtgggaatggtcttgtggggttcgctgacgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtggaggcattgaagaaccatttaattggctcagaaggggctgttgaaaagatcctgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgattatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcgtggctaaagaagtttaatgacatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctaaagagaaagttgaattcttgaacaacctgaagcagcttccc-ttactggagaaccaaatttcaaatcttgaacagtctgctgcttcgcaagaggatttagaagctatgtttggtaatgtgtcatatttggccca---------tttttgccgcaagtttcagccactctacgcgaccgaagctaaaagagtctatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgcttgatcatcagaggctccccagggacaggcaagtcacttgctacgggcatcatagctagggccattgctgataaatatcattctagcgtttactcactccctccagacccagatcattttgatggatacaagcaacaagtagttactgttatggatgatctttgtcaaaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagactcagatgcgattcgcagacgattctacatggactgcgatatagaggtaacagactcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctttgcacggagaacaacaccgccaattttaagagatgcagcccactagtgtgtggcaaagcgattcaattaagagacaggaaatctaaagtgagatatagcattgatactgtggtgtcagaactaatcagggagtataataataggtctgccattggtaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagagaagccagctccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcggcaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggagcgtcacctcaacagagcagtgttagtgatgcagtccattgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgctgggttccaaggtgcttattctggcgcgcctaagcaagctctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgatcaaggacacttcaccatgttaggggtacgagaccgcctggccattctgccacgccactcgcaaccaggaaaaaccatttgggtggagcacaaattaattaatgtgttagatgctgttgaattagtagatgagcagggtgtgaacttggaactcacactaataactttagacaccaacgagaagtttagggacgtcaccaagttcattccagagacaatcaccggggcaagcgacgcaaccttgatcatcaacactgagcatatgccctcaatgttcgtcccagtgggtgatgttgtacaatatggatttttgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggggtagtcacctcagtcggtaagatcattggaatccacatcggtggaaacggacgccagggtttctgtgctggactgaagagaagctactttgctagtgaacagggagagatccagtggatgaagcctaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtatttcatgatgtgtttgagggcagtaaagaaccagcagtcttaaccagcaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgaacctgatgagtacgtgacacaggctgctctccactatgcaaaccagttgaagcaattagacatcaacaccaataagatgagcatggaagaagcatgctatggcacagaatacctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagggacatactcgatccaatcactagagataccaccaaaatgaaattctacatggacaaatatgggttggacttgccctattccacctatgtgaaagatgagcttagatctttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacttttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccgggatcgctttttgcatttgattactcagggtatgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtcactaatagaagggatcaaccacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgattaataacataataatcagaactctcttgatcaaaacctttaaggggatcgatttggatgagttgaacatggtagcttacggagatgatgtgttggctagctatccattccctgttgactgctcggagttggccaagactggtaaagagtatggactaacaatgacacctgctgacaaatcaccctgctttaacgaggtcacctgggaaaatgccacatttttaaagagaggcttcctgccagatcaccaatttccattccttatccaccccaccatgcccatgagggagatccatgagtccattcgttggactaaggatgcacgtaatactcaggatcacgtgcgctccttgtgccttttggcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaattttgagaacttgagaagaagttggctcgaattatttt--a--atatacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aa-------------------------------------
>KF991007.1_Coxsackievirus_A16_isolate_DL16_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---cccc-t-----aagca-gtaacttagaagc------------ttcacactatcac-gaccaa-cagtgggcgtggcgcaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tattagcaccgtgaaagttgcggagagtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgtaccctcaatcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--taaccaacagagctattgct-----tacctg----tttatt-ggatacgtccccc-----tcaatcc--------------caaggccattcaa-actcttgattacatattacttctcaa--ctgtaaga-----aatggggtcacaagtctctactcaacgatccgggtcgcatgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactactacaaggatgcgtatgctgcaagcgctgggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggctatagtgatcgtgtggcccagcttaccattgggaattctaccatcacgacgcaagaagcagctaacatagttattgcctatggggagtggcctgaatattgcccagacacagatgcaacggcggtcgacaagcccacacgacctgacgtgtcagtgaacagatttttcacgctagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacggaggtaggtgtgtttggtcaaaatgctcagttccactacctgtatcgatctggattttgcgtgcatgtccagtgcaatgcaagcaaattccaccagggtgctttactggtggccgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctatgccactacacagcctggccaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgccctcaccagtggatcaacctgagaactaacaattgtgcaaccactatagttccatatatgaacactgttccatttgattcagctctcaaccactgcaattttggtttgctggtcatcccggtggtaccattggacttcaacacaggtgccacgtccgaaattcctattacagtcactatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcaatttcttactactgatgatggtgtctccgcaccaattttaccaggtttccacccgactccacctatacacataccaggagaagtacacaacttattggaaatatgcagagtggagaccatcttggaggttaacaa----------tctgaaggccaatgagaccaccccc------atgcagcgcttgtgttttccagtgtcggtgcagagta------aaacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcgggttcattggaagtaacattcatgtttgcgggctcattcatggccacaggcaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctagggacgcatgtgatctgggacttcggattacaatcttctgtgacgttggttgtgccatggattagcaacacacactacagggcgcacgcccgtgctgggtactttgactattacaccaccggcattataactatatggtatcaaactaactatgtggtacctattggtgctcccactacagcatacattgtagctttggcagcagcccaggacaactttaccatgaaactatgcaaggacacggaagacattgagcaaacagccaatatacaaggggatccc--------attgcagacatgatcg---accaaaccgt--------------------------gaataaccaagtgaaccgctccttaactgcactgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagctgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagacaagatgtgtgttgaaccatcactccacacaggagacagctattgggaatttctttagccgtgctggtttggttagcatcattacaatgcccaccacgggtacaca-gaacacagacggttacgttaactgggacattgatttgatgggatatgctcaattacggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagttccccaattactgcagtacatgtatgtcccaccaggggctccgaaacccacatccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttatcccaccttcggggagcatctccaagcaaatgacctagattatggccaatgcccaaataatatgatgggcacttttagcattagaactgtagggactgagaagtcaccacactccattaccctgagggtatatatgaggatcaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaatccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attgggg------------------------------------------gagtttgggcagcagtcgggtgccatatatgtaggcaactatagggtagtgaatcggcatcttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaactggaatatattattgcagctccaaaagaaaacactacccggttagtttcaccaagcccagcctggtatttgtggaggctagtgagtattacccagctaggtaccaatcccacctcatgcttgctgtaggccattcagaacctggtgactgtggtggcatcctcaggtgccaacacggtgtggtaggaattgtctccactggcggaaatggtcttgtggggttcgctgacgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtggaggcattgaagaaccatttaattggctcagaaggggctgttgaaaagatcctgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgattatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggtattcctatagcgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttagggaaaagattattccagccgctaaggagaaagttgaattcttgaacaacctgaagcagcttccc-ttactggagaaccaaatttcaaatcttgaacagtctgctgcctcacaagaggatttagaagctatgtttggtaacgtgtcatatttggccca---------tttctgccgcaagtttcagccactctacgcgaccgaagctaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctccccaggaacaggcaagtcacttgctacgggcatcatagctagggccattgctgataaataccattctagtgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagttactgttatggatgatctttgtcaaaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagactcagatgcgattcgcagacgattctacatggactgcgatatagaggtaacagactcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctttgcacggagaacaacactgccaattttaagagatgcagcccactagtgtgtggcaaagctattcaattaagagacaggaaatctaaagtgagatatagcattgacactgtggtgtcagaactaatcagggagtataataataggtctgccattagtaatactatagaagccctcttccaaggactccctaagttcaagcctataagaatt---agccttgaagagaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcggcaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggagcgtcaccttaacagagcagtgctagtgatgcagtccatcaccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgctgggttccagggcgcttattctggcgcgcctaagcaagctctcaaaaagcccgtgctacgaacagccacggttcaaggaccgagcttggactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgatcaaggacacttcaccatgttaggggtacgagaccgcctggctattctgccacgccactcgcaaccaggaaaaactatttgggtggagcacaaattaattaatgtgttagatgctgttgaattagtagatgagcagggtgtgaacttggaactcacactaataactttagacaccaacgaaaagtttagggatgtcaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttgatcatcaacactgagcatatgccctcaatgttcgtcccagtgggtgatgttgtacagtatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggggtggtcacctcagtcggcaagatcattggaatccacattggtgggaacggacgccaaggtttctgtgctggactgaagagaagctactttgccagtgaacagggagagatccagtggatgaaacctaataaagagactgggagactgaacattaacggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcaataaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtggggaacaccttgcacgaacctgatgagtacgtgacacaggccgctctccactatgcaaaccagttaaagcaattagacatcaacactaataagatgagcatggaagaagcatgctatggcactgaatacctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagggacatactcgatccagtcactagagataccaccaaaatgaaattctacatggataaatatgggttggacttgccctattccacctacgtgaaagatgagcttagatctttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacttttcatgccaaccccgggactgtgaccggatctgcagtagggtgcaatcctaacgtgttctggagcaaactaccgatcctgctgccgggatcgctttttgcatttgattattcagggtatgatgcaagtctcagcccagtatggtttagagctttagaggtggttcttcgtgagatcggctactcagaggaggctgtgtcattaatagaagggatcaaccacacccatcatgtgtatcggaataagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgatcaataacataataatcagaactctcttgatcaaaacctttaaggggatcgattaggatgagttgaacatggtagcttacggagatgatgtgttggctagctatccattccctgttgactgctcggaattggccaaaactggtaaagagtatggactaacaatgacacctgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagatcaccaattcccattccttatccaccccaccatgcccatgagggagatccatgagtccattcgctggactaaggatgcacgtaatactcaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaagaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccctggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-act-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC755235.1_Coxsackievirus_A16_isolate_ZJ10-48_polyprotein_gene_complete_cds
--tacaaaaaagcaggctttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---cccc-t-----aagca-gtaacttagaagc------------ttcacactattac-gaccaa-tagtaggcgtggcgcgccagtcacgttttgg-tcaagcacttctg-tctccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtga-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaatcca-gggggccagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----tcaatct--------------caaagccattcaa-actcttgattacatattacttcttaa--ctgtaaga-----aatggggtcacaagtctctactcaacgatccgggtcgcatgagaattcaaactctgcatcgg-aaggttcaaccataaattacacaactataaactactacaaggatgcatatgctgcaagcgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgtcatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggctatagtgatcgtgtggcccagcttaccattgggaattctaccatcacgacgcaagaagcagctaacatagttatagcttacggggagtggcctgaatattgcccagacgctgatgcaacggcagtcgataagcccacacgacctgacgtgtcagtgaacagatttttcacactagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccccgatgttttgacagaggtaggtgtgtttggtcaaaatgctcagttccactacctgtatcgatctgggttttgcgtgcatgtccagtgcaatgcaagtaaattccaccagggtgctttactggtggccgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggccaggttggtgcagtcctgacgcacccttacgtgctagatgcaggtatccctttaagccaattaactgtgtgccctcaccagtggatcaacctgagaactaataattgtgcaaccattatagtcccatatatgaacacagttccgtttgattcagctcttaaccactgcaattttggtttgctggtcatcccggtggtaccactggacttcaacgcaggtgccacgtccgaaattcctattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcaataaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactaccgatgatggtgtctccgcaccaattttaccaggtttccacccaactccacctatacacataccaggagaagtacacaacttattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctaaagaccaatgagaccaccccc------atgcagcgtttgtgttttccagtgtcggtgcagagta------aaacgggcgaattatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcgggttcattggaagtaacattcatgtttgcgggctcattcatggccacaggcaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggatagaatcacagcaatgctagggacgcatgtgatctgggacttcggattacaatcttctgtgacgttggttgtgccatggattagcaacacacactacagggcgcacgcccgtgccgggtactttgactattacaccaccggcattataactatatggtatcaaactaactatgtggtacctattggtgctcccactacagcatacattgtagcattggcagcagcccaagacaactttaccatgaaactatgcaaggacacggaggacattgagcaaacagctaatatacaaggggatccc--------attgcagacatgatcg---accaaaccgt--------------------------gaataaccaagtgaaccgctccttaactgcactgcaagtacta--------cctacagctgccaatactgaagcgagtagtcacagattaggcactggtgttgtaccagcactacaagctgcagagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagacgagatgtgtgttgaaccatcactccacacaggagacagctattgggaatttctttagccgcgctggtttggttagcattattacaatgcccactacgggtacaca-gaacacagacggttacgttaactgggacattgatttgatgggatatgctcaattacggcgcaaatgcgagttgtttacatatatgcgctttgacgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccaccgggagctccgaaacccacatccagggattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccctttcatgtcaccagccagtgcataccaatggttttacgatggttatcctaccttcggggagcatctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcaccttcagcattagaactgtagggactgagaagtcaccacactccattaccctgagggtatatatgaggatcaaacatgtcagagcatggatcccaaggcctttgagaaatcaaccgtatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcagtcaggtgccatatatgtaggcaactatagggtagtgaatcggcatctcgccacgcacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgctagtctcttccaccaccgcccagggatgcgacactatcgctagatgcaattgtcaaaccggaatatattactgcagctccaaaagaaaacactacccggttagttttaccaagcccagcctgatatttgtggaggctagtgagtattacccagctagatatcaatctcacctcatgcttgctgtaggccattcagaacctggtgattgtggtggcatcctcaggtgccaacacggtgtggtaggaattgtctccactggtggaaatggtcttgtggggttcgctgacgtcagagatcttctatggctggatgaagaggcaatggaacagggagtaactgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtggaggcgttaaagaaccatttaattggctcagaaggggctgttgaaaggatcctgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgattatgacatggttaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggcaaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctagggagaaagttgaatttttgaacaacctgaaacagcttccc-ttactggagaaccaaatttcaaatcttgaacagtcagctgcctcacaagaggatttagaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaaatttcaaccactctacgcgaccgaagctaaaagagtttatgccctagagaaaagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctccccaggaacaggtaagtcacttgctacgggcatcatagctagggccattgctgacaaatatcattctagcgtttactcactccctccagacccagatcattttgatggatacaagcaacaagtagtcactgttatggatgatctttgccaaaacccagatggaaaggatatgtcactattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtccttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagtccctacagtttcagactcagatgcgattcgcagacgattctacatggactgcgatatagaggtaacagactcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctttgcacggagaacaacactgccaattttaagagatgcagcccactagtgtgtggcaaagctattcaattaagagacaggaaatctaaagtgagatatagcattgacactgtggtgtcagagctaatcagggagtataataataggtctgccattggtaatactatagaagccctcttccaaggtccccctaagttcaagcctataaggatt---agccttgaagagaagccagccccagatgccatcagcgacctactcgctagtgtggatagcgaggaggttcggcaatactgc-agggaacaggggtggataattccagaaacaccaaccaatgtggagcgtcaccttaacagagcagtgctactgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgctgggttccagggcgcttattctggcgcgcctaagcaagctctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatctcttttaaggcgtaacattagacaggtgcaaactgatcaaggacacttcaccatgttaggggtacgagaccgcttggccattctgccacgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgagttagtagatgagcagggtgtgaacttggaactcacactaataactttagacaccaatgaaaagttcagggacgtcaccaagtttattccagagacaatcaccggagcaagcgacgcaaccttgatcatcaacactgagcatatgccctcaatgttcgtcccagtgggtgatgttatgcaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaacttccctacaaaggcgggacagtgtggaggggtagtcacctcagtcggtaagatcattggaatccacatcggtgggaacggacgccagggtttctgtgctggactgaagagaagttacttcgccagtgaacagggagagatccagtggatgaagcctaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcaataaagaaccagcagtcttaaccagtaaggaccccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacactctgcacgaacctgatgagtacgtgacacaggccgctctccactatgcaaaccagttaaagcaattagacatcaacactaataagatgagcatggaagaagcatgctatggcactgagtacctggaggccatagatctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagggacatacttgatccaatcactagggatactaccaaaatgaaattctacatggataaatatgggttggacttgccctattccacctatgtgaaagatgagcttagatctttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagactttccatgccaacccggggactgtgaccgggtctgcagtagggtgcaatcctgatgtgttctggagcaaactaccaatcctgctgccgggatcgcttttcgcatttgattattcagggtatgatgcaagtctcagcccagtatggttcagagctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtcactaatagaagggatcaaccacacccaccatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgatcaataacataataatcagaactctcttgatcaaaacctttaaggggatcgatttggatgaactgaacatggtagcttacggagatgatgtgttggctagctatccattccctgttgactgctcggaattggccaagaccggtaaggagtatggactaacaatgacacccgctgataaatcaccctatttcaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagatcaccaatttccattccttatccaccccactatgcccatgagggagattcatgagtccattcgttggactaaggacgcacgtaatactcaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccctggctataccaaattttgagaacttgagaagaaattggcttgagttatttt--a--atgtacagttc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaaaaa----------aa---------------------
>GQ279368.1_Human_coxsackievirus_A16_strain_SZ/HK08-3_complete_genome
------------------ttgaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---cccc-t-----aagca-gtaacttagaagc------------ttcacactatcac-gaccaa-tagtaggcgtggcgcaccagtcacgtcttgg-tcaagcacttctg-tctccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcaaca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgtggagcgcgcaccctcaatcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctactggattggccatccgg--tgaccaacagagctattgtt-----tacttg----tttatt-ggatacgtccctc-----tcaatct--------------caaagccattcaa-actcttgattacatattacttctcaa--ctgtaaga-----aatggggtcacaagtctctactcaacgatccggctcgcatgagaattcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactactacaaggatgcatatgctgcaagcgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgtcatacatgagatggctccaccgctcaagtctccaagtgctgaggcatgtggctatagtgatcgtgtggcccagcttaccattgggaattctaccatcacgacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtgtcagtgaacagatttttcacgctagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccccgatgttttgacagaggtaggtgtgtttggtcaaaatgctcagttccactacctgtatcgatctggattttgcgtgcatgtccagtgcaatgcaagtaaattccaccagggtgctttactggtggccgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggccaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgccctcaccagtggatcaacctgagaactaataattgtgcaaccatcatagttccatatatgaacacagttccatttgattcagctcttaaccactgcaattttggtttgctggtcatcccggtggtaccactggacttcaacgcaggtgccacgtccgaaattcctattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcaataaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactaccgatgatggtgtctccgcaccaattttaccaggtttccacccaactccacctatacacataccaggagaagtacacaacttattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgttttccagtgtcggtgcagagta------aaacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcgggttcattggaagtaacattcatgtttgcgggctcattcatggccacaggcaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcagacagaatcacagcaatgctagggacgcatgtgatctgggacttcggattacaatcttctgtgacgttggttgtgccatggattagcaacacacactacagggcgcacgcccgtgctgggtactttgactattacaccaccggcattataactatatggtatcaaaccaactatgtggtacctattggtgctcccactacagcatacattgtagctttggcagcagcccaggacaactttaccatgaaactatgcaaggacacggaggacattgagcaaacagctaatatacaaggggatccc--------attgcagacatgatcg---accaaaccgt--------------------------gaataaccaagtgaaccgctccttaactgcactgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagctgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagacgagatgtgtgttgaaccatcactccacacaggagacagctattgggaatttctttagccgtgctggtttggttagcatcattacaatgcccactacgggtacaca-gaacacagacggttacgttaactgggacattgatttgatgggatatgctcaattacggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggcgagctagtcccccaattactgcagtacatgtatgtcccaccgggagctccgaaacccacatccagagattcattcgcttggcaaactgctaccaacccgtctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccctttcatgtcaccagccagtgcataccaatggttttacgatggttatcctaccttcggggagcatctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattagaactgtagggactgagaagtcaccacactccattaccctgagggtatatatgaggatcaaacatgtcagagcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcagtcaggtgccatatatgtaggcaactatagggtagtgaatcggcatctcgccacacacaacgactgggcaaaccttgtatgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggaatatattactgcagctccaaaagaaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattacccagctagataccaatcccacctcatgcttgctgtaggccattcagaacctggtgactgtggtggcatcctcaggtgccaacacggtgtggtaggaattgtctccactggtggaaatggtcttgtggggttcgctgacgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtaactgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtggaggcattaaagaaccatttaattggctcagaaggggctgttgaaaggatcctgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgattatgacatggttaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacaaagcgcttcatggctaaagaagtttaatgacatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctagggaaaaagttgaattcttgaacaacctgaagcagcttccc-ttactagagaaccaaatttcaaatcttgaacagtcagctgcctcacaagaggatttagaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagtttcagccactctacgcgaccgaggctaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctccccaggaacaggcaagtcacttgctacgggcatcatagctagggccattgctgacaaatatcattctagcgtttactcactccctccagacccagatcattttgatggatacaagcaacaagtagttactgttatggatgatctttgccaaaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagactcagatgcgattcgcagacgattctacatggactgcgatatagaggtaacagactcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctttgcacggagaacaacactgccaattttaagagatgcagcccactagtgtgtggcaaagctattcaattaagagataggaaatctaaagtgagatatagcattgacactgtggtgtcagagctaatcagggagtataataataggtctgccattggtaatactatagaagccctcttccaaggaccccctaagttcaagcctataaggatt---agccttgaagagaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcggcaatactgc-agggaacaggggtggataattccagaaacaccagccaatgtggagcgtcaccttaacagagcagtgctagtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgctgggttccagggcgcttattctggcgcgcctaagcaagctctcaaaaaacccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgatcaaggacacttcaccatgttaggggtacgagaccgcctggccattctgccacgccactcgcaaccaggaaaaactatttgggtggagcacaaattaattaatgtgttagatgctgttgaattagtagatgaacagggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggacgtcaccaagtttattccagagacaatcaccggagcaagcgacgcaaccttgatcatcaacactgagcatatgccctcaatgttcgtcccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaacttccctacaaaggcgggacagtgtggaggggtagtcacctcagtcggtaagatcattggaatccacatcggtgggaacggacgccagggtttctgtgctggactgaagagaagctactttgccagtgaacagggagagatccagtggatgaagcctaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcaataaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgaacctgatgagtacgtgacacaggccgctctccactatgcaaaccagttaaagcaattagacatcaacactaataagatgagcatggaagaagcatgctatggcactgagtacctggaggccatagatctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagggacatacttgatccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttggacctgccctattccacctatgtgaaagatgagcttagatctttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacttttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccaatcctgctgccgggatcgctttttgcatttgattattcagggtatgatgcaagtctcagcccagtatggtttagagctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtcactaatagaagggatcaaccacacccaccatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgatcaataacataataatcagaactctcttgatcaaaacctttaaggggatcgatttggatgagctgaacatggtagcttacggagatgatgtgttggctagctatccattccctgttgactgctcggaattggccaagaccggtaaggagtatggactaacaatgacacctgctgataaatcaccctgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagatcaccaatttccattccttatccaccccactatgcccatgagggagattcatgagtccattcgttggactaaggatgcacgtaatactcaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccctggctataccaaattttgagaacttgagaagaaattggcttgaattatttt--a--atgtacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-gatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ354992.1_Human_coxsackievirus_A16_strain_Ningbo.CHN/028-2/2009_complete_genome
------------------ttgaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---cccc-t-----aagca-gtaacttagaagc------------ttcacactattac-gaccaa-tagtaggcgtggcgcaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcttaactgcggagcgcgtaccctcaatcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----tcaatct--------------caaggccattcaa-actcttgattatatactacttctcaa--ctgtaaga-----aatggggtcacaagtctctactcagcgatccgggtcgcacgagaactcaaactccgcatcgg-aaggctcgaccataaattacacaactataaactactacaaggatgcatatgctgcaagcgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccactcaagtctccaagcgctgaggcatgtggctatagtgatcgtgtggcccagcttaccattgggaactctaccattacgacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtgtcagtgaataggtttttcacgctagataccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaggtaggtgtatttggtcaaaatgctcagttccactacctgtatcgatctggattctgcgtgcatgtccaatgcaatgcaagtaaattccaccagggtgctttactggtggccgtgctgcccgagtacgtgctcggcactatcgcaggaggtaccgggaacg------agaattctcatcctccctacgccactacacagcctggccaggttggtgcagtcctaacgcacccttacgtgctagatgcagggatccctttgagccaactaacagtgtgccctcaccagtggatcaacctgagaaccaataattgtgcaaccattatagttccatatatgaacacagttccatttgattcagctctcaaccactgcaactttggtttgctggtcatcccggtggtaccattggacttcaacacaggtgccacgtccgaaattcctattacagtcaccatagctcccatgtgtgcggagtttgcgggcctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactaccgatgatggtgtctccgcaccaattttgccaggtttccacccaactccacctatacacataccaggagaagtacacaacttattggaaatatgcagggtggagaccatcttagaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagta------aaacgggtgagttatgtgctgcctttagagcggaccctggaagagacggtccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcgggttcattggaagtaacattcatgtttgcgggctcattcatggccacaggcaagatgctcatcgcctacaccccacctgggggaaatgtgcccgcggacagaattacagcgatgctagggacgcatgtgatctgggacttcggattacaatcttctgtgacgttggttgtgccatggattagcaacacacactacagggcgcacgcccgtgctgggtactttgactattacactaccggcattataactatatggtatcaaactaactatgtggtacctattggtgctcccactacagcatacattgtagctttggcagcagcccaggataactttaccatgaaactatgcaaggacacggaggacattgagcaaacagctaatatacaaggggatccc--------attgcagacatgatcg---accaaaccgt--------------------------gaataaccaagtgaaccgctccttaactgcactgcaagtactg--------cctacagctgccaatactgaagcaagtagtcacagattaggcaccggtgttgtaccagcactacaagctgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagacgagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggttagcatcatcacaatgcccaccacgggtacaca-gaacacagacggttacgttaactgggacattgatttgatgggatatgctcaattacggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacattcgttgtagccaagcccaatggtgagctagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacccacatccagagactcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttatcccaccttcggggagcatctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattagaactgtagggattgagaagtcaccacactccatcaccctgagggtatatatgaggattaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------gagtttgggcagcagtcaggtgccatatacgtaggcaactatagggtagtgaatcggcatcttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggaatatattattgcagctccaaaagaaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattacccagctagataccaatcccacctcatgcttgctgtaggccattcagaacctggtgactgtggtggcatcctcaggtgccaacacggtgtggtaggaattgtctccactggtggaaatggtcttgtggggttcgctgacgtcagagatcttctgtggctggatgaagaagcaatggaacaaggagtatctgactatattaaa-ggccttggtgatgcttttggtatgggcttcactgatgcagtgtccagggaagtggaagcattgaagaaccatttaattggttcagaaggggctgttgaaaagatcctgaagaacctagtgaagctaatttcagctttagtcatagttgttaggagtgattacgacatggtcaccctcacagctacgcttgccttgattggatgtcatgggagcccttgggcatggataaaagtgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctaaagagaaagttgaattcttgaacaacctgaagcagcttcca-ttactggagaaccaaatttcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtatcatatttggccca---------tttctgccgcaagtttcagccactctacgcgactgaagctaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcattagaggctccccaggaacaggcaagtcacttgctacgggcatcatagccagggccattgctgacaaatatcattctagcgtttactcactccctccagacccagatcatttcgatggatacaagcaacaggtagttactgttatggatgatctctgtcaaaacccagatggaaaagacatgtcactattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagactcagatgcgattcgcagacgattctatatggactgcgatatagaggtaacagactcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctttgcacggagaacaacaccgccaattttaagagatgcagcccattagtgtgtggcaaagctattcaattaagagataggaaatctaaagtgagatatagcattgatactgtggtgtcagaactaatcagggagtataataataggtctgccattggtaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagagaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcggcaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggagcgtcaccttaatagagcagtgctagtggtgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgctgggttccagggcgcttattctggtgcgcctaagcaagctctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagtttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgatcaaggacacttcaccatgttaggggtacgagaccgcctggccgttctgccacgccactcgcaaccaggaaaaactatttgggtggagcacaaattaattaatgtgttagatgctgttgagttagtagatgagcagggtgtgaacttggaactcacactaataactctagacaccaacgaaaagtttagggacgtcaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttaatcatcaacactgagcatatgccctcaatgttcgtcccggtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacgcaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggggtagtcacctcagtcggtaagatcattggaatccacatcggtgggaacggacgccagggtttctgtgctggactgaagagaagctactttgccagtgaacagggagagatccagtggatgaagcctaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtatattccatgatgtgtttgagggcaataaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgaacaagcattgttttccaagtatgtgggaaacaccctgcacgaacctgatgagtacgtgacacaggccgctctccactatgcaaaccagttaaagcaattagatattaacactaataagatgagcatggaagaagcatgctatggcactgaatacctggaagccatagacctgcacactagtgctgggtacccctatagtgccttgggtgttaagaaaagggacatactcgatccaatcactagagataccaccaaaatgaaattctacatggataaatatgggttggatttgccctattccacctatgtgaaagatgaacttagatctttagataagattaagaagggaaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacttttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaattaccgatcctgctgccgggatcgctttttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagatcggttactcagaggaggctgtgtcactaatagaagggatcaaccatacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggtacttccatcttcaattccatgattaataacataataatcagaaccctcttgatcaaaacctttaaggggatcgatttggatgagttgaacatggtagcttacggagatgatgtgttggctagctatccattccctgttgattgctcggagttggctaagactggcaaggagtatggactaacaatgacacctgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagatcaccaatttccattccttatccaccccaccatgcccatgagggagatccatgagtccatccgttggactaaggacgcacgtaatactcaggaccacgtgcgctccttgtgccttttagcatggcataatggaaaggaggagtacgaaaaatttgtgagtacaattagatcagttcctgttgggaaagccctggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-gatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF055240.1_Coxsackievirus_A16_strain_changchun029_complete_genome
-----------------------------------------------ccactcaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---cccc-t-----aagca-gtaacttagaagc------------ttcacactatcac-gaccaa-tagcaggcgtggcgcaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaagcgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-taccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgtaccctcaatcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----tcaatct--------------caaggtcattcaa-actcttgattatatactacttctcaa--ctgtaaga-----aatggggtcgcaagtctctactcagcgatccgggtcacatgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactactacaaggatgcatatgctgcaagcgcagggcgccaggatacgtcccaagacccgaagaaatttaccgaccctgttatggacgttatacatgagatggctccaccgcttaagtctccaagcgctgaggcatgtggctatagtgatcgtgtggcccagcttaccattgggaattctaccatcacgacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgatgtgtcagtgaacagatttttcacgctagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgtcttgacagaggtaggtgtgtttggtcaaaatgctcagttccactacctgtatcgatctggattttgcgtgcatgtccagtgcaatgcaagtaaattccaccagggtgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctatgccactacacagcctggccaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagtcaattaactgtgtgccctcaccagtggatcaacctgagaaccaataattgtgcaaccattatagtcccatatatgaacacagttccatttgactcagctctcaaccactgcaactttggtttgctggtcatcccggtggtaccactggacttcaacacaggtgccacgtctgaaatccctattacagtcaccatagctcccatgtgtgcggaatttgcgggcctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactaccgatgatggtgtctccgcaccaattttgccaggttttcaccctactccacccatacacataccaggagaagtacacaacttgttggaaatatgcagagtggagactatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcaacgcttgtgctttccagtgtcggtgcagagta------aaacgggcgagttatgtgctgcctttagagctgaccctggaagagatggtccgtggcagtccacaatattgggccaactctgcaggtactacacccagtggtcgggttcattggaagtaacattcatgtttgcgggttcattcatggctacaggcaagatgctcatcgcctataccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctagggacgcatgtgatctgggatttcggattacaatcttctgtgacgttggttgtgccatggattagcaacacacactacagggcgcacgcccgtgctgggtactttgactactacaccaccggcattataactatatggtatcaaactaactatgtggtgcctattggtgctcccactacagcatacattgtagctttggcagcagcccaggacaactttaccatgaaactatgcaaggacacggaggacattgaacaaacagctaatatacaaggggatcct--------attgcagacatgatcg---accaaaccgt--------------------------gaataaccaagtgaaccgctccttaactgcactgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagctgcggagacaggagcgtcgtcaaatgctagtgacaagaatctcattgagacgagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggttagcatcatcacaatgcccaccacgggtacaca-gaacacagacggttacgtgaactgggacattgatttgatgggatatgctcaattacggcgcaagtgcgagctgttcacatatatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggcgaactagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacccacatccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaagatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttatcccaccttcggggagcatctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagtattagaactgtagggactgagaagtcaccacactccattaccctgagggtatatatgaggattaaacacgttagagcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------actggga------------------------------------------aagtttggacagcagtcaggtgccatatatgtaggcaactatagggtagtgaatcggcatcttgccacacataacgactgggcgaaccttgtgtgggaggacagttccagggacttgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggaatatattattgcagctccaaaaggaaacactacccggttagtttcaccaaacccagcctgatatttgtggaggctagtgagtattacccagctagataccaatcccacctcatgcttgctgtaggccattcagaacctggtgactgtggtggcatcctcaggtgccaacatggtgtggtaggaattgtctccactggtggaaatggtcttgtggggttcgctgatgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactacatcaaa-ggcctcggtgatgctttcggaatgggtttcactgatgcagtgtctagggaagtggaggcattgaagaaccatttaatcggctcagaaggggctgttgaaaagatcctgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgattatgacatggtcacccttacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctaaagagaaagttgaattcttgaacaacctgaagcagcttccc-ttactggagaaccaaatttcaaatcttgaacagtctgctgcctcgcaggaggatttagaagctatgtttggtaatgtgtcatatttggctca---------tttctgccgcaagttccagccactctacgcgaccgaagctaaaagagtctatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctctccaggaacaggcaagtcacttgctacgggcatcatagctagggccattgctgacaaatatcattctagcgtttactcgctccccccagacccagatcattttgatggatacaagcaacaagtagttactgttatggatgatctttgtcaaaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggatttcataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagactcagatgcgattcgtagacgattctacatggactgcgatatagaggtgacagactcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctttgcacggagaacaacaccgccaattttaagagatgcagcccactagtgtgtggcaaagctattcaattaagagacaggaaatctaaagtgagatatagcattgatactgtggtgtcagaattaatcagagagtataataataggtctgccattggtaacactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagagaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcggcaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggagcgtcacctcaacagagcagtgctagtgatgcaatccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgccgggtttcagggtgcttactctggcgcgcctaagcaagctctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgctttatcccttttaaggcgtaatattagacaggtgcaaactgatcaagggcactttaccatgttaggggtacgagaccgcctggccatcctgccacgccactcgcaaccaggaaaaactatttgggtggagcacaaattaattaatgtgttagatgctgttgaattagtagatgaacagggtgtgaacttggaactcacactaataactttagacactaacgaaaagtttagagacgtcaccaaatttattccagagacaatcaccggggcaagcgacgcaaccttgatcatcaacactgagcatatgccctcaatgttcgtcccagtgggtgatgttgtgcaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaattttcctacaaaggcaggacagtgtggctgggtagtcacctcagtcggtaagatcattggaatccacatcggtgggaacggacgccagggtttctgcgctggactgaagagaagctactttgccagtgaacagggagagatccagtggatgaagcctaataaagagactgggagactgaacattaatggcccaacccgcaccaaattggagcccagtgtattctatgatgtgtttgagggcagtaaagaaccagcggtcttaaccagtaaggaccccagactcgaggttgattttgagcaagctttgttttctaagtatgtgggaaacaccctgcacgaacctgatgagtacgtgacacaggctgctctccactatgcaaaccagttaaagcaattggacatcaacactaataagatgagcatggaagaagcatgctatggcactgaacacctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttaggtgttaagaagagggacatactcgatccaatcactagagataccaccaaaatgaaattctacatggataaatatgggttggacttaccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgtctgattgaagccagcagcctgaatgactcagtttacctcaggatgacttttggacatctctatgaaacttttcatgccaacccggggactgtgactggatccgcagtagggtgcaatcctgatgtgttttggagcaaactaccgatcctactgccaggatcgctttttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctctagaggtggttctccgtgagatcggctactcagaggaggctgtgtcactaatagaagggatcaaccacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggatgttccggcacttccatcttcaattccatgattaataacataataatcagaactctcttgatcagaaccttcaaggggatcgatttggatgagttgaacatggtagcttacggagatgatgtattggctagctatccattccctgttgactgctcggagttggccaaaactggtaaagagtatggactaacaatgacacctgctgacaagtcaccctgcttcaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagatcatcaatttccattccttattcaccccaccatgcccatgagggagatccatgagtccattcgttggactaaggatgcacgtaatactcaggatcatgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttagctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagccc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaaa-g-actg--------gtgggggtaaat--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM055004.1_Coxsackievirus_A16_strain_Laos2011_HFMD4V_partial_genome
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaatcca-gtggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tgtt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tatctg----ttcatt-gggtgcgtccctc-----tcaatct--------------caaggtcattcaa-actcttgattatatactatttctcaa--ttgtaaga-----aatggggtcacaagtctctactcagcgatccgggtcgcatgagaactcaaattctgcatctg-aaggctcaaccataaattacacaactataaactactacaaggatgcatacgctgcaagcgcagggcgccaggatatgtcccaagacccgaagaagtttaccgaccctgttatggacgttatacatgagatggctccaccgctcaagtctccaagtgctgaggcatgtggctatagtgatcgtgtggcccaacttactattgggaattctaccatcacgacgcaggaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtgtcagtaaacagatttttcacgctagacactaaatcttgggctaagg------------------attcaaagggatggtattggaaattccctgatgttctaacagaggtaggtgtgtttggtcaaaatgctcagttccactacctgtatcgatctgggttttgcgtgcatgtccagtgcaatgcaagtaaattccaccagggtgctttactggtggccgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------aaaactcccatcctccctatgccaccacacagcctggccaggttggtgcagttctgacgcacccctacgtgctagatgcagggatccctttgagccaattaactgtgtgccctcaccagtggatcaacctgagaaccaataattgtgcaaccattatagtcccatatatgaacacagttccgtttgactcagctcttaaccactgcaattttggtttactggtcatcccggtggtaccattggacttcaacacaggtgccacgtctgaaattcctattacagtcaccatagctcccatgtgcgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaagcctggcaccaatcagtttctcactaccgatgatggtgtctcagcaccaattttaccaggtttccacccaactccacctatacacataccaggggaagtacacaacttgttggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagactaccccc------atgcagcgcttgtgttttccggtgtcggtgcagagta------aaacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggtcaactctgcaggtactacacccagtggtcgggttcgttggaagttacattcatgtttgcgggctcatttatggccacaggcaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacgcacgtgatctgggacttcggattacaatcttctgtgacgttggttgtgccatggattagcaacacacactatagggcgcacgcccgtgctgggtactttgactattacaccactggcattataactatatggtatcaaactaactatgtggtgcctattggtgctcccactacagcatacattgtagctttagcagcagcccaggacaacttcactatgaaactgtgcaaggacacggaagacattgagcaaacagctaatatacaaggggatccc--------attgcagacatgatcg---accaagccgt--------------------------gaataatcaagtgaaccgctccttaactgcgttgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagctgcggagacaggagcgtcgtcaaacgctagtgacaagaatctcattgagacgagatgcgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggttagcatcatcacaatgcccaccacgggtacaca-gaacacggacggttacgtcaactgggacattgatttgatgggatatgctcaactgcggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacatttgttgtggccaaacccaacggtgagctagtcccccaattactgcagtatatgtatgtcccaccaggggctccaaaacccacatccagagattcattcgcttggcaaactgccaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccctttcatgtctccagccagtgcataccaatggttttacgatggttatcccacctttggggagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattagaactgtggggactgagaagtcaccacactccattaccctgagggtatatatgaggattaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccctacttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagataagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcagtcaggtgccatatatgtaggcaactatagggtagtgaatcggcatcttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgtgacactatcgctagatgcaattgtcaaaccggagtatattattgcagctccaaaaggaaacactacccggttagtttcactaagcccagcctggtatttgtggaggctagtgagtattacccagctaggtaccaatctcacctcatgcttgctgttggccattcagaacctggtgactgtggtggcatccttaggtgccaacacggtgtggtgggaattgtctccactggtggaaatggtcttgtgggctttgctgacgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtggaagcattgaagaaccatttaatcggctcagaaggggctgttgaaaagatcctgaaaaacttggtaaagctaatttcagctttagtcatagtcgttaggagcgactatgacatggtcaccctcacagctacgctcgccttgattgggtgccatggaagcccttgggcatggataaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggctaacgctgcaaagggacttgagtggatctctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctaaagagaaagttgaattcttgaacaacctgaagcagcttccc-ttactggagaaccaaatttcaaatcttgaacagtctgctgcctcgcaagaggatctagaggccatgtttggcaatgtgtcatacttggccca---------tttctgccgcaagtttcagccactttatgcggccgaagctaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcatcagaggttccccaggaacaggcaagtcacttgctacgggtatcatagctagagctattgctgacaaatatcattctagcgtttactcactccctccagacccagaccattttgatggatataagcaacaagtagtcactgttatggatgatctttgccaaaacccagatggaaaggacatgtcactattttgtcagatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtcttttacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcccacagtttcagactcagatgcgattcgcagacggttctacatggactgcgatatagaggtaacagactcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctctgcacggagaacaacaccgccaattttaagagatgcagcccgttagtgtgtggcaaagctattcaattaagagacaggaaatctaaagtgagatatagcattgatactgtagtgtcagagctaatcagagagtataataacaggtctgccattggtaatactatagaagccctcttccaaggaacccccaagttcaagcctataagaatt---aaccttgaagagaaaccagccccggatgccattagtgacctacttgctagtgtggatagcgaagaggttcggcaatactgc-agggaccaggggtggataattccagaaacgccggccaatgtggagcgtcaccttaacagagcagtgctagtgatgcagtccatcgccaccgtggttgcagttgtatcccttgtctatgttatttacaaactgttcgctgggtttcagggtgcttattctggcgtgcccaagcaagctctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttggactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgatcaaggacacttcaccatgttaggggtacgagaccgcctggctattctgccacgccactcgcaaccaggaaaaactatctgggtggagcacaaattaattaatgtgttagatgctgttgagttagtagatgagcaaggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggacgtcaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttgatcatcaacactgagcacatgccctcaatgttcgtcccagtgggtgatgttgtacaatatggatttctgaacctcagcggtaagcccacacatcgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggggtagtcacctcagttggtaagatcattggaatccacattggtgggaacggacgccagggtttttgtgctggactaaagagaggctactttgccagtgaacagggagaaatccagtggatgaagtctaacaaagagactgggagactgaacattaacggcccaacccgtaccaaattggagcccagtgtatttcatgatgtgtttgagggtagtaaagaaccagcagtcttaactagtaaggatcccagacttgaggttgattttgagcaagctttattttccaagtatgtgggaaacaccctgcatgagcctgatgaatacgtgacacaggctgctcttcactatgcaaaccagttaaagcaattagacatcaacactaataagatgagcatggaagaagcatgctatggcactgaatacctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttaggtgttaagaaaagggatatacttgatccaatcaccagagataccaccaaaatgaaattctacatggacaagtatgggttggacttgccctattccacctatgtgaaagatgagcttagatccctagataagattaagaagggaaaatcccgtttgattgaagccagcagcctgaacgactcagtctaccttaggatgacttttgggcatctctatgagacttttcatgccaacccggggactgtgaccggatctgcagtagggtgcgatcctgatgtgttttggagtaaactaccgatcctgctgccgggatcgctttttgcatttgattattcagggtatgatgcaagtctcagtccagtgtggtttagagctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtcactaatagaagggatcaaccacacgcatcatgtgtatcggaacaagacatactgtgtccttggtggaatgccctcaggatgttccggcacttccatcttcaattccatgattaataacataataatcagaactctcttgatcaaaacttttaaggggatcgatttggatgagttgaacatggtagcttacggagatgatgtgttggctagctatccattccctattgactgctcggagttggcaaagactggcaaagagtatggactaacaatgacacccgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgctacatttttaaagagaggcttcttgccagatcaccaattcccattccttatccaccccaccatgcccatgagggagatccatgagtccattcgctggactaaggatgcacgtaatactcaggatcacgtgcgctccttgtgccttttagcatggcataacgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgtaaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------a----------------------------------------------------------------------------------------------------------
>JF738004.1_Human_coxsackievirus_A16_isolate_THA-CA16-069_complete_genome
----------------------------------------------------------------------------------------------------------ct-g-ttttata-----acccc---t---cccc-t-----aagca-gtaacttagaagc------------ttcacactatcac-gaccaa-tagtaggcgtggcgcaccagtcacgtcttgg-tcaagcacttctg-tctccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaagcgttcgttatccggctaactacttcgagaaact-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccctc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaatcca-gtggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctattgtt-----tatctg----ttcatt-gggtacgtccctc-----tcaatct--------------caaggtcattcaa-actcttgattatatactacttctcaa--ttataaga-----aatggggtcacaagtctctactcagcgatccgggtcgcatgagaactcaaattctgcatctg-aaggctcaaccataaattacacaactataaactactacaaggatgcatacgctgcaagcgcagggcgccaggatatgtcccaagacccgaagaagtttaccgaccctgtcatggacgtcatacatgagatggctccaccgctcaagtctccaagtgctgaggcatgtggctatagtgatcgtgtggcccaacttactattgggaattctaccatcacgacgcaggaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtgtcagtgaacagatttttcacgctagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccccgatgttctgacagaggtaggtgtgtttggtcaaaatgctcagttccactacctgtatcgatctggattttgcgtgcatgtccagtgcaatgcaagtaaattccaccagggtgctttactggtggccgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccaccacacagcctggccaggttggtgcagtcctgacgcacccctacgtgctagatgcagggatccctttgagccaattaactgtgtgccctcaccagtggatcaacctgagaactaataattgtgcaaccattatagttccatacatgaacacagttccatttgattcagctcttaaccactgcaattttggtttgctggtcatcccggtggtaccactggacttcaacgcaggtgccacgtccgaaattcctattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggcaccaatcagtttctcactaccgatgatggtgtctctgcaccaattttaccaggtttccacccaactccacctatacacataccaggggaagtacacaacttattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgttttccggtgtcggtgcagagta------aaacgggcgaattatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcgggttcgttggaagttacattcatgtttgcgggctcatttatggccacaggcaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacgcacgtgatctgggacttcggattacaatcttctgtgacgttggttgtgccatggattagcaacacacactacagggcgcacgcccgtgctgggtactttgactattacaccaccggcattataactatatggtatcaaactaactatgtggtacctattggtgctcccactacagcatacattgtagctttggcagcagcccaggacaactttaccatgaaactatgcaaggacacggaagacattgagcaaacagctaatatacaaggggatccc--------attgcagacatgatcg---accaagccgt--------------------------gaataatcaagtgaaccgctccttaactgcgttgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagctgcggagacaggagcgtcgtcaaacgctagtgacaagaatctcattgagacgagatgcgtgttgaaccatcactccacacaggagacagctattgggaatttctttagccgtgctggtttggttagcatcattacaatgcccactacgggtacaca-gaacacggacggttacgtcaactgggacattgatttgatgggatatgctcaactgcggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacatttgttgtggccaaacccaacggcgagctagtcccccaattactgcagtatatgtatgtcccaccaggggctccaaaacccacatccagagattcattcgcttggcaaactgccaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccctttcatgtctccagccagtgcataccaatggttttacgatggttatcccaccttcggggagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattagaactgtggggactgagaagtcaccacactccattaccctgagggtatatatgaggattaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcagtcaggtgccatatatgtaggcaactatagggtagtgaatcggcatcttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgtgacactatcgctagatgcaattgtcaaaccggagtatattattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattacccagctagataccaatctcacctcatgcttgctgttggccattcagaacctggtgactgtggtggcatccttaggtgccaacacggtgtggtgggaattgtctccactggtggaaatggtcttgtgggctttgctgacgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtaactgactatatcaaa-ggcctcggtgatgcttttggtacgggtttcactgatgcagtgtctagggaagtggaggcattgaagaaccatttaatcggctcagaaggggctgttgaaaagatcctgaaaaacttggtgaagctaatttcagctttagtcatagtcgttaggagcgactatgacatggtcaccctcacagctacgcttgccttgattgggtgccatggaagcccttgggcatggataaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggctaacgctgcaaagggacttgagtggatctctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctagggaaaaagttgaattcttgaacaacctgaagcagcttccc-ttactggagaaccaaatttcaaatcttgaacagtctgctgcctcgcaagaggatttagaggccatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagtttcagccactttacgcgaccgaggctaaaagagtttatgccttagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcatcagaggctccccaggaacaggcaagtcacttgctacgggcatcatagctagggccattgctgacaaatatcattctagcgtttactcactccctccagacccagatcattttgatggatacaagcaacaagtagtcactgttatggatgatctttgccaaaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcccacagtttcagactcagatgcgattcgcagacggttctacatggactgcgatatagaggtaacagactcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctctgcacggagaacaacaccgccaactttaagagatgcagcccattagtgtgtggcaaagctattcaattaagagacaggaaatctaaagtgagatatagcattgatactgtggtgtcagagctaatcagggagtataataacaggtctgccattggtaatactatagaagctctcttccaaggaccccctaagttcaagcctataaggatt---agccttgaagagaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaagaggttcggcaatactgc-agggaccaggggtggataattccagaaacgccggccaatgtggagcgtcaccttaacagagcagtgctagtgatgcagtccatcgccaccgtggttgcagttgtgtcccttgtctatgttatttacaaattgttcgctgggtttcagggtgcttattctggcgtgcccaagcaagctctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgatcaaggacacttcaccatgttgggggtacgagaccgcctggctattctgccacgccactcgcaaccaggaaaaactatctgggtggagcacaaattaattaatgtgctagatgctgttgagttagtagatgagcaaggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggacgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttgatcatcaacactgagcacatgccctcaatgttcgtcccagtgggtgatgttgtacaatatggatttctgaacctcagcggtaagcccacacatcgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggggtagtcacctcagttggtaagatcattggaatccacattggtgggaacggacgccagggtttctgtgctggactgaagagaggctactttgccagtgaacagggagaaatccagtggatgaaatctaacaaagagactgggagactgaacattaacggcccaacccgtaccaaattggagcccagtgtatttcatgatgtgtttgagggcagtaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgaacctgatgaatacgtgacacaggctgctctccactatgcaaaccagttaaagcaactagacatcaacactaataagatgagcatggaagaagcatgctatggcactgagtacctggaggccatagatctgcacaccagtgctgggtatccttatagtgccttaggtgttaagaaaagggatatactcgatccaatcactagagataccaccaaaatgaaattctacatggacaagtatgggttggacttaccctattccacctatgtgaaagatgagcttagatccttagataagattaagaagggaaaatcccgtttgattgaagccagcagtctgaacgactcagtctaccttaggatgacttttgggcatctctatgagacttttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccaatcctgctgccgggatcgctttttgcatttgattattcagggtatgatgcaagtctcagtccagtgtggtttagagctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtcactaatagaagggatcaaccacacccaccatgtgtatcggaacaagacatactgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgattaataacataataatcagaactctcttgatcaaaacttttaaggggatcgatttggatgagttgaacatggtagcttacggagatgatgtgttggctagctatccattctctattgactgctcggagttggcaaagactggcaaagagtatggactaacaatgacacccgctgacaaatcaccctgctttaacgaagtcacctgggagaatgctacattcttaaagagaggcttcctgccagatcaccaatttccattccttatccaccccactatgcccatgagggagattcatgagtccattcgctggactaaggacgcacgtaatactcaggatcacgtgcgctccttgtgccttttagcatggcataacgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtggg---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC755229.1_Coxsackievirus_A16_isolate_ZJ10-73_polyprotein_gene_complete_cds
--tacaaaaaagcaggctttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t--ccccc-t-----aagca-gtaacttagaagc------------tccacactatcac-gaccaa-tagcaggcgtggtgcaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgtaccctcaatcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--taaccaacagagccattgtt-----tacctg----tttgtt-ggatacgtccctc-----tcaatct--------------caaggccattcaa-actcttgattatatactacttctcaa--ctgtgaga-----aatggggtcacaggtctctactcagcgatccggatcgcatgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactattacaaggatgcatatgctgcaagcgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggatgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggctatagtgatcgtgtggcccaacttactattgggaattctaccatcacgacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtgtcagtgaatagatttttcacgctagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttaacagaggtgggtgtgttcggtcaaaatgctcagttccactacctgtatcgatctggtttttgcgtgcatgttcagtgcaatgcaagcaaattccaccagggtgctttactggtggccgtgctgcctgagtatgtgctcggcactatcgcaggagggaccggaaacg------agaattctcatcctccctacgccaccacacagcctggccaggttggtgcagtcctaacacacccttacgtgctagatgcagggatccctttgagtcaattaactgtgtgccctcaccagtggatcaacctgagaaccaataattgtgcaaccattatagttccatacatgaacacagttccatttgattcagctctcaaccactgcaactttggtttgctggtcgtcccggtggtaccgttggacttcaacacaggtgccacgtctgaaattcctattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaagcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactaccgatgatggtgtctccgcaccaattttaccaggtttccatccaactccacctatacacataccaggagaagtacacaacttattggaaatatgcagagtggagactatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcaacgcttgtgctttccggtatcggtgcagagta------aaacgggcgagttatgtgctgcctttagagctgatcctggaagagatggtccgtggcagtccacaatactgggccagctctgcaggtattatacccagtggtcgggttcactggaagtaacattcatgtttgcgggctcattcatggccacaggtaagatgctcatcgcctataccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctagggacgcatgtgatctgggacttcggattacaatcctctgtgacgttggttgtgccatggattagtaacacacactacagggcgcacgcccgtgctgggtactttgactattacaccaccggcattataactatatggtatcaaaccaactatgtggtacctattggtgctcccactacagcatacattgtagctttggcagcagcccaggacaactttaccatgaaactatgcaaggacacggaggacattgagcaaacagctaatatacaaggggatccc--------attgcagacatgatcg---accaaaccgt--------------------------gaataaccaagtgaaccgctccttaactgcactgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattgggcactggtgttgtgccagcactacaagctgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagacaagatgtgtgttgaatcatcactccacacaggagacagccattgggaatttctttagccgtgctggtctggttagcatcattacaatgcccaccacgggtacaca-gaacacagacggttatgtcaactgggacattgacttaatgggatatgctcaattacggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacatttgtcgtagccaagcccaatggtgagctagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacccacatccagagattcattcgcttggcaaactgctaccaacccatctgtgttcgtaaaaatgacggacccaccagctcaagtatcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttaccccaccttcggggagcatctccaagcaaatgacctagattatggccaatgcccgaataacatgatgggcacttttagtattagaactgtagggaccgagaagtcaccacactccatcaccctgagggtatacatgaggattaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccatatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------actggga------------------------------------------aagtttgggcagcagtcaggcgccatatatgtgggcaactatagggtagtgaatcggcatcttgccacacacaacgattgggcaaacctagtgtgggaggacagttctagggacttgttagtctcttctaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaactgggatatattattgcaactccaaaaggaaacactacccggttagtttcaccaagcccagcatgatatttgtggaggctagtgaatattacccagctagataccaatcccacctcatgcttgctgtaggccattcagaacctggtgattgtggtggcatcctcaggtgtcaacacggtgtggtaggaattgtctccactggaggaaatggccttgtggggttcgctgacgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtggaggcattgaagaatcatttaattggctcagaaggggctgttgagaagatcctgaagaacttggtgaagctaatttcagctttagtcatagttgttaggagtgattatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagtgcttcatggttaaagaagtttaatgacatggctaacgctgcaaagggacttgagtggatctctagtaaaatcagcaagttcattgactggcttaaggaaaagattattccagccgctaaagagaaagttgaattcttgaacaacttgaaacagcttccc-ttactggagaaccaaatttcaaatcttgaacagtccgctgcctcgcaggaggatctagaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagttccagccactctacgcgaccgaagctaaaagagtctatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctccccaggaacaggcaagtcacttgctacgggcatcatagctagggccattgctgacaaatatcattctagcgtttactcactccctccagacccagatcactttgatggatacaagcaacaagtagttactgttatggatgacctttgtcaaaaccctgatggaaaggacatgtcactattttgccagatggtttctacagtggatttcataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagtccctacagtttcagactcagatgcgattcgcagacgattctacatggactgcgacatagaggtgacagactcctacaagacggaccttggtcgacttgacgcaggtagggccgctaagctttgcacggagaacaacaccgccaattttaagagatgcagcccactagtgtgtggcaaagctattcaattaagagacagaaaatctaaagtgagatatagcattgatactgtggtgtcagaactaatcagagagtataataataggtctgccattggtaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagaaaagccagccccagatgccatcagcgacctactagctagtgtggatagcgaggaggttcgacaatactgc-agggaacaggggtggataatcccagaaacaccggccaatgtggagcgtcacctcaacagagcggtgctagtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgccgggtttcagggtgcttattctggcgcgcccaagcaagctctcaaaaagcccgtgctaagaacagccacagttcaaggcccgagcttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgatcaaggacactttaccatgttaggggtacgagaccgcctggccattctgccacgccactcacaaccaggaaaaactatttgggtggagcacaaattagtcaatgtgttagatgctgttgaattagtggatgagcagggtgtgaacttggaactcacactaataactttagacactaacgaaaaatttagggacgtcaccaagtttgtcccagagacaatcaccggggcaagcgacgcaaccttgatcatcaacactgagcatatgccctcaatgttcgtcccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcagggcagtgtgggggggtagtcacctcagtcggtaagatcattggaattcacatcggtgggaacggacgccagggtttctgcgctggactgaagagaagctactttgctagtgaacagggagagatccagtggatgaagcctaataaagagactgggagattgaacattaatggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcagtaaagaaccagcagttttaaccagtaaggatcccagactcgaggttgatttcgagcaagctttgttttccaagtatgtgggaaacatcctgcatgagcctgatgagtacgtaacacaggccgctctccactatgcaaaccagttgaagcaactggacatcaacactaataagatgagcatggaagaagcatgctatggcactgaatacctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagggacatactcgatccaatcactagagataccaccaaaatgaaattctacatggataaatatgggttggacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctttatgaggcttttcatgccaacccagggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccgggatcgctttttgcattcgattattcgggatatgatgcaagtctcagcccagtgtggtttagggctttagaggtggtcctccgtgagatcggctactcagaggaggctgtgtcactgatagaagggatcaatcacacccaccatgtgtatcggaacaagacatattgcgtcctcggtggaatgccctcaggctgttccggtacctccatcttcaattccatgattaacaacataataatcagaactctcttgatcaaaacctttaaggggatcgacttggatgagttaaacatggtagcttacggagatgatgtgttggctagctatccattccctgttgactgctcggaattggccaaaactggtaaagagtatggactaacaatgacacctgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagatcaccaatttccattccttatccaccccaccatgcccatgagggagatccatgagtccattcgttggactaaggatgcacgcaacacacaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggagagccttggctataccaaattttgagaacttgagaagaaattggcttgaattatttt--a--atatacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaaaa----------------------------------
>KC755230.1_Coxsackievirus_A16_isolate_AH10-2_polyprotein_gene_complete_cds
--------------ggctttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattttgcgggatctttgtgcgcct-g-ttttata-----acccc---t--ccccc-t-----aagca-gtaacttagaagc------------tccacactatcac-gaccaa-tagcaggcgtggtgcaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaact-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaatcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tacctg----tttgtt-ggatacgtccctc-----tcaatct--------------caaggccattcaa-actcttgattatatactacttctcaa--ctgcaaga-----aatggggtcacaagtctctactcagcgatccggatcgcatgagaactcaaactctgcatcag-aaggctcaaccataaattacacaactataaactactacaaggatgcatatgctgcaagcgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggctatagtgatcgtgtggcccagcttactattgggaattctaccatcacgacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtgtcagtgaacagatttttcacgctagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttaacagaggtgggcgtgttcggtcaaaatgctcagttccactacctgtaccgatctggattttgcgtgcatgttcagtgcaatgcaagcaaattccaccagggtgctttactggtggccgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccaccacacagcctggccaggttggtgcagtcctgacacacccttacgtgctagatgcagggatccctttgagtcaattaactgtgtgccctcaccagtggatcaacctgagaaccaataattgtgcaaccattatagttccatacatgaacactgttccatttgattcagctctcaaccactgcaactttggtttgctggtcgtcccggtggtaccgttggacttcaacacaggtgccacgtctgaaattcctattacagttaccatagctcccatgtgtgcggaatttgcgggcctgcgccaagcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactaccgatgatggtgtctccgcaccaattttaccaggtttccatccaactccacctatacacataccaggagaagtacacaacttattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcaacgcctgtgctttccagtgtcagtgcagagta------aaacgggcgagttatgtgctgcctttagagctgatcctggaagagatggtccgtggcagtccacaatactgggccagctctgcaggtactacacccagtggtcgggttcactggaagtaacattcatgtttgcgggctcattcatggccacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcgatgctagggacgcatgtgatctgggacttcggattacaatcctctgtgacgttggttgtgccatggattagcaacacacactacagggcgcacgcccgtgctgggtactttgactattacaccaccggcattataactatatggtatcaaaccaactatgtggtacctattggtgctcccactacagcgtacattgtagctttggcagcagcccaggacaactttaccatgaaactatgcaaggacacggaggacattgagcaaacagctaatatacaaggggatccc--------attgcagacatgatcg---accaaaccgt--------------------------gaataaccaagtgaaccgctccttaactgcactgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattgggcactggtgttgtgccagcactacaagctgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagacaagatgtgtgttgaatcatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggttagcatcattacaatgcccaccacgggtacaca-gaacacagacggttacgtcaactgggacattgacttaatgggatatgctcaattacggcgcaaatgcgagttgtttacatatatgcgctttgatgctgaattcacatttgtcgtagccaagcccaatggtgagctagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacccacatccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttaccccaccttcggggagcatctccaagcaaatgacctagattatggccaatgtccgaataacatgatgggcacttttagtattagaactgtagggaccgagaagtcaccacactccattaccctgagggtatatatgaggattaaacacgtcagagcatggatcccaaggcctctgaggaaccaaccctatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------actgggg------------------------------------------aagtttgggcagcagtcaggtgccatatatgtgggcaactatagggtagtgaatcggcatcttgccacacacaacgattgggcaaaccttgtgtgggaggacagttctagggacttgttagtctcttctaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaactgggatatattattgtaactccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgaatattacccagctagataccaatcccacctcatgcttgctgtaggccattcagaacctggtgactgtggtggcatcctcaggtgccaacacggtgtggtaggaattgtctccactggaggaaatggccttgtggggttcgctgacgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtggaggcattaaagaatcatttaattggctcagaaggggctgttgagaagatcctgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgattatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggttaaagaagtttaatgacatggctaacgctgcaaagggacttgagtggatctctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctaaagagaaagttgaattcttgaacaacctgaaacagcttccc-ttactggagaaccaaatttcaaatcttgaacagtctgctgcctcgcaggaggatctagaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagttccagccactctacgcgaccgaagccaaaagagtctatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctccccaggaacaggcaagtcacttgctacgggcatcatagctagggccattgctgacaaatatcattctagcgtttactcactccctccagacccagatcattttgatggatacaagcaacaagtagttactgttatggatgacctttgtcaaaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgtcgcatcgaccaatgctagcaacatagtagttcctacagtttcagactcagatgcaattcgcagacgattctacatggactgcgacatagaggtgacagactcctacaagacggaccttggtcgacttgacgcaggtagggccgctaagctttgcacggagaacaacaccgccaattttaagagatgcagcccactagtgtgcggcaaagctattcaattaagagacagaaaatctaaagtgagatatagcattgatactgtggtgtcagaactaattagagagtataacaataggtctgccattggtaatactatagaagccctcttccaaggaccccttaagttcaagcctataagaatt---agccttgaagaaaagccagccccagatgccatcagcgacctactagctagtgtggatagcgaggaggttcggcaatactgc-agggaacaggggtggataatcccagaaacaccggccaatgtggagcgtcacctcaacagagcggtgctagtgatgcagtccatcgccaccgtggttgcagttgtgtcccttgtctatgttatttacaaattgttcgccgggtttcagggtgcttattctggcgcgcctaagcaagctctcaaaaagcccgtgttaagaacagccacagttcaaggaccgagcttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgatcaaggacactttaccatgttaggggtgcgagaccgcctggccattctgccacgccactcgcaaccaggaaaaactatttgggtggagcacaaattggtcaatgtgttagatgctgttgaattagtggatgagcagggtgtgaacttggaactcacactaataactttagacactaacgaaaaatttagggacgtcaccaagtttatcccagagacaatcaccggggcaagcgacgcaaccttgatcatcaacactgagcatatgccctcgatgttcgtcccagtgggtgatgttgtacaatatggatttctcaatctcagcggtaagcccacacaccgaaccatgatgtacaacttccctacaaaggcaggacagtgtgggggggtagtcacctcagtcggtaagatcattggagttcacatcggtgggaacggacgccagggtttctgcgctggactgaagagaagctactttgccagtgaacagggagagatccagtggatgaagcctaataaagagactgggagactgaacattaatggcccaacccgcaccaaattggagcccagtgtattccatgatgtgtttgagggcagtaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgatttcgagcgagctttgttttccaagtatgtgggaaacactctgcacgagcctgatgagtacgtgacacaggccgctctccactatgcaaaccagttgaagcaattggacatcaacactaataagatgagcatggaagaagcatgctatggcactgaatacctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaagagggacatactcgatccaatcactagagataccaccaaaatgaaattctacatggataaatatgggttggacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctaaatgactcagtctaccttaggatgacttttgggcacctttatgaggctttccatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccgggatcgctttttgcatttgattattcaggatatgatgcaagtctcagcccagtgtggtttagagctttagaggtggtcctccgtgagatcggctactcagaggaggctgtgtcactgatagaagggatcaatcacacccaccatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacctccatcttcaattccatgattaacaacataataatcagaactctcttgatcaaaacctttaaggggatcgatttggatgagttgaacatggtagcttacggagatgatgtgttggctagctatccattccctgttgactgctcggaattggccaaaactggtaaagagtatggattaacaatgacacctgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagattaccaatttccattccttatccaccccaccatgcccatgagggagatccatgagtccattcgttggactaaggatgcacgtaacacacaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtaagtacaattagatcagttcctattgggagagccttggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttgat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------a--------------------------------------
>JX068831.1_Human_coxsackievirus_A16_strain_BJ/11/11_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t--tcccc-t-----aagca-gtaacttagaagc------------tccacactatcac-gaccaa-tagcaggcgtggtgcaccaatcacgtctcgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggtcgaaagagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgtaccctcaatcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--taactgacagagctattgtt-----tacctg----tttgtt-ggatacgtccctc-----tcaatct--------------caaggccattcaa-actcttgattatatactacttctcaa--ctgcaaga-----aatggggtcacaggtctctactcagcgatccgggtcgcatgagaactcaaactctgcatcgg-aaggctcaactataaattacacaactataaactactacaaggatgcatatgctgcaagtgcagggcgccaggatatgtcccaagacccgaagaaattcaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagtgctgaggcatgtggctatagtgatcgtgtggcccagcttaccattgggaattctaccatcacgacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtgtcagtgaacagatttttcacgctagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttaacagaggtgggtgtgttcggtcaaaatgctcagttccactacctgtatcgatctggattttgcgtgcatgttcaatgcaatgcaagcaaattccaccaaggtgctttactggtggccgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccaccacacagcctggccaggttggtgcagtcctgacacacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgccctcaccagtggatcaacctgagaactaataattgtgcaaccattatagttccatacatgaacacagttccatttgattcagccctcaaccactgcaactttggtttgctggtcgtcccggtggtaccgttggacttcaacgcaggtgccacgtctgaaattcctattacagtcaccatagctcccatgtgtgcagaatttgcgggtctgcgccaagcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttaccaccgatgatggtgtctccgcaccaattttaccaggtttccatccaactccacctatacatataccaggagaagtacacaacttattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcaacgcttgtgctttccagtgtcggtgcagagta------aaacgggcgagttatgtgctgcctttagagctgatcctggaagagatggtccgtggcagtccacaatactgggccagctctgcaggtactacacccagtggtcgggttcactggaagtaacattcatgtttgcgggctcattcatggccacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctagggacgcatgtgatctgggacttcggattacaatcctctgtgacgttggttgtgccatggattagcaacacacactacagggcgcacgcccgtgctgggtactttgactattacaccaccggcattataactatatggtatcaaactaactatgtggtacctattggtgctcccactacagcatacattgtagctttggcagcagcccaggacaactttaccatgaaactatgcaaggacacggaggacattgagcaaacagctaatatacaaggggatccc--------attgcagacatgatcg---accaaaccgt--------------------------gaataaccaagtgaaccgctccttaactgcactgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtgccagcactacaagctgcggagacaggggcgtcgtcaaatgctagtgacaagaacctcattgagacaagatgtgtgttgaatcatcactccacacaggagacagccattgggaatttctttagtcgtgctggtttggttagcatcattacaatgcccaccacgggtacaca-gaacacagacggttacgtcaactgggacattgacttaatgggatatgctcaattacggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacatttgtcgtagccaagcccaatggtgagctagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacccacatccagagattcattcgcttggcaaactgccaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttaccccaccttcggggagcatctccaagcaaacgacctagattatggccaatgcccgaataacatgatgggcacttttagtattagaactgtagggaccgagaagtcaccacactccatcaccctgagggtatatatgaggattaaacacgtcagagcatggatcccaaggcctctgaggaatcaaccctatttgtttaagtccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------actggga------------------------------------------gagtttgggcagcagtcgggtgccatatatgtgggcaactatagggtagtaaatcggcatcttgccacacacaacgattgggcaaaccttgtgtgggaggacagttctagggacttattagtctcttctaccaccgcccaggggtgcgacactatcgctagatgtaattgtcaaactgggatatattattgcaattccagaaggaagcactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgaatattacccagctagataccaatcccacctcatgcttgctgtaggccattcagaacctggtgactgtggtggcatcctcaggtgccaacacggtgtggtaggaattgtctccactggaggaaatggccttgtggggttcgctgacgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtggaggcattgaagaatcatttaattggctcagaaggggctgttgagaagatcctgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgattatgacatggtcacccttacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggtattcccatagtacaaaaacagagcgcttcatggttaaagaagtttaatgacatggctaacgctgcaaagggacttgagtggatctctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctaaagagaaagttgaattcttgaacaacctgaaacagcttccc-ttactggagaaccaaatttcaaatcttgaacagtctgctgcctcgcaggaggatctagaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagttccagccactctacgcgaccgaagctaaaagagtctatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctccccaggaacaggcaagtcacttgctacgggcatcatagctagggccattgctgacaaatatcattctagcgtttactcactccctccagacccagatcattttgatggatataagcaacaagtagttactgttatggatgatctttgtcagaacccagatggaaaggatatgtcactattttgccagatggtttctacagtggatttcataccacccatggcgtccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagactcagatgcgattcgcagacgattctacatggactgcgacatagaggtgacagactcctacaagacggaccttggtcgacttgacgcaggtagggccgctaagctttgcacggagaacaacaccgccaattttaagagatgcagcccactagtgtgtggcaaagctattcaattaagagacagaaaatctaaagtgagatatagcattgacactgtggtgtcagaactaatcagggagtataataataggtctgccattggtaataccatagaagccctcttccaaggaccccccaagttcaagcctataagaatt---agccttgaagaaaaaccagccccagatgccatcagcgacctactagctagcgtggatagcgaggaggttcggcaatactgc-agggagcaggggtggataatcccagaaacaccggccaatgtggagcgtcacctcaacagagcggtgctagtgatgcagtccatcgccaccgtggttgcagttgtgtctctcgtctatgttatttacaaattgttcgccgggtttcagggtgcttattctggcgcgcctaagcaagctctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatcccttttaaggcgtaacgttagacaggtgcaaactgatcaaggacactttaccatgttaggagtacgagaccgcctggccattctgccacgccactcgcaaccaggaaaagctatttgggtggagcacaaattagttaatgtgttagatgctgttgaattggtggatgagcagggtgtgaacttggaactcacactaataactttagacactaatgaaaaatttagggacgtcaccaagtttatcccagagacaatcaccggggcaagcgacgcaaccttgatcatcaacactgagcatatgccctcgatgttcgtcccagtgggtgatgttgtacaatacggatttctgaatctcagcggcaagcccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtgggggggtggtcacctcagtcggtaagatcattggaattcacatcggtgggaacggacgccaaggtttctgcgctggactgaagagaagctactttgccagtgagcagggagagatccagtgggtgaagcctaataaagagactgggagactgaacattaatggtccaacccgtaccaaattggagcccagtgtatttcatgatgtgtttgagggcagtaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgatttcgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgatgagtacgtgaaacaggccgctctccactatgcaaaccagttaaagcaattggatatcaacactaataagatgagcatggaagaggcgtgctatggcactgaatacctggaggccatagatctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagggacatactcgatccaatcactagagataccaccaaaatgaaattctatatggataaatacgggttggacttgccctattccacctatgtgaaagatgagcttagatccttagacaagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctttatgaggcttttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttttggagcaaactaccgatcctgctgccgggatcgctttttgcatttgattattcaggatatgatgcaagtctcagcccagtgtggtttagagctttagaggtggtcctccgtgagatcggctactcagaggaggctgtatcactgatagaagggatcaatcacacccaccatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacctccatcttcaattccatgattaacaacataataatcagaactctcttgatcaaaacctttaaggggatcgatttggatgagttgaacatggtagcttacggagatgatgtgttggctagttatccattccctgtcgactgctcggaattggccaaaactggtaaagagtatggactaacaatgacacctgctgataaatcaccctgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagatcaccaatttccattccttatccaccccaccatgcccatgagggagatccatgagtccattcgttggacaaaggatgcacgtaacacacaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggagagccttggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagctc--------------------------aag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttgat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatacgca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC755232.1_Coxsackievirus_A16_isolate_NJ10-31_polyprotein_gene_complete_cds
--tacaaaaaagcaggctttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagtacactgattctgcgggatctttgtacgcct-g-ttttata-----accct-------cccc-t-----aagca-gtaacttagaagc------------ttcacgctatcac-gaccaa-tagtaggcgtggtgcaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-ttgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgtaccctcaatcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----tcaattt--------------caaggctattcaa-actcttgattatatactacttctcaa--ctgcaaga-----aatggggtcacaagtctccactcagcgatccggatcgcacgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactattacaaggatgcatatgctgcaagcgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgttatggatgttatgcatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgaccgtgtggcccagcttactattgggaattctaccatcacgacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtgtcagtgaacagatttttcacgctagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaagttccctgatgttttgacagaggtaggtgtgttcggacaaaatgctcagttccactacctgtatcgatctggattttgcgtgcatgtccagtgcaatgcaagcaaattccaccagggtgctttactggtggccgtgttgcctgaatatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccaccacacagcctggccaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgccctcaccagtggattaacctgagaaccaataattgtgcaaccattatagttccatacatgaacacagttccatttgattcagctctcaaccactgcaactttggtctgctggtcgtcccggtggtaccattggacttcaacacaggtgccacgtccgaaattcctattacaatcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaagcagtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactaccgatgatggtgtctccgcaccaattttaccaggtttccacccaactccacctatacacataccaggagaagtacataacttattggaaatatgcagagtggagactatcctggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcagtgcagagta------aaacgggtgagttatgtgctgcctttagagctgaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcaggtattacacccagtggtcgggttcattggaagtaacattcatgtttgcgggctcattcatggccacaggtaagatgctcattgcctacacccctcctgggggaaatgtgcctgcggacagaatcacagcaatgttagggacgcatgtgatctgggacttcggattacaatcttctgtgacgttggttgtgccgtggattagcaacacacactacagggcgcacgcccgtgctgggcactttgattattacaccactggcattataactatatggtatcaaactaactatgtggtacctattggtgctcccactacagcatacattgtagctttggcagcagcccaagacaactttaccatgaaactatgcaaggacacggaggacattgagcaaacagctgatatacaaggggatccc--------attgcagacatgatcg---atcaaactgt--------------------------gagtaaccaagtgaaccgctccttaactgcactgcaagtacta--------cctacagccgctaatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagctgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagacgagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggttagtatcatcacaatgcccaccacgggtacaca-gaatacagacggttatgttaactgggatattgacttgatgggatatgctcaattacggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacatttgtcgtagccaagcccaatggtgagctagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacccacatccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccctttcatgtcaccagccagtgcataccaatggttttacgatggttatcccaccttcggagagcatccccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagtgtcagaactgtagggactgagaagtcaccacactccattaccctgagggtatatatgaggattaaacacgtcagagcgtggatcccaaggcctctgagaaatcaaccctatttgtttaagactaacccaaactataaagggaa----cgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------actggga------------------------------------------aagtttgggcagcagtcaggtgccatatatgtaggcaactatagggtagtgaatcggcatcttgccacacacaacgactgggcaaaccttgtgtgggaggatagttctagggacttgttagtctcttctaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaactggaatatattattgcaactccaagaggaaacactacccggttagtttcaccaagcccagcctgatatatgtggaggctagtgaatattacccagctagataccaatcccacctcatgcttgccgtaggccattcagaacctggcgactgtggtggcatcctcaggtgccaacacggtgtggtaggaattgtctccactggtggaaatggtcttgtggggttcgctgacgtcagagatcttctatggctggatgaagaggcaatggaacaaggagtgtctgactacattaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtggaggcgttgaagaaccatttaattggctcagaaggggctgttgagaagatcctgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgattatgacatggtcaccctcacagccacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaggcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggctaacgctgcgaagggacttgagtggatctctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctaaagagaaagttgaattcttgaacaacctgaagcagcttccc-ttactggagaaccaaatttcaaatctcgaacagtctgctgcctcgcaggaggatctagaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagttccagccactctacgcgactgaagctaaaagagtttatgccctagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctccccaggaacaggcaagtcacttgctacgggcatcatagctagggccattgctgacaagtatcattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagttactgttatggatgacctttgtcaaaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggatttcataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaacgccagcaacatagtagttcctacagtttcggactcagatgcgattcgcagacgattctatatggactgcgatatagaggtaacagactcctacaaaacggaccttggccgacttgacgcaggtagggccgctaagctttgcacggagaacaacaccgccaattttaagagatgcagcccactagtgtgtggcaaagctattcaattaagagacaggaaatctaaagtgagatatagcattgatactgtggtgtcagaattaatcagagagtataataatagatctgccattggtaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agcctcgaagagaagccagccccagatgccatcagcgacctactagctagtgtggatagcgaggaggttcggcaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggagcgtcacctcaatagagcagtgctagtgatgcagtccatcgccaccgtggtcgcagttgtatctcttgtctatgttatttacaaattgttcgccgggtttcagggtgcttattctggcgcgcctaagcaagctctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgatcaaggacacttcaccatgttaggggtccgagatcgcctggccattctgccacgccactcgcaaccaggaaaaactatttgggtggagcacaaattagttaatgtgttggatgctgttgaattagtggatgagcagggtgtgaacttggaactcacactaataaccttagacactaatgaaaaatttagggacgtcaccaagtttatcccagagacaatcaccggggcaagtgacgcaaccttgatcatcaacactgagcatatgccctcgatgtttgtcccagtgggtgatgttgtgcaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggggtagtcacctcagtcggtaagatcattggaatccacatcggtgggaacggacgccagggtttctgcgctggactaaagagaagctactttgccagtgaacagggagagatccagtggatgaagcctaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagcgtattccatgatgtgtttgagggcattaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgaacctgatgagtacgtgacacaggctgctctccactatgcaaaccagttaaagcaattggacatcaacactaataagatgagcatggaagaagcatgctatggtactgaatacctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagggacatactcgatccaatcactagagacaccaccaagatgaaattctatatggataaatatgggttggacttgccttattccacctatgtgaaagatgagcttagatccttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttagaatgacttttgggcatctttatgagacttttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccgggatcgctttttgcatttgattattcaggatatgatgcaagtctcagcccagtgtggtttagggctttagaggtggtcctccgtgagatcggctactcagaggaggctgtgtcactaatagaagggatcaatcatacccatcatgtgtatcggaacaagacatattgtgttcttggtggaatgccctcaggctgttccggcacctccatcttcaattccatgattaataacataataatcagaactctcttgatcaaaacctttaaggggatcgatttggatgagttgaacatggtagcctacggagatgatgtgttggctagctatccattccctattgactgctcggagttggccaaaactggtaaagagtatggactaacaatgacacctgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagatcaccaattcccattccttatccaccccaccatgcccatgagggagatccatgagtccattcgttggaccaaggacgcacgtaatacacaggatcacgtgcgctccttatgccttctagcatggcacaatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagtcttggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagttc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaaaa----------------------------------
>JQ316639.1_Human_coxsackievirus_A16_isolate_HQ09011181_complete_sequence
---------------------------------------------------------------------------------------------------------------------a-----cccct-------cccc-t-----aagca-gtaacttagaagc------------ttcacactatcac-gaccaa-tagtaggcgtggtgcaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcctat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgtaccctcaatcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atcctt-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----tcaatct--------------caaggctattcaa-actcttgattatatactacttctcaa--ctgtaaga-----aatggggtcacaagtctccactcagcgatccggatcgcatgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactactacaaggatgcatatgctgcaagcgcagggcgccaggatatgtcccaaggtccgaagaaatttactgaccctgtcatggatgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcgtgtggctatagtgatcgtgtggcccagcttactattgggaattctaccatcacgacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtgtctgtaaacagatttttcacgctagacaccaaatcttgggccaagg------------------actcaaagggatggtattggaaattccctgacgttttgacagaggtaggtgtgttcggtcaaaacgctcagttccactacctgtatcgatctgggttttgcgtgcatgtccagtgcaatgcaagcaaattccaccagggtgctttactggtggctgtgctgcctgaatatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccaccacacagcctggccaggttggtgcagtcctgacacacccttacgtgctagatgcagggatccctttgagccaactaactgtgtgccctcaccagtggatcaacctgagaaccaataattgtgcaaccattatagtcccatacatgaacacagttccatttgactcagctctcaaccactgcaactttggtttgctggtcgtcccggtggtaccattggacttcaacgcaggtgccacgtccgaaatccctattacagttaccatagctcccatgtgtgcagaatttgcgggtctgcgccaagcagtaaagcaaggtataccaacagagcttaaacctggtaccaatcagtttcttactactgatgatggtgtctccgcaccgatcttaccaggtttccacccaactccacctatacacataccaggagaagtacataacttattggaaatatgcagagtggagaccattctggaggttaacaa----------cctgaagactaatgagaccaccccc------atgcaacgcttgtgctttccagtgtcagtgcagagta------aaacgggtgagttatgtgctgcctttagagctgaccctggaagagatggtccgtggcagtccacaatactgggccagctctgcaggtattacacccagtggtcgggctcattggaagtaacattcatgtttgcgggctcattcatggccacaggtaagatgctcattgcttacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctagggacgcatgtgatctgggacttcggattacaatcttctgtgacgttggttgtgccgtggattagcaacacacactacagggcgcacgcccgtgctgggtacttcgactattacactactggcattataactatatggtatcaaaccaactatgtagtacctattggtgctcccactacagcatacattgtagctttggcagcagcccaggacaactttaccatgaaattatgcaaggacacggaggacattgagcaaacagctaatatacaaggggatccc--------atcgcagacatgatcg---atcaaactgt--------------------------gaacaaccaagtgaaccgctccttaactgcactgcaagtatta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagctgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagacgagatgtgtgttgaaccatcactctacacaggagacagccattgggaatttctttagccgtgctggtttggttagtattatcacaatgcccaccacgggtacaca-gaacacagacggttatgttaactgggatattgacttgatgggatatgctcaattacggcgcaaatgcgagttgttcacgtatatgcgctttgatgctgaattcacatttgtcgtagccaagcccaatggtgagctagtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacgcacttccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggatccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttatcccacctttggagagcatctccaagcaaatgacctagattacggccaatgcccgaataatatgatgggcacttttagtatcagaactgtagggactgagaagtcaccacactccattaccctgagagtatatatgaggattaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccctatctgtttaaaaccaacccaaattataaagggaa----tgatatcaaatgcactagcactagtagagataagat---aacaac---------------------------------------actggga------------------------------------------aagtttgggcagcagcctggtgccatatatgtaggtaactatagggtagtgaatcggcacctcgccacacgtaacgactgggcaaaccttgtgtgggaggatagttctagggacttgttagtctcttctaccaccgcccaggggtgcgacactatcgctaggtgcaattgtcaagctggaatatattattgcaactccaagaggaaacactatccggttagtttcaccaagcccagcctgatatatgtggaggctagtgaatattacccagctagataccaatcccacctcatgcttgctgtaggccattcagaacctggtgactgtggtggcatcctcaggtgccagcacggtgtggtagggattgtctccactggtggaaatggtcttgtggggttcgctgacgtcagagatcttctatggctggatgaagaggcaatggaacaaggagtatctgactacattaaa-ggcctcggtgacgcttttggtatgggtttcactgatgcagtgtccagggaagtggaggcattgaagaaccatttaattggctcagaaggggctgttgagaagatcctgaagaacttagtgaagctaatttcagctttagtcatagtcgttaggagtgattatgacatggtcaccctcacagccacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcgtggctaaagaagtttaatgacatggctaacgctgcgaagggacttgagtggatctctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctaaagagaaagttgaattcttgaacaacctgaagcagcttccc-ttactggagaaccaaatttcaaatctcgaacagtctgctgcctcgcaggaggatctagaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagttccagccactctacgcgactgaagctaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctctccaggaacaggcaagtcacttgctacgggcatcatagctagggccattgctgacaagtatcattctagcgtttactcactccccccagacccagatcattttgatggatataagcaacaagtagttactgttatggatgacctttgtcaaaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaacgccagcaacatagtagttcctacagtttcggactcagatgcgattcgcagacgattctatatggactgcgatatagaggtaacagactcctacaaaacggaccttggtcgacttgacgcaggtagggccgctaagctttgcacggaaaacaacaccgccaattttaagagatgcagcccactggtgtgtggcaaagctattcaattaagagacaggaaatctaaagtgagatatagcattgatactgtggtgtcagaactaatcagagagtataataatagatctgccattggtaacactatagaagccctcttccaaggaccccctaagtttaagcctattagaatt---agcctcgaagagaagccagccccagatgccatcagcgacttactagctagtgtagatagcgaggaggttcgacaatactgc-agggaacaggggtggatcattccagaaacaccggccaatgtggagcgtcacctcaatagagcagtgctagtgatgcagtccatcgccaccgtggtcgcagttgtatctcttgtctatgttatttacaaattgttcgccgggttcaaggttgcttattctggtgcgcctaagcaagctctcaaaaagcccgtgctaagaacagccacagttcaaggacggagcttagactttgccttatcccttttaaggggtaacattagacaggtgcaaactgatcaaggacactttaccatgttaggggtacgagaccgcctggccattctgccacgccactcgcaaccaggaaaaactatttgggtggagcacaaattagttaatgcgttggatgctgttgaattagtggatgagcagggtgtgaacttggaactcacgctaataaccttggataccaacgaaaaatttagggacgtcaccaagttcatcccagagacaatcaccggggcaagtgacgcaaccttggtcatcaacactgagcatatgccctcgatgttcgtcccagtgggtgatgttgtacaatatggatttctgaatctcagcggtagacccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggggtagtcacctcagtcggtaagatcattggaatccacatcggtgggaacggacgccagggtttctgcgctggactaaagagaagctactttgccagtgaacagggagagatccagtggatgaagcttaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcattaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgaacctgatgagtacgtgacacaggctgctctccactatgcaaaccagttaaagcaattggacattaacaccaataagatgagcatggaagaagcatgctatggcactgaatacctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagggacatactcgatccaatcactagagacaccaccaagatgaaattctacatggataaatatgggttggacttgccctattccacctatgtgaaggatgagctcagatccttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttagaatgacttttgggcatctttatgagacttttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgttgccgggatcgctttttgcatttgattattcaggatatgatgcaagtctcagcccagtgtggtttagagctttagagttggtcctccgtgagatcggctactcggaggaggctgtgtcactaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacctccatcttcaattccatgattaataacataataatcagaactctcttgatcaaaacctttaaggggatcgatttggatgagttgaacatggtagcctacggagatgatgtgttggctagctatccattccctattgactgctcggagttggccaaaactggtaaagagtatggactaacgatgacacctgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagatcaccaattcccattccttatccaccccaccatgcccatgagggagatccatgagtccattcgttggaccaaggacgcacgtaatacacaggatcacgtgcgctccttgtgccttttagcatggcacaatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagctc-------------------------agag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-gatagca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF193631.1_Coxsackievirus_A16_isolate_BJ10-02_complete_genome
---------------------aaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcgcactgatcctgcgggacctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gtaacttagaagc------------tttacactatcat-gaccaa-tagtaggcgtggcgcaccagtcacgtctcgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccgactaactacttcgagaaacc-tagtagcatcgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------gggataa-cccatgggacgctctaaaacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgtaccctcactcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcct-tattggctgcttatggcgacaattgaa-------aggttgttaccatatagctattggattggccatccgg--taactaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----tcaatct--------------caaggccattcaa-actcttgattatatattacttctcaa--ctgtaaga-----aatggggtcacaagtctctactcagcgatccgggtcgcatgagaactcaaactctgcatcgg-aaggctcaaccataaattatacaactataaattactacaaggatgcatatgctgcaagccgcaggcgccaggacatgtcccaagacccgaagaaatttaccgatcctgtcatggacgttatacatgagatggctccaccgcttaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggctcagcttactattgggaattctaccatcacgacgcaagaagcagctaacatagttatagcctatggggagtggctcgaatattgcccagacacggatgcaacagcagtcgataagcccacacgacctgacgtgtcagtgaatagatttttcacgctagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaggtaggtgtgtttggtcaaaatgctcagttccactacctatatcgatctgggttttgcgtgcatgtccagtgcaatgcaagtaaattccaccagggtgctttactggtggccgtgctgcctgagtatgtgctcggcactattgcaggagggaccgggaatg------agaattctcatcctccctacgccactacacagcctggccaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgcccccaccagtggatcaacctgagaaccaataattgtgcaactattatagttccatatatgaacacagttccatttgattcagctcttaaccactgcaattttggtttgctagtcatcccggtggtgccattggacttcaacacaggtgccacgtccgaaattcctattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactactgatgatggtgtttccgcaccaattttaccaggtttccacccaactccacctatacacataccaggagaagtacacaacttattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcagtgcagagta------aaacgggcgagttatgtgctgcctttagagcagaccctggaagggatggtccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcgggttcattggaagtaacattcatgtttgcgggctcattcatggccacaggcaagatgctcatcgcctacaccccacctgggggaaatgtacctgcggacagaatcacagcaatgctagggacgcatgtgatctgggacttcgggttacaatcttctgtgacgttggttgtgccatggattagcaacacacactacagggcgcatgcccgtgctgggtactttgactattacaccaccggcattataactatatggtatcaaactaactatgtggtacctattggtgctcccactacagcatacattgtggctttggcagcagcccaggacaactttaccatgaaactatgtaaggacacggaggacattgaacaaacagctaatatacaaggggatccc--------atcgcagacatgatcg---accaaaccgt--------------------------gaatagccaagtgaaccgctccttaactgcactgcaggtacta--------cctacagctgccaacactgaagcaagtagccataggttaggcactggtgttgtaccagcactacaagctgcggaaacaggggcgtcatcaaatgctagtgataagaatctcattgagacaagatgcgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggttagcatcatcacaatgcccaccacgggtacaca-gaatacagacggttacgttaactgggacattgacttgatgggatatgctcaattacggcgcaaatgcgagttgttcacatatatgcgctttgatgcagaattcacatttgtcgtagccaaacccaatggtgagctggtcccccaattactgcagtacatgtacgtcccaccaggggctccgaaacccacatccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacagacccgccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttatcccacatttggggagcatctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattagaactgtagggaccgagaagtcgccacactccattaccctgagggtgtatatgaggattaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccctatttatttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcaacagtcaggcgccatatatgtaggcaactatagggtagtgaatcggcatcttgccacacacaacgactgggcaaaccttgtatgggaagacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgatactatcgctagatgcaattgtcaaaccggaatatattattgcagctctagaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattacccagctagatatcaatcccacctcatgcttgctgtaggccattcagaacctggtgactgtggtggcatcctcaggtgtcaacacggtgtggtaggaattgtctccactggtggaaatggtcttgtggggttcgctgacgtcagagatcttctatggctggatgaagaagcaatggaacagggagtatctgactatatcaaa-ggccttggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtagaggcattgaagaatcatttaattggctcagagggagctgttgaaaagattctgaagaacttggtgaagctagtttcagctttagtcatagtcgttaggagtgattatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggccaacgctgcaaagggacttgagtggatttctagtaaaatcagtaagttcattgattggcttaaggaaaagattattccagccgctaaagagaaagttgaattcttgaacaatctgaagcagcttccc-ttactggagaaccaaatttcaaatcttgaacagtctgctgcctcgcaaggggacttggaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagtttcagccactctacgcgaccgaagctaaaagagtctatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctgatcatcagaggctccccaggaacaggcaagtcacttgctacgggcatcatagctagggccatcgctgacaaatatcactctagcgtttactcactccctccagacccagatcattttgatggatacaagcagcaagtagttactgttatggatgatctttgtcaaaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaagggagtatctttcacctctaagtttgttgtcgcatcgaccaatgctagcaacatagtagttcctacagtttcagactcagatgcgattcgcagacgattctacatggactgcgatatagaggtaacagactcctacaagacggatcttggccgacttgacgcaggtagggccgctaagctttgcacggagaacaacaccgccaattttaagagatgcagcccactagtgtgcggcaaagctattcaattaagagacaggaaatctaaagtgagatatagcattgatactgtggtgtcagaattaattagggagtataatagtaggtctgccattggtaacactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agtcttgaagagaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcggcaatactgc-agggaacagggatggataattccagaaacaccggccaatgtggagcgtcaccttaacagagcagtgctagtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgtttgctgggttccagggtgcatattctggcgcgcctaagcaaactctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgaccaaggacacttcaccatgttaggggcgcgagaccgcctggccattcttccacgccactcgcaaccaggaaaaactatttgggtggagcacaaattaattaatgtgttagatgctgttgaattagtagatgagcagggtgtgaacttggaactcacactaataactttagacaccaatgaaaagtttagggacgtcaccaagtttattccagagacaatcaccggggcaagtgacgcaaccttgatcatcaacactgagcatatgccctcaatgttcgtcccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggggtagtcacctcagtcggtaagatcattggaatccacatcggtgggaacggacgccagggtttttgcgctggactgaaaagaagctattttgccagtgaacagggagagatccagtggatgaagcctaataaagagactgggagactgaacattaacggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcagtaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtacgtgggaaacaccctgcacgaacctgatgagtacgtgacacaggccgctctccactatgcaaaccagttaaagcaattagacatcaacactggtaagatgagcatggaagaagcatgctatggcactgaacacctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagggacatactcgatccaatcactagagataccaccaaaatgaaattctacatggataaatatgggttggacttgccctactccacctatgtgaaagatgagcttagacctttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcgtctctatgagactttccatgccaacccggggactgtgaccggatctgcagtagggtgcgatcctgatgtgttctggagcaaactgccgatcctactgccgggatcgctttttgcatttgattattcagggtatgacgcaagtctcagtccagtgtggtttagggctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtcactaatagaagggatcaaccacacccatcatgtgtatcggaacaagacatattgtgtccttggtgggatgccctcaggctgttccggcacttccatcttcaattccatgattaataacataataatcagaactctcttgatcaaaacctttaagggaatcgatttggatgagttgaacatggtggcttacggagatgatgtgttggctagctatccattccctgttgactgctcggagttggccaagactggtaaagagtatggactaacaatgacacctgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagatcaccaatttccattccttatccaccctaccatgcccatgagggagatccatgagtccattcgttggactaaggatgcacgtaatactcaggatcacgtgcgctccttgtgtcttttggcatggcataatgggaaggaggagtatgaaaagtttgtgagtacaattagatcagttcctattgggaaagccctggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atgtacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actgg------tgtgggggtaaatttgt-ta-taaca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC755234.1_Coxsackievirus_A16_isolate_XZ10-C-1_polyprotein_gene_complete_cds
--tacaaaaaagcaggctttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgatcctgcgggatctttgtgcgcct-g-ttttaca-----accct---t---cccc-t-----aagca-gtaacttagaagc------------ttcacactatcat-gaccaa-tagtaggcgtggtgcaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcatcgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaaaacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgtaccctcactcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attctt-tattggctgcttatggtgacaattgaa-------aggttgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----tcaatct--------------caaggccattcaa-actcttgattatatattacttctcaa--ctgtaaga-----aatggggtcacaagtctctacccagcgatccgggtcgcatgagaactcaaactctgcatcgg-aaggctcaaccataaattatacaactataaactactacaaggatgcatatgctgcaagcgcagggcgccaggacatgtcccaagacccgaagaaatttaccgatcctgtcatggacgttatgcatgagatggctccaccgcttaagtctccaagcgctgaggcatgtggttatagtgatcgcgtggctcagctcactattgggaattctaccatcacgacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgataagcccacacgacctgacgtgtcagtgaatagatttttcacgctagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaggtaggtgtgtttggtcaaaatgctcagttccactacctatatcgatctgggttttgcgtgcatgtccagtgcaatgcaagtaaattccaccagggtgctttactggtggccgtgctacctgagtatgtgctcggcactattgcaggagggaccgggaatg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgcccccaccagtggatcaacctgagaaccaataattgtgcaactattatagttccatacatgaacacagttccatttgattcagctcttaaccactgcaattttggtttgctagttatcccggtggtaccattggacttcaacacaggtgccacgtccgaaattcctattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcaataaagcaaggcataccaacagagctcaaacctggcaccaatcagtttcttactaccgatgatggtgtctccgcaccaattttaccaggtttccacccaactccacctatacacataccaggagaagtacacaacttattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagta------aaacgggcgagttatgtgctgcctttagagcagaccctggaagggatggtccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcgggttcattggaagtaacattcatgttcgcgggctcattcatggccacaggcaagatgctcatcgcctacaccccacctgggggaaatgtacctgcggacagaatcacagcaatgctagggacgcatgtgatctgggacttcgggttacaatcttctgtgacgttggttgtgccatggattagcaacacacactacagggcgcacgcccgcgctgggtactttgactattacaccactggcattataactatatggtatcaaactaactatgtggtgcctattggtgctcccactacggcatacattgtggctttggcagcagcccaggacaactttaccatgaaactatgcaaggacacggaggacattgaacaaacagccaatatacaaggggatccc--------attgcagacatgatcg---accaaaccgt--------------------------gaatagccaagtgaaccgctccttaactgcactgcaagtacta--------cctacagctgccaacactgaagcaagtagccacaggttaggcactggtgttgtaccagcactacaagctgcggaaacaggggcgtcatcaaatgctagtgataagaatctcattgagacaagatgcgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggttagcatcatcacaatgcccaccacgggcactca-gaacacagacggttacgtcaactgggacattgacttgatgggatatgctcaattacggcgcaaatgcgagttgttcacatatatgcgctttgatgcagaattcacatttgtcgtagccaaacccaatggtgagctggtcccccaattactgcagtacatgtacgtcccaccaggggctccgaaacccacatccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacagacccgccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttatcccacatttggggagcatctccaagcgaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattagaactgtagggaccgagaagtcgccacactccattaccctgagggtgtatatgaggattaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcaacagtcaggtgccatatatgtaggcaactatagggtagtgaatcggcatcttgccacacacaacgactgggcaaaccttgtatgggaagacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggaatatattattgcagctctagaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattacccagctagataccaatcccacctcatgcttgctgtaggccattcagaacctggtgactgtggtggcatcctcaggtgtcaacacggtgtggtaggaattgtctccactggtggaaatggtcttgtggggttcgctgacgtcagagatcttctatggctggatgaagaagcaatggaacagggagtatctgactatatcaaa-ggccttggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtagaggcattgaagaatcatttaattggctcggagggagctgttgaaaagattctgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgattatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagtaagttcattgattggcttaaggaaaagattattccagccgctaaagagaaagttgaattcttgaacaatctgaagcagcttccc-ttactggagaaccaaatttcaaatcttgaacagtctgctgcctcgcaagaggacttggaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagtttcagccactctacgcgatcgaagctaaaagagtctatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcatcagaggctccccaggaacaggtaagtcacttgctacgggcatcatagctagggccatcgctgacaaatatcactctagcgtttactcactccctccagacccagatcattttgatggatacaagcagcaagtagttactgttatggatgatctttgtcaaaacccagatggaaaagacatgtcactattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaagggagtatctttcacctctaagtttgttgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagactcagatgcgattcgcagacgattctacatggactgcgatatagaggtaacagactcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctttgcacggagaacaacaccgccaattttaagagatgcagcccactagtgtgcggcaaagctattcaattaagagacaggaaatctaaagtgaggtatagcattgatactgtggtgtcagaattaattagggagtataataataggtctgccattggtaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agtcttgaagagaagccagccccagatgccatcagtgacctacttgctagtgtggatagcgaggaggttcggcaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggagcgtcaccttaacagagcagtgctagtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgctgggttccagggtgcatattctggcgcgcctaagcaaactctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgaccaaggacacttcactatgttaggggtgcgagaccgcctggccattcttccacgccactcgcaaccaggaaaaactatttgggtggagcacaaattaattaatgtgttagatgctgttgaattagtagatgaacagggtgtgaacttggaactcacactaataactttagacaccaatgaaaagtttagggacgtcaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttggtcatcaacactgagcatatgccctcaatgtttgtcccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggggtagtcacctcagtcggtaagatcattggaatccacatcggtgggaatggacgccagggtttctgcgctggactgaagagaagctattttgccagtgaacagggagagatccagtggatgaagcctaataaagagactgggagactgaacattaacggcccaacccgtaccaagttggagcccagtgtattccatgatgtgtttgagggcagtaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgaacctgatgagtacgtgacacaggccgctctccactatgcaaaccagttaaagcaattagacatcaacactggtaagatgagcatggaagaagcatgctatggcactgaacacctggaggccatagacttgcacaccagtgccgggtacccctatagtgccttgggtgttaagaaaagagacatactcgatccaatcactagagataccaccaaaatgaaattctacatggataaatatggattggacttgccctactccacctatgtgaaagatgagcttagatctttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacttttcatgccaacccggggactgtgaccggatctgcagtagggtgcgatcctgatgtgttctggagcaaactgccgatcctactgccgggatcgctttttgcatttgattattcagggtatgacgcaagtctcagtccagtgtggtttagagctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtcactaatagaagggatcaaccacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgattaataacataataatcagaactctcttgatcaaaacctttaagggaatcgatttggatgagttgaacatggtggcttacggagatgatgtgttggctagctatccattccctgttgactgttcggagttggccaagactggtaaagagtatggactaacaatgacacctgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagatcaccaatttccattccttatccaccctaccatgcccatgagggagatccatgagtccattcgttggaccaaggatgcacgtaatactcaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagctctggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atgtacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaa-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289412.1_Coxsackievirus_A16_isolate_CV-A16/P1014/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t--ccccc-t-----aagca-gtaacttagaagc------------tccacactatcac-gaccaa-tagcaggcgtggtgcaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggtgaccgtgacagtggctgcgttggcggcctgcccat--------ggggcaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgtggagcgcgtaccctcaatcca-gaggg-cagcgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattaaa-------gagttgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tacttg----tttgtt-ggatacgtccctc-----tcaatct--------------caagaccattcaa-actcttgattatatactacttctcaa--ttgtaaga-----aatggggtcacaagtctccactcagcgatccggatcgcatgagaactcaaactccgcatcgg-aaggctcaaccataaattacacaactataaactactataaggatgcatatgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaattcaccgaccctgtcatggatgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggctatagtgaccgtgtggcccagcttactattggaaattctaccatcacgacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacagcagtcgacaagcccacacgacctgacgtgtcagtgaatagatttttcacgctagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaagttccctgatgtcttaacagaggtgggcgtattcggtcagaatgctcagttccactacctgtatcgatctggattttgcgtgcatgttcagtgcaacgcaagcaaattccatcagggcgctttgctggtggccgtactgcctgagtatgtgctcggtactatcgcaggagggaccggaaacg------agaattctcatcctccctacgccaccacacagcctggccaggttggtgcagtcctaacacacccttacgtgctagatgcagggatccctttgagtcaattaactgtgtgccctcaccagtggatcaacctgagaaccaataattgtgcaaccattatagttccatacatgaacacagttccatttgattcagctctcaaccactgcaactttggtttgctggtcgtcccggtggtaccattggacttcaacgcaggtgccacatctgaaattcctattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaagcagtaaagcaaggcataccaacagaactcaaacctggtaccaatcagtttcttactaccgatgatggtgtttccgcaccaatcttaccaggtttccatccaactccacccatacacataccaggagaagtgcacaacttactggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcaacgcttgtgctttccagtgtcggtgcagagca------agacgggtgagttatgtgctgcctttagagctgatcctggaagagatggtccgtggcaatccacaatactgggccagctctgcaggtactacacccagtggtcgggttcactggaagtaacattcatgtttgcaggctcattcatggccacaggtaaaatgctcatcgcctacaccccacctggaggaaatgtgcctgcagacagaatcacagcaatgctagggacacatgtgatctgggacttcggattacaatcctctgtgacgttagttgtgccatggattagcaacacacactacagggcgcacgcccgtgctgggtattttgactattacaccaccggtattataactatatggtatcaaactaactatgtggtacctattggtgctcccactacagcatacattgtagcattggcagcagcccaggacaactttaccatgaaactatgcaaggacacggaggacattgagcaaacagctaatatacaaggggatccc--------attgcagacatgatcg---accagaccgt--------------------------gaataaccaagtgaaccgctccctaactgcactgcaagtgcta--------cctacagctgccaatactgaagcgagtagtcacagattgggcactggtgtcgtgccagcactacaagctgcggagacaggcgcgtcgtcaaatgctagtgacaagaatctcattgagacaaggtgtgtgttgaatcatcactccactcaggagacagccattgggaatttctttagccgtgctggtttggttagcattattacaatgcccaccacgggtacaca-gaacacagacggttacgtcaactgggacatcgacttaatgggatatgctcaattacggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaactgctgcagtacatgtatgtcccaccaggggctccgaaacccacatccagagattcattcgcttggcaaactgctactaacccgtctgtgtttgtgaagatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttaccccaccttcggggagcatctccaagcaaatgacctagattatggccaatgcccgaataacatgatgggcacttttagtattagaactgtagggaccgagaagtcaccacactccattaccctgagggtatatatgaggattaaacacgtcagagcatggatcccaaggcctctgaggaatcaaccttatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcactagcactagtagagacaaaat---aacaac---------------------------------------actggga------------------------------------------aagtttggacagcagtcaggtgccatatatgtgggcaactataggatagtgaatcggcatcttgccacacataacgattgggcaaaccttgtgtgggaggacagttctagggacttgttagtctcttccaccaccgcccaggggtgtgacactatcgcaagatgcgattgtcaaaccggaatatattattgcaactccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattacccgtctagataccaatctcacctcatgcttgctgtaggccattcagaacctggtgactgtggtggcatcctcaggtgccaacacggtgtggtaggaattgtctccactgggggaaatggccttgtggggttcgctgacgtcagagatcttctgtggctggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcaccgatgcagtgtccagggaagtggaggcattgaagaatcatttaattggctcagaaggggctgtcgaaaagatcctgaagaacttggtgaagctaatttcagctctagtcatagtcgttaggagcgattatgacatggtcaccctcacagccacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaggacagcctctattcttggtattcccatagtgcaaaaacagagtgcttcatggttaaagaagtttaatgacatggctaacgctgcaaagggacttgagtggatctctagtaaaattagcaagttcattgattggctcaaggaaaagattattccagccgctaaagagaaagttgaattcttgaacaacctaaagcagctcccc-ttactagagaatcaaatttcaaatcttgaacagtctgctgcctcgcaggaagatctagaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagttccagccactctatgcgaccgaagctaaaagagtctatgccctagagaaaaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacccgtatgtctgatcatcagaggctccccaggaacaggcaagtcacttgctacgggcatcatagctagggccattgctgacaaatatcattctagcgtttactcactccctccagacccagatcattttgatgggtacaagcaacaagtagttactgttatggacgatctttgtcagaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggatttcataccacccatggcatccctggaagagaaaggagtgtcttttacctctaagtttgtcgttgcatcgaccaacgctagcaacatagtggttcctacagtttcagactcagatgcaattcgcagacgattctacatggactgcgacatagaggtgacagactcctacaagacagaccttggtcgacttgacgcaggtagggccgctaagctttgcacggagaacaacaccgccaactttaagagatgcagcccactagtgtgtggcaaagccattcaactaagagacagaaaatctaaagtgagatatagcattgacactgtggtgtcagagctaatcagagagtataataataggtctgccattggtaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaggaaaaaccagccccagatgccatcagcgacctactagctagtgtggatagcgaggaggttcggcaatactgt-agggaacaggggtggataattccagagacaccggccaatgtggagcgtcacctcaacagagcggtgctagtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgccgggttccagggtgcctattctggcgcgcctaagcaagctctcaaaaaacccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgatcaaggacactttaccatgctaggggtacgagaccgcctagccattttgccacgccactcgcaaccaggaaaaactatctgggtggagcacaaattagttaatgtgttggatgctgttgaattagtggatgagcagggtgtgaacttagaactcacactaataactttagacactaacgaaaaatttagggacgtcaccaagtttatcccagagacaatcaccggggcaagtgacgcaaccttgatcatcaacactgagcatatgccctctatgtttgtcccagtgggtgatgttgtacaatatggatttctgaacctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtgggggggtagtcacctcagtcggtaagatcattggaatccacatcggtgggaatggacgccagggtttctgtgctgggctgaagagaagctactttgccagtgaacagggagagatccaatggatgaagcctaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtattttatgatgtgtttgagggcagtaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgatttcgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgatgagtatgtgacacaagccgctctccactatgcaacccagttaaagcaattgggcatcaacactaataagatgagtatggaagaagcatgctatggcaccgaatacctggaggctatagatctgcacactagtgctgggtacccttatagtgctttgggtgttaagaaaagggacatactcgatccaatcactagagacaccaccaaaatgaagttctacatggataaatatgggttggacttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctttatgaggcttttcatgccaacccggggactgtgaccggatctgcggtgggatgcaatcctgatgtgttctggagcaagctaccgatcctgctgccgggatcgctttttgcatttgattattcaggatatgatgcaagtctcagcccagtgtggtttaaagctttagaggtggtcctccgtgagatcggctactcagaggaggctgtgtcactgatagaagggatcaatcacacccaccatgtgtatcggaataagacatattgtgtccttggtggaatgccctcaggctgttccggcacctccatcttcaattccatgattaacaacataataatcagaactctcttgatcaagacctttaaggggattgatttggatgagttgaatatggtagcttatggagatgatgtgttggctagctatccattccctattgactgctcggaattagccaaaactggtaaagagtatggactaacaatgacacctgctgacaaatcaccctgctttaacgaagtcacctgggagaatgctacattcttaaagagaggctttctgccagatcaccaatttccattccttatccaccccaccatgcccatgagggagatccatgagtccattcgttggaccaaggatgcacgtaacacacaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctgttggaagagccttggctataccaaattttgagaacctgagaagaaattggctcgaattatttt--a--atatacagctt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgtcgat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX068829.1_Human_coxsackievirus_A16_strain_TS10/08_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---cccc-c-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccaa-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtaccaatagactgc-tcacgcggttgaaagggaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaatcca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attctt-tattggctgcttatggtgacaattgaa-------aagttgttgccatatagctattggattggccatccgg--tgtctaacagagccattgtt-----taccta----tttatt-ggatacgtccctc-----ttcatct--------------caaggccattcaa-actcttgattatatactgctccttaa--ctgtagga-----aatggggtcacaagtttccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggctccaccgctaaaatctccaagcgccgaggcatgtggttacagtgatcgtgtggcccagcttaccattgggaattctaccatcacgacgcaagaagcagccaatatagtcatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagttgataagcccacacgacctgacgtgtcagtgaacagatttttcacgttagacaccaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaggtgggtgtgtttggtcaaaatgctcagttccactacctgtatcgatctggattctgcgtgcatgtccagtgcaatgcaagtaaattccaccagggtgctttgctggtggccgtgctgcctgagtatgtgctaggcactatcgcaggagggaccggaaacg------agaactctcatcctccctatgccactacacagcctggccagattggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgtcctcaccagtggatcaacctgagaaccaataattgtgcaaccattatagttccatatatgaacacagttccatttgattcagcccttaaccactgcaattttggtttgctggtcatcccggtggtaccgttggacttcaacacaggtgccacgtctgagattcctattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacggagctcaaacctggtaccaaccagtttcttaccaccgatgatggtgtttccgcaccaattttaccaggtttccacccaactccacctatacacataccaggagaagtacacaacttactggaaatatgcagagtggagaccatcttggaagttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagta------aaacgggcgagttatgtgctgcttttagagcagaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcaggtattacacccagtggtcgggttcattggaagtaacattcatgtttgcgggctcatttatggccacaggcaagatgctcatcgcctacactccacctggaggaaatgtgcctgcggacagaatcacagcaatgctagggacgcatgtgatctgggacttcggattacaatcttctgtgacgttggttgtgccatggattagcaacacacactacagggcgcacgcccgtgctgggtactttgattattacaccaccggcattataactatatggtatcaaactaactatgtagtacctattggtgctcccactacagcatacattgtagctttggcagcagcccaggacaactttaccatgaaactatgcaaggacacggaggacattgagcaaacagctaatatacaaggggatccc--------attgcagacatgatcg---accaaaccgt--------------------------gaataaccaagtgaaccgctccttaactgcactgcaagtacta--------cctacagctgccaatactgaagcgagtagtcacagactaggcactggtgttgtaccagcgctacaagctgcggagacaggggcttcgtcaaatgctagtgacaagaatctcattgagacgagatgtgtgttgaaccatcactccacgcaggagacagccattgggaatttctttagccgtgctggtttggttagcatcatcacaatgcccaccacgggcacaca-gaacacagacggttacgttaactgggacattgatttgatgggatatgctcaattacggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacatttgttgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgttccaccaggggccccgaaacccacgtccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcgccagccagtgcatatcaatggttttacgatggttatcccaccttcggggagcacctccaagcaaatgacctagattatggccagtgcccgaataatatgatgggcacttttagcattagaactgtagggactgagaagtcgccacactccattaccctgagggtatacatgaggattaaacacgtcagagcatggatcccaagacctctgagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagcagagacaagat---aacaac---------------------------------------attggga------------------------------------------gagtttgggcagcagtcaggcgccatatatgtaggcaattatagggtagtgaatcggcatcttgctacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtttcttccaccaccgctcaggggtgcgacactatcgctagatgcaattgtcaaaccggaatatattactgcagctccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattatccagctagataccaatcccacctcatgcttgctgtaggccattcggaacctggtgactgtggtggtatcctcaggtgccaacacggtgtggtagggattgtctccactggtgggaatggtcttgtgggattcgctgacgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggcgatgcctttggtatgggttttactgatgcagtgtctagggaagtggaggctttgaagaaccatttaattggctcagaaggggctgttgaaaagatcctaaagaacttggtgaagctaatttcagctttggtcatagtcgttaggagtgattatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggccaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctaaagagaaagttgaattcttgaacaacctgaagcagcttccc-ctgctggagaaccaaatttcaaatcttgaacagtctgctgcctcacaagaggatttagaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagtttcagccactctacgcgactgaagctaaaagagtctatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctctccaggaacaggcaagtcacttgctacgggcatcatagctagagccattgctgacaaatatcattctagcgtttactcactccctccagacccagatcattttgatggatacaagcagcaagtagttactgttatggatgatctttgtcaaaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggactttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcattgcatcgaccaatgctagcaacatagtagttcctacagtttcagactcagatgcgattcgcagacgattctatatggactgcgatatagaggtgacagactcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctttgtacggagaacaacaccgccaatttcaagagatgcagtccactagtgtgtggcaaagctattcaattaagagacaggaaatctaaagtgagatatagcattgatactgtggtgtcagaactaatcagggagtataataatagatctgccattggtaatactatagaagccctctttcaaggacctcctaagttcaagcctataagaatt---agccttgaagagaagccagccccaggtgccatcagtgatctacttgctagtgtggatagcgaggaggttcggcaatactgt-agggaacaggggtggataattccagaaacaccggccaacgtggagcgccacctcaacagagcagtgctagtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgctgggtttcagggtgcttattctggcgcgcctaagcaagttctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatcccttttaaggcgtaacattagacaggtgcaaactgatcaaggacacttcaccatgttaggggtacgagaccgcctggccatcctgccacgccactcgcaaccaggaaaaactatttgggtggagcacaaattaattaatgtgttagatgccgttgagttagtggatgagcaaggtgtgaacttggaactcacactaataaccttagacaccaacgaaaagtttagggacgtcaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttggtcatcaacactgagcatatgccctcaatgttcgtcccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaacttccctacaaaggcaggacagtgtggaggggtagtcacctcagttggtaagatcattggaatccacatcggtgggaacggacgccagggtttctgtgctggactgaagagaggctactttgccagtgaacagggagagatccagtggatgaagcctaataaagagactgggagactgaacatcaatggcccaacccgtaccaaattggagcccagtgtattccacgatgtgtttgagggcagtaaagaaccagcagttttaaccggtaaggaccccaggctcgaggttgattttgagcaagctttgttttccaagtatatcggaaacaccctgcacgagcctgatgagtacgtgacacaggctgctctccactatgcaaaccagttgaagcaattagacatcaacactaataagatgagcatggaagaagcatgctatggcactgaatacctggaggccatagacctgcacactagtgctgggtacccctatagtgccttgggtattaagaaaagggacatactcgatccaatcactagagataccaccaaaatgaaattttatatggataaatatgggttggacctgccatattccacctatgtgaaggatgagcttagatccttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctttatgagacttttcatgctaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccggggtcgctttttgcatttgattattcagggtatgatgcaagtctcagcccggtgtggtttagagctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtcactaatagaagggatcaaccacacccatcatgtgtatcgaaacaagacatattgtgtccttggcggaatgccctcaggctgctccggcacctccatcttcaattccatgattaataacataataatcagaactctcttgatcaaaacttttaaggggatcgatttggatgagttaaacatggtagcttacggagatgatgtgttggctagctacccattccctattgactgctcagagttggccaagactggtaaagagtatgggctaacaatgacacctgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccggattaccaatttccattccttatccaccccaccatgcccatgagggagattcatgagtccatccgttggactaaggatgcacgtaacactcaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaattttgagaacttgagaagaaattggctcgacttattct--a--atatacagctt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatacgca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430811.1_Coxsackievirus_A16_strain_CVA16/Homo_sapiens/VNM/9.1/2014_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------atcac-gaccaa-tagtaggcgtggcgcgccagccacgtcttgg-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgtcatccggctaactacttcgagaaacc-tagtagcatcgtgaaagttgcggagtgtttcgttcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggcag-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaatcca-ggggg-cagtgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tacctg----tttgtt-ggatacgtccctc-----tcaattt--------------caaggtcattaaa-actcttgattatatattacttctcaa--ctgtgaga-----aatggggtcacaagtctctactcagcgatccgggtcgcatgagaactcaaattctgcatcgg-aaggctcaaccataaattatacaactataaactactacaaggatgcatatgctgcgagcgcggggcgccaggatatgtctcaagacccgaagagatttaccgaccctgttatggacgttatacatgagatggccccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggcccagcttaccattgggaattctaccatcaccacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtatcggtgaacagatttttcacactagatactaaatcttgggcaaagg------------------attcaaagggatggtattggaaattccccgatgttttgacagaggtaggcgtgtttggtcaaaatgctcagtttcactacctgtatcgatctggattttgcgtgcacgtccagtgcaatgcaagtaaattccaccagggtgctttactggtggccgtgctacctgagtatgtgctcggcactatcgcaggagggactgggaacg------agaattctcatcctccctacgctactacacagcctggtcaggttggtgcagtcctgacgcacccatatgtactagatgcagggatccctttgagccaattaactgtgtgtcctcaccagtggatcaacctgagaactaataattgtgcaaccattatagtcccatatatgaacacagttccatttgattcagctcttaaccactgtaattttggtttgctggtcgtcccggtggtaccattggactttaacacaggtgccacgtctgaaattcctattacagttaccatagctcccatgtgtgcagagtttgcgggtctgcgacaggcagtgaagcaaggcataccaacagagcttaagcctggtaccaatcagtttctcactaccgacgatggtgtctctgcaccaattttgccaggctttcacccaaccccacctatacacataccaggagaagtgcacaacttattggaaatatgcagagtggagaccattttagaggttaacaa----------cctgaagactaatgagaccaccccc------atgcagcgtttgtgctttccagtgtcggttcagagta------aaacaggtgagttgtgtgctgcctttagagcagatcctggaagagatggaccatggcagtccacgatactgggtcaactctgcagatactacacccagtggtcgggttcattagaagtaacatttatgtttgcgggttcattcatggccacaggcaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaattacagcaatgttagggacgcatgtgatctgggacttcggattgcaatcctctgtgacgttggttgtgccatggattagcaatacacattacagggcgcacgcccgtgctgggtactttgactattacactaccggcattataactatatggtatcaaaccaactatgtggtacctattggcgctcccactacagcatacatcgtagctctggcagcagcccaagacaactttaccatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatccc--------attgctgacatgatcg---accaaactgt--------------------------gaataaccaagtgaaccgctccttaactgcactacaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtgccagcactacaagctgcggagacgggggcgtcatcaaatgccagtgacaagaatctcattgagacgagatgtgtgttgaaccatcattcaacacaggagacagccatcgggaatttctttagccgtgctggcttggttagcatcatcacaatgcccaccacgggtacaca-gaatacagacggttacgttaactgggacattgacttgatgggatatgctcaactacggcgcaaatgcgagttgttcacgtatatgcgctttgatgctgagttcacatttgttgtagccaaacccaatggtgaactggtcccccaattactgcagtacatgtatgtcccaccaggggccccgaaacccaaatccagagattcatttgcttggcaaactgctaccaacccgtctgtatttgtgaaaatgacagacccaccagctcaagtgtcagtccccttcatgtcgccagccagtgcataccaatggttttacgatggttatcccaccttcggggagcatctccaagcaaatgacctagattatggccaatgcccgaacaatatgatgggcacctttagcattagaactgtagggactgagaagtcaccacactccattactctgaggatatatatgaggattaaacacgtcagagcatggatcccaaggcctctaagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgacattaagtgtactagcaccagtagagacaagat---aacaac---------------------------------------attagga------------------------------------------aagtttgggcagcagtcgggtgccatatatgtaggcaactatagggtagtgaatcggcatcttgccacacacaacgactgggcgaacctcgtgtgggaggacagctctagagacctgttagtttcttccaccactgcccaggggtgcgataccatcgccagatgcgattgtcaaaccggagtatattattgcaactccaaaagaaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattacccagctagataccaatcccacctcatgcttgctgtaggccattcagaacccggcgactgtggtggcatcctcagatgccaacacggtgtgataggaattgtctccactggtggtaatggtcttgtggggtttgctgacgtcagagatctcctgtggctggatgaagaagcaatggagcaaggagtgtctgactatatcaaa-ggcctcggtgacgcttttggcatgggcttcactgatgcagtgtccagggaagtggaggcattgaagaaccatttaattggctcagaaggggctgttgagaagattctgaagaacttggtgaaactaatttcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgccatggaagcccttgggcatggataaaagcaaagacagcctctattcttggtattcccatagtgcaaaagcagagcgcttcatggctaaagaagtttaatgacatggctaatgctgcaaagggacttgagtggatttctagtaaaatcagcaagtttattgactggcttaaggaaaagattatcccagccgctaaagagaaagttgaattcttaaacaacttgaagcagcttccc-ttactggagaaccaaatttcgaatctcgaacagtctgctgcctcgcaggaggatctagaagctatgtttggtaatgtgtcatatttggccca---------tttttgccgcaagtttcagccactctacgcaaccgaagctaaacgagtctatgcgttagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctccccaggaacaggtaaatcgcttgccacaggcatcatagctagagccattgccgacaaatatcattctagtgtttactcacttcctccagacccagaccattttgatggatacaagcaacaagcagtcactgttatggatgacctttgtcaaaacccagatggaaaggacatgtcactattttgccaaatggtttctacagtggattttataccacccatggcatccctggaagagaagggagtgtctttcacctctaagtttgtcattgcatcgaccaatgctagcaacatagtagttcccacagtttcagactcagatgcgattcgcagacgattctacatggactgtgatatagaggtgacagattcctacaagacagaccttggtcgacttgatgcaggtagggccgctaagctttgcacggagaataacaccgccaactttaagagatgcagcccactagtgtgtggcaaagctattcaactaagagataggaaatctaaagtgagatacagcattgatactgtagtgtcggagctaatcagagagtataataatagatctgccattggtaatactatagaagctctcttccaaggaccccttaagttcaagcctataagaatt---agccttgaagagaagccagccccagatgccatcagtgacctacttgctagtgtggatagcgaggaggttcggcaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggaacgtcaccttaacagagcagtgctagtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgctgggtttcagggtgcttattctggcgcgcctaagcaagctcttaaaaaacccgtgctaagaacagccacagttcaaggaccgagcttagactttgccttatcccttttaagacgcaacattagacaggtgcaaactgatcaagggcacttcaccatgttaggggtacgagatcgcctggccattctgccacgccactcgcaaccaggaaaaactatctgggtggaacacaaattgattaatgtgctagatgctgttgagttagtagatgagcaaggtgtgaatttggaacttacactagtaactttagataccaacgaaaagtttagggacgtcaccaagtttattccagagacaatcactggagcaagcgacgcaaccttgatcatcaacactgagcacatgccctcaatgttcgtcccagtgggtgatgttgtacaatatggattcttgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggagtggtcacctcagttggtaagatcattggaatccatattggtgggaacggacgccagggtttctgtgctggattgaagaggggctactttgccagtgaacagggagagatccagtggatgaagcccaataaagagactgggagattgaatgttaatggcccgacccgtaccaaattagagcctagtgtattctatgatgtgtttgagggcagtaaagaaccagcagtcttaaccagtaaggaccccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccttgtatgagcctgatgagtatgtgacgcaggctgctctccactatgctaaccagttaaagcaattagacatcaatactaacaagatgagcatggaagaagcatgctatggcactgagtatctggaggccatagacctacacaccagtgctgggtacccctatagtgccttgggcatcaagaaaagagacatactcgacccagtcactagagataccactaaaatgaaattctacatggacaaatatgggttagacatgccctattccacttatgtgaaagatgagctcagatccttagataagatcaagaaggggaaatcccgtttgattgaagccagcagcctgaatgattcagtctatcttaggatgacttttgggcatctctatgagatttttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctaccgggatcgctctttgcatttgattattcagggtatgatgcaagtctcagcccagtgtggtttagagctttagaggtagtcctccgtgagattggttactcagaggaggctgtgtcactaatagaagggatcaaccacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggttgttccggcacttccatcttcaactctatgattaataacataataatcagaactctcttgatcaaaacctttaaggggatcgatttggatgagttgaacatggtagcttacggagatgatgtgctggctagctatccattccctattgactgttcggagttggccaagactggtaaagagtatggattaacaatgacacctgctgacaagtcaccctgctttaacgaagtcacttgggaaaatgccacattcttaaagagaggcttcttgccagatcaccaatttccattccttatccaccccaccatgcctatgagagagattcatgagtccattcgttggactaaggatgcacgcaacactcaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcggttcctattgggaaagccttggctataccaaattttgaaaacctgagaagaaattggctcgaattatttt--g--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430814.1_Coxsackievirus_A16_strain_CVA16/Homo_sapiens/VNM/10.2/2014_polyprotein_gene_partial_cds
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ctatcac-gaccaa-tagtaggcgtggcgcgccagccacgtcttgg-tcaagcacttctg-tttccccggaccga-tatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcatcgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaatcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tacctg----tttgtt-gggtacgtccctc-----tcaattt--------------caaggtcattaaa-actcttgattatatattacttctcaa--ctgtgaga-----aatggggtcacaagtctctactcagcgatccgggtcgcatgagaactcaaattctgcatcgg-aaggctcaaccataaattatacaactataaactattacaaggatgcatatgctgcgagcgcggggcgccaggatatgtctcaagacccgaagaaatttaccgaccctgttatggacgttatacatgagatggccccaccgctcaagtccccaagcgctgaggcatgtggctatagtgatcgtgtggcccagcttaccattgggaattctaccatcactacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcgacggcagtcgacaagcccacacgacctgacgtgtcggtgaacagatttttcacactagatactaaatcttgggcaaagg------------------attcaaaggggtggtattggaaattccccgatgttttgacagaggtaggcgtgtttggtcaaaatgctcagtttcactacctgtatcgatctggattttgcgtgcacgtccagtgcaatgcaagtaaattccaccagggtgctttattggtagccgtgctacctgagtatgtgctcggcactatcgcaggagggactgggaacg------agaattctcatcctccctacgctactacacagcctggtcaggttggtgcagtcctgacgcacccatatgtactagatgcagggatccctttgagtcaattaactgtgtgtcctcaccagtggatcaacctgagaactaataattgtgcaaccattatagtcccatacatgaacacagttccatttgattcagctcttaaccactgtaatttcggtttgctggtcgtcccggtggtgccattggactttaacacaggagccacgtccgaaattcctattacagtcaccatagctcccatgtgcgcagagtttgcgggtctgcgtcaggcagtgaagcaaggcataccaacagagctcaagcctggtaccaatcagtttctcactaccgatgatggtgtctctgcaccaattttaccaggcttccacccaaccccacctatacacataccaggagaagtgcacaacttattggaaatatgcagagtggagaccattttagaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtatcggttcaaagta------aaacaggtgagttgtgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggtcaactctgcagatactacacccagtggtcgggttcattggaagtaacatttatgtttgcgggctcattcatggccacgggcaagatgctcattgcctacaccccacctgggggaaatgtgcctgcagacagaatcacagcaatgttagggacgcatgtgatctgggacttcggattgcaatcctctgtgacgttggttgtgccttggattagcaatacacattacagggcgcacgcccgtgctgggtactttgactattacactaccggcattataactatatggtatcaaaccaactatgtggtacctattggcgctcccactacagcatacattgtagctctggcagcagcccaagacaactttaccatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatccc--------attgctgacatgatcg---accaaactgt--------------------------gaataaccaagtgaaccgctccttaactgcattacaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtgccagcactacaagctgcggagacgggggcgtcatcaaatgccagtgacaagaatctcattgagacgagatgtgtgttgaaccatcattccacacaggagacagccatcgggaatttctttagccgtgctggtttggttagcatcatcacaatgcccaccacgggtacaca-gaacacagacggttacgttaactgggacattgacttgatgggatatgctcaactacggcgcaaatgcgagttgttcacgtatatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgaactggtcccccaattactgcagtacatgtatgtcccaccaggggccccgaaacccaaatccagagattcatttgcttggcaaactgctaccaacccgtctgtgtttgtgaaaatgacagacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttatcccaccttcggggagcatctccaagcaaatgacctagattatggccaatgcccgaacaatatgatgggcacctttagcattagaactgtagggactgagaagtcaccacactccattactctgaggatatatatgaggattaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgacattaagtgcactagtaccagtagagacaagat---aacaac---------------------------------------attagga------------------------------------------aagtttgggcagcagtcgggtgccatatatgtaggcaactatagggtagtgaatcggcatcttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagagacctgttagtttcttccaccactgcccaggggtgcgataccatcgctagatgcgattgtcaaaccggagtatattattgcagctccaaaagaaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattacccagctagataccaatcccacctcatgcttgctgtgggccattcagaacccggcgactgtggtggcatcctcagatgccaacacggtgtgataggaattgtctccactggtggtaatggccttgtgggatttgctgacgtcagagatctcttgtggctggatgaagaagcaatggagcaaggagtgtctgactatatcaaa-ggcctcggtgatgcttttggcatgggcttcactgatgcagtgtccagggaagtggaggcattgaagaaccatttaattggctcagagggggctgttgagaaaattttgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgccatggaagcccttgggcatggataaaagcaaagacagcctctattcttggtattcccatagtgcaaaagcagagcgcttcatggctaaagaagtttaatgacatggctaatgctgcaaagggacttgagtggatttctagtaaaatcagcaagtttattgattggcttaaggaaaagattatcccagccgctaaagagaaagttgaattcttgaacaacttgaagcagcttccc-ttactggagaaccaaatttcgaatctcgaacagtctgctgcctcgcaggaggatctagaagctatgtttggtaatgtgtcatatttggccca---------tttttgccgcaagtttcagccactctacgcaaccgaagctgcagatatctatgcgttagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctccccaggaacaggcaagtcgcttgccacaggcatcatagctagagccattgccgacaaatatcattctagtgtttactcacttcctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctttgtcaaaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaagggagtgtctttcacctctaagtttgtcattgcatcgaccaatgctagcaacatagtagttcccacagtttcagactcagatgcgattcgcagacgattctacatggactgtgatatagaggtgacagattcctacaagacagatcttggccgacttgatgcaggtagggccgctaagctttgcacggagaacaacaccgccaactttaagagatgcagcccactagtgtgtggcaaagctattcaactaagagataggaaatctaaagtgagatacagcattgatactgtagtgtcggagctaattagagagtataataatagatctgccattggtaatactatagaagctctcttccaaggaccccttaagttcaagcctataagaatt---agccttgaagagaagccagccccagatgccatcagtgacctacttgctagtgtggatagcgaggaggttcggcaatactgc-agagaacaggggtggataattccagaaacaccggccaatgtggaacgtcacctcaacagagcggtgctagtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgctgggtttcagggtgcttattctggcgcgcctaagcaagctcttaaaaaacccgtgctaagaacagccacggttcaaggaccgagcttagattttgccttatcccttttaaggcgcaacattagacaggtgcaaactgatcaagggcacttcaccatgttaggggtacgagatcgcctggccatcctgccacgccactcacaaccaggaaaaactatctgggtggaacacaaattgattaatgtgctagatgctgttgagttagtagatgagcaaggtgtgaatttggaacttacactagtaactttagacaccaacgaaaagtttagggacgttaccaagtttattccagagacaatcactggagcaagcgacgcaaccttgatcattaacactgagcacatgccctcaatgttcgtcccagtgggtgatgttgtacaatatggattcttgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggagtagtcacctcagttggtaagatcattggaatccacattggtgggaacggacgccagggtttctgtgctggattgaagaggggctactttgccagtgaacagggagagatccagtggatgaagcccaataaagagactgggagattgaatgttaatggtccgacccgtaccaaattagagcctagtgtattccatgatgtgtttgagggcagtaaagaaccagcagtcttaaccagtaaagaccccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccttgcatgagcctgatgagtatgtgacgcaggctgctctccactatgctaaccagttaaagcaattagacatcaatactaacaagatgagcatggaagaagcatgctatggcactgaatatttggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggcatcaagaaaagggacatactcgacccagtcactagagataccactaaaatgaaattctacatggacaaatatgggttagacatgccctattctacttatgtgaaagatgagctcagatccttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgattcagtctatcttaggatgacttttgggcatctctatgagacttttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctaccgggatcgctctttgcatttgattattcagggtatgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgaggttggttactcagaggaggccgtgtcactaatagaagggatcaaccacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggttgttccggcacttccatcttcaactctatgattaataacataataatcagaactctcttgatcaaaacctttaaggggatcgatttggatgagttgaacatggtagcttacggagatgatgtgctggctagctatccattccctattgactgttcggagttggccaagactggtaaagagtatgggttaacaatgacacctgctgacaagtcaccctgctttaacgaagtcacttgggaaaatgctacattcttaaagagaggcttcttgccagatcaccaatttccattccttatccaccccaccatgcctatgagagagattcatgagtccattcgttggactaaggatgcacgcaacactcaggatcacgtgcgctccttgtgccttttagcatggcacaatgggaaggaggastatga-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430815.1_Coxsackievirus_A16_strain_CVA16/Homo_sapiens/VNM/11.1/2014_polyprotein_gene_partial_cds
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gctctgcaga-tatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcatcattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaaccca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tacctg----tttgtt-ggatacgtccctc-----tcaattt--------------caaagtcattaaa-actcttgattatatattactcctcaa--ctgtgaga-----aatggggtcacaagtctctactcagcgatccgggtcgcatgagaactcaaattctgcatcgg-aaggctcaaccataaattatacaactataaactactacaaggatgcatatgctgcgagcgcggggcgccaggatatgtctcaagacccgaagaaatttaccgaccctgttatggacgttatacatgagatggccccaccgctcaagtctccaagcgctgaggcatgtggctatagtgatcgtgtggcccagcttaccattgggaattctaccatcactacgcaagaagcagctaacatagttatagcctatggggagtggcctgaatattgcccagacacggatgcaacggcagtcgacaagcccacacgacctgacgtgtcggtgaatagattcttcacactagatactaaatcttgggcaaagg------------------actcaaagggatggtattggaaattccccgatgttttgacagaggtaggtgtgtttggtcaaaatgctcagtttcactacctgtatcgatctggattttgcgtgcacgtccagtgcaatgcaagtaaattccaccagggtgctttactggtggccgtgctacctgagtatgtgctcggcactatcgcaggagggactgggaacg------agaattctcatcctccctatgctactacacagcctggtcaggttggtgcagtcctgacgcacccatatgtactagatgcagggatccctttgagccaattaactgtgtgtcctcaccagtggatcaacctgagaactaataattgtgcaaccattatagtcccatatatgaacacagttccatttgattcagctcttaaccactgtaattttggtctgctggtcgtcccggtggtaccattggactttaacacaggtgccacgtctgaaattcctattacagtcaccatagctcccatgtgtgcagagtttgcgggcctgcgtcaggcagtgaagcaaggcataccaacagagctcaagcctggtaccaatcagtttctcactaccgatgatggtgtctctgcaccaattttaccaggcttccacccaaccccacctatacacataccaggagaagtgcacaacttattggaaatatgcagagtggagaccattttagaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggttcagagca------aaacaggtgagttgtgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggtcaactctgcagatactacacccagtggtcgggttcattggaagtaacatttatgtttgcgggttcattcatggccacaggcaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgttagggacgcatgtgatctgggactttggattgcaatcctctgtgacgttggttgtgccatggattagcaatacacattacagggcgcacgcccgtgctgggtactttgactattacactaccggcattataactatatggtatcaaaccaactatgtggtacctattggcgctcccactacagcatacattgtagctctggcagcagcccaagacaacttcaccatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatccc--------attgctgacatgatcg---accaaactgt--------------------------gaacaaccaagtgaaccgctccttaactgcattacaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtgccagcactacaagctgcggagacgggagcgtcgtcaaatgccagtgacaagaatctcattgagacgagatgtgtgttgaaccatcattccacacaggagacagccattgggaatttctttagccgtgctggtttggttagcattatcacaatgcccaccacgggtacaca-gaacacagacggttacgttaactgggacattgacttgatgggatatgctcaactacggcgcaaatgcgagttgttcacgtatatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgaactggtcccccaattactgcagtacatgtatgtcccaccaggggccccgaaacccaaatccagagattcattcgcttggcaaactgccaccaacccgtctgtatttgtgaaaatgacagacccaccagctcaagtgtcagtccccttcatgtcgccagccagtgcataccaatggttttacgatggttatcccacctttggggagcatctccaagcaaatgacctagattatggccaatgcccgaacaatatgatgggcacctttagcattagaactgtagggactgagaagtcaccgcactccattactctgaggatatacatgaggattaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgacattaagtgtactagtaccagtagagacaagat---aacaac---------------------------------------attagga------------------------------------------aagtttgggcagcagtcgggtgccatatatgtaggcaactatagggtagtgaatcggcatcttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagagacctgttagtttcttccaccactgcccaggggtgcgataccatcgctagatgcgattgtcaaaccggagtatattattgcagctccaaaagaaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattacccagctagataccaatcccacctcatgcttgctgtaggccattcrgaacccggcgactgtggtggcatcctcagatgccaacacggtgtgataggaattgtctccactggtggtaatggtcttgtggggtttgctgacgtcagagatctcttgtggctggatgaagaagcaatggagcaaggagtgtctgactatatcaag-ggcctcggtgacgcttttggcatgggcttcactgatgcagtgtccagggaagtggaggcattgaagaaccatttaattggctcagaaggcgctgttgaaaagattctgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcaaagacagcctctattcttggtattcccatagtgcaaaagcagagtgcttcatggctaaagaagtttaatgacatggctaatgctgcaaagggacttgagtggatttctagtaaaatcagcaagtttattgattggcttaaggaaaagattatcccagccgctaaagagaaagttgaattcttgaacaacttgaagcagcttccc-ttactggagaaccaaatttcgaatctcgaacagtctgctgcctcgcaggaggatctagaagctatgtttggtaatgtgtcatatttggccca---------tttttgccgcaagtttcagccactctacgcaaccgaagctaaacgagtctatgcgttagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctccccaggaacaggcaagtcgcttgccacgggcatcatagctagagccattgccgacaaatatcattctagtgtttactcacttcctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctttgtcaaaacccagatggaaaggacatgtcactattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaagggagtgtctttcacctctaagtttgtcattgcatcgaccaatgctagcaacatagtagttcccacagtttcagactcagatgcgattcgcagacgattctacatggactgtgatatagaagtgacagattcctacaagacagaccttggccgacttgatgcaggtagggccgctaagctttgcacggagaacaacaccgccaactttaagagatgcagtccactagtgtgtggcaaagctattcaactaagagacaggaaatctaaagtgagatacagcattgatactgtagtgtcggagctaatcagagagtataataatagatctgccattggtaatactatagaagctctcttccaaggaccccttaagttcaagcctataagaatt---agccttgaagagaagccagccccagatgccatcagtgacctacttgctagtgtggatagcgaggaggttcggcaatactgc-agggagcaggggtggataattccagaaacaccggccaatgtggaacgtcacctcaacagagcagtgctagtgatgcagtccatcgccacagtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgctgggtttcagggtgcttattctggcgcgcctaagcaagctcttaagaaacccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatcccttttaaggcgcaacattagacaggtgcaaactgatcaagggcacttcaccatgttaggggtacgagatcgcctggccatcctgccacgccactcgcaaccaggaaagactatctgggtggaacacaaattgattaatgtactagatgctgttgagttagtagatgagcaaggtgtgaatttggaacttacactagtaactttagacaccaacgaaaagtttagggacgtcaccaagtttattccagagacaatcactggagcaagcgacgcaaccttgatcatcaatactgagcacatgccctcaatgttcgtcccagtgggcgatgttgtacaatatggattcttgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggtgtagtcacctcagttggtaaaatcattggaatccacattggtgggaacggacgccagggtttctgtgctggattgaaaaggggctactttgccagtgaacagggagagatccagtggatgaagcccaataaagagactgggagattgaatgttaatggcccaacccgtaccaaattagagcctagtgtattccatgatgtgtttgagggcagtaaagaaccagcagtcttaaccagtaaggaccccagactcgaggttgattttgagcaagctttgttttccaaatatgtgggaaacaccttgcatgagcctgatgagtatgtgacgcaggctgctctccactatgctaaccagttaaagcaattagacatcaatactaacaagatgagcatggaagaagcatgctatggcactgaatatctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggcatcaagaaaagggacatactcgacccagtcactagagataccactaaaatgaaattctacatggacaaatatgggttagacatgccctattccacttatgtgaaagatgagctcagatccttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgattcagtctatcttagaatgacttttgggcatctctatgagacttttcatgccaacccggggactgtgaccggatctgcagtggggtgcaatcctgatgtgttctggagcaaactaccgatcttgctaccgggatcgctctttgcatttgattattcagggtatgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagattggttactcagaggaggctgtgtcactaatagaagggatcaaccacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggttgttccggcacttccatcttcaactctatgattaataacataataatcagaactctcttgatcaaaacctttaaggggatcgatttggatgagttgaacatggtagcttacggagatgatgtgctggctagctatccattccctattgactgttcggagttggccaagactggtaaagagtatggattaacaatgacacctgctgacaagtcaccctgctttaacgaagtcacttgggaaaatgctacattcttaaagagaggcttcttgccagatcaccaatttccattccttatccaccccaccatgcctatgagagagattcatgagtccattcgttggactaaggatgcacgcaacactcaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggagga-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JF738003.1_Human_coxsackievirus_A16_isolate_THA-CA16-090_complete_genome
---------------------------------------------------------------------------------------------------------------------------acccc---t---cccc-t-----aagca-gtaacttagaagc------------ttcatactatcac-gaccag-tagtaggcgtggcgcaccagccacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcatcgtgaaagttgcggggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgtg-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggcaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaatcca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctt-tattggctgcttatggtgacaattgaa-------gagttgttaccatatagctattggattggccatccgg--taaccaacagagctattgtt-----tacctg----ttcatt-ggatacgtccctc-----tcaatct--------------caaggccattaaa-actcttgattatatattacttctcaa--ctataaga-----aatggggtcacaagtctctactcagcgatccgggtcgcatgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactactacaaggatgcatatgctgcgagcgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgttatggacgttatacatgagatggccccaccgctcaagtctccaagcgctgaggcatgtggctatagtgatcgtgtagcccagcttaccattgggaattctaccatcactacgcaagaagcagctaacatagtcatagcctatggggagtggcctgaatattgcccagacacagatgcaacggcagtcgacaagcccacccgacctgacgtgtcagtgaacagatttttcacactagatactaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaggtgggcgtgtttggtcaaaatgctcagtttcactacctgtatcgatctggattttgcgtgcacgtccagtgcaatgcaagtaaattccaccagggtgctttactggtggccgtgctacctgagtatgtgctcggcactatcgcaggagggactgggaacg------agaattctcatcctccctacgctactacacagcctggccaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgccctcaccagtggatcaacctgagaaccaataattgtgcaaccattatagttccatatatgaacacagttccgtttgattcagctcttaacccctgcaattttggcttactggtcatcccggtggtaccattggactttaacacaggtgccacgtctgaaattcctattacagtcaccatagctcccatgtgtgcagaatttgcgggtctgcgtcaggcagtgaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactaccgatgatggtgtctctgcaccaattttaccaggtttccacccaactccacctatacatataccaggagaagtgcacaacttattggaaatatgcagagtggagaccatcttagaggttaacaa----------cctgaagaccaatgagaccacccct------atgcagcgcttgtgctttccagtgtcggttcagagta------aaacaggcgagttgtgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggtcaactctgcagatactacacccagtggtcgggttcattggaagtaacgttcatgtttgcgggctcattcatggccacaggcaagatgctcattgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctagggacgcatgtgatctgggacttcggattacaatcctctgtgacgttggttgtgccatggattagcaacacacattacagggcgcacgcccgtgctgggtactttgactattacaccaccggcattataactatatggtatcaaaccaactatgtggtacctattggtgctcccactacagcatacatcgtagctctggcagcagcccaggacaactttaccatgaaactatgcaaggacacggaggatattgagcaaacagctaatatacaaggggatccc--------attgcagacatgatcg---accaaactgt--------------------------gaataaccaggtgaaccgctccttaactgcgttgcaagtacta--------cccacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtgccagcactacaagctgcggagacgggggcgtcgtcaaatgctagtgacaggaatctcattgagacgcgatgtgtgttgaaccatcactccacacaggagacagccatcgggaatttctttagccgtgctggtttggttagcatcatcacaatgcccaccacgggcacaca-gaacacagatggttacgttaactgggacattgacttgatgggatatgctcaactacggcgcaaatgcgagttgttcacatatatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgaactggtcccccaattactgcagtacatgtatgtcccaccaggggctccgaaacccacatccagagattcattcgcttggcaaactgctaccaacccgtctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttacgatggttatcccaccttcggggagcatctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattagaactgtagggactgagaagtcaccacactccattactctgagggtgtatatgaggattaaacacgtcagagcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagtactagtagagacaagat---aacaac---------------------------------------attagga------------------------------------------aagtttgggcagcagtcaggtgccatatatgtaggcaattatagggtagtgaatcggcatcttgccacacacaacgactgggcaaaccttgtgtgggaggacagttctagggacctgttagtctcttccaccactgcccaggggtgcgataccatcgctagatgcgattgtcaaaccggagtgtactattgcagctccaaaagaaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattatccagctagataccaatcccacctcatgcttgctgtaggccattcagaacccggcgactgtggtggcatcctcagatgccaacacggtgtggtaggaattgtctccactggtggaaatggtcttgtgggatttgctgacgtcagagatctcctatggttggatgaagaagcaatggagcaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggcttcactgatgcagtgtctagggaagtggaggcattaaagaaccatttaattggctcagaaggggctgttgaaaagattctgaagaacttggtgaagctcatttcagctttagtcatagtcgttaggagtgattatgacatggtcactctcacagctacgcttgccttgattgggtgccatggaagcccttgggcatggataaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggctaacgctgcaaaggggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattatcccagctgctaaagagaaagttgaattcttgaacaacttgaagcagcttccc-ttactggagaaccaaatttcaaatcttgaacagtctgctgcctcgcaagaggatctagaagctatgtttggtaatgtgtcatatttggccca---------tttctgccgcaagtttcagccactctacgcgaccgaagctaaaagagtctatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctccccaggaacaggcaagtcgcttgccacgggcattatagctagagccattgccgataaatatcattctagtgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctttgtcaaaacccagatggaaaggacatgtcgctattttgccagatggtttccacagtggatttcataccacccatggcatccctggaagagaagggagtgtctttcacctccaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagactcagatgcgattcgcagacgattctacatggactgtgatatagaggtgacagactcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctttgcacggagaacaacaccgccaactttaagagatgcagcccgctggtatgtggcaaagctattcaattaagagataggaaatctaaagtgagatacagcattgatactgtagtgtcagagctaatcagagagtataataatagatctgccattggcaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagagaagccagccccagatgccatcagtgacctacttgctagtgtggatagcgaggaggttcggcaatactgc-agggagcaggggtggataattccagaagcaccggccaatgtggaacgtcacctcaacagagcagtgctagtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgctgggtttcagggtgcttattctggcgcgcctaagcaagctcttaaaaaacccgtgctaagaacagccacggttcaaggaccaagcttagactttgccttatccctcttaaggcgcaacattagacaggtgcaaactgatcaagggcacttcaccatgttaggggtacgggaccgcctggccatcctgccacgccactcgcaaccaggaaaaactatctgggtggagcacaaattaattaatgtgctagatgctgttgagttagtagatgagcaaggtgtgaatttggaacttacactagtaactttagacaccaacgaaaagtttagggacgtcaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttgatcatcaatactgagcacatgccctcaatgttcgtcccagtgggtgatgttgtacaatatggattcctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacaaaggcaggacagtgtggaggagtagtcacctcagtcggcaagatcattggaatccacattggtgggaacgggcgccagggtttctgtgctggattgaagagaggttactttgccagtgaacagggagagatccagtggatgaagtccaataaagagactgggagactgaatgttaatggcccaacccgtaccaaattggagcccagtgtatttcatgatgtgtttgagggcagtaaagaaccagcagtcttaaccagtaaagatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcatgagcccgatgagtacgtaacacaggctgctctccactatgctaaccagttaaagcaattagacatcaatactaacaaaatgagcatggaagaagcatgctatggcaccgaatacttggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggtatcaagaaaagggacatactcgacccagtcactagagataccactaaaatgaaattctacatggacaaatatgggttagacatgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgattcagtctaccttaggatgacttttgggcatctctatgagacttttcatgccaacccggggactgtgactggatctgcagtggggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccgggatcgctctttgcatttgactattcagggtatgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagatcggttactcagaggaggctgtatcactaatagaagggatcaaccacacccatcatgtgtatcggaataagacatattgtgttcttggtggaatgccctcaggttgttctggcacttccatcttcaactccatgattaataacataataatcagaactctcttgatcaaaacttttaaggggatcgatttggatgagttgaatatggtagcttacggagatgatgtgttggctagctatccattccctattgactgctcggagttggccaagactggtaaagagtatggattaacaatgacacctgctgacaaatcaccctgcttcaacgaagtcacttgggaaaatgctacattcttaaagagaggcttcttgccagatcaccaatttccattccttatccaccccaccatgcctatgagggagatccatgagtccattcgttggactaaggatgcacgcaacactcaggatcacgtgcgctccttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaattttgaaaacctgagaagaaattggctcgaattatttt--a--aaatacagctt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----t-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617094.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_B_BUD25_HUN_2008
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttaca-----acccc---t---cccc-t-----aagca-gtaacttagaagc------------ctcacactatcac-gaccag-tagtgggcgtggcacaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaagcgttcgttatccggctaactacttcgagaaact-tagtagcaccgtgaaagttgcggagagtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaatcca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---gttcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagaactattgtt-----tacctg----tttatt-ggatacgtccctc-----ttaatct--------------caaggtcattcaa-actcttgattatatattactccttaa--ttgtaaga-----aatggggtcacaagtctctactcagcgatccgggtcacatgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaattactacaaggatgcatacgctgcgagcgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgtcatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggcccaacttaccattggaaactctaccatcacgacgcaggaagcggctaacatagttatagcctatggagagtggcctgaatattgcccagacacagatgcaacagcagtcgacaagcccacacgacctgacgtgtcagtgaatagatttttcacgctagacactaaatcttgggccaagg------------------attcaaagggatggtactggaaattccctgatgttttgacagaagtaggtgtgtttggtcaaaacgctcagtttcactacctgtatcgatctggattttgcgtgcacgtccagtgcaatgcaagtaaatttcaccagggtgctttactggtggccgtgctgcctgagtatgtgctcggcactattgcaggtgggactgggaacg------agaattctcatcctccctacgccactacacagcctggccaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgccctcaccagtggatcaacctgagaaccaataactgtgcaaccattatagttccatatatgaacacagttccatttgattcagctcttaaccactgtaattttggtctactggtcatcccggtagtaccattggacttcaacgcaggtgccacatctgaaatccccattacagtcaccatagctcccatgtgtgcagaatttgcgggtctgcgccaggcagtgaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactaccgatgatggtgtttctgcaccaattttaccaggtttccacccaactccacctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagta------aaacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggtcaactctgcaggtactacacccaatggtcgggttcattggaggtgacattcatgtttgcgggctcattcatggccacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgttaggaacgcatgtgatctgggacttcgggttacagtcttctgtgacgttggtcgtgccatggattagcaacacacactacagggcgcacgcccgtgctgggtacttcgactattacaccaccggcattataaccatatggtatcaaactaactatgtagtacctattggtgctcccactacagcatacatcgtagctttggcagcagcccaggacaattttaccatgaaactgtgcaaggacacggaggacattgagcaaacagctaatatacaaggggatccc--------attgcagacatgattg---accaaaccgt--------------------------gaataatcaagtgaaccgctccttaactgcattacaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattgggcactggtgttgtaccagcactacaagctgcagagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagacgagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggttagcatcattacaatgcccaccacgggtacaca-gaacacagatggttatgttaactgggacattgatttgatgggatacgctcaactacggcgtaaatgcgagttgttcacttatatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattattacagtacatgtatgtcccgccaggggctccgaaacccacttccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaagatgacagacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcgtatcaatggttttatgatggttatcccacctttggggagcatctccaagcaaatgacctagattatggccaatgtccgaataatatgatgggcacttttagcattagaactgtagggactgagaagtcaccacactccattaccctgagggtatatatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctacttgtttaagaccaatccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggcgccatatacgtaggcaactatagggtagtgaatcggcatcttgccacgcacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgtgacactatcgctagatgcaattgccaaaccgggatttattattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaggctagtgagtattacccagctaggtaccaatcccacctcatgcttgctgtaggccattcggaacctggtgactgcggtggcatcctcaggtgccaacatggtgtgataggaattgtctccactggtgggaatggccttgtagggtttgctgatgtcagagatcttctatggctggatgaagaagcaatggaacaaggggtatctgactacattaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtctagggaagtggaggcgttgaagaaccatttaattggttcagaaggggctgttgagaagatcctgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggataaaagcgaagacagcctctattcttggtattcccatagtacaaaaacagagtgcttcatggctaaagaagtttaatgatatggctagcgctgcaaaggggcttgagtggatttctagtaaaattagcaagttcattgattggcttaaggagaagattattccagccgctaaagagaaagttgaattcttgaacaacctgaagcagcttccc-ttactggagaaccaaatttcaaatcttgagcagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttggccca---------cttctgccgcaagtttcagccactctacgcgaccgaagctaaaagagtctatgccctagagaaaaggatgaacaactacatgcaattcaagagcaaacaccgtattgaacctgtatgtttgatcatcagaggctctccaggaacaggcaagtcacttgccacgggcatcatagctagggccattgctgacaaatatcattctagcgtctactcactccctccggacccagaccactttgatggatacaagcaacaagtggtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcgctattttgccagatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctccaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagattcagatgcgattcgcagacgattctacatggactgcgatatagaggtaacagactcctataagacggaccttggccgactcgacgcaggtagggccgctaagctttgcacagaaaacaacaccgctaactttaagagatgcagcccactagtgtgcggcaaagctattcaactaagggacaggaagtctaaagtgagatatagcattgatactgtagtgtcagagctgatcagagagtataataataggtctgccattggtaatactatagaagccctcttccaaggaccccctaagtttaagcctataagaatt---agccttgaagagaagccagccccggatgccatcagcgacctacttgctagtgtagatagcgaggaggttcgccaatactgc-agggaacaggggtggataattccagaaacaccagccaatgtggaacgtcacctcaatagagcagtgctggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttacaaattgttcgctgggtttcagggtgcttattctggcgcgcctaagcaagctctcaaaaagcccatgctaagaacagccacggttcaaggtccgagcttagactttgccttgtcccttttaaggcgtaacattagacaggtgcaaaccgatcaaggacactttaccatgctaggggtacgagaccgcctagccattctgccacgccactcgcaaccaggaaaaactatctgggtggagcacaagttaatcaatgtgctagatgctgttgagttggtagacgagcaaggtgtgaacttggaactcacgctagtaactttagacaccaacgaaaagtttagggatgtcaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttggtcattaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacgaaggcaggacagtgtggaggggtagtcacctcagttggtaagattattggaatccacattggtgggaacggacgccagggtttttgtgctggactgaagagaggctactttgccagtgaacaaggagagatccagtggatgaagcccaataaagagactgggagactgaacattaatggccccacccgtaccaaattggagcccagtatattccatgatgtgtttgagggtaacaaagaaccagcagtcttaaccagtaaggatcctagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacacactgcacgagcctgatgagtacgtgacacaggctgctctccattatgcaaaccagctaaagcaattagacatcaacactagcaagatgagcatggaagaagcgtgctatggcactgaatacttggaggccatagacctgcacaccaccgctgggtacccctatagtgccttgggtgttaagaaaagagacatactcgacccaaccactagggatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacttatgtgaaagatgagcttagatccttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgaggcttttcatgccaacccggggactgtgaccggatctgcagtggggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccgggatcgctctttgcatttgattattcagggtatgatgcaagtctcagcccagtgtggtttagagctttagaggcggttctccgtgagatcggctactcagaggaggctgtgtcactaatagaagggattaaccacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccttcaggctgttccggcacttccatcttcaattccatgattaataacataataatcagaactctcttgattaaaacttttaaggggattgatttagatgagttaaatatggtagcttacggagatgatgtgttagctagttatccattccctattgattgttcggagttagccaaaactggtaaagagtatggactaacaatgacacctgctgacaaatcaccctgctttaacgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaatttccatttcttatccaccccaccatgcccatgagggagattcatgagtccattcgttggactaaggacgcacgtaacactcaggatcacgtgcgctctttgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaatttcgagaacttgagaagaaattggctcgaattatttt--a--acatacagctt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617096.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_B_STU7_DEU_2009
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---cccc-c-----aagca-gtgacttagaagc------------ctcacactatcac-gaccag-tagtgggcgtggcacaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaact-tagtagcaccgtgaaagttgcggagagtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-ctcatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcttaactgcggagcgcgcaccctcaatcca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---gttcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattactccttaa--ttgtaaga-----aatggggtcacaagtctctactcagcgatctgggtcacatgagaactcaaactctgcatcgg-agggctcaaccataaattacacaactataaattactacaaggatgcatacgctgcgagcgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgtcatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggcccaacttaccattggaaactccaccatcacgacgcaggaagcggctaacatagttatagcctatggagagtggcctgaatattgcccagacacagatgcaacggcagtcgacaagcccacacgacctgacgtgtcagtgaatagatttttcacgctagacactaaatcttgggccaagg------------------attcaaagggatggtactggaaattccctgatgttttgacagaagtaggtgtatttggtcaaaacgctcagtttcactacctgtatcgatctggattttgcgtgcacgtccagtgcaatgcaagtaaatttcaccagggtgctttactggtggccgtgctgcctgagtatgtgctcggcactattgcgggtgggactgggaacg------agaattctcatcccccctacgccactacacagcctggccaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgccctcaccagtggatcaacctgagaaccaataactgtgcaaccattatagttccatatatgaacacagttccatttgattcagctcttaaccactgtaattttggtctactggtcatcccggtagtaccattggacttcaacgcaggtgccacatctgaaatccccattacagtcaccatagcccccatgtgtgcagagtttgcgggtctgcgccaggcagtaaagcaaggcataccgacagagctcaaacctggtactaatcagtttcttactaccgatgatggtgtttctgcaccaattttaccaggtttccacccaactccacctatacatataccaggggaggtacacaacctattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctaaagaccaatgagaccaccccc------atgcagcgcttatgctttccagtgtcggtgcagagta------aaacgggtgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggtcaactctgtaggtactacacccaatggtcgggttcattggaggtgacattcatgtttgcgggctcattcatggccacaggcaagatgctcatcgcctacactccacctgggggaaatgtgcctgcggacagaatcacagcaatgttaggaacgcatgtgatctgggacttcgggttacagtcttctgtgacgttggtcgtgccatggattagcaacacacactacagggcgcacgcccgtgccgggtacttcgactattacaccaccggcattataaccatatggtatcaaactaactatgtagtacctattggtgctcccactacagcatacatcgtagctttggcagcagcccaggacaacttcactatgaaactgtgcaaggacacggaggacattgagcaaacagctaatatacaaggagatccc--------attgcagacatgattg---accaaaccgt--------------------------gaataatcaagtgaaccgctccttaactgcattacaagtgtta--------cctacagctgccaatactgaagcaagtagtcacagattgggcactggtgttgtaccagcactacaagctgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagacgagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggttagcatcattacaatgcccaccacgggtacaca-gaacacagatggttacgttaactgggacattgatttgatgggatacgctcaactacggcgcaaatgcgagttgttcacttatatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattgttgcagtacatgtatgtcccgccaggggctccgaaacccacttccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacagacccaccagctcaagtgtcagtccccttcatgtcaccagccagcgcataccaatggttttatgatggttatcccaccttcggggagcatcttcaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcatcagaactgtagggactgagaagtcaccacactccattaccctgagggtatatatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctacttgtttaagaccaatccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttggacagcaatcaggtgccatatatgtgggcaactatagggtggtgaatcggcaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagagacttgttagtctcttccaccactgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggagtatactattgcagttccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggtatcctcaggtgccaacacggtgtaataggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttttatggctggatgaagaagcaatggagcaaggagtgtctgactatatcaaa-ggcctcggtgatgcttttggtatgggcttcactgatgcagtgtccagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacggctacgctagctttgatcgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggctaatgctgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccagccgctaaggagaaagttgaattcttaaacaacctgaagcagcttccc-ctgttagagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatctagaagccatgtttggcaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctatgcggttgaagctaaaagagtttatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccaggaacaggtaagtcacttgctacgggcatcatagctagagctattgctgacaaataccattccagcgtttactcgcttcctccagacccagaccattttgatggatacaagcaacaagtagtcactgtcatggatgatctctgtcaaaacccagatggaaaggacatgtccctattttgccaaatggtttctacagtagactttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaaccaatgctagcaatattgtagtccccacagtctcggattctgatgcgattcgcaggcggttttatatggattgcgatatagaggtgacagattcctacaagacggaccttggccgacttgacgcaggtagggccgctaagctttgcacagaaaataacactgctaactttaagagatgcagcccactagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtagtgtcagagctaatcagagagtacaataataggtctgccattgggaataccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagcgacctacttgctagtgtggatagtgaggaggttcgacaatactgt-agggaacagggatggataatcccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtaatgcagtccatcgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaagctctcaagaagcctgtgctaagaacagccacggtccaaggaccgagcttggactttgccttatccctcttaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccacgccactcgcaaccaggaaaaactatttgggtggagcacaagttaatcaatgtgctagatgctgttgaattggtagacgagcaaggtgtgaacttggaactcacactagtaactctagacaccaacgaaaagtttagggatgtcaccaagttcattccagagacaatcaccggggcaagcgacgcaaccttggtcattaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatgggtttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccctacgaaggcaggtcagtgtgggggggtagtgacctcagtcggtaagatcattggaatccacattggtgggaacggacgccagggtttctgtgctggactgaagagaggctactttgccagtgaacaaggagagatccagtggatgaagcccaataaagagactgggagactgaacattaatggccccactcgtaccaaattggagcccagtatattccatgatgtgtttgagggtaacaaagaaccagcagtcttaaccagtaaggatcctagactcgaagttgattttgagcaagctttgttttccaagtatgtgggaaacacactgcacgagcctgatgagtacgtgacacaggctgctctccattatgcaaaccagctaaagcaattagacatcaacactagtaagatgagcatggaagaagcgtgctatggcactgaatacttggaggccatagacctgcacactagcgctgggtacccctatagtgccttgggtgttaagaaaagagacatactcgatccaaccactagggatactaccaaaatgaaattctacatggataaatatgggttagacttaccctattccacttatgtgaaagatgagcttagatccttagataagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctatctcaggatgacttttgggcatctctatgagacttttcatgccaacccgggtactgtgaccggatccgcagtggggtgtaatcctgatgtgttctggagcaaactaccgatcctgctgccgggatcgctctttgcatttgattattcagggtatgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtcactaatagaaggaattaaccacacccatcatgtgtatcggaacaagacatattgtgtccttggtggtatgccttcaggatgttccggcacttccatcttcaattccatgattaataacataataatcagaactctcttgattaaaacttttaaggggattgatttagatgagttgaacatggtagcttacggagatgatgtgctagctagctatccattccctattgattgttcggagttagccaaaactggcaaagagtatggactaacaatgacacctgctgacaaatcaccctgctttaacgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaatttccatttcttatccaccccaccatgcccatgagggagattcatgagtccattcgttggactaaggacgcacgtaacactcaggaccacgtgcgctctctgtgccttttagcatggcataatgggaaggaggagtatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaattttgagaacttgagaagaaattggcttgaattgtttt--a--atatacagctt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746662.1_Human_coxsackievirus_A16_isolate_PM-12727-99_complete_genome
------------------ttaaac--aag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gcaacttagaagc------------ttcacactatcac-gaccag-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcatttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaacacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtaacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----ttaatct--------------caagaccattcaa-actcttgagtatatattactccttaa--ctgtaaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggctcaacttaccattggaaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccacacgacctgacgtgtcagtgaacagatttttcacgctagacactaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatctggattttgcgtgcacgtccagtgtaatgcgagtaaattccaccagggcgctttactggtggctgtgctgcctgagtatgtgctcggtactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgcccacatcagtggatcaacctgagaaccaataattgtgcaaccattatagttccatatatgaacacagttccatttgactcagctctcaatcactgcaattttggtctactggtcatcccggtagtaccattggatttcaacgcaggcgccacatctgaaattcccattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggcaccaatcagtttcttactaccgatgatggtgtttctgcaccaattttgccaggtttccacccaactccacctatacacataccaggggaagtacacaacctattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaacgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgagttatgtgctgccttcagagcagaccctggaagagatggtccgtggcagtccacaatattgggccaactttgcaggtactacacccagtggtcaggttcgttggaggtgacattcatgtttgcgggttcattcatggctacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacgcatgtgatctgggacttcggattacagtcttctgtgacgttagtcgtgccatggattagtaacacacactatagggcgcacgcccgtgctgggtacttcgactattacaccaccggcattataaccatatggtatcaaactaactatgtagtacctattggtgctcccactacagcatacatcgtagctttggcagcagcccaggacaacttcaccatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accaaactgt--------------------------gaataatcaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcatcaaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacacaggagacagccattgggaacttctttagccgtgccggtttggttagcattattacaatgcccaccacgggtacaca-aaacacagatggttacgttaactgggacattgatttgatgggatatgctcaactacggcggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacccacttccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttatgatggctatcccaccttcggagagcatctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtaggcaactatagggtggtgaatcggcaccttgccacacacaacgactgggcgaaccttgtgtgggaggacagctctagggacctgttagtctcttctaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggaatatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaggctagtgagtattacccagctagatatcaatcccacctcatgttagctgtgggccactcggaacctggtgactgtggtggcatcctcaggtgccaacacggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgctgatgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtccagggaagtggaggcattgaagaaccatttaattggctcagaaggggctgttgagaagatcttgaagaatttggtgaagctaatttcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagccacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaagaaaagattattccggccgctaaggagaaagttgaattcttaaacaatctgaagcagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctacgcgaccgaagccaaaagagtctatgctctagagaaaaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcattagaggctctccaggaacaggcaagtcacttgccacgggcatcatagctagagctattgctgacaaatatcattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaggtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgccaaatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagattcagatgcgattcgcaggcgattctacatggactgcgatatagaggtgacagactcctataagacggacctcggccgactcgacgcaggtagggccgctaagctttgcacagaaaacaacaccgctaactttaagagatgcagcccactagtgtgtggcaaagctattcaactaagagacaggaagtctaaagtgagatatagcattgatactgtagtgtcagagctaatcagagagtataataataggtctgccattggtaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagaaaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggagattcgacaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggaacgtcaccttaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctacgttatttataaattgttcgctgggtttcagggtgcttattctggtgcgcctaagcaagctctcaagaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatccctcttaaggcgcaacatcagacaggtgcaaaccgatcaaggacatttcactatgttaggggtgcgagatcgcctagccattctgccacgccactcgcaaccaggaaaaactatctgggtggagcacaagttaattaatgtgctagatgctgtcgacttagtagatgagcaaggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggacgttaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttggtcattaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggggtagtcacctcagtcggtaagatcattggaattcacatcggtgggaatggacgccagggtttctgtgctggactgaagagaggctactttgccagtgaacaaggagagatccaatggatgaagtccaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgaaggcaacaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagccttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgccctccactacgcaaatcagctaaagcaattagacattaacactaataagatgggcatggaagaagcatgctatggcactgaatatctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggcgttaagaaaagagacatactcgacccaatcactagagatactaccaaaatgaaattttacatggataaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccttagacaagatcaagaaagggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacttttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccaggatcgctctttgcatttgattattcagggtacgatgcaagtctcagtccagtgtggtttagagctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgatcaataacataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgagttgaatatggtagcttacggagatgatgtgttagctagctatccattccccattgactgctcggagttagccaaaactggtaaagagtatggactgacaatgacacccgctgacaaatcaccctgcttcaacgaagtcacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccattccttattcaccccaccatgcccatgaaggagatccacgagtccattcgttggactaaggacgcacgcaacactcaggatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcctattgggaaagccttggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagttt-------------------------gaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-t--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746661.1_Human_coxsackievirus_A16_isolate_PM-12284-99_complete_genome
---------------------------ag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gcaacttagaagc------------ttcacactatcac-gaccag-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaagcc-tagtagcatcgtgaaagttgcggagtgtttcgctcggca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atccct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattacatattactccttaa--ctgtaaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggctcaacttaccattggaaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaagcccacacgacctgacgtgtcagtgaacagatttttcacgctagacactaaatcctgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcagttccactacctgtaccgatctggattttgcgtgcacgtccagtgtaatgcaagtaaattccaccagggcgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgcccacatcagtggatcaacctgagaaccaataattgtgcaaccattatagttccatatatgaacacagttccatttgactcagctctcaaccactgcaattttggtctactggtcatcccggtagtaccactggatttcaacacaggcgccacatctgaaattcccattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactaccgatgatggtgtttctgcaccaattttgccaggtttccacccaactccacctatacacataccaggggaagtacacaacctattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgagttatgtgctgctttcagagcagaccctggaagagatggtccgtggcagtccacaatattgggccaactctgcaggtactacacccagtggtcaggttcgttggaggtgacattcatgtttgcgggttcattcatggctacaggtaagatgctcatcgcctacaccccacctggggggaatgtgcctgcggacagaatcacagcaatgctaggaacgcatgtgatctgggacttcggattacagtcttctgtgacgttggtcgtgccatggattagtaacacacactatagggcgcacgcccgtgctgggtacttcgactattacaccaccggcattataactatatggtatcaaactaattatgtagtacctattggtgcccccactacagcatacatcgtagctttggcagcagcccaggacaacttcaccatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accaaactgt--------------------------gaataatcaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgccggtttggttagcattattacaatgcccaccacgggtacaca-aaacacagatggttacgttaactgggacattgatttgatgggatatgctcaactacggcggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacccacttccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttatgatggttatcccaccttcggagagcatctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcactagcactagtagagataagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtaggcaactatagggtagtgaatcggcaccttgccacacacaacgactgggcgaaccttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggaatatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtttgatatttgtggaggctagtgagtattacccagctagatatcaatctcacctcatgcttgctgtgggccactcggaacctggtgactgtggtggcatcctcaggtgccaacacggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgctgatgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgattatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtccagggaagtggaggcattgaagaaccatttaattggctcagaaggggctgttgagaagatcttgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcgtggatcaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaacgatatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaagaaaagattattccggccgctaaggagaaagttgaattcttaaataacctgaagcagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtatcatatttagccca---------cttctgccgcaagtttcagccactctacgcgaccgaagccaaaagagtctatgctctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcattagaggctctccaggaacaggcaagtcacttgccacgggcatcatagctagagctattgctgacaaatatcattctagcgtttactcactccctccagacccagaccatttcgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgccaaatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagattcagatgcgattcgcaggcgattctacatggactgcgatatagaggtgacagactcctacaagacggacctcggccgactcgacgcaggtagggccgctaagctttgcacagaaaacaacaccgctaactttaagagatgcagcccactagtgtgtggcaaagctattcaactaagagacaggaagtctaaagtgagatatagcattgatactgtagtgtcagagctaatcagagagtataataataggtctgccattggtaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagaaaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggaacgtcatcttaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttataaattgttcgctgggtttcagggtgcttattctggcgcgcctaagcaagctctcaagaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatccctcttaaggcgcaacatcagacaggtgcaaaccgaccaaggacatttcactatgttaggggtgcgagatcgcctagccgttctgccacgccactcgcaaccaggaaaaactatctgggtggagcacaagttaattaatgtgctagatgctgtcgaattagtagatgagcaaggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggacgttaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttgatcattaacactgagcacatgccctcaatgtttgttccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggggtagtcacctcagtcggtaagatcattggaattcacatcggtgggaatggacgccagggtttctgtgctggactgaagagaggctactttgccagtgaacaaggagagatccaatggatgaagtccaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtatttcatgatgtgtttgaaggcaacaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactacgcaaatcagctaaagcaattagacattaacactaataagatgggcatggaagaagcatgctatggcactgaatacctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagagacatactcgacccaatcactagagataccaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccttagacaagattaagaaagggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacttttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccaggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttctatcttcaattccatgatcaataacataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgagttaaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagttagccaaaactggtaaagagtatggactgacaatgacacccgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgccacattcttaaagagaggcttcctgccagattaccaattcccattccttatccaccccaccatgcccatgaaggagatccacgagtccattcgttggactaaggacgcacgcaacactcaggatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaatttcgagaacttgagaagaaattggctcgaattatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-ta----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746664.1_Human_coxsackievirus_A16_isolate_PM-13998-00_complete_genome
-------------------------------ct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gcaacttagaagc------------ttcacactatcac-gaccag-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattactccttaa--ctgtaaga-----aatggggtcacaagtctccactcaacgatccgggtcacatgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggctcaacttaccattggaaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcccgagtactgcccagacacagatgcaacggcagtcgacaaacccacacgacctgacgtgtcagtgaacagatttttcacgctagacactaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatctggattttgcgtgcacgtccagtgtaatgcaagtaaattccaccagggcgctttgctggtggctgtgctgcctgagtatgtactcggtactatcgcaggagggaccgggaacg------agaattcccatcccccctacgccactacacagcctggtcaggttggtgcagtcctgacacacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgcccacatcagtggatcaacctgagaaccaataattgtgcaaccattatagttccatatatgaacacagttccatttgactcagctctcaaccactgcaattttggtctactggtcatcccggtggtaccattggacttcaacgcaggcgccacatccgagattcccattacagtcactatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggcaccaatcagtttcttactaccgatgatggtgtttctgcaccaattttgccaggtttccacccaactccacctatacacataccaggggaagtacacaacctattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcaggttcattggaggtgacattcatgtttgcgggctcattcatggctacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacgcatgtgatctgggacttcggattacagtcttctgtgacgttggtcgtgccgtggattagtaacacacactatagggcgcacgcccgtgctgggtactttgactattacaccaccggcattataaccatatggtatcaaactaactatgtagtacctattggtgctcccactacagcatacatcgtagctttggcagcagcccaggacaacttcaccatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accaaactgt--------------------------gaataatcaagtgaaccgctccttaactgcattgcaagtgcta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgccggtttggttagcattattacaatgcccaccacgggtacaca-gaacacagatggttacgttaactgggacattgatttgatggggtatgctcaactacggcggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacccacttccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttatgatggttatcccaccttcggagagcatctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagtagggaccgagaagtcaccacactccattaccctgagggtatacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcactagcactagtagagacaaaat---aacaac---------------------------------------attggga------------------------------------------aaatttgggcagcaatcaggtgccatatatgtaggcaactatagggtagtgaatcggcaccttgccacacacaacgactgggcaaatcttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggaatatactattgcaactccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaggctagtgagtattacccagctagatatcaatcccacctcatgcttgctgtgggccactcggaacctggtgactgcggtggcatcctcaggtgccaacacggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgctgatgtcagagatcttctatggctggatgaggaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtccagagaggtggaggcgttgaagaaccatttaattggctcagaaggggctgttgagaagatcttgaagaacttggtgaagctaatctcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggcattcccatagtgcagaaacagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaggagaaagttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtatcatatttagccca---------cttctgccgcaagtttcagccactctacgcgactgaagccaaaagagtctatgctctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcattagaggctctccaggaacaggcaagtcacttgccacgggtatcatagctagagctattgctgacaaatatcattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgccaaatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagattcagatgcgattcgcaggcgattctacatggactgcgatatagaggtgacagactcctacaagacggacctcggccgactcgacgcaggtagggccgctaaactttgcacagaaaacaacaccgctaactttaagagatgcagcccactagtgtgtggcaaagctattcaactaagagacaggaagtccaaagtgagatatagtattgatactgtagtgtcagagctaatcagagagtataataataggtctgccattggtaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagaaaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttataaattgttcgctgggtttcagggtgcttattctggtgcgcctaagcaagctctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagattttgccttatccctcttaaggcgcaacatcagacaggtgcaaaccgatcaaggacactttactatgttaggggtgcgagatcgcctagccattctgccacgccactcgcaaccaggaaaaactatctgggtggagcataagttaattaatgtgctagatgctgtcgaattagtagatgagcaaggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggacgttaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttggtcatcaacaccgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggggtggtcacctcagtcggtaagatcattggaattcacatcggtgggaatggacgccagggtttctgtgctggactgaagagaggctactttgccagtgaacaaggagagatccaatggatgaagtccaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcaacaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactacgcaaatcagctaaagcaattagacattaatactaataagatgggcatggaagaagcatgctatggcactgaatacctggaggccatagacctacacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagagacatactcgacccaatcactagagacactaccaaaatgaaattctacatggataaatatgggttggacttgccctattccacctatgtgaaggatgagcttagatccttagacaagattaagaaagggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacctttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccaggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagattggctactcagaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgattaataacataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgaattaaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagttagccaaaactggtaaagagtatggactgacgatgacacctgctgacaaatcacccttctttaacgaagtcacatgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccattccttatccaccccaccatgcccatgaaggagatccatgagtccattcgttggactaaagacgcacgcaacacccaggatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaatttcgagaacttgagaagaaattggctcgaattatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-ta----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746666.1_Human_coxsackievirus_A16_isolate_PM-15765-00_complete_genome
----------------------------------gtgggttg-t-tcccactcaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gcaacttagaagc------------ttcacactaccac-gaccag-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattactccttaa--ctgtaaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcagggcgccaggatatgtcccaagacccgaagaagtttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgcgtggctcaacttaccattggaaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccacacgacctgacgtgtcagtgaacagatttttcacgctagacactaaatcttgggccaagg------------------attcaaagggatggtattggaagttccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatctggattttgcgtgcacgtccagtgtaatgcaagtaaattccaccagggcgctttactggtagctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcaccctccctacgccactacacagcctggtcaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagtcaattaaccgtgtgcccacatcagtggatcaacctgagaaccaataattgtgcaaccattatagttccatatatgaatacagttccatttgactcagctctcaaccactgcaattttggtctactggtcatcccggtagtaccattggatttcaacgcaggcgccacatccgagattcccattacagtcactatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggcaccaatcagtttcttactaccgatgatggtgtttctgcaccaatattgccaggtttccacccaactccacctatacacataccaggggaagtgcacaacctattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcaggttcgttggaggtgacattcatgtttgcgggctcattcatggctacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggtacgcatgtgatctgggacttcggattacagtcttctgtgacgttggtcgtgccatggattagtaacacacactatagggcgcacgcccgtgctgggtactttgactattacaccaccggcattataaccatatggtatcaaactaactatgtagtacctattggtgcccccactacagcatacatcgtagctttggcagcagcccaggacaacttcaccatgaaactatgcaaggacacagaggatattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accaaactgt--------------------------gaataatcaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgccggtttggttagcattattacaatgcccaccacgggtacaca-gaacacagatggttacgttaactgggacattgatttgatggggtatgctcaactacggcggaaatgcgagttgtttacatatatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtccctcagttactgcagtacatgtatgtcccgccaggggctccgaaacccacttccagagactcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttatgatggttatcccaccttcggagagcatctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagtagggaccgagaagtcaccacactccattaccctgagggtgtacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcactagcactagtagagacaaaat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcagtcaggtgccatatatgtaggcaactatagggtagtgaatcggcaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggaatatactattgcaactccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaggctagtgagtattacccagctagatatcaatcccacctcatgcttgctgtgggccactcagaacctggtgactgcggtggcatcctcaggtgccaacatggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgctgatgtcagagatcttttatggctggatgaggaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtccagagaggtggaggcgttgaagaaccatttaattggctcagaaggggctgttgagaagatcttgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggattaaagtgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagatcattccggccgctaaggagaaagttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctacgcgactgaagccaaaagagtctatgctctagagaaaaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcattagaggctctccaggaacaggcaagtcacttgccacgggcatcatagctagagctattgctgacaaatatcattctagcgtttactcactcccaccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgccaaatggtttctacagtggattttataccacctatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagattcagatgcgattcgcaggcgattctacatggactgcgatatagaggtgacagactcctacaagacggacctcggccgactcgacgcaggtagggccgctaaactttgcacagaaaacaacaccgctaactttaagagatgcagcccactagtgtgtggcaaagctattcaactaagagacaggaagtccaaagtgagatatagtattgatactgtagtgtcagagctaatcagagagtataataataggtctgctattggcaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagaaaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttataaattgttcgctgggtttcagggtgcttattctggtgcgcctaagcaagctctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatccctcttaaggcgcaacatcagacaggtgcaaactgatcagggacacttcactatgttaggggtgcgagatcgcctagccattctgccacgccattcgcaaccaggaaaaactatctgggtggagcacaagttaattaatgtgctagatgctgtcgaattagtagatgagcaaggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggacgttaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttggtcattaacaccgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtataatttccccacaaaggcaggacagtgtggaggggtggtcacctcagtcggtaagatcattggaattcacatcggtgggaatggacgccagggcttctgtgctggactgaagagaggctactttgccagtgaacaaggagagatccaatggatgaagtccaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcaacaaagaaccagcagtcttaactagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactacgcaaatcagctaaagcaattagacattaacactaataagatgggcatggaagaagcatgctatggcactgaatacctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggtattaagaaaagagacatactcgacccaatcactagagacactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccctagacaagattaagaaagggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacctttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccaggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttcttcgtgagattggctactcagaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgatcaataacataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgaattaaatatggtagcttacggagatgatgtgttagctagctatccattccctattgactgttcggagttagccaaaactggtaaagagtatggactgacaatgacacctgctgacaaatcactctgctttaacgaagtcacatgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccattccttatccaccccaccatgcccatgaaggagatccatgagtccattcgttggactaaagacgcacgcaacacccaggatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcctattgggaaagctttggctataccaaatttcgagaacttgagaagaaattggctcgaattatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746667.1_Human_coxsackievirus_A16_isolate_PM-15922-00_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----a-ccc---t---tccc-t-----aagca-gcaacttagaagc------------ttcacactatcac-gaccag-tagcgggcgtggcgcgccagtcacgtctcgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcctat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtccattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattactccttaa--ctgtaaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-aaggttcaaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggctcaacttaccattggaaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccacacgacctgacgtgtcagtgaacagatttttcacgctagacactaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatctggattttgcgtgcacgtccagtgtaatgcaagtaaattccaccagggcgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgcccacatcagtggatcaacctgagaaccaataattgtgcaactattatagttccatatatgaacacagttccatttgactcagctctcaaccactgcaattttggtctactggtcatcccggtagtaccattggatttcaacacaggtgccacatccgagattcccattacagtcactatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggcactaatcagtttcttactaccgatgatggtgtttctgcaccaattttgccaggtttccacccaactccacctatacacataccaggggaagtacacaacctattggaaatatgcagagtagagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttatgctttccagtgtcggtgcagagca------aaacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcaggctcattggaggtgacattcatgtttgcgggctcattcatggctacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaattacagcaatgctaggaacgcatgtgatctgggacttcggattacagtcttctgtgacgttggtcgtgccatggattagtaacacacactatagggcgcacgcccgtgctgggtactttgactattacaccaccggcattataaccatatggtatcaaactaactatgtagtacctattggtgctcccactacagcatacatcgtagctttggcagcagcccaggacaacttcaccatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accaaactgt--------------------------gaataatcaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgaaactagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgccggtttggttagcattattacaatgcccaccacgggtacaca-gaacacagatggttacgttaactgggacattgatttgatggggtatgctcaactacggcggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacccacttccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttatgatggttatcccaccttcggagagcatctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagtagggaccgagaagtcaccacactccattaccctgagggtatacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcactagcactagtagagacaaaat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtaggtaactatagggtagtgaatcggcaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgtaattgtcaaaccggaatatactattgcaactccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccacctcatgcttgctgtgggccactcggaacctggtgactgcggtggcatcctcaggtgccaacacggcgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgctgatgtcagagatcttctatggctggatgaggaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggcttcactgatgcagtgtccagagaggtggaggcgttgaagaatcatttaattggctcagaaggggctgttgagaagatcttgaagaacttggtgaagctaatttcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaggagaaggttgagttcttaaacaacctgaagcagctaccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagttccagccactctacgcgactgaagccaaaagagtctatgctctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcattagaggctctccaggaacaggcaagtcacttgccacgggcatcatagctagagctattgctgacaaatatcattctagcgtttactcactccccccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgccaaatggtttcaacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgttgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagattcagatgcgattcgcaggcgattctacatggactgcgatatagaggtgacagactcctacaagacggacctcggccgactcgacgcaggtagggccgctaaactttgtacagaaaacaacaccgctaactttaagagatgcagcccactagtgtgtggcaaagctattcaactaagagataggaagtccaaagtgagatatagtattgatactgtagtgtcagagctaatcagagagtataacaatagatctgccattggtaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagaaaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttataaattgttcgctgggtttcagggtgcttactctggtgcgcctaagcaagctctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatccctcttaaggcgcaacatcagacaggtgcagaccgatcaaggacacttcactatgttaggggtgcgagatcgcctagccattttgccacgccactcgcaaccaggaaaaactatctgggtagagcacaagttaattaatgtgctagatgctgtcgaattagtagatgagcaaggtgtgaacttggaacttacactagtaactttagacaccaacgaaaagtttagggacgttaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttagtcattaacaccgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggggtggtcacctcagtcggtaagatcattggaattcacatcggtgggaatggacgccagggtttctgtgctggactgaagagaggctactttgccagtgaacaaggagagatccagtggatgaagtccaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcaacaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactacgcaaatcagctaaagcaattagatattaacactaataagatgggcatggaagaagcatgctatggcactgaatacctggaggccatagacctgcacaccagtgccgggtacccctatagtgccttgggtgttaagaaaagagacatactcgacccaatcactagagacactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccctagacaagattaagaaagggaaatcccgtttgattgaggccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacctttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaagctaccgatcctgctgccaggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagattggctactcagaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaactccatgatcaataacataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgaattaaatatggtggcttacggagatgatgtgttagctagctatccattccctattgactgctcggagttagccaaaactggtaaagagtatggactgacaatgacacctgctgacaaatcaccctgctttaacgaagtcacatgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccattccttatccaccccaccatgcccatgaaggaaatccatgagtccattcgttggactaaagacgcacgcaacacccaggatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaatttcgagaacttgagaagaaattggctcgaattatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX839965.1_Human_coxsackievirus_A16_strain_Kor08-CVA16_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacctaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gcaacttagaagc------------ttcacactatcac-gaccag-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atccct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattactccttaa--ctgtaaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaattcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcagggcggcaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggctcaacttaccattggaaactctaccatcacgacgcaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccaaacacagatgcaacggcaatcgacaaacccacacgacctgacgtgtcagtgaacagattcttcacgctagacactaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcaattccactacctgtatcgatctggattttgcgtgcacgtccagtgtaatgcaagtaaattccaccagggcgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagtcctgacgcacccttacgtgctagatgcggggatccctttgagtcaattaactgtgtgtccacatcagtggatcaacctgagaaccaataattgtgcaaccattatagttccatatatgaacacagttccatttgactcagctctcaaccactgcaattttggtttactggtcatcccggtagtaccattggatttcaacgcgggcgccacatccgagattcccattacagtcactatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggcaccaatcagtttcttactaccgatgatggtgtttctgcaccaattttgccaggtttccacccaactccacctatacacataccaggggaagtacacaacctattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcaggttcattggaggtgacattcatgtttgcgggctcattcatggctacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacgcatgtgatctgggacttcggattacagtcttctgtgacgttggttgtgccatggattagtaacacacactatagggcgcacgcccgtgctgggtactttgactattacaccaccggcattataaccatatggtatcaaaccaactatgtagtacctattggtgctcccactacagcatacatcgtagctttggcagcagcccaggacaacttcaccatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accaaactgt--------------------------gaacaatcaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgccggtttggttagcattattacaatgcccaccacgggtacaca-gaacacagatggttacgttaactgggacattgatttgatggggtatgctcaactacggcggaaatgcgagttgtttacctatatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccagttactgcagtacatgtatgtcccgccaggggctccgaaacccacttccagagattcgttcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttatgatggttatcccaccttcggagagcatctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagtagggaccaagaagtcaccacactccattaccctgagggtgtacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcactagcactagtagagacaaaat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtaggcaactatagggtagtgaatcggcaccttgccacacacaacgattgggcaaaccttgtgtgggaggacagctctagggacttgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccgggatatactattgcaactccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaggctagtgagtattacccagctagatatcaatcccacctcatgcttgctgtgggccactcggaacctggtgactgcggtggcattctcaggtgccaacacggtgtaataggaattgtctccactggtggaaatggtcttgtggggtttactgatgtcagagatcttctatggctggatgaggaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtccagagaggtggaggcgttaaagaaccatttaattggctcagaaggggctgttgagaagatcttgaagaacttggtgaagctaatttcagctctagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccctgggcatggatcaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaggagaaagttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctacgcgactgaagccaaaagagtctatgcactagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcattagaggctctccaggaacaggcaagtcacttgccacgggcatcatagctagagctattgctgacaaatatcattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgccaaatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagattcagatgcgattcgcaggcgattctacatggactgcgatatagaggtgacagactcctacaagacggacctcggccgactcgacgcaggtagggccgctaaactttgcacagaaaacaacaccgctaactttaagagatgcagcccactagtgtgtggcaaagctattcagctaagagacaggaagtccaaagtgagatatagtattgatactgtagtgtcagagctaatcagagagtataataataggtctgccattggtaacactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaggaaaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttataaattgttcgctgggtttcaaggtgcttattctggtgcgcctaagcaagctctcaaaaagcccgtgctaagaacagccacggttcaagggccgagcttagattttgccttatccctcttaaggcgcaacatcagacaggtgcaaactgatcaaggacacttcactatgttaggggtgcgagatcgcttagccattctgccacgccattcgcaaccaggagaaactatctgggtggagcacaagttaattaatgtactagatgctgtcgaattagtagatgagcaaggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggacgttaccaagtttattccagagacaatcaccggggcaagtgacgcaaccttggtcattaacactgaacacatgccttcaatgttcgttccagtgggtgacgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggggtggtcacctcagtcggtaagatcattggaattcacatcggtgggaatggacgccagggtttctgtgctggactgaagagaggctactttgccagtgaacaaggagagatccaatggatgaagtccaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtgttccatgatgtgtttgagggcaacaaagaaccagcagtcttaactagtaaggatcccagacttgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactacgcaaaccagctaaagcaattagacattaacactaataagatgggcatggaagaagcatgctatggtactgaatacctggaggccatagacctgcacactagtgctgggtacccctatagtgccttgggtgttaagaaaagagatatactcgacccaatcactagagacactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccctagacaagattaagaaagggaaatcccgcttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacctttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccaggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagattggctactcagaggaggctgtgtcattaatagaagggatcaaccacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgatcaataacataataatcagaactctcttgattaaaactttcaaggggatcgatttagatgaattaaatatggtagcttacggtgatgatgtcttagctagctatccattccctattgactgttcggagttagccaaaactggtaaagagtatggactgacaatgacacctgccgacaaatcaccctgctttaacgaagtcacatgggaaaatgccacgttcttaaagagaggcttcctgccagatcaccaattcccattccttatccaccccaccatgcccatgaaggagatccatgagtccattcgttggactaaagacgcacgcaacacccaggatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaatttcgagaacttgagaagaaattggctcgaattatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaa------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746663.1_Human_coxsackievirus_A16_isolate_PM-13884-97_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gcaacttagaagc------------ttcacacaatcac-gaccag-tagcgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-ttcccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggattgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttgccatatagctattggattggccatccgg--tgaccaacagagccattgtt-----tacctg----tttatt-ggatacgtccctc-----ttaatcc--------------caaggccattcaa-actcttgattatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggctcaacttaccattgggaactctaccatcacgacacaggaagcagccaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccacacgacctgacgtgtcagtgaacagatttttcacgctagacactaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatctggattttgcgtgcacgttcagtgtaatgcaagtaaattccaccagggcgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaatg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagtcctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgcccacatcagtggatcaacctgagaaccaataattgtgcaaccattatagttccatatatgaacacagttccatttgactcagctctcaaccactgcaattttggtctactggttatcccggtagtaccattggatttcaatgcaggcgccacatctgaaattcccattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggcaccaatcagtttctcactactgatgatggtgtttctgcaccaattttgccaggtttccacccaactccacctatacacataccaggggaagtacacaacctattggaaatatgcagagtggagaccatcctggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggccaactctgcagatactacacccagtggtcaggttcattggaggtgacattcatgtttgcgggctcattcatggctacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcagacagaatcacagcaatgctaggaacgcatgtgatctgggacttcggattacagtcttctgtgacgttggtcgtgccatggattagtaacacacactatagggcacacgcccgtgctgggtactttgactattacaccactggcattataaccatatggtatcaaactaactatgtagtacccattggtgctcccactacagcatacattgtagctttggcagcagcccaggataacttcaccatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accagactgt--------------------------gaataatcaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgccggtttggttagcattattacaatgcccaccacgggtacaca-gaacacagatggttacgttaactgggacattgatttgatgggatatgctcaactgcggcggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacgtttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacccacttccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcgccagccagtgcataccaatggttttatgatggttatcccaccttcggagagcatctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagtggggactgagaagtcaccacactccattaccctgagggtatacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccatatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcactagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcagtcaggtgccatatatgtgggcaactatagggtagtgaatcggcaccttgccacacacaacgactgggcaaatcttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggaatatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaggctagtgagtattacccagctagatatcaatcccacctcatgcttgccgtgggccactcggaacctggtgactgtggtggcatcctcaggtgccaacacggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgctgatgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtccagggaagtggaggcattgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggcattcccatagtgcaaaagcagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcaaagggacttgagtggatctctagtaaaatcagcaagttcattgattggcttaaggaaaagattattccggctgctaaggagaaagttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctacgcgactgaagccaaaagagtctatgctctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcattagaggctctccaggaacaggcaagtcacttgctacgggcatcatagctagagctattgctgacaaatatcattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgccaaatggtttctacagtggattttataccacccatggcatcactggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcaaccaatgctagcaacatcgtagttcctacagtttcagattcagatgcgattcgcaggcgattctatatggactgcgatatagaggtgacagactcctacaagacggacctcggccgactcgacgcaggtagggccgctaagctttgcacagaaaacaacaccgctaactttaagagatgcagcccactagtgtgtggcaaagctattcaactaagagacaggaagtctaaagtgagatatagtattgatactgtagtatcagagctaatcagagagtataataataggtctgccattgggaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagaaaagccagccccagatgctatcagcgacctacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggaacgtcaccttaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttataaattgttcgctgggtttcagggtgcttattctggtgcgcctaagcaagctctcaaaaagcccgtgctaagaacagccacggtccaaggaccgagcttagattttgccttatccctcctaaggcgcaacatcagacaggtgcaaaccgatcaaggacatttcactatgttaggggtgcgagatcgcctagccattttgccacgccactcgcaaccaggaaaaactatctgggtggagcacaagttaattaatgtgctggatgctgtcgaattagtagatgagcaaggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggatgttaccaagtttattccagagacaatcaccggggcaagcgatgcaaccttggtcattaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggggtggtcacctcagttggtaagatcattggaattcacatcggtgggaatggacgccagggtttctgcgctggactgaagagaggctactttgccagtgaacaaggagagatccaatggatgaagtccaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcaacaaagaaccagcagtcttaaccagtaaagatcccagactcgaggttgactttgagcaagctttgttttccaagtatgtgggaaacaccctgtacgagcctgacgagtacgtgacacaggctgctctccactacgcaaatcagctaaagcaattagacattaacattaataagatgagcatggaagaagcatgctatggcactgaatacctggaggccatagacctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagagacatactcgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccttagacaagattaagaaagggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctttatgagacttttcatgctaacccggggactgtgaccgggtctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccaggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgatcaataacataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgagttaaatatggtagcttacggagatgatgtgttagctagctatccgttccctattgactgctcggagttagccaaaactggtaaagagtatggactgacaatgacacccgctgacaaatcaccctgctttaacgaagtcacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccattccttatccaccctaccatgcccatgaaggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaatttcgagaacttgagaagaaattggctcgaattatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taac--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746673.1_Human_coxsackievirus_A16_isolate_PM-22159-02_complete_genome
-------------------------------ct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gcaacttagaagc------------ttcacactatcac-gaccag-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagcgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggcaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctattgtc-----tacctg----tttatt-ggatacgtccctc-----ttaatct--------------caaggtcattcaa-actcttgattatatattactccttaa--ttgtgaga-----aatggggtcacaagtctccactcagcgttccgggtcacatgagaactcaaactctgcatcag-aaggctcaaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcaggtcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgaaatggctccaccgctcaagtccccaagcgctgaggcatgtggttatagtgatcgtgtggctcaacttaccattggaaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgataaacccacgcggcctgatgtgtcagtgaacagatttttcacgctagacactaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcagtttcactacctgtatcgatctggattctgcgtgcacgtccagtgtaatgcaagtaaattccaccagggcgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaattctcatcccccctacgccactacacagcctggtcaggttggtgcagtcctgacgcacccttatgtgctagatgcagggatccctttgagccaattaactgtatgccctcatcagtggatcaacctgaggaccaataattgtgcaaccattatagttccatatatgaacacagttccatttgactcagctctcaaccactgcaattttggtctactggtcatcccggtagtaccattggatttcaacgcaggcgccacatccgagattcccattacagtcactatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaagcctggcaccaatcagtttcttactaccgatgatggtgtttctgcaccaattttgccaggattccacccaactccacctatacacataccaggggaagtacacaacttattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgagttatgtgctgcctttagagcagaccccggaagagatggtccgtggcagtccacaatactgggtcaactctgcaggtactacacccagtggtcaggttcattggaagtgacattcatgtttgcgggctcattcatggctacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacgcatgtgatctgggacttcggattacagtcctctgtgacgctggtcgtgccatggattagtaacacacactatagggcgcatgcccgtgctgggtactttgactattacaccaccggcattataaccatatggtatcaaactaactatgtagtgcctattggagctcccactacagcatacatcgtagctttggcagcagcccaggacaacttcaccatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accaaactgt--------------------------gaataatcaagtgaaccgttccttaactgcattgcaagtgcta--------cctacagctgccaacactgaagcaagtagccacagactaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcatcgaatgctagtgacaagaatctcattgagactagatgtgtgttgaatcatcactccacacaggagacagccattgggaatttctttagccgtgccggtttggttagcattattacaatgcccaccacgggtacaca-gaacacagatggttacgttaactgggacatcgatttgatggggtatgctcaactacggcggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacccacttccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagcgcataccagtggttttatgatggttatcccacctttggagaacatctccaagcaaatgacctagattatggtcaatgtccgaataatatgatgggcacttttagcattaggacagtagggaccgagaagtcaccacactccattaccctgagggtatacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgacattaagtgcactagcaccagtagagacaaaat---aacaac---------------------------------------tttggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtaggcaactatagggtagtgaaccggcaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtctcttccactaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggaatatactattgcaactccaaaaggaaacactacccagttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccacctcatgcttgctgtgggccactcggaacctggtgactgcggtggcatcctcaggtgccaacacggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgctgatgtcagagatcttctatggctggatgaggaagcaatggaacaaggagtgtctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtccagagaggtggaggcgttgaagaaccatttaattggctcagaaggggctgttgagaagatcttgaagaatttggtgaagctaatttcagctttagtcatagtcgttaggagtgactatgacatgatcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctccattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggctaatgctgcaaagggactcgagtggatttctagtaagattagcaagttcattgattggcttaaggaaaagattattccggccgctaaggagaaagttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctacgcggctgaagccaagagagtctatgctctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcattagaggctctccaggaacaggcaagtcacttgccacgggcatcatagctagagctattgctgacaaatatcattctagcgtttactcactccccccagacccagaccattttgatggatacaaacaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgccaaatggtttctacagtggattttataccacccatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcatagcatcgaccaatgctagcaacatagtagttcctacagtttcagattcagatgcgattcgcaggcgattctatatggactgcgatatagaagtgacagactcctacaagacggacctcggccgactcgacgcaggtagggccgctaaactttgtacagaaaacaacaccgctaactttaagagatgcagcccactagtgtgtggcaaagccattcaactaagagataggaagtccaaagtgagatatagtattgatactgtagtgtcagagctaatcagagagtataataataggtctgccattggcaacactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagaaaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggtccgacaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttataaactgttcgctgggtttcagggtgcttattctggtgcgcccaagcaagctctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttatccctcttaaggcgcaacatcagacaggtgcaaaccgatcaaggacacttcactatgttaggggtgcgagatcgcctagccattctgccacgtcactcgcaaccaggaaaaactatctgggtggagcacaagttaattaatgtgctggatgctgtcgaattagtagatgagcaaggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggacgttaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttggtcattaacaccgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatggatttctgaaccttagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggggtggtcacctcagtcggtaagatcattggaatccacatcggtgggaatggacgccagggtttctgtgctggactgaagagaggttactttgctagtgaacaaggagagatccaatggatgaagcccaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttaagggcaacaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtaacacaggctgctctccactacgcaaatcagctaaagcaattagacattaacactaataagatgagcatggaagaagcatgctatggcactgaatacctggaggccatagacctgcacaccagtgctgggtacccctatagcgccttgggtgttaagaaaagagacatactcgatccaattactagagacactaccaaaatgaagttctacatggataaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccctagacaagattaagaaagggaaatcccgtttgattgaagccagcagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacctttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccaggatcgctctttgcatttgattattcagggtacgacgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgtgagattggctactcagaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtgggatgccctcaggctgttccggcacttccatcttcaattccatgatcaataacataataatcagaactctcctgattaaaactttcaaggggatcgatttagatgaattgaatatggtagcttacggagatgatgtgttagccagctatccattccctattgactgctcggagttggccaaaactggtaaagagtatggactgacaatgacacctgctgacaaatcaccctgctttaacgaagtcacatgggaaaatgccacattcttgaagagaggcttcctgccagatcaccaattcccattccttatccaccccaccatgcccatgaaggagatccatgagtccattcgctggactaaagacgcacgcaacacccaggatcacgtgcgctctttgtgcctcttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcctattggaaaagccttggctataccaaatttcgagaacttgagaagaaattggctcgaattatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-a-a-aatagca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746675.1_Human_coxsackievirus_A16_isolate_PM-23208-02_complete_genome
-------------------------------ct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gcaacttagaagc------------ttcacactatcac-gaccag-cagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaagcc-tagtagcaccgtgaaagttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgtaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctattgtt-----tacctg----tttgtt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattgctccttaa--ctacaaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaattcaaactctgcatcgg-aaggctcaaccataaattacacaactataaattactacaaggatgcatacgctgcaagtgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggatgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggctcaacttaccattgggaactctaccatcacaacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccacacgacccgacgtgtcagtgaacaggtttttcacgctagacactaaatcctgggctaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatctggattttgcgtgcacgtccagtgtaatgcaagcaaattccaccagggcgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaatg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagtcctgacgcatccttacgtgctagatgcggggatccctttgagccaattaactgtgtgcccacatcagtggatcaacctgaggaccaacaactgtgcaaccattatagtcccatatatgaacacagtcccatttgactcagctctcaaccactgcaactttggtctactggtcatcccggtagtaccattggatttcaacgcaggcgccacgtccgagattcccattacagtcactatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggcaccaatcagtttcttactaccgatgatggtgtttctgcaccaattttgccaggtttccacccaactccacctatacatataccaggggaagtacacaacctattggaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagta------aaacgggcgagttatgcgctgcctttagagcagatcctggaagagatggcccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcaggttcattggaagtgacattcatgtttgcgggctcattcatggctacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacgcacgtgatctgggacttcgggttacagtcttctgtgacgctggtcgtgccatggattagtaacacacactatagggcgcacgcccgtgctgggtactttgactattacactaccggcattataaccatatggtatcaaactaattatgtagtacctattggagctcccactacagcatacattgtggctttggcagcagcccaagacaacttcaccatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accaaactgt--------------------------gaataatcaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtgccagcactacaagccgcggagacaggggcgtcgtcaaatgctagtgacaaaaatctcattgagactagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgccggtttggttagcattattacaatgcccaccacgggtacaca-gaacacagatggttacgttaactgggacattgatttgatggggtatgctcaactacggcggaaatgcgagctgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacccacctccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcctactttcggagaacatctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagttgggaccgagaagtcaccacattccattaccctgagggtatacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcactagcactagtagagacaaaat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtaggcaattatagggtagtgaaccgacaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgtaattgtcaaaccggaatatactattgtaactccaaaaggaaacactacccagttagtttcaccaagcccagtctggtatttgtggaagctagtgagtactacccagctagataccaatcccacctcatgcttgccgtgggccactcggaacctggtgactgcggtggcatcctcaggtgccaacacggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgctgatgtcagagatcttctatggctggatgaggaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtacgggtttcactgatgcagtgtccagagaggtggaggcgttgaagaaccatttaattggctcagaaggggctgttgagaagatcttgaagaacttggtgaaactaatctcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggctagcgctgcaaagggactcgagtggatttctagtaaaatcagcaagttcattgattggcttaaagaaaagatcatcccggccgctaaggagaaagttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtccgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------tttctgccgcaagtttcagccactctacgcgactgaagccaaaagagtctatactctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcattagaggctctccaggaacaggcaaatcacttgccacgggcatcatagctagagctattgctgacaaatatcattctagcgtttactcactccccccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgccaaatggtttctacagtggattttataccacctatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagattcagatgcgattcgcaggcggttctacatggactgcgatatagaggtgacagactcctacaagacggacctcggtcgactcgacgcaggtagggccgctaaactttgcacagaaaacaacaccgctaactttaagagatgcagcccactagtgtgtggtaaagctattcaactaagagataggaagtccaaagtgagatatagtattgatactgtagtgtcagagctaatcagagagtataataataggtctgcaattggtaacactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagaaaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccggccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttataaattgttcgctgggtttcagggcgcttattctggtgcgcccaagcaagctctcaagaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgctttatccctcttaaggcgcaacatcagacaggtgcaaaccgatcaaggacacttcactatgttaggggtgcgagatcgcctagccattctgccacgccactcgcaaccaggaaaaactatctgggtggagcacaagttaattaatgtgctagatgctgtcgaattagtagatgagcaaggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggacgttaccaagtttattccagagacaatcaccggggcaagcgacgctaccttggtcattaacaccgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatggatttttgaatcttagcggtaagcccacacaccgaaccatgatgtacaacttccccacaaaggcaggacagtgtggaggggtggtcacctcagtcggtaagatcattggaattcacatcggtgggaatggacgccagggattctgtgctggactgaagagaggctactttgccagtgaacaaggagagatccaatgggtgaagtccaataaagagactgggagactgaacatcaatggcccgacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcaacaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactacgcaaatcagctaaagcaattagacattaacactaataagatgagcatggaagaagcatgctatggcactgaatacctggaggccatagatctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagagacatactcgacccagtcactagagacactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccctagacaagattaagaaagggaaatcccgtttgattgaagccagcagcctaaatgactcagtttaccttaggatgacttttgggcatctctatgagacctttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgctgccaggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagattggctactcagaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgattaacaacataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgagttgaatatggtagcttacggagatgatgtgttagccagctatccattccctattgactgctcggagttagccaaaactggtaaagagtatggactgacaatgacacctgctgacaaatcaccctgctttaacgaagtcacatgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccattccttatccaccccactatgcccatgaaggagatccatgagtccattcgctggactaaagatgcacgcaacacccaagatcacgtgcgctctttgtgcctcttagcatggcacaatgggaaggaggaatatgaaaattttgtgagtacaattagatcagttcctattgggaaagccttggctataccaaatttcgagaacttgagaagaaattggctcgaattatttt--a--acatacagttt-------------------------aaaa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746665.1_Human_coxsackievirus_A16_isolate_PM-14660-97_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgttagcacactgattctgcgggacctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gcaacttagaagc------------ttcacacgatcac-gaccaa-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-ttcccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtccaacagagctattgtc-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattgttccttaa--ctgcaaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgcgtggctcaactcaccattgggaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccacacgacctgacgtgtcagtgaacagatttttcacgctagacactaaatcttgggctaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgtaatgcaagtaaattccaccagggcgctttactggtggctgtactgcctgagtatgtgctcggtactatcgcaggagggaccgggaatg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcggttctgactcacccttacgtgttagatgcagggatccctttgagccaattaactgtgtgcccacatcagtggatcaacttaagaaccaataattgtgcaaccatcatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaattttggtctactggtcatcccggtagtaccattggatttcaatgcaggcgccacatctgaaattcccattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactactgatgatggtgtttctgcaccaattttgccaggtttccacccaactccacctatacacataccaggggaagtacacaacctattggaaatatgcagagtggagaccatcctggaagttaacaa----------cttaaagaccaacgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgaattatgtgctgcctttagggcagaccctgggagagatggcccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcaggttctttggaggtgacattcatgtttgcgggctcattcatggccacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggatagaatcacagcaatgctaggaacacatgtgatctgggacttcgggttgcagtcttctgtaacgttggtcgtgccatggattagtaacacacactatagggcacacgcccgtgctgggtactttgactattacaccactggcatcataaccatatggtatcaaaccaactatgtagtacccattggtgctcccactacagcatacatcgtagctttggcagcagcccaggacaacttcaccatgaaattatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accagactgt--------------------------gaacaatcaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagactaggtgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgccggtttggtcagcattatcacaatgcccaccacgggtacaca-gaacacagatggttacgttaattgggacattgatttgatgggatatgctcaactacggcggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctcgtcccccaattactacagtacatgtatgtcccgccaggagctccgaaacccacttctagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttatgatggttatcccaccttcggagagcatctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaactataaaggaaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggcgccatatatgtaggcaactatagggtagtgaatcggcaccttgccacacacaacgactgggcaaatcttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccgggatatactattgcaactctaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaagctagtgagtattacccagctagatatcaatcccacctcatgcttgctgtgggccactcggaacctggtgactgtggtggcatcctcaggtgccaacacggtgtagtaggaattgtctccactggtggaaatggccttgtggggtttgctgatgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgctgtgtccagggaagtagaggcattgaagaaccatttgattggctcagaaggagctgttgagaagatcttgaagaacttggtgaagttaatctcagctttagtcatagtcgtcaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcaaaggggcttgagtggatttctagcaaaatcagcaagttcattgattggcttaaggaaaagattattccggccgctaaggagaaagttgaattcttgaacaacctaaagcagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgtaagtttcagccactctacgcgactgaagccaagagagtctatgctctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcattagaggctctccaggaacaggcaagtcacttgctacgggcatcatagctagagctattgctgacaagtaccattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgccaaatggtttctacagtggattttataccacccatggcatcactggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaaccaatgctagtaatatcgtagttcctacagtttcagattcagatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggacctcggccgactcgacgcaggtagggccgctaagctttgcacagaaaacaacaccgctaactttaagagatgcagcccactagtgtgtggtaaagctattcaactaagagacaggaagtctaaagtgagatatagtattgatactgtagtgtcagagctaatcagagagtataataataggtctgccatcgggaataccatagaagccctcttccaaggaccccctaagtttaagcctataagaatt---agccttgaagaaaagccagccccagatgccatcagcgacctacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccattgccaccgtggttgcagttgtgtctcttgtctatgttatctataaattgtttgctgggtttcagggtgcttattctggtgcgcctaagcaagctctcaaaaagcccgtgctaagaacagctacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaaccgatcaaggacattttactatgttaggggtgcgagatcgcctagccattttgccacgccactcgcagccaggaaaaactatctgggtggagcacaagttaattaatgtgctggatgctgtcgaattagtagatgagcaaggtgtgaacttggaactcacattagtaaccttagacaccaacgaaaagtttagggatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgtcccagtgggtgatgttgtacaatatgggtttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggggtggtcacctcagtcggcaagatcattggaattcacatcggcgggaatggacgccagggcttctgcgctggactgaagagaggctactttgccagtgagcaaggagagatccaatggatgaagtccaataaagagactgggagactgaacattaatggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcaacaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctacacgagcctgacgagtacgtgacacaggctgctctccactacgcaaatcagctaaagcaactagacataaacattaataagatgagcttggaagaagcatgctatggcactgaatacctggaggccatagacctgcacaccagtgccggatacccctatagtgccttgggtgttaagaaaagagacatactcgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccttagacaagattaagaaagggaaatcccgtttgattgaagccagtagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgaaacttttcatgccaacccggggactgtgaccgggtctgcagtagggtgcaatcccgatgtgttctggagcaaactaccgatcctgctgccaggatcgctctttgcatttgattattcagggtatgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgagagatcggctactcagaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatcttcaattccatgatcaataacataataatcagaactctcttgattaaaactttcaaggggatcgatttagatgagttgaatatggtagcttatggagatgatgtgttagctagctatccgttccctattgactgctcggagttagccaaaactggtaaagagtatggactgacaatgacacccgctgacaaatcaccctgctttaacgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagaccaccaattcccattccttatccaccctaccatgcccatgaaggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaggaatacgaaaaatttgtgagtacaattagatcagttcctattggaaaagccttggctataccaaatttcgagaacttgagaagaaattggctcgaattatttt--a--aaatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taac--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746669.1_Human_coxsackievirus_A16_isolate_PM-16809-98_complete_genome
--------------------------------t-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgttagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gtaacttagaagc------------ttcacacaatcac-gaccag-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtccaacagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggctattcaa-actcttgattatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccactcagcggtccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaactacacaactataaactactacaaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgcgtggctcaactcaccattgggaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccacacgacctgacgtgtcagtgaacagatttttcacgctagacactaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgtattgacagaagtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgtaatgcaagtaaattccaccagggcgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaatg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttatgtgctagatgcagggatccctttgagccaattaactgtgtgcccacatcagtggatcaacttaagaaccaataattgtgcaaccatcatagttccatacatgaacacagttccttttgactcagctctcaaccactgcaattttggtctactagtcatcccggtggtaccattagatttcaatgcaggcgccacatctgaaattcccattacagtcaccatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactactgatgatggtgtttctgcaccaattttgccaggcttccacccaactccacctatacacataccaggggaagtacacaacctattggagatatgcagagtggagactatcctggaagttaacaa----------tctaaagaccaacgagactaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgaattatgtgctgcctttagagcagaccctgggagagatggcccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcaggttcattggaggtgacattcatgtttgcgggctcattcatggccacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggatagaatcacagcaatgctaggaacgcatgtgatctgggacttcggattacagtcttctgtaacgttggtcgtgccatggattagtaacacacactatagggcacacgcccgtgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtagtacccattggtgcccccactacagcatacatcgtagctttggcagcagcccaggacaacttcaccatgaaattatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---atcagactgt--------------------------gaacaatcaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtcaaatgctagtgataagaatctcattgagactaggtgtgtattgaaccatcattccacacaggagacagccattgggaatttcttcagccgtgccggtttggtcagcgttatcacaatgcccaccacgggtacaca-gaacacagatggctacgttaattgggacattgatttgatgggatatgctcaactacggcggaaatgcgaattgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctcgtcccccaattactacaatacatgtatgtcccgccaggggctccgaaacccacttccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagcccaagtgtcagtccccttcatgtcaccagccagtgcatatcaatggttttatgatggttatcccaccttcggagagcatctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagtggggactgagaagtcaccacactccattaccctgagggtatacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaaccaaccttatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtaggcaactatagggtagtgaatcggcaccttgccacacacaacgactgggcaaatcttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaagggtgcgacactatcgctagatgcaattgtcaaaccgggatatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaagctagtgagtattacccagctagatatcaatcccacctcatgcttgctgtgggccactcggaacctggtgactgtggtggcatcctcaggtgccaacacggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgctgatgtcagagaccttctatggttggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtccagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaagatcttgaagaacttggtgaaactaatctcagctttagtcatagtcgttaggagtgactacgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggccaacgctgcaaaggggcttgagtggatttctagcaaaatcagcaagttcattgattggcttaaagaaaagattattccggccgctaaggagaaagttgaattcttaaacaatctaaagcagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcacaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctacgcgactgaagccaaaagagtctatgctctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcatcagaggctctccaggaacaggtaagtcacttgctacgggcatcatagctagagctattgctgacaaataccattccagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgccaaatggtttccacagtggattttataccacccatggcatcactggaagagaaaggagtgtctttcacctctaagttcgtcgttgcgtcaaccaatgctagtaatatcgtagttcctacagtttcagattcagatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggacctcggccgactcgacgcaggtagggccgctaagctttgcacagaaaacaacaccgctaactttaagagatgcagcccactagtgtgtggcaaagctattcaactaagagacaggaagtctaaagtgagatatagtatcgatactgtagtgtcagagctaatcagagagtataataataggtctgccatcgggaacaccatagaagccctcttccaaggaccccctaagtttaagcctataagaatt---agccttgaagaaaagccagccccagatgccatcagtgacctacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatctataaattgtttgctgggttccagggtgcttattctggtgcgcctaagcaagctctcaaaaagcccgtgctaagaacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaaccgatcaaggacatttcactatgttgggggtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatctgggtggagcacaagttaattaatgtgctggatgctgttgaattagtagatgagcaaggtgtgaacttggaactcacattagtaaccttagacaccaacgaaaagtttagggatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatgggtttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggggtggtcacctcagtcggtaagatcattggaattcacatcggcgggaatggacgccagggtttctgtgctggactgaagagaggctactttgccagtgagcaaggagagatccaatggatgaagtccaataaagagactgggagactgaacgttaatggcccaacccgtaccaaattggagcccagtgtattccatgatgtgtttgagggcaataaggaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagccttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactacgcaaatcagctaaagcaactagacataaatattaataagatgagcttggaagaagcatgctatggcactaaatacctggaggccatagacctgcacaccagtgccgggtacccctacagtgccttgggtgttaagaaaagagacatactcgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccttagacaagattaagaaagggaaatcccgtttgattgaagccagtagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgagacttttcatgccaacccggggactgtgaccgggtctgcagtagggtgcaatcctgatgtgttttggagcaagctaccgatcctgctgccaggatcgctctttgcatttgattattcagggtatgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgagagatcggctactcagaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaataagacatattgtgtccttggtggaatgccctcaggctgttccggcacttccatctttaattccatgattaataacataataatcagaactctcttgattaaaactttcaaggggattgatttagatgagttaaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagttagccaaaactggtaaagagtatggactgacaatgacacccgctgacaaatcaccctgctttaacgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccattccttatccaccctaccatgcccatgaaggagatccacgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcctattggaagagccttggctataccaaatttcgagaatttgagaagaaattggctcgaattatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-t-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746671.1_Human_coxsackievirus_A16_isolate_PM-1791021-07_complete_genome
------------------ttaaac--aag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gcaacttagaagc------------ttcacactatcac-gaccag-cagtgggcgtgacgcaccagtcacgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcatgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggaaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgtaccctcaaccca-gaggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc-ttttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccag--tgaccaacagagctattgtt-----tacctg----tttatt-ggatacgtccctc-----ttaatct--------------caagaccatccaa-actcttgattatatattactccttaa--tcataaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaattcaaactctgcatcgg-aaggctcaaccataaattacacaacaataaactactacaaggatgcatacgctgcaagtgcagggcgccaggatatgtcccaggacccgaagaaatttaccgaccctgtcatggatgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggctcaacttaccattgggaactctaccatcacgacacaagaagcagctaacatagttatagcctatggggagtggcctgagtattgcccagacacagatgcgacggcagtcgacaaacccacacgacccgacgtgtcagtgaacagatttttcacactagatactaagtcttgggctaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcagaacgctcagttccactacctgtatcgatctggattttgcgtgcacgtccagtgtaatgcaagtaaattccaccagggcgctttactggtagctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaacg------agaactctcatcctccctacgccactacacagcctggtcaggttggtgcagtcctgacacatccttacgtgttggatgcagggatccctttgagtcaattaactgtgtgcccgcatcagtggatcaacctgagaaccaataattgtgcaaccattatagtcccatatatgaacacagtcccatttgattcagctctcaaccactgcaactttggtctactggtcatcccggtagtaccattggatttcaacgcaggcgccacgtccgagattcccattacagtcactatagctcccatgtgcgcggaatttgcgggtttgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggcaccaatcaatttcttactaccgatgatggtgtttctgcaccaattttgccaggtttccacccaactccacctatacacataccaggggaagtacacaacctattagaaatatgcagagtggagaccatcttggaggttaacaa----------cctgaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgagctatgcgctgcctttagagcggatcctggaagagatggtccgtggcagtccacaatactgggccaactctgtaggtattacacccagtggtcaggttcattggaagtgacattcatgtttgcgggctcattcatggctacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacgcacgtgatctgggacttcgggttacagtcttctgtgacgctggtcgtgccatggattagtaatacacactatagggcgcacgcccgtgctggatactttgactattacactaccggcattataaccatatggtatcaaactaattatgtagtacctattggagctcccactacagcatacattgtggctttggcggcagcccaggacaacttcaccatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accaaactgt--------------------------gaataatcaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtgccagcactacaagccgcggagacaggggcgtcgtcaaatgctagtgacaaaaatctcattgagactagatgtgtattgaaccatcactccacacaggagacagccattgggaatttctttagccgtgccggtttggttagcattatcacaatgcccaccacgggtacaca-gaacacagatggttacgttaactgggacattgatttgatggggtatgctcaactacggcggaagtgcgagttgtttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattgctgcagtacatgtatgtcccgccaggggctccgaaacccacctccagagattcattcgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccactttcggagaacatctccaagcaaatgacctagattatggtcagtgcccgaataatatgatgggcacttttagcattaggacagttgggaccgagaagtcaccacactccattaccctaagggtatacatgaggattaaacacgtcagggcgtggatcccaaggcctctgagaaatcaaccttatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcactagcactagtagagacaaaat---aacaac---------------------------------------attggga------------------------------------------aagtttggacagcaatcaggtgccatatatgtaggcaattacagggtagtgaaccggcaccttgccacacacaacgactgggcaaaccttgtgtgggaggatagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggaatatactattgcaactctaaaaggaagcactacccagttagtttcaccaagcctagtttggtatttgtggaggctagtgagtattacccggctagataccaatcccacctcatgcttgccgtgggccactcggaacctggtgactgcggtggcatcctcaggtgccaacacggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgctgatgtcagagatcttctatggctggatgaggaagcaatggaacaaggagtatctgactatatcaag-ggcctcggtgatgcttttggtgtgggtttcactgatgcagtgtccagagaggtggaggcattgaaaaaccatttaattggctcagaaggggctgttgagaagatcttgaagaacttggtgaaattaatctcagctttagtcatagtcgtcaggagtgactatgacatggtcaccctcacagctacgcttgccttgatcgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgacatggccagcgctgcaaagggactcgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagatcatcccagccgctaaggagaaagttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcaaccactctacgcgactgaagccaaaagagtctacactctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctgatcattagaggctctccaggaacaggcaagtcacttgccacaggcatcatagccagagctattgctgacaaatatcattctagcgtttactcacttcccccagacccagaccattttgatgggtacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgccaaatggtctctacagtggattttataccaccaatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcgttgcatcgaccaatgctagcaacatagtagttcctacagtttcagattcagatgcgattcgcaggcgattctatatggactgcgatatagaggtgacagactcctacaagacagacctcggccgactcgacgcaggtagggccgctaaactttgcacagaaaacaacaccgctaactttaagagatgcagcccactagtgtgcggtaaagctattcaactaagagataggaagtccaaagtgagatatagtattgatactgtagtatcagagctaatcagagagtataataataggtctgcaattggtaacactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagaaaaaccagccccagatgccattagcgacctacttgctagtgtggatagcgaagaggttcgacaatactgt-agggaacaggggtggataattccggaaacaccggccaacgtggaacgccacctcaacagagcggtgttggtgatgcagtccatcgccaccgtggtcgcagttgtgtctcttgtctatgtcatctataaattgttcgctgggtttcagggcgcttattctggtgcgcccaagcaagttctcaagaagcccgtgctaagaacagccacggttcaaggaccgagcttagattttgccttatccctcttaaggcgcaacatcagacaggtgcaaactgatcaaggacacttcactatgttaggggtgcgagatcgcctagccattctgccacgccactcgcaaccaggaaaaactatctgggtggagcacaagttaattgatgtgctagatgctgtcgaattagtagatgagcaaggtgtgaacttggaactcacactagtgactttagacaccaacgaaaagtttagggacgttaccaagtttattccagaaacaatcaccggggcaagcgacgcaaccttggttattaacaccgagcacatgccctcaatgttcgttccagtgggtgatgttgtgcaatatggatttttgaatcttagcggcaagcccacacaccgaaccatgatgtacaacttccccacaaaggcaggacagtgtgggggggtggtcacctcagtcggcaagatcattggaattcacatcggtgggaatggacgccagggattctgtgctgggctgaagagaggctactttgccagtgaacaaggagagatccaatgggtgaagcccaacaaagagactgggagactgaacattaatggcccgacccataccaaattggagcccagtgtgttccacgatgtgtttgaaggcagcaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgtttgccaagtatgtgggaaacaccctgcacgagcctgatgagtacgtgatacaggctgctctccactacgcaaatcagctaaagcaattagacatcaacactaataagatgagcatggaggaagcatgctatggcactgaatacctggaggctatagatctgcacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagagacatactcgacccagtcactagagacactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaagatgagcttagatccctagacaagattaagaaagggaaatcccgtttgattgaagccagtagcctgaatgactcagtttaccttaggatgacttttgggcatctctatgagacctttcatgccaacccggggactgtgaccggatctgcagtagggtgtaatcctgatgtgttctggagcaaactaccgatcctgctgccaggatcgctctttgcatttgattattcagggtatgatgcaagtctcagcccagtgtggtttagagctttagagatggttctccgtgagattggctactcagaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccttcaggctgttccggtacttccatcttcaattccatgatcaataacataataattagaactctcttgattaaaacttttaagggggtcgatttagatgagttgaatatggtagcttacggagatgatgtgctagctagttatccattccctattgactgctcggagttagccaaaactggtaaagagtatggactgacaatgacacctgctgacaaatcactctgctttaacgaagtcacatgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccttttcttatccaccccaccatgcccatgaaggagatccatgagtccattcgttggaccaaagatgcacgcaacacccaggaccacgtgcgctctttgtgcctcttagcatggcacaatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcctattgggaaagctttggctataccaaatttcgagaacttgagaagaaattggctcgaattatttt--a--acttacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taac--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC695830.1_Human_coxsackievirus_A16_strain_MAV_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----a-ccc---t---cccc-t-----aagca-gtaacttagaagc------------ttcacacaatcac-gaccaa-tagtaggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-ttcccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagcgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tactggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctatagtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttaattatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactataaggatgcatacgctgcaagtgcggggcgccaggatatgtctcaagacccaaagaaatttaccgaccctgttatggacgtcatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggctatagtgatcgtgtggctcagcttaccattgggaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaagcctacacgacctgacgtgtcagtgaacagatttttcacgctagacactaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtctttggtcagaatgctcagttccactacctgtatcgatccgggttttgcgtgcacgttcagtgtaatgcaagtaaattccaccagggcgctttactggtggctgtgctgcccgagtatgtactcggcactatcgcaggagggaccgggaatg------aaaattctcatcctccctacgccattacgcagcctggtcaggtcggtgcagttctgacgcatccttacgtgctagatgcagggatccctttgagccaattgacagtgtgcccacatcagtggattaacttaagaaccaacaattgtgcaaccatcatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggtctactggtcgtcccggtagtaccactggatttcaatgcaggcgccacatctgaaattcccattacagtcaccatagctcccatgtgtgcggaatttgcaggcctgcgccaggcagtaaagcaaggtataccaacagagctcaaacctggtactaatcagttcctcactactgatgatggtgtttctgcaccaattttgccaggttttcacccaacccctcctatacacataccaggggaagtacacaacctattggaaatatgcagagtggagactatcctggaagttaacaa----------cttaaagactaatgagaccaccccc------atgcagcgtttgtgctttccagtgtcggtgcagagta------aaacaggcgaattatgtgctgcctttagagcagaccccggaagagatggtccgtggcagtccacaatactgggccagctctgcaggtactatacccagtggtcaggttcattggaggtgacattcatgtttgcaggctcatttatggctacaggcaagatgctcattgcctacaccccacctggggggaatgtgcccgcggacagaatcacagcaatgctaggaacacatgtgatttgggacttcgggttacagtcttctgtgacgttggtcgtgccatggattagtaacacacactatagggcacacgctcgtgctgggcactttgactattacaccactggcattataaccatatggtatcaaactaactatgtagtacccattggtgcccctactacagcatacatcgtagctttggcagcagcccaggacaacttcaccatgaagctatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accagactgt--------------------------gaataaccaagtgaaccgctccttaaccgcattgcaagtatta--------cctacagctgccaatactgaagcaagtagccacagattaggcactggagttgtaccggcactacaagccgcggagacaggggcatcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaatcatcactccacacaggagacagccattggaaatttctttagccgtgccggcttggtcagcattattacaatgcccaccacgggtacaca-ggacacagatggctacgttaattgggacattgatttgatgggatatgctcaactacggcggaaatgcgagctgtttacctacatgcgctttgatgctgaattcacattcgtcgtagccaagcccaatggtgagctagtcccccaattactgcagtacatgtacgttccgccaggggctccgaaacccacttccagagattcattcgcttggcagactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcgccagccagtgcataccaatggttttatgatggttatcccaccttcggaaagcatctccaagcagatgacctagattatggtcaatgcccgaacaatatgatgggcacttttagcattaggacagtagggactaaaaagtcaccacactccatcgccctaagggtatacatgaggattaaacatgtcagggcatggattccaaggcctctgagaaatcagccttacttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtgggcaactatagggtggtgaatcggcaccttgccacacacaacgattgggcaaatcttgtgtgggaggacagctctagggacctgttagtctcttccaccactgcccaggggtgcgacaccatcgctagatgcaattgtcaaaccggagtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtcgaagctagtgagtattacccagccagatatcaatcccatctcatgcttgctgtaggtcactcggaacctggtgactgtggtggcatccttagatgccaacacggtgtagtaggaattgtctccactggtggaaatggtcttgtggggttcgctgatgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatccgactacatcaaa-ggcctcggtgatgcttttggtgtgggtttcactgatgcagtgtccagggaagtagaaacattgaagaaccatttaattggttcggaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcagctttagtcattgtcgttaggagtgactatgacatagtcaccctcacagccacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctactcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcaaaagggcttgagtggatttctagcaaaatcagcaagttcattgattggcttaaggaaaaaattattccggccgctaaggagaaagttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatctcaaaccttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttggccca---------cttctgccgcaagtttcagccactctacgcgactgaagccaaaagagtctacgctctagaaagaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcattagaggctccccaggaacaggcaagtcacttgctacaggcatcatagctagagctattgctgacaagtaccattctagcgtttactcacttcctccagacccagaccattttgatggatacaagcaacaagtagttactgttatggatgatctctgtcaaaacccagatggaaaggacatgtctctattttgtcaaatggtttctacagtggattttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaaccaatgctagtaacatcgtagttcctacagtttcagattcagatgcgattcgcaggcggttttatatggactgcgatatagaggtgacggactcctacaaaacggacctcggccgactcgatgcaggtagggccgctaagctttgcacagaaaataacaccgctaactttaagagatgcagcccactagtgtgtggcaaagctatccaactgagagacaggaagtctaaagtgagatatagtgttgacactgtagtgtcagagctaatcagagaatataataataggtccgccatcgggaacaccatagaagccctcttccaaggaccccttaagttcaagcctataagaatt---agccttgaagaaaagccagccccggatgccattagcgacctacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccgaccaatgtggaacgtcacctcaacagagcagtgttggttatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgtcatttataaattgtttgctgggtttcagggtgcctattctggtgcgcccaagcaagccctcaagaaacccgtactaagaacagccacagttcaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaaccgaccaaggacacttcactatgttaggggtgcgagatcgcctagccattttgccacgccactcgcaaccaggaaaaactatctgggtggagcacaagttaattaatgtactggatgctgtcgaattagtggatgagcaaggtgtaaacttggaactcacactagtaaccttagacaccaacgaaaagtttagggacgtcaccaagtttattccagagacaatcaccggggcgggtgacgcaaccttgatcatcaacactgagcacatgccctcaatgttcgttccagtgggtgacgttgtacaatatggatttctgaatctcagcggtaagcccacgcaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggagtggtcacttcagtcggtaagatcataggaattcacattggtgggaatggacgccagggtttctgcgctggattgaagagaagctattttgccagtgaacagggagagatccaatggatgaagtccaataaagagactgggagactgaacattaatggtccaacccgtaccaaactggagcccagtgtgtttcatgatgtgtttgagggcgacaaggaaccagcagtcttaaccagtaaggatcccagacttgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgatgagtatgtggcacaggctgctctccactatgcaaatcagctaaagcaattagacataaacactaataagatgagcatggaagaagcatgttatggcactgaatatctggaggctatagacctgcacactagcgccgggtatccttatagtgccttgggtgttaagaaaagagacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaggatgagctcagatccttagacaagattaggaaagggaaatcccgtttgattgaagccagtagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgaaactttccatgccaacccggggactgtgactgggtctgcagtagggtgcaatcctgatgtgttctggagtaaactaccaatcctgctgccgggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgagagatcggctactcagaggaggctgtgtcattaatagaaggaatcaaccacacccatcatgtgtatcggaacaagacatattgtgtcctcggtggaatgccctcaggctgttccggcacttccatcttcaattccatgatcaacaacataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgagttaaatatggtagcttatggagatgatgtgctagctagctacccgttccctattgactgctcggagttagctaaaactggtaaagagtatggactgacaatgacacccgctgacaagtcaccctgttttaatgaagttacctgggaaaacgccacattcttaaagagaggtttcctgccagatcaccaattcccgttccttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgtaacactcaggatcacgtgcgttctttgtgccttttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaatcagatcagttcctattggaaaagctttggctataccaaattttgagaacttgagacggaattggcttgaattatttt--a--atatacagttt-------------------------aaaa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaa------------------------------------------------------------------------------------------------------------------------------------------
>AY790926.1_Human_coxsackievirus_A16_strain_shzh00-1_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gtaacttagaagc------------tttgcacaatcac-gaccag-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggtcattcag-actcttgattatatattgctccttaa--ctgtaaga-----aatggggtcacaagtttccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaggatgcatatgctgcaagtgcggggcgtcaagatatgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccactcaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccacacgacctgacgtgtcagtgaacagatttttcacgctagatactaaatcttgggccaagg------------------attccaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcagttccactatctgtatcgatctgggttttgcgtgcacgttcagtgtaatgcaagtaaatttcaccaaggcgctttgctggtggctgtgctgcccgagtatgtactcggcactatcgcaggagggaccgggagtg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaaccaataattgtgcaactattatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtagtaccattggatttcaatgcaggcgccacatctgaaattcccattacagtcaccatagctcccatgtgcgcggaatttgcgggtctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggtaccaatcagtttcttactactgatgatggtgtttctgcaccaattctgccaggtttccatccaactccacctatacacataccaggggaagtgcacaatctattggaaatatgcagagtggagaccatcctggaagttaacaa----------cctaaagaccaatgaaaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgaattatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggtcaactctgcaggtactacacccagtggtcaggttcattggaggtgacattcatgtttgcaggctcattcatggctacaggtaagatgctcatcgcctacactccacctgggggaaacgtgcctgcggacagaatcacagcaatgttaggaacgcatgtgatctgggacttcgggttacagtcttctgtgacgctggtcgtgccatggattagtaatacacactacagggcacacgcccgtgctgggtactttgattattacaccactggcatcataaccatatggtatcaaactaactacgtagtacccattggtgctcccactacagcatacatcgtggctttggcagcagcccaggacaacttcactatgaaactatgcaaggacacagaggacattgagcaaacggctaatatacaaggggatcct--------attgcagacatgattg---accagactgt--------------------------gaacaatcaagtgaaccgctccttgactgcattgcaagtacta--------cctacagctgccaacactgaggcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacacaggagacagccattgggaacttctttagccgtgccggtttggtcagcatcattacaatgcccaccacgggtacaca-gaacacagatggttatgttaattgggacattgatttgatgggatatgctcagctgcggcggaaatgcgagttgtttacctatatgcgctttgacgctgagttcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtccccccaggggctccgaaacccacttccagagattcgtttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagccagtgcgtaccaatggttttatgatggttatcccaccttcggagagcatctccaagcaaatgacctagattatggtcaatgtccgaataatatgatgggcacttttagcattaggacagtagggattgaaaagtcaccacactccattaccctgagggtatacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctatttatttaagaccaacccaaattataaagggaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttggacagcaatcaggtgccatatatgtgggcaactatagggtagtgaatcggcaccttgccacacacaacgattgggcaaatcttgtgtgggaggacagctctagggacctgttagtctcttccaccactgcccaggggtgcgacgctatcgctagatgcaattgtcaaaccggagtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtcgaagctagtgagtattacccagccagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatccttagatgccaacacggtgtagtaggaattgtctccactggtggaaatggtcttgtggggtttgctgatgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactacatcaaa-ggcctcggtgatgcttttggtgtgggtttcactgatgcagtgtccagggaagtagaagcattgaagaaccatttaattggctcggaaggagctgttgagaagatcttgaagaacttggtgaagctaatctcagctttagtcatagtcgttaggagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcaaaagggcttgagtggatttctagcaaaatcagcaagttcattgattggcttaaggaaaaaattattccggccgctaaggagaaagttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatctcaaaccttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctacgcgactgaagccaaaagagtctatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcattagaggctctccaggaacaggcaagtcacttgctacgggcatcatagctagagctattgctgacaaataccattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagttactgttatggatgatctctgtcaaaacccagatggaaaggacatgtctctattttgtcaaatggtttctacagtggattttataccacccatggcatcactggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaaccaatgctagtaacatcgtagtccctacagtttcagattcagatgcgattcgcaggcggttttatatggactgcgatatagaggtgacggactcctacaagacggacctcggccgactcgacgcaggtagggccgctaagctttgcacagaaaataacaccgctaactttaagagatgcagcccactagtgtgtggcaaagctattcaactaagagacaggaagtctaaagtgagatatagtgttgacactgtagtgtcagagctaatcagagaatataataataggtccgccatcgggaataccatagaagccctcttccaaggaccccttaagttcaagcctataagaatt---agccttgaagaaaagccagccccggatgccattagcgacctacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgtcatttataaattgtttgctgggtttcagggtgcttattctggtgcgcctaagcaagccctcaagaaacccgtactaagaacagccacagttcaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaaccgaccaaggacacttcactatgttaggggtgcgagatcgcctagccattttgccacgccactcgcaaccaggaaaaactatctgggtggagcacaagttaattaatgtgctggatgctgtcgaattagtggatgagcgaggtgtaaacttggaactcacactagtaaccttagacaccaacgaaaagtttagggacgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggggtggtcacctcagtcggtaagatcataggaattcacattggtgggaatggacgccagggtttctgcgctggattgaagagaagctattttgccagtgaacagggagagatccaatggatgaagtccaataaagagactgggagactgaacattaatggcccaacccgtaccaaactggagcccagtgtgtttcatgatgtgtttgagggcgacaaggaaccagcagtcttaaccagtaaggatcccagacttgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactatgcaaatcagctaaagcaattagacataaacactaataagatgagcatggaagaagcatgttatggcactgaatacctggaggccatagacctgcacactagcgccgggtacccttatagtgccttgggtgttaagaaaagagacatacttgacccaatcactagagatactaccaaaatgaaattctacatggacaaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccttagacaagattaagaaagggaaatcccgtttgattgaagccagtagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgaaactttccatgccaacccggggactgtgaccgggtctgcagtagggtgcaatcctgatgtgttctggagtaaactaccaatcctgctgccgggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgagagatcggctactcagaggaggctgtgtcattaatagaaggaatcaaccacacccatcatgtgtatcggaacaagacatattgtgtcctcggtggaatgccctcaggctgttccggcacttccatctttaattccatgattaataacataataatcagaactctcttgattaaaccttttaatgggatcgatttagacgagttaaatatggtagatcatggagatgatgtgttagctagctacccgttccctattgactgctcggagttagctgaacagggtaaagagtatcgactgacaatgacacccgatgacaagtcgtcctgctttaatgaagttactcgggaaaatgccacatttttaaagagaggcttcttgccagatcaccaattcccgttcattatccaccctaccatgcccatgagggagatccccgagtccattcgttggagtaaagacgcacgcaacactcaggatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgcgagtacaatcagatcagttcctatcggaaaagctttggctataccaaatttcgagaactcgagaaggaattggcttgaattatttt--a--atatacagtat-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AF177911.1_Coxsackievirus_A16_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gtaacttagaagc------------tttatacactcac-gaccaa-tagtaggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-ttcccccggactgagtaccaatagactgc-tcacgcggttgaaggggaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcaccctcaaccca-ggggg-tggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tactggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttaattatatattgctccttaa--ctgtaaga-----aatgggctcacaagtctccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactataaggatgcatacgctgcaagtgcggggcgccaggatatgtctcaagatccgaagaaatttaccgaccctgtcatggacgtcatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgtggttatagtgatcgtgtggctcagcttaccattgggaactctaccatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaagcctacacgacctgacgtgtcagtgaacagatttttcacgctagacactaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaatgctcagttccactacctgtatcgatccgggttttgcgtgcacgttcagtgtaatgcgagtaaattccaccagggcgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaatg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagttctgacgcatccttacgtgttagatgcagggatccctttgagccaattgactgtgtgcccacatcagtggattaacttaagaaccaataattgtgcaaccatcatagttccatatatgaacacagttccttttgactcagctctcaaccactgcaactttggtctactggtcgtcccggtagtaccattggatttcaatgcaggcgccacatctgaaattcccattacagtcaccatagctcccatgtgtgcggaatttgcgggcctgcgccaggcagtaaagcaaggcataccaacagagctcaaacctggcaccaatcagtttctcactactgatgatggtgtttctgcaccaattttgccaggcttccacccaactccacctatacacataccaggggaagtacacaacctattggaaatatgcagagtggagaccatcctggaagttaacaa----------cctaaagactaacgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactgggccagctctgcaggtactacacccagtggtcaggttcattggaggtgacattcatgtttgcaggctcatttatggctacaggcaagatgctcatcgcctacaccccacctggggggaatgtgcccgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcgggttacagtcttctgtgacgttggtcgtgccatggattagtaacacacactatagggcacacgcccgtgctgggtactttgactattacaccactggcattataaccatatggtatcaaactaactatgtagtacccattggtgcccctactacagcatatatcgtagctttggcagcagcccaggacaacttcactatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accagaccgt--------------------------gaataatcaagtgaaccgctccttaactgcattgcaagtatta--------cctacagctgccgatactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtcaaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgccggtttggtcagcattattacaatgcccaccacgggtacaca-gaacacagatggttacgttaattgggacattgatttgatgggatatgctcaactgcggcggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacattcgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacccacttccagagattcattcgcttggcagactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcgccagccagtgcataccaatggttttatgatggttatcccaccttcggagagcatctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagtagggaccgaaaagtcaccacactccattaccctgagggtgtacatgaggattaaacacgtcagggcatggattccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaagggaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtgggcaactatagggtagtgaatcggcaccttgccacacacaacgactgggcaaatcttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacactatcgctagatgcaattgtcaaaccggagtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtcgaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatccttagatgccaacacggtgtagtaggaattgtctccactggtggaaatggtctcgtggggtttgctgatgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactacatcaaa-ggcctcggtgatgcttttggtgtgggtttcactgatgcagtgtccagggaagtagaagcattgaagaaccatttaattggctcggaaggagctgttgagaagatcttgaagaatttggtgaagctaatctcagctttagtcatagtcgttagaagtgactatgacatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggcattcccatagtgcaaaaacagagcgcttcatggctaaagaagtttaatgatatggctaacgctgcaaaagggcttgagtggatttctagcaaaatcagcaagttcattgattggcttaaggaaaaaattattccggccgctaaggagaaagttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctacgcgactgaagccaaaagagtctatgccctagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcattagaggctctccaggaacaggcaagtcacttgctacgggcatcatagctagagctattgctgacaaataccattctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagttactgttatggatgatctctgtcaaaacccagatggaaaggacatgtctctattttgtcaaatggtttctacagtggattttataccacccatggcatcattggaagagaaaggagtgtctttcacctctaagttcgtcattgcatcaaccaatgctagtaacatcgtagtccctacagtttcagattcagatgcgattcgcaggcggttttatatggactgcgatatagaggtgacggactcctataagacggacctcggccgactcgacgcaggtagggccgctaagctttgcacagaaaataacaccgctaacttcaagagatgcagcccactagtgtgtggcaaagctattcaactaagagacaggaagtctaaagtgagatatagtattgacactgtagtgtcagagctaatcagagaatataataataggtccgccattgggaataccatagaagccctcttccaaggaccccttaagttcaagcctataagaatt---agccttgaagaaaagccagccccagatgccatcagcgacctacttgctagtgtagatagcgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagtcgtgtctcttgtctatgtcatttataaattgtttgctgggtttcagggtgcttattctggagcgcctaagcaagctctaaaaaaacccgtactaagaacagccacagttcaaggaccgagcttagactttgccttatccctcctaaggcgcaacattagacaggtgcaaaccgaccaaggacacttcactatgttaggggtgcgagatcgcctagccattttgccacgccactcgcaaccaggaaaaactatctgggtggagcacaagttaattaatgtgctggatgctgtcgaattagtggatgagcaaggtgtaaacttggaactcacactagtaaccttagacaccaacgaaaagtttagggatgttaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatggatttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcaggacagtgtggaggggtggtcacctcagtcggtaagatcataggaattcacattggtgggaatggacgccagggtttctgcgctggactgaagagaggctattttgccagtgaacagggagagatccaatggatgaagcccaataaagagactgggagactgaacattaatggcccaacccgcaccaaactggagcccagtgtgttccatgatgtgtttgagggcaacaaggaaccagcagtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactatgcaaatcagctaaagcaattagacataaacattaataagatgagcatggaagaagcatgttatggcactgaatacctggaggccatagacctgcacactagcgccgggtacccctatagtgccttgggtgttaagaaaagagacatacttgacccaatcactagagatactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacttatgtgaaggatgagcttagatccttagacaagattaagaaagggaaatcccgtttgattgaagccagtagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgaaactttccatgccaacccggggactgtgaccgggtctgcagtagggtgcaatcctgatgtgttctggagtaaactaccaatcctgctgccaggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgagagatcggctactcagaggaggctgtgtcattaatagaagggatcaaccacacccatcatgtgtatcggaacaagacatattgtgtcctcggtggaatgccctcaggctgttccggcacttccatcttcaattccatgatcaataacataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgagttaaatatggtagcttatggagatgatgtgttagctagctacccgttccctattgactgctcggagttagccaaaactggtaaagagtatggactgacaatgacacccgctgacaagtcaccctgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcaccaattcccgttccttatccaccctaccatgcccatgagggagatccatgagtccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcctattggaaaagccttggctataccaaatttcgagaacttgagaaggaattggctcgaattatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746677.1_Human_coxsackievirus_A16_isolate_PM-31376-05_complete_genome
-------------------------------ct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgccagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagca-gcaacttagaagc------------ttcacactatcac-gaccag-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagtacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------gggttaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcaccctcaaccca-ggggg-cagcgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgactaacagagctattatt-----tacctg----tttatt-ggatacatccctc-----tcactct--------------caaggccattcaa-actcttgattatatattactccttaa--ctgtaaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaactcaaactctgcatcgg-aaggctcaaccataaattacacaactataaactactacaaggatgcatacgctgcaagtgcagggcgccaagatatgtcccaagatccaaagaaatttaccgaccctgtcatggacgttatacatgagatggctccaccgctcaagtctccaagcgctgaggcatgcggctatagtgatcgtgtggcccaactcaccattggaaactctaccatcacgacacaggaagcagctaacatagttatagcttatggggaatggcctgagtactgcccagacacagatgcaacggcagtcgacaaacccactcgacctgatgtgtcagtgaacagatttttcacgctggacactaaatcttgggccaagg------------------attctaagggatggtattggaagttccctgatgttctgacagaagtaggtgtctttggtcaaaacgctcagttccactacctgtatcgatctggattttgtgtgcacgtccagtgtaatgcaagtaaattccaccagggcgctttactggtggctgtgctgcctgagtatgtgctcggtactatcgcaggagggaccgggaacg------agaattctcatcctccctacgccactacacagcctggtcaggttggtgcagtcctgacacacccttacgtgctagatgcagggatccctttgagtcaattaacagtgtgtccacatcagtggatcaacctgaggaccaataattgtgcaaccattatagttccatatatgaacacagttccatttgactcagctctcaaccactgcaattttggtctactggtcatcccggtagtaccgttggattttaacgcaggtgccacatccgagattcccattacagttactatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtaaagcagggtataccaacagagcttaaacctggcaccaatcagtttcttactaccgatgatggtgtttctgcaccaattctgccaggtttccacccaactccacctatacacataccaggggaagtacacaacctattggaaatatgcagagtagagaccatcttggaggttaacaa----------cctgaaaactaatgaggccacccct------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgagttatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtccacaatactaggccaactctgcaggtactacacccagtggtcaggttcgctggaggtgacattcatgttcgcgggctcattcatggctacgggtaagatgcttatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacgcatgtgatttgggacttcggattgcagtcttccgtgacgttggtcgtgccatggattagtaacacacactatagggcgcacgcccgtgctgggtactttgactattacaccaccggcattataaccatatggtatcaaaccaactatgtagtacctattggtgctcccactacagcatacatcgtagctttggcagcagcccaggacaactttaccatgaaactatgcaaggacacagaagacattgagcaaacagctaatatacaaggggatccc--------attgcagacatgattg---accaaactgt--------------------------gaacaatcaagtgaaccgctcattaactgcgttgcaagtgcta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcgctacaagctgcagagacaggggcgtcatcaaatgctagcgacaagaatctcattgagactagatgtgtgttgaaccatcactccacacaggagacagccattgggaatttctttagccgtgccggtttggttagcatcattacaatgcccaccacgggtacaca-gaacacagatggttacgttaactgggacattgatttgatggggtatgctcaactgcggcggaaatgcgagttgttcacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccagttactgcagtacatgtatgtcccgccaggggctccgaaacccacttccagagattcattcgcttggcaaaccgctactaacccatctgtgtttgtgaaaatgacagacccaccagctcaagtatcagtccccttcatgtcaccagccagtgcttaccaatggttttatgatggttatcccacctttggagagcatcttcaggcaaatgacctagactatggtcaatgcccgaataatatgatgggcacttttagcattagaacagtagggaccgagaagtcaccacactccattaccctgagggtatacatgaggattaaacacgtcagggcgtggatcccaaggccactgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgcactagcactagtagagacaaaat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcagtcaggtgccatatacgtaggcaactatagggtagtgaatcggcaccttgccacacataacgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtttcttccaccactgcccaggggtgcgacactattgctagatgcaattgtcaaaccggaatatactattgcaactccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaggctagtgaatattacccagctagatatcaatcccacctcatgctcgccgtgggtcactcggaacctggtgactgcggtggcatcctcaggtgtcaacacggtgtagtaggaattgtctccactggtggaaatggtcttgtggggttcgctgatgtcagagatcttctatggctggatgaggaagcaatggagcaaggagtgtctgactatatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtccagagaggtggaggcgttgaagaaccatttaattggctcagaaggggctgttgagaaaatcttgaagaatttggtgaagctaatttcagctctagtcatagtcgttaggagtgactatgacatgatcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcttctattcttggcattcccatagtgcaaaaacagagcgcttcatggttaaagaagttcaatgatatggctaacgctgcaaagggacttgagtggatttctagtaaaatcagtaaattcattgattggcttaaggaaaagattattccggccgctaaggagaaagttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatctcaaatcttgaacagtctgctgcttcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagctca---------cttctgccgcaaatttcagccactctacgcaattgaagccaaaagagtctatgctctggagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacccgtatgtttgatcattagaggctctccagggacaggcaagtcgcttgccacgggcatcatagctagagctatagctgacaaatatcattctagcgtctactcgctccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcattattttgccaaatggtctctacagtggattttataccacctatggcatccctggaagagaaaggagtgtctttcacctctaagtttgtcatagcatcgaccaatgctagcaacatagtagttcctacagtttcagattcagatgcgattcgcaggcgattctacatggactgcgatatagaggtgacagactcctacaagacggaccttggccgactcgacgcaggcagggccgctaaactttgcacagagaacaacaccgctaactttaagagatgcagtccactagtgtgtggtaaagctattcaactaagagataggaagtccaaagtgaggtatagtattgatactgtagtgtcagagctaatcagagagtataataataggtctgccattggcaatactatagaagccctcttccaaggaccccctaagttcaagcctataagaatt---agccttgaagagaagccagccccagatgctatcagcgacctacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaggggtggataattccagagacaccgaccaatgtggaacgtcaccttaacagagcagtgttggtgatgcaatccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttataaattgttcgctgggtttcagggtgcctattctggtgcgcccaagcaggctctcaaaaagcccgtgctaagaacagccacggttcaaggaccgagcttagattttgccttatccctcttaaggcgcaacatcagacaggtgcaaaccgatcaaggacactttactatgttaggggtgcgagatcgcctagccattctgccacgccactcgcaaccaggaaaaaccatctgggtggagcacaagttaattaatgtgctagatgctgtcgaattggtagatgagcaaggtgtgaacttggaactcacactagtgactttagacaccaacgagaagtttagggacgtcaccaagttcattccagagacaatcaccggggcaagcgacgcaaccttggttattaacaccgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatggatttctaaacctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaagcaggacagtgtggaggggtggtcacctcagtcggtaagatcattggaattcatatcggtgggaacggacgtcagggtttctgtgctggactgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagtccaataaagagactgggagactgaacattaatggcccaacccgtaccaaattagagcccagtgtgttccatgatgtgtttgagggcaacaaagaaccagcagttttaactagtaaggaccccagactcgaggttgattttgagcaagctttgttttccaagtacgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgctctccactacgcaaatcagctgaagcaattagacatcaacactaataagatgggcatggaagaagcatgctatggcactgaatacctggaggctatagacctacacaccagtgctgggtacccctatagtgccttgggtgttaagaaaagagacatactcgatccaatcaccagagacactaccaaaatgaaattctacatggataaatatgggttggacttgccctactccacctatgtgaaggatgagcttagatccctagacaagattaagaaggggaaatcccgtttgattgaagccagcagcctgaatgactcagtctacctcaggatgacttttgggcatctctatgagacctttcatgccaacccggggactgtgaccggatctgcagtcgggtgcaatcctgacgtgttctggagcaaactaccgatcctgctaccaggatcgctctttgcatttgattatacagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagattggctattcagaagaggctgtgtcactaatagaagggatcaaccacacccatcatgtgtatcggaacaagacatattgtgtcctaggtggaatgccctcaggctgttccggcacttccatcttcaattccatgattaataacataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgaattaaacatggtagcttacggagatgatgtcttagctagctatccattccctatcgactgttcggagttagctaaaactggtaaagagtatgggctgacaatgacacctgctgataaatcaccatgctttaacgaagtcacatgggagaatgccacattcttaaagagaggcttcctgccagatcaccaattcccattccttatccaccccaccatgcccatgaaagagatccatgaatccattcgttggactaaagacgcacgcaacactcaggatcacgtgcgctctttgtgcctcttagcatggcataacgggaaggaggaatatgaaaaatttgtgagtacaatcagatcagttcctattgggaaagccttggctataccaaatttcgagaacttgagaagaaattggctcgaactatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-t-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617097.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_B_STU4_DEU_2010
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcctac-t-gggcgctagcacactgatcctgcgggatctttgtgcgcct-g-ttttata-----acccc-------tccc-t-----aagta-gcaacttagaagc------------ttcacactatcac-gaccga-tagtgggcgtggcacaccagtcacgtcttgg-tcaagcactcctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgctggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgtaccctcaaccca-ggggg-tagcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc-tttta---ttcct--tactggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctatcatt-----tacctg----tttgtt-ggatacgttcctc-----ttgacct--------------caaggttattcaa-actcttgattatatattactccttaa--ctataaga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaattcgaactctgcatcgg-aaggctcaaccataaattacacaactataaactactataaggatgcatacgcagcaagtgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggatgttatacatgaaatggctccaccgctcaaatccccaagcgctgaagcatgtggctatagcgatcgtgtggctcaacttaccattgggaactctactatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtattgcccggatacagatgcaacggcagtcgacaagcccacacgacccgacgtgtcagtgaacagatttttcacgttagacactaaatcttgggctaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggacaaaacgctcagttccactacctgtatcgatctggattttgcgtgcacgtccagtgtaatgcaagtaaattccaccagggcgctttactggtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaatg------agaattcacatccaccctacgccactacacagcctggtcaggtcggtgcagtcctaacgcatccttacgtgctagatgcagggattcctttgagccaattaactgtgtgcccacatcagtggattaacttgagaaccaacaattgtgcaaccattatagtcccatatatgaacacagtcccatttgattcagctctcaaccactgcaactttggtctgctggttatcccagtagtgccattggatttcaacgcaggcgccacgtccgagattcccattacagtcactatagctcccatgtgtgcggaatttgcgggtctgcgccaggcagtgaagcaaggcataccaacagagctcaagcctggcactaatcagtttctcactaccgatgatggtgtctctgcaccaattttgccgggtttccatccaactccacctatacacataccaggggaagtacacaacctattggaaatatgcagagtggaaaccatcttggaggttaacaa----------tctgaagaccaatgagaccaccccc------atgcaacgcttgtgctttccagtgtcagtgcagagca------aaacgggcgagttatgcgctgcctttagagcagatcctggaagagatggcccgtggcagtccacaatactgggccagctctgcaggtactacacccagtggtcaggttcattggaagtgacattcatgtttgcgggctcattcatggctacaggtaagatgcttatcgcctacaccccacctgggggaaatgtgcctgcggataggatcacagcaatgttagggacgcacgtgatctgggacttcgggttacagtcttctgtgacgctggtcgtgccatggattagcaatacacactatagggcacacgcccgtgctgggtactttgactattacactaccggcattataaccatatggtaccagactaactatgtagtgcctattggagctcccactacagcatacattgtggctttggcagcagctcaagataacttcaccatgaaactatgcaaggacacagaggacattgagcaaacagctaatatacaaggggaccct--------attgcagacatgattg---accaaactgt--------------------------gaataatcaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaacactgaagcaagtagtcatagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtcaaatgctagtgacaaaaatctcattgagacgagatgtgtgctgaaccatcactccacacaggagacagccattgggaacttctttagccgtgccggtttggttagcattattacaatgcccaccacgggtacaca-gaacacagatggttacgttaactgggacatcgatttgatggggtacgcccaactacggcggaaatgcgagttgttcacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagctagtcccccaattactgcagtacatgtatgtcccgccaggggccccgaaacccacctccagagattcatttgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtcccattcatgtcaccagccagtgcataccaatggttttatgatggttatccaactttcggagaacacctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggtacttttagcattaggacagttggaaccgagaagtcaccacactccatcaccctgagggtatacatgaggatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccttacttatttaagaccaatccaaattataaaggaaa----tgacattaagtgcactagcactagtagagacaaaat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtaggcaattatagggtggtgaaccggcaccttgccacacacaacgactgggcaaaccttgtgtgggaggatagctctagggacctgctagtctcttccaccaccgcccaggggtgtgacactattgctagatgcaactgtcaaaccgggatatactattgcaactccaaaaggaaacattacccagttagtttcaccaaacccagtctggtatttgtggaggccagtgagtactacccagctaggtaccaatctcacctcacgcttgctgtgggccactcggaacctggtgattgcggtggcattctcagatgccaacacggtgtggtaggaattgtctctacaggtggaaatggtcttgtggggtttgctgatgtcagagatcttctatggctggatgaagaagcaatggagcaaggagtatctgactatatcaaa-ggccttggtgatgcatttggtatgggtttcactgatgcagtgtccagagaggtggaggcgttgaagaatcatttaattggctcagaaggggctgttgagaagatcttgaagaacttggtgaagctaatttcagccttagtcatagttgttaggagtgactatgacatggttacactcacagctacacttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggcatccccatagtgcaaaaacagagcgcttcatggctaaaaaaatttaatgatatggctagtgctgcaaaggggctcgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagatcatcccggctgctaaggagaaggttgaattcttaaacaacctgaaacagctcccc-ttattggagaaccaaatctcaaatcttgaacagtccgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtatcagccactctacgcaactgaagccaaaagagtctatgttttagagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcattagaggctctccaggaacaggcaagtcacttgctacaggcattatagctagggctattgctgacaaatatcattctagcgtttactcactccccccagacccagaccattttgatggatacaaacaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgtcaaatggtttctacagtagattttataccacctatggcatccctggaagagaaaggagtgtctttcacctctaagtttgttattgcgtcgaccaatgctagcaatataatagttccaacagtttcagattcagatgcgattcgcaggcggttctatatggactgcgacatagaggtgacagactcctacaagacggacctcggccggctcgacgcaggtagggctgctaaactttgcacagaaaacaacaccgctaacttcaagagatgcagtccattagtgtgtggtaaagctatccaactaagagataggaagtccaaagtgagatatagtattgatactgtagtgtcagagctaatcagagagtataataacaggtctgcgattggtaacaccatagaagccctcttccaaggaccccctaaattcaagcctataagaatt---agccttgaagaaaaaccagccccagatgctatcagcgacctactcgctagtgtcgatagcgaggaggttcgacaatactgt-agagagcaagggtggataattccagaaacaccgaccaatgtggaacgccacctcaacagagcagtgctggtgatgcaatccatcgccaccgtggtcgcagttgtgtcccttgtctatgtcatttataaattgttcgctgggtttcagggcgcttattctggtgcgcccaagcaagctctcaaaaaacccgtgctaagaacagccacagtccaaggaccgagcttagactttgccttatcccttctaaggcgcaacattagacaagtacaaaccgatcaaggacatttcaccatgttaggggtgcgagatcgcctagccattctaccgcgccactcacaaccagggaaaactatctgggtggagcacaagttaattaatgtgctggatgctgttgagttagtagatgagcaaggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggacgttaccaagtttattccagagacaatcaccggggcaagcgacgcaaccttggttattaacaccgagcatatgccctcaatgtttgttccagtgggcgatgttgtacaatatgggtttttgaatcttagcggtaagcccacacaccgaaccatgatgtacaacttccccacaaaggcaggacagtgtggaggggtggttacctcagtcggtaagatcattggaattcacatcggtggaaatggacgtcagggattctgtgctggactgaagagaggctattttgccagtgaacaaggagagatccaatgggtgaagcccaataaggagactgggagactgaacattaatggcccgacccataccaaattggagcccagtgtattccatgatgtgtttgagggcaacaaagaaccagcagtcttaaccagtagggatcccaggctcgaggttgattttgagcaagctttgttttccaagtatgtgggaaacaccctgcacgagcctgacgagtacgtgacacaggctgccctccattacgcaaatcagctaaagcaattagacattaacaccagtaaaatgagcatggaagaagcatgctatggcaccgaatacctggaggccatagatctgcacaccagtgccgggtacccctatagcgccttgggtgttaagaaaagagacatactcgacccagtcaccagagacaccaccaagatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccctagacaagattaagaaagggaaatcccgtttgattgaagccagcagcctgaatgactcagtttaccttaggatgacttttgggcatctctatgagacctttcatgccaacccggggactgtgaccggatctgctgtaggatgcaatcctgatgtgttctggagcaaactgccggtcctgttgccaggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtctttaatagaagggatcaatcacacccaccatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacctccatcttcaattccatgatcaataacataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgagttgaatatggtggcctacggagatgatgtgttggccagctatccatttcctattgactgctcggagttagctaaaactggtaaagagtatggactgacaatgacacctgctgataaatcactctgttttaacgaagtcacatgggagaatgccacattcttaaagagaggcttcttgccagatcatcaattcccattccttatccaccccaccatgcccatgaaggagatccatgagtctattcgctggactaaagacgcacgcaacacccaggatcacgtgcgctctttgtgtctcctagcatggcacaatgggaaagaggaatatgaaaaatttgtgagtgcaattagatcagttcctattgggaaagccttggctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617099.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_B_CF160074_FRA_2010
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcctac-t-gggcgctagcacactgatcctgcgggatctttgtgcgcct-g-ttttata-----acccc---t---tccc-t-----aagta-gcaacttagaagc------------ttcgcactatcac-gaccga-tagtgggcgtggcgcaccagtcacgtcttgg-tcaagcactcctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgctggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacacggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcttaactgcggagcgcgtaccctcaaccca-ggggg-cggcgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc-tttta---ttccta-tactggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgaccaacagagctatcatt-----tatctg----ttcgtt-ggatacgttcctc-----ttgacct--------------caaggctattcaa-actcttgattatatattacttcttaa--ccataaga-----aatggggtcacaagtctccactcaacgatccgggtcacatgagaattcgaactctgcatcgg-aaggctcaaccataaattacacaactataaactactataaggatgcatacgctgcaagtgcagggcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggatgttatacatgaaatggctccaccgctcaaatccccaagcgctgaggcatgtggttatagcgatcgtgtggctcaacttaccattgggaactctactatcacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccggatacagatgcaacggcagtcgacaagcccacacgacccgacgtgtcagtgaacagatttttcacgttagacactaaatcttgggctaagg------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggacagaacgctcagttccactacctgtatcgatctggattttgcgtgcacgtccagtgtaatgcaagtaaattccaccagggcgctttacttgtggctgtgctgcctgagtatgtgctcggcactatcgcaggagggaccgggaatg------agaattcacatccaccttacgccactacacagcctggtcaggttggtgcagtcctaatgcatccttacgtgctagatgcagggattcctttgagccaattaactgtgtgcccacatcagtggattaacttgagaaccaataattgtgcaaccattatagtcccatatatgaacacagtcccatttgattcagctctcaaccactgcaattttggtctgctggtcatcccggtagtgccattggatttcaacgcaggcgccacgtccgaaattcccattacagtcactatagctcccatgtgtgcggaatttgcgggtctgcgtcaggcagtgaagcaaggcataccaacagagctcaagcctggcactaatcagtttctcactaccgatgatggtgtctctgcaccaattttgccaggtttccatccaactccacctatacacataccaggggaagtacacaacctattggaaatatgcagagtggaaaccatcttggaggttaacaa----------tctgaagaccaatgagaccaccccc------atgcaacgcttgtgctttccagtgtcagtgcagagca------aaacgggcgagttgtgcgctgcctttagagcagatcctggaagagatggtccgtggcagtccacaatactgggccagctctgcaggtactacacccagtggtcaggttcattggaagtgacattcatgtttgcgggctcattcatggctacaggtaagatgcttatcgcctacaccccacctgggggaaatgtgcctgcggataggatcacagcaatgctagggacgcacgtgatctgggactttgggttacagtcttctgtgacgctggttgtgccatggattagtaatacacactatagggcacatgcccgtgctgggtactttgactattacactaccggcattataaccatttggtatcagactaactatgtagtgcccattggagctcccactacagcatacattgtggctttggcagcagctcaagataacttcaccatgaaactatgcaaggacacagaggacattgagcaaacggccaatatacagggggatcct--------attgcagacatgattg---accaaactgt--------------------------gaataatcaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaacactgaagcaagtagtcatagattaggcactggtgttgtaccagcactacaagccgcggagacaggggcgtcgtcaaatgctagtgacaaaaatctcattgagacgagatgtgtgctgaaccatcactccacacaggagacagccattgggaatttctttagccgtgccggtttggttagcattattacaatgcccaccacgggtacaca-gaacacagatggttacgttaactgggacatcgatttgatggggtacgctcaactacggcggaaatgcgagttgttcacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggcgagctagtcccccaattactacagtacatgtatgtcccgccaggggccccgaaacccacctccagagattcatttgcttggcaaactgctaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttatgatggttatccaactttcggagaacacctccaagcaaatgacctagattatggtcaatgcccgaataatatgatgggtacttttagcattaggacagttggaaccgagaagtcaccacactccatcaccctgagggtatacatgaggatcaaacacgtcagggcatggatcccaagacctctgagaaatcaaccctacttatttaaaaccaatccaaattacaaaggaaa----tgacattaagtgcactagcactagtagagataaaat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtaggcaattatagggtggtgaaccggcaccttgccacacacaacgactgggcaaaccttgtgtgggaggacagctctagggacctgctagtctcttccaccaccgcccaggggtgtgacactattgctagatgcaactgtcaaaccgggatatactattgcaactccaaaaggaaacactacccagttagtttcaccaaacccagtctggtattcgtggaagccagtgagtactatccagctaggtatcaatcccacctcatgcttgctgtgggccactcggaacctggtgattgcggtggcattttcagatgccaacacggtgtagtaggaattgtctctacaggtggaaatggtctcgtggggtttgctgatgtcagagatcttctatggctggatgaggaagcaatggagcaaggagtatctgactatatcaaa-ggtcttggtgatgcatttggtatgggtttcaccgatgcagtgtccagagaggtggaggcgttgaagaatcatttaattggctcagaaggggctgttgaaaagatcttgaagaacttggtgaagctaatttcagccttagtcatagttgttaggagtgactatgacatggttacactcacagctacacttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggcatccccatagtacaaaaacagagcgcctcatggctaaaaaaatttaatgatatggctagtgctgcaaaggggctcgagtggatttctagtaaaatcagcaagttcattgattggcttaaggaaaagatcatcccggctgctaaggagaaagttgaattcttaaacaacctgaaacagctcccc-ttattggagaaccaaatctcaaatcttgaacagtccgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgtcgcaagtatcagccactctacgcaactgaagccaaaagagtctatgttctagagaaaaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgatcattagaggctctccaggaacaggcaagtcacttgctacgggcattatagctagggctattgctgacaaatatcattctagcgtttactcacttcccccagacccagaccattttgatggatacaaacaacaagtagtcactgttatggatgatctttgtcaaaacccagacggaaaggacatgtcactattttgtcaaatggtttctacagtagattttataccacctatggcatccctggaagagaaaggagtgtctttcacctctaagtttgttattgcgtcgaccaatgctagcaatatagtagttccaacagtttcagattcagatgcaattcgcaggcggttttatatggactgcgacatagaggtgacagactcctacaagacggacctcggccggctcgacgcaggtagggccgctaaactttgcacagaaaacaacaccgctaactttaagagatgcagcccgttagtgtgtggtaaagctatccaactaagagataggaagtccaaagtgagatatagtattgatactgtagtgtcagagctaatcagagagtataataacaggtctgcaattggtaacaccatagaagccctcttccaaggaccccctaaattcaagcctataagaatt---agccttgaagaaaaaccagccccagatgctatcagcgacctactcgctagtgtggatagtgaggaggttcgacaatactgt-agagagcaagggtggataattccagaaacaccggccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgttatttataaattgttcgctgggtttcagggcgcttattctggtgcgcccaagcaagctctcaagaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttgtccctcttaaggcgcaacattagacaggtgcaaaccgatcaaggacacttcactatgttaggggtgcgagatcgcctagccattttgccacgccactcgcaaccaggaaaaactatctgggtggagcacaagttaattaatgtgctggatgctgttgagttagtagatgagcaaggtgtgaacttggaactcacactagtaactttagacaccaacgaaaagtttagggacgttaccaagttcattccagagacaatcaccggggcaagcgacgcaaccttggttattaacaccgaacatatgccctcaatgtttgttccagtgggcgatgttgtacaatatggatttttgaatcttagcggtaagcccacacaccgaaccatgatgtacaacttccccacaaaggcaggacagtgtggaggggtggtcacctcagttggtaagatcattggaattcacatcggtggaaatggacgtcagggattctgtgctggactgaagagaggctattttgccagtgaacaaggagagatccaatgggtgaagcccaataaggagactgggagactgaacattaatggcccgacccacaccaaattggagcccagtgtattccatgatgtgtttgagggcaacaaagaaccagcagtcttaaccagtagggatcctaggctcgaggttgattttgagcaagctttgttttccaagtatgtggggaacaccctgcacgagcctgacgagtacgtgacacaggctgccctccactacgcaaatcagctaaagcaattagacattaacaccagtaaaatgagcatggaagaagcatgctatggcaccgaaaacctggaggccatagatctgcacaccagtgccgggtacccctatagtgccttgggtgttaagaaaagagacatactcgacccagtcaccagagacactaccaaaatgaaattctacatggataaatatgggttagacttgccctattccacctatgtgaaggatgagcttagatccctagacaagattaagaaagggaaatcccgtttgattgaagccagcagcctgaatgactcagtttaccttaggatgacttttgggcatctctatgagacctttcatgccaacccggggactgtgaccggatctgcagtagggtgcaatcctgatgtgttctggagcaaactgccgatcctgttgccaggatcgctctttgcatttgattactcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgtgagatcggctactcagaggaggctgtgtcattaatagaagggatcaaccacacccaccatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgttccggcacctccatcttcaattccatgatcaataacataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgagttgaatatggtggcctacggagatgatgtgttggccagctatccatttcctattgactgctcggagttagctaaaactggtaaagggtatgggctgacaatgacacctgctgataaatcaccctgctttaacgaagtcacatgggagaatgccacattcttaaagagaggcttcctgccagatcaccaattcccattccttatccaccccaccatgcccatgaaggagatccatgagtctattcgctggactaaagacgcacgcaacacccaggatcacgtgcgctctttgtgcctcctagcatggcacaatgggaaagaggaatatgaaaaatttgtgagtacaattagatcagttcctattgggaaagccttggccataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KC342228.1_Human_coxsackievirus_A16_strain_G08_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcggaatctttgtgcgcct-g-ttttatg-----accct---t---ttcc-c-----aagta-gcaacttagaagc------------tctacacaatcac-gaccaa-tagtgggcgtggcgcgccagccacgtcttgg-ccaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgaggaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atttct-tactggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctgttgtt-----taccta----tttatt-ggatacgtccctc-----ttaatct--------------caaggccattcaa-actcttgattatatattgctccttaa--ctgtaaga-----aatggggtcacaagtctccacccagcgatccgggtcacatgagaactcaaattctgcatcgg-agggctcgaccataaattacacaactataaactactataaggatgcatacgccgcaagtgcggggcgccaggatatgtcccaagacccgaagagatttactgaccctgtcatggacgttatacatgagatggccccaccgctcaagtctccaagcgctgaggcatgcggttatagtgatcgtgtggctcagcttaccattgggaactctaccattacgacacaggaagcagctaacatagtcatagcttatggggagtggcctgaatactgcccagacacagatgcaacggcagtcgacaaacccacacgccctgacgtgtcagtgaacagattttttacgctagacactaaatcttgggccaagg------------------attcgaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgcccagttccactacttgtatcggtctggattctgtgtgcacgttcagtgtaatgcaagtaaatttcaccaaggcgctttactggtggctgtgctgcccgagtatgtactcggcactatcgcaggagggactgggaatg------agaattctcatcctccctacgctactacgcagcctggtcaggttggtgcagttctgacgcacccttacgtgctagatgcagggatccctctgagccaattaactgtgtgcccacatcagtggattaacttaagaaccaataattgtgcaaccattatagtaccatatatgaacacagttcctttcgactcagctctcaaccactgcaactttggtctactggtcatcccagtagtaccattggacttcaatgcaggcgccacatctgaaattcccattacagtcaccatagctcccatgtgcgcggaatttgcgggtctgcgccaggcagtcaagcaaggcataccaacagagcttaaacctggtactaatcagtttcttactactgatgatggtgtttctgcaccaattttgccaggtttccatccaactccacctatacacataccaggggaagtacgcaacctattggaaatatgcagagtggagaccatcctggaagtcaacaa----------cctaaagactaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgaattgtgtgctgcctttagagcagaccccggaagagatggtccgtggcaatccacaatactgggccaactctgcaggtactacacccagtggtcaggttcattggaggtgacattcatgtttgcaggctcattcatggctacaggtaagatgctcatcgcctacaccccacccgggggaagtgtgcctgcggacagaatcacagcaatgctagggacgcacgtgatctgggacttcggattacagtcttctgtgacgttggtcgtgccatggattagtaacacacactatagggcacacgcccgtgctgggtattttgactattacaccactggcatcataaccatatggtatcaaactaactatgtagttcccattggtgctcccactacagcatacatcgtggctttggcagcagcccaggacaacttcactatgaaactatgcaaggatacggaggacattgagcagacagccaacatacaaggggatcct--------attgcagacatgattg---accagactgt--------------------------gaacaaccaagtaaaccgctccttgactgcattgcaggtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcactacaagctgcggagacaggggcgtcgtctaatgctagtgacaagaacctcattgagactagatgtgtgttgaaccaccactccacacaggagacagccattgggaatttctttagccgtgccggtttggttagcatcattacaatgcccaccatgggtacaca-gaacacggatggttatgctaattgggacattgacctgatgggatatgctcagctgcggcggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacatttgtcgtggccaaacctaatggtgagctagtcccacaattactgcagtacatgtatgtcccgccaggggccccaaaacccacttccagagattcgtttgcttggcagactgccaccaatccatccgtgtttgtgaaaatgacagacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcatatcaatggttttatgatggttatcccaccttcggagagcacctccaggcaaatgacctagattatggtcaatgcccgaataatatgatgggcacttttagcattaggacagtagggactaagaagtcaccacactccattaccctgagggtgtatatgaggattaaacacgttagggcatggatcccaaggcctctgagaaatcaaccctatctattcaagaccaacccaaattataaaggaaa----tgatattaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttggacaacaatcaggcgccatatatgtgggcaactacagagtagtgaatcggcaccttgccacacacaacgactgggcaaatcttgtgtgggaggacagcactagggacctgttagtctcttccaccaccgcccagggttgcgacaccatcgctaggtgcaattgtcaaaccggagtatactactgcagctccaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggcgattgcggtggcatcctcaggtgccaacacggtgtggtgggaattgtctccactggtggaaatggtcttgtggggtttgctgatgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggcgatgcttttggtgtgggcttcactgatgcagtgtccagggaagtagaggcattgaagaaccatttaattggctcagaaggagctgttgagaggatcttgaagaacttggtgaagctaatctcagctttagtcatagtcgttaggagtgactatgacatggtcactctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctatccttggcattcctatagtgcaaaaacagagcgcttcatggctaaagaagtttattgatatggctaacgctgcaaaagggcttgagtggatttctagcaaaatcagcaagttcattgattggcttaaggaaaaaattattccggccgctaaggagaaagttgagttcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatctcaaatcttgagcagtctgctgcctcgcaagaagatttagaagctatgtttggtaatgtgtcatatttagctca---------cttctgccgcaagtttcagccactttacgcgactgaagccaaaagagtctacgctctagaaagaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcattagaggctctccaggaacaggtaagtcacttgccacgggcattatagctagagctattgccgacaaataccactctagtgtttactcacttcccccagatccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgccaaaacccagatggaaaggacatgtctctattttgccaaatggtttctacagtggactttataccacccatggcatcactggaagagaaaggagtgtctttcacctctaagttcgttattgcatcaaccaatgctagtaatattgtagttcctacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcactgaaaacaatactgctaacttcaagaaatgtagcccactagtgtgtggcaaggccattcaactaagagacaggaaatctaaagtgagatatagcattgatactgtggtgtcagagctaatcagagagtataacaataggtccgccatcgggaataccatagaagccctcttccaaggaccgcctaagttcaggcctataagaatt---agccttgaagaaaagccagccccagatgccatcagtgacctgcttgctagtgtggatagcgaggaggtccaacaatactgt-agggaacaggggtggataattccagaaacaccgaccaacgtggaacgccacctcaacagagcagtgctggtgatgcagtccatcgccaccgtggttgcagttgtgtctcttgtctatgtcatctacaaattgtttgccgggtttcagggtgcttattctggtgcgcctaagcaagccctcaaaaagcccgtgctaagaacagccacagtacaaggaccgagcttagacttcgccttatccctcctaaggcgcaacatcagacaggtgcaaaccgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaagactatttgggtggagcacaagctaattaatgtgctggatgctgtcgaattggtggatgagcaaggtgtaaacttggaactcacactagtaaccttagacaccaacgaaaaatttagggatgttactaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggcgatgttgtacaatacgggtttctgaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcgggacagtgtggaggtgtggttacctcagttggcaagatcattggaattcacatcggtgggaatggacgtcaaggtttctgtgctggattgaagagaggttactttgccagtgaacaaggagagatccaatggatgaagcccaacaaagaaactggaagactgaacattaatggcccaactcgtactaaattggagcccagtgtattccatgatgtgtttgagggcaacaaagaaccagcagtcttatccagtaaggatcccagactcgaggttgattttgagcaagcattgttttccaagtacgtggggaacaccctacacgagcctgacgagtacgtgactcaggctgctctccactatgcaaatcagctaaagcaattagatataaacactaataaaatgagcatggaggaagcatgctatggcactgaacacctggaggccatagacctgcacaccagtgccgggtacccctatagtgccttgggtgtcaagaagagagacatacttgacccaatcactagagacactaccaaaatgaaactctacatggataaatatgggttagacttgccctattccacctatgtggaagatgagcttaggtccttagacaagattaagaaggggaaatctcgtttgatagaagccagtagcctgaatgactcagtctaccttaggatgacttttgggcatctctatgaaacttttcatgccaacccgggaactgtgaccgggtctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgattctgttgccgggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagagtggtttagagctttagaggtggttctccgagagatcggctattcagaggaggctgtatcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccctcaggctgctccggtacttccatcttcaattccatgatcaataacgtaataatcagaactctcttgatcaaaacttttaaggggatcgatttagatgagttgaatatggtagcttatggagatgatgtattagctagctatccgttccccattgattgctcggagttagccaaaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccctgctttaatgaagtcacctgggaaaatgctacattcttaaagagaggcttcctgccagaccaccaattcccattccttatccaccctaccatgcccatgagggagatccacgagtccattcgctggactaaagacgcacgcaacactcaagatcacgtgcgctctctgtgcctcctaacatggcacaatgggaaggaggaatatgaaaaatttgtgagtacaattagatcagttcctattggaaaagccttagctataccaaattttgagaacttgagaagaaattggctcgaattatttt--a--gtatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>FJ198212.1_Human_coxsackievirus_A16_strain_GZ08_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----accct---t---tccc-t-----aagca-gcaacttagaagc------------tttgtacaatcac-gaccag-tagtgggcgtggcgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcaccctcaaccca-ggggg-cggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccag--tgtctaacagagctattgtt-----tactta----tttatt-ggatacgtccctc-----tcaatct--------------caaggtcattcaa-acccttgattatatattgctccttaa--ttgtaaga-----aatggggtcacaagtctccactcaacgatccgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaactactacaaagatgcatacgctgcaagtgcggggcgccaggatacgtcccaagacccgaagaaatttactgaccctgtcatggacgttatacatgagatggccccaccgctcaagtctccaagcgctgaggcatgtggttacagtgatcgtgtggctcaactcaccattgggaactctaccatcacgacacaggaagcagctaacatagtaatagcctatggagagtggcctgagtactgcccagacacagatgcaacggcagttgacaaacccacacggcctgacgtgtcagtgaacagatttttcacgctagacactaaatcttgggccaagg------------------attcaaagggatggtattggaaattccctgatgttctgacagaagtaggtgtttttggtcaaaacgctcagttccactacctgtatcgatctgggttttgcgtgcacgttcagtgtaatgcaagtaaatttcaccaaggcgctttactggtggctgtgctgcccgagtatgtactcggcactattgcaggagggaccgggaacg------aaaattcccaccctccctacgccactacgcagcctggtcaggtcggtgcagttttgacgcacccttacgtgctagatgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaaccaataattgtgcaaccattatagttccatatatgaacacagttcctttcgactcggctctcaaccattgcaattttggtctactggtcatcccggtggtaccattggatttcaatacaggcgctacatctgaaattcccattacggtcaccatagctcccatgtgcgcggaatttgcgggtctacgccaggcagtaaagcaaggcattccaacagagctcaaacctggtaccaaccagtttcttactactgatgatggtgtttctgcaccaattctgccaggtttccatccaactccacctatacacataccaggggaagtacacaatctattggaaatatgcagagtggagaccatcctggaagttaacaa----------cttaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaacgggcgagttatgtgctgcctttagggcagaccccggaagagatggcccgtggcagtccacaatactgggccaactctgcaggtactacacccagtggtcaggttcattggaggtgacattcatgtttgcaggctcatttatggctacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcggacagaatcacagcaatgctaggaacacatgtgatctgggacttcggattacagtcttctgtgacgttggtcgtgccatggattagtaatacacactatagggcacatgcccgtgctgggtactttgactattacaccactggcatcataaccatatggtaccaaactaactatgtagtgcccattggtgctcccaccacagcgtacatcgtggctttggcagcagctcaggacaacttcactatgaaactatgcaaggatacagaggacatcgagcaaacagctaatatacaaggggatcct--------attgcagacatgattg---accagacagt--------------------------gaacaaccaagtgaaccgttccttgactgcattgcaagtacta--------cctacagctgccaacactgaagcaagtagtcacagattaggcactggtgttgtaccagcattgcaagccgcggagacaggggcatcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccaccactccacacaggagacagctattgggaatttctttagccgtgccggtttggtcagcattattacaatgcccactacgggcacaca-gaacacagatggttatgtaaattgggacattgacttgatgggatatgcccagctgcggcggaaatgcgagttgtttacctacatgcgcttcgatgctgaattcacattcgtcgtagccaaacccaacggtgagctagtcccccagttgctgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagactcatttgcttggcagactgccaccaacccatctgtgtttgtgaaaatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagcgcataccaatggttttatgatggttatcccaccttcggagagcatctccaagcaaatgacctagattatggtcaatgccctaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctatttgtttaagactaacccaaactataaaggaaa----tgatatcaagtgcaccagcactagtagagacaagat---aacaac---------------------------------------attggga------------------------------------------aagtttggacagcaatcaggtgccatatatgtgggcaactatagggtagtgaatcggcaccttgccacacacaacgactgggcaaatcttgtgtgggaggacagctctagagacctgttagtctcttccactactgcccaggggtgtgatactatcgctaggtgcaattgtcaaaccggaatatactattgcagttccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtagaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtaggccactcggaacctggtgactgtggtggcatcctcaggtgccaacacggtgtagtggggattgtctccactggtggaaatggtctagtggggtttgctgatgtcagagatcttctatggctggatgaagaagcaatggaacaaggagtatctgactatatcaaa-ggcctcggtgatgcttttggtatgggcttcactgatgcagtgtccagggaggtggaggcattgaagaaccatttaattggttcagaaggagctgttgagaggatcctgaagaacttggtaaagctaatttcagctttagtcatagtcgttaggagtgactatggcatggtcaccctcacagctacgcttgccttgattgggtgtcatggaagcccttgggcatggatcaaagcgaagacagcctctattcttggtattccaatagtgcaaaaacagagcgcttcatggctaaagaagtttaacgatatggctaacgctgcaaaagggctcgagtggatctccagtaaaatcagcaagttcattgattggctaaaggaaaagattatcccggctgctaaggagaaggttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccagatctcaaatcttgaacagtctgctgcctcgcaagaggatttagaagctatgtttggtaatgtgtcatatttagccca---------cttctgccgcaagtttcagccactctacgcggctgaagccaaaagagtctatgccttagagagaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattattagaggttctccaggaacaggtaagtcacttgctacgggcatcatagctagagctattgctgacaagtaccattctagcgtttactcactccccccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcagaacccagatggtaaggacatgtctttattttgccaaatggtttctacagtggactttataccacccatggcatcactggaagagaaaggagtgtctttcacctctaagtttgtcattgcatcaaccaatgctagcaatattgtagttcctacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggccgacttgatgcaggtagggccgctaaactttgcactgaaaacaacaccgctaacttcaagagatgcagtccactagtgtgtggcaaggccattcaactaagggataggaagtctaaagtgagatatagtattgatactgtagtgtcagagctaattagagagtataataataggtctgccattgggaataccatagaagccctcttccaaggaccccctaagttcaggcctataaggatt---agccttgaagaaaagccagccccagatgccatcagtgacctacttgctagtgtggatagcgaggaggttcgacaatactgt-agggaacaggggtggataattccagaaacaccgaccaatgtggaacgtcaccttaacagagcagtgttggtgatgcagtccatcgccaccgtagttgcagttgtgtctcttgtctatgtcatttataaattgtttgctgggtttcagggtgcttactctggtgcgcctaagcaggccctaaaaaaacccgtgctgagaacagccacagtccaaggaccgagcttagactttgccttatccctcctaaggcgcaacatcagacaggtgcaaaccgaccaaggacatttcactatgttaggggtgcgagatcgcctagccattttaccacgccactcgcaaccaggaaaaactatttgggtagagcacaagttaattaatgtgctggatgctgttgaattggtggatgagcagggtgtaaacttggaactcacactagtaaccttagataccaacgaaaagtttagggacgtcaccaagtttattccagagacaatcatcggggcaagtgacgcaaccttgatcatcaacactgagcacatgccctcgatgttcgttccagtgggtgatgttgtacaatatggatttctgaatctcagtggtaagcccacacaccgaaccatggtgtacaatttccccacaaaggcaggacagtgtggaggtgtggttacctcagtcggcaagatcattggaattcacattggtggggatggacgccaaggcttctgtgctggactgaagagaagttactttgccagtgagcaaggagagattcaatggatgaagtccaataaagaaactgggagactaaacattaatggcccaactcgtaccaaattggagcccagcgtgttccatgatgtgtttgagggcaataaggaaccggcggtcttaaccagtaaggatcccagactcgaggttgattttgagcaagctttgttttccaagtatgtaggaaacaccctgcatgagcctgacgagtatgtaacacaggctgctctccactatgcaaatcagctaaagcaattagatataaacattaataaaatgagcatggaggaagcatgctatggcactgaatacctggaggccatagatctgcacactagtgccgggtacccctatagcgccttgggtgtcaagaaaagagacatacttgacccagtcactagagataccaccaaaatgaaattctacatggataaatatggattagacttgccctattccacctatgtgaaggatgagcttagatccttagacaagattaagaaagggaaatcccgcttgattgaagccagcagtctgaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccggggactgtgaccgggtctgcagtagggtgcaatcctgatgtgttctggagcaaactaccgatcctgttgccaggatcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaagtggttctccgagagatcggttactcagaggaagctgtgtcattaatagaagggatcaaccacacccaccatgtgtatcggaacaggacatattgtgttcttggtggaatgccctcaggctgttccggtacttccatcttcaattccatgatcaataacataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgagttgaatatggtggcttatggggatgatgtattagctagctatccgttccctattgactgctcggagttagccaaaactggtaaagagtatggattgacaatgacacccgctgacaagtcaccctgcttcaacgaagttacctgggaaaatgctacattcttaaagagaggcttcctgccagattatcaattcccattccttatccaccctaccatgcccatgagggagatccatgaatccattcgttggactaaagacgcacgcaacactcaagaccacgtgcgctctctgtgcctcttagcatggcataatgggaaggaggagtatgagaaatttgtgagtgcaattagatcagttcctattggaaaagccttggctataccaaattttgagaacttaagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagca-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617100.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_B_CF166109_FRA_2010
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccat-t-gggcgctagcacactgactttgcggagtctttgtgcgcct-g-ttttata-----accct---t---cccc-c-----aagta-gcaacttagaagt------------attgcacaaccgc-ggccag-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtagcaccttggaagttgcagagtgtttcgctcagca--ctt-tcccc---gtgtagatcaggtcgatgagccactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacaccctcaatcca-ggggg-cggtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcctttactggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtc-----tacttg----tttatt-ggatacgtccctc-----ttaatct--------------caaggtcattcga-actcttgattatatattgctccttaa--ttatagga-----aatggggtcacaagtctccactcagcgatccgggtcacatgagaactcgaactctgcatcgg-agggctcgaccataaattacacaactataaattactacaaggatgcatacgctgcaagtgcggggcgccaggacatgtcccaggacccgaagaaatttaccgaccctgtcatggacgttatgcatgagatggccccaccgctcaagtctccaagtgctgaggcatgtggttacagtgatcgtgtggctcagctcaccattgggaactccaccattacgacacaggaagcggctaatatagttatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaagcccacacggcccgacgtgtcagtgaatagattcttcacattagacactaaatcttgggccaagg------------------attcaaagggatggtattggaagttccctgatgttctgacagaagtaggtgtttttggtcaaaacgctcagttccattacttgtaccgatctggattttgcgtgcacgtccagtgtaatgcaagtaagtttcaccagggcgctttactggtggctgtgctgcccgagtacgtactcggcactatcgcaggtgggactgggaatg------aaaattctcatcctccctacgccaccacacagcctggccaggttggtgcagttttaacgcacccttatgtgttggatgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaaccaataattgtgcaaccatcatagttccatacatgaatacagtcccttttgactcagctctcaaccactgcaactttggtctactggttatcccggtggtaccattggatttcaatgcaggtgccacatctgaaattcccattacagtcactatagctcctatgtgtgcggaatttgcgggtctgcgccaagcagtaaagcaaggcataccgacagaactcaaacctggtaccaaccaattccttaccactgatgatggtgtttctgcgccaattctgccaggtttccatccaactccacctatacacataccaggggaagtacataatctattggaaatatgcagagtggaaactatcctggaagttaacaa----------tctaaagaccaatgaaaccaccccc------atgcagcgcttgtgcttcccagtgtcggtacagagca------agactggtgagttatgcgctgcctttagagcagaccctggaagagacggtccatggcagtctacaatactgggccaactttgtaggtactatacccagtggtcaggttcattggaggtgacattcatgtttgcaggctcgttcatggctacaggtaagatgctcatcgcctacaccccacctgggggaaatgtgcctgcagacagaatcacagcaatgctaggcacgcatgtgatttgggatttcggactacagtcttctgtgacgttggttgtaccgtggatcagcaatacacactatagggcacatgctcgtgctggatactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtggtacccattggtgctcctaccacagcatatatcgtggccttggcagcagcccaggacaacttcactatgaaactatgcaaagacacagaggacattgagcagacagctaatatacaaggggattct--------attgcagacatgattg---accagactgt--------------------------gaataatcaagtgaatcgctctttaactgcattgcaagtaatg--------cccacagctgccaatactgaagcaagtagtcacagactaggcaccggcgttgtaccagcgctacaagccgcggagacaggggcgtcatctaatgctagtgacaagaacctcattgagactaggtgtgtgctgaaccatcactccacacaggagacagccatagggaatttctttagtcgtgctggtttggtcagcatcattacaatgcccaccacaggcacaca-aaatacagatggttatgttaactgggacattgatttaatggggtatgctcagctgcggcggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacatttgttgtggctaaacctaatggtgagctagtcccccaattgctacagtacatgtatgtcccaccaggggctccgaaacccacttccagagattcatttgcttggcagactgccaccaacccatctgtatttgttaagatgacggacccaccagctcaagtgtcagtcccctttatgtcaccagccagtgcgtaccaatggttttatgatggttatcccacctttggagagcatctccaagcaaatgacctagattatggtcaatgcccgaataacatgatgggcacttttagtgtcaggacagtaggggctgagaaatcaccacattctatcacactgagggtatacatgaggattaagcacgtcagggcgtggatcccaaggcctctgagaaatcaaccctatttgtttaagactaacccaaattataaaggaaa----tgacattaagtgtaccagcactagcagagacaagat---aacaac---------------------------------------attgggg------------------------------------------aagtttgggcagcaatcaggtgccatatatgtgggcaattatagggtagtgaaccggcaccttgccacacacaatgactgggcaaatcttgtgtgggaggacagttctagggacctgttagtctcttccaccaccgcccaggggtgcgataccatcgctaggtgcaattgccaaaccggagtatactattgcagttccaaaaggaaacattacccggttagtttcaccaagcccagtctggtatttgtggaagctagtgagtactacccagctaggtatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccaacacggtgtagtaggaattgtctccactggtggaaatggccttgtggggtttgctgatgtcagggatcttctgtggctggatgaggaagcaatggagcaaggagtatctgactacatcaga-ggcctcggtgatgccttcggtatgggtttcactgatgctgtgtccagggaagtagaagcattgaagaaccatttaattggctcggaaggagctgttgagaaaatccttaagaacttggtgaagctaatctcagctttggtcatagtcgttaggagtgattatgacgtggtcaccctcacagctacacttgccttaattgggtgtcatggaagcccttgggcatggattaaagcgaagacagcctccattcttggcattccaatagtgcaaaaacagagcgcttcatggttaaagaagtttaatgatatggctaatgccgcaaaagggcttgagtggatttctagcaaaatcagcaagttcattgattggctcaaggaaaagattatcccggccgctaaagagaaggttgaattcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatttctaatctagaacagtctgctgcttcgcaagaggacctagaagccatgtttggtaatgtgtcatatttagccca---------cttctgccgtaagtttcagccactttacgcgactgaagccaaaagagtctacgctctggagagaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtgtgcttgatcattagaggctctccagggacgggtaagtcacttgctacgggcattatagctagagccattgctgacaaataccattctagcgtctactcactccctccagatccagaccatttcgatggatataagcaacaggtagtcactgttatggatgatctttgtcaaaacccagatggaaaagacatgtctttattttgccagatggtttccacagtggattttataccacccatggcttcactggaagagaagggagtgtctttcacctctaagtttgttatcgcatcaaccaatgccagcaatattgtggttcctacagtttcagattcagatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggccgactcgacgcaggtagggccgctaagctttgcacagaaaacaatactgctaacttcaagaggtgcagcccactagtgtgtggtaaagccattcaattgagagataggaagtccaaagtgagatatagcattgatactgtagtgtcagagctaatcagagagtataataataggtctgccatcggtaacaccatagaagccctcttccaaggaccccctaaattcaggcctataaagatt---agtcttgaagagaggccggctccagatgccatcagtgacctgcttgctagtgtggacagtgaggaggttcgacaatactgc-agggaacaggggtggataatcccagaaacaccgaccaatgtggaacgccacctcaacagagcagtgttggtgatgcagtccatcgccactgtggttgcagttgtgtctcttgtctatgttatttacaaattgtttgctgggtttcagggtgcttattctggtgcgcccaagcaagctctaaaaaaacccgtgctaagaacagccacggttcaaggaccgagtttagattttgccttgtcccttctaaggcgcaacatcagacaggtacaaaccgatcaagggcatttcactatgttaggagtgcgagatcgcctagccattttgccgcgtcactcacaaccagggaaaaccatttgggtggagcacaagttaattaatgtgctggatgctgttgagttggtggatgagcagggtgtaaacttggagctcacactagtgaccttagataccaacgaaaagtttagggatatcaccaagtttataccggaaacgatcactggggcaagcgacgcgaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatacggattcctgaatctcagcggtaagcccacacaccggaccatgatgtacaatttccccactaaggcaggacagtgtggcggggtagtcacctcagtcggcaagatcattggtattcacattggtgggaatggacgccaaggtttctgcgctggactgaagaggggttactttgccagtgaacagggagagatccaatgggtgaagtctaataaagaaactgggaggctaaacattaatggtccaacccgtaccaaattggagcctagtgtgttccatgatgtgtttgagggcaacaaagagccagcagtcttaaccagtaaggatcccagactcgaggttgactttgagcaagctttgttttccaagtacgtggggaacaccctacacgagcctgacgagtacgtaacacaagctgctctccactatgcaaatcagctaaagcaattagacataaacactaataagatgagcatggaggaagcatgttatggtactgaatacttggaggccatagatctgcacaccagtgccgggtacccctatagtgccttgggtgttaagaaaagagatatacttgacccaatcactagagacactaccaaaatgaaatactacatggacaaatatgggttagatttgccctattccacctatgtgaaagatgagctcagatctttggacaagattaagaaagggaaatcccgcttgattgaggccagtagccttaacgactcagtctaccttaggatgactttcgggcacctctacgaaacttttcatgccaacccggggactgtgaccgggtctgcagtagggtgcaatcccgatgtgttctggagcaaactaccgatcttactgccagggtcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctctagaggtggttcttcgggagattggctactcagaggaggccgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtccttggtggaatgccttcaggctgttccggtacttccatcttcaattccatgattaataatataataatcagaactctcttgattaaaacttttaaagggatcgatctggatgagttgaatatggtagcttatggagatgatgtgttagctagctatccgttccccattgactgcttagagttagccaagactggcaaagggtatggactgacaatgacacccgccgacaagtcaccttgttttaacgaagttacctgggaaaatgccacattcttaaagagaggcttcctaccagatcatcaattcccattcctcatccaccccactatgcccatgagggaaatccacgagtccattcgctggactaaagacgcacgcaacactcaagatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaagagtatgagaaatttgtgagcacaattagatcagttcctattggaaaagccttagctataccaaatttcgagaacttgagaaggaattggctcgagttatttt--a--gtatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746668.1_Human_coxsackievirus_A16_isolate_PM-1651402-06_complete_genome
---------------------------ag-cct-gtgggttg-t-tcccacccaca-gggcccat-t-gggcgctagcacactggttttgcggaatctttgtgcgcct-g-ttttata-----accct---t---cccc-c-----aagca-gcaacttagaagt------------attgcacaatcac-ggccag-tagtgggcgtggcgcgccagccacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcggaaaacc-tagtagcaccttgaaagttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacaccctcaaccca-ggggg-cggtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atccct-tactggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----tactta----tttatt-ggatacgtccctc-----ttaatct--------------taaggctattcaa-actcttaattatatattgctccttaa--ctataaga-----aatggggtcacaagtttccactcagcgatccgggtcgcatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaattactacaaggatgcgtacgctgcaagtgcgggtcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatgcatgagatggccccaccgcttaagtctccaagcgctgaggcatgtggttacagtgatcgtgtggctcagctcactattgggaactctaccattacgacacaggaagcagctaacatagttatagcctatggggagtggcctgagtactgcccagacacagatgcgacggcagtcgacaaacccacacgacctgacgtgtcagtgaacagattcttcacgctggacactaaatcttgggccaaag------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcagttccactacttgtaccgatctggattttgcgtgcacgtccagtgtaacgcaagtaagtttcaccaaggcgctttactggtggctgtgctgcccgagtacgtactcggtactatcgcaggtgggactgggaatg------aaaattctcatcctccctacgccactacacagcctggccaggttggagcagttttaacgcacccttacgtgttagatgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaacttaagaaccaataattgtgcaaccatcatagttccgtacatgaacacagtcccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtaccgttggatttcaatgcaggcgccacatctgaaattcccattacagtcactatagctcccatgtgtgcggagtttgcgggtctgcgccaggcagtaaagcaaggcataccaacagaacttaaacctggcaccaatcaattccttactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccacctatacacataccaggggaagtacataatctattggaaatatgcagagtggaaaccatcctggaagttaacaa----------tctaaagaccaatgaaaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaaccggtgaattatgcgctgcctttagagcagaccctggaagagatggtccgtggcaatctacaatactgggccaactctgcaggtactacacccagtggtcaggatcattggaggtgacattcatgtttgcaggctcgtttatggctacaggtaagatgctcatcgcctacaccccacctgggggaaacgtgcctgcggacagaattacagcaatgctaggcacgcatgtgatctgggatttcggattgcagtcttctgtgacgttggtcgtgccgtggatcagtaatacacactatagggcacatgctcgtgctgggtactttgactattacaccactggcatcataaccatatggtatcaaactaactatgtggtacccattggtgctcccactacagcgtatatcgtagctttggcagcagcccaagacaacttcactatgaaactatgcaaagacacagaggacattgagcagacagctaatatacaaggggatccc--------atcgcagacatgatcg---accagaccgt--------------------------gaacaatcaagtgaaccgctccttaactgcattgcaagtatta--------cccacagctgccaatactgaagcaagtagtcacagattaggcactggcgttgtaccagcgctacaagccgcggagacaggggcgtcgtctaatgctagtgacaagaacctcattgagactaggtgtgtgctaaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggtcagcattattacaatgcccaccacaggtacaca-gaatacagacggttatgttaactgggatattgatttaatgggatatgctcagctgcggcggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacatttgtcgtagctaaacctaatggtgagctagtcccccaattattacagtacatgtatgtcccaccaggggctccgaaacccacttccagagattcgtttgcttggcagaccgccaccaacccgtctgtgtttgtgaagatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttatgatggttatcccaccttcggggagcatctccaagcaaatgacctagactatggtcaatgcccgaataacatgatgggcacttttagtgttaggacagtaggggctgagaagtcaccacactccattacactgagagtatacatgaggatcaaacacgtcagggcgtggatcccaaggcctctgagaaatcaaccctatttgtttaagactaacccaaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaaaat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtgggcaactatagggtagtgaaccggcaccttgccacacacaatgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacaccatcgctaggtgcaattgccaaaccggagtatactattgcagctccaaaaggaaacactacccggttagtttcaccaagcccagcctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgctcgctgtgggtcactcggaacctggtgactgtggtggcatccttaggtgtcaacacggtgtagtaggaattgtctccactggtggaagtggtcttgtggggtttgctgatgtcagagatcttctgtggctggatgaggaagcaatggaacagggggtatctgactacatcaaa-ggcctcggtgatgcttttggtgtgggtttcactgatgcagtgtccagggaagtagaagcattgaagaaccatttaattggctcagaaggagccgttgagaagatcctgaagaatttggtgaagctgatctcagctttggtcatagtcgttaggagtgattacgacgtggtcaccctcacagctacacttgccttgattgggtgccatggaagcccctgggcatggatcaaagcgaagactgcctccattcttggcattcccatagtgcaaaaacagagcgcttcatggttaaaaaaatttaatgatatggctaacgctgcaaaagggcttgagtggatttctagcaaaatcagcaagtttattgattggcttaaggaaaagattattccggccgctaaggagaaggttgagttcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatttctaatcttgaacagtctgctgcttcgcaagaggacctagaagccatgtttggtaatgtgtcatatttagccca---------cttctgccgtaagtttcagccactttacgcggctgaagccaaaagagtctatgctctagagagaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattagaggctctccagggacgggtaagtcacttgctacgggcatcatagctagagccattgctgacaaataccattctagcgtttactcactccctccagatccagaccatttcgatggatataagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtctttattttgccagatggtttctacagtggattttataccacccatggcttcactggaagagaaaggagtgtctttcacctctaagtttgtcattgcatcaaccaatgctagcaatattgtggtccctacagtttcagattcagatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacagaccttggtcgactcgacgcaggtagggccgctaagctttgtacagaaaacaacaccgctaacttcaagagatgcagcccactagtgtgtggcaaagccattcaactgagagacaggaagtccaaagtgcgatatagcattgacactgtagtgtcagagctaatcagagagtataataatagatctgccatcggtaacaccatagaagccctcttccaaggaccccctaagttcaggcctataaagatt---agtcttgaagagaggccggctccagatgccatcagtgacctacttgctagtgtggacagtgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccaaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccactgtggttgcagttgtgtctcttgtctatgttatttataaattgtttgctgggtttcagggtgcttattctggtgcgcctaagcaagctctcaaaaaacccgtgttaagaacagccacagtccaaggaccgagtttagatttcgccttgtctctcctaaggcgcaacatcagacaggtacaaaccgatcaaggacatttcactatgttaggagtacgagatcgcctagccattttaccgcgccactcacaaccagggaaaactatttgggtggagcacaagttaattaatgtgctggatgctgttgagttggtggatgagcaaggtgtaaacttagaactcacactagtaaccttagacaccaacgaaaagtttagggatgtcaccaagtttattccggagacgatcaccggggcaagtgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatggattcctgaatctcagcggtaagcccacacaccggaccatgatgtataacttccccactaaggcaggacagtgtggcggggtagtcacctcagttggcaagatcattggtattcacatcggtgggaatggacgccaaggcttctgcgctggactgaagaggggttactttgccagtgaacaaggagagatccaatgggtgaagtccaataaagaaactgggaggctgaacattaatggcccaacccgtaccaaattggagcccagtgtgttccatgatgtgtttgagggcaacaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgactttgagcaagctttgttttccaagtacgtggggaacaccctacacgagcctgacgagtacgtaacacaggctgctctccactatgcaaatcagctaaagcaattagacataaacactaataagatgagcatggaggaagcatgttatggtactgaatacttggaggccatagatttgcacaccagtgccgggtacccctatagtgccttgggtgttaagaaaagagacatacttgacccaatcactagagacactaccaaaatgaaatactacatggataaatatgggttagatttgccctattccacctatgtgaaagatgagcttagatctttggataagattaagaaagggaaatcccgcttgattgaggccagtagcctgaacgattcagtctatcttaggatgactttcgggcacctctacgaaacttttcatgccaacccggggactgtgaccgggtctgcagtagggtgcaatcccgatgtgttctggagcaaactaccgatcttactaccagggtcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagattggctactcagaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtcctcggtggaatgccttcaggttgttccggtacttccatcttcaattccatgattaataatataataatcagaactctcttgattaaaacttttaaggggatcgatttagatgagttgaatatggtagcttatggagatgatgtgttagctagctatccgttccccattgactgcttagagttggccaaaactggcaaagagtatggactgacaatgacacccgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacatttttaaagagaggcttcttgccagatcatcaatttccattccttatccaccctactatgcccatgagggaaatccacgagtccattcgttggactaaagacgcacgcagtactcaggatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaagaatatgagaaatttgtgagtacaattagatcagttcctattggaaaagccttagctataccaaatttcgagaacttgagaaggaattggcttgagttatttt--a--gtatacagttc-------------------------aaag---------------ctgaaccc-caccagaa----atctg----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746672.1_Human_coxsackievirus_A16_isolate_PM-1795457-07_complete_genome
-------------------------------ct-gtgggttg-t-tcccacccaca-gggcccat-t-gggcgctagcacactggttttgcggaatctttgtgcgcct-g-ttttata-----accct---t---cccc-t-----aagca-gcaacttagaagt------------attgcacaatcac-ggccag-tagtgggcgtggcgcgccagccacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcggaaaacc-tagtagcaccttgaaagttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacaccctcaaccca-ggggg-cggtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-tactggctgcttatggtgacaattgaa-------aagttgttgccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----tactta----tttatt-ggatacgtccctc-----ttaatct--------------taaggctactcaa-actcttaattatatattgctccttaa--ctataaga-----aatggggtcacaagtttccactcagcgatccgggtcgcatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaattactacaaggatgcgtacgctgcaagtgcgggtcgccaggatatgtcccaagacccgaagaaatttaccgaccctgtcatggacgttatgcatgagatggccccaccgcttaagtctccaagcgctgaggcatgtggttacagtgatcgtgtggctcagctcactattgggaattctaccattacgacacaggaagcagctaacatagttatagcatatggggagtggcctgagtactgcccagacacagatgcgacggcagtcgacaaacccacacgacctgatgtgtcagtgaacagattcttcacgctggacactaaatcttgggccaaag------------------attcaaagggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcagttccactacttgtaccgatctggattttgcgtgcacgtccagtgtaacgcaagcaagtttcaccaaggcgctttactggtggctgtgctgcccgagtacgtactcggtactatcgcaggcgggactgggaatg------aaaattctcatcctccctacgccactacacagcctggccaggttggagcagttttaacgcacccttacgtgttagatgcagggatccctttgagccaattaactgtgtgcccacatcagtggattaatttaagaaccaataattgtgcaactatcatagttccgtacatgaacacagtcccttttgactcagctctcaaccactgcaactttggtctactggtcatcccggtggtaccgttggatttcaatgcaggcgccacatctgaaattcccattacagtcactatagctcccatgtgcgcggagtttgcgggtctgcgccaggcagtaaagcaaggcataccaacagaacttaagcctggcaccaatcaattcctcactactgatgatggtgtttccgcaccaattctgccaggtttccatccaactccacctatacacataccaggggaagtacataatctattggaaatatgcagagtggaaaccatcctggaagttaacaa----------tctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcggtgcagagca------aaaccggtgaattatgcgctgcctttagagcagaccctggaagagatggtccgtggcagtctacaatattgggccaactctgcaggtactacacccagtggtcaggatcattggaggtgacattcatgtttgcaggctcgtttatggctacaggtaagatgctcatcgcctacaccccacctgggggaaacgtgcctgcggacagaattacagcaatgctaggcacgcatgtgatctgggatttcggattacagtcttctgtgacgttggtcgtaccgtggatcagtaatacacactatagagcacatgctcgtgctgggtactttgactattacaccactggtatcataaccatatggtatcaaactaactatgtggtacccattggtgctcccactacagcgtatatcgtggctttggcagcagcccaagacaacttcactatgaaactatgcaaagacacagaggacattgagcagacagccaatatacaaggggatccc--------atcgcagacatgattg---accagaccgt--------------------------gaacaatcaagtgaaccgctccttaactgcattgcaagtattg--------cccacagctgccaatactgaagcaagtagtcacagattaggcactggcgttgtaccagcgctacaagccgcagagacaggggcgtcgtctaatgctagtgacaagaacctcattgagactaggtgtgtgctaaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttggtcagcattattacaatgcccaccacaggtacaca-gaatacagacggttatgttaactgggatattgatttaatgggatatgctcagctgcgacggaaatgcgagttgtttacctacatgcgctttgatgctgaattcacatttgtcgtagctaaacctaatggtgagctagtcccccaattattacagtacatgtatgtcccaccaggggctccgaaacccacttccagagattcgtttgcttggcagaccgccaccaacccgtctgtgtttgtgaagatgacggacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttatgatggttatcccaccttcggagagcatctccaagcaaatgacctagactatggtcaatgcccgaataacatgatgggcacttttagtgttaggacagtaggggctgagaagtcaccacactccattacactaagagtatacatgaggattaaacacgtcagggcatggatcccaaggcctctgagaaatcaaccctatttgtttaagactaacccaaattataaaggaaa----tgatattaagtgtaccagcactagtagagataaaat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcgggtgccatatatgtgggcaactatagggtagtgaaccggcaccttgccacacacaatgactgggcaaaccttgtgtgggaggacagctctagggacctgttagtctcttccaccaccgcccaggggtgcgacaccatcgctaggtgcaattgccaaaccggagtatactattgcagctccaaaaggaagcactacccggttagtttcaccaagcccagcctaatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgctcgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccaacacggtgtagtaggaattgtctccactggtggaagtggtctcgtggggtttgctgatgtcagagatcttctgtggctggatgaggaagcaatggaacagggggtatctgactacatcaaa-ggcctcggtgatgcttttggtatgggtttcactgatgcagtgtccagggaagtggaagcattgaagaaccatttaattggctcagaaggagccgttgagaagatcctgaagaacttggtgaagctgatctcagctttggtcatagtcgttaggagtgattacgacgtggtcaccctcacagctacacttgccttgattgggtgccatggaagcccctgggcatggatcaaagcgaagactgcctccattcttggcattcccatagtgcaaaaacagagcgcttcatggttaaaaaaatttaatgatatggctaacgctgcaaaagggcttgagtggatttctagcaaaatcagcaagtttattgattggcttaaggaaaagattattccggccgctaaggagaaggttgagttcttaaacaacctgaagcagcttccc-ttgttggagaaccaaatttctaatcttgaacagtctgctgcttcgcaagaggacctagaagccatgtttggtaatgtgtcatatttagccca---------cttctgccgtaagtttcagccactttacgcgactgaagccaaaagagtctatgctctagagagaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgattattagaggctctccaggaacgggtaagtcacttgctacgggcatcatagctagagccattgctgacaaataccattctagcgtttactcactccctccagatccagaccacttcgatggatataagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaggacatgtctttattttgccagatggtttctacagtggattttataccacccatggcttcactggaagagaaaggagtgtctttcacctctaagtttgtcattgcatcaaccaatgctagcaatattgtagtccctacagtttcagattcagatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcctacaagacggaccttggtcgactcgacgcaggtagggccgctaagctttgtacagaaaacaacaccgctaacttcaagagatgcagcccactagtgtgtggcaaagccattcaactgagagacaggaagtccaaagtgcgatatagcattgacactgtagtgtcagagctaatcagagagtataataataggtctgccatcggtaacaccatagaagccctcttccaaggaccccctaagttcaggcctataaagatt---agtcttgaagagaggccggctccagatgccatcagtgacctacttgctagtgtggacagtgaggaggttcgacaatactgc-agggaacaggggtggataattccagaaacaccaaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccactgtggttgcagttgtgtctcttgtctatgttatttataaattgtttgctgggtttcagggtgcttattctggtgcgcctaagcaagctctcaaaaagcccgtgttaagaacagccacagtccaaggaccgagtttagattttgccttgtctctcctaaggcgcaatatcagacaggtacaaaccgatcaaggacatttcactatgttaggagtacgagatcgcctagccattttaccgcgtcactcacaaccagggaaaactatttgggtggagcacaagttaattaatgtgctggatgctgttgagttggtggatgagcaaggtgtaaacttagaactcacactagtaaccttagacaccaacgaaaagtttagggacgtcaccaagtttattccggagacgatcaccggggcaagtgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacaatatggattcctgaatctcagcggtaagcccacacaccggaccatgatgtataatttccccactaaggcaggacagtgtggcggggtagtcacctcagttggcaagatcattggtattcacatcggtgggaatggacgccaaggtttctgcgctggactgaagaggggttactttgccagtgaacaaggggagatccaatgggtgaagtccaataaagaaactgggaggctaaacattaatggcccaacccgtaccaaattggagcccagtgtgttccatgatgtgtttgagggcaacaaagaaccagcagtcttaaccagtaaggatcccagactcgaggttgacttcgagcaagctttgttttccaagtacgtggggaacaccctgcacgagcctgacgagtacgtaacacaggctgctctccactatgcaaatcagctaaagcaattagacataaacactaataagatgagcatggaggaagcatgttatggcactgaatacttggaggccatagatttgcacaccagtgccgggtacccctatagtgccttgggtgttaagaaaagagacatacttgacccaatcactagagacactaccaaaatgaaatactacatggataaatatgggttagatttgccctattccacctatgtgaaagatgagcttagatctttggacaagattaagaaagggaaatcccgcttgattgaggccagtagcctgaacgattcagtctatcttaggatgactttcgggcacctctacgaaacttttcatgccaacccggggactgtgaccgggtctgcagtagggtgcaatcccgatgtgttctggagcaaactaccgatcttactgccagggtcgctctttgcatttgattattcagggtacgatgcaagtctcagcccagtgtggtttagagctttagaggtggttctccgagagattggctactcagaggaggctgtgtcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgtcctcggtggaatgccttcaggttgttccggtacttccattttcaattccatgattaataatataataatcagaactctcttgattaaaacctttaaagggatcgatttagatgagttgaatatggtagcttacggagatgatgtgttagctagctatccgttccccattgactgcttagagttagccaaaactggcaaagggtatggactgacaatgacacccgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcatcaatttccattccttatccaccctactatgcccatgagggaaatccacgagtccattcgttggactaaagacgcacgcagtactcaggatcacgtgcgctctttgtgcctcttagcatggcataatgggaaggaagaatatgagaaatttgtgagtacaattagatcagttcctattggaaaagccttagctataccaaatttcgagaacttgagaaggaattggctcgagttatttt--a--gtatacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----cgttaat-g-actg--------gtgggggtaaatttgt-ta-t-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617104.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_B_CF223065_FRA_2011
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccat-t-gggcgctagcacactgattttgcggaatctttgtgcgcct-g-ttttata-----accct---t---cccc-c-----aagca-gcaacctagaagt------------attgcacaatcgc-ggccag-tagtgggcgtgacgcgccagtcacgtcttgg-tcaagcacttctg-tatccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaaacc-tagtaacaccttgaaagttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgta-aaccccacgggcgaccgtgacagtggctgcgctggcggcctgcccat--------ggggaaa-cccatgggacgctctaatacagacatggtgtg-aagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacaccctcaaccca-ggggg-cagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgaccgtgtttcc--tttt---attcct-cattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccacccgg--tgtctaacagagctattgtt-----taccta----tttatt-ggatacgtccctc-----ttaattt--------------caaggctatccaa-actcttgattatatattgctccttaa--ttataaga-----aatggggtcacaagtctccactcagcgatctgggtcacatgagaactcaaactctgcatcgg-agggctcgaccataaattacacaactataaattactataaggatgcatacgctgcaagtgcggggcgccaggatatgtcccaggacccgaagaaatttaccgaccctgtcatggacgttatgcatgagatggccccaccgcttaagtctccaagcgctgaagcatgtggttacagtgatcgtgtggctcagctcaccattgggaactctaccatcacgacacaggaagcggctaatatagtcatagcctatggggagtggcctgagtactgcccagacacagatgcaacggcagtcgacaagcccacacggcctgatgtgtcagtaaacagattcttcacgctagacaccaaatcttgggccaaag------------------attcaaaaggatggtattggaaattccctgatgttttgacagaagtaggtgtttttggtcaaaacgctcagttccactacttgtaccgatctggcttttgcgtgcacgtccagtgcaatgcaagtaaattccaccaaggcgctctattggtggctgtgctgcccgagtacgtactcggtactattgcaggtgggactgggaatg------aaaattctcatcctccctacgccaccacacagcctggtcaggttggcgcagttttaacgcacccttacgtgttagatgcagggatccctttgagtcaattaactgtgtgcccacatcagtggattaacttaagaaccaataattgcgcaaccatcatagttccgtacatgaatacagtcccttttgattcagctctcaaccattgcaactttggtctcctggttatcccggtagtaccattggatttcaatgcaggcgccacatctgaaattcccattacagtcactatagctcctatgtgtgcagaatttgcgggcctgcgccaggcagtgaaacaaggcataccaacagaactcaaacctggtaccaatcaattccttactactgatgacggtgtttctgcaccaattttgccaggtttccatccaactccacctatacacataccaggagaagtgcgtaatctattggaaatatgcagagtggaaaccatcctggaagttaataa----------tctaaagaccaatgagaccaccccc------atgcagcgcttgtgctttccagtgtcagtgcagagta------agactggtgaattatgtgctgcctttagagcagaccctggaagagatggtccgtggcagtctacaatactgggccaactttgcaggtactacacccagtggtcaggttcattggaggtgacattcatgtttgcaggctcgtttatggctacaggtaagatgctcatcgcctacaccccacctggggggaatgtgcctgcagacagaatcacagcaatgctaggcacgcatgtgatctgggatttcggattacagtcttctgtgacgttggtcgtaccatggatcagtaatacacactatagggcacatgctcgtgctgggtactttgattattacaccactggcatcataacaatatggtatcaaactaactatgtggtgcctattggtgctcccactacagcgtatatcgtggccttggcagcagcccaggacaacttcactatgaaattatgcaaagatacagaagacattgagcagacagctaatatacaaggggattct--------attgcagacatgattg---atcagactgt--------------------------gaataaccaagtgaatcgctctctaactgcattgcaagtattg--------cccacagctgccaatactgaagcaagtagtcacagattaggcactggcgttgtaccagcgctacaagccgcggagacaggggcgtcgtctaatgccagtgacaagaacctcattgagactaggtgtgtgctgaaccatcactccacacaggagacagccattgggaatttctttagccgtgctggtttagtcagcattattacaatgcccactacaggtacaca-gaatacagatggttatgttaactgggacattgatttaatgggatatgcccagctgcggcggaagtgcgagttgttcacctacatgcgctttgatgctgaattcacatttgtcgtggctaaacctaatggtgagctggtcccccaattactacagtacatgtatgtcccaccaggggctccgaaacccacttccagggattcatttgcttggcagactgccaccaacccatctgtgtttgttaagatgacagacccaccagctcaagtgtcagtccccttcatgtcaccagccagtgcataccaatggttttatgatggttatcccacctttggagagcatctccaagcaaacgacctagattatggtcagtgcccgaacaacatgatgggcacttttagtgttaggacagtaggggctgagaaatcaccacactccattacactgagggtatacatgaggatcaaacacgttagggcatggatcccaaggcctctgagaaatcaaccctatttgtttaagactaacccaaactataaaggaaa----tgatattaagtgtaccagcactagtagggacaagat---aacgac---------------------------------------attggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtaggcaattatagggtagtgaatcggcaccttgccacgcataatgactgggcaaatcttgtgggggaggacagctctagggatctgttactctcttccaccaccgcccaggggtgcgataccatcgctaggtgcaattgccaaaccggagtatactactgcagctctaaaaggaaacattacccggttagcttcaccaagcccagcctgatatatgtggaagctagtgaatattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggagcctggtgactggggcggcatcctcaggtgccaacacggtgtagtaggaattgtctccaccggtggaaatggccttgtggggtttgctgatgtcagggatcttctgtggctggatgaggaagcaatggagcaaggagtatctgactacattaga-ggcctcggtgatgctttcggtatgggtttcactgatgcggtgtccagggaagtagaagcattgaagaaccatttaattggctcagaaggagccgtcgagaagatcctgaagaacttggtgaagctaatttcagctttggtcatagtcgttaggagtgattatgacgtggtcacccttacagctacacttgccttgattgggtgtcatggaagcccgtgggcatggatcaaagcaaagacagcctccattcttggcattcccatagtgcaaaaacagagtgcttcatggttaaagaagttgaatgatatggctaacgctgcaaaagggcttgagtggatttctagcaaaatcagcaagttcattgattggctcaaggaaaagattattccggccgctaaggagaaggttgagttcttaaacaacctgaagcagcttccc-ttattggagaaccaaatttctaaccttgaacagtctgctgcctcacaagaggacctagaggccatgtttggtaatgtgtcatatctagctca---------cttctgccgtaagtttcagccactttacgcaactgaagccaaaagagtctatgctctagagagaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctgatcattagaggctctccagggacgggtaagtcacttgctacgggcattatagctagagctattgctgacaaataccactctagcgtttactcactccctccagatccagaccatttcgatggatataagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatggaaaagacatgtctttattttgccagatggtttctacagtggattttataccacccatggcttcactggaagagaaaggagtgtccttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcctacagtttcagactcagatgcaattcgcaggcggttttatatggactgcgacatagaggtgacagattcctacaagacggacctcggccgactcgacgcaggtagggccgcaaagctttgcacagaaaacaacaccgccaactttaagagatgcagcccactagtgtgtggcaaagccattcaattgagagataggaagtccaaagtgagatatagcattgatactgtagtgtcagagctaatcagagagtataataataggtctgctatcggtaacaccatagaagccctcttccaaggaccccataagttcaggcccataaagatt---agtcttgaagagaagccagctccagatgccatcagtgacctgctcgctagtgtggacagtgaggaggtccgacaatactgc-agggaacaggggtggataattccagaaacaccgaccaatgtggaacgccacctcaacagagcagtgctggtgatgcaatccattgccactgtggttgcagttgtgtcccttgtctatgttatttataaattgtttgctgggtttcagggtgcttattctggtgcgcctaagcaagctcttaaaaaacctgtgctaagaacagctacagtccaaggaccgagtttagattttgccttatctcttctaaggcgtaacattagacaagtacaaaccgatcaaggacatttcactatgttaggagtgcgagatcgcctagccattttaccgcgccactcacaaccagggaaaactatttgggtggagcacaagttaattaatgtgctgcatgctgttgagttggtggatgagcagggtgtaaacttggaactcacactagtaaccttagacaccaacgaaaagtttagggatgtcaccaagtttattccggagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgaacacatgccctcaatgttcgttccagtgggtgatgttgtacaatacggatttctgaatctcagcggtaagcccacacaccggaccatgatgtacaatttccccactaaggcaggacagtgtggcggggtagtcacctcagtcggcaagatcattggcattcacattggtgggaatggacgccaaggtttctgtgctggactgaagaggggttactttgccagtgaacaaggagaaatccaatgggtaaagtctaataaagaaactgggaggctgaatattaatggcccaacccgcaccaaattggagcccagtgtgttccatgatgtgtttgagggcaacaaagagccagcagtcttgaccagtaaggaccccagactcgaggttgacttcgagcaagctttgttttccaagtacgtggggaacaccctacacgagcctgacgagtacgtaacacaggctgctctccactatgcaaatcagctaaagcaattagacataaacactaataagatgagcatggaggaggcatgttatggcactgaacacttggaggccatagatctgcacaccagtgccgggtacccatatagtgccttgggtgttaagaaaagagacatacttgacccaatcaccagagacaccagcaaaatgaaatactacatggacaaatatgggttggacttgccctattccacttatgtgaaagatgagcttagacctttggacaagatcaagaaagggaaatcccgcttgattgaggccagtagcctgaacgactcagtctaccttagaatgactttcggacacctctacgaaacttttcatgccaacccggggaccgtgaccgggtctgcagtagggtgtaatcccgatgtgttctggagcaaactaccgatattattgccaggatcgctctttgcatttgattattcagggtacgatgcaagcctcagcccagtgtggtttagagctctagaggtggttctccgagagattggctactcagaggaggccgtatcattaatagaagggatcaatcacacccatcatgtgtatcggaacaagacatattgtgttcttggtggaatgccttcaggctgttccggtacttccattttcaactccatgattaataatataataattagaactctcttgattaaaacttttaaagggatcgatctggatgagttgaacatggtagcttatggagatgatgtgttagctagctatccgttccccattgactgctcagagctagccaaaactggcaaagggtacggactgacaatgacacccgctgacaagtcactctgctttaatgaggtcacctgggaaaatgccacattcttaaagagaggcttcctgccagatcatcaattcccattccttatccaccctaccatgcctatgagggaaatccacgaatccattcgttggactaaagacgcacgcaacactcaggaccacgtgcgctctttgtgcctcctagcatggcacaatgggaaggaagagtatgagaaatttgtgagtgtaattagatcagttcctatcggaaaagccttggctataccaaatttcgagaacttgagaaggaattggcttgaattatttt--a--gtatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU163608.1_Coxsackievirus_A16_isolate_GDV126_complete_genome
-------------------taaaa--cag--ct-gtgggttg-c-acccactcaca-gggcctac-t-gggcgcaagcactctggtacctcggtacctttgtgcgcct-g-ttttata-----ccccc-------cccc-c-----ag--t-gaaacttagaagc------------agca---aaccac-gatcaa-tagcaggcatagcgctccagttatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagaccgc-tcgcgcggttgaaggagaaaacgttcgttatccggctaactacttcggaaaacc-tagtaacaccatgaaagttgcggagagcttcgttcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtaa-cccatggggcgctctaatacggacatggtgtg-aagagtctactgagctagttggtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgctcacaagcca-gcggg-tagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttatattggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagcaattatt-----taccta----tttatt-ggttttgtaccat-----taacctt--------------gaattctgtgacc-acccttaattatatcttgacccttaacacagctaaa-----catgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactg-agggttctaccataaactacactaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcggcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtagcgcagttaactattggcaactccaccatcactacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggacactaaattatgggagaaat------------------cgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccattacctctaccgatcaggattctgcatccacgtgcagtgcaatgccagtaaattccaccaaggagcactcctagtcgctgtcctaccagagtatgtcattgggacagtggcaggcggtacaggaacgg------aagatacccaccccccttacaagcagactcaacccggcgccgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggattaatttgaggaccaacaattgtgctacaataatagtgccatatattaacgcactgccttttgattctgccttgaaccattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacaccagtaatccctataactatcacattggccccaatgtgttctgaattcgcaggtcttaggcaggcagtcacgcaagggttccccaccgagctaaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgcatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccattctggaggttaacaa----------tgtacccacgaatgccactagctta------atggagagactgcgcttcccggtctcagcacaagcag------ggaaaggtgagctgtgtgcggtgtttagagccgaccctgggcgtaatggaccatggcaatccaccttactgggtcagttgtgcgggtactatacccaatggtcaggatcattggaagttaccttcatgtttactggatccttcatggctaccggcaagatgctcatagcctatacaccgccaggaggtcccctacccaaggaccgggcgaccgccatgttaggcacgcacgtcatctgggattttgggctgcaatcgtccgtcacccttgtaataccatggatcagtaatacacactacagagcacacgcccgcgctgggtactttgactattacaccactggcatcataaccatttggtatcaaactaactatgtcgtacccattggtgctcccactacagcatatatcgtggctttggcagcagctcaggataacttcactatgaaactgtgcaaggatacggaggacattgagcaaacggctaacatacaaggggatccc--------attgcagatatgattg---accaaactgt--------------------------aaacaatcaagtgaatcgctccttgactgcgttgcaagtacta--------cctacagctgccaacactgaggcaagcagtcacagattaggcactggtgttgtaccagcactgcaagccgcggagacaggggcgtcgtctaatgctagtgacaagaatctcattgagactagatgtgtgttgaaccatcactccacgcaagagacagccattgggaatttctttagccgtgctggtcttgtcagcatcatcacaatgcccaccacgggtacaca-gaatacagatggttatgttaattgggacattgatttgatgggatatgctcagctgcggcggaaatgcgagttatttacctacatgcgctttgatgctgaattcacatttgtcgtagccaaacccaatggtgagttagtcccccaattactgcagtacatgtatgtcccgccaggggctccgaaacctacttccagagattcgtttgcttggcagacagccaccaacccatctgtgtttgtgaaaatgacggacccgccagctcaagtgtcagtccccttcatgtcaccagctagtgcataccaatggttttatgatggttatcccaccttcggtgagcacctccaagcaaatgacctagattatggccaatgcccgaataatatgatgggcacttttagcattaggacagtagggactgagaagtcaccacactccattaccctgagggtatacatgagaatcaaacacgtcagggcatggatcccaagacctctgagaaaccaaccctatttgtttaagaccaacccaaattataaaggaaa----tgatattaagtgtaccagcactagtagagacaagat---aacaac---------------------------------------gctggga------------------------------------------aagtttggacagcaatcaggcgctatatatgtgggtaactatagggtggtgaatcgacaccttgccacacacaacgactggacaaaccttgtgtgggaggacagctctagggacttgttagtctcctccaccaccgcccaggggtgcgacaccatcgctaggtgcaattgtcaaaccggtgtatactattgcagctctaaaaggaaacactacccggttagtttcaccaagcccagtctgatatttgtggaagctagtgagtattacccagctagatatcaatcccatctcatgcttgctgtgggtcactcggaacctggtgactgtggtggcatcctcaggtgccagcatggtgtgataggaattgtctccactggtggaaatggtcttgtggggtttgccgatgtcagagaccttctatggctggatgaagaagcaatggagcagggagtgtctgactatatcaaa-ggcctcggtgacgcttttggtatgggcttcactgatgcagtgtctagggaagtagaggcattgaagaaccatttaattggctcagaaggggctgttgagaagatcttgaagaacttggtgaagctaatctcggctttagtcatagttgtcaggagtgactatgacatagtcaccctcacggctacgttagctctgattgggtgtcatggaagcccttgggcatggattaaagcaaagacagcctctattcttggtattcccatagtgcaaaaacagagcgcttcatggcttaagaagtttaatgacatggctaacgccgcgaaagggcttgagtggatttctagtaaaatcagcaagttcattgattggctcaaggaaaagatcatcccggccgctaaagagaaagttgaattcttaaacaacctgaaacagcttccc-ctattggagaaccaaatctcaaatcttgaacagtctgctgcctcgcaagaagatctagaagctatgtttggcaatgtgtcatatttagccca---------cttctgtcgcaagttccagccactctatgcggttgaagccaaaagagtttatgccttagagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaatcattagaggctccccaggaacaggtaaatcacttgctacgggcatcattgctagagctattgctgacaaatatcactctagcgtttactcactccctccagacccagaccattttgatggatacaagcaacaagtagtcactgttatggatgatctctgtcaaaacccagatgggaaggacatgtccctattttgccaaatggtttctacagtggactttataccacccatggcatcattggaagagaaaggagtgtctttcacctccaagtttgtcatcgcatcaaccaatgctagcaatattgtagttcccacagtttcagattctgatgcgattcgcaggcggttttatatggactgcgatatagaggtgacagactcttacaagacggaccttggccgactcgacgcaggcagggccgctaagctttgcacagagaacaacaccgctaactttaagagatgcagcccactagtgtgtggcaaggccattcaattaagagacaggaagtctaaagtgagatatagtattgacactgtggtgtcagagctaattagagagtataataataggtctgccattgggaacaccatagaagccctcttccaaggaccccctaagttcaggcctataagaatt---agccttgaagaaaagccggccccagatgccatcagtgacttacttgctagtgtggatagcgaggaggttcgacaatactgc-agggaacaagggtggataattccagaaacatcgaccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccattgccaccgtggttgcggttgtgtccctcgtctatgtcatttataaattgtttgctggatttcaaggtgcctattctggtgcacctaagcaaactctcaaaaagcctgtgctaaggacagccacagtccaaggaccgagcttagattttgccttgtccctcctaaggcgcaacatcagacaggtgcaaactgaccaaggacatttcactatgttaggagtgcgagatcgcctagccattttgccgcgccactcgcaaccaggaaaaactatttgggtggagcacaaattaatcaatgtgttagatgctgttgaattggtggatgagcaaggtgtaaatttggaactcacactagtaaccttggacaccaacgaaaaatttagagatgtcaccaagtttattccagagacgatcaccggggcaagcgacgcaaccttggtcatcaacactgagcacatgccctcaatgttcgttccagtgggtgatgttgtacagtatgggtttctaaatctcagcggtaagcccacacaccgaaccatgatgtacaatttccccacaaaggcagggcagtgtggaggtgtggtcacctcagtcggtaagattattggcatccatatcggtgggaatggacgccaaggcttctgtgctgggttgaagagaggttactttgccagtgagcaaggagagatccaatggatgaagtccaataaagaaactgggagactgaacattaatggtccaacacgtaccaaattggagcccagtgcattctacgacgtgtttgagggcagcaaagaaccagcagtcttaaccagtaaggatcctagacttgaggttgattttgagcaagctttgttttccaaatatgtaggaaataccctgcatgagcccgacgagtatgtgacacaggctgctctccactatgcaaaccagctaaagcaattagatataaacattaataagatgagtatggaagaagcatgctatggcactgaatatctagaggctatagacttgcacaccagtgccgggtacccctatagtgccctgggtgtcaagaaaagagacatacttgacccagtcactagagatactaccaaaatgaaattctacatggataaatatgggttagatttgccctattccacctatgtgaaagatgagcttagatccttagataagattaagaaagggaaatcccgcttgatcgaagccagtagtctaaatgactcagtctaccttaggatgactttcgggcatctctatgaaacttttcatgccaacccgggaactgtgactgggtctgcagtagggtgtaatcctgatgtgttctggagtaaattaccgatcctgctgccaggatcgctctttgcatttgactattcaggatatgatgcaagtctcagcccagtgtggtttagagctttggaggtggttctccgagagatcggctactcagaggaagctgtatcactaatagaaggaatcaaccacacccatcatgtgtatcggaacaggacatattgtgtccttggtggaatgccttcaggttgttccggtacttccatcttcaattccatgatcaataacataataatcagaacccttttgattaaaacttttaaagggatcgatttagatgagctgaatatggtagcttatggagatgatgtgttagctagctatccattccctattgactgctcggagctagccagaactggtaaagagtatggattaacaatgacacctgctgacaagtcaccttgctttaatgaagttacctgggaaaatgccacattcttaaagagaggcttcctgccagatcatcagttcccatttcttatccaccctaccatgcccatgagggagatccacgagtccattcgttggactaaagacgcacgaaacactcaggatcacgtgcgctctctgtgcctgttagcgtggcataatgggaaggaggaatatgaaaaatttgtgagcacaattagatcagttcccattggaagagccttggctataccaaattttgagaacttgagaagaaattggctcgagttatttt--a--atatacagttt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617110.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_B_CF310002_FRA_2012
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcactctgattttgcgggatctttgtgcgcct-g-ttttata-----atccc---t---tccc-t-----aagca-gtaacttagaagt------------tctacacaatcag-gaccaa-cagtcagcgtggcacgccagccacgttttgg-tcaagcacctctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-taatagcaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcatgcgccctcaaccca-ggggg-tggcatgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcct-cattggctgcttatggtgacaattgaa-------aggttgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----taccta----ttcatt-gggtttgtccctc-----ttaatct--------------taagaccatccaa-actcttgattacatattgctcctcaa--ttgtagaa-----gatggggtcacaagtttccactcagcgatccgggtcacatgagaactcgaactctgcgtcgg-agggttcgaccataaattacacaactataaactactataaggatgcatatgctgcaagtgcggggcgccaggatatgtcccaggacccgaagaaatttactgatcctgtcatggacgtcatacatgagatggctccaccactcaagtccccgagcgctgaggcatgcggttatagtgatcgtgtggctcagcttaccattgggaactccaccatcacgacacaggaagcggctaacatagtaatagcctatggagagtggcctgaatattgcccggacacagatgcgacggcagttgataaacccactcgacctgatgtgtcagtgaacagatttttcacactagatactaagtcttgggcaaaag------------------attcaaagggatggtactggaaattccctgacgttttgacagaagtgggtgtttttggtcagaacgcccagttccactacttataccgatctgggttttgcgtacacgtccagtgtaacgcaagtaagttccaccagggcgctctgctggtggctgtgttgcccgagtatgtgctcggcactatcgcaggagggactgggaatg------agaactctcaccctccctatgccaccacacagcctggtcaggttggtgcagttctgacacacccttatgtactagatgcggggatccctttgagccaactaactgtgtgcccacatcagtggattaacttaagaaccaataattgtgcaactattatagttccatatatgaacacggtcccctttgactcagctctcaaccactgtaactttggcctcctagttgttccagtagtaccgttggacttcaatgcaggtgccacttctgagattcccattacagtcaccatagcccccatgtgtgcggaattcgcgggtctgcgtcaggcagtgaaacaaggcataccaacagagctcaaacccggtaccaatcaatttctcactactgatgatggtgtttccgcaccaattttgccaggtttccacccaactccacccatacacataccaggggaagtgcataacctcttggaaatatgcagagtggagaccatcctggaagttaataa----------cctaaagaccaatgagaccaccccc------atgcagcgtttgtgctttccagtgtcggtgcagagta------aaacgggtgagttatgtgccgcctttagagcagacccaggaagagatggtccgtggcagtctacaatactaggtcagctctgtaggtattacacccagtggtcaggttcattggaagtgacattcatgtttgcgggctcattcatggctacaggtaagatgctcatcgcctacaccccacctggggggaatgtgcctgcggatagaatcacagcaatgttgggaacacatgtgatttgggacttcggattacagtcctctgtcacattagtcgtgccatggatcagtaacacacactacagggcacacgcccgtgctgggtactttgattattacaccaccggcattataaccatatggtaccaaactaactatgtggtgcccattggagcccccactacggcatatattgtggctttggcagcggcccaggataactttaccatgaaactatgtaaagacacagaggacatcgagcaaacagctaatatacaaggggaccct--------attgcagatatgattg---accaaactgt--------------------------gaacaatcaagtgaaccgctccttaactgcattgcaagtacta--------cctacagctgccaatacagaagcaagtagtcacagactaggcactggcgttgtaccagcactacaagctgcagagacaggggcgtcatcaaatgctagtgacaaaaacctcatagagactagatgcgtgttgaaccatcactccacacaggagacagccattgggaatttctttagtcgcgcaggtttggtcagcattattacaatgcccactacgggtacaca-aaacacagatggctacgttaactgggacatcgaccttatgggatatgctcaactgcggcggaagtgcgagctgttcacctacatgcgctttgacgctgagttcacattcgtcgtagccaagcccaatggtgagttagtcccccagttactgcaatacatgtacgtcccgcctggagctccgaaacccacttccagggactcattcgcttggcagaccgctaccaacccatctgtgtttgtgaaaatgacggacccaccagcccaagtgtcagtccccttcatgtcaccagccagtgcataccagtggttttatgacggttatcccaccttcggggagcatctccaagcaaacgatctagattatggtcaatgcccaaataacatgatgggcacttttagcattaggacagtggggacagagaaatcaccacactctattaccttgagggtatatatgaggattaaacacgtcagggcgtggatcccaaggcctctgagaaatcaaccctatttgtttaagaccaacccaaattataaaggaaa----tgacatcaagtgcaccagtgctagtagagacaaaat---aacaac---------------------------------------actggga------------------------------------------aagtttgggcagcaatcaggtgccatatatgtgggcaactatagggtagtgaatcggcaccttgccacacacacagactgggcaaaccttgtgtgggaggatagttctagggacctgctggtctcttccaccactgctcaagggtgcgacaccatcgctaggtgcaactgccaaaccggagtatactattgtagctccaaacggaaacactacccggttagtttcaccaagcccagtttgatattcgtggaggccagtgagtattatccagctagataccaatcccacctcatgctcgctgtgggccactcggagcctggtgactgtggcggcatcctcaggtgccaacacggtgtagtgggaattgtctccactggtgggaatggtctagtggggtttgctgatgttagagatcttctatggctggatgaggaagcgatggaacagggggtgtctgactacatcaag-ggcctaggtgatgcttttggtatgggtttcactgatgcagtatccagggaggtggaagccctgaaaaaccatttgattggctctgagggagcagtagaaaagatcctcaaaaatctagtgaaactcatctcagctctcgtcatcgtaatcaggagcgactatgacatggtcactctcaccgcaactctcgccctgattgggtgccacgggagtccgtgggcatggattaaagcaaaaacagcatccatccttgggatccccatggcacaaaagcagagtgcatcttggctcaagaaattcaatgacatggcgaatgcagcaaaggggttggagtgggtctccagtaaaatcagtaagtttattgattggctcaaggagaagatcatcccagctgcaagggaaaaagtcgagtttctcaacaacctcaaacaattacct-ttactagaaaaccaaatttccaatttagagcagtctgctgcctcacaagaggacctcgaagtcatgtttggcaatgtgtcatatttggccca---------cttttgtcgcaagttccagccactctacgcaactgaagcaaagagggtctatgccctagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtgtgtttaattatcagaggctcaccaggaacgggtaaatcactcgctacaggcatcatagcaagagccattgctgataagtaccactctagtgtgtactctttaccaccagacccagaccattttgatgggtacaagcagcaggtagtgacagttatggatgatttatgtcagaaccctgatggtaaagacatgtcattgttttgtcaaatggtgtccacagttgacttcattcccccaatggcctcactagaagagaagggggtgtcctttacgtccaaattcgtaattgcttcaaccaatgccagcaacattattgtccctacggtttcagactcagatgctatccgcaggaggtttttcatggattgtgatattgaagtgactgattcctataaaacagatcttgggcgcttggatgcgggcagggctgcgaagctttgttcggagaacaacactgccaacttcaaaaggtgcagcccgctggtgtgtggtaaagctatccagctgagggatagaaagtccaaagttaggtatagtgttgacactgtcgtgtcagaactgatcagagagtataataataggtctgccataggaaacaccatagaagctctgtttcaaggaccacctaagtttaggcccataagaatc---agtcttgaggagaagcctgctccagatgccattagtgatttgctcgctagcgttgacagtgaagaagtacggcaatattgt-agagaccaaggatggataattcctgaaacgccaactaatgtggagcggcaccttaatagggcagtattagtgatgcaatccatcgctactgtggtcgcagttgtatcccttctttatgttatctacaaactatttgccggtttccaaggcgcgtactctggagcgcctaagcaaaccctcaggaaacccgtgttgagaacagccactgttcaaggacctagcttagattttgccctgtctctcctgcgtcgaaacatcaggcaggtgcaaaccgaccaagggcatttcaccatgcttggggtgcgtgatcgccttgctatcctgcctcgtcattcacaaccggggaagaccatctgggttgagcacaaattggtcaatgtgcttgatgctgttgaactagtagatgaacaaggcgttaatctggagcttacactagtaactctagataccaatgaaaaatttagagacgtcaccaaattcatcccagagaacattagcggtgccagtgacgctacactagtgatcaacaccgaacatatgccgtcaatgttcatccctgtgggagacgttgtgcaatacgggtttctaaatcttagtggcaaaccaacccacaggaccatgatgtacaactttcctacaaaggctggacagtgcgggggtgtagtgacatccgtcggcaaagtcattggcatccacattggaggcaatgggcgacaagggttttgcgctggcctaaagaggagttactttgcaagtgaacaaggtgagatccaatgggtgaaacctaacaaggagactggcagattaaacatcaatggcccaacacacaccaagttggagcccagtgtgttccatgatgtgtttgagggcaataaggagccagcagtcctaacaagcaaggatcccagattagaggttgactttgagcaagccctgttctctaagtatgtaggtaatgttctccatgagcctgatgaatatgtgaaacaggcagccctccactacgcaaatcagctcaagcagctggatataaatactaataagatgagcatggaggaagcgtgctatggcacagagaacttggaagctattgacctccacactagcgcagggtacccttatagtgctttgggcataaagaagagagacatactagatcctaccaccagggacacaacaaaaatgaagttctacatggataagtatggtttggatttaccttactccacctacgtgaaagatgaactcagatctctggataagatcaagaaggggaagtctcgcttgatagaagctagcagcctaaatgactcggtgtatctcaggatgacttttggccacctgtatgagacattccacgctaatccagggactgtgacagggtcagcagttgggtgcaacccggacgtgttttggagcaaactcccaatcttactcccaggttcactgtttgcctttgactactcaggctatgatgccagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggatactcagaggaagcagtgtcactcatagaagggataaatcatacccaccatgtgtatcggaacaagacatattgtgtccttggcgggatgccgtcaggatgctctggcacctccattttcaactcgatgattaacaacatcatcatcaggactctcttaatcaaaacctttaaagggatagacctagatgagctgaatatggtggcttatggagatgatgtgttagctagttatcctttccccattgattgccttgagctagctaagactggcaaagaatatgggctgaccatgacacctgcggacaaatcaccttgcttcaatgaagtgacatgggagaacgccacctttttgaagagagggtttctaccagatcaccaattcccattcttgattcatcccacaatgccaatgaaagagatccacgagtccatacgttggaccaaagacgcgcgcaatacccaagaccatgtgcgttcactgtgcttattagcttggcacaatggcaaggatgaatatgaaaaatttgtgagcgcaattagatcagtcccaattggaaaagcattggcgattccgaattttgagaatttgagaagaaattggctcgaactatttt--a--atatacagtta-------------------------aaaa---------------ctggaccc-caccagga----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617105.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_C_CF350028_FRA_2011
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcactctggtattacggtacctttgtgcgcct-g-ttttatg-----cccct---tacccctt-a-----aattg-gtaacttagaagt------------tttacatacctgc-gaccaa-tagcgggcatgacgcaccagccatgtcttgg-tcaagcacttctg-ttcccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgttatccggctggctacttcgagaaacc-cagtaacaccatgaaagttgcagagtgtttcgctcagca--cta-ccccc---gtgtagatcaggtcgatgagtcactgcg-aaccccacgggcgaccgtggcagtggctgcgctggcggcctgcccat--------ggggtga-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagtcagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcctatcatggctgcttatggtgacaattgaa-------agattgttaccatatagctactggattggccacccgg--tgtctaacagagctattgtt-----tatcta----tttgtt-gggtacgtccttc-----ttgacta--------------taaggcccttcag-actcttaagtacatcttgtacctcaa--tcaaaaga-----gatgggagcacaagtctctactcagcggtccgggtcgcatgagaattcaaactctgcatcag-agggatcaaccataaattatacaaccataaattactacaaggatgcatatgctgcgagtgcaggccgccaggatatgtcccaagaccctaagaggttcaccgaccccgtcatggatgttatacacgagatggcaccaccactcaagtctccaagtgctgaagcatgtggttacagtgatcgcgtggcccagctcaccattgggaactctaccattacaacgcaggaagcagctaacatagttatagcctatggtgagtggcctgagtattgcccagatacagatgcaacggcagttgataagccaacaaggccagatgtgtcagtgaacaggtttttcacgctagataccaaatcttgggccaagg------------------actcaaaggggtggtattggaagttccctgatgttttgacagaggtaggcgtttttggacagaatgctcagtttcattacttgtatcgatcagggttttgtgtgcacgttcagtgtaacgcaagtaaatttcaccagggtgctttgctggtggctgtgctgcctgagtatgtactcggtaccatcgctggaggaactggcaacg------agaactcacacccaccctatgccactacacagcctggtcaggtcggcgcagtcttgacgcacccttacgtgctggatgcagggatccctttgagtcaattaaccgtatgcccacatcaatggatcaacttgagaaccaataattgtgcgactatcatagtgccgtacatgaacacggtcccctttgattcagcccttaatcattgtaactttggtctgctggtcgttccagtagtaccattggacttcaacgcaggtgccacatctgagattcccatcacagttactatagcccctatgtgcgcagagttcgcaggtctccgccaggcagtgaaacaaggtattcctacagagctcaagcctggcactaatcagttcctcactacagatgatggagtctctgcaccaattctgccaggcttccacccaacccctcccatacatataccaggagaagtacacaatttgctggaaatatgcagggtagaaacaatcctggaagttaataa----------tctaaagaccaacgagaccactcct------atgcagcgcttgtgtttcccggtgtcggtgcagagca------agacgggcgagttgtgtgccgcctttagagcggatcctggaagagatggtccgtggcagtccacaatattaggtcaactttgtaggtactacactcaatggtcaggttcactggaggtaacattcatgtttgcgggctctttcatggccacaggcaagatgctcattgcttacactccaccagggggaaatgtacccgcagataggatcacagcaatgctggggacgcatgttatttgggattttgggctacaatcttctgtgacattggttataccatggattagtaacacacattatagggcgcatgctcgcactgggtactttgactattacaccactggcatcataactatatggtaccagactaactacgtagtgcccattggtgcccccaccacggcatatattgtggccttggcggctgcccaggacaatttcaccatgaaattgtgtaaggatacagaagacattgaacaaacagctaatatacaaggggaccct--------attgcggacatgattg---accaaactgt--------------------------aaacaatcaggtaaatcgctccctaactgcactacaagtgttg--------cccacagctgccaacactgaggcaagcagccatagactgggcactggtgttgtaccagcactacaagctgcggagacaggggcttcatcaaacgctagtgacaaaaacctcattgagactagatgtgtgctaaaccaccactctacacaagagacagctatcggaaacttcttcagccgtgctggtttggttagtattatcacaatgcccaccacgggcacaca-gaacacagacggttacgttaattgggacatcgacctcatgggatacgctcaactgcggcggaaatgtgaattgttcacctatatgcgtttcgatgccgaatttacatttgttgtagccaaacctaacggcgagttagttccccaattattacagtatatgtacgtcccaccgggagccccgaagcccacttccagagactcgttcgcttggcagacagccaccaacccctctgtgtttgtaaaaatgacagacccaccagcccaagtgtctgttcctttcatgtcaccagccagcgcataccagtggttttatgatggttacccaacttttggtgaacacctccaagcaaatgacctggattacggtcagtgcccgaacaacatgatgggcacctttagcatcagaacagtggggactgagaagtcaccacattctattaccctgagagtgtatatgaggatcaagcatgttagggcatggataccaagacctctaagaaaccagccctatttatttaagaccaacccaaattataaagggaa----tgacattaaatgcaccagcaccagtagggacaagat---cacgac---------------------------------------gttgggg------------------------------------------aagttcggacagcagtcgggggctatctatgtaggtaactacagagtggtaaacaggcacctcgccacgcataatgattgggcgaaccttgtgtgggaggacagctctagagacttgttagtctcctctaccaccgcccaggggtgtgacactatcgctaggtgtgattgccagaccggagtgtattactgtaattctaaaagaaagcactacgcagttagcttcaccaagcctagtttaatttttgtggatgctagtgagtactatccggccaggtaccagtcccatcttatgcttgccccaggccactctgaacctggtgactgtggaggtattcttaggtgccagcacggtgttattgggatagtctccaccggagggaatggtctcgtgggttttgccgacgtgcgtgacctcctctggttggatgaagaggctatggagcagggggtctccgattacatcaaa-ggacttggcgatgcctttggtatgggcttcactgatgcagtatctagagaagtggaagctttgaaaaatcacctaattgggtcagagggtgcagtggaaaagatcctaaagaacctggtgaaactcatttcagctctagtcatagtcattagaagcgactatgacatggtcactctcacggcaaccctagcactaattggttgtcacgggagcccgtgggcctggattaaatcaaaaacggcttccatactaggtgtccctatggcacaaaaacagagtgcgtcttggctgaagaagttcaatgacatggcaagcgctgcaaaaggtctggaatggatttctaacaagatcagtaagttcattgactggctcaaagagaagattatcccagctgctaaggagaaagtggagtttctaagcaatcttaaacagctaccc-ttgttggaaaaccagatatccaacctagagcagtccgctgcttcacaagaagaccttgaggctatgtttggaaatgtgtcgtacttagctca---------cttctgtcgcaagtttcaaccactctacgccactgaggcaaaaagagtctacgctctggaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgattattaggggctcaccaggtacaggtaaatcgcttgccacaggcattattgctagagccattgctgacaaatatcattccagtgtgtactccctacccccagacccggatcacttcgatgggtacaaacaacaagtggtcacagtcatggatgacttgtgtcagaaccctgatggcaaggacatgtccttattctgtcagatggtgtcaactgtggattttattcccccaatggcgtcattggaagagaaaggagtgtctttcacttccaaatttgtcatcgcatctactaacgccagcaacatcattgtccctactgtctcagactcggacgcgattcgtaggagatttttcatggactgtgacatcgaagtgactgactcctacaagacagaccttggtcggctagatgcgggtagagccgctaaactttgttcagagaacaatactgccaattttaaaagatgtagtccactggtgtgcggtaaagccattcaacttagagacaggaagtcaaaagtaaggtatagtgttgataccgtggtgtcagagctaattagggagtacaacaataggtcagctgtaggcaacaccattgaggcactctttcaagggcccctgaaatttagaccaatcaggata---aatctagaggagaaaccagccccagatgccatcagcgacctgttagctagtgtggacagtgaagaagtacgccagtactgt-agagatcaagggtggatagtacctgagacaccaactaacgtcgagcgtcatctcaatagggctgctcttgttatgcaatccatagcgacagtggtggcggtggtctcactagtctatgtcatctataagctatttgctggattccaaggggcatactctggggctccgaaacaggcactgaagaagccagtcttgagaacagctactgtacagggccctagtttggacttcgctctgtcacttttacgtcgtaatattagacaagtgcagacagatcagggccatttcacaatgctcggtgttcgtgaccggttagccatcttgccgcggcacgcacaaccagggaaaataatatgggttgaacacaaactggtcaacgttctggacgctgtcgagctagtcgacgagcagggagtgaacttagaattaaccctagtgaccttagacaccaatgagaaatttagggacgttaccaaatttatcccagagacaatcagtggtgctagcgacgctactctagtgatcaacacagaacacatgccatcaatgtttgtaccggtgggtgatgtactacagtacggttttctgaaccttagtggcaagcccacccacagaaccatgatgtacaacttccccaccaaagcaggccagtgtggaggtgtcgtcacctctgttggcaaaatcatcggaattcacatcggagggaacggtcgtcagggtttctgcgctggtttgaagagaagttactttgctagtgagcaaggggaaattcagtggatgaagcccaataaggaaactgggcgcttgaatatcaatggaccgacccgaaccaaactagaacccagtgtgttccacgatgtgttcgagggaaacaaggaacctgcagttctaaccagcaaagaccctagactggaagttgattttgaacaggccctattctctaaatatgttggtaacacactgcatgagcctgatgagtatgtgactcaagctgctcttcactatgcaaaccaactaaaacaattgaacattgacaccggtaaaatgagcatggaggaagcatgttatggaacagacaacctagaagccatagatctgcacactagtgctggatacccctatagtgccttgggtatcaagaagagagacattctcgatccagtctccagggatgtcactagaatgaagttttacatggacaagtatggcttggatctcccctattccacttatgtgaaagatgaacttaggtccctggacaaagtcaagaaaggaaaatcccgtttaattgaagctagcagtttgaacgactctgtctatctcagaatgacctttggacacctgtatgaagtatttcatgctaacccagggaccataactggatcggcagtggggtgtaatcctgatgtgttttggagcaagttaccaattctgctgccaggtgcgctgttcgcatttgattactcagggtacgacgcaagtctcagtccagtgtggtttagagctttggaggtggtcctccgcgagattggatattcagaagaagctatatcactcatagaggggatcaaccacactcaccatgtgtaccggaacaaaacgtattgtgtccttggtggaatgccatcaggttgctctggtacctctatcttcaactctatgattaataatatcataatcagaactctcttgattaaaacctttaagggaatagacttagatgagctgaacatggtggcctatggagatgatgtactggctagttatccttttcctattgattgcttagagttagctaagactggtaaagagtatggattgacaatgacacctgccgacaaatcgccttgcttcaatgaagtcacctgggaaaatgccaccttcttgaagaggggctttctaccagaccatcaattcccatttctaatccaccccacaatgcccatgagagaaatccatgaatccattcgatggactaaggatgcccgcaacacacaagatcacgtgcgctccttgtgcctgctggcttggcataatgggaaggaagagtatgaaaaatttgtgagcacaattagatcagtcccgattggaaaggcgctagctattcccaattttgagaatctgagaagaaattggcttgaattattct--a--atttacagttt-------------------------aaaa---------------ctggaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617107.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_C_CF178025_FRA_2012
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccat-t-gggcgctagcacactggctttgcggagcctttgtgcgcct-g-ttttatg-----cccct---tacccctt-g-----aattg-gtaacttagaagt------------tttgcatacctgc-gaccaa-tagcgggcatgacgcaccagtcatgtcttgg-tcaagcacttctg-ttcccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgttatccggctggctacttcgagaaacc-cagtaacaccatgaaagttgcagagtgtttcgctcagca--cta-ccccc---gtgtagatcaggtcgatgagtcactgcg-aaccccacgggcgaccgtggcagtggctgcgctggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagtcagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatcatggctgcttatggtgacaattgaa-------ggattgttgccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----tatcta----tttgtt-gggtacgtccttc-----ttgacta--------------caagacccttcag-actcttaagtacatcttgtaccttaa--tcaaaaga-----gatgggagcacaagtctctactcagcggtccgggtcacatgagaattcaaactctgcatcag-aggggtcaaccataaattatacaaccataaattactacaaggatgcatatgctgcgagtgcaggccgccaggatatgtcccaagaccctaagaagttcaccgaccccgtcatggatgttatacacgagatggcgccaccactcaagtctccaagtgctgaagcatgtggttacagtgatcgcgtagcccagctcaccattggaaactccaccattacaacgcaggaagcagctaacatagttatagcctatggtgaatggcctgagtattgcccagacacagatgcaacggcagttgacaagccaacaaggccagatgtgtcagtgaacaggtttttcacgctagataccaaatcttgggccaagg------------------actcaaaggggtggtattggaagttccctgatgttttgacagaggtaggcgtttttggacagaatgctcagtttcattacttgtatcgatcagggttttgtgtgcacgttcagtgtaacgcaagtaaatttcaccagggtgctttgctggtggctgtgctgcctgagtatgtactcggcaccatcgctggaggaactggcaacg------agaattcacacccaccctatgccactacacagcctggacaggtcggcgcagtcttgacgcacccttacgtgctggatgcagggatccctttgagtcaattaaccgtgtgcccacaccaatggatcaacttgagaaccaataattgtgcgactatcatagtgccgtacatgaacacggtcccttttgactcagcccttaatcattgtaactttggtctgctggtcgttccagtagtgccattggacttcaacgcaggtgctacatctgagattcccatcacagttactatagcccctatgtgcgcagagttcgcaggtctccgccaggcagtgaaacaaggtattcctacagagctcaagcctggcactaatcagtttctcactacagatgatggagtctctgcaccaattctgccaggcttccacccaacccctcccatacatataccaggggaagtacacaatttgctggaaatatgcagggtagaaacaatcctggaagttaataa----------tctaaagaccaacgagaccactcct------atgcagcgcttgtgtttcccggtgtcggtacagagca------agacgggcgagttgtgtgccgcttttagagcagatcctggaagagatggcccgtggcagtccacaatattaggtcaactctgtaggtactacactcaatggtcaggttcactagaggtaacatttatgtttgcgggctctttcatggccacaggcaagatgctcattgcttatactccaccaggggggaatgtacctgcagataggatcacagcaatgctggggacgcatgtaatttgggattttgggctacaatcttctgtgacattggttataccatggattagtaacacacattatagagcgcatgctcgcactgggtactttgactattacaccactggtattataactatatggtaccagactaactacgtagtgcccattggtgcccccaccacggcatatattgtggccttggcggctgcccaggacaatttcaccatgaaattgtgcaaggatacagaagacattgaacaaacagctaatatacaaggggaccct--------attgcggatatgattg---accaaactgt--------------------------aagtaatcaggtaaatcgctccctaactgcactacaagtgttg--------cccacagctgccaacactgaggcaagtagccatagactgggcactggtgttgtaccagcactgcaagctgcggagacaggggcttcatcgaatgctagcgacaaaaacctcattgagactagatgcgtgctgaaccaccactctacacaagagacagctatcggaaacttcttcagccgtgctggtttggttagtattatcacaatgcccaccacgggcacaca-aaacacagacggttacgttaattgggacatcgacctcatgggatatgctcaactgcggcggaaatgtgaattgttcacctatatgcgtttcgacgccgaatttacgtttgttgtagccaaacctaacggcgagttagttccccaattattacagtacatgtacgtcccaccgggagccccgaagcccacctccagagactcgttcgcttggcagacagccaccaacccctctgtgtttgtgaaaatgacagacccaccagcccaagtgtctgttcctttcatgtcaccagccagcgcataccagtggttctatgatggttacccaacttttggtgaacacctccaagcaaatgacctggattacggtcagtgcccgaacaacatgatgggtacctttagcatcagaacagtggggactgagaagtcaccacattccattaccctgagagtgtatatgaggatcaaacatgttagggcatggataccaaggcccctaagaaaccagccctatttatttaagaccaacccaaattataaagggaa----tgacattaaatgcaccagcaccagtagggacaagat---cacgac---------------------------------------gttgggg------------------------------------------aagttcggacagcagtcgggagctatttatgtaggtaactacagagtggtgaacaggcacctcgccacgcataatgattgggcgaaccttgtgtgggaggacagctctagagacttgttagtctcctccaccaccgcccaggggtgtgacactatcgctaggtgtgattgccagaccggagtatattactgtaattctaaaagaaagcactacgcagttagcttcaccaagcctagtttaatctttgtggatgctagtgagtactatccggccaggtaccagtcccatcttatgcttgccccaggccactctgaacctggtgactgtggaggtattcttaggtgccagcacggtgttattgggatagtctccaccggagggaatggtctcgtgggttttgccgacgtgcgtgacctcctctggttggacgaagaggctatggagcagggggtctccgattacatcaaa-ggacttggcgatgcctttggtatgggcttcactgatgcagtatctagagaagtggaagctttgaaaaatcacctaattgggtcagagggtgcagtggaaaagatcctaaagaacctggtgaaactcatttcagctctagtcatagtcattagaagcgactatgacatggtcactctcacagcaaccctagcactaattggttgtcacgggagcccgtgggcctggatcaaatcaaaaacggcttccatactaggtatccctatggcacaaaaacagagtgcgtcttggctgaagaagttcaatgacatggcaagtgctgcaaaaggtctggaatggatttctaacaagatcagtaagttcattgattggctcaaagagaagattgtcccagctgctaaggagaaagtggagtttctaagcaatcttaaacaactaccc-ttgctggaaaaccagatatccaacctagagcagtctgctgcttcacaagaagatcttgaggctatgtttggaaatgtgtcgtacttagctca---------cttctgtcgcaagtttcaaccactctacgccactgaagcaaaaagagtctacgctctggaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattaggggctcaccaggtacaggtaaatcgcttgccacaggcattattgctagagccattgctgacaaatatcattccagtgtgtactccctacccccagacccggatcacttcgatgggtacaaacaacaagtggtcacagtcatggatgacttgtgtcagaaccctgatggcaaggacatgtccttattctgtcagatggtgtcaactgtggattttattcccccaatggcgtcattggaagagaaaggagtgtctttcacttccaaatttgtcgtcgcatctactaacgccagcaacatcattgtccctactgtctcagactcggacgcgattcgtagaagatttttcatggactgtgacatcgaagtgactgactcctacaagacagaccttggtcggctagatgcaggtagagccgctaaactttgttcagagaataatactgccaattttaaaagatgtagtccactggtgtgcggtaaagccattcaactgagagacaggaagtcaaaagtaaggtatagtgttgataccgtggtgtcagagctaattagggagtacaacaataggtcagctgtaggcaacaccattgaggcactctttcaagggcccctgaaatttagaccaatcaggata---agtctagaggagaaaccagccccagatgccatcagtgacctgttggctagtgtggacagtgaagaagtacgccagtactgc-agagatcaagggtggatagtacctgagacaccaactaacgtcgagcgtcatcttaatagggctgttcttgttatgcaatccatagcgacagtggtggcggtggtctcactagtctatgtcatctataagctatttgctggattccaaggggcatactctggggctccgaaacaggcactgaagaagccagtcttgagaacagctactgtgcagggccctagtttggacttcgctctgtcacttttacgtcgtaacattagacaagtgcaaacagatcagggccatttcacaatgctcggtgttcgtgaccggctagccatcttgccgcggcacgcacaaccagggaaaacaatatgggtcgaacacaaattggtcaacattctggacgctgtcgagctagtcgacgagcagggagtgaacttagaattaaccctagtgaccttagacaccaatgagaaatttagggacgttaccaaatttatcccagaggcaatcagtggtgctagcgacgctactctagtgatcaacacagaacacatgccatcaatgtttgtgccggtgggtgatgtcgtacagtacggttttctgaaccttagtggcaagcccacccacagaaccatgatgtacaacttccccaccaaagcaggccagtgtggaggtgtcgtcacctctgttggcaaaatcatcgggattcacatcggagggaacggtcgccagggtttctgcgctggtttgaaaagaagttactttgctagtgagcaaggggaaattcagtggatgaagcccaataaggaaactgggcgcttgaacatcaatggaccgactcgaaccaaactagaacccagtgtgttccacgatgtgttcgagggaaacaaggagcctgcagttctaaccagcaaagaccctagactggaagttgattttgaacaggccctattctctaaatatgttggtaacacactgcatgagcctgatgagtatgtgactcaagctgctcttcactatgcaaaccaactaaaacagttgaacattgacaccggtaaaatgagcatggaggaagcatgttatggaacagacaacttagaagccatagatctgcacactagtgctggatacccttatagtgccttgggtatcaagaagagagatattctcgatccagtctccagggatgtcaccagaatgaagttttacatggacaagtatggcttagatctcccctattccacttatgtgaaagatgagcttaggtctctggacaaaatcaagaaaggaaaatcccgtttaattgaagctagcagtttgaacgactctgtctatctcagaatgaccttcggacacctgtatgaagtatttcatgctaacccagggaccataactggatcggcagtggggtgtaatcctgatgtgttttggagcaagttaccaattctgctgccaggtgcgctgttcgcatttgattactcagggtacgacgcaagtctcagtccagtgtggtttagagccttggaggtggttctccgcgagattggatattcagaagaagctatatcactcatagaggggatcaaccacactcaccatgtgtaccggaacaaaacgtactgtgtccttggtggaatgccatcgggttgctctggtacctctatcttcaactctatgatcaataatatcataatcagaactctcttgattaaaacctttaagggaatagacttagatgagctgaacatggtggcctatggagatgatgtactggctagttacccttttcctattgattgcttagagctagctaagactggtaaagagtatggattgacaatgacacctgccgacaaatcgccttgcttcaatgaaatcacctgggaaaatgccaccttcttgaaaaggggctttctaccagaccatcaattcccatttttaatccaccccacaatgcccatgagagaaatccatgaatccatccggtggactaaggatgcccgcaacacacaagatcacgtgcgctccttgtgcctgctggcttggcataatgggaaggaagagtatgaaaaatttgtgagcacaattagatcagtcccgattggaaaggcgctagctattcccaattttgagaatctgagaagaaattggcttgaattattct--a--atttacagttt-------------------------aaaa---------------ctggaccc-caccagaa----atctggt------c-g-----tgtcaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617106.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_C_CF172083_FRA_2012
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactggcttcacggagcctttgtgcgcct-g-ttttacg-----cccct---tacccctt-a-----aattg-gtaacttagaagt------------tttgcatacctgc-gaccaa-cagcgggcatgacgcaccagtcatgtcttgg-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctggctacttcgagaaacc-cagtaacaccatgaaagttgcagagtgtttcgctcagca--cta-ccccc---gtgtagatcaggtcgatgagccactgcg-aaccccacgggcgaccgtggtagtggctgcgttggcggcctgcccat--------ggggtga-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctggtcagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatcatggctgcttatggtgacaattgaa-------ggattgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtc-----tatcta----tttgtt-gggtacgtccttc-----ttgacta--------------taaggtccttcag-actcttaagtacatcttgtaccttaa--tcaacaga-----gatgggagcacaagtctctactcagcggtccgggtcgcatgagaattcaaactctgcatcag-agggatcaactataaattatacaaccataaattactacaaggatgcatatgctgcgagtgcaggccgccaggatatgtcccaagaccctaaaaaattcaccgaccccgtcatggatgttatacacgagatggcaccaccactcaaatctccaagtgctgaagcatgtggttacagtgatcgcgtggctcagctcaccattggaaactctaccattacaacgcaggaagcagctaacatagttatagcctatggtgagtggcctgagtattgcccagatacagatgcgacggcagttgacaagccaacaagaccagatgtgtcagtgaacaggtttttcacgctagataccaagtcttgggccaagg------------------actcaaaagggtggtattggaagttccctgatgttttgacagaggtaggcgtttttggacagaatgctcagtttcattacttgtatcgatcagggttttgtgtgcacgttcagtgtaacgcaagtaaattccaccagggtgctttgctggtggctgtgctgcctgagtacgtactcggcaccatcgctggaggaactggcaacg------agaattcacatccaccctatgccaccacacagcctggtcaggtcggcgcagtcttgacgcacccttacgtgctggatgcagggatccctttgagtcaattaaccgtgtgcccacatcaatggatcaacttgagaaccaataattgtgcgactatcatagtaccgtacatgaacacggtcccttttgattcagcccttaatcattgcaactttggcctgctggtcgtcccagtagtgccattggactttaacgcgggtgccacatctgagattcccatcacagttactatagcccctatgtgcgcagagttcgcaggtctccgccaggcagtgaaacaaggcattcccacagagctcaagcctggcactaatcagtttctcactacagatgatggagtctctgcaccaattctgccaggcttccacccaacccctcccatacatataccaggagaagtacacaatttactggaaatatgcagggtagaaacaatcctggaagttaataa----------tctaaagaccaacgagaccactcct------atgcagcgcttgtgtttcccggtgtcggtgcagagca------agacaggcgagttgtgtgccgcttttagagcagatcctggaagagatggcccgtggcagtccacaatattaggtcaactctgtaggtactacactcaatggtcaggttcactggaggtaacgttcatgtttgcgggctctttcatggccacaggcaagatgctcattgcttacactccaccagggggaaacgtacccgcagataggatcacagcaatgctggggacgcatgtaatttgggattttgggctacaatcttctgtgacattggttataccatggatcagtaacacacattatagggcgcatgctcgcactgggtactttgactattacaccactggcatcataactatatggtaccagactaactacgtagtgcccattggtgcccccaccacggcatatattgtggccttggcggctgcccaggacaatttcactatgaaattgtgcaaggatacagaagacattgaacaaacagctaacatacaaggggacccc--------attgcggacatgattg---accaaactgt--------------------------aagtaatcaggtaaatcgctccctaactgcattacaagtgttg--------cccacagctgccaatactgaggcaagtagccatagactgggcactggtgttgtaccagcactgcaagctgcggagacaggggcctcatcaaacgctagtgataaaaacctcattgagactaggtgtgtgctaaaccaccactctacacaagaaacagctattggaaacttcttcagccgtgctggtttggttagcattatcacaatgcccaccacgggcacaca-gaacacagacggttacgttaattgggacatcgacctcatgggatatgctcaactgcggcggaaatgtgaattgttcacctatatgcgtttcgatgccgaatttacatttgttgtagccaaacctaacggcgagttagttccccaattattacagtacatgtacgtcccaccgggagccccaaaacccacctccagagactcgttcgcttggcagacagccaccaacccctctgtgtttgtaaaaatgacagacccaccagcccaagtgtctgttcctttcatgtcaccagccagcgcataccagtggttttatgatggttacccaactttcggtgaacacctccaagcaaatgacctggattacggtcagtgcccgaacaacatgatgggcacctttagtatcagaacagtcggaactgagaagtcaccacattccattaccctgagagtgtatatgaggatcaagcatgttagggcatggataccaagacctctaagaaatcagccctatttatttaagaccaacccaaattataaagggaa----tgacattaaatgcaccagcaccagtagggacaagat---cacgac---------------------------------------gttgggg------------------------------------------aagttcggacagcagtcaggggctatctatgtaggtaactacagagtggtaaacaggcaccttgccacgcataatgattgggcgaacctcgtgtgggaggacagctctagagacttgttagtctcctccaccaccgcccaggggtgtgacactatcgctaggtgtaattgccagaccggagtgtattactgtaattctaaaagaaaacactacgcagttagcttcaccaagcctagtttaatttttgtggatgctagtgagtactatccggccagataccagtcccatcttatgcttgccccaggccactctgaacctggtgactgtggaggtattcttaggtgccagcacggtgttatcgggatagtctccaccggagggaatggtctcgtgggctttgccgacgtgcgtgacctcctctggttggacgaagaggccatggagcagggggtctccgattacatcaaa-ggacttggcgacgcctttggtatgggcttcactgatgcagtatctagagaagtggaagctttgaaaaatcacctaattgggtcagagggtgcagtggaaaagatcctaaagaatctggtgaaactcatttcagctctagtcatagtcattagaagcgactatgatatggtcactctcacggcaaccctagcactgattggttgtcacgggagcccgtgggcctggattaaatcaaagacggcctccatactaggtatccctatggcacaaaaacagagtgcgtcttggctgaagaagttcaatgacatggcaagcgccgcaaaaggtctggaatggatttctaacaagatcagtaagttcattgactggctcaaggagaagattgtcccagctgctaaagagaaagtggagtttctaagcaatcttaaacaactgcct-ttgttggaaaaccagatatccaacctagagcagtctgctgcttcacaagaagatcttgaggccatgtttggaaacgtgtcgtacttagctca---------cttctgtcgcaagtttcaaccactctacgccaccgaggcaaaaagagtctacgctctggaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattaggggctcaccaggtacaggtaaatcgcttgccacaggcattattgctagagccattgctgacaaatatcattccagtgtgtactccttacccccagacccggatcacttcgatgggtacaaacaacaagtggtcacagtcatggatgatttgtgtcagaaccctgatggcaaggacatgtccttattctgtcagatggtgtcaactgtggactttattcccccaatggcgtcattggaagagaaaggagtgtctttcacttccaaatttgtcatcgcatctactaacgccagcaacatcattgtccctactgtctcagactcggacgcgattcgtaggagattcttcatggactgtgacattgaagtgactgactcctacaagacagaccttggccgactagatgcgggtagagccgctaaactttgttcagaaaacaacactgccaattttaaaagatgtagtccactggtgtgcggtaaagccattcaactgagagacaggaaatcaaaagtaaggtacagtgttgataccgtggtgtcagagctaattagggagtacaacaataggtcagctgtaggcaacaccattgaggcactctttcaagggcccctgaaatttagaccaatcaggata---agtttagaggagaaaccagccccagatgccatcagcgacctgttagctagtgtggacagtgaagaagtgcgccagtactgt-agagatcaagggtggatagtacctgagacaccaactaacgttgagcgtcatcttaatagggctgttcttgttgtgcaatccatagcgacagtggtggcggtggtctcactagtctatgtcatctataagctatttgctggattccaaggggcatactctggggctccgaaacagacactgaagaagccagtcttgagaacagctactgtacagggccctagtttggacttcgccctgtcacttttacgtcgtaacatcagacaagtgcagacagatcagggccatttcacgatgctcggtgttcgtgaccggttagccatcttgccgcggcatgcacaaccagggaaaacaatatggtttgaacacaaactggtcaacattctggacgctgtagagctagtcgacgagcagggagtgaacttagaattaaccctagtgaccctagacaccaatgagaaatttagagatgttaccaaatttatcccagagacaatcagtggtgctagcgacgctactctagtgatcaacacagagcacatgccatcaatgtttgtaccggtgggtgatgtcgtacagtacggttttttgaaccttagtggcaagcccacccacagaaccatgatgtacaacttccccaccaaagcaggccagtgtgggggtgtcgtcacctctgttggcaaaatcatcgggattcacatcggagggaacggtcgtcagggtttctgcgctggtttgaagagaagttactttgctagtgagcaaggggaaattcagtggatgaagcccaataaggaaactgggcgcttgaacatcaatggaccgactcgaaccaaactagaacccagtgtgttccacgatgtgttcgagggaaacaaggaacctgcagttctaaccagcaaagaccctagactggaggttgattttgaacaggccctattttctaaatatgttggtaacacactgcatgaacctgatgagtatgtgactcaagccgctcttcactacgcaaaccaactaaaacagttgaacattgacaccggtaaaatgagcatggaggaagcatgttatggaacagataacctagaagccatcgatctgcacactagtgctggatacccctatagtgccttgggtatcaagaagagggacattctcgatccggtctccagggacgtcaccagaatgaagttttacatggacaagtatggcttggatctgccctattccacttatgtgaaagatgagcttaggtctctggacaagatcaagaaaggaaaatcccgtttaattgaagctagcagtttgaacgactctgtctatctcagaatgaccttcggacacctgtatgaagtatttcatgctaacccagggaccataactggatcagcagtggggtgtaatcctgatgtgttttggagcaagttaccaattctgctgccaggtgcgctgttcgcatttgattactcagggtacgacgcaagtctcagtccagtgtggtttagagccttggaagtggttctccgcgagattggatattcagaagatgctatatcactcatagaggggatcaaccacactcaccatgtgtaccggaacaaaacgtactgtgtccttggtggaatgccatcaggttgctctggtacctctatcttcaactctatgattaataatatcataatcagaactctcttgatcaaaacctttaaaggaatagatttagatgagctgaacatggtggcctatggagatgatgtactggctagttacccttttcctattgattgcttagagctggctaagactggtaaagagtatggattgacaatcacacgtgctgaccaatcgccttggttcaatgaagtcacttgggaaaatgccaccttcttgaaaaggggctttctaccagaccaccaattcccatttttaatccaccccacaatgcctatgagagaaatccatgaatccattcggtggactaaggacgcccgcaacacgcaagatcacgtgcgctccttgtgcctgctggcttggcataatgggaaggaagagtatgaaaaatttgtgagcacaattagatcagtcccgattggaaaggcgctagctattcccaattttgagaatctgagaaggaattggcttgaattattct--a--atttacagttt-------------------------aaaa---------------ctggaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617115.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_C_PAR190033_FRA_2014
------------------ttaaaa--cag-cct-gtgggttg-t-ccccacccaca-gggcccac-t-gggcgctagcacactggctttacggagcctttgtgcgcct-g-ttttatg-----cccct---tacccctt-a-----aattt-gtaacttagaagt------------cctgcatacctac-gaccaa-tagcgggcatgacgcaccagtcgtgtcttgg-tcaagcacttctg-ttcccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgttatccggctggctacttcgagaaacc-cagtaacaccatgaaagttgcagagtgtttcgctcagca--cta-ccccc---gtgtagatcaggtcgatgagtcactgcg-aaccccacgggcgaccgtggcagtggctgcgttggcggcctgcccat--------ggggaga-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagtcagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttatcatggctgcttatggtgacaattaaa-------ggattgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----tatcta----tttgtt-gggtacatccttc-----ttgacta--------------taaggcccttcag-actcttaagtacatcttgtaccttaa--tcaaaaga-----gatgggagcacaggtctctactcagcggtccgggtcgcatgagaattcgaactctgcatcag-agggatcaactataaattatacaaccataaattactacaaggatgcatatgctgcgagtgcaggccgccaggatatgtcccaagaccctaagaagttcaccgaccccgtcatggatgttatacacgagatggcaccaccactcaagtctccaagtgctgaagcatgtggttacagtgatcgcgtggcccaactcaccattggaaactctaccattacaacgcaggaagcagctaacatagttatagcctatggtgaatggcctgagtactgcccagatacagatgcaacggcagttgacaagccaacaagaccagatgtgtcggtgaacaggtttttcacgctagataccaaatcttgggccaagg------------------actcaaaggggtggtattggaagttccctgatgttttgacagaggtaggcgtttttggacagaatgctcagtttcattacttgtatcgatcagggttttgtgtgcacgttcagtgtaacgcaagtaaatttcaccagggtgctttgctggtggctgtgctgcctgagtatgtactcggcaccattgctggaggaactggtaacg------aaaattcacacccaccctatgccactacacagccaggccaggtcggcgcagtcttgacgcacccttacgtgctggatgcagggatccctttgagtcaattaaccgtgtgcccacaccaatggatcaacttgagaaccaataattgtgcgactattatagtaccgtacatgaacacggtcccttttgattcagcccttaaccattgtaactttggcctgctggtcgttccagtagtgccattggatttcaatacaggtgccacatctgagattcccatcacagttactatagcccctatgtgcgcagagttcgcaggtctccgccaggcagtgaaacaaggtattcctacagagctcaagcctggcactaatcagtttctcaccacagatgatggagtttctgcaccaattctgccaggcttccaccccacccctcccatacatataccaggagaagtacgcaatttgctggaaatatgcagggtagaaacaatcttggaagtcaacaa----------tctaaagaccaacgagaccactcct------atgcagcgcttgtgtttcccggtgtcggtgcagagca------agacgggcgagttgtgtgccgcttttagagcagatcctggaagagatggtccgtggcagtccactatattaggccaactctgtaggtattacactcaatggtcaggttcactggaggtaacattcatgtttgcgggctcttttatggccacaggcaagatgctcattgcttacactccaccagggggaaatgtacccgcagataggatcacagcaatgctggggacgcatgtaatttgggattttgggctacaatcttctgtgacattggttataccatggattagcaacacacattatagagcgcatgcccgcactgggtattttgactattacaccactggcatcataactatatggtaccagactaactatgtagtgcccattggtgcccccaccacggcatatattgtggccttggcggctgcccaggataatttcaccatgaaattgtgcaaggatacagaagacattgagcaaacagctaatatacaaggggacccc--------attgcggatatgattg---accaaactgt--------------------------aagcaatcaggtaaatcgctccctaactgcactacaagtgttg--------cccacagctgccaacactgaggcaagtagccatagactgggcactggcgttgtaccagcgctgcaagctgctgagacaggggcttcatcaaatgctagtgacaaaaacctcattgagactaggtgtgtgctaaaccaccactctacacaagagacagctatcggaaacttcttcagccgtgctggtttggttagcattatcacaatgcccaccacgggcacaca-gaacacagacggttacgttaattgggacatcgacctcatgggatatgctcaactgcggcggaaatgtgaattgttcacctacatgcgtttcgatgccgaatttacatttgttgtagccaagcccaacggtgagttagttccccaattattacagtacatgtacgtcccaccgggagccccgaaacccacctccagagactcgttcgcttggcagacagccaccaacccctctgtgtttgtgaaaatgacagacccaccagcccaagtgtctgttcctttcatgtcaccagccagcgcataccagtggttttatgatggttatccaacttttggtgaacaccttcaagcaaatgacctggattacggtcagtgcccgaacaacatgatgggcacctttagcattagaacagtaggaactgagaagtcaccacattccattaccttgagagtgtatatgaggatcaagcatgttagggcatggataccaagacctctaagaaatcagccctacttgtataagaccaacccaaattataaagggaa----tgacattaaatgcaccagcaccagtagggacaagat---cacgac---------------------------------------gttgggg------------------------------------------aagttcggacagcagtcaggggctatctatgtaggtaactacagagtggtaaacaggcacctcgccacgcataatgattgggcgaatctcgtgtgggaggacagctctagagacttgttagtctcctccaccaccgcccagggatgcgacactatcgctaggtgtgattgccagaccggagtgtattactgtaattctaaaagaaagcactacgcagttagcttcaccaagcctagtttaatatttgtggacgctagtgagtactacccggccagataccagtcccatcttatgcttgccccaggccattctgaacctggtgactgtggaggtattcttaggtgccagcacggtgttattgggatagtctccaccggagggaatggtctcgtgggttttgctgacgtgcgtgacctcctctggttggacgaagaggctatggagcagggggtctccgattacatcaaa-ggacttggcgatgcctttggtatgggcttcactgatgcagtatctagagaagtggaagctttgaaaaatcacctaattgggtcagagggtgcagtggaaaagatcctaaagaacctggtgaaactcatttcagctctagtcatagtcattagaagcgactatgacatggtcacactcacggcaaccctagcactaattggttgtcacgggagcccgtgggcctggattaaatcaaaaacggcttccatactaggtatccctatggcacaaaaacagagtgcgtcttggttgaagaagttcaatgacatggcaagcgctgccaaaggtctggaatggatttctaacaagatcagcaagttcattgactggctcaaagagaagattgtcccagctgctaaggagaaagtggagtttctaagcaatcttaaacaactaccc-ttgttggaaaaccagatatccaacctagagcagtctgctgcttcacaagaagaccttgaggctatgtttggaaatgtgtcgtacttggctca---------cttctgtcgcaagtttcaaccactctacgccactgaagcaaaaagagtctacgttctggaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattaggggctcaccgggtacaggtaaatcgcttgccacgggcattattgctagagccattgctgacaaatatcattccagtgtgtactccctacccccagacccggatcacttcgatgggtacaaacaacaagtggtcacagttatggatgacttgtgtcagaaccctgatggcaaggacatgtctttattctgtcagatggtgtcaactgtggattttattcccccaatggcgtcattggaagagaaaggagtgtctttcacttccaaatttgttatcgcatctactaacgccagcaacatcattgtccctactgtctcagactcggacgcgattcgtagaagatttttcatggactgtgacatcgaagtgactgactcctacaagacagaccttggtcggttagatgcgggtagagccgctaaactctgttcagagaacaacacagcccattttaaaagatgcagtccactggtgtgcggtaaagccattcaactgagagacaggaagtcaaaagtaaggtatagtgttgataccgtggtgtcagagctaattagggagtacaacaataggtcagctgtaggtaacaccattgaggcactctttcaaggacccctgaaatttagaccaatcaggata---agtctagaggagaaaccagccccagatgccatcagcgacctgttagctagtgtggacagtgaagaagtgcgccagtactgt-agagatcaagggtggatagtgcctgagacaccaactaacgtcgagcgtcatctcaatagggctgtccttgttatgcaatccatagcgacagtggtggcagtggtctcactagtctatgtcatctataagctatttgctggattccaaggggcttactctggagctccgaagcaggtactgaagaagccaatcttgagaacagctactgtacagggccctagtttggacttcgctctgtcacttttacgtcgtaacattagacaagtgcagacagatcagggtcattttacaatgctcggtgttcgtgaccggttagccatcttgccgcggcacgcacaaccagggaaaacaatatgggttgaacacaaactggtcaacattctggacgctgtcgagctagtcgacgagcagggagtgaacttagaattaaccctagtgaccttagacaccaatgagaaatttagggacgttaccaaatttatcccggaggcaatcagtggtgctagcgacgctactctagtgatcaacacagaacacatgccatcaatgtttgtgccggtgggtgatgtcgtacagtacggttttctcaaccttagtggtaagcccacccacaggaccatgatgtacaacttccccaccaaagcaggtcagtgtggaggtgtcgtcacctctgttggcaaaatcatcgggattcacatcggagggaacggtcgtcagggtttctgcgccggtttgaagagaagttactttgctagtgagcaaggggaaattcaatggatgaagcccaataaagaaactgggcgcttgaacatcaatggaccgacccgaaccaaattagaacccagtgtgttccacgatgtgttcgagggaaacaaggaacctgcagttctaaccagcaaagaccctagactggaagttgattttgaacaggccctattctctaaatatgttggtaacacactgcatgagcctgatgaatatgtgactcaagctgctcttcactatgcaaaccaactaaaacagttgaacattgacaccggcaaaatgagcatggaggaagcatgttatggaacagacaacctggaagccatagatctgcacactagtgctggatacccctatagtgccttgggtatcaagaagagagacattctcgatccagtttccagggatgtcaccagaatgaagttttacatggacaagtatggtttggatctcccttattccacttatgtgaaagatgagcttaggtctctagacaaaatcaagaaaggaaaatcccgtttaattgaagctagcagcttgaacgactctgtctatcttagaatgaccttcggacacctgtacgaggtatttcatgctaacccagggaccataactggatcagcagtggggtgtaatcctgatgtgttttggagcaagttaccaattctgctgccaggtgcgctgttcgcatttgattactcagggtacgacgcaagtctcagtccagtgtggtttagagccttggaggtggttctccgcgaggttggatattcagaagaggctatatcactcatagaggggatcaaccacactcaccatgtataccggaacaaaacgtactgtgtccttggtggaatgccatcgggttgctctggtacctctatcttcaactctatgattaataatatcataatcagaactctcttgattaaaacctttaagggaatagacttagatgagctgaacatggtggcctatggagatgacgtactggctagttacccttttcctattgattgtttagagctagctaagactggtaaagagtatggattgacaatgacacctgccgacaaatcgccttgcttcaatgaagtcacctgggagaatgccaccttcttgaaaaggggctttctaccagaccatcaattcccatttttaatccaccccacaatgcccatgagagaaatccatgaatccattcggtggactaaggatgcccgcaatacacaagatcacgtgcgctccttgtgcctgctggcttggcataacgggaaggaagagtatgaaaaatttgtgagcacaattagatcagtcccgattggaaaggcgctagctattcccaattttgagaatctgagaagaaattggcttgaattattct--a--aattacagttt-------------------------aaag---------------ctggaccc-caccagaa----atctggt------c-g-----agttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617109.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_C_CF193053_FRA_2012
------------------ttaaaa--cag-cct-gtgggttg-t-ccccacccaca-gggcccat-t-gggcgctagcacactggctttgcggagcctttgtgcgcct-g-ttttatg-----cccct---tacccctt-g-----aattg-gtaacttagaagt------------tttgcatacctgc-gaccaa-tagcgggcatgacgcaccagtcatgtcttgg-tcaagcacttctg-ttcccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgttatccggctggctacttcgagaaacc-cagtaacaccatgaaagttgcagagtgtttcgctcagca--cta-ccccc---gtgtagatcaggtcgatgagtcactgcg-aaccccacgggcgaccgtggcagtggctgcgctggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagtcagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatcatggctgcttatggtgacaattgaa-------ggattgttgccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----tatcta----tttgtt-gggtacgtccttc-----ttgacta--------------caagacccttcag-actcttaagtacatcttgtaccttaa--tcaaaaga-----gatgggagcacaagtctctactcagcggtccgggtcacatgagaattcaaactctgcatcag-aggggtcaaccataaattatacaaccataaattactacaaggatgcatatgctgcgagtgcaggccgccaggatatgtcccaagaccctaagaagttcaccgaccccgtcatggatgttatacacgagatggcgccaccactcaagtctccaagtgctgaagcatgtggttacagtgatcgcgtagcccagctcaccattggaaactccaccattacaacgcaggaagcagctaacatagttatagcctatggtgaatggcctgagtattgcccagacacagatgcaacggcagttgacaagccaacaaggccagatgtgtcagtgaacaggtttttcacgctagataccaaatcttgggccaagg------------------actcaaaggggtggtattggaagttccctgatgttttgacagaggtaggcgtttttggacagaatgctcagtttcattacttgtatcgatcagggttttgtgtgcacgttcagtgtaacgcaagtaaatttcaccagggtgctttgctggtggctgtgctgcctgagtatgtactcggcaccatcgctggaggaactggcaacg------agaattcacacccaccctatgccactacacagcctggacaggtcggcgcagtcttgacgcacccttacgtgctggatgcagggatccctttgagtcaattaaccgtgtgcccacaccaatggatcaacttgagaaccaataattgtgcgactatcatagtgccgtacatgaacacggtcccttttgactcagcccttaatcattgtaactttggtctgctggtcgttccagtagtgccattggacttcaacgcaggtgctacatctgagattcccatcacagttactatagcccctatgtgcgcagagttcgcaggtctccgccaggcagtgaaacaaggtattcctacagagctcaagcctggcactaatcagtttctcactacagatgatggagtctctgcaccaattctgccaggcttccacccaacccctcccatacatataccaggggaagtacacaatttgctggaaatatgcagggtagaaacaatcctggaagttaataa----------tctaaagaccaacgagaccactcct------atgcagcgcttgtgtttcccggtgtcggtacagagca------agacgggcgagttgtgtgccgcttttagagcagatcctggaagagatggcccgtggcagtccacaatattaggtcaactctgtaggtactacactcaatggtcaggttcactagaggtaacatttatgtttgcgggctctttcatggccacaggcaagatgctcattgcttatactccaccaggggggaatgtacctgcagataggatcacagcaatgctggggacgcatgtaatttgggattttgggctacaatcttctgtgacattggttataccatggattagtaacacacattatagagcgcatgctcgcactgggtactttgactattacaccactggtattataactatatggtaccagactaactacgtagtgcccattggtgcccccaccacggcatatattgtggccttggcggctgcccaggacaatttcaccatgaaattgtgcaaggatacagaagacattgaacaaacagctaatatacaaggggaccct--------attgcggatatgattg---accaaactgt--------------------------aagtaatcaggtaaatcgctccctaactgcactacaagtgttg--------cccacagctgccaacactgaggcaagtagccatagactgggcactggtgttgtaccagcactgcaagctgcggagacaggggcttcatcgaatgctagcgacaaaaacctcattgagactagatgcgtgctgaaccaccactctacacaagagacagctatcggaaacttcttcagccgtgctggtttggttagtattatcacaatgcccaccacgggcacaca-aaacacagacggttacgttaattgggacatcgacctcatgggatatgctcaactgcggcggaaatgtgaattgttcacctatatgcgtttcgacgccgaatttacgtttgttgtagccaaacctaacggcgagttagttccccaattattacagtacatgtacgtcccaccgggagccccgaagcccacctccagagactcgttcgcttggcagacagccaccaacccctctgtgtttgtgaaaatgacagacccaccagcccaagtgtctgttcctttcatgtcaccagccagcgcataccagtggttctatgatggttacccaacttttggtgaacacctccaagcaaatgacctggattacggtcagtgcccgaacaacatgatgggtacctttagcatcagaacagtggggactgagaagtcaccacattccattaccctgagagtgtatatgaggatcaaacatgttagggcatggataccaaggcccctaagaaaccagccctatttatttaagaccaacccaaattataaagggaa----tgacattaaatgcaccagcaccagtagggacaagat---cacgac---------------------------------------gttgggg------------------------------------------aagttcggacagcagtcgggagctatttatgtaggtaactacagagtggtgaacaggcacctcgccacgcataatgattgggcgaaccttgtgtgggaggacagctctagagacttgttagtctcctccaccaccgcccaggggtgtgacactatcgctaggtgtgattgccagaccggagtatattactgtaattctaaaagaaagcactacgcagttagcttcaccaagcctagtttaatctttgtggatgctagtgagtactatccggccaggtaccagtcccatcttatgcttgccccaggccactctgaacctggtgactgtggaggtattcttaggtgccagcacggtgttattgggatagtctccaccggagggaatggtctcgtgggttttgccgacgtgcgtgacctcctctggttggacgaagaggctatggagcagggggtctccgattacatcaaa-ggacttggcgatgcctttggtatgggcttcactgatgcagtatctagagaagtggaagctttgaaaaatcacctaattgggtcagagggtgcagtggaaaagatcctaaagaacctggtgaaactcatttcagctctagtcatagtcattagaagcgactatgacatggtcactctcacagcaaccctagcactaattggttgtcacgggagcccgtgggcctggatcaaatcaaaaacggcttccatactaggtatccctatggcacaaaaacagagtgcgtcttggctgaagaagttcaatgacatggcaagtgctgcaaaaggtctggaatggatttctaacaagatcagtaagttcattgattggctcaaagagaagattgtcccagctgctaaggagaaagtggagtttctaagcaatcttaaacaactaccc-ttgctggaaaaccagatatccaacctagagcagtctgctgcttcacaagaagatcttgaggctatgtttggaaatgtgtcgtacttagctca---------cttctgtcgcaagtttcaaccactctacgccactgaagcaaaaagagtctacgctctggaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattaggggctcaccaggtacaggtaaatcgcttgccacaggcattattgctagagccattgctgacaaatatcattccagtgtgtactccctacccccagacccagaccacttcgatgagtacaaacaacaagtagtcacagtcatggatgatctctgtcaaaacccagatggaaaggacatgtcactattttgtcaaatggtgtcaacagtagattttataccaccaatggcatcactggaagagaaaggagtgtctttcacctccaaatttgtcatcgcatcgaccaacgccagcaacataatagtcccaacagtctcagactcagacgcgattcgcagaagattctatatggactgcgacatagaagtgacagactcctacaagacagacctcggccggctagacgcaggtagagccgctaaactttgcacagaaaacaacagcgctaacttcaagagatgcagtccattagtgtgtggtaaagctatccaactaagagataggaagtccaaagtgagatatagtattgatactgtagtgtcagagctaatcagagagtataataacaggtctgcgattggtaacaccatagaagccctcttccaaggaccccctaaattcaagcctataagaatt---agccttgaagaaaaaccagccccagatgctatcagcgacctactcgctagtgtcgatagcgaggaggttcgacaatactgt-agagagcaagggtggataattccagaaacaccggccaatgtggaacgtcacctcaacagagcagtgttggtgatgcagtccatcgccaccgtggtcgcagttgtgtctcttgtctatgtcatttataaattgttcgctgggtttcagggcgcttattctggtgcgcccaagcaagttctcaagaagcccgtgctaagaacagccacggttcaaggaccgagcttagactttgccttgtccctcttaaggcgcaacattagacaggtgcaaaccgatcaaggacactttaccatgttaggggtgcgagatcgcctagccattctgccacgccacgcacaaccaggaaaaacaatatgggtcgaacacaaattaatcaatgtgctggacgctgtcgagctagtagacgagcaaggagtgaacttagaactaacactagtaaccttagacaccaacgaaaagtttagggacgttaccaaatttatcccagaggcaatcagtggtgctagcgacgctactctagtgatcaacacagaacacatgccatcaatgtttgtgccggtgggtgatgtcgtacagtacggttttctgaaccttagtggcaagcccacccacagaaccatgatgtacaacttccccaccaaagcaggccagtgtggaggtgtcgtcacctctgttggcaaaatcatcgggattcacatcggagggaacggtcgccagggtttctgcgctggtttgaaaagaagttactttgctagtgagcaaggggaaattcagtggatgaagcccaataaggaaactgggcgcttgaacatcaatggaccgactcgaaccaaactagaacccagtgtgtttcacgatgtgttcgagggaaacaaggagcctgcagttctaaccagcaaagaccctagactggaagttgattttgaacaggccctattctctaaatatgttggtaacacactgcatgagcctgatgagtatgtgactcaagctgctcttcactatgcaaaccaactaaaacagttgaacattgacaccggtaaaatgagcatggaggaagcatgttatggaacagacaacttagaagccatagatctgcacactagtgctggatacccttatagtgccttgggtatcaagaagagagatattctcgatccagtctccagggatgtcaccagaatgaagttttacatggacaagtatggcttagatctcccctattccacttatgtgaaagatgagcttaggtctctggacaaaatcaagaaaggaaaatcccgtttaattgaagctagcagtttgaacgactctgtctatctcagaatgaccttcggacacctgtatgaagtatttcatgctaacccagggaccataactggatcggcagtggggtgtaatcctgatgtgttttggagcaagttaccaattctgctgccaggtgcgctgttcgcatttgattactcagggtacgacgcaagtctcagtccagtgtggtttagagccttggaggtggttctccgcgagattggatattcagaagaagctatatcactcatagaggggatcaaccacactcaccatgtgtaccggaacaaaacgtactgtgtccttggtggaatgccatcgggttgctctggtacctctatcttcaactctatgatcaataatatcataatcagaactctcttgattaaaacctttaagggaatagacttagatgagctgaacatggtggcctatggagatgatgtactggctagttacccttttcctattgattgcttagagctagctaagactggtaaagagtatggattgacaatgacacctgccgacaaatcgccttgcttcaatgaaatcacctgggaaaatgccaccttcttgaaaaggggctttctaccagaccatcaattcccatttttaatccaccccacaatgcccatgagagaaatccatgaatccatccggtggactaaggatgcccgcaacacacaagatcacgtgcgctccttgtgcctgctggcttggcataatgggaaggaagagtatgaaaaatttgtgagcacaattagatcagtcccgattggaaaggcgctagctattcccaattttgagaatctgagaagaaattggcttgaattattct--a--atttacagttt-------------------------aaaa---------------ctggaccc-caccagaa----atctggt------c-g-----agtcaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617108.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_C_CF178036_FRA_2012
------------------ttaaaa--cag-cct-gtgggttg-t-ccccacccaca-gggcccac-t-gggcgctagcacactggctttacggagcctttgtgcgcct-g-ttttatg-----cccct---tccccctt-a-----aattg-gtaacttagaagt------------tttgcacacctgc-gaccaa-tagcgggcatgacgcgccagtcatgtcttgg-tcaagcacttctg-ttcccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgtcacccggctggctacttcgagaaacc-cagtagcatcatgaaagttgcagagtgtttcgctcagca--cta-ccccc---gtgtagatcaggtcgatgagtcactgcg-aaccccacgggtgaccgtggcagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagccagtggtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttatcatggctgcttatggtgacaattgaa-------ggattgttaccatatagctattggattggccatccgg--tgtctaacagagctattgtt-----tttcta----tttgtt-ggatacgtccctc-----ttgatta--------------taaggcccttcag-actcttaagtatatcttgtgccttaa--tcaaaaga-----gatgggagcacaagtttctacccagcggtccgggtcgcatgagaattcaaactctgcatcag-aggggtcaactataaattatacaaccataaattactacaaggatgcatatgctgcgagtgcaggccgccaggatatgtcccaagaccctaagaagttcactgaccctgtcatggatgttatacacgagatggctccaccactcaagtctccaagtgccgaagcatgtggttacagtgatcgcgtggcccagctcaccattggaaactctaccatcacaacacaggaagcagctaatatagttatagcctatggcgagtggcctgagtattgcccagatacagatgcaacggcagttgataagccaacaagaccagatgtgtcagtgaacaggtttttcacgctagataccaaatcttgggccaagg------------------actcaaaggggtggtattggaagttccctgatgttttaacagaggtaggcgtttttggacagaatgctcagtttcactacttgtatcgatcaggattttgtgtacatgttcagtgtaacgcaagtaaatttcaccagggcgctttgttggtggccgtgttgcctgagtatgtactcggcaccattgctggaggaactggtaacg------agaattcacacccaccctatgccactacgcagcctggtcaagtcggcgcgatcttgacgcacccttacgtgctggatgcagggatccctttgagtcaattaaccgtgtgcccacatcagtggatcaacttgagaactaataattgtgcaactatcatagtgccgtacatgaacacggtcccttttgattcagcccttaatcattgtaactttggtctgctggtcgttccagtagtgccattggacttcaatgcaggtgccacatctgagattcccatcacagtcactatagcccctatgtgcgcggagttcgcaggtctccgccaggcagtgaaacaaggtattcctacagagctcaagcctggcactaaccagtttctcactacagacgatggggtctctgcaccaattctgccaggcttccacccaacccctcccatacatataccaggagaagtacacaatttgctggaaatatgcagggtagaaacgatcctggaagtcaataa----------tctgaagaccaacgagaccactccc------atgcagcgcttgtgtttcccggtgtcggtgcagagca------agacgggcgagttgtgtgccgcttttagagcagatcccggaagagatggcccgtggcagtccacaatattaggtcaactctgtaggtactacactcaatggtcaggttcactagaggtaacattcatgtttgcgggctcttttatggccacaggcaagatgctcattgcttacaccccaccagggggaaatgtacctgcagataggatcacagcaatgctggggacgcatgtaatttgggattttgggctacaatcttctgtgacattggtcataccatggattagtaacacacattatagagcgcatgcgcgtactgggtattttgactattacaccactggcatcataactatatggtatcagactaactacgtggtgcccattggtgcccccaccacggcatatattgtggccttggcggctgcccaggacaatttcaccatgaaattgtgcaaggatacagaagacatcgaacagacagctaatatacagggggacccc--------attgcggacatgattg---accaaactgt--------------------------aagcagtcaggtaaatcgctctttaactgcactacaagtattg--------cccacagctgccaacactgaggcaagtagccatagactgggcactggtgttgtaccagcactgcaagcagcggagacaggggcttcatcaaacgctagtgacaaaaatctcattgagactaggtgtgtgctaaaccaccactctacacaagaaacagcaatcgggaacttcttcagccgtgctggtttggttagcattatcacaatgcccactacgggcacaca-gaacacagatggttacgttaattgggacatcgacctcatgggatatgctcaactgcggcggaaatgcgaattgttcacctacatgcgtttcgatgccgaatttacatttgttgtagccaaacctaacggcgagttagttccccaactattacagtacatgtacgtcccgccgggagctccgaaacccacctccagagactcgtttgcttggcagacagccaccaacccctctgtgtttgtaaaaatgacagacccaccagctcaagtgtctgttcctttcatgtcaccagccagcgcataccagtggttttatgatggttacccaacttttggtgaacacctccaagcaaatgacctggattacggccagtgcccgaacaacatgatgggtacctttagcatcagaacagtgggaactgagaagtcaccacattccattaccctgagagtgtatatgaggatcaagcatgttagggcatggataccaagacccctaagaaatcagccctatttatttaagaccaacccaaattataaagggaa----tgatattaaatgcaccagcactagtagggacaagat---tacgac---------------------------------------gttgggg------------------------------------------aagtttggacagcagtcgggggctatctatgtgggtaactacagagtggtaaacaggcacctcgccacgcacaatgattgggcgaacctcgtatgggaggacagctctagagacttgttagtctcctccaccaccgcccaggggtgcgacactattgccaggtgcgattgccagaccggagtgtattactgtaattctaagagaaagcactacgcagttagcttcaccaagcccagtttgatttttgtggatgctagtgagtactatccggccagatatcagtcccatcttatgcttgcctcaggccactctgaacctggtgactgcggaggcattctcaggtgccagcacggtgttattgggatagtctccaccggagggaatggtctcgtaggttttgccgacgtgcgtgatctcctctggttggacgaggaagctatggagcagggggtctccgattatatcaaa-ggtcttggcgacgcctttggcatgggcttcactgatgcagtatctagagaagtggaggctttaaaaacccacctagttggctcagaaggtgcagtggaaaagatcctaaaaaacctggtgaagcttatttcagctctagtcatagttattagaagtgactatgacatggtcaccctcacggcaaccctagcactaattggttgtcacgggagtccgtgggcctggattaaatcaaaaacggcttctatactaggtatccctatggcgcaaaaacagagtgcgtcttggctgaagaagttcaacgacatggcaagcgctgcaaaaggtctggaatggatttctaacaagatcagtaagttcattgactggctcaaagagaagattatcccagctgctaaagagaaagtggagtttctaagcaatcttaaacaattaccc-ttgttggaaaaccagatatccaatctagagcagtctgccgcttcacaagaagatctcgaggctatgtttggaaatgtgtcgtacttagctca---------cttctgtcgcaagtttcaaccactctacgccgctgaggcaaaaagagtttacgctctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattaggggctcaccaggtacaggtaaatcgcttgccacaggcattattgctagagctattgctgacaaatatcattccagtgtgtactccctacccccggacccggatcacttcgatgggtacaaacaacaagtggttacagttatggatgacttgtgtcagaaccctgatggtaaggacatgtccttattctgtcagatggtgtcaactgtggattttatccccccaatggcgtcattggaagaaaaaggggtgtctttcacttccaaatttgtcatcgcgtctactaacgctagcaacatcattgtccccactgtctcagattcggacgcgatccgtaggagattcttcatggactgtgacatcgaagtgactgactcctacaagacagaccttggccggctagatgcgggtagagccgctaaactttgttcagaaaacaatactgccaattttaagagatgtagtccactggtgtgcggtaaagccattcaactgagagacaggaagtcaaaagtaagatatagtgttgataccgtggtgtcagagctaattagggagtacaacaataggtcagctgtaggcaacaccattgaggcactcttccaagggcccctgaaatttagaccaatcagaata---agtctggaggagaaaccagccccagatgctatcagcgacctgttagctagtgtggacagtgaagaagtacgccagtactgt-agagatcaagggtggatagtacctgagatgccaactaacgtcgagcgtcatcttaatagggctgttcttgttatgcaatccatagcgacggtggtggcggtggtctcacttgtctatgttatctataagctatttgctggatttcaaggggcatactctggggctccaaaacaggcactaaagaagccagtcttgagaacagctactgtgcagggacctagtttggacttcgctctgtcacttttgcgtcgcaacattagacaagtgcagacagatcagggccatttcacaatgctcggtgtccgtgaccggttagccatcttgccgcggcatgcacaaccagggaaaacaatatgggttgaacacaagctagtcaacattttggacgctgtcgagctagtcgatgagcagggagtgaacttggaactaaccctagtaaccctagacaccaatgagaaatttagggacgtcaccaaatttatcccagagacaattagtggtgctagcgacgctactctagtgattaacacagagcatatgccatcaatgtttgtgccggtgggtgatgtcgtacagtacggttttctgaaccttagtggcaagcccacccacagaaccatgatgtataacttccccactaaagcaggccagtgtggaggtgtcgtcacctctgttggcaaaatcatcgggattcacatcggagggaacggtcgtcagggtttctgtgctggtttgaagaggagttatttcgctagtgagcaaggggaaattcagtggatgaagcccaataaggaaactgggcgtttgaacatcaatggaccgacccgaaccaaactagaacccagtgtgttccacgatgtgttcgaggggagcaaagaacctgcagttttaaccagcaaagaccctagactggaagttaattttgaacaggccctattctctaaatacgttggtaacacactgcacgagcctgatgagtatgtgactcaagccgctcttcactatgcaaaccaactaaaacagttgaacattgacaccggtaaaatgagcatggaggaagcgtgctatggaacagacaacctagaagccatagatctgcacactagtgctggatacccttatagtgctttgggtatcaagaagagagacattctcgacccggtctccagggatgtcaccagaatgaagttttacatggacaagtatggcttggatctcccctattctacttatgtgaaagatgagcttaggtctctggacaaaatcaagaaaggaaaatcccgtttaattgaagctagcagtttgaatgactctgtctatctcagaatgaccttcggacacctgtatgaagtgtttcatgccaacccagggaccataactggatcagcagtggggtgtaatcctgacgtgttttggagcaagttaccaattctgctgccaggtgcgctgttcgcatttgattactcagggtacgacgcaagtctcagtccagtgtggtttagagccctagaggtggttctccgcgagattggatattcagaagaagctgtatcactcatagaggggatcaaccacactcaccatgtgtaccggaacaaaacatattgtgtccttggtggaatgccatcaggttgctctggcacctctatcttcaactctatgatcaataacatcataatcagaactctcttaattaaaacctttaagggaatagacttagatgagctgaacatggtggcctatggagatgatgtactggctagttacccttttcctattgattgtttagagctggctaagactggcaaagagtatggattgacaatgacacctgccgataaatcgccttgcttcaatgaagtcacctgggaaaacgccaccttcttgaagaggggctttctaccagatcatcaattcccatttttaatccaccccacaatgcctatgagagaaatccatgaatccattcgatggactaaggacgcccgcaacacacaagaccacgtgcgctccttgtgcctgctggcttggcataatgggaaggaagagtatgaaaaatttgtgagcacaattagatcagtcccgattggaaaggcgctagccattcccaattttgagaatctgagaagaaattggctcgaactatttt--a--atttacagttt-------------------------aaaa---------------ctggaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617111.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_C_PAR155055_FRA_2014
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactggctctacggggcctttgtgcgcct-g-ttttatg-----cccct---ttccccct-a-----aattg-gtaacttagaagt------------tttgcacacctgc-gaccaa-tagcaggcatgacgcgccagtcatgtcttgg-tcaagcacttctg-ttcccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgtcatccggctggttacttcgagaaacc-cagtagcatcatgaaagttgcagagtgtttcgctcagca--cta-ccccc---gtgtagatcaggtcgatgagtcactgcg-aaccccacgggtgaccgtggcagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagccagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacataccctcaatcca-ggggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttattatggctgcttatggtgacaattgaa-------ggattgttaccatatagctgttggattggccatccgg--tgtctaacagagctattgtt-----tatcta----tttgtt-ggatacgtccctc-----ttgatta--------------caaggcccttcag-actctcaagtgcatcttgtaccttaa--tcaaaaga-----gatgggagcgcaagtctctacccagcggtccgggtcgcatgagaattcaaactctgcatcag-agggatcaactataaattatacaactataaattactacaaggatgcatatgctgcgagtgcaggccgccaggacatgtcccaagaccctaagaagttcactgaccccgttatggatgttatacacgaaatggccccaccactcaagtctccaagtgccgaagcatgtggttacagtgatcgcgtagcccaacttaccattggaaactctaccatcactacacaggaggcagctaacatagttatagcctatggcgagtggcctgagtattgcccagatacagatgcgacggcagttgataagccgacaagaccagatgtgtcagtgaacagatttttcacgctagataccaaatcttgggccaagg------------------actcaaaggggtggtattggaagttccctgatgttttgacagaggtaggcgtttttggacagaatgctcagtttcactacttgtatcgatcagggttttgtgtacacgttcagtgtaacgcaagtaaatttcaccagggcgctttgttggtggctgtgttgcctgagtatgtacttggtaccattgctggaggaactggcaacg------agaattcacacccaccctatgccactacacagccaggccaggtcggcgcggtcttgacgcacccttacgtgctggatgcagggattcctttgagtcaattaaccgtgtgcccacatcagtggatcaacttgagaaccaacaattgtgcgactatcatagtaccgtacatgaacacggtcccttttgattcagcccttaatcattgcaactttggtctgctggtcgttccagtagtgccattggacttcaacgcaggtgccacatctgagattcccatcacagtcactatagcccctatgtgcgcggagttcgcaggcctccgccaggcagtgaaacagggtattcctacagagctcaagcctggcactaaccagtttctcactacagatgatggggtctccgcaccaattctgccaggcttccacccaacccctcctatacatataccaggagaagtacacaatttgctggagatatgcagggtagaaacaatcctggaagttaataa----------tttaaagaccaatgagaccactcct------atgcagcgcttgtgtttcccggtgtcggtgcagagca------agacgggcgagttgtgtgccgcttttagagcagatcccggaagagatggcccgtggcagtccacaatattaggtcaactctgtaggtactatactcaatggtcaggttcactggaggtaacattcatgtttgccggctctttcatggccacaggcaagatgctcattgcttacactccaccagggggaaatgtacctgcagataggatcacagcaatgctggggacgcatgtaatttgggattttgggttacaatcttctgtgacattggtcataccttggatcagcaacacacattatagagcgcatgctcgtactgggtactttgactattacaccactggcatcataactatatggtatcagactaactacgtggtgcccattggcgcccccaccacagcatatattgtggctttggcggctgcccaggacaatttcaccatgaaattatgcaaggatacagaggacattgaacaaacagctaatatacagggggacccc--------attgcagacatgattg---accaaacagt--------------------------gagcaatcaggtaaatcgctccctaactgcactacaagtatta--------cccacagctgccaacactgaggcaagtagccataggctgggcaccggtgttgtaccagcactgcaagctgcggagacaggggcttcatcaaacgctagtgacaaaaatctcattgagactaggtgtgtcttaaaccaccactctacacaagagacagccatcggaaacttctttagccgtgctggtttggttagcattatcacaatgcccactacgggcacaca-gaacacagatggttacgttaattgggacattgacctcatgggatatgctcaactgcggcggaaatgtgaactgttcacctacatgcgtttcgatgccgagtttacatttgttgtagccaaacctaacggcgagttagttccccaattattacaatacatgtacgtcccaccgggagcaccgaaacccacctccagagactcgtttgcttggcagacagccaccaacccctctgtgtttgtgaaaatgacagacccgccagctcaagtgtccgttcctttcatgtcaccagctagtgcatatcagtggttttatgatggctacccaacttttggtgaacacctccaagcaaatgacctggattacggccagtgtccgaacaacatgatgggcacctttagcattagaacagtgggaactgagaagtcaccacactccattaccctgagagtatatatgaggatcaagcatgttagggcgtggataccaagacctctgagaaatcagccctatttatttaagaccaacccaaattataaagggaa----tgatattaaatgcaccagcactagtagggataaaat---tacgac---------------------------------------gctgggg------------------------------------------aagtttggacagcagtcgggggctatctatgtgggtaactacagagtggtaaacaggcacctcgccacgcataatgattgggcgaacctcgtatgggaggacagctctagagacttgttagtctcctccaccaccgcccaggggtgtgacactattgccaggtgtgattgccagaccggagtgtactactgtaattctaagagaaagcactacgcagttagcttcaccaagcctagtttaatttttgtggatgctagtgagtactatccggccagatatcagtcccatcttatgcttgccccaggtcactctgaacctggcgactgtggaggcattcttaggtgccagcacggtgttattgggatagtttccaccggagggagtggtctcgtgggttttgccgacgtgcgtgacctcctctggttggacgaggaagccatggaacagggggtctccgattacatcaaa-ggtcttggcgacgccttcggcatgggcttcactgatgcagtatctagagaagtggaagctttgaaaaatcacctaattggctcagagggtgcagtggaaaagatcttaaagaacctggtgaagctcatttcagctctggttatagttattagaagtgactatgacatggttaccctcacggcaaccctggcactaattggttgtcacgggagcccgtgggcctggattaaatcaaaaacggcttctatactaggtatccctatggcacaaaaacagagtgcgtcttggctgaagaagttcaacgacatggcaagcgctgcaaaaggtttggaatggatttctaataagattagtaagttcatcgactggctcaaagagaagattatcccagctgctaaagagaaagtggagtttctaagcaatcttaaacaactacct-ttgttggaaaaccagatatccaacctagagcagtctgccgcttcacaagaagatctcgaggctatgtttggaaatgtatcgtacttagctca---------cttctgtcgcaagtttcaaccactctatgccactgaggcaaaaagagtctacgctctagaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattaggggctcaccaggtacgggtaaatcgcttgccacaggcattattgctagagccattgctgacaaatatcattccagtgtgtattccctacccccggatccggatcacttcgacgggtacaaacaacaagtggttacagttatggatgacttgtgtcagaaccctgatggcaaggacatgtccttattctgtcagatggtgtcaactgtggattttatccccccaatggcgtcactggaagagaaaggggtgtctttcacttccaaatttgtcatcgcatctactaacgctagcaacatcattgtccccactgtctcagattcggacgcgattcgtaggagattctttatggactgtgacatcgaagtgactgactcctacaagacagaccttggccggttagatgcgggtagagccgctaaactttgttcagagaacaatactgccaattttaaaagatgtagtccactggtgtgtggtaaggccattcaactgagagacaggaagtcaaaagtaaggtatagtgttgataccgtggtgtcagagctaattagggagtacaacaatagatcagctgtaggcaacaccattgaggcactcttccaagggcccctgaaatttagaccaatcaaaata---agtctagaggagaaaccagccccagatgctatcagcgacctattagctagtgtggacagtgaagaagtacgtcagtactgt-agagatcaagggtggatagtacctgagacgccaactaacatcgagcgtcatcttaacagggctgttcttgttatgcaatccatagcgacagtagtggcagtggtctcactagtctatgtcatctataagctatttgccggtttccagggggcatactctgggactccgaaacaggtactaaagaagccagtcttgagaacagctactgtacagggccctagtttggacttcgctctgtcactcttacgtcgcaacattagacaagtgcagacggatcagggccatttcacaatgcttggtgttcgtgaccggttagctatcttgccgcggcatgcacaaccagggaaaacaatatgggttgaacacaagctggtcaacatattggacgctgtcgagctagtcgacgaacagggagtgaatttagagttgaccctagtaaccctggacaccaatgagaagtttagggacgtcaccaaatttatcccagaaacaatcagtggtgctagcgacgctactctagtgatcaacacagagcacatgccatcaatgtttgtaccggtgggtgatgttgtacagtacggctttctgaaccttagtggcaagcccacccacaggaccatgatgtacaacttccccaccaaagcaggccagtgtggaggtgttgtcacctctgttggcaaaatcatcgggatccacatcggagggaacggtcgtcagggtttctgtgctggtttgaagaggagctattttgctagtgagcaaggggaaatacagtggatgaagcccaataaggaaactgggcgtttgaacatcaatggaccgacccgaaccaaactagaacccagtgtgttccacgatgtgttcgagggaaataaagaacctgcagttctaaccagcaaagaccctagactggaagtcgatttcgagcaggccctattctctaagtatgttggtaacacactgcacgagcctgatgagtatgtgactcaagccgctctacactatgcaaaccaactaaaacagttgaacattgacaccggtaaaatgagcatggaggaagcatgttatggaacagacaacctagaagccatagatctacacactagtgctggatacccatatagtgctttgggtatcaagaagagagatattctcgatccggtctctagggatgtcaccagaatgaagttttacatggacaagtatggcttggatctcccctattctacttatgtgaaagatgagcttaggtctctggacaaaatcaagaaaggaaaatcccgtttaattgaagctagcagtttgaatgactctgtctatctcagaatgaccttcggacacctgtatgaagtgtttcatgctaacccagggaccataactggatcagcagtggggtgtaatcctgatgtgttttggagcaagttaccaattttgctgccaggtgcgctgttcgcatttgattattcagggtacgacgcaagtctcagtccagtgtggtttagagccttagaggtggttcttcgtgagattggatactcagaagaagctatatcactcatagaggggatcaaccacactcaccatgtgtaccggaacaaaacatattgtgtccttggtggaatgccatcaggttgctctggcacctctatcttcaactctatgatcaataacatcataatcagaactctcttaattaaaacctttaagggaatagacttagatgagctaaacatggtggcctatggagatgatgtactggctagttacccttttcctattgattgtttagagttggctaaaactggcaaagagtatggattgacaatgacacctgccgacaagtcgccttgcttcaatgaaatcacctgggaaaacgccaccttcttgaaaaggggctttctaccagatcaccaattcccatttttaatccaccccacaatgcctatgagagaaatccatgaatccattcgatggactaaggacgctcgtaacacacaagaccacgtgcgctccttgtgcttgctggcttggcataatgggaaggaagagtatgaaaaatttgtgagcacaattagatcagtcccgattggaaaggcgctagccattcccaattttgagaacctgagaagaaattggctcgaattattct--a--atttacagttt-------------------------gaaa---------------ctggaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617112.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA16_C_MET171023_FRA_2014
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacactggctttacggggcctttgtgcgcct-g-ttttatg-----cccct---t-ccccct-a-----aattg-gtaacttagaagt------------tttgcacacctac-gaccaa-tagcaggcatgacgcgccagtcatgtcttgg-tcaagcacttctg-ttcccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgtcatccggctggttacttcgagaaacc-cagtagcatcatgaaagttgcagagtgtttcgctcagca--cta-ccccc---gtgtagatcaggtcgatgagtcactgcg-aaccccacgggtgaccgtggcagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagccagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacataccctcaatcca-ggggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttattatggctgcttatggtgacaattgaa-------ggattgttaccatatagctgttggattggccatccgg--tgtctaacagagctattgtt-----tatcta----tttgtt-ggatacgtccctc-----ttgatta--------------caaggcccttcag-actctcaagtacgtcttgtaccttaa--tcaaaaga-----gatgggagcgcaagtctctacccagcggtccgggtcgcatgagaattcaaactctgcatcag-agggatcaactataaattacacaactataaattactacaaggatgcatatgccgcgagtgcaggccgccaggatatgtcccaagaccctaagaagttcactgaccccgttatggatgttatacacgaaatggccccaccactcaagtctccaagtgccgaagcatgtggttacagtgatcgcgtagcccaacttaccattggaaactctaccatcactacacaggaggcagctaacatagttatagcctatggcgagtggcctgagtattgcccagatacagatgcaacggcagttgataagccgacaagaccagatgtgtcagtgaacagattcttcacgctagataccaaatcttgggccaagg------------------actcaaaggggtggtattggaagttccctgatgttttgacagaggtaggcgtttttggacagaatgctcagtttcactacttgtatcgatcagggttttgtgtacacgttcagtgtaacgcaagtaaatttcaccagggcgctttgttggtggctgtgttgcctgaatatgtacttggtaccattgctggaggaactggcaacg------agaattcacacccaccctatgccactacacagccaggccaggtcggcgcggtcttgacgcacccttacgtgctggatgcagggattcctttgagtcaattaaccgtgtgcccacatcagtggatcaacttgagaaccaataattgtgcgactatcatagtaccgtacatgaacacggtcccttttgactcagcccttaatcattgcaactttggtctgctggtcgttccagtagtgccattggacttcaacgcaggtgccacatctgagattcccatcacagtcactatagcccctatgtgcgcggagttcgcaggcctccgccaggcagtgaaacagggtattcctacagagctcaagcctggcactaaccagtttctcactacagatgatggggtctccgcgccaatcctgccaggcttccacccaacccctcctatacatataccaggagaagtgcacaatttgctggagatatgcagggtagaaacaatcctggaagttaataa----------tctaaagaccaatgagaccactcct------atgcagcgcttgtgtttcccggtgtcggtacagagca------agacgggcgagttgtgtgccgcttttagagcagatcccggaagagatggcccgtggcagtccacaatattaggtcaactctgtaggtactatactcaatggtcaggttcactggaggtaacattcatgtttgccggttctttcatggccacaggcaagatgctcattgcttacactccaccagggggaaatgtacctgcagataggatcacagcaatgctggggacgcatgtaatttgggattttgggttacaatcttctgtgacattggtcataccttggatcagcaacacacattatagagcgcatgctcgcactgggtactttgactattacaccactggcaccataactatatggtatcagactaactacgtggtgcccattggtgcccccaccacagcatatattgtggctttggcggctgcccaggacaattttaccatgaaattatgcaaggatacagaggacattgaacaaacagctaatatacagggggacccc--------attgcggacatgattg---accaaactgt--------------------------gagcaaccaggtaaatcgctccctaactgcactacaagtatta--------cccacagctgccaacactgaggcaagtagccataggctgggcaccggtgttgtaccagcattgcaagctgcggagacaggggcttcatcaaacgctagtgacaaaaatctcattgagactaggtgtgtgttaaaccaccactctacacaagagacagccatcggaaacttctttagccgtgctggtttggttagcattatcacaatgcccactacgggcacaca-gaacacagatggttacactaattgggacattgacctcatgggatatgctcaactgcggcggaaatgtgaattgttcacctacatgcgtttcgatgccgaatttacatttgttgtagccaaacccaacggcgagttagttccccaattattacaatacatgtacgtcccaccgggagcaccgaaacccacctccagagactcgtttgcttggcaaacagccaccaacccctctgtgtttgtgaaaatgacagacccgccagctcaagtgtccgttcctttcatgtcaccagctagtgcataccagtggttttatgatggctacccaacttttggtgaacacctccaagcaaatgacctggattacggccagtgcccgaacaacatgatgggcacctttagtattagaacagtgggaactgagaagtcaccacactccattaccctgagagtgtatatgaggatcaagcatgttagggcgtggataccaagacctctgagaaatcagccctatttatttaagaccaacccaaattataaagggaa----tgatattaaatgcaccagcactagtagggataaaat---cacgac---------------------------------------gttgggg------------------------------------------aagttcggacagcagtcgggggccatctatgtgggtaactacagagtggtaaacaggcacctcgccacgcataatgattgggcgaacctcgtatgggaggacagctctagagacttgttagtctcctccaccaccgcccaggggtgtgacactattgccaggtgtgattgccagtccggagtgtactactgtaattctaagagaaagcactacgcagttagcttcaccaagcctagtttaatttttgtggatgctagtgagtactatccggctagatatcagtcccatcttatgcttgccccaggtcactctgaacctggcgactgtggaggcattcttaggtgccagcacggtgttattgggatagtctccaccggagggaatggtctcgtgggttttgccgacgtgcgtgacctcctctggttggacgaggaagccatggaacagggggtctccgattacatcaaa-ggtcttggcgacgccttcggcatgggcttcactgatgcagtatctagagaagtggaagctttgaaaaatcacctaattggctcagagggtgcagtggaaaagatcttaaagaacctggtgaagctcatttcagctctggttatagttattagaagtgactatgacatggttaccctcacggcaaccctggcactaatcggttgtcacgggagcccgtgggcctggattaaatcaaaaacggcttccatactaggcatccctatggcacaaaaacagagtgcgtcttggctgaagaagttcaacgacatggcaagcgctgcaaaaggtttggagtggatttctaacaagattagtaagttcatcgactggctcaaagagaagattattccagctgctaaagagaaagtggagtttctaagcaatcttaaacaactacct-ttgttggaaaatcagatatccaacctagagcagtctgccgcttcacaagaagatctcgaggctatgtttggaaatgtatcgtacttagctca---------cttctgccgcaagttccaaccactctatgccactgaggcaaaaagagtctacgctctagaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattaggggctcaccaggtacgggtaaatcgcttgccacaggcattattgctagagccattgctgacaaataccattccagtgtgtattccctacccccggatccggatcacttcgacgggtacaaacaacaagtggttacagttatggatgacttgtgtcagaaccctgatggcaaggacatgtccttattctgtcagatggtgtcaaccgtggattttatccccccaatggcgtcactggaagagaaaggggtgtcttttacttccaaatttgtcatcgcatctactaacgctagcaacatcattgtccccactgtctcagattcggacgcgattcgtaggagattctttatggattgtgacatcgaagtgactgactcctacaagacagaccttggccggttagatgcgggtagagccgctaaactctgttcagagaataatactgccaatttcaaaagatgtagtccactggtatgcggtaaggccattcaactgagagacaggaagtcaaaagtaaggtatagtgctgataccgtggtgtcagagctaattagggagtacaacaataggtcagctgtaggcaacaccattgaggcactcttccaaggacccctgaaatttagaccaatcaaaata---agtctagaggagaaaccagccccagatgctatcagcgacctgttagctagtgtggacagtgaagaagtacgtcagtactgt-agagatcaagggtggatagtacctgagacgccaactaacatcgagcgtcatcttaacagggctgttcttgttatgcaatccatagcgacagtggtggcagtggtctcactagtctatgtcatttataagctatttgctggtttccagggggcatactctggggctccgaaacaggtactaaagaagccagtcttgagaacagctactgtacagggccctagtttggacttcgctctgtcactcttacgtcgcaacattagacaagtgcagacagatcagggccatttcacaatgcttggtgttcgtgaccggttagctatcttgccgcggcatgcgcaaccagggaaaacaatatgggttgaacacaagctagtcaacattttggacgctgtcgagctagtcgacgaacagggagtgaatttagagttgaccctagtaactctggacaccaatgagaagtttagggacgtcaccaaatttatcccagagacaatcagtggtgctagcgacgctactctagtgatcaacacagagcacatgccatcaatgtttgtaccggtgggtgatgttgtacagtacggctttctgaatcttagtggcaagcccacccacagaaccatgatgtacaacttccccaccaaagcaggccagtgtggaggcgttgtcacctccgttggcaaaatcatcggaatccacatcggagggaacggtcgtcagggtttctgtgctggtttgaagaggagctattttgctagtgagcaaggggaaatacagtggatgaagcccaataaggaaactgggcgcttgaacatcaatggaccgacccgaaccaaactagaacccagtgtgttccacgatgtgttcgagggaaataaagaacctgcagttctaaccagcaaagaccctagactggaagtcgatttcgagcaggccctattctctaagtatgtcggtaacacactgcacgagcctgatgagtatgtgactcaagccgctctacactatgcaaaccaactaaaacagttgaacattgacaccggtaaaatgagcatggaggaagcatgttatggaacagacaacctagaagccatagatctgcacactagtgctggatacccctatagtgctttgggtatcaagaagagagatattctcgatccggtctctagggatgtcaccagaatgaagttttacatggacaagtatggcttggatctcccctattctacttatgtgaaagatgagcttaggtctctggacaaaattaagaaaggaaaatcccgtttaattgaagctagcagtttgaatgactctgtctatctcagaatgaccttcggacacctgtatgaagtgtttcatgctaacccagggaccataactgggtcagcggtggggtgtaatcctgatgtgttttggagcaagttaccaattttgctgccaggtgcgctattcgcatttgattactcagggtacgacgcaagtctcagtccagtgtggtttagagccttagaggtggttctccgtgagattggatacttagaagaagctatatcactcatagaggggatcaaccacactcaccatgtgtaccggaacaaaacatattgtgtccttggtggaatgccatcaggttgctctggcacctctatcttcaactctatgatcaataacatcataatcagaactctcttaattagaacctacaagggaatagacttagatgagctaaacatggtggcctatggagatgatgtactggctagttacccttttcctattgattgtttagagttggctaaaactggcaaagagtatggattgacaatgacacctgccgacaagtcgccttgcttcaatgaaatcacatgggaaaacgccaccttcttgaagaggggctttctaccagatcaccaattcccatttttaatccaccccacaatgcctatgagagaaatccatgaatccattcgatggactaaggacgctcgtaacacacaagaccacgtgcgctccttgtgcctgctggcttggcataatgggaaggaagaatatgaaaaatttgtgagcacaattagatcagtcccgattggaaaggcgctggccattcccaattttgagaacctgagaagaaattggctcgaattattct--a--atttacagttt-------------------------gaaa---------------ctggaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT588920.1_Coxsackievirus_A10_strain_CV-CNIC/Guizhou/CHN/14_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactctgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gtaacttagaagt------------tatgcacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggccgatgagtcactgca-caccccacgggtgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaacca-gaggg-tggtgcgtcgtaacgggaaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attcttataaaggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacactccat-----taacacc--------------taaatccttcaac-acattgcactacattctaacgttgaacacaagaaaa-------tgggagctcaagtctcgacgcaaaaatccggcagtcatgagactggtaacgtagccactg-gaggatctacaataaactttactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccaaagaaattcacgcaaccagtgttagattctattagagaattatcagcccctttgaattccccttctgtggaagcttgtggctatagtgatagggtcgctcagctcactgttggaaactcctccatcactacccaagaggctgctaacattgtactggcttatggagagtggcctgaatactgccctgacacagacgcaactgccgtggataaaccaactcgcccggatgtgtctgttaacagattctacactttggattccaaaatgtggcaagaaa------------------actcaactggctggtattggaagttccctgacgtgctgaataaaacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcgggtttctgcttacatgtgcagtgtaatgctagtaaatttcatcagggggctcttcttgtagctgtgataccagaatttgtgattgctggcagaggatctaacacaaaaccaaacg---aagcgccccacccaggatttgtcgcaactttccctggtaccaccggcgctacatttcatgatccatacgttctggattctggggtaccattgagtcaggctctaatatacccccatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgactcagccatcaaccatagcaactttgggctaatagtgataccagtaagtccgctgaagtattcgtccggggcaaccactgcaatcccaatcactatcactatagcccccctgaattcagagttcggaggactgcgacaagccgttagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccaggattcacccctacacctacaattcatataccaggggaagtacactctttgttggaattatgtagggtggagactattttggaagtgaacaa----------------caccactgaagcaacggga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccaggccggattggaccttggcaatctaccttagttggacaaatttgccggtattacacacaatggtccggttctttgaaggttacctttatgttcacaggatccttcatggcaacaggtaagatgctagtagcctactccccacccggaagcgctcaaccagccaacagagaaaccgccatgctgggtacgcacgtcatttgggactttggactacaatcgtcagtctctttggtgataccgtggatcagtaacactcacttccgcactgccaagacgggtgggaattacgattactacacagcaggtgtagtgaccctatggtatcaaaccaattacgtggtcccaccagaaacccctggagaagcatatattattgcaatgggggcggcacaagacaacttcactctgaagatttgcaaggatactgatgaagtgacgcaacaggctgtgttgcaaggtgaccct--------gtagaggatataatcc---atgacgctct--------------------------gggaaacacagcgcgcagggctatcagcagtgttacaaatgttgaat--------ccgcagccaacaccactcccagctcacaccgattagagactggacgcgtgccagcgctacaggctgcagagacgggtgccacttctaatgccacagatgagaacatgattgaaacccgttgtgtggtcaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgttctggattagtgggagtagtcaacctcacagatggggggacga----acactactgggtatgctacatgggacatagatataatgggctttgtccagctccgcagaaagtgcgagatgtttacatacatgaggttcaacgcagaattcacatttgtcacaacgactgagaatggagaggctcgtccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcaccgaccctcctgcacaagtctcagttcctttcatgtcaccagctagtgcatatcagtggttttatgatggttaccccacgttcggccagcacccggagacctcaaacacgacgtacggattgtgcccaaacaacatgatgggcacttttgcagtgagagttgttagtagggaggcaagccaactgaaactgcagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgatcaggtctcagccatacctgcttaaaaacttccccaattacgacagtag----caaaattgccaacagtgcacgggaccgatccagtat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaatttgggcaacaatctggcgccatctacgttggtaattacagggtggtcaataggcacctggccacccacaatgactgggctaacctggtgtgggaagatagttctcgagacctgcttgtttcgtctaccactgcccagggttgtgatacgattgcccgttgtgagtgtcagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagcttctctaagcctagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggccactctgaacctggggattgcgggggcatcttgaggtgtcagcatggtgtggttggcatagtgtccactggtggcaacggtcttgtcggttttgctaacgtgagggacctcttatggttggatgaagaagccatggaacagggagtgtctgactatatcaag-ggactcggcgacgctttcggtactggttttactgacgcagtgtctagggaagtggaggctctgaaaaatcacctgattggttccgagggagcggtggagaagatcctgaagaacttagtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcactcttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcatctatcttaggcattcctatggcacagaagcagagtgcatcttggcttaagaaattcaacgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaagaaaagattattccggccgcaaaggaaaaagttgagtttcttaataacctcaagcaactgcca-ttgatagaaaaccaaattgctaacttagaacagtctgccgcttcgcaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgtaagttccagccactctatgcaactgaagcaaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattattaggggctcaccaggaactggcaagtcgctcgccacaggtataatagcgagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatacaagcaacaggtggtgacagtcatggatgatttgtgtcaaaacccagacggcaaagatatgtcattgttttgtcaaatggtatccaccgtcgattttatacccccaatggcttcactggaagagaaaggtgtatccttcacatctaaatttgttattgcttcaactaatgccagcaacatcattgtccccacggtctcagactctgacgctattcgtaggagatttttcatggactgtgatatcgaagtgactgactcttacaaaacagacttaggccgcttggatgcggggagggccgcaaagctctgctcagagaacaatactgccaatttcaagaggtgcagcccgctagtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagcgtagacactgtggtatcagaattggttagggagtatactaacaggtccgctataggaaacactatagaagctttatttcaagggcctcctaaatttaggcctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtattgc-agagatcaaggatggataattcctgaagcaccaaccaatgtggagcggcatctcaatagggcagtattagtgatgcaatccatcactactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggtttccagggcgcatattctggagcgcccaagcaaactctcaagaagcctgtgttgaggacagccactgttcaagggcccagcttagattttgccctgtctctcctgcgacgtaacatcaggcaggtgcaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgcctcgctatcttacctcgtcactcacaaccagggaagactatctgggttgagcacaagttgatcaatgtgcttgatgctgttgagctagtagacgatcaaggtgttaatttagagcttacactagtaaccctagacactaatgagaagtttagagatatcactaagttcattccagaaaatatcagtggagccagtgatgccacattagtgattaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcagtacgggttcctaaatcttagtggtaagccaacccacaggaccatgatgtacaattttcccacaaaggctgggcagtgtggaggcgtggtaacatctgttggtaaaatcattggcatccacatcggaggcaatgggcgacaagggttctgcgctggcctgaagaggagttattttgcaagtgaacaaggtgagatccaatgggtgaaacctaataaggagaccggcagattaaatatcaatggcccaacacgcaccaagttagaacccagtgtgttccatgatgtgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattggaggttgactttgagcaagccctcttctccaagtatgtgggcaatgtcctgcacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaaccagctcaagcaactagatataaacaccaataagatgagcatggaggaagcgtgctacggcacagaaaacttggaagcaattgacctccacaccagcgcagggtacccatacagtgctctaggcataaagaagagggatatattggatcctaccactagggacacaacaaagatgaagttttacatggataagtatggcttggacttaccttattccacctacgttaaagatgaacttaggtctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgactcagtgtacctcagaatgacttttggccacctgtatgaagcatttcatgcaaatccagggactgtgaccggatcggcagttgggtgcaacccggatgtgttctggagtaaactcccaatcctactcccaggctcgctatttgcctttgactattcaggatatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgtcacttatagaaggaataaaccatacccatcatgtgtatcggaacaaaacatattgtgttcttggtgggatgccgtcaggatgttccggcacctccattttcaactcgatgatcaacaacatcatcatcaggacgcttttaatcaaaacctttaaagggatagatctagacgagttgaatatggtggcctatggagatgatgtgctagctagttatcctttccccattgattgccttgagctagctaagactggcaaagaatatgggctgaccatgacacctgcagacaaatcaccttgctttaatgaagtgacgtgggaaaacgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcctataatgcccatgaaggagatccacgaatccatacgctggaccaaagacgcgtgcaacacccaagatcatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaattagatcagtcccagttgggaaagcattggcaattccgaatttcgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP009574.1_Coxsackievirus_A10_strain_FY01/AH/CHN/2013_complete_genome
---------------------------------------ttg-t-acccacccaca-gggcccac-t-gggcgctagcactctgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gtaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggccgatgagtcactgcg-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaacca-gaggg-tggtgcgtcgtaacgggaaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----taacacc--------------taaatccttcaat-acattgcactacattctaacgttgaacacaagaaaa-------tgggagctcaagtctcgacgcaaaaatccggcagtcatgagactggtaacgtagccactg-gaggatctacaataaactttactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccaaagaaattcacgcaaccagtgttagattctattagagaattatcagcccctttgaattccccttctgtggaagcttgtggctatagtgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaacattgtactggcttatggagagtggcctgaatactgccctgacacagacgcaactgccgtggataaaccaactcgcccggatgtgtctgttaacaggttctacactttggattccaaaatgtggcaagaaa------------------actcaactggctggtattggaaattccctgacgtgctgaataaaacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcaggtttctgcttacatgtgcagtgtaatgctagtaaatttcaccagggggctcttcttgtagctgtgataccagaatttgtgattgctggcagaggatctaacacaaaaccaaacg---aagcgccccacccagggtttaccacaactttccctggtaccaccggcgctacatttcatgatccatacgttctggattctggggtaccattgagtcaggctctaatatacccccatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgactcagccatcaaccatagcaactttgggctaatagtgataccagttagtccgctgaagtattcgtccggggcaaccactgcaatcccaatcactatcactatagcccccctgaattcagagttcggaggactgcgacaagccgttagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccaggattcacccctacacccacaattcatataccaggggaagtacactctttgctggaattatgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccaggccggattggaccttggcaatctaccttagttggacaaatttgccggtattacacacaatggtccgggtctttgaaggttacctttatgttcacaggatccttcatggcaacaggcaagatgctagtagcctactccccgcccggaagcgctcaaccagccaacagagaaaccgccatgctgggcacgcacgtcatttgggactttggactacaatcatcagtctctttggtgataccgtggatcagtaacactcacttccgcactgccaagacgggtgggaattacgattactacacagcaggtgtagtgaccttatggtatcaaaccaattacgtggtcccaccagaaacccctggagaagcatatattattgcaatgggggcggatctctacaaattcactctgaagatttgcaaggatactgatgaagtgacacaacaggctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------gggaaacacagcgcgcagggctatcagcagtgttacaaatgttgaat--------ccgcagccaacaccactcccagttcacaccgattagagactggacgcgtgccagcgctacaggctgcagagacgggtgccacttctaatgccacagatgagaacatgattgaaacccgttgtgtggtcaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgttctggattagtgggagtagttaacctcacagatggggggacgg----acactactgggtatgctacatgggacatagatataatgggctttgtccaactccgcagaaaatgcgagatgtttacatacatgaggttcaacgcagaattcacatttgtcacaacgactaagaatggagaggctcgtccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcaccgaccctcctgcacaagtctcagttcctttcatgtcaccagctagtgcatatcagtggttttatgatggttaccccacgttcggccagcacccggagacctcaaacacgacgtacggattgtgcccaaacaatatgatgggcacttttgcagtgagagttgttagtagggaggcaagccaactaaaactgcagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgatcaggtctcagccatacctgcttaaaaacttccccaattacgacagtag----caagattgccaacagtgcacgggaccgatccagtat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaatgtgggcaaaactctgcatacatctacgttggtaattacagggtggtcaatagacacctggccacccacaatgactgggctaacctggtgtgggaagatagttctcgagacctgcttgtttcgtctaccactgcccagggttgcgatacgattgcccgttgtgagtgtcagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagcttctctaagcctagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggccactctgaacctggggattgcgggggtatcttgaggtgtcagcatggtgtggttggcatagtatccactggtggcaacggtcttgtcggttttgctaacgtgagggacctcttatggttggatgaagaagccatggaacagggagtgtctgactatatcaag-ggactcggcgacgctttcggtactggttttactgacgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttccgagggagcggtggagaagatcctgaagaacttagtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcactcttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggcattcctatggcacagaagcagagtgcatcttggcttaagaagttcaacgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaggaaaagattattccggccgcaaaggaaaaagttgagtttcttaataacctcaagcaactgcct-ttgatagaaaaccaaattgctaacttagaacagtctgccgcttcgcaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgtaagttccagccactctatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattatcaggggctcaccaggaactggcaagtcactcgccacaggtataatagcgagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatacaagcaacaggtggtgacagtcatggatgatttgtgtcaaaacccagacggcaaagatatgtcattgttttgtcaaatggtatccaccgtcgattttatacccccaatggcttcactggaagagaaaggtgtatccttcacatctaaatttgttattgcttcaactaatgccagcaacatcattgtccccacggtctcagactctgacgctattcgtaggagatttttcatggattgtgatatcgaagtgactgactcttacaagacagacttaggccgcttggatgcggggagggccgcaaagctctgctcagagaacaacactgccaatttcaagaggtgcagcccgctagtgtgcggtaaagccatccaactgagagacaggaagtccaaagtcaggtatagcgtagacactgtggtatcagaattggttagggagtataataacaggtccgctataggaaacactatagaagctttatttcaagggcctcctaaatttaggcctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgc-agagatcaaggatggataattcctgaagcgccaaccaatgtggagcggcatctcaatagggcagtattagtgatgcaatccatcgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcaaactctcaagaaacctgtgttgaggacagccactgttcaagggcccagcttagattttgccctgtctctcctgcgacgtaacatcaggcaggtgcaaaccgaccaagggcactttaccatgcttggggtgcgtgaccgcctcgctatcttacctcgtcactcacaaccagggaagaccatctgggttgagcacaagttgatcaatgtgcttgatgctgttgagctagtggatgatcaaggtgttaatttagagcttacactagtaactctagacaccaatgagaagtttagagatgtcaccaagttcattccanagaatatcagtggagccagtgatgccacattagtgattaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatacgggttcctaaatcttagtggtaagccaacccacaggaccatgatgtacaatttccccacaaaggctggacagtgtggaggcgtggtaacatctgttggtaaaatcattggcatccacatcggaggcaatgggcgacaagggttctgcgctggcctgaagaggagttattttgcaagtgaacaaggtgagatccaatgggtgaaacctaataaggagaccggcagattaaatatcaatggcccaacacacaccaagttagaacccagtgtgttccatgatgtgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattagaggttgactttgagcaagccctcttctccaagtatgtgggcaatgtcctccacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaaccagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctacggcacagagaacctggaagcaattgacctccacaccagcgcagggtacccatacagtgctctaggcataaagaagagggacatattggatcctaccactagggacacaacaaaaatgaagttctacatggataagtatggcttggacttaccttattccacctacgttaaagatgaacttaggtctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgactcagtgtacctcagaatgacttttggtcacctgtatgaagcattccatgcaaatccagggactgtgaccggatcagcagttgggtgcaatccggatgtgttctggagtaaactcccaatcctactcccaggctcgctatttgcctttgactattcaggatatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgtcactcatagaaggaataaaccatacccatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccgtcaggatgttccggcacctccattttcaactcgatgatcaacaacatcatcatcaggacgcttttaatcaaaacctttaaagggatagatctagacgagttgaatatggtggcctatggagatgatgtgctagctagttatcctttccccattgattgccttgagctagctaagactggcaaagaatatgggctgaccatgacacctgcagacaaatcaccttgctttaatgaagtgacgtgggaaaacgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcctataatgcccatgaaggagatccacgaatccatacgctggaccaaagacgcgtgcaacacccaagatcatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaatcagatcagtcccagttgggaaagcattggcaattccgaatttcgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289410.1_Coxsackievirus_A10_isolate_CV-A10/P978/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-taaccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaagcc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgctctcaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tctt---attttcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----taacacc--------------taagtccttcaat-acattgcactatattctaacgctgaacacgagaaga-------tgggagcacaagtctcgacgcaaaaatccggcagtcacgagactggtaacgtagccactg-gaggatctacaataaactttaccaacatcaactattataaagattcttacgctgcgtcagctacccggcaagacttcacacaggatccaaagaaattcacacaaccagtgttagattctattagagaactatcagcccctttaaactctccttctgtggaagcttgtggctatagtgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtactagcttatggagagtggcctgagtactgccctgatacagacgcaactgccgtggataaaccaactcgcccggacgtgtccgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------actcgactggttggtattggaaattccctgacgtgctgaataagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcaggtttctgtttgcatgtgcagagtattgctagtaaatttcaccagggggcccttcttgtggctgtaataccagaatttgtaattggtggcagaggatctaacacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggtaccaccggcgctacatttcatgatccatacgttctggattccggggtgccattgagtcaagctctaatatacccccatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgactcagccatcaaccatagcaattttgggctaatagtgataccagttagtccgctgaagtattcgtccggggcaaccactgcaatcccaatcactatcactatagcccccttgaattcagagttcggaggactgcgacaagccgtcagtcagggtatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgatactgcagcgcccatcctcccaggattcacccccacacccacaatccatatacccggggaagtgcactctttactggagttgtgtagggtggagaccattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccaggccggattggaccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggttacctttatgttcacaggatccttcatggcaacaggcaagatgctagtggcctactccccacccggaagcgctcaaccagccaacagagaaaccgccatgctgggcacgcatgtcatttgggactttggactacaatcgtcagtctctttggtgataccgtggatcagtaatacacacttccgcactgccaagacaggtgggaattacgattactacacggcaggtgtagtaaccttatggtatcaaaccaattacgtggtcccaccagaaacccctggagaagcatatattattgcaatgggggcagcacaagacaacttcactttgaagatttgcaaggacactgatgaagtgacacaacaggctgtgttgcaaggcgaccct--------gtggaggatataatcc---atgacgctct--------------------------gggaaacacagcgcgcagagctattagcagtgctacaaatgttgaat--------ccgcagccaacaccactcccagttcacaccgattagagactggacgcgtgccagcgctacaagctgcagagacgggtgccacgtctaatgccacagatgagaacatgattgaaacccgttgtgtggttaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgctctggactagtgggggtagtcaacctcacagatggggggacgg----acactactgggtatgcaacatgggacatagatattatgggctttgtccaactccgcagaaagtgcgaaatgttcacatacatgaggttcaacgcagaattcacatttgtcacaacgactgagaatggggaggctcgtccgtatatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcagttccttttatgtcaccagctagtgcatatcagtggttttatgatggttaccccactttcggtcagcacccggagacctcaaacacaacatatggattgtgcccaaacaatatgatgggcacttttgcagtgagagttgtcagtagggaggcaagccaactaaaactacaaactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgatcaggtctcaaccatacctgcttaaaaatttccccaattacgacagcag----caagattgccaacagtgcacgggaccgatccagtat---ca-------------------------------------------------------------------agcaagctaatatgggc--------aaatttgggcaacaatctggtgccatctacgttggtaattacagagtggtcaatagacacctggccacccacaatgactgggccaacctggtgtgggaagacagttcccgagacctgcttgtttcgtctaccactgctcagggttgcgatacgattgcccgttgtgagtgccagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgttttcgtagaggccagtgagtattaccctgctagatatcaatctcacctaatgctcgctgcaggccactctgaacctggggattgcgggggtatcttgaggtgtcaacatggtgtggttggcatagtatccactggtggcaacggtcttgtcggttttgctaacgtgagggacctcttatggttggatgaagaagccatggaacagggagtgtctgactacatcaag-ggactcggtgacgcttttggcgttggttttactgacgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttccgagggagcggtagagaagatcctgaagaacttagtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcaacgatatggcgaacgctgcaaagggattggagtggatctccaacaaaattagcaaatttattgattggcttaaggaaaagatcattccagccgcaaaagaaaaagttgagtttcttagtaaccttaagcaactgcct-ttgatagaaaaccaaattgccaacttagaacagtctgccgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattatcaggggctcaccaggaactggcaagtcactcgccacaggtataatagcgagagccattgccgacaaatatcactctagtgtgtactccctcccaccagacccagatcactttgatggatacaagcaacaggtggtgacagtcatggatgatttgtgtcaaaacccggacggcaaagatatgtcactgttttgtcaaatggtatccactgtcgattttatacctccaatggcctcactggaagagaaaggcgtatccttcacatctaaatttgtaattgcttcaactaatgctagcaacatcatcgtccccacggtctcagactctgacgctattcgtaggagattttttatggattgtgatatcgaagtgactgactcttacaagacagacttaggccgcttagatgcgggtagggccgcaaagctctgctcagagaacaacactgccaatttcaagaagtgcagcccgctagtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagtatagacactgtggtatcagaactggttagggagtataataacaggtccactataggaaacactatagaagctttatttcaagggcctcctaaatttaggcctataagaatt---aatcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgc-agagatcaaggatggataattcctgaagcgccaaccaacgtggaacggcatctcaatagggcagtattagtaatgcaatccatcgctactgtggtcgcagttgtatcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcagactctcaagaaacctgtgttgaggacggccactgttcaagggcccagcttagattttgccctgtctctcctgcggcgtaacatcaggcaggtgcaaactgaccaagggcactttaccatgcttggggtgcgtgaccgccttgctatcttacctcgtcactcacaaccagggaagaccatctgggttgagcacaagttgatcaatgtgcttgatgctgttgagctggtggatgaacaaggtgttaatttggagcttacattagtaaccctagacaccaatgagaagtttagagatgtcaccaagttcattccagagagtatcagtggagccagtgatgccacattagtaatcaacaccgaacacatgccatcaatgtttgtcccggtaggagatgttgttcactacgggttcctaaatcttagtggtaagccaacccacaggaccatgatgtacaatttccctacaaaggctggacagtgtggaggcgtggtaacatctgttggtaaaatcattggtatccacattgggggcaatgggcgacaagggttctgcgctggcctgaagaggagttattttgcaagtgagcaaggtgagatccaatgggtgaaacctaacaaggagaccggcagattaaatatcaatggcccaacacgcaccaagttagagcccagtgtgttccatgatgtgtttgagggcaacaaggagccagcagtcctaacgagcaaggatcccagattggaggttgactttgagcaagccctcttttccaagtatgtgggcaatgtcctccacgaacctgacgaatatgtgaagcaggcagccctccactacgcaaaccagctcaagcaactggatataaacaccagcaagatgagcatggaagaagcgtgctatggcacagagaacctggaagcaattgacctccacactagcgcagggtacccatacagtgctctaggcataaagaagagggacatactagatcctaccactagggacacaacaaaaatgaagttctacatggataagtatggcttggacttaccttactccacctacgttaaagatgaacttaggtctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgactcagtgtacctcagaatgacttttggccacctgtatgaagcatttcatgcaaatccagggactgtgaccggatcggcagtcgggtgcaatccggatgtgttctggagcaaactcccaattctgctcccaggctcgctatttgcctttgactattcaggctatgatgctagccttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgtcactcatagaaggaataaatcatacccatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccgtcaggatgttctggcacctccattttcaactcaatgatcaataacatcatcatcaggacgcttttaatcaaaacctttaaagggatagatctagacgagttgaatatggtggcctacggagatgatgtgctagctagttatcctttccccattgattgtcttgagctagctaagactggcaaagaatatgggctgaccatgacacccgcggacaaatcgccttgcttcaatgaagtgacgtgggaaaacgccaccttcctgaagagagggtttctaccagactatcaattcccattcttgattcatcctataatgcccatgaaagagatccacgagtccatacgctggaccaaagatgcgtgcaatacccaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaattagatcagtcccagttgggaaagcattggcaattccgaattttgagaatttgagaagaaattggctcgagctatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP009578.1_Coxsackievirus_A10_strain_FY05/AH/CHN/2013_complete_genome
---------------------------------------ttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tgtgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tgtccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagaccaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----taacacc--------------taagtccttcaat-acattgcactacattctaacgctgaacacaagaaaa-------tgggagcccaagtctcgacgcaaaaatctggcagtcacgagactggtaacgtagccactg-gaggatctacaataaactttactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaggatccaaagaaattcacacaaccagtgttagattctattagagaactatcagcccctttgaactccccttctgtggaagcttgtggctatagtgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtactagcttatggagagtggcctgagtactgtcctgacacagacgcaactgccgtggataaaccaactcgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------actcgactggttggtattggaaattccctgacgtgctgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcaggtttctgcttgcatgtgcagtgtaatgctagtaaatttcaccagggggcccttcttgtggctgtaataccagaatttgtaattgctggcagagggtctaacacaaaaccaaatg---aagcgccccacccggggtttaccacaactttccctggtaccaccggcgctacatttcatgatccatacgttctggattccggggtaccattgagtcaggctctaatatacccccatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgactcagccatcaaccatagcaattttgggctaatagtgataccagttagtccgctgaagtactcgtccggggcaaccactgcaatcccaatcactatcactatagcccccctgaattcagagttcggaggactgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccaggattcacccccacacccacaattcatataccaggggaagtacactccttactggagttgtgtagggtggagaccattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccaggccggattggaccttggcaatctaccttagttggacagatttgccggtactacacacaatggtccgggtctttgaaggttacctttatgttcacaggatccttcatggcaacaggcaagatgctagtggcctactccccacccggaagcgctcaaccagccaacagagaaaccgccatgctgggcacgcacgtcatttgggactttggactacaatcgtcagtctctttggtgataccgtggatcagtaacactcacttccgcactgccaagacaggtgggaattacgattactacacggcaggtgtagtgaccttatggtatcaaaccaattacgtggtcccaccagaaacccctggagaagcatatattattgcaatgggggcagacctctacatcttcactttgaagatttgcaaggatactgatgaagtgacacaacaggctgtgttgcaaggcgaccct--------gtggaggatataatcc---atgacgctct--------------------------gggaaacacagcgcgcagagctattagcagtgctacaaatgttgagt--------ccgcagccaacaccactcccagttcacaccgattagagactggacgcgtgccagcgctacaagctgcagagacgggtgccacttctaatgccacagatgagaacatgattgaaacccgttgtgtggttaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgctctggattagtgggggtagttaacctcacagatggggggacgg----acactactgggtatgctacatgggacatagatattatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgtcacaacgactgataatggggaggctcgtccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcagttcctttcatgtcaccagctagtgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatatggattgtgcccaaacaatatgatgggcacttttgcagtgagagttgtcagtaggaaggcaagccaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgatcaggtctcaaccatacctgcttaaaaacttccctaattacgacagtag----caagattgccaacagtgcacgggaccggtccagtat---ca-------------------------------------------------------------------agcaagctaatatgggt--------agatgtgggcaacactctgcatacatctacgttggtaattacagagtggtcaatagacacctggccacccacaatgactgggccaacctggtgtgggaagacagttctcgggacctgcttgtttcgtctaccactgctcagggttgcgatacgattgcccgttgtgagtgtcagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcaatctcacctgatgctcgctgcaggccactctgaacctggggattgcgggggtatcttgaggtgtcagcatggtgtgattggcatagtatccactggtggcaacggtcttgtcggttttgctaacgtgagggacctcttatggttggatgaagaagccatggaacagggagtgtctgactatatcaag-ggactcggcgacgcttttggtattggttttactgacgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttccgagggagcggtagagaagatcctgaagaacttagtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcaacgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaggaaaagatcattccggctgcaaaggaaaaagttgagtttcttaataaccttaagcaactgcct-ttgatagaaaaccaaattgccaacttagaacagtctgccgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctatgcaactgaagcgaagagagtgtacgccttagagaagagaataaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattatcaggggctcaccaggaactggcaagtcactcgccacaggtataatagcgagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatacaagcaacaggtggtgacagtcatggatgatttgtgtcaaaacccagacggcaaagatatgtcattgttttgtcaaatggtatccactgtcgattttatacccccaatggcttcactggaagagaaaggcgtatccttcacatctaaatttgtcattgcttcaactaatgctagcaacatcattgtccccacggtctcagactctgacgctattcgtaggagatttttcatggattgtgatatcgaagtgactgactcttacaagacagacttaggccgcttagatgcgggtagggccgcaaagctctgctcagagaacaacactgccaatttcaagaggtgcagcccgctagtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagcgtagacactgtggtatcagaactggttagggagtataataacaggtccgctataggaaacactatagaagctttatttcaagggcctcctaaatttaggcctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgc-agagatcaaggatggataattcctgaagcgccaaccaacgtggagcggcatctcaatagggcagtattagtaatgcaatccatcgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcagactctcaagaaacctgtgttgaggacggccactgttcaagggcccagcttagattttgccctgtctctcctgcggcgtaacatcaggcaggtgcaaaccgaccaagggcactttaccatgcttggggtgcgtgaccgccttgctatcttacctcgtcactcacaaccagggaagaccatctgggttgagcacaagttgatcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacactaataaccctagacaccaatgagaagtttagagatgtcaccaagttcattccagagaatatcagtggggccagtgatgccacattagtaatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatacgggttcctaaatcttagtggtaagccaacccacaggaccatgatgtacaatttccctacaaaggctggacagtgtggaggcgtggtaacatctgttggtaaaatcattggcatccacattggaggcaatgggcgacaagggttctgcgctggcctgaagaggagttattttgctagtgaacaaggtgagatccaatgggtgaaacctaacaaggagaccggcagattaaatatcaatggcccaacacgcaccaagttagagcccagtgtgttccatgatgtgtttgagggcaacaaggagccagcagtcctaacgagcaaggatcccagattagaggttgactttgagcaagccctcttctccaagtatgtgggcaatgtcctccacgaacctgacgaatatgtgaagcaggcagccctccactacgcaaaccagctcaagcaactggatataaacaccaataagatgagcatggaagaagcgtgctatggcacagagaacctggaagcaattgacctccacactagcgcagggtatccatacagtgctttaggcataaagaagagggacatactagatcctaccactagggacacaacaaaaatgaagttctacatggataagtatggcttggacttaccttactccacctacgttaaagatgaacttaggtctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgactcagtgtacctcagaatgacctttggccacctgtatgaggcattccatgcaaatccagggactgtgaccggatcagcagtcgggtgcaatccggatgtgttctggagtaaactcccaatcttactcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgtcactcatagaaggaataaatcacacccatcatgtgtatcggaacaaaacatattgtatccttggtgggatgccgtcaggatgttttggcacctccattttcaactcgatgatcaataacatcatcatcaggacgcttttaatcaaaacctttaaagggatagatctagacgagttgaatatggtggcctacggagatgatgtgctagctagttatcctttccccattgattgccttgagctagctaagactggcaaagaatatgggttgaccatgacacccgcggacaaatcaccttgcttcaatgaagtgacgtgggaaaacgccacctttttgaagagagggtttttaccagaccatcaattcccattcttgattcatcctataatgcccatgaaagagatccacgagtccatacgctggaccaaagatgcgtgcaacacccaagaccatgtgcgctctttgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagtacaattagatcagtcccagttgggaaagcattggcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-cacccgaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU578130.1_Coxsackievirus_A10_isolate_Taian1/SD/CHN/2014_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ggtcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaact-tagtagcaccattgaaactgtggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgctctcatacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgtaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----taacact--------------taaatccttcaat-acattgcactatattctgacgctgaacgcaagaaga-------tgggagctcaagtctcgacgcaaaaatccggtagtcatgagactggtaacgtagccactg-gaggttcaacaataaactttactaacatcaactattataaagattcttatgccgcctcagccacccggcaagacttcacacaagatccaaagaagttcacacaaccagtgttagattccattagagaactatcagcccctttgaactccccttctgtggaagcttgtggctatagtgatagggtcgcccagctcactgttgggaactcctccattaccacccaagaggctgctaatattgtactagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggataaaccaactcgcccggatgtgtctgtcaataggttctacactttggactccaaaatgtggcaagaaa------------------actcgactggttggtattggaagttccctgacgtgttgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtctggcttctgcttgcatgtacagtgtaatgctagtaaatttcaccagggggcccttcttgtagctgtgataccagaatttgtgattgctggcagaggatctaacacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggtaccaccggcgctacatttcatgatccatatgttttggattccggggtaccattgagtcaggctctaatatacccccatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgtaccgtttgattcagccatcaaccatagcaattttgggctaatagtgataccagttagtccgctgaagtattcatccggggcaaccactgcaatcccaatcactatcaccatagcccccctgaattcagagttcggaggactgcggcaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcctatcctcccaggattcacccccacacccacaattcatataccaggggaagtgcactccttgctggagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgttcatggttgacccaggccgcattggaccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccgggtctctgaaggttacctttatgttcacaggatccttcatggcaacaggcaagatgttagtggcctactccccgcccggaagtgctcaaccagccaacagagaaactgccatgttgggcacgcacgtcatttgggactttggactacaatcatcagtctctttggtgataccgtggatcagcaatactcacttccgcactgccaagacaggtgggaattacgattactacacggcaggtgtagtgaccttatggtatcaaaccaattatgtggtcccaccagaaactcctggagaagcatatattattgcaatgggggcggcacaagacaacttcactttgaaaatttgtaaggatactgatgaagtgacacaacaggccgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------gggaaacacagcgcgcagagctattagcagtgctacaaatgttgaat--------ccgcagccaacaccactcccagttcacatcgattagagactggacgcgtgccagcgttgcaggctgcagagacgggtgccacttctaatgccacagatgagaacatgattgaaacccgttgtgtggttaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgctccggattagtgggagtagttaacctcacagatgggggaacgg----acactactgggtatgctacatgggacatagatatcatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaatgcagaattcacatttgtcacaacgactaagaatggagaggctcgtccatacatgctacaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcagttccttttatgtcaccagctagtgcatatcagtggttttatgatggttaccccactttcggccaacacccggagacctcaaacacaacatacggattgtgtccaaacaatatgatgggcacttttgcagtaagagttgttagtagggaggcaagccaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgattaggtctcagccatacctgctcaaaaacttccccaattacgacagtag----caagatcgccaacagtgcgcgggaccgatccagtat---ca-------------------------------------------------------------------agcaagctaacatgggc--------aagtttgggcaacaatctggcgccatctacgttggtaattacagagtagtcaatagacacctggccacccacaatgactgggccaacctggtgtgggaagatagctctcgagacttgcttgtttcgtctaccactgcccagggttgcgatacaattgcccgttgtgagtgtcagacaggggtgtactactgtaactcaaggaggaaacattatccagttagcttctctaaacctagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcaatcccacttaatgctcgctgcaggccactctgaacctggggattgcgggggtatcttgaggtgtcagcatggtgtggttggcatagtgtccactggtggcgacggtcttgttggttttgctaacgtgagggacctcttatggttggatgaagaagccatggaacagggagtgtctgactacatcaag-ggactcggcgacgcttttggtactggttttactgatgcagtgtccagggaagtggaggctctgaaaaaccacttgattggttccgagggagcggtggagaagatcctgaagaacttagtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtgggtcaaagcaaagacggcgtccatcttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcaacgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaagaaaagatcattccggccgcaaaggaaaaagtcgagtttcttaataacctcaagcaactgcct-ctgatagaaaaccaaattgctaacctagagcagtctgccgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactttatgcaactgaagcgaagagagtgtacaccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattatcaggggctcaccaggaactggcaagtcactcgccacaggtataattgcgagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatacaagcaacaggtggtgacagtcatggatgatttgtgtcaaaacccagacggcaaagatatgtcattgttttgtcaaatggtatccactgtcgattttatacccccaatggcttcactggaagagaaaggtgtatccttcacatctaaatttgttattgcttcaactaatgctagcaacatcattgtccccacggtttcagactccgacgctattcgtaggagatttttcatggattgtgacatcgaagtgactgactcttacaagacagacttaggccgcttagatgcgggtagggccgcaaagctctgctcagagaacaacactgccaatttcaagaggtgtagcccgctagtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagcgtagacactgtggtatcagaattggttagggagtatagtaacaggtccgccatagggaacactatagaagctttatttcaagggcctcctaaatttaggcctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgc-agagatcaaggatggataattcctgaagcgccaaccaacgtggagcgacatctcaatagggcagtattagtgatgcaatccgttgctactgttgtcgcagtcgtatcccttgtttatgttatctacaagttatttgctggtttccaaggcgcatattctggagcgcccaagcaaactctcaagaaacctgtgttgaggacagccactgttcaagggcccagcttagattttgccctgtctctcctgcgacgtaacatcaggcaggtacaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctatcttacctcgtcactcacaaccagggaagaccatctgggttgagcacaagttgattaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatctggagcttacactagtaaccctagacaccaatgagaagtttagagatgtcaccaagttcattccagagaatatcagtggagccagtgatgccacattagtaattaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcgatacgggtttctaaatcttagtggtaagccaacccacaggaccatgatgtacaatttccctacaaaggctggacagtgtggaggtgtggtaacatctgttggtaagatcattggcatccacattggaggcaatgggcggcaagggttctgcgctggcctgaagaggagttattttgcaagcgaacaaggtgagattcaatgggtgaaacctaacaaggagaccggcagattgaatatcaatggcccaacacgcaccaagttagagcccagcgtgttccatgatgtgtttgagggcaacaaggaaccagcagtcctaacaagcaaggatcccagattagaagttgactttgagcaagccctcttctccaagtatgtgggcaatgtcctccacgaacctgatgaatatgtgaagcaggcagccctccactatgcaaaccagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccacactagcgcagggtacccatacagtgctctaggcataaagaagagggacatactagatcctaccactagggacacaacaaaaatgaagttctacatggataagtatggcttggacttaccttactccacctacgttaaggatgaacttaggtctctggacaagatcaagaaagggaagtcccgcttgatagaagctagtagcctgaatgactcagtgtacctcagaatgacttttggccatctgtatgaagcattccatgcaaatccagggactgtgactggatcggcagttgggtgcaatccggatgtgttctggagtaaactcccaattctgctcccaggctcgctatttgcctttgactattcaggctatgatgctagtctcagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgacactcatagaaggaataaatcacacccatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccatcaggatgttctggcacctccattttcaactcgatgatcaataacatcatcatcaggacgcttttaatcaaaacctttaaagggatagatttagatgagttgaatatggtggcttatggagatgatgtgctagctagttatcctttccccattgattgccttgagctggctaagactggcaaagagtatgggctgactatgacacccgcggacaaatcaccttgcttcaatgaagtgacgtgggaaaacgccacctttctgaagagggggtttctaccagaccatcaattcccattcttgattcatcctgtaatgcccatgaaagagatccgcgagtccatacgctggaccaaggatgcgtgcaatacccaagaccatgtacgctctctgtgtttattggcttggcacaatggtaaggatgagtatgaaaaatttgtgagtacaattagatcagtcccagtagggaaagcattggcaattccaaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagtta-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP009581.1_Coxsackievirus_A10_strain_FY08/AH/CHN/2013_complete_genome
---------------------------------------ttg-t-acccatctaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gtaacttagaagt------------tatgaacattact-ggtcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-tacctcacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----taacact--------------taaatccttcaat-acattgcactacattctaacgctgaacacaagaaga-------tgggagctcaagtctcgacgcaaaaatccggtagtcatgagactggcaacgtagccactg-gaggatcaacaataaactttactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccaaagaaattcacacaaccagtgttagattctattagagaactatcagcccctttgaactccccttctgtggaagcttgtggctatagtgatagagtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtactagcttatggagagtggcctgagtactgccctgacacagacgcgactgccgtggataaaccaactcgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------actcgactggttggtattggaaattccctgacgtgctgaacaagacgggggtattcggacagaatgcccagtttcattacttgtaccggtctggtttctgcctgcatgtacagtgtaatgctagtaaatttcaccagggggcccttcttgtagctgtgataccagaatttgtgattgctggcagaggatctaacacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggtaccaccggcgctacatttcatgatccatacgttttggattccggggtaccattgagccaggctctaatatacccccatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgattcagccatcaaccatagcaattttgggctaatagtgataccagttagcccgctgaagtattcgtccggggcaaccactgcaatcccaatcactatcaccatagcccccctgaattcagagttcggaggactgcgacaagccgtcagtcagggcatcccagctgagcttaggcccgggactaatcagttcctaaccacagatgatgacactgcagcacccatcctcccaggattcacccccacacccacaattcatataccaggggaagtgcactccttgctggagttgtgtagggtggagactattttggaagtgaacaa----------------caccactgaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgttcatggttgacccaggccggattggaccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccgggtctctgaaggttacctttatgttcacaggatccttcatggcaacaggcaagatgctagtggcctactccccgcccggaagtgctcaaccagccaacagagaaaccgccatgctgggcacgcacgtcatttgggactttgggctacaatcgtcagtctctttggtgataccgtggattagcaacactcacttccgcactgccaagacaggtgggaattacgattactacacggcaggtgtagtgaccttatggtatcaaaccaattacgtggtcccaccagaaactcctggagaagcatatattattgcaatgggggcggcacaagacaacttcactttgaagatttgcaaggatactgatgaagtgacgcaacaggctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------gggaaacacagcgcgcagagctattagcagtgctacaaatgttgaat--------ccgcagccaacaccactcccagttcacaccgattagagactggacgcgtgccagcgctacaggctgcagagacgggtgccacttctaatgccacagatgagaacatgattgaaacccgttgtgtggttaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgctctggattagtgggggtagttaacctcacagatggggggacgg----gcactactgggtatgccacatgggacatagatattatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaatgcagaattcacatttgtcacaacgactaagaatggagaggctcgtccatacatgttgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaaccaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcagttcctttcatgtcaccagctagtacatatcagtggttttatgatggttaccccactttcggccaacacccggagacctcaaacacaacatacggattgtgtccaaacaatatgatgggcacttttgcagtgagagttgttagtagggaggcaagccaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgatcagatctcagccatacctgcttaaaaacttccccaattacgacagtag----caagattgccaacagtgcacgggaccgatccagtat---ca-------------------------------------------------------------------agcaagctaacatgggt--------aagttcgggcaacaatctggcgccatctacgttggtaattacagagtggtcaatagacacctggccacccacaatgactgggccaacctggtgtgggaagatagctctcgagacctgcttgtttcgtctaccactgcccaaggttgcgatacaattgcccgttgtgagtgtcagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggccactctgaacctggggattgcgggggtatcttgaggtgtcagcatggtgtggttggcatagtatccactggtggcaacggtcttgtcggttttgctaacgtgagggacctcttatggttggatgaagaagccatggaacagggagtgtctgactacatcaag-ggactcggcgacgcttttggtactggttttactgacgcagtgtccagggaagtggaggctctgaagaaccacctgattggttccgagggagcggtggagaagatcctgaaaaacttagtgaaactcatatcagctctggtcatagttatcagaagtgactatgacttggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcgaagacggcgtccatcttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcaacgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaggaaaagatcattccggccgcaaaggaaaaagtcgagtttcttaataacctcaagcaactgcct-ctgatagaaaaccaaattgctaacctagaacagtctgccgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactttatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattatcaggggctcaccaggaactggcaagtcactcgccacaggtataatagcgagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagaccactttgatgggtacaagcaacaggtggtgacagtcatggatgatttgtgtcaaaacccagacggcaaagatatgtcattgttttgtcaaatggtatccactgtcgattttatacccccaatggcttcactggaagagaaaggtgtatccttcacatctaaatttgttattgcttcaactaatgctagcaacatcattgtccccacggtctcagactccgacgctattcgtaggagatttttcatggattgtgatatcgaagtgactgactcttacaagacagacttaggccgcttagatgcgggtagggccgcaaagctctgctcagagaacaacactgccaatttcaagaggtgtagcccgctagtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagcgtagacactgtggtatcagaattggttagggagtatagtaacaggtccgccataggaaacactatagaagctttatttcaagggcctcctaaatttaggcctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgc-agagatcaaggatggataattcctgaagcgccaactaacgtggagcgacatctcaacagggcagtattagtggtgcaatctgttgctactgtaatcgcagttgtatcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcaaactctcaagaaacctgtgttgaggacagccactgttcaagggcccagcttagattttgccctgtctctcctgcgacgcaacatcaggcaggtacaaactgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctatcttacctcgtcactcacaaccagggaagaccatctgggttgagcacaagttgatcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacactagtaaccctagacaccaatgagaagtttagagatgtcactaagttcattccagagaatatcagtggagccagtgatgccacattagtgatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatacgggtttctgaatcttagtggtaagccaacccacaggaccatgatgtacaatttccctacaaaggctggacagtgtggaggcgtggtaacatctgttggtaaaatcattggcatccacattggaggcaatgggcgacaagggttctgcgctggtctgaagaggagttattttgcaagtgaacaaggtgagatccaatgggtgaaacctaacaaggagaccggcagactaaatatcaatggcccaacacgcaccaagttagagcccagtgtgttccatgatgtgtttgagggcaacaaggagccagcagtcctaacaagtaaggatcccagattagaggttgactttgagcaagccctcttctccaagtatgtgggcaatgtcctccacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaaccagcttaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccacactagcgcggggtacccatacagtgctctaggcataaagaagagggacatactagatcctaccactagggacacaacaaagatgaagttctacatggataagtatggcttggacttgccttactccacctacgttaaggatgaacttaggtctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgactcagtgtacctcagaatgacttttggccatctgtatgaagcattccatgcaaatccagggactgtgactggatcagcagttggatgcaatccggatgtgttctggagtaaactcccaattctgctcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgtcacttatagaaggaataaatcatacccatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccgtcaggatgttctggcacctccattttcaactcgatgatcaacaacattatcatcaggacgcttttaatcaaaacctttaaagggatagatctagacgagttgaatatggtggcctatggagatgatgtgctagctagttatcccttccctattgattgccttgagctagctaagactggcaaagagtatgggctaactatgacacccgcggacaaatcaccttgcttcaatgaagtgacgtgggaaaatgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcctataatgcccatgaaagagatccacgagtccatacgctggactaaagatgcgtgcaatacccaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagtacaattagatcagtcccagtagggaaagcattggcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289401.1_Coxsackievirus_A10_isolate_CV-A10/P670/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctagctacttcgagaaact-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagctagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----taacact--------------taaatccttcaat-acattgcactacattctaacgctgaacacaagaaga-------tgggagctcaagtctcgacgcaaaaatccggtagtcatgagactggtaacgtagccactg-gaggatcaacaataaactttactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccaaagaagttcacacaaccagtgttagattctattagagaactatcagcccctttgaactccccttctgtggaagcttgtggctatagtgatagggtcgcccagctcactgttgggaactcctctattactacccaagaggctgctaatattgtactagcttatggagagtggcctgagtactgccctgacacagacgcaacggccgtggataaaccaactcgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------actcgactggttggtattggaaattccctgacgtgctgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtatcggtctggtttctgcttgcatgtacagtgcaatgctagtaaatttcaccagggggcccttcttgtagctgtgataccagaatttgtgattgctggcagaggatctaacacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggtaccaccggcgctacatttcatgatccatacgttttggattccggggtaccattgagtcaggctctaatatacccccaccaatggatcaatctccgcactaataactgtgcaactgttatagttccatacatcaatgctgttccgtttgattcagccattaaccatagcaattttgggctagtagtgataccagttagtccgctgaagtattcgtccggggcaaccactgcaatcccaatcactatcactatagcccccctgaattcagagttcggaggactgcggcaagccgttagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccaggattcacccccacacccacaattcatataccaggggaagtgcactccttgctggagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgttcatggttgacccaggccgtattggaccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccgggtctctgaaggttacctttatgttcacaggatccttcatggcaacaggcaagatgctagtggcctactccccgcccggaagtgctcaaccagccaacagagaaaccgccatgttaggcacgcacgtcatttgggactttggactacaatcgtcagtctctttggtgataccgtggatcagcaacactcacttccgcactgccaagacaggtgggaactacgattactacacggcaggtgtagtgaccctatggtatcaaaccaattacgtggtcccaccagaaactcctggggaagcatatattattgcaatgggggcggcacaagacaacttcactttgaagatttgcaaggatactgatgaagtgacacaacaggctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------gggaaacacagcgcgcagagctattagcagtgctacaaatgttgaat--------ccgcagctaacaccactcccagctcacaccgattagaaactggtcgcgtgccagcgctgcaggctgcagagacgggtgccacttctaatgccacagatgagaacatgattgaaacccgttgtgtggttaacaggaacggggtgttggaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacagatggggggacgg----acactactgggtatgctacatgggacatagatatcatgggctttgtccaactccgcagaaaatgtgagatgttcacatacatgaggttcaatgcagaattcacgtttgtcacaacgactgagaatggagaggctcgcccatacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctccagcacaagtctcagttcctttcatgtcaccagctagtgcgtatcagtggttctatgatggttaccccactttcggtcaacacccggagacctcaaacacaacatacggattgtgtccaaacaatatgatgggcacttttgcagtgagagttgttagtagggaggcaagccaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgattaggtctcagccatacctgctcaaaaacttccccaattacgacagtag----caagattgccaacagtgcacgggaccgatccagtat---ca-------------------------------------------------------------------agcaagctaacatgggt--------aagtttgggcaacaatctggcgccatctacgttggtaattacagagtggtcaatagacacctggccacccacaatgactgggccaatctggtatgggaagatagctctcgagacctgcttgtttcgtctaccactgcccagggttgcgatacaattgcccgttgtgaatgtcagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggccactctgaacctggggattgcgggggtatcttgaggtgtcagcatggtgtggttggcatagtatctactggtggcaacggtcttgtcggttttgctaacgtgagggacctcttgtggttggatgaagaagccatggaacagggagtgtctgactatatcaag-ggactcggcgacgcttttggtactggttttactgacgcagtgtccagggaagtggaggctctgaaaaaccacctgattggttccgagggagcggtggagaagatcctgaagaacttagtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcatgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcaacgatatggcaaatgctgcaaagggattggagtgggtctccaacaaaatcagcaagtttattgattggctcaaagaaaagatcattccggccgcaaaggaaaaagtcgagtttcttaataacctcaagcaactgtct-ctgatagaaaaccaaattgctaacctagagcagtctgccgcttcacaagaagaccttgaagtcatgtttggcaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactttatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattatcaggggctcaccaggaactggcaagtcactcgccacaggtataatagcgagagctattgctgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatacaagcagcaggtggtgacagtcatggatgatttgtgccaaaacccagacggcaaagatatgtcattgttttgtcaaatggtatccactgtcgattttatacccccaatggcttcactggaagagaaaggtgtatccttcacatctaaatttgttattgcttcaactaatgctaacaacatcattgtacccacggtctcagactccgacgctattcgcaggagattttttatggattgtgacatcgaagtgactgactcttacaagacagacttaggtcgcttagatgcgggtagggccgcaaagctctgctcagagaacaacactgccaatttcaagaggtgtagcccgctagtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagcgtagacactgtggtatcagaattggttagggagtatagcaacaggtccgccataggaaacactatagaagctttatttcaagggcctcctaaatttaggcctataagaatc---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgc-agagacaaaggatggataattcctgaagcgccaaccaacgtggagcgacatctcaatagggcagtgttagtgatgcaatccgttgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcaaactctcaagaaacctgtgttgaggacagccactgttcaagggcccagcttagattttgccctgtctctcctgcgacgcaacattaggcaggtgcaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctatcttacctcgtcactcacaaccagggaagaccatctgggttgagcacaagttgatcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacactagtaaccctagacaccaatgagaagtttagagatgtcaccaagttcattccagagaatatcagcggagccagtgatgccacattagtaatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatacgggtttctaaatcttagtggtaagccaacccacaggaccatgatgtacaatttccctacaaagtctggacagtgtggaggtgtggtaacatctgttggtaagatcattggcatccacattggaggcaatgggcggcaagggttctgcgctggtctgaagaggagttattttgcaagtgaacaaggtgagattcaatgggtgaaacctaacaaggagaccggcagattaaatatcaatggcccaacacgcaccaaattagagcccagtgtgttccatgatgtgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattagaagttgactttgagcaagcccttttctccaagtacgtgggcaatgtcctccacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaaccagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccacactagcgcggggtacccatacagcgctctgggcataaagaagagggacatactagatcctaccactagggacataacaaaaatgaagttctacatggataagtatggcttggatttaccttactccacctacgttaaagatgaacttagacctctagataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgattcagtgtacctcagaatgacttttggccatctgtatgaagcattccatgcaaatccagggactgtgactggatcggcagttgggtgcaatccggatgtgttctggagtaaactcccaattctgctcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtattacgggacattggctactcagaggaagcagtgtcactcatagaaggaataaatcacacccatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccatcaggatgttctggcacctccattttcaactcgatgatcaacaacatcatcatcaggacgcttttaatcaaaacctttaaagggatagacctagacgagctgaacatggtggcttatggagatgatgtgctagctagttatcctttccccattgattgccttgagctggctaagactggcaaagagtatgggctgactatgacacccgcggacaaatcaccttgcttcaatgaagtgacgtgggaaaacgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcctataatgcctatgaaagagatccacgagtccatacgctggaccaaagatgcgtgcaatacccaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgagtatgaaaaatttgtgagtacaattagatcagtcccagtagggaaagcattggcaattccaaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagtta-------------------------aaag---------------ctggaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289399.1_Coxsackievirus_A10_isolate_CV-A10/P638/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaact-tagtagcaccattgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagggtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcagagcgcatgccctcaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----taacact--------------taaatccttcaac-acattgcactacattctaacgctgaacacaagaaga-------tgggggctcaagtctcgacgcaaaaatccggtagtcatgaaactggtaacgtagccactg-gaggatcaacaataaattttactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccaaagaagttcacacaaccagtgttagattctattagagaactatcagcccctttgaactccccttctgtggaagcttgtggctatagtgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtactagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggataaaccaactcgcccggacgtgtctgtcaacaggttctacactttggattccaaaatgtggcaagaga------------------actcgaccggctggtattggaagttccctgacgtgctgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtctggtttctgcttgcatgtacagtgtaacgctagtaaatttcaccagggggcccttcttgtagctgtgataccagaatttgtgattgctggcagaggatctaacacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggtaccaccggcgctacattccatgatccatacgttttggattccggggtaccattgagtcaggctctaatatacccccatcaatggatcaatctccgcaccaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgattcagccatcaaccatagcaattttgggctaatagtgataccagttagcccgctgaagtattcgtccggggcaaccactgcaatcccaatcactatcactatagcccccctgaattcagagttcggaggactgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccaggattcacccccacacccacaattcatataccaggggaagtgcactccttgctggagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttgacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgttcatggttgatccaggccgtattggaccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccgggtctctgaaggttacctttatgttcacaggatccttcatggcaacaggcaagatgctagtggcctactccccgcccggaagtgctcaaccagccaacagagaaaccgccatgttgggcacgcatgtcatttgggactttggactacaatcgtcagtctctttggtgataccgtggatcaacaacactcacttccgcactgccaagacaggtgggaattacgattactacacggcaggtgtagtgaccttatggtatcaaaccaattacgtggttccaccagaaactcctggagaagcatatattattgcaatgggggcggcacaagacaacttcactttgaagatttgcaaggatactgatgaagtgacacaacaggctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------gggaaacacagcgcgcagagctattagcagtgctacaaatgttgaat--------ccgcagccaacaccactcccagttcacaccgattagagactggacgcgtgccagcgctacaggctgcagagacgggtgctacttctaatgccacagatgagaacatgattgaaacccgttgtgtggttaatagaaatggggtgttggaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacaggtggggggacgg----acaccactgggtatgccacatgggacatagacattatgggctttgttcaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgtcacaacgactgagaacggagaggctcgtccgtacatgctgcaatatatgtatgtgcctccaggtgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtgtcagttcctttcatgtctccagctagcgcatatcagtggttttatgatggttaccccactttcggccagcacccagaaacctcaaacacaacatacggattgtgcccaaacaatatgatgggcacttttgcagtgagagttgttagcaaggaagcaagccaactgaaattacagactagagtgtacatgaagcttaagcacgtaagggcctgggtcccaagaccgatcaggtcccagccatatttgcttaaaaacttccccaattacgacagtag----caagattagcaacagcgcacgggaccgatccagcat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaatttgggcaacaatctggcgccatctacgttggtaattatagagtggtcaatagacacctggccacccacaatgactgggccaacctggtgtgggaagatagttctcgagacctgcttgtttcgtctaccactgctcagggttgcgacacgattgcccgttgtgagtgtcagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcatctttgtagaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgtaggccactctgaacctggggattgcgggggtatcttgaggtgtcagcatggtgtggttggcatagtatccactggtggcaacggtcttgtcggctttgctaacgtgagggacctcttatggttggatgaagaggccatggaacagggagtgtctgactatatcaag-ggactcggcgacgcttttggtactggttttactgacgcagtgtccagggaagtggaggctctgaaaaaccacctgattggttccgagggagcggtggagaagatcctgaagaacttagtgaagctcatatcagctctggtcatagttatcagaagtgactatgatatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtatccctatggcacagaagcagagtgcatcttggcttaagaagttcaacgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaggaaaagatcattccggccgcaaaggaaaaagtcgagtttcttaataacctcaagcaactgcct-ctgatagaaaaccaaattgctaacctagagcagtctgccgcttcacaagaagaccttgaagtcatgtttggtaatgtgacatacctagctca---------cttttgccgcaagttccagccactttatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattatcaggggctcaccaggaactggcaagtcactcgccacaggtataatagcgagagccattgctgacaaatatcactctagtgtatactcccttccaccagacccagatcactttgatggatacaagcaacaggtggtgacagtcatggatgacttgtgtcaaaacccagacggcaaagatatgtcattgttttgtcaaatggtatccactgtcgattttatacccccaatggcttcactggaggagaaaggtgtatccttcacatctaaatttgttattgcttcaactaatgctagcaacatcattgtccccacggtctcagactccgacgctattcgtaggaggtttttcatggattgtgatatcgaagtgactgactcatataagacagacttaggccgcttagatgcgggtagggccgcaaagctctgctcagagaacaacactgccaatttcaagaggtgtagcccgctagtgtgtggtaaagccatccaactgagagataggaagtctaaagtcaggtatagcgtagacactgtggtatcagaactggttagggagtatagtaacaggtccgccataggaaacactatagaagctttatttcaagggcctcctaaatttagacctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgt-agagatcaaggatggataattcctgaagcgccaaccaacgtggagcgacatctcaatagggcagtattagtgatgcaatccgttgctactgtagtcgcagttgtatctcttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcaaactctcaagaaacctgtgttgaggacagccactgttcaagggcccagcttagattttgccctgtctctcctgcgacgtaatatcaggcaggtacaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctatcttacctcgtcactcacaaccaggggagaccatctgggttgagcacaagttgatcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacattagtaaccctggacaccaatgagaagtttagagatgtcaccaagttcattccagagaatatcagtggagccagtgatgccacattagtaattaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatacgggtttctaaatcttagtggtaagccaacccacaggaccatgatgtacaatttccctacaaaggctgggcagtgcggaggtgtggtaacatctgttggtaaaatcattggcatccacattggaggcaatgggcgacaagggttctgcgctggcctgaagaggagttattttgcaagtgaacaaggtgagatccaatgggtgaaacctaacaaggagaccggcagattaaacatcaatggcccaacacgcaccaagttagagcccagtgtgttccatgatgtgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattagaagttgactttgagcaagccctcttctccaagtatgtgggcaatgtcctccacgaacctgacgaatatgtgaagcaggcagccctccactacgcaaaccagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccacactagtgcaggatacccatacagtgctctgggcataaagaagagggacatactagatcctaccactagggacacaactaaaatgaagttctacatggataagtatggcttggacttaccttactccacctacgttaaagatgaactgaggtctctggataagatcaagaaagggaagtctcgcttgatagaagctagcagcctgaatgactcagtgtacctcagaatgacttttggccatctgtatgaagcattccatgcaaatccagggactgtgactggatcagcagttgggtgcaatccggatgtgttctggagtaaactcccaatcctgctcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgtcactcatagaaggaataaatcacacccatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccatcaggatgttctggcacctccattttcaactcgatgatcaacaacatcatcatcaggacgcttttaattaaaacctttaaagggatagatctagacgagttgaatatggtggcttacggagatgatgtgctagctagttatcctttccccattgattgccttgagctggctaagactggcaaagagtatgggctgactatgacacccgcggacaaatcaccttgctttaatgaggtgacgtgggaaaacgccacctttctgaagagagggttcctaccagaccatcaattcccattcttgattcatcctataatgcccatgaaagagatccacgagtccatacgctggaccaaagatgcgtgcaatacccaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgagtatgaaaaatttgtgagtacaattagatcagtcccagtagggaaagcattggcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289405.1_Coxsackievirus_A10_isolate_CV-A10/P866/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttgg-tcaagcacttctg-tacccccggactgagtatcaatagactgc-tcacgcggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaact-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---cttt---attctcataatggctgcttatggtgaccattgag-------gaattgccaccatatagctattggattggccatccgg--tgtgcaacagagctatcatc-----tacttg----tttgtt-ggatacattccat-----taacact--------------taaatccttcaat-acattgcactacattctaacgctgaacacaagaaga-------tgggagctcaagtctcgacgcaaaaatccggtagtcatgagactggtaacgtagccactg-gaggatcaacaataaactttactaatatcaactattataaagattcctacgccgcgtcagctacccggcaagacttcacacaagatccaaagaaattcacacaaccagtgttggattctattagagaactatcagcccctttgaactccccttctgtggaagcttgtggctatagtgatagggtcgcccagctcaccgttgggaactcctccattactacccaagaggctgctactattgtactagcttatggagagtggcctgagtactgccccgacacagacgcaactgccgtggataaaccaactcgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------actcgactggttggtattggaaattccctgacgtgttgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccgatctggtttctgcttgcatgcgcagtgtaatgctagtaaatttcaccaggggacccttcttgtagctgtgataccagaatttgtgattgctggcagaggatttaacacaaaaccagatg---aagcaccccacccaggggttagtaggactttccctggcaccaccggcggtacatttcatgatccatacgttttggattccggggtaccattgagtcaggctctaatataccctcatcaatggatcaatcttcgcactaacaactgtgcaactgttatagttccttacatcaatgctgttccgtttgattcagccatcatccatagcaattttgggctaatagtgataccagttagaccgctgaagtattcgtccggggcaaccaatgcaatcccaatcactatcactatagcccccctgaattcagagttcggaggattgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccaggattcacccccacgcccacaattcatataccaggggaagtgcactccttgctggagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccaggccggattggaccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccggatctctgaaggttacctttatgttcacaggatccttcatggcaacaggcaagatgctagtggcctactccccgcccggaagtgctcaaccagccaacagagaaaccgccatgctgggcacgcacgtcatttgggactttgggctacaatcgtcagtctctttggtgataccgtggattagcaacactcacttccgcactgccaagacaggtgggaattacgactactacacggcaggtgtggtaactttatggtatcaaaccaattacgtggtcccaccagaaactcctggagaagcatatattattgctatgggggcggcacaagacaactttactttgaagatttgcaaggatactgatgaagtgacgcaacaggctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------gggaaacacagcgcgcaaagctataagtagtgctacaaatgttgaat--------ccgcagccaacaccactcccagttcacaccgattagagactggacgcgtgccagcgctacaggctgcagagacgggtgccacttctaacgccacagatgagaacatgatcgaaacccgttgtgtggttaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacagatggagggacgg----acactactgggtacgctacatgggacatagatatcatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaatgcagaattcacatttgtcacaacgactgagaatggagaggctcgtccatacatgctgcaatatatgtatgtgccccctggtgcccccaaaccgactggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcagttcctttcatgtcaccagctagtgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatacgggttgtgtccaaataacatgatgggcacttttgcagtgagagttgttagtagggaggcaagccaactaaaactacaaaccagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgatcaggtctcagccatacctacttaaaaacttccccaattacgacagtag----caagatcgccaacagtgcacgggaccggtccagtat---ta-------------------------------------------------------------------agcaagctaacatgggt--------aagtttgggcaacaatctggcgctatctacgttggtaattacagagtggtcaatagacacctggccacccacaatgactgggccaacctagtgtgggaagatagctctcgagacctgcttgtttcgtctaccactgcccagggttgcgatacaattgcccgttgtgagtgtcagacaggggtgtactattgtaactcaaggaggaagcattatccagtcagcttctctaaacccagcctcgttttcgtagaggccagtgagtattaccctgctagatatcaatcccacttaatgctcgctgcaggccactctgagcctggggattgcgggggtatcttgaggtgtcagcatggtgtggttggcatagtatccactggtggcaatggtcttgtcggttttgctaacgtgagggacctcttatggttggatgaagaagccatggaacagggagtgtctgactacatcaag-ggactcggcgatgcttttggtactggttttactgacgcggtgtccagagaagtggaggctctgaaaaaccacctgattggttccgagggagcggtggagaagatcctgaagaacttagtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcaacgatatggcgaacgctgcaaaaggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaggaaaagatcattccggccgcaaaggaaaaagtcgagtttcttaataacctcaagcaactgcct-ctgatagaaaaccaaattgctaacctagagcagtctgccgcttcacaagaagaccttgaagtcatgtttggcaatgtgtcgtacctagctca---------cttttgtcgcaagttccagccactttatgcaactgaagcgaagagagtgtacgccctagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattatcaggggctcaccaggaactggcaagtcactcgccacaggtataatagcgagagccattgctgacaaataccactctagtgtgtactcccttccaccagacccagatcactttgacgggtacaagcaacaggtggtgacagtcatggatgatttgtgtcaaaacccagacggcaaagatatgtcgttgttttgtcaaatggtatccactgtcgattttatacccccaatggcttcactggaagagaaaggtgtatccttcacatctaaatttgttattgcttcaaccaatgctagtaacatcattgtccccacggtctcagactccgacgctattcgtaggagatttttcatggattgtgatatcgaagtgactgactcttacaagacagacttaggccgcttggatgcgggtagggccgcaaagctctgctcagagaacaacactgccaatttcaagaggtgtagcccgctagtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagcgtagacactgtggtatcagaattggttagggagtatagtaacaggtccgccataggaaacactatagaagctttatttcaagggcctcctaaatttaggcctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgtcgacagtgaagaggtgcggcagtactgc-agagatcaaggatggataattcctgaagcgccaaccaacgtggagcgacatctcaatagggcagtattagtgatgcaatccgttgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcaaactctcaagaaacctgtgttgaggacagccactgttcaagggcccagcttggattttgccctgtctctcctgcgacgtaacatcaggcaggtacaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgccatcttacctcgccactcacaaccagggaagaccatctgggttgagcacaagttaatcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacactagtaaccctagacaccaatgagaagtttagagatgttaccaagttcattccagagaatatcagtggagccagtgatgctacattagtaatcaacactgaacatatgccatcaatgtttgtcccggtgggagatgttgttcaatacgggtttctaaatcttagtggtaagccaacccacaggaccatgatgtacaatttccctacaaaggctggacagtgtggaggcgtggtaacatctgttggtaaaatcattggcatccacattggaggcaatgggcgacaagggttctgcgctggcttgaagaggagttattttgcaagtgaacaaggtgagattcaatgggtgaaacctaacaaggagaccggcagattcaatatcaatggtccaacacgcactaagttagagcccagtgtgttccatgatgtgtttgagggcaacaaggagccagcagttctaacaagcaaggatcccagattagaagttgattttgagcaagccctcttctccaagtatgtgggcaatgtcctccacgagcctgatgaatatgtgaaacaggcagccctccactacgcaaaccagcttaagcaactggatataaacaccaaacagatgagcatggaggaagcgtgctatggtacagagaacctggaagcaattgaccttcacactagtgcaggatacccatacagtgctctgggcataaagaagagggacatactagatcctaccactagggacacaactaaaatgaagttctacatggataagtatggcttggacttaccttactccacctacgttaaagatgaactgaggtctctggataagatcaagaaagggcagtctcgcttgatagaagctagcagcctgaatgactcagtgtacctcagaatgacttttggccatctgtatgaagcattccatgcaaatccagggactgtgactggatcggcagttgggtgcaatccggatgtgttctggagtaaactcccaatcctgctcccaggctcgttatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgtcactcatagaaggaataaatcacacccatcatgtgtatcggaacaaaacatactgtgtccttggtgggatgccgtcaggatgttctggcacctccattttcaactcgatgatcaacaacatcatcatcaggacgcttttaatcaaaacctttaaagggatagatctagacgagttgaatatggtagcctatggagatgatgtgctagctagttatcccttccccattgactgccttgagctagctaagactggcaaagagtatgggctgactatgacacccgcggacaaatcaccttacttcaatgaagtgacgtgggaaaacgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcctataatgcccatgaaggagatccacgagtccatacgttggaccaaagatgcgtgcaatacccaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgagtatgaaaaatttgtgagtacaattagatcagttccagtagggaaagcattggcaattccgaattttgagaatttgagaagaaattggcttgaactatttt--ag-atttacagtta-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-a-actg--------gtgggggtaaatttgt-ta-taaca-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU578127.1_Coxsackievirus_A10_isolate_Weihai/SD/CHN/2014_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-taaccccggactgagtatcaatagactgc-tcacgtggtcgaaagagaaaacgttcgttatccggctaactacttcgagaaact-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgtggagcgcatgcccccaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttgccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----tgacatc--------------taaatcccttaat-acattgcactatattctaacgttgaacgcaagaaaa-------tgggagctcaagtctcgacgcaaaaatccggcagtcatgagactggtaatgtagccactg-gaggatctacaataaatttcactaacatcaactattataaagattcttacgccgcatcagctacccggcaagacttcacacaagatccgaagaaattcacacaaccagtgttagactctattagagaactatcagcccctttgaactctccttctgtggaagcttgtggttatagtgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtagataaaccaactcgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------attcgactggttggtattggaagttccctgacgtgctgaacaaaacgggtgtgttcggacagaatgcccaatttcattacttgtaccggtcgggtttctgcttgcacgtacagtgtaatgctagtaagtttcaccagggggcccttcttgtggctgtgataccagaatttgtgatcgctggcagagggtctaacacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggcaccaccggtgctacattccatgatccatacgttctggattccggggtaccattgagtcaggctctaatatacccccatcagtggatcaacctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgactcagccatcaaccatagcaattttgggctaatagtgataccagttagtccgctgaagtattcgtccggggcaactactgcaatcccaatcactatcactatagcccccctgaattcagagtttggaggattgcgacaagccgtcagtcaaggcatcccagctgaactcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccaggattcacccccacacccacaattcacataccaggggaagtacactctttgctagagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccaggccgaattggaccttggcaatctactttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatcctttatggcaacaggcaagatgctggtggcctactccccgcccggaagcgctcaaccagccaacagagaaaccgccatgctgggcacgcacgtcatctgggactttgggctacaatcgtcagtctctttggtgataccgtggatcagtaacactcacttccgtactgccaagacaggtgggaattacgattactatacggcgggtgtagtgaccttatggtaccaaaccaattacgtggtcccgccagaaacccctggagaggcatatattattgcaatgggggcggcacaagacaacttcactttgaagatctgcaaggatactgatgaagtgacacaacaagctgtgttgcaaggtgaccct--------gtggaggatataatac---atgacgctct--------------------------gggaaacacagcgcgcagagctattagcagtgttacaaatgttgaat--------ccgcggccaacaccactcccagttcacaccgactagagactggacgcgtaccagcgctacaggctgcagagacgggtgccacttctaatgccacagatgagaacatgattgagacccgctgtgtggttaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgctctggattagtgggagtggtcaacctcacagatggggggacgg----acaccactgggtatgctacatgggacatagacattatgggttttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaatgcagaattcacatttgtcacaacgacaaagaatggagaggctcgtccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcagttcctttcatgtcaccagctagcgcatatcagtggttctatgatggttaccccactttcggccagcacccggagacctcaaacacaacatacggattgtgcccaaacaatatgatgggcacttttgcagtgagagttgttagtagagaggcaagtcaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgatcaggtctcagccatacctgcttaaaaacttccctaattacgacagtag----caaagtcaccaacagtgcacgggaccgttctagtat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaatttgggcaacaatctggcgccatctacgttggtaactacagagtggtcaataggcacctggccacccacaatgactgggccaacctggtgtgggaagacagttctcgagacctgcttgtttcgtctaccaccgcccagggttgcgatacgattgcccgttgtgagtgtcagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcaatctcacctaatgctcgctgcaggccactctgaacctggggattgcgggggtatattgaggtgtcagcatggtgtggttggcatagtatccactggaggcaacggtcttgtcggttttgctaacgtgagggacctcttatggttggatgaagaagccatggaacagggagtatctgactatatcaag-ggactcggcgacgcctttggtactggctttactgacgcagtgtctagggaagtggaggccctgaaaaattacctgattggttccgagggagcggtggagaagatcctgaagaatttggtaaagctcatatcagctctggtcatagttatcagaagtgactacgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaggaaaagatcattccggccgcaaaggaaaaagtcgagtttcttaataacctcaagcaactgccc-ttgatggaaaatcaaattgctaacttagaacagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattatcaggggctcaccaggaactggcaagtcacttgccacaggtataatagcaagagccattgctgacaaatatcactctagtgtgtactcccttccaccagatccagatcattttgatggatacaagcaacaagtggtgacagtcatggatgatctgtgtcaaaacccagatggcaaagatatgtcattgttttgtcaaatggtatccactgtcgattttatacccccaatggcttcactggaagagaaaggtgtatccttcacatctaaatttgttattgcttcaactaatgccagcaacatcattgtccccacggtctcagactctgacgctatccgtaggagatttttcatggattgtgatatcgaagtgactgactcttataagacagacttaggtcgcttagatgcaggtagggccgcaaagctctgctcagagaataacactgccaatttcaagaggtgcagcccgctagtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagcgtagacactgtggtatcagaattagttagggagtatagtaacaggtctgccatagggaacactatagaagctttattccaagggcctcctaaatttaggcctgtaagaatt---agtcttgacgagaaacccgctccagatgccattagtgacctgcttgctagtgttgatagtgaagaggtgcggcagtactgc-agagatcaaggatggataatacctgaaacgccaaccaacgtggagcggcatctcaatagggcagtattagtgatgcaatccatcgctactgtagtcgcagttgtgtcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcacccaggcaagctctcaagaaacctgtgttgaggacagccactgttcaagggcccagcttagattttgccctgtccctcctacgacgtaacgtcaggcaggtgcaaaccgaccaagggcacttcacaatgcttggggtacgtggccaccttgctatcttacctcgtcactcgcaaccagggaagaccatctgggttgagcacaagttggtcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaacttggagctcacactagtaaccctagataccaatgagaagtttagagatgtcaccaagttcattccagagaatatcagtggagccagtgatgccacattaataatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatatgggttcctaaatcttagtggtaaaccaacccacaggaccatgatgtacaatttccctacaaaggctggacagtgtggaggcgtggtaacatctgtcggtaaaatcattggcatccacattggaggcaacgggcgtcaggggttttgcgctggcctgaagaggagttactttgcaagtgagcaaggtgaaatccaatgggtgaaacctaacaaagagaccggcagattaaatatcaatggtccaacacgcaccaagttagagcccagtgtgttccatgatctgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattagaggttgactttgagcaagctctcttctccaagtatgtgggtaatgtcctccacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaatcagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccacactagcgcggggtacccatacagtgctttgggcataaagaagagggacatactagatcctaccactagggacacaacaaaaatgaagttctacatggataagtatggcttggatttaccttactccacctacgttaaagatgaacttaggcctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgattcagtgtatctcagaatgacttttggccacctgtatgaagcattccatgcaaacccagggactgtgaccggatcagcagttgggtgcaatccggatgtgttctggagtaaactcccaatcctgctcccaggctcgctattcgcctttgactattcaggctatgatgctagtcttggccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgtcactcatagaaggaataaatcatacccatcatgtgtatcggaacaaaacatattgtgttcttggcgggatgccgtcaggatgttctggtacttccattttcaactcgatgatcaacaacatcatcattaggacgcttttaatcaaaacttttaaagggatagatctggacgagttgaatatggtggcctatggagatgatgtgctagctagttatcctttccctattgactgtcttgagctagctaagactggcaaagagtatgggctaaccatgacacctgcggacaaatcaccttgcttcaatgaagtgacgtgggaaaatgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcccacaatgcccatgaaagaaattcacgaatctatacgctggaccaaagatgcgtgcaatacccaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaattagatcagtcccagttgggagagcattggcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289407.1_Coxsackievirus_A10_isolate_CV-A10/P911/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-taaccccggactgagtatcaatagactgc-tcacgtggtcgaaagagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgcccccaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----tgacacc--------------taaatccttcaat-acattgcactatattctaacgttgaacgcaagaaaa-------tgggagctcaagtctcgacgcaaaaatccggcagtcatgagactggtaatgtagccactg-gaggatctacaataaacttcactaacatcaactattataaagattcttacgctgcgtcagctacccggcaagacttcacacaagatccgaagaaattcacacaaccagtgttagactctattagagaactatcagcccctttgaactctccttctgtggaagcttgtggttatagtgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggataaaccaactcgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------attcgactggttggtattggaagttccctgacgtgctgaacaaaacgggtgtgttcggacagaatgcccaatttcattacttgtaccggtcgggtttctgcttgcatgtacagtgtaatgctagtaagtttcaccagggggcccttcttgtggctgtgataccagaatttgtgatcgctggcagagggtctaacacaaaaccaaatg---aagcgccccacccagggttcaccacaactttccctggcaccaccggtgctacattccatgatccatacgttctggattccggggtaccattgagtcaggctctaatatacccccatcagtggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgattgactcagccatcaaccatagcaattttgggctaatagtgataccagttagtccgctgaagtattcgtccggggcaactactgcaatcccaatcactatcactatagcccccctgaattcagagtttggaggattgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccagggttcacccccacacccacaattcacataccaggggaagtacactctttgctagagctgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccaggccgaattggaccttggcaatctactttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgaccttcatgttcacaggatcctttatggcaacaggcaagatgctggtggcctactccccgcccggaagcgctcaaccagccaacagagaaaccgccatgctgggcacgcacgtcatctgggactttgggctacaatcgtcagtctctttggtgataccgtggatcagtaacactcacttccgtactgccaagacaggtgggaattacgattactatacggcgggtgtagtgaccttatggtatcaaaccaattacgtggtcccgccagaaacccctggagaggcatatattattgcaatgggggcggcacaagacaacttcactttgaagatctgcaaggatactgatgaagtgacacaacaagctgtgttgcaaggtgaccct--------gtggaggatataattc---atgacgctct--------------------------gggaaacacagcgcgcagagctattagcagtgttacaaatgttgaat--------ccgcggccaacaccactcccagttcacaccgactagagactggacgcgtaccagcgctacaggctgcagagacgggtgccacttctaatgccacagatgagaacatgatagagacccgttgtgtggttaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgctctggattagtgggagtggttaacctcacagatggggggacgg----acaccactgggtatgctacatgggacatagacattatgggttttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgtcacaacgacagagaatggagaggctcgtccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcggttccttttatgtcaccagctagcgcatatcagtggttctatgatggttaccctactttcggccagcacccggagacctcaaacacaacatacggattgtgcccaaacaatatgatgggcacttttgcagtaagagttgttagtagagaggcaagtcaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaaggccgatcaggtctcagccatacctgcttaaaaacttccccaattacgacagtag----caaggttaccaacagtgcacgggaccgttccagtat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaatttgggcaacaatctggcgccatctacgttggtaactacagagtggtcaataggcacctggccacccacaatgactgggccaacctggtgtgggaagacagttctcgagacctgcttgtttcgtctaccaccgcccagggttgcgatacgattgcccgttgtgagtgtcagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagctcctctaaacctagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcaatctcacctaatgctcgctgcaggccactctgaacctggggattgcgggggtatattgaggtgtcagcatggtgtggttggcatagtatccactggaggcaacggtcttgtcggttttgctaacgtgagggacctcttatggttggatgaagaagccatggaacagggagtatctgactatatcaag-ggactcggcgacgcctttggtactggctttactgacgcagtgtctagggaagtggaggccctgaaaaattacctgattggttccgagggagcggtggagaaaatcctgaagaacttggtgaaactcatatcagctctggtcatagttatcagaagtgactacgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaggaaaagatcattccagccgcaaaggaaaaagtcgagtttcttaataacctcaagcaactgccc-ttgatggaaaaccaaattgctaacttagaacagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctacgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattatcaggggctcaccaggaactggcaagtcacttgccacaggtataatagcaagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatacaagcaacaagtggtgacggtcatggatgatttgtgtcaaaacccagatggcaaagatatgtcattgttttgtcaaatggtatccactgtcgattttatacccccaatggcttcactggaagagaaaggtgtatccttcacatctaaatttgttattgcttcaactaatgctagcaacatcattgtccccacggtctcagactccgacgctatccgtaggagatttttcatggattgtgatatcgaagtgactgactcttataagacagacttaggccgcttagatgcaggtagggccgcaaagctctgctcagagaataacactgccaatttcaagaggtgcagcccgctagtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagcgtagacactgtggtatcagaattagttagggagtatagtaacaggtctgctatagggaacactatagaagctttattccaagggcctcctaaattcaggtctgtaagaatt---agtcttgatgagaaacccgctccagatgccattagtgacctgcttgctagtgttgatagtgaagaggtgcggcagtactgc-agagatcaaggatggataatacctgaaacgccaaccaacgtggagcggcatctcaatagggcagtattagtgatgcaatccatcgctactgtagtcgcagttgtgtcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcaagctctcaagaaacctgtgttgaggacagccactgttcaagggcccagcttagattttgccctgtccctcctacgacgtaacgtcaggcaggtgcaaaccgaccaagggcactttaccatgcttggggtacgtggccaccttgctatcttacctcgtcactcgcaaccagggaagaccatctgggttgagcacaagttggtcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagctcacactagtaaccctagataccaatgagaagtttagagatgtcaccaagttcattccagagaatatcagtggagccagtgatgccacattaataatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatatgggttcctaaatcttagtggtaaaccaacccacaggaccatgatgtacaatttccctacaaaggctggacagtgtggaggcgtggtaacatctgtcggtaaaatcattggcatccacattggaggcaacgggcgtcaagggttttgcgctggcctgaagaggagttactttgcaagtgagcaaggtgaaatccaatgggtgaaacctaacaaggagaccggcagattaaatatcaatggtccaacacgcaccaagttagagcccagtgtgttccatgatctgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattagaggttgactttgagcaagctctcttctccaagtatgtgggtaatgtcctccacgaacctgatgaatatgtgaggcaggcagccctccactatgcaaatcagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccacactagcgcggggtacccatacagtgctttgggcataaagaagagggacatactagatcctaccactagggacataacaaaaatgaagtcctacatggataagtatggcttggatttaccttactccacctacgttaaagatgaacttaggcctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgattcagtgtacctcagaatgacttttggccacctgtatgaagcattccatgcaaacccagggactgtgaccggatcagcagttgggtgcaatccggatgtgttctggagtaaactcccaatcctactcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgtcactcatagaaggaataaatcatacccatcatgtgtatcggaacaaaacatattgtgttcttggcgggatgccgtcaggatgttctggtacttccattttcaactcgatgatcaacaacatcatcatcaggacgcttttaatcagaacctttaaagggatagatctggacgagttgaatatggtggcctatggagatgatgtgctagctagttatcctttccctattgattgtcttgagctagctaagactggcaaagagtatgggctgaccatgacacctgcggacaaatcaccttgcttcaatgaagtgacgtgggaaaatgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcccacaatgcccatgaaagaaattcacgaatctatacgctggaccaaagatgcgtgcaatacccaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaattagatcagtcccagttgggagagcattggcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaaa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU578131.1_Coxsackievirus_A10_isolate_Taian2/SD/CHN/2014_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-taaccccggactgagtatcaatagactgc-tcacgtggtcgaaagagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaagctgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgcccccaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----tgacacc--------------taaatccttcaat-acattgtactatattttaacgttgaacgcaagaaaa-------tgggagctcaagtctcgacgcaaaaatccggcagtcatgagactggtaatgtagccactg-gaggatctacaataaacttcactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccgaagaaattcacacaaccagtgttagactctattagagaactatcagcccctttgaactctccttctgtggaagcttgtggttatagtgatagggtcgcccagctcactgttgggaactcctccatcactacccaagaggctgcaaatattgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggataaaccaactcgtccggacgtgtctgtcaacaggttctacactctggactccaaaatgtggcaagaaa------------------attcgactggttggtattggaagttccctgacgtgctgaataaaacgggtgtgttcggacagaacgcccaatttcattacttgtaccggtcgggtttctgcttgcatgtacagtgcaatgctagtaagtttcaccaaggggcccttcttgtggctgtgataccagaatttgtgatcgctggcagagggtctaacacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggcaccaccggtgctacattccatgatccatacgttctggattccggggtaccattgagtcaggctctaatatacccccatcagtggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgactcagccatcaaccatagtaattttgggctaatagtgataccagttagtccgctgaagtattcgtccggggcaactactgcaatcccaatcactatcactatagcccccctgaattcagagtttggaggattgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccacgattcacccccacacccacaattcacataccaggggaagtacactctttgctagagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccgggccgaattggaccttggcaatctactttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacagggtcctttatggcaacaggcaagatgctggtggcctactccccgcccggaagcgctcaaccagccaacagagaaaccgccatgctgggcacgcacgtcatctgggactttgggttacaatcgtcagtctctttggtgataccgtggatcagtaacactcacttccgtactgccaagacaggtgggaattacgattactatacggcgggtgtagtgaccttatggtatcaaaccaattacgtggtcccgccagaaacccctggagaggcatatattattgcaatgggggcggcacaagacaacttcactttgaagatctgcaaggatactgatgaagtgacacaacaagctgtgttgcaaggtgaccct--------gtggaggatataattc---atgacgctct--------------------------gggaaacacagcgcgcagagctattagcagtgttacaaatgttgaat--------ccgcggccaacaccactcccagttcacaccgactagagactggacgcgtaccagcgctacaggctgcagagacgggtgccacttctaatgccacagatgagaacatgattgagacccgttgtgtggttaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgctctggattagtgggagtggttaacctcacagatggagggacgg----gcaccactgggtatgctacatgggacatagacattatgggttttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgtcacaacgacaaagaatggagaggctcgtccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcagttcctttcatgtcaccagctagcgcatatcagtggttctatgatggttaccccactttcggccagcacccggagacctcaaacacaacatacggattgtgcccaaacaatatgatgggcacttttgcagtgagagttgttagtagagaggcaagtcaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgatcaggtctcagccatacctgcttaaaaacttccccaattacgacagtag----caaggttaccaacagtgcacgggaccgttccagtat---ta-------------------------------------------------------------------agcaagctaatatgggt--------aaatttgggcaacaatctggcgccatctacgttggtaactacagagtggtcaataggcacctggccacccacaatgactgggccaacctggtgtgggaagacagttctcgagacctgcttgtttcgtctaccaccgcccagggttgcgatacgattgcccgttgtgagtgtcagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcaatctcacctaatgctcgctgcaggccactctgaacctggggattgcgggggtatattgaggtgtcagcatggtgtggttggcatagtatccactggaggcaacggtcttgtcggttttgctaacgtgagggacctcttatggttggatgaggaagccatggaacagggagtatctgactatatcaag-ggactcggcgacgcctttggtactggttttactgacgcagtgtctagggaagtggaggccctgaaaaattacctgattggttccgagggagcggtggagaagatcctgaagaacttggtgaaactcatatcagctctggtcatagttatcagaagtgactacgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgctgcaaagggattggagtggatctccaacaagatcagcaaatttattgattggctcaaggaaaagatcattccagccgcaaaggaaaaagtcgagtttcttaataacctcaagcaactgccc-ttgatggaaaaccaaattgctaacttagaacagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctatgcaattgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattatcaggggctcaccaggaactggcaagtcacttgccacaggtataatagcaagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatacaagcaacaagtggtgacagtcatggatgatttgtgtcaaaacccagatggcaaagatatgtcattgttttgtcaaatggtatccactgtcgat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>KU578132.1_Coxsackievirus_A10_isolate_Taian3/SD/CHN/2014_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gatcag-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-taaccccggactgagtatcgatagactgc-tcacgtggtcgaaagagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgcccccaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttgccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----tgacacc--------------taaatccttcaat-acactgcactatattctaacgttgaacgcaagaaaa-------tgggagctcaaatctcgacgcaaaaatccggcagtcatgagactggtaatgtagccactg-gaggatctacaataaacttcactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccgaagaaattcacacaaccagtgttagactctattagagaactatcagcccctttgaactctccttctgtggaagcttgtggttatagtgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggataaaccaactcgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------attcgactggttggtattggaagttccctgacgtgctgaacaaaacgggtgtgttcggacagaatgcccaatttcattacttgtaccggtcgggcttctgcttgcatgtacagtgtaatgctagtaagtttcaccagggggcccttcttgtggctgtgataccagaatttgtgatcgctggcagagggtctaacacaaaaccaaata---aagcgccccacccaggatttaccacaactttccctggtaccaccggtgccacattccatgatccatacgttctggattccggggtaccattgagtcaggctctaatatacccccatcagtggatcaatctccgcactaacaactgtgcaacagttatagttccatacatcaatgctgttccgtttgactcagccatcaaccatagcaattttgggctaatagtgataccagttagtccgctgaagtattcgtccggggcaactactgcaatcccaattactatcactatagcccccctgaattcagagtttggaggattgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccaggattcacccccacacccacaattcacataccaggggaagtacactctttgctagagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacaggg------ttaacaaggctcttaataccagtgtcctcgcagaaca------gagccgatgagttgtgtgctgcgtttatggttgatccaggccgaattggaccttggcaatctactttagttggacagatttgccggtattacacacaatggtccgggtctttgaaagtgacctttatgttcacaggatcctttatggcaacaggcaagatgctggtggcctactccccgcccggaagcgctcaaccagccaacagagaaaccgccatgctgggcacgcacgtcatctgggactttgggctacaatcgtcagtctctttggtgataccgtggatcagtaacactcatttccgtactgccaagacaggtgggaattacgattactatacggcgggtgtagtgaccttgtggtatcaaaccaattacgtggtcccgccagaaacccctggagaggcatatattattgcaatgggggcggcacaagacaacttcactttgaagatctgtaaggatactgatgaagtgacacaacaagctgtgttacaaggtgaccct--------gtggaggatataattc---atgacgctct--------------------------gggaaacacagcgcgcagagctattagcagtgttacaaatgttgaat--------ccgcggccaacaccactcccagttcacaccgactagagactggacgcgtaccagcgctacaggctgcagagacgggtgccacttctaatgccacagatgaaaacatgattgagacccgttgtgtggttaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgctctggattagtgggagtggttaacctcacagatggggggacgg----acaccactgggtatgctacatgggacatagacattatgggttttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgtcacaacgacagagaatggagaggctcgcccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcttttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcagttcctttcatgtcaccagctagcgcatatcagtggttctatgatggttaccccactttcggccagcacccggagacctcaaacacaacatacggattgtgcccaaacaatacgatgggcacttttgcagtgagagttgttagtagagaggcaagtcaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgatcaggtctcagccatacctgcttaaaaacttccccaattacgacagtag----caaggttaccaacagtgcacgggaccgttccagtat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaatttgggcaacaatctggcgccatctacgttggtaactacagagtggtcaataggcacctggccacccacaatgactgggccaacctggtgtgggaagacagttctcgagacctgcttgtttcgtctactaccgcccagggttgcgatacgattgcccgttgtgagtgtcagacgggggtgtattattgtaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgtctttgtagaggccagtgagtattaccctgctagatatcaatctcacctaatgctcgctgcaggccactctgaacctggagattgcgggggtatattgaggtgtcagcatggtgtggttggcatagtatccactggaggcaacggtcttgttggttttgctaacgtgagggacctcttatggttggatgaagaagccatggaacagggagtatctgactatatcaag-ggactcggcgacgcctttggtactggctttactgacgcagtgtctagggaagtggaggccctgaaaaattacctaattggttccgagggagcggtggagaagatcctgaagaacttggtgaaactcatatcagctctggtcatagttatcagaagcgactacgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgctgcgaagggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaggaaaagatcattccagccgcaaaggaaaaagtcgagtttcttaataacctcaagcaactgccc-ttgatggaaaaccaaattgctaacttagaacagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgccgcaagttccagccactctatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattatcaggggctcaccaggaactggcaagtcacttgccacaggtataatagcaagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatacaagcaacaagtggtgacagttatggatgatttgtgtcagaacccagatggcaaagatatgtcattgttttgtcaaatggtatccaccgtcgattttatacccccaatggcttcactggaagagaaaggtgtatccttcacatctaaatttgttattgcttcaactaatgctagcaacatcattgtccccacggtctcagactctgacgctatccgtaggagatttttcatggattgtgatatcgaagtgactgactcttataagacagacttaggccgcttagatgcaggtagggccgcaaagctctgctcagagaataacactgccaatttcaagaggtgcagcccgctagtgtgcggtaaagccatccaactgagagataggaagtctaaagtcaggtatagcgtagacactgtggtatcagagttagttagggagtatagtaacaggtctgctatagggaacactatagaagctttattccaagggcctccaaaattcaggcctgtaagaatt---agtcttgatgagaagcccgctccagatgccattagtgacctgcttgctagtgttgatagtgaagaggtgcggcagtactgc-agagatcaaggatggataatacctgaaacgccaaccaacgtggagcggcatcttaatagggcagtattagtgatgcaatccatcgctactgtagtcgctgttgtgtcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatactctggagcgcccaagcaagctctcaagaaacctgtgttgaggacagccactgttcaagggcccagcttagattttgccctgtccctcctacgacgtaacattaggcaggtgcaaaccgaccaagggcactttaccatgcttggggtacgtggccaccttgctattttacctcgtcactcgcaaccagggaagaccatctgggttgagcacaagttggtcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagctcacactagtaaccctagataccaatgagaagtttagagatgtcaccaagttcattccagagaatatcagtggagccagtgatgccacattaataatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatatgggttcctaaatcttagtggtaaaccaacccacaggaccatgatgtacaatttccctacaaaggccggacagtgtggaggcgtggtaacatctgtcggtaaaatcattggcatccacattggaggcaacgggcgtcaagggttttgcgctggcctgaagaggggttactttgcaagtgagcaaggtgaaatccaatgggtgaaacctaacaaggagaccggcagattaaatatcaatggtccaacacgcaccaagttagagcccagtgtgttccatgatctgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattagaggttgactttgagcaagctctcttctccaagtatgtgggtaatgtcctccacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaatcagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctacggcacagagaacctggaagcaattgacctccacactagcgcggggtacccatacagtgctttgggcataaagaagagggacatactagatcctaccactagggacataacaaaaatgaagttctacatggataagtatggcttggacttaccttactccacctacgttaaagatgaacttaggcctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgattcagtgtacctcagaatgacttttggccacctgtatgaagcattccatgcaaacccagggactgtgaccggatcagcagttgggtgcaatccggatgtgttctggagtaaactcccaatcctactcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgtcactcatagaaggaataaatcatacccatcatgtgtatcggaacaaaacatattgtgttcttggcgggatgccgtcgggatgttctggtacttccattttcaactcgatgatcaacaacatcatcatcaggacgcttttaatcaaaacctttaaagggatagatctggacgagttgaatatggtggcctatggagatgatgtgctagctagttatcctttccctattgattgtcttgaactagctaagactggcaaagagtatgggctgaccatgacacctgcggacaaatcaccttgcttcaatgaagtgacgtgggaaaatgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcccacaatgcccatgaaagaaattcacgaatctatacgctggaccaaagatgcgtgcaatacccaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatacgaaaaatttgtgagcacaattagatcagtcccagttgggaaagcattggcaattccgaattttgagaatttgaggagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU578135.1_Coxsackievirus_A10_isolate_Qingdao1/SD/CHN/2014_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-taaccccggaccgagtatcaatagactgc-tcacgtggtcgaaagagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgcccccaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----tgacacc--------------taaatccttcaat-acattgcactatattctaacgttgaacgcaagaaaa-------tgggagctcaagtctcgacgcaaaaatccggcagtcatgagactggtaatgtagccactg-gaggatctacaataaacttcactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccgaagaaattcacacaaccagtgttagactctattagagaactatcagcccctttgaactctccttctgtggaagcttgtggttatagtgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgccaatatcgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggataaaccaactcgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------attcgactggttggtattggaagttccctgacgtgctgaacaaaacgggtgtgttcggacagaatgcccaatttcattacttgtaccggtcgggtttctgcttgcatgtacagtgtaatgctagtaagtttcaccagggggcccttcttgtggctgtgataccagaatttgtgatcgctggcagagggtctaacacaaaaccaaatg---aagcg-cccacccagggtt-accacaactttccct-gcaccaccggtgctacattccatgacccatacgttctggattccggggtgccattgagtcaggctctaatatacccccatcagtggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgactcagccatcaaccatagcaattttgggctaatagtgataccagttagcccgctgaagtattcgtccggggcaactactgcaatcccaatcactatcactatagcccccctgaattcagagtttggaggattgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcccatcctccacggattcacccccacacccacaattcacataccaggggaagtacactctttgctagagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacaggg------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccaggccgaattggaccttggcaatctactttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatcctttatggcaacaggcaagatgctggtggcctactccccgcccggaagcgctcaaccagccaacagagaaaccgccatgctgggcacgcacgtcatctgggactttgggctacaatcgtcagtctctttggtgataccgtggatcagtaacactcacttccgtactgccaagacaggtgggaattacgattactatacggcgggtgtagtgaccttatggtatcaaaccaattacgtggtcccgccagaaacccctggagaggcatatattattgcaatgggggcggcacaagacaacttcactttgaagatctgcaaggatactgatgaagtgacacaacaagctgtgttgcaaggtgaccct--------gtggaggatataattc---atgacgctct--------------------------gggaaacacagcgcgtagagctattagcagtgttacaaatgttgaat--------ccgcggccaacaccactcccagttcacaccgactagagactggacgcgtaccagcgctacaggctgcagagacgggtgccacttctaatgccacagatgagaacatgattgagacccgttgtgtggttaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgctctggattagtgggagtggttaacctcacagatggggggacgg----acaccactgggtatgctacatgggacatagacattatgggttttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgtcacaacgacaaagaatggagaggctcgtccgtacatgctacaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcagttcctttcatgtcaccagctagcgcatatcagtggttctatgatggttaccccactttcggccagcacccggagacctcaaacacaacatacggattgtgcccaaacaatatgatgggcacatttgcagtgagagttgttagtagagaggcaagtcaattaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgatcaggtctcagccatacctgctcaaaaacttccccaattacgacagtag----caaggttaccaacagtgcacgggaccgttccagtat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaatttgggcaacaatctggcgccatctacgttggtaactacagagtggtcaataggcacctggccacccacaatgactgggccaacctggtgtgggaagacagttctcgagacctgcttgtttcgtctaccaccgcccagggttgcgatacgattgcccgttgtgagtgtcagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgtcttcgtagaggccagcgagtattaccctgctagatatcaatctcacctaatgctcgctgcaggccactctgaacctggggattgcgggggtatattgaggtgtcagcatggtgtggttggcatagtgtccactggaggcaacggtcttgtcggttttgctaacgtgagggacctcttatggttggatgaagaagccatggaacagggagtatctgactatatcaag-ggactcggcgacgcctttggtactggctttactgacgcagtgtctagggaagtggaggccctgaaaaattacctgattggttccgagggagcggtggagaagatcctgaagaacttggtgaaactcatatcagctctggtcatagttatcagaagtgattacgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcagtgatatggcgaacgctgcaaagggattagagtggatctccaacaaaatcagcaaatttattgattggctcaaggaaaagatcattccagccgcaaaggaaaaagtcgagtttcttaataacctcaagcaactgccc-ttgatggaaaaccaaattgctaacttagaacagtccgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagcaca---------cttttgtcgcaagttccagccactctatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgattatcaggggctcaccaggaactggcaagtcacttgccacaggtataatagcaagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatacaagcaacaagtggtgacagtcatggatgatttgtgccaaaacccagatggcaaagatatgtcattgttttgtcaaatggtatccactgtcgattttatacccccaatggcttcactggaagaaaaaggtgtatccttcacatctaaatttgttattgcttcaactaatgctagcaacatcattgtccccacggtctcagactctgacgctatccgtaggagatttttcatggattgtgatatcgaagtgactgactcttataagacagacttaggccgcttagatgcaggtagggccgcaaagctctgctcagagaataacactgccaatttcaagaggtgcagcccgctagtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagcgtagacactgtggtatcagaattagttagggagtatagcaacaggtctgctatagggaacactatagaagctttattccaagggcctcctaaattcaggcctgtaagaatt---agtcttgacgagaaacccgctccagatgccattagtgacctgcttgctagtgttgatagtgaagaggtgcggcagtactgc-agagatcaaggatggataatacccgagacgccaaccaacgtggagcggcatctcaatagggcagtactagtgatgcaatccatcgctactgtagtcgcagttgtgtcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaggcaagctctcaagaaacctgtgttgaggacagccactgttcaagggcccagcttagattttgccctgtccctcctacgacgtaacgtcaggcaggtgcaaaccgaccaagggcactttaccatgcttggggtacgtgaccaccttgctatcttacctcgtcactcgcaaccagggaagaccatctgggttgaacacaagttggtcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagctcacactagtaaccctagataccaatgagaagtttagagatgtcaccaagttcattccagagaatatcagtggagtcagtgatgccacattaataatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatatgggttcctaaatcttagtggtaaaccaacccacaggaccatgatgtacaatttccctacaaaggctggacagtgtggaggcgtggtaacatctgtcggtaaaatcattggcatccacattggaggcaacgggcgtcaagggttttgcgctggcctgaagaggagttactttgcaagtgagcaaggtgaaatccaatgggtgaaacctaacaaggagaccggcagattaaatatcaatggtccaacacgcaccaagttagagcccagtgtgttccatgatctgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattagaggttgattttgagcaggctctcttctccaagtatgtgggtaatgtcctccacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaatcagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccacactagcgcggggtacccatacagtgctttgggcataaagaagagggacatactagatcctaccactagggacataacaaaaatgaagttttacatggataagtatggcttggatttaccttactccacctacgttaaagatgaacttaggcctctggacaagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgattcagtgtacctcagaatgacttttggccacctgtatgaagcattccatgcaaacccagggactgtgaccggatcagcagttgggtgcaatccggatgtgttctggagtaaactcccaatcctactcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacatcggctactcagaggaagcagtgtcactcatagaaggaataaatcacacccatcatgtgtatcggaacaaaacatattgtgttcttggcgggatgccgtcaggatgttctggtacttccattttcaactcgatgatcaacaacatcatcattaggacgcttttaatcaaaacctttaaagggatagatctggacgagttgaatatggtggcctatggagatgatgtgctggctagttatcctttccctattgattgtcttgagttagctaagactggcaaggagtatgggctgaccatgacacctgcggacaaatcaccttgcttcaatgaagtgacgtgggaaaatgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcccacaatgcccatgaaagaaattcacgaatctatacgctggactaaagatgcgtgcaatacccaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaattagatcagtcccagttgggagagcattggcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctggaccc-caccagaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU578128.1_Coxsackievirus_A10_isolate_Linyi/SD/CHN/2014_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gatcaa-tagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtaacaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgcccccaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----taacacc--------------caaatccttcaat-acattgcattacattctaacgctgaacgcaagaaaa-------tgggagctcaagtctcgacacaaaagtccggtagtcatgagactggcaacgtagccactg-gaggatctacaataaacttcactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccaaagaaattcacacaaccggtgttagattctattaaagaactatcagcccccttgaactccccttctgtggaagcttgtggctatagtgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtagataaaccaactcgcccggacgtgtccgtcaacaggttctacactttggactccaaaatgtggcaagaga------------------actcgactggttggtattggaagttccctgacgtgctgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcaggtttctgcttacatgtacagtgtaatgctagtaaatttcaccagggggcccttcttgtggccgtgataccagaatttgtgatcgccggcaggggatctaacacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggcaccaccggtgctacatttcacgatccatacgttctggattccggggtaccactgagtcaggctctaatatacccccatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgactcagccatcaaccatagcaattttgggctaatagtgataccagttagtccgctgaaatattcgtccggggcaaccactgcaatcccaatcactatcactatagcccccctgaattcagagttcggaggattgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccaggattcacccccacacccacaattcatataccaggggaagtacactctttgctggagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcctaataccagtgtcctcgcagaata------aagccgatgagttgtgtgctgcgtttatggttgatccaggtcggattggaccttggcaatctaccttagttggacaggtttgccggtattacacacaatggtccgggtctttgaaggtgaccttcatgttcacgggatccttcatggcaacaggcaagatgctggtggcctactccccgcccggaagcgctcaaccagccaacagagaaaccgccatgctgggcacgcacgttatttgggactttggactacaatcgtcagtctctttggtgataccgtggatcagcaacactcacttccgcactgcaaagacaggtgggaattacgattactacacggcgggtgtagtgaccttatggtaccaaaccaattacgtggtcccgccagaaacccctggagaagcatatattattgcaatgggggcggcacaagacaacttcactttgaagatttgcaaggatactgatgaagtgacgcaacaagctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------gggaaacacagcgcgcagagctattagcagtgctacaaatgttgaat--------ccgcagccaacactactcccagttcacaccgattagagactgggcgtgtaccagcgctacaggctgcagagacgggtgccacttctaatgccacagatgagaacatgattgagacccgttgtgtggttaacaggaatggggtgttggaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacagatggggggacgg----acaccactgggtatgctacatgggacatagacattatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgagattcaacgcagaattcacatttgtcacaacgactaagaatggagaggctcgtccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcagttcctttcatgtcaccagctagcgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatacggattgtgcccaaacaatatgatgggcacttttgcagtgagagttgttagtagggaggcaagtcaattaaaactacagactagagtgtacatgaagcttaagcacgtgagggcctgggtcccaagaccgatcaggtctcagccatacctgcttaaaaacttccccaattacgacagtag----caagattgccaacagtgcacgggatcgatccagtat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaatttgggcaacaatctggcgccatctatgttggtaactatagagtggtcaatagacacttggctacccacaatgactgggccaacctggtgtgggaagatagttcgcgagacctgcttgtttcgtctaccactgcccagggttgcgatacgattgcccgttgtgagtgtcagacaggggtgtactattgtaactcgaggaggaaacattatccagtcagtttctctagacccagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggccactctgaacctggggattgtgggggtatcttgaggtgtcagcatggtgtggttggcatagtatccactggtggcaacggtcttgttggttttgctaacgtgagggacctcttatggttggatgaagaagccatggaacagggggtgtctgactatatcaag-ggactcggcgacgcttttggtattggctttactgacgcagtgtctagggaagtggaggctctgaaaaatcacctgattggctccgagggagcggtggagaagatcctgaagaacttggtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcatgggagcccatgggcgtggatcaaagcaaagacggcgtccattttaggcattcctatggcacagaagcagagcgcatcttggcttaagaagttcaacgatatggcgaacgctgcaaagggattggagtggatctccaataaaatcagcaaatttattgattggctcaaggaaaagatcattccagccgcaaaggagaaagttgagtttcttaataacctcaaacaactgccc-ttgatagaaaaccaaattgctaacttagaacagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccgctctatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattatcaggggctcaccaggaactggcaagtcactcgccacaggcataatagcaagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatacaagcaacaggtggtgacagtcatggatgatttgtgtcaaaacccagatggcaaagatatgtcattattttgtcaaatggtatccactgtcgattttatacccccaatggcttcactggaagagaaaggcgtatccttcacatctaaatttgttattgcttcaactaatgctagcaacatcattgtccccacggtctcagactctgacgctatccgtaggagatttttcatggattgtgatatcgaagtaactgactcttataagacagacttaggccgcttagatgcaggtagggccgcaaagctctgctcagagaacaacactgccaatttcaagaggtgcagcccgctagtgtgcggtaaagccatccaactaagagataggaagtccaaagtcaggtatagcgtagacactgtggtatcagaattggttagggagtatagtaacaggtctgctatagggaacactatagaagctttattccaaggacctcctaaatttaggcctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgc-agagatcaaggatggataatacctgaaacaccaaccaacgtggagcggcatctcaatagggcagtattagtgatgcaatccatcgctaccgtagtcgcagttgtgtcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcaagctctcaagaaacctgtgttgaggacagccactgttcaagggcctagcttagactttgccctgtctctcctgcgacgtaacattaggcaggtgcaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctatcttacctcgccactcacaaccagggaagaccatctgggttgagcacaagttggtcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacactagtaaccttagataccaatgaaaagtttagagatgtcaccaagttcattccagagaatatcagtggagccagtgatgccacattaataatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatacgggttcctaaatcttagtggtaagccaacccacaggaccatgatgtacaacttccccacaaaggctggacagtgtggaggcgtggtaacatctgtcggtaaaatcattggcatccacattgggggcaatgggcgtcaagggttttgcgctggcctgaagaggagttattttgcaagtgaacaaggtgagatccaatgggtgaaacctaacaaggagaccggcagattaaatatcaatggcccaacacgcaccaagttagagcccagtgtgttccatgatgtgtttgaaggcaacaaggagccagcagtcctaacaagcaaggatcccagattagaggttgactttgagcaagccctcttctccaagtatgtaggcaatgtcctccacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaatcagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaggcaattgacctccacactagcgcagggtacccatacagtgctctgggcataaagaagagggacatattagatcctactactagggacacaacaaaaatgaagttctacatggataagtatggcttggacttaccttactccacctatgtcaaagatgaacttaggtctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgactcagtgtacctcagaatgacctttggtcatctgtatgaagcattccatgcaaatccagggactgtgaccggatcagcagttgggtgcaatccggatgtgttctggagtaaactcccaatcctactcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgagacattggctactcagaggaagcagtgtcactcatagaaggaataaatcatactcatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccgtcaggatgttctggcacctccattttcaactcgatgatcaacaacatcatcatcaggacgcttttaatcaaaacctttaaagggatagatctagacgagttgaacatggtggcctatggagatgatgtgctagctagttatcctttccctattgattgttttgagctagctaagactggcaaagaatatgggctgaccatgacacctgcggacaaatcaccttgcttcaatgaagtgacgtgggaaaacgccacctttttgaagagagggtttctgccagatcatcaattcccattcttgattcatcccataatgcccatgaaagagatccatgaatccattcgctggaccaaggatgcgtgcaatactcaggaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgagaaatttgtgagtacaattagatcagtcccagttgggaaagcattggcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289403.1_Coxsackievirus_A10_isolate_CV-A10/P737/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttacccgactaactacttcgagaaacc-tagtagcaccaccgaagctgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagccactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaacca-ggggg-ttgtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcatgatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcagcagagctattatc-----tacctg----tttgtt-ggatacattccat-----taacact--------------tacatccttcaat-acactgcactatattctaacgctgaacgcaagaaaa-------tgggggctcaagtctcgacacaaaaatccggcagtcatgagactggtaacgtagccactg-gaggatctacaataaacttcactaacatcaactattataaagattcttatgccgcgtcagcaacccggcaagacttcacacaagatccaaagaaattcacacaaccagtgttagattctattagagaactatcagcccctctgaactccccctctgtagaagcttgtggctatagtgacagggtcgcccagcttactgttgggaactcctccattactacccaagaggctgctaacattgtattagcttatggagagtggcctgagtactgccctgatacagatgcaactgccgtggacaagccaactcgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------attcgactggttggtattggaaattccctgacgtgctgaacaaaacgggggtattcggacagaatgcccagtttcattacttgtaccggtcaggtttctgcttgcatgtgcagtgtaatgctagtaaatttcaccagggggcccttcttgtggctgtgataccagaatttgtggttgctggcagaggatctaacacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggtaccaccggtgctacatttcatgatccatacattctagattccggggtaccattgagtcaggctctaatatacccccatcagtggatcaatctccgcactaacaactgtgcaactgttatagttccgtacattaatgctgttccgtttgactcagccatcaaccatagcaattttgggttagtagtgataccagttagtccgctgaagtattcgtctggggcaaccactgcaatcccaatcaccatcactatagcccccctgaattcagagttcggaggactgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgacgacactgcagcgcccatcctcccaggattcacccccacacccacaattcatataccaggggaagtacactctttgctggagttgtgcagggtggagaccattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagctgatgagttgtgtgctgcgtttatggttgatccaggccggattgggccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatcctttatggcaacaggcaagatgctagtggcctactccccgcccggaagcgctcaaccagccaacagagaaaccgccatgctgggcacgcatgttatttgggactttgggctacaatcgtcagtctcattggtgataccgtggatcagtaacactcacttccgcactgccaagacaggtgggaattacgattactacacggcaggtgtagtgaccttatggtatcaaaccaattacgtggtcccaccagaaacccctggagaggcatatattattgcaatgggggcggcacaagacaacttcactttgaaaatttgcaaggatactgatgaagtgacacaacaggctgtgttgcaaggtgacccc--------gtggaggatataatcc---atgacgctct--------------------------gggaagcacagcgcgcagagctatcagtagtgctacaaatgttgaat--------ccgcagccaacaccactcccagttcacaccgattagagactggacgcgtgccagcgctacaggctgcagagacaggtgccacttctaatgccacagatgagaacatgattgagacccgttgtgtggttaatagaaatggggtgttggaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacaggtggggggacgg----acaccactgggtatgccacatgggacatagacattatgggctttgttcaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgtcacaacgactgagaacggagaggctcgtccgtacatgctgcaatatatgtatgtgcctccaggtgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtgtcagttcctttcatgtctccagctagcgcatatcagtggttttatgatggttaccccactttcggccagcacccagaaacctcaaacacaacatacggattgtgcccaaacaatatgatgggcacttttgcagtgagagttgttagcaaggaagcaagccaactgaaattacagactagagtgtacatgaagcttaagcacgtaagggcctgggtcccaagaccgatcaggtcccagccatatttgcttaaaaacttccccaattacgacagtag----caagattagcaacagcgcacgggaccgatccagcat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaatttgggcaacaatctggcgccatctacgttggtaattatagagtggtcaatagacacctggccacccacaatgactgggccaacctggtgtgggaagatagttctcgagacctgcttgtttcgtctaccactgctcagggttgcgacacgattgcccgttgtgagtgtcagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcatctttgtagaggccagtgagtattaccctgctagatatcaatctcacctaatgctcgccgcaggccactctgagcctggggactgcgggggtattttaaggtgtcagcatggtgtggttggcatagtgtccactggtggcaacggtcttgtcggttttgctaacgtgagggacctcttgtggttagatgaagaggccatggaacagggagtttctgactatatcaag-ggactcggcgacgctttcggtactggttttactgatgcagtgtctagggaagtggaggctctaaaaaatcacctgattggttccgagggagcagtggagaagatcttgaagaacttggtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcatgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggcattcctatggcacagaagcagagtgcatcttggcttaagaagttcaacgacatggcgagcgctgcgaagggactggagtggatctccaacaaaatcagtaagtttattgattggctcaaggaaaagatcattccggccgcaaaggaaaaagttgagtttcttagtaacctcaagcaactgcct-ttgatggaaaaccaaattgctaacttagaacagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataactacatgcagttcaagagcaaacaccgtattgaacccgtatgcttaattatcaggggctcaccaggaaccggcaagtcactcgccacaggtataatagcaagagccattgcagacaaatatcactccagtgtgtactcccttccaccagacccagaccactttgatggatataagcaacaggtggtgacagtcatggatgatttgtgtcaaaacccagatggtaaagatatgtcattgttttgccaaatggtatccactgtcgattttatacccccaatggcttcactggaagagaaaggcgtatccttcacatctaaatttgttattgcttcaactaatgctagcaacatcatcgtccccacagtctcagactctgacgctattcgtaggagatttttcatggattgtgatatcgaagtgactgactcttataagacagacttaggccgtttagatgcaggtagggccgcaaagctctgctcagagaataacactgccaatttcaagaagtgcagcccgctagtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagcgtggacactgtggtatcagaattggttagggagtacaataacaggtctgcaataggaaacactatagaagctttatttcaggggcctcctaaatttaggcctataagaatt---agtcttgaagagaaacccgctccagatgctattagtgacctgcttgctagcgttgacagtgaagaggtgcggcagtactgc-agagatcaaggatggataattcctgaaacgccaaccaacgtggagcggcatctcaatagggcagtgttggtgatgcaatccatcgctactgtagttgcagttgtatctcttgtttatgtcatctacaagctgtttgctggtttccaaggcgcatattctggagcgcccaagcaaactctcaagaaacctgtgttgagaacagccactgttcaagggcccagcttagattttgccctgtctctcctgcggcgtaacatcaggcaggtgcaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctatcttacctcgtcactcacaaccagggaaaaccatctgggttgagcacaagctggtcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacactagtaaccctagataccaatgagaagttcagggatgttaccaagttcatcccagagaatatcagtggagccagtgatgccacattagtaatcaacactgaacacatgccatcgatgtttgtcccggtaggagatgttgttcaatacgggttcctaaatcttagtggtaagccaacccataggaccatgatgtacaatttccctacaaaggctggacagtgtggaggcgtggtaacatctgtcggtaaaatcattggcatccacattggaggcaacgggcgacaagggttttgcgctggcctgaagagaagttattttgcaagtgaacaaggcgagatccaatgggtgaaacctaacaaggagaccggcagattaaatatcaatggcccaacacgcaccaagttagagcccagtgtgtttcatgatgtgtttgagggcaacaaggagccagcagtcctaacaagtaaggatcccagattagaggttgactttgagcaagccctattctccaagtatgtgggcaatgtcctccacgaacctgatgaatatgtgaagcaggcagctctccactatgcaaatcagctcaagcaattggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccacactagtgcaggatacccatacagtgctctgggcataaagaagagggacatactagatcctaccactagggacacaactaaaatgaagttctacatggataagtatggcttggacttaccttactccacctacgttaaagatgaactgaggtctctggataagatcaagaaagggcagtctcgcttgatagaagctagcagcttgaatgactcagtgtacctcagaatgacttttggccatctgtatgaagcattccatgcaaatccagggactgtgaccggatcagcagttgggtgcaacccggatgtgttttggagtaaactcccgatcctactcccaggttcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttgcgggacattggctattcagaggaggcagtgtcactcatagaaggaataaatcatacccatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccgtcaggatgttctggcacctccattttcaactcgatgatcaacaacatcatcatcaggacacttttaatcaaaacctttaaagggatagatctagacgagttgaatatggtggcttatggagatgatgtgctagctagttatcctttccccatcgattgccttgagctagctaagactggcaaggaatatgggctgaccatgacacctgcggacaaatcaccttgtttcaatgaagtgacgtgggaaaacgctacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcccacaatgcccatgaaagagatccacgaatccatacgctggaccaaagatgcgtgcaatactcaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaattagatcagtcccagttgggaaagcattggcaattccgaactttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-------tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP009580.1_Coxsackievirus_A10_strain_FY07/AH/CHN/2013_complete_genome
---------------------------------------ttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tatgcacgccact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccaccgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaacca-ggggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttgccatatagctattggattggccatccgg--tgtgcaacagagctgttatc-----tacttg----tttgtt-ggatacattccat-----taacact--------------caaatccttcaat-acattgcactatattctaacgctgaacgcaagaaaa-------tgggggctcaagtctcgacgcaaaaatccggtagtcatgagactggtaacgtagccactg-gaggatctacaataaacttcactaacatcaactattacaaagattcttatgccgcgtcagcaacccggcaagacttcacacaagatccaaagaaattcacacaaccagtgttagattctattagagaactatcagcccctttgaactccccttctgtagaagcttgtggctatagtgacagggttgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggataagccaactcgcccggacgtgtctgtcaacaggttctacactttggactccaagatgtggcaagaaa------------------actcgactggttggtattggaaattccctgatgtgctgaacaagacgggggtgttcggacagaatgctcagtttcattatttgtaccggtcaggtttctgcttgcatgtacaatgtaatgccagtaaatttcaccagggggcccttcttgtggctgtgataccagaatttgtgattgctggcagaggatctaacacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggtaccaccggtgctacatttcatgatccatacgttctggattccggggtaccattgagtcaggctctaatatacccccatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccgtacatcaatgctgttccttttgactcagccatcaaccatagcaattttgggctaatagtgataccagttagtccactgaagtattcgtccggggcaaccactgcaatcccaatcaccatcactatagcccccctgaattcagagttcggaggactgcgacaagccgtcagtcaaggtattccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgatactgcagcgcccatcctcccaggattcacccccacacctacaattcatataccaggggaagtgcactctttgctggagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aggccgatgagttgtgcgctgcgtttatggttgatccaggccggattgggccttggcaatctaccttagttggacagatttgccggtattatacacaatggtccgggtctttgaaggtgacctttatgttcacaggatcctttatggcaacaggcaagatgctagtggcctactccccgcccggaagcgctcaaccagccaacagagaaaccgccatgctgggcacgcatgtcatttgggactttgggctacaatcgtcagtttctttggtgataccgtggatcagtaacactcacttccgcactgccaagacaggtgggaattacgattactacacagcaggtgtagtgaccttatggtatcaaaccaattacgtagtcccaccagaaacccctggagaggcatatattattgcaatgggggcggcacaagacaacttcactttgaaaatttgcaaggatactgatgaagtgacgcaacaggctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------gggaagcacagcgcgcagagctatcagcagtgctacaaatgttgaat--------ccgcagccaacaccactcccagttcacaccgattagagactgggcgcgtgccagcgctacaggctgcagagacaggtgccacttctaatgccacagatgagaacatgattgagacccgttgtgtggttaatagaaatggggtgttagaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacagatggggggacag----acaccactgggtatgctacatgggacatagacattatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggtttaacgcagaatttacatttgtcacaacgactgataatggagaggctcgtccgtacatgctgcaatatatgtatgtgccccctggtgcccccaaaccgacgggaagggatgccttccaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcagttcctttcatgtcaccagctagcgcatatcagtggttctatgatggttaccccactttcggccagcacccggagacctcaaacacaacatacggattgtgcccgaacaacatgatgggcacttttgcagtaagagttgttagtaggaaggcaagccaactaaagttgcagactagggtgtacatgaagcttaagcatgtgagggcttgggtcccaagaccgatcaggtctcaaccatacttgcttaaaaacttccccaattacgacagtag----caagattaccaacagcgcacgggaccgatccagtat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaatttgggcaacaatctggcgccatctacgttggtaattatagagtggtcaatagacacctggccacccacaatgactgggccaacctggtgtgggaagatagttctcgagacttgcttgtttcgtctaccactgcccagggttgcgacacgattgcccgttgtgagtgtcagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgtctttgtagaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggccactctgagcctggggattgcgggggtatcttgaggtgtcagcatggtgtggttggtatagtgtccactggtggcaacggtcttgtcggttttgctaacgtgagggacctcttgtggttggatgaagaagccatggaacagggagtgtctgactatatcaag-ggactcggtgacgcttttggtactggttttactgatgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttctgagggagcagtggagaagatcctgaagaacttggtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcatgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggcattcctatggcacagaagcagagtgcatcttggcttaagaagttcaacgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaggaaaagatcattccggctgcaaaggaaaaagttgagtttcttagtaacctcaagcaactacct-ttgatagaaaaccaaattgctaacttagaacagtctgctgcttcacaagaggaccttgaagccttgtttggtaatgtgtcatacctggctca---------cttttgtcgcaagttccagcctctctatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgcttaattatcaggggctcaccaggaactggcaagtcactcgccacaggtataatagcaagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatataagcaacaggtggtgacagtcatggatgatttgtgtcaaaacccagatggcaaagatatgtcattgttttgccaaatggtatccactgtcgactttatacccccaatggcttcactggaagagaaaggcgtgtccttcacatctaaatttgtcattgcttcaactaatgctagcaacatcatcgtccccacggtctcagactctgacgctattcgtaggagatttttcatggattgtgatattgaagtgactgactcttataagacagacttaggccgcttagatgcaggtagggctgcaaagctctgctcagagaacaacactgccaatttcaagaggtgcagcccgttagtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagcgtagacactgtggtatcagaattggttagggagtataataacaggtctgctataggaaacactatagaagctctatttcaagggcctcctaaatttaggcctataaggatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgc-agagatcaaggatggataattcctgaaacgccaaccaacgtggagcggcatctcaatagggcagtgttagtgatgcaatccatcgctactgtggttgcagttgtatcccttgtttatgttatctacaagctgtttgctggtttccaaggcgcatattctggagcgcccaagcaagttctcaagaaacctgtgttgagaacagccactgttcaagggcctagcttagattttgccctgtctctcctgcgacgtaacatcaggcaggtgcaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctatcttacctcgtcactcacaaccagggaagaccatctgggttgagcacaagctggtcaatgtgcttgatgctgttgagctagtagatgaacaaggtgttaatttggagcttacactagtaaccttagataccaatgagaagtttagagatgttaccaagttcattccagagagtattagcggagccagtgatgccacattagtaatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatatgggttcctaaatcttagtggtaagccaacccacaggaccatgatgtacaatttccctacaaaggctggacagtgtggaggcgtggtaacatctgttggtaaaatcattggcatccacattggaggcaatgggcgacaagggttttgcgctggcctgaagaggagttattttgcaagtgaacaaggcgagatccaatgggtgaaacctaacaaggagaccggcaggttaaatatcaacggcccaacacgcaccaagttagagcccagtgtgttccatgatgtgtttgagggcaacaaggagccagcagtcctaacaagtaaggatcccagattagaggttgactttgagcaagccctcttctccaagtatgtgggcaacgtcctccacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaatcaactcaagcaattggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaggcaattgacctccacactagcgcagggtacccatacagtgctctgggcataaaaaagagggacatactagatcctaccactagggatataacaaaaatgaagttttatatggataagtatggtttggacttgccttactccacctacgtaaaagatgaacttaggcctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgactcagtgtacctcagaatgacttttggccatctgtatgaagcattccatgcaaatccagggactgtgaccggatcagcagttgggtgcaatccggatgtgttctggagtaagctcccaatcctactcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctattcagaggaggcagtgtcactcatagaaggaataaatcacacccatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccgtcaggatgttctggtacctccattttcaactcgatgatcaacaacatcatcatcaggacgcttttgatcaaaacctttaaagggatagatctagacgagttgaatatggtggcttatggagatgacgtgctagctagttatcctttcccaattgattgccttgaactagctaagactggcaaagaatatggactgaccatgacacctgcagacaaatcaccttgcttcaatgaagtgacgtgggaaaacgccacctttctgaagagagggtttctaccagaccatcaattcccgttcttaattcatcccacaatgcccatgaaagagatccacgaatccatacgctggaccaaggatgcgtgcaatactcaagaccatgtgcgttctctgtgtttattagcttggcacaatggcaaggatgaatatgaaaaatttgtgagcacaattagatcagtcccagttgggaaagcattggcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU578136.1_Coxsackievirus_A10_isolate_Qingdao2/SD/CHN/2014_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-ta-ccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccttcaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-gggtacattccat-----taacacc--------------taaatccttcaat-acattgcactatatcttaacactgaacgcaaggaaa-------tgggagctcaggtttcgacgcaaaaatccggcagtcatgagactggtaacgtagccactg-gagggtctacaataaactttactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccaaagaaattcacacaaccagtgttagattctattagagaactatcagccccattgaactccccttctgtggaagcttgcggctatagtgatagggtcgcccagctcactgttgggaactcctccatcactacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgtcctgacacagacgcaactgccgtggataaaccaactcgcccggacgtgtctgtcaacaggttctacactttagactccaaaatgtggcaagaaa------------------attcgactggttggtattggaagttccctgacgtgctaaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcaggtttctgcttgcatgttcagtgtaatgctagtaaatttcaccagggggcccttcttgtggctgtgataccagagtttgtgattgctggtagaggatctaacacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggcaccaccggtgctacatttcatgatccatatgttttggattccggggtgccattgagtcaggctctaatatacccccatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgactcagccatcaaccatagcaattttgggttagtagtgataccagttagcccgctgaagtattcgtccggggcaaccactgcaatcccaatcactatcactatagcccctctgaattcagagttcggaggactgcgacaagctgttagtcaaggcatcccagctgagctcaggcccggaactaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccagggttcacccccacacccacaattcatataccaggggaagtacactctttgctagagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgacccaggtcgaattggaccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatcctttatggcaacaggcaagatgctggtggcctactccccgcccggaagcgctcaaccagccaacagggagaccgccatgctgggcacgcatgtcatttgggactttggactacaatcgtcagtctctttggtgataccgtggatcagcaacactcacttccgcactgccaaaacaggtgggaattacgattattatacggcaggggtggtgaccttatggtatcaaaccaactacgtggtcccgccagaaacccctggagaggcatatattattgcaatgggggcggcacaagacaacttcaccttgaagatttgcaaggatactgatgaagtgacacaacaggctgtgttacaaggtgaccct--------gtggaggatataattc---atgacgctct--------------------------gggaaacacagcgcgcagagctattagtggtgctacaaatgttgaat--------tcgcagccgacactactcctagttcacaccgattagagactggacgcgtgccagcgctacaagctgcagagacgggtgccacatctaatgccacagatgagaacatgattgagacccgttgtgtgattaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgctctggattggtgggagtagttaacctcacagatggggggacgg----gcaccactggatatgctacatgggacatagacattatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgtcacaacgactaagaatggagaggctcgtccgtatatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtctttgtcaagctcaccgaccctcctgcacaagtctcagttcctttcatgtcaccagctagcgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcgaacacaacatacggattgtgcccaaacaatatgatgggcacttttgcagtgagagttgttagcagggaggcaagtcaactaaaactacagaccagagtgtacatgaagcttaagcatgtaagggcctgggtcccaagaccgatcaggtctcagccatatctgcttaaaaacttccccaattacgacagtag----taagatcaccaacagtgcacgggatcgatccagtat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaatttggacaacaatctggcgccatctacgttggtaactacagggtggtcaatagacacctggccacccacaatgactgggctaacctggtgtgggaagatagttctcgagacctgcttgtttcgtctaccactgcccagggttgcgatacgattgcccgttgtgagtgccagacaggggtgtactattgtaactcaaggaggaaacattatccagtcagcttttctaagcctagccttgtctttgtagaggccagtgagtattaccctgctaggtatcagtctcacttaatgctcgctgcaggccactctgaacctggagattgcgggggtatcttgaggtgtcagcatggtgtagtgggtatagtatccactggtggcaacggtcttgtcggctttgctaacgtgagggacctcttatggttggatgaagaagccatggagcagggagtgtctgactatatcaag-ggactcggcgacgcttttggtactggttttactgacgcagtatccagggaagtggaggctctgaaaagttacctgattggatccgagggagcggtggagaagatcctgaagaacttggtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcatgggagcccatgggcgtggatcaaagcaaagacggcgtccattttaggtatccctatggcacagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaatgctgcaaagggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaggaaaagattattccagccgcaaaggaaaaagttgagtttctcaataacctcaagcaactgcct-ttgatggaaaaccagattgctaacttggaacagtctgctgcctcacaagaagaccttgaagttatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctacgcaaccgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctaattatcaggggctcaccaggaactggcaagtcactcgccacaggtataatagcaagagccatagccgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatgggtacaagcaacaggtagtgacagtcatggatgatttgtgtcaaaacccagatggcaaagatatgtcattgttttgtcaaatggtatccactgttgattttataccccctatggcttcactggaggagaaaggcgtatccttcacatctaaatttgttattgcttcaactaatgctagcaacatcattgtccccacggtctcagactctgacgctattcgtaggagatttttcatggactgtgatatcgaagtgaccgactcttttaagacagacttaggccgcttagatgcaggtagggccgcaaagctctgttcagagaacaacactgccaattttaagaggtgcagcccgttagtgtgcggcaaggccatccaactgagagataggaagtccaaagtcaggtatagcgtagatactgtggtgtcagaattggttagggagtataataacaggtccgctataggaaacactatagaagccttatttcaagggcctcctaaatttaggcctataagaatt---agtcttgatgagaaacctgctccagatgctattagtgacctgcttgctagtgttgacagtgaggaggtgcggcagtactgc-agagatcaaggatggataattcctgaagcgccaaccaacgtggagcggcatctcaatagggcagtattagtgatgcaatccatcgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcaaaccctcaagaaacctgtgttgagaacagctactgttcaaggacccagcttagattttgccctgtctctcctgcgacgcaacatcaggcaggtgcaaactgaccaagggcactttaccatgcttggggtgcgtgaccgccttgctatcttacctcgccactcacaaccagggaagaccatctgggttgagcacaagttggtcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacactagtaaccctagataccaatgagaagttcagagatgtcaccaagttcattccagagaatatcagtggagccagtgacgccacactagtaatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatacgggttcctgaatcttagtggtaagccaacccacaggaccatgatgtacaatttccctacaaaggctggacagtgtggaggcgtggtaacatctgtcggtaaaatcattggcatccacattggaggcaatgggcgacaggggttctgcgctggcctgaaaaggaattattttgcaagtgaacaaggtgagatccaatgggtgaaacctaacaaggagaccggcagattaaatatcaatggtccaacacgcaccaagttagagcccagtgtgttccatgatgtgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattggaggttgactttgagcaagccctcttctccaagtatgtaggcaatgtcctccacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaatcagctcaagcaactggatataaacaccaataagatgagcatagaggaagcgtgctatggcacagagaacctggaagcaattgacctccatactagtgcagggtacccatacagtgctctgggcataaagaagagggacatactagatcctaccactagggacacaacaaaaatgaagttctacatggataagtatggcttggacttaccttactccacctacgttaaagatgagctgaggtctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgactcagtgtacctcagaatgacttttggccatctgtatgaagcattccatgcaaatccagggactgtgaccgggtcagcagttgggtgcaatccggatgtgttctggagtaaactcccaatcctactcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgagacattggctactcagaggaagcagtgtcactcatagaaggaataaatcatactcatcatgtgtatcggaacaaaacgtattgtgtccttggtgggatgccatcaggatgttctggcacctccattttcaactcgatgatcaacaacatcattatcaggacgcttttaatcaaaacctttaaagggatagatctagacgagttgaatatggtggcctatggagatgatgttctagctagttaccctttccccattgattgccttgagctagctaagactggtaaagaatatggactgaccatgacaccggcggacaaatcaccttgcttcaatgaagtgacgtgggaaaacgccacctttctgaagagagggtttctaccagaccatcaattcccattcttaattcatcccataatgcccatgaaagagatccacgaatccatacgttggaccaaagatgcgtgcaacactcaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagtacaattagatcagtcccagttgggaaagcattggcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-cactagaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289395.1_Coxsackievirus_A10_isolate_CV-A10/P118/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccttcaaacca-gaggg-tggtgcgtcgt-acgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tctt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatt-----tacttg----tttgtt-ggatacattccat-----taacacc--------------taaatccttcaat-acattgcactatatcttgacactgaacgcaagaaaa-------tgggagctcaagtttcgacgcaaaaatccggcagtcatgagactggtaacgtagccactg-gagggtctacaataaacttcactaacatcaactattataaagattcttacgctgcgtcagctacccggcaagacttcacacaagatccaaagaaattcacacaaccagtgttagattctattagagaactatcagcccctttgaactccccttctgtggaagcttgtggttatagtgatagggtcgctcagctcactgttgggaactcctccattactacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggataaaccaactcgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------attcgactggatggtattggaagttccctgacgtgctgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcaggtttctgcttgcatgtacagtgcaatgctagtaaatttcaccaggaggcccttcttgtggctgtgataccagagtttgtgattgctggcagaggatctaacacaaaaccaaatg---aagcgccccatccagggtttaccacaactttccctggcaccaccggtgctacatttcatgatccatacgttatggattccggagtaccactgagtcaggctctaatatacccccatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgactcagccatcaaccatagcaattttgggctaatagtgataccagttagcccgctgaagtattcgtccggggcaaccactgcaatcccaattactattactatagcccccctgaattcagagttcggaggactgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggaccaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccggggttcacccccacacccacaattcatataccaggggaagtacactctttgctggagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccaggccgaattggaccttggcaatccaccttagttggacagatttgccggtattacacacaatggtctgggtctttgaaggtgacctttatgttcacaggatcctttatggctacaggcaagatgctggtggcctactccccacccggaagcgctcaaccagctaacagggagaccgccatgctgggcacgcatgtcatttgggactttggactacaatcgtcagtctctttggtaataccgtggatcagtaacacacacttccgcactgctaaaacaggtgggaattacgattactacacggcaggtgtggtgactttatggtaccaaaccaactacgtggtcccgccagaaactcctggagaggcatatattattgcaatgggggcggcacaagacaacttcaccttgaagatttgcaaggatactgatgaagtgacacaacaggctgtgttgcaaggtgaccct--------gtggaggatataattc---atgacgctct--------------------------ggggaacacagcgcgcagagctattagtggtgccacaaatgttgaat--------ccgcagccaacactactcctagttcacaccgattagagactggacgcgtgccagcgctacaggctgcagagacgggtgccacatctaatgccacagatgagaatatgattgagacccgttgtgtgattaacagaaatggggtgttggaaaccactatcaaccactttttctcccgctctggattagtgggagtagttaacctcacagatggggggacgg----acaccactggatatgctacatgggacatagacattatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgtcacaacgactgagaatggagaggctcgtccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgccttccaatggcaaacagcaactaacccatcagtcttcgtcaagctcactgaccctcctgcacaagtttcagttcctttcatgtcaccagctagcgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcgaacacagcatacggattgtgcccaaacaatatgatgggcacttttgcagtgagagttgttagcagggaggcaagccaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgatcaggtctcagccatatctgcttaaaaacttccccaattacgacagtag----caagattaccaacagtgcacgggatcgatccagtat---ta-------------------------------------------------------------------agcaagctaatatgggt--------aaatttgggcaacaatctggcgccatctacgttggtaattacagagtggtcaatagacacctggccacccacaatgactgggccaacctggtatgggaagatagttctcgagatctgcttgtttcgtctaccactgcccagggttgcgatacgattgcccgttgtgagtgtcagacaggggtgtactattgtaactcaaagaggaaacattacccagtcagcttctctaagcctagccttgtcttcgtagaggccagtgagtattaccctgctagatatcagtctcatttaatgctcgctgcaggccactctgaacctggggattgcgggggtatcttgaggtgtcagcatggtgtggtgggcatagtatccactggtggcgacggtcttgttggttttgctaatgtgagggacctcttatggttggatgaagaagccatggaacagggagtgtctgactatatcaag-ggactcggcgacgcttttggtactggttttactgacgcagtatccagggaagtagaggctctgaaaaattacctgattggttccgagggagcggtggagaagatcctgaagaacttggtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctaattggatgtcacgggagcccatgggcgtggatcaaagcaaagacagcgtccattttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgctgcaaaaggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaggaaaggattattccagccgcaaaggaaaaagttgagtttcttaacaacctcaagcaactgcct-ttgatggaaaaccaaattgctaacttggaacagtctgctgcttcacaagaagaccttgaagttatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctacgcaaccgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattatcaggggctcaccaggaaccggcaagtcactcgccacaggtataatagcaagagccattgccgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatacaagcaacaggtggtgacagtcatggatgatttgtgtcaaaacccagatggcaaagatatgtcattgttttgtcaaatggtatccactgttgattttatacccccaatggcttcactggaagagaaaggcgtatccttcacatctaaatttgttattgcttcaactaatgctagtaacatcatagtccccacggtctcagactctgacgctattcgtaggagatttttcatggactgtgatatcgaggtgactgactcttataagacagacttaggccgcttagatgcaggtagggctgcgaagctctgctcagagaacaacactgccaattttaagaggtgcagtccactggtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagcgtagacactgtggtatcagaattggttagggagtataataacaggtccgctataggaaacactatagaagccttatttcaagggcctcctaaatttaggcctataagaatt---agtcttgatgagaaacctgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgt-agagatcaaggatggataattcctgaagcgccaaccaacgtggagcggcatctcaatagggcggtgttagtgatgcaatccatcgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggttttcaaggtgcatattctggagcgcccaagcaaaccctcaagaaacctgtgttgagaacagccactgttcaaggacccagcttagattttgccctgtctctcctgcgacgcaacatcaggcaggtgcaaactgaccaagggcactttaccatgcttggggtgcgtgaccgccttgctatcttacctcgccactcacaaccagggaagactatctgggttgagcacaagttggtcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacactagtaaccctagataccaatgagaagtttagggatgtcaccaagttcattccagagaatatcagtggagccagtgatgccacattagtaatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatacgggttcctaaatcttagtggtaagccaacccacaggaccatgatgtacaatttccctacaaaggctggacagtgtggaggcgtggtaacatctgtcggtaaaatcattggtatccacattggaggcaatgggcgacaagggttttgcgctggcctgaagaggaattattttgcaagtgaacaaggtgagatccaatgggtgaaacctaacacggagaccggcagattaaacatcaatggtccaacacgcaccaagttagagcccagtgtgttccatgatgtgtttgagggtaacaaggagccagcagtcctaacaagcaaggatcccagattggaggttgactttgagcaagccctcttctccaagtatgtgggcaatgtcctccacgaacctgatgaatatgtgagacaggcagccctccactacgcaaatcagctcaagcaactggatataaataccaataaaatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccacactagtgcaggatacccatacagtgctctgggcataaagaagagggacatactagatcctaccactagggacacaactaaaatgaagttctacatggataagtatggcttggacttaccttactccacctacgttaaagatgaactgaggtctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgactcagtgtacctcagaatgacttttggccatctgtatgaagcattccatgcaaatccagggactgtgaccggatcagcagttgggtgcaatccggatgtgttctggagtaaactcccaattctactcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgagacattggctactcagaggaagcggtgtcactcatagaaggaataaatcatacccatcatgtgtatcggaacaagacatattgtgtccttggtgggatgccgtcaggatgttctggtacttccattttcaactcgatgatcaacaacatcatcatcaggacgcttttaatcaaaacctttaaagggatagatctagatgagttgaatatggtggcctatggagatgatgtgctagctagttatcctttccccattgattgccttgagctagctaagactggtaaagaatatgggctgaccatgacacctgcggacaaatcaccctgcttcaatgaagtgacgtgggaaaacgccacctttctgaagagagggtttctaccagaccatcaattcccattcttaattcatcccataatgcccatgaaagagatccacgaatccatacgttggaccaaagatgcgtgcaatactcaagaccatgtgcgctctctgtgtttattagcttggcataatggtaaggatgaatatgaaaaatttgtgagtacaattagatcagtcccagttgggaaagcattggcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-a-actg--------gtgggggtaaatttgt-ta-taaca-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ641623.1_Coxsackievirus_A10_strain_CVA10/JB141310010_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct--cc---ccccga-----aactt-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-ta-ccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccgtaggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccttcaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tctt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccat-----taacacc--------------taaatccttcaat-acattgcactatatcttgacactgaacgcaagaaaa-------tgggagctcaagtttcgacgcaaaaatccggtagtcatgagactggtaacgtagccactg-gagggtctacaataaactttactaacatcaactattataaagattcttacgctgcgtcagctacccggcaagacttcacacaagatccaaagaaattcacacaaccagtgttagattctattagagaactatcagcccctttgaactccccttctgtggaagcttgtggctatagcgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggataaaccaactcgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------attcgactggttggtattggaagttccctgacgtgctgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcaggtttctgcttgcatgtacagtgtaatgctagtaaatttcaccagggggcccttcttgtggctgtgataccagagtttgtgattgctggcagaggatctaacacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggcaccactggtgctacatttcatgatccatacgttatggattccggggtaccattgagtcaggctctaatatacccccatcaatggatcaacctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgactcagccatcaaccatagcaattttgggctaatagtgataccagttagcccgctgaagtattcgtctggggcaaccactgcaatcccaattactatcactatagcccccctgaattcagagttcggaggattgcgacaagccgtcagtcaaggtatcccagctgagctcaggcccgggaccaatcagttcctgaccacagatgatgacactgcagcgcccatcctcccagggttcacccccacacccacaattcatataccaggggaggtgcactctttgctggagttgtgtagggtggagactattttggaagtaaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccaggccgaattggaccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatcctttatggcaacaggcaagatgctggtggcctactccccgcccggaagcgctcaaccagccaacagggagaccgctatgctgggcacgcatgtcatttgggactttggactacaatcgtcagtctctttggtaataccgtggatcagtaacactcacttccgcactgctaaaacaggtgggaattacgattactacacggcaggtgtggtgaccttatggtaccaaaccaactacgtggtcccgccagaaactcctggagaggcatatattattgcaatgggggcggcacaagacaacttcaccttgaagatttgcaaggatactgatgaggtgacacaacaggctgtgttgcaaggtgaccct--------gtagaggatataattc---atgacgctct--------------------------ggggaacacagcgcgcagagctattagtggtgctacaaatgttgaat--------ccgcagccaacactactcctagttcacaccgattagagactggacgtgtgccagcgctacaggctgcagagacgggtgccacatctaatgccacagatgagaatatgattgagacccgttgtgtgattaacaaaaatggggtgttggaaaccactatcaaccactttttctcccgctctggattagtgggagtagttaacctcacagatggggggacgg----acaccactggatatgctacatgggacatagacattatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgttacaacgactgagaatggagaggctcgtccgtacatgctgcaatatatgtatgtaccccctggcgcccccaaaccgacgggaagggatgccttccaatggcaaacagcaactaacccatcagtcttcgtcaagctcactgacccccctgcacaagtctcagttcctttcatgtcaccagctagtgcatatcagtggttttatgatggttaccccaccttcggccagcacccggagacctcgaacacaacatacggattgtgcccaaacaatatgatgggcacttttgcagtgagagttgttagcagggaggcaagccaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgatcaggtctcagccatatctgcttaaaaacttccccaattacgacagtag----caagattaccaacagtgcacgggatcgatccagtat---ta-------------------------------------------------------------------agcaagctaatatgggt--------aaatttggacaacaatctggcgccatctacgttggtaattacagagtggtcaatagacacctggccacccacaatgactgggccaacctggtatgggaagatagttctcgagatctgcttgtttcgtctaccactgcccagggttgcgatacgattgcccgttgtgagtgtcaaacaggggtgtactattgtaactcaaggaggaaacattacccagtcagcttctctaagcctagccttgtcttcgtagaggccagtgagtattaccctgctagatatcaatctcatttaatgctcgctgcaggccactctgaacctggggattgcgggggtatcttgaggtgtcagcatggtgtggtgggcatagtatccactggtggcgacggtcttgttggttttgctaatgtgagggacctcttatggttggatgaagaagccatggaacagggagtgtctgactatatcaag-ggactcggcgacgcttttggtactggttttactgacgcagtatccagggaagtagaggctctgaaaaattacctgattggttccgagggagcggtggagaagatcctgaagaacttggtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcacccttactgcaactctagctctgattggatgtcacgggagcccatgggcgtggatcaaagcaaagacagcgtccattttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgctgcaaaaggattggagtggatctctaataaaatcagtaaatttattgattggctcaaggaaaggattattccagccgcaaaggaaaaagttgagtttcttaacaacctcaagcaactgcct-ttgatggaaaaccaaattgcaaacttggaacagtctgctgcttcacaagaagaccttgaagttatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctacgcaaccgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattatcaggggctcaccaggaaccggcaagtcactcgccacaggtataatagcaagagccattgccgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatacaagcaacaggtggtgacagtcatggacgatttgtgtcaaaacccagatggcaaagatatgtcattgttttgccaaatggtatccactgttgattttatacccccaatggcttcactggaagagaaaggcgtatccttcacatctaaatttgttattgcttcaactaatgctagcaacatcatcgtccccacggtctcagactctgacgctattcgtaggagatttttcatggactgtgatatcgaagtgactgactcttataagacagacttaggccgcttagatgcaggtagggccgcaaagctctgctcagagaacaacactgccaattttaagaggtgcagtccgctagtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagcgtagacactgtggtatcagaattggttagggagtataataacaggtccgctataggaaacactatagaagccttatttcaagggcctcctaaatttaggcctataaaaatt---agtcttgatgagaaacctgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgc-agagatcaaggatggataattcctgaagcgccaaccaacgtggagcggcatctcaatagggcggtgttagtgatgcaatccatcgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggttttcaaggtgcatattctggagcgcccaagcaaaccctcaagaaacctgtgctgagaacagccactgttcaaggacccagcttagattttgccctgtctctcctgcgacgcaacatcaggcaggtgcaaactgaccaagggcactttaccatgcttggggtgcgtgaccgccttgctatcttacctcgccactcacaaccagggaagaccatctgggttgagcacaagttggtcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacactagtaaccctagataccaatgagaagtttagggatgtcaccaagttcattccagagaatatcagtggagccagtgatgccacattagtgatcaacactgaacacatgccatcaatgttcgtcccggtaggagatgttgttcaatacgggttcctaaatctcagtggtaagccaacccacaggaccatgatgtacaatttccctacaaaggctggacagtgtggaggcgtggtaacatctgtcggtaaaatcattggcatccacattggaggcaatgggcgacaagggttttgcgctggcctgaagaggaattattttgcaagtgaacaaggtgagatccaatgggtgaaacctaacacggagaccggcagattaaacatcaatggtccaacacgcaccaagttagagcccagtgtgttccatgatgtgtttgagggtaacaaggagccagcagtcctaacaagcaaggatcccagattggaggttgactttgagcaagccctcttctccaagtatgtgggcaatgtcctccacgaacctgatgaatacgtgaaacaggcagccctccactacgcaaatcagctcaagcaattggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccacactagtgcagggtacccatacagtgctctgggcataaagaagagggacatactagatcctaccactagggacacaacaaaaatgaagttctacatggataagtatggcttggacttaccttactccacctacgttaaagatgaactaaggtccctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgactcagtgtacctcagaatgacttttggtcatctgtatgaagcattccatgcaaatccagggactgtgaccggatcagcagttgggtgcaatccggatgtgttttggagtaaactcccaattctactcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagtcccgtctggttcagggctttggagatggtcttacgagacattggctactcagaggaagcagtgtcactcatagaaggaataaatcatacccatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccgtcaggatgttctggcacctccattttcaactcgatgatcaacaacatcatcatcaggacgcttttaatcaaaacctttaaagggatagatctagacgagttgaatatggtggcctatggagatgatgtgctagctagttatcctttccccattgattgccttgagctagctaagactggtaaagaatatgggctgaccatgacacctgcggacaaatcaccctgcttcaatgaagtgacgtgggaaaacgccacctttctgaagagagggtttctaccagaccatcaattcccattcttaattcatcccataatgcccatgaaggagatccacgaatctatacgttggaccaaagatgcgtgcaatactcaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagtacaattagatcagtcccagttgggaaagcattggcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU578126.1_Coxsackievirus_A10_isolate_Heze/SD/CHN/2014_polyprotein_gene_complete_cds
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-ttacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccac-----taacacc--------------taaatcctttaat-acactgcactatattctgacgctgaacgcaagagaa-------tgggggctcaagtctcgacgcaaaaatccggcagtcatgagactggtaatgtagccactg-gaggatctacaataaacttcactaatatcaactattataaagattcttacgccgcgtcagctacccggcaagatttcacacaagatccaaagaaattcacacaaccagtgttagattctattagagaactatcagcccctttgaactccccttctgtggaggcttgtggctatagtgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggacaaaccaacccgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------actcgactggttggtattggaagttccctgatgtgctgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcaggtttctgtttgcatgtgcagtgtaatgctagtaaatttcaccagggggcccttcttgtggctgtgataccagaatttgtaattgctggcagaggatctaatacaaaaccaaatc---aagcgcc---caccaggttcaccacaactttccctggcaccaccggtgctacatttcatgatccatacgttttggattccggggtgccattgagtcaggctctaatatacccccatcagtggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgtcccgtttgactcagctatcaaccatagtaactttgggctaatagtgataccagttagtccgctgaagtattcgtccggggcaaccactgcaatcccaattactatcactatagcccccctgaattcagagttcggaggactgcgacaagccgtcagtcaaggtatcccagctgagctcaggcccgggaccaatcagttcctgaccacagatgatgacactgcagcgcctatcctcccaggattcacccccacacctacaattcatataccaggggaagtacactctttgctggagctatgtagggtagagactattttagaagtgaacaa----------------caccacagaagcaacagga------ctaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccaggccggattggaccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatcctttatggcaacaggcaagatgctggtggcctactctccgcctggaagtgctcaaccagccaacagagaaaccgccatgttgggcacgcatgtcatttgggactttggactacaatcatcagtctctttggtgataccgtggatcagtaacacacacttccgcactgctaagacaggtggaaattacgattactacacggcaggtgtagtgaccttatggtatcaaaccaattacgtggtcccaccagaaacccctggagaagcatatattattgcaatgggggcggcacaagacaatttcactttgaaaatttgcaaggacactgatgaagtgacacaacaggctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------ggggagcacagtgcgcagagctattagcggtgctacaaatgttgaat--------ccgcagccaacaccactcccagctcacaccgattagagactggacgcgtgccagcgctacaggctgcagagacgggtgccacttctaatgcctcagatgagaacatgattgagacccgttgtgtggttaacagaaatggggtgctggaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacagatggggggacgg----acaccactgggtatgctacatgggacatagacatcatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggtttaacgcagaattcacatttgtcacaacgactgagaatggaggggctcgcccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcggtccctttcatgtcaccagctagcgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatacggattgtgcccaaacaatatgatgggcacctttgcagtgagagttgttagtagggaggcaagccaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaaggccgatcaggtctcagccatacctgcttaaaaactttcccaattacgacagtag----caagattaccaacagtgcacgggaccgatccagtat---ca-------------------------------------------------------------------agcaggctaatatgggt--------aaatttgggcaacaatctggcgccatatacgttggtaattacagagtggtcaatagacacctggccacccacaatgactgggctaacctggtgtgggaagatagttctcgagacctacttgtttcgtctaccactgcccagggttgcgatacgattgcccgttgtgagtgtcagacaggggtatactactgcaactcaaggagaaaacattatccagtcagcttctctaaacctagcctcgtctttgtagaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggccactctgaacctggggactgcgggggtatcttgaggtgtcagcatggtgtgattggcatagtgtccactggtggcaacggtcttgtcggttttgctaacgtgagggaccttttgtggttggatgaagaagccatggaacagggagtgtctgactatatcaag-ggactcggtgacgcttttggcactggttttactgacgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttccgagggagcagtggagaagatcctgaagaacttggtgaaactcatatcagctttggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatattaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgccgcaaagggattggagtggatctccaacaaaattagcaaatttattgattggctcaaggaaaaggtcattccggccgctaaggaaaaagttgagtttcttaataacctcaagcaattgcct-ttgatggaaaaccaaattgctaacttagaacagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccaaccactctatgcaactgaagcgaggagagtgtatgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattattaggggctcaccaggaactggcaagtcactcgctacaggtataatagcaagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagatcattttgatggatacaagcaacaggtggtgacagtcatggatgatttgtgccagaacccagatggcaaagatatgtcattgttttgtcaaatggtatccactgttgattttatacccccaatggcttcactggaagagaaaggcgtatccttcacatccaaatttgtcattgcttcaactaatgctagcaacatcattgtccccacggtctcagactctgacgctattcgtaggagattttttatggattgtgacatcgaagtgactgactcttataagacagacttaggtcgcttggatgcaggaagggccgcaaagctctgctcagagaacaacactgctaattttaagaggtgcagtccgctagtgtgtggcaaagccatccaactgagagagaggaagtccaaggtcaggtatagcgtagacactgtggtatcagaattggttagggagtacaataacaggtctgctataggaaacactatagaagctttattccaagggcctcctaaatttaggcctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcaatactgt-agagatcaaggatggataattcctgaaacgccaaccaacgtggagcggcatctcaatagggcagtattagtgatgcagtccattgctactgtagtcgcagttgtatcccttgtttatgttatttataagctatttgctggtttccaaggcgcatattctggagcgcccaagcaaacccttaagaaacctgtgttgaggacagccactgttcaagggcccagtttagattttgctctatctctcctgcgacgcaacatcaggcaggtgcaaaccgaccaagggcacttcactatgcttggggtgcgtgaccgccttgctattttacctcgtcactcacaaccagggaagaccatctgggttgagcacaagttggtcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacactagtgaccctggataccaacgagaagtttagggatgttaccaagttcattccggagaatatcagtggagccagtgatgccacattagtaattaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatacggattcctaaatcttagcggtaagccgacccacaggaccatgatgtacaacttccctacaaaggctggacagtgtggaggtgtggtaacgtctgtcggtaaaatcattggcatccacattggaggcaacgggcgtcaagggttttgcgctggcctgaagaggagttactttgcaagtgaacaaggtgaaatccaatgggtgaaacctaacaaggagaccggcagattaaatatcaatggtccaacacgcaccaagttagagcccagtgtgttccatgatctgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattagaggttgactttgagcaagccctcttctccaagtatgtgggtaatgccctccacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaatcagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccatactagcgcggggtacccatacagcgctctgggcataaagaagagggacatactagatcctaccactagggacataacaaaaatgaagttctacatggataagtatggcttggatttaccttactccacctatgttaaagatgaacttaggcctctggataaaatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgattcagtgtacctcagaatgactttcggtcacttgtatgaagcattccatgcaaacccagggactgtgaccggatcagcagttgggtgcaatccggatgtgttctggagtaaactcccaatcctactcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaggcagtgtcactcatagaaggaataaatcatacccatcatgtgtatcggaacaaaacatattgtgttcttggtgggatgccgtcagggtgttctggcacttccattttcaactcgatgatcaacaacatcatcatcagaacgcttttaatcaaaacctttaaagggatagatctggacgagttgaatatggtggcctatggagatgatgtgctagctagttatcctttccctattgattgtcttgagctagctaagactggcaaagagtatgggctgaccatgacacctgcggacaaatcaccttgtttcaatgaagtgacgtgggaaaatgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcccacgatgcccatgaaagagattcacgaatctatacgctggaccaaagatgcgtgcaatacccaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaattagatcagtcccagttgggagagcattggcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289394.1_Coxsackievirus_A10_isolate_CV-A10/P1005/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-ttacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaagcca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccac-----taacacc--------------taaatcctttaat-acactgcactatattctgacgctgaacgcaagaaaa-------tgggggctcaagtctcgacgcaaaaatccggcagtcatgagactggtaatgtagccactg-gaggatctacaataaactttactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccaaagaaattcacacaaccagtgttagattctattagagaactatcagcccctttgaactccccttctgtggaggcttgtggctatagtgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggacaaaccaacccgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------actcgactggttggtattggaagttccctgatgtgctgaacaagacgggggtgtttggacagaatgcccagtttcattacttgtaccggtcaggtttctgcttgcatgtacagtgtaatgctagtaaatttcaccagggggcccttcttgtggctgtgataccagaatttgtaattgctggcagaggatccaatacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggtaccaccggtgctacatttcatgacccatacgttttggattccggggtgccattgagtcaggctctaatatacccccatcagtggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgtcccgtttgactcagctatcaaccatagtaactttgggctaatagtgataccagttagtccgctgaagtattcgtccggggcaaccactgcaatcccaattactatcactatagcccccctgaattcagagttcggaggactgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcctatcctcccaggattcacccccacacctacaattcatataccaggggaagtacactctttgctggagttatgtagggtagagactattttagaagtgaacaa----------------caccacagaagcaacagga------ctaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccaggccggattggaccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatcctttatggcaacaggcaagatgctggtggcctactctccacccggaagtgctcaaccagccaacagagaaaccgccatgttgggcacgcatgtcatttgggactttggactacaatcatcagtctctttggtgataccgtggatcagtaacacacacttccgcactgctaagacaggtgggaattacgattactacacggcaggcgtagtgaccttatggtatcaaaccaattacgtggtcccaccagaaacccctggagaggcatatattattgcaatgggggcggcacaagacaatttcactttgaaaatttgcaaggacactgatgaagtgacacaacaggctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------ggggagcacagcgcgcagagctattagcggtgctacaaatgttgaat--------ccgcagccaacaccactcccagctcacaccgattagagactggacgcgtgccagcgctacaggctgcagagacgggtgccacttctaatgcctctgatgagaacatgattgagacccgttgtgtggttaacagaaatggggtgctggaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacagatggggggacgg----acaccactgggtatgctacatgggacatagacatcatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggtttaacgcagaattcacatttgtcacaacgactgagaatggagaggctcgcccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcggtccctttcatgtcaccagctagcgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatacggattgtgcccaaacaatatgatgggcacctttgcagtgagagttgttagtagggaggcaagccaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaagaccgatcaggtctcagccatacctgcttaaaaacttccccaattacgacagtag----caggattaccaacagtgcacgggaccgatccagtat---ca-------------------------------------------------------------------agcaggctaatatgggt--------aaatttgggcaacaatctggcgccatatacgttggtaattacagagtggtcaatagacacctggccacccacaatgactgggctaacctggtgtgggaggatagttctcgagacctacttgtttcgtctaccactgcccagggttgcgatacgattgcccgttgtgagtgtcagacaggggtatactactgcaactcaaggagaaaacattatccagtcagcttctctaaacctagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcatcctcacttaatgctcgctgcaggccactctgaacctggggactgcgggggtatcttgaggtgtcagcatggtgtaattggcatagtgtccactggtggcaacggtcttgtcggttttgctaacgtgagggaccttttgtggttggatgaagaagccatggaacagggagtgtctgactatatcaag-ggactcggtgacgcttttggcattggtttcactgacgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttccgagggagcagtggagaagatcctgaagaacttggtgaaactcatatcagctttggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatattaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgctgcaaagggattggagtggatctccaacaaaattagcaaatttattgattggctcaaggaaaagatcattccggccgctaaggaaaaagttgagtttcttaataacctcaagcaattgcct-ttgatggaaaaccaaattgctaacttagaacagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccaaccactctatgcaactgaagcgaagagagtgtatgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattattaggggctcaccaggaactggcaagtcactcgctacaggtataatagcaagagccattgctgataaatatcactctagtgtgtactcccttccaccagacccagatcattttgatggatacaagcaacaggtggtgacagtcatggatgacttgtgccagaacccagatggcaaagatatgtcattgttttgtcaaatggtatccactgtcgattttatacccccaatggcttcactggaagagaaaggcgtatccttcacatccaaatttgtcattgcttcaactaatgctagcaacatcattgtccccacggtctcagactctgacgctattcgtaggagattttttatggattgtgacatcgaagtgactgactcttataagacagacttaggtcgcttagatgcaggaagggccgcaaagctctgctcagagaacaacactgctaatttcaagaggtgcagtccgctagtgtgcggtaaagccatccaactgagagagaggaagtccaaggtcaggtatagcgtagacactgtggtatcagaattggttagggagtacaataacaggtccgctataggaaacactatagaagctttattccaagggcctcctaaatttaggcctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgt-agagatcaaggatggataattcctgaaacgccaaccaacgtggagcggcatctcaatagggcagtattagtgatgcagtccattgctactgtagtcgcagttgtatctcttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcaaacccttaagaaacctgtgttgaggacagccactgttcaagggcccagtttagattttgctctgtctctcctgcgacgcaacatcaggcaggtgcaaactgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgccattttacctcgtcactcacaaccagggaagaccatctgggttgagcataagttggtcaatgtgcttgatgccgttgagctagtggatgaacaaggtgttaatttggagcttacactagtgaccctggataccaacgagaagtttagagatgttaccaagttcattccggagaatatcagtggagccagtgatgccacgttagtaatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatacgggttcctaaatcttagcggtaagccgacccacaggaccatgatgtacaacttccctacaaaggctggacagtgtgggggtgtggtaacgtctgtcggtaaaatcattggtatccacattggaggcaacgggcgtcaagggttttgcgctggcctgaagaggagttactttgcaagtgaacaaggtgaaatccaatgggtgaaacctaacaaggagaccggcaggttaaatatcaatggtccaacacgcaccaagttagagcccagtgtgttccatgatttgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattagaggttgactttgagcaagccctcttctccaagtatgtgggtaatgtcctccacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaatcagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccatactagcgcggggtacccatacagcgctctgggcataaagaagagggacatactagatcctaccactagggacataacaaaaatgaagttctacatggataagtatggcttggatttaccttactccacctacgttaaagatgaacttaggcctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgattcagtgtacctcagaatgacttttggccacctgtatgaagcattccatgcaaacccagggactgtgaccggatcagcagttgggtgcaacccggatgtgttttggagtaaactcccgatcctactcccaggttcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttgcgggacattggctattcagaggaggcagtgtcactcatagaaggaataaatcatacccatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccgtcaggatgttctggtacctccattttcaactcgatgatcaacaacatcatcatcaggacacttttaatcaaaacctttaaagggatagatctagacgagttgaatatggtggcttatggagatgatgtgctggctagttatcccttccccatcgattgccttgagctagctaagactggcaaggaatatgggctgaccatgacacctgcggacaaatcaccttgcttcaatgaagtgacgtgggaaaacgctacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcccacaatgcccatgaaagagatccacgaatccatacgctggaccaaagatgcgtgcaatactcaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaattagatcagtcccagttgggaaagcattagcaattccgaactttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289408.1_Coxsackievirus_A10_isolate_CV-A10/P935/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-ttacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattaag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccac-----taacacc--------------taaatcctttaat-acactgcactatattctgacgctgaacgcaagaaaa-------tgggggctcaagtctcgacgcaaaaatccggcagtcatgagactggtaatgtagccactg-gaggatctacaataaacttcaccaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccaaagaaattcacacaaccagtgttagattctattagagagctatcagcccctttgaactccccttctgtggaggcttgtggctatagtgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggacaaaccaacccgcccggatgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------actcgactggttggtattggaagttccctgatgtgctgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcaggtttctgcttgcatgtacagtgtaatgctagtaaatttctccagggggcccttcttgtggctgtgataccagaatttgtaattggtggcagaggatataatacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccgtggtaccaccggtgctacatttcatgatccatacgttttggattccggggtgccattgagtcaggctctaatatacccccatcagtggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgtcccgtttgactcagctatcaaccatagtaactttgggctaatagtgataccagttagtccgctgaagtattcgtccggggcaaccactgcaatcccaattactatcactatagcccccctgaattcagagttcggaggactgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcctatcctcccaggattcacccccacacctacaattcatataccaggggaagtacactctttgctggagttatgtagggtagagactattctagaagtgaacaa----------------caccacagaagcaacagga------ctaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgatccaggtcggattggaccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatcctttatggcaacaggcaagatgctggtggcctactctccgcctggaagtgctcaaccagccaacagagaaaccgccatgttgggcacgcatgtcatttgggactttggactacaatcatcagtctctttggtgataccgtggatcagtaacacacacttccgcactgctaagacaggtgggaattacgattactacacggcaggtgtagtaaccttatggtatcaaaccaattacgtggtcccaccagaaacccctggagaggcatatattattgcaatgggggcggcacaagacaatttcactttgaaaatttgcaaggacactgatgaagtgacacaacaggctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------ggggagcacagcgcgcagagctattagcggtgctacaaatgttgaat--------ccgcagccaacaccactcctagctcacaccgattagagactggacgcgtgccagcgctacaggctgcagagacgggtgccacttctaatgcctcagatgagaacatgattgagacccgttgtgtggttaacagaaatggggtgctggaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacagatggggggacgg----acaccactgggtatgctacatgggacatagacatcatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggtttaacgcagaattcacatttgtcacaacgactgagaatggagaggctcgcccgtacatgctgcaatacatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcagtccctttcatgtcaccagctagcgcgtatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatacggattgtgcccaaacaatatgatgggcacctttgcagtgagagttgttagtagggaggcaagccaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaaggccgatcaggtctcagccatacctgcttaaaaacttccccaattacgacagtag----caagattaccaacagtgcacgggaccgatccagtat---ca-------------------------------------------------------------------agcaggctaatatgggt--------aaatttgggcaacaatctggcgccatatacgttggtaattacagagtgatcaatagacacctggccacccacaatgactgggctaacctggtgtgggaagatagttctcgagacctacttgtttcgtctaccactgcccagggttgcgatacgattgcccgttgtgagtgtcagacaggggtatactactgcaactcaaggagaaaacattatccagtcagcttctctaaacctagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggccactctgaacctggggactgcgggggtatcttgaggtgtcagcatggtgtgataggcatagtgtccactggtggcaacggtcttgtcggttttgctaacgtgagggaccttttgtggttggatgaagaagccatggaacagggagtgtctgactatatcaag-ggactcggtgacgcttttggcattggttttactgacgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttccgagggagcagtggagaagattctgaagaacttggtgaaactcatatcagctttggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatattaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgctgcaaagggattggagtggatctccaacaaaattagcaaatttattgattggctcaaggaaaagatcattccggccgctaaggaaaaagttgagtttcttaataacctcaagcagttgcct-ttgatggaaaaccaaattgctaacttagaacagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccaaccactctatgcaactgaagcgaagagagtgtatgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattattaggggctcaccaggaactggcaagtcactcgctacaggtataatagcaagagccattgctgacaaataccactctagtgtgtactcccttccaccagacccagatcattttgatggatacaagcaacaggtggtgacagtcatggatgacttgtgccagaacccagatggcaaagatatgtcattgttttgtcaaatggtatccactgtcgattttatacccccaatggcttcactggaagagaaaggcgtatccttcacatccaaatttgtcattgcttcaactaatgctagcaacatcattgtccccacggtctcagactctgacgctattcgtaggagattttttatggattgtgacatcgaagtgactgactcttataagacagacttaggtcgcttagatgcaggaagggccgcaaagctctgctcagagaacaacactgctaatttcaagaggtgcagtccgctagtgtgcggtaaagccatccaactgagagagaggaagtccaaggtcaggtatagcgtagacactgtggtatcagaattggttagggagtacaataacaggtccgctataggaaacactatagaagctttattccaagggccccctaaatttaggcctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgt-agagatcaaggatggataattcctgaaacgccaaccaacgtggagcggcatctcaatagggcagtattagtgatgcagtccattgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcaaacccttaagaaacctgtgttgaggacagccactgttcaagggcccagtttagattttgccctgtctctcctgcgacgcaacatcaggcaggtgcaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctattttacctcgtcactcacaaccagggaagaccatctgggttgagcacaagttggtcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacactagtgaccctggataccaacgagaagtttagggatgttaccaagttcattccggagaatatcagtggagccagtgatgccacattagtaatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatacgggttcctaaatcttagcggtaagccgacccacaggaccatgatgtacaacttccctacaaaggctggacagtgtggaggtgtggtaacgtctgtcggtaaaatcattggcatccacattggaggcaacgggcgtcaagggttttgcgctggcctgaagaggggttactttgcaagtgaacaaggtgaaatccaatgggtgaaatctaacaaggagaccggcagattaaatatcaatggtccaacacgcaccaagttagagcccagtgtgttccatgatctgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattagaggttgactttgagcaagccctcttctccaagtatgtgggtaatgtcctccacgaacctgatgaatacgtgaagcaggcagccctccactacgcaaatcagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccatactagcgcggggtacccatacagcgctctgggcataaagaagagggacatactagatcctaccactagggacataacaaaaatgaagttctacatggataagtatggtttggatttaccttactccacctacgttaaagatgaacttaggcctctggataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgattcagtgtacctcagaatgacttttggtcacctgtatgaaacattccatgcaaacccagggactgtgaccggatcagcagttgggtgcaatccggatgtgttctggagcaaactcccaatcctactcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaggcagtgtcactcatagaaggaataaatcatacccatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccgtcaggatgttctggtacttccattttcaactcgatgattaacaacatcatcatcagaacgcttttaattaaaacctttaaagggatagatctggacgagttgaatatggtggcctatggagatgatgtgctagctagttatcctttccctattgattgtcttgagctagctaagactggcaaagagtatgggctgaccatgacacctgcggacaaatcatcttgtttcaatgaggtgacgtgggaaaatgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcccacgatgcccatgaaagagattcacgaatctatacgctggaccaaagatgcgtgcaatacccaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaattagatcagtcccagttgggagagcattggcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttgcagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289396.1_Coxsackievirus_A10_isolate_CV-A10/P448/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccactcaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----gatct-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-ttgcgtggtcgaaggagaaaacgttcgttatccggccaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaacca-gaggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattaag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacatcccac-----taacacc--------------taaatcctttaat-acactgcactatattctgacgctgaacgcaagaaaa-------tgggggctcaagtctcgacgcaaaaatccggcagtcatgagactggtaatgtagccactg-gaggatctacaataaacttcactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccaaagaaattcacacaaccagtgttagattctattagagaactatcagcccctttgaactccccttctgtggaggcttgtggctatagtgatagggtcgcccagctcactgttgggaactcttccattactactcaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggacaaaccaacccgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------actcaactggttggtattggaagttccctgatgtgctgaacaagacgggggtgtttggacagaatgctcagtttcattacttgtaccggtcaggtttctgcttgcatgtacagtgtaatgctagtaaatttcaccagggggcccttcttgtggctgtgataccagaatttgtgattgctggcagaggatctaatacaaaaccaaatg---aagcgccccacccagggtttaccacaactttccctggtaccaccggtgctacatttcatgatccatacgttttggattccggggtgccattgagtcaggctctaatatacccccatcagtggatcaatctccgcactaacaactgtgcaactgttatagttccatacattaatgccgtcccctttgactcagctatcaaccatagtaactttgggctaatagtgataccagttagtccgctgaagtattcgtccggggcaaccactgcaatcccaattactatcactatagcccccctgaattcagagtttggaggactgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcctatcctcccaggattcacccccacacctacaatttatataccaggggaagtacactctttgctggagttatgtagggtagagactattttagaagtgaacaa----------------caccacagaagcaacagga------ctaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgacccaggccggattggaccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatcctttatggcaacaggcaagatgctggtggcctactctccgcccggaagtgctcaaccagccaacagagaaaccgccatgttgggcacgcatgtcatttgggactttggactacaatcatcagtctctttggtgataccgtggatcagtaacacgcacttccgcactgctaagacaggtgggaattacgattactacacggcaggtgtagtgaccttatggtatcaaaccaattacgtggttccaccagaaacccctggagaggcatatattattgcaatgggggcggcacaagacaatttcactttgaaaatctgcaaggacactgatgaagtgacacaacaggctgtgttgcaaggtgaccct--------gtggaggatataatcc---acgacgctct--------------------------ggggagcacagcgcgtagagctattagcggtgctacaaatgttgaat--------ccgcagccaacaccactcccagctcacaccgattagagactggacgcgtgccagcgctacaggctgcagagacgggtgccacttctaatgcctcagatgagaacatgattgagacccgttgtgtggttaacagaaatggggtgctggaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacagatggggggacgg----acaccactgggtatgctacatgggacatagacatcatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggtttaacgcagaattcacgtttgtcacaacgactgagaatggagaggctcgcccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgacccccctgcacaggtctcggtccctttcatgtcaccagctagcgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatacggattgtgcccaaacaatatgatgggcacctttgcagtgagagttgttagcagggaggcaagccaactaaaactacagactagagtgtacatgaagcttaagcatgtgagggcctgggtcccaaggccgatcaggtctcagccatacctgcttaaaaacttccccaattacgacagtag----caagattaccaacagtgcacgggaccgatccagtat---ca-------------------------------------------------------------------agcaggctaatatgggt--------aaatttgggcaacaatctggcgccatttatgtcggtaattacagagtggtcaatagacacctggccacctacaatgactgggctaacctggtgtgggaagatagttctcgagacctacttgtttcatctaccactgcccagggttgcgatacgattgcccgttgtgagtgtcagacaggggtatactactgcaactcaaggagaaaacattatccagtcagcttctctaaacctagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggccactccgaacctggggactgcgggggtatcttgaggtgtcagcatggtgtgattggcatagtgtccactggtggcaacggtcttgtcggttttgctaacgtgagggaccttttgtggttggatgaagaagccatggaacagggagtgtccgactatatcaag-ggactcggtgacgcttttggcgttggttttactgacgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttccgagggagcagtggagaagatcctgaagaacttggtgaaactcatatcagctttggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgctgcaaagggattggagtggatttccaacaaaattagcaaatttattgattggctcaaggaaaagatcattccggccgcaaaggaaaaagttgagtttcttaataacctcaagcaactgcct-ttgatggaaaaccaaattgctaacttagaacagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------ctattgtcgcaagttccaaccactctatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattattaggggctcaccaggaactggcaagtcactcgctacaggtataatagcaagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagatcactttgatggatacaagcaacaggtggtgacagtcatggatgacttgtgccagaacccagatggcaaagatatgtcattgttttgtcaaatggtatccactgtcgattttatacccccaatggcttcactggaagagaaaggcgtatccttcacatccaaatttgtcattgcttcaactaatgctagcaacatcattgtccccacggtctcagactctgacgctattcgtaggagattttttatggattgtgatatcgaagtgactgactcttataagacagacttaggtcgcttagatgcaggaagggccgcaaagctctgctcagagaacaacactgctaatttcaagaggtgcagtccgctagtgtgtggtaaagccatccaactgaaagagaggaagtccaaggtcaggtatagcgtagacactgtgatatcagaattggttagggagtataataacaggtccactataggaaacactatagaagctttattccaagggcctcctatatttaggcctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgt-agagatcaaggatggataattcctgaaacgccaaccaacgtggagcggcatctcaatagggcagtattagtgatgcagtccattgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcaaacccttaagaaacctgtgttgaggacagccactgttcaagggcccagcttagattttgctctgtctctcctgcgacgcaacatcaggcaggtgcaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctattttacctcgtcactcacaaccagggaagaccatctgggttgagcacaagctggtcaatgtacttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacactagtgaccctggataccaacgagaagtttagagatgttaccaagttcattccggagaatatcagtggagccagtgatgccacattagtaatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgttcaatacgggttcctaaatcttagcggtaagccgacccacaggaccatgatgtacaacttccctacaaaggctggacagtgtggaggtgtggtaacgtctgtcggtaagatcattggcatccacattggaggcaacgggcgtcaagggttttgcgctggcctgaagaggagttactttgcaagtgaacaaggtgaaatccaatgggtgaaacctaacaaggagaccggcagattaaatatcaatggtccaacacgcaccaagttagagcccagtgtgttccacgatttgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattagaggttgattttgagcaagccctcttctccaagtatgtgggtaatgtcctccacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaatcagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccacactagtgcaggatacccatacagtgctctgggcataaagaagagggacatactagatcctaccactagggacacaactaaaatgaagttctacatggataagtatggcttggacttaccttactccacctacgttaaagatgaactgaggtctctggataagatcaagaaagggaagtctcgcttgatagaagctagcagcctgaatgattcagtgtacctcagaatgacttttggccacctgtatgaagcgttccatgcaaacccagggactgtgaccggatcagcagttgggtgcaatccggatgtgttctggagcaaactcccaatcctactcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgtcactcatagaaggaataaatcatacccatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccgtcaggatgttctggcacttccattttcaactcgatgatcaacaacatcatcatcagaacgcttttaatcaaaacctttaaagggatagatctggacgagttgaatatggtggcctatggagatgatgtgctagctagttatcctttccctattgattgtcttgagctagctaagactggcaaagagtatgggctgaccatgacacctgcggacaaatcaccttgcttcaatgaagtgacgtgggaaaatgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcccacgatgcccatgaaagagattcacgaatctatacgctggaccaaagatgcgtgcaatacccaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaattagatcagtcccagttgggagagcattggcaatcccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttgcagttg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289409.1_Coxsackievirus_A10_isolate_CV-A10/P962/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgt-ttacgtggtcgaaggagaaaacgttcgttatccggccaactacttcgagaaacc-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaacca-gaggg-tagtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-ggatacattccac-----taacacc--------------taaatcctttaat-acactgcactatattctgacgctgaacgcaagaaaa-------tgggggctcaagtctcgacgcaaaaatccggcagtcatgagactggtaatgtagccactg-gaggatctacaataaacttcactaacatcaactattataaagattcttacgccgcgtcagctacccggcaagacttcacacaagatccaaagaaattcacacaaccagtgttagattctattagagaactatcagcccctttgaactccccttctgtggaggcttgtggctatagtgatagggtcgcccagctcactgttgggaactcctccattactacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagacgcaactgccgtggacaaaccaacccgcccggacgtgtctgtcaacaggttctacactttggactccaaaatgtggcaagaaa------------------actcgactggttggtattggaagttccctgatgtgctgaacaagacgggggtgtttggacagaatgcccagtttccttgcttgtaccggtcaagtttatacttgcatgtgcagtataatgctagtaaatttcaccagggggcccttcttgtggctgtgataccagaatttgtgattgctggcagaggatctaatacaaaaccaagtg---aagcgccccacccagggttttccacaactttccctggtaccaccggtgctacatttcatgatccatacgttttggattccggggtgccattgagtcaggctctaatatacccccatcagtggatcaatcttcgcactaacaactgtgcaactgttatagttccatacattaatgctgtcccgtttgactcagctatcaaccatagtaactttgggttaatagtgataccagttagtccggtgaagtattcatccggggcaaccagtgcaatcccaattactatcactatagcccccctgaattcagagttcggaggactgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcctatcctccccggattctcccccacacggacaattcatattccaggggaagtacactctttgctggagttatgtagggtagagactattttagaagtgaacaa----------------caccacagaagcaacagga------ctaacaaggctcttaataccagtgtcctcgcagaaca------aagccgatgagttgtgtgctgcgtttatggttgacccaggccggattggaccttggcaatctaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatcctttatggcaacaggcaagatgctggtggcctactctccgcccggaagtgctcaaccagccaacagggaaaccgccatgttgggcacgcatgtcatttgggactttggactacaatcatcagtctctttggtgataccgtggatcagtaacacacacttccgcactgctaagacaggtgggaattacgattactacacggcaggtgtagtgaccttatggtatcaaaccaattacgtggttccaccagaaacccctggagaggcatatattattgcaatgggggcggcacaagacaatttcactttgaaaatttgcaaggacactgatgaagtgacacaacaggctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------ggggagcacagcgcgcagagctattagcggtgctacaagtgttgaat--------ccgcagccaacaccactcccagctcacaccgattagagactggacgcgtgccagcgttacaggctgcagagacgggtgccacttctaacgcctcagatgagaacatgattgagacccgctgtgtggttaacagaaatggggtgctagaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacagatggggggacgg----acaccactgggtatgctacatgggacatagacatcatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggtttaacgcagaattcacatttgtcacaacgactgagaatggagaggctcgcccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacgggaagggatgcctttcaatggcaaacagcaactaacccatcagtcttcgtcaaactcactgaccctcctgcacaagtctcggtccctttcatgtcaccagctagcgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatacggattgtgcccaaacaatatgatgggcacctttgcagtgagagttgttagtagggaggcaagccaactaaaactacagactagagtgtacatgaagcttaagcatgtgaaggcctgggtcccaaggccgatcaggtctcagccatacctgcttaaaaacttccccaattacgacagtag----caagattaccaacagtgcacgagaccgatccagtat---ca-------------------------------------------------------------------agcacgctaatatgggt--------aaatttgggcaacaatctggcgccatttacgttggtaattacagagtggtcaatagacacctggccacccacaatgactgggctaacctggtgtgggaagatagttctcgagacctacttgtttcgtctaccactgcccagggttgcgatatgattgcccgttgtgagtgtcagacaggggtatactactgcaactcaaggagaaaacattatccagtcagcttctctaaacctagccttgttctcgtagaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggccactctgaacctggggactgtgggggtatcttgaggtgtcagcatggtgtgattggtatagtgtccactggtggcaacggtcttgtcggttttgctaacgtgagggaccttttgtggttggatgaagaagccatggaacaaggagtgtctgactatatcaag-ggactcggtgacgcttttggcattggttttactgacgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttccgagggagcagtggagaagatcctgaagaacttggtgaaactcatatcagctttggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcctatggcacagaagcagagtgcatcttggcttaagaagttcagtgatatggcgaacgctgcaaagggattggagtggatctccaacaaaattagcaaatttattgactggctcaaggaaaagatcattccggccgcaaaggaaaaagttgagtttcttaataacctcaagcaactgcct-ttgatggaaaaccaaattgctaacttagaacagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccaaccactctatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattattaggggctcaccaggaactggcaagtcactcgctacaggtataatagcaagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagaccactttgatggatacaagcaacaggtggtgacagtcatggatgacttgtgccagaacccagatggcaaagatatgtcattgttttgtcaaatggtatccactgttgattttatacccccaatggcttcactagaagagaaaggcgtatccttcacatccaaatttgtcattgcttcaactaatgctagcaacatcattgtccccacggtctcagactctgacgctattcgtaggagattttttatggattgcgatatcgaagtgactgactcttataagacagacttaggtcgcttagatgcaggaagggccgcaaagctctgctcagagaacaacactgctaatttcaagaggtgcagtccgctagtgtgcggtaaagccatccaactgagagagaggaagtctaaggtcaggtatagcgtagacactgtgatatcagaattggttagggagtataataacaggtccgctataggaaacactatagaagctttattccaagggcctcctaaatttaggcctataagaatt---ggtcttgacgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaagaggtgcggcagtactgt-agagatcaaggatggataattcctgaaacgccaaccaacgtggagcggcatctcaatagggcagtattagtgatgcagtccattgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggtttccaaggcgcatattctggagcgcccaagcaaactcttaagaaacctgtgttgaggacagccactgttcaagggcccagtttagattttgctctgtccctcctgcgacgcaacatcaggcaggtgcaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctattttacctcgtcactcacaaccagggaagaccatctgggttgagcacaagctggtcaatgtgcttgatgctgttgagctagtggatgaacaaggtgttaatttggagcttacactagtgaccctggataccaacgagaagtttagagatgttaccaagttcattccggagaatatcagtggagccagtgatgccacattagtaatcaatactgaacacatgccatcaatgtttgtcccggtaggggatgttgttcaatacgggttcctaaatcttagcggtaagccgacccacaggaccatgatgtacaacttccctacaaaggctggacagtgtggaggtgtggtaacgtctgtcggtaagatcattggcatccacattggaggcaacgggcgtcaagggttttgcgctggcctgaagaggagttactttgcaagtgagcaaggtgaaatccaatgggtgaagcctaacaaggagaccggcagattaaatatcaatggtccaacacgcaccaagttagagcccagtgtgttccatgatctgtttgagggcaacaaggagccagcagtcctaacaagcaaggatcccagattagaggttgactttgagcaagccctcttctccaagtatgtgggtaatgtcctccacgaacctgatgaatatgtgaagcaggcagccctccactacgcaaatcagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggcacagagaacctggaagcaattgacctccacactagcgcggggtacccatacagcgctctgggcataaagaagagggacatactagatcctaccactagggacataacaaaaatgaagttctacatggataagtatggcttggatttaccttactccacctacgttaaagatgaacttagacctctagataagatcaagaaagggaagtcccgcttgatagaagctagcagcctgaatgattcagtgtacctcagaatgacttttggccacctgtatgaagcattccacgcaaacccagggactgtgaccggatcagcagttgggtgcaatccggatgtgttctggagcaaactcccaatcctactcccaggctcgctatttgcctttgactattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgtcactcatagaaggaataaatcatacccatcatgtgtatcggaacaaaacatattgtgtccttggtgggatgccgtcaggatgttctggtacttccattttcaactcgatgatcaacaacatcatcatcagaacgcttttaatcaaaacctttaaagggatagatctggacgagttgaatatggtggcctatggagatgatgtgctagctagttatcctttccctattgattgtcttgagctagctaagactggcaaagagtatgggctgaccatgacacctgcggacaagtcaccttgcttcaatgaagtgacgtgggaaaatgtcacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcccacgatgcccatgaaagagattcacgaatctatacgctggaccaaagatgcgtgcaatacccaagaccatgtgcgctctctgtgtttgttagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaattagatcagtcccagttgggagagcattagcaattccgaattttgagaatttgagaagaaattggctcgaactatttt--ag-atttacagtcg-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ728262.1_Human_coxsackievirus_A10_strain_CVA10/SD/CHN/09_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-tacccccggactgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacctcgagaaacc-tagtaacgccattgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccttcaaacca-gaagg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tctt---attctcataatggctgcttatggtgacaatcgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttatt-ggatacattccat-----taacact--------------taaatccttcaat-acattgcactatattctaacactgaacgcaagaaaa-------tgggagctcaagtctcgacgcaaaaatccggcagtcatgagactggtaacgtagccactg-gaggatctacaataaacttcactaacatcaactattataaggattcttacgccgcgtcagctacccggcaagatttcacacaagatccaaagaaattcacacaaccggtgttagattctattagagaactatcagctcctttgaactccccttctgtggaagcttgtggctatagtgatagggtcgcccagctcactgttgggaattcctccattactacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagatgcaactgccgtggataaaccaactcgcccggacgtgtctgtcaacaggttctatactttggactccaaaatgtggcaagaga------------------actcgactggttggtattggaagttccctgacgtgctgaacaagacgggggtgttcgggcagaatgcccagtttcattacttataccggtcaggtttctgcttgcatgtacagtgtaatgctagtaaatttcaccagggagcccttcttgtggctgtgataccagaatttgtgattgccggcagaggatctaacacaaaaccaaacg---aagcgccccatccagggtttaccacaactttccctggtaccaccggtgctacatttcatgatccatatgttctggattccggggtaccattgagtcaggccctaatatacccccatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaatgctgttccgtttgactcagccatcaaccatagtaattttgggctaatagtaataccagttagtccgttgaagtattcgtctggggcaaccactgcaatcccaatcaccatcactatagcccccctgaattcagagttcggaggactgcgacaagccgtcagtcaaggcatcccagctgagctcaggcccgggactaatcagttcctgaccacagatgatgacactgcagcgcctatcctcccaggatttacccccacacccacaattcatataccaggggaggtgcactctttgttggagttgtgtagggtggagactattttggaagtgaataa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcgcagaata------aagccgatgaattgtgtgctgcgtttatggttgatccaggccggataggaccttggcaatccaccttagttggacagatttgccggtattacacacaatggtctgggtctttgaaggtgacctttatgttcacaggatcctttatggctacaggcaagatgctggtggcctactccccacccggaagcgctcaaccagctaacagggaaaccgccatgctgggcacgcacgtcatttgggactttggactacaatcgtcagtctctttggtgataccgtggatcagtaacactcacttccgcactgccaagacaggtgggaattacgattactacacggcaggtgtagtgaccttatggtatcaaactaattacgtggtcccgccagaaacacctggagaggcatatattattgcaatgggggcggcacaggacaacttcactttgaaaatttgcaaggatactgatgaggtgacgcaacaggctgtgttgcaaggtgatcct--------gtggaggatataatcc---atgacgctct--------------------------gggaagcacagcgcgcagagctattagcagtgctacaaatgttgaat--------ccgcagccaacaccactcccagttcacaccgattagagactggacgcgtaccagcgctacaggctgcagagacgggtgccacttctaatgccacagatgagaacatgattgagacccgttgtgtggttaacagaaatggggtgttggaaaccactatcaaccatttcttctcccgctctggattagtgggagtagttaacctcacagatggggggacgg----acaccactgggtatgccacatgggacatagacattatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagagttcacatttgtcacaacgactgagaatggagaggcccgtccgtacatgctgcaatacatgtatgtgccccctggcgcccccaaaccgacggggagggatgcctttcaatggcaaacagcaactaacccatcagtctttgtcaaactcactgacccacctgcacaagtctcagttcctttcatgtcaccagctagcgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatacggattgtgcccaaacaacatgatgggcacttttgcagtgagagttgttagtaggaaggcaagccaactaaaactacagactagagtatacatgaagcttaagcatgtgagggcctgggtcccgagaccgatcaggtctcagccatacttactcaaaaacttccccaattatgacagtag----caaaattaccaacagtgcacgagaccgatccagtat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaatttggacagcaatctggcgccatctacgttggtaattacagagtggtcaataggcacctggctacccataatgactgggccaacctggtgtgggaagatagttcacgagacctgcttgtttcgtccaccactgcccagggttgcgatacgattgcccgttgtgagtgtcagacaggggtgtactattgcaactcaaggaggaaacactatccagtcagcttctctaaacctagccttgttttcgtagaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggtcactctgaacctggagattgcgggggtatcttgaggtgtcagcatggtgtggttggcatagtgtccactggtggcaacggtcttgtcggttttgccaacgtgagggatctcttgtggttggatgaagaagccatggaacagggagtgtctgactatatcaag-ggactcggcgacgcttttggtactggttttactgacgcagtgtctagggaagtggaggctttgaaaaatcacctgattggttccgagggagcggtggagaagatcctgaagagcttggtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcacccttaccgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcccatggcacagaagcagagtgcatcttggcttaagaagttcaacgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaatttattgattggctcaaggaaaagatcattccggccgcaagggaaaaagttgagtttcttaataacctcaagcaactgcct-ttgatagaaaaccaaattgctaacttagaacaatctgctgctgcgcaagaggaccttgaagccatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctatgcaactgaagcgaagagagtgtatgccttagaaaagagaataaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattattaggggctcaccaggaactggcaagtcactcgccacaggtataatagcaagagccattgctgacaaataccactctagtgtgtactcccttccaccagacccagaccactttgatggatacaagcaacaggtggtgacagtcatggatgatttgtgtcaaaacccagatggcaaagacatgtcattgttttgtcaaatggtatccacagtcgattttatacccccaatggcttcactggaagagaaaggcgtatcattcacatctaaatttgttattgcttcaactaatgctagtaacatcatagtccccacggtctcagactctgacgctattcgtaggagatttttcatggattgtgatatcgaagtgactgactcttacaagacagacttaggccgcttagatgcaggtagggccgcaaagctctgctcagagaacaacactgctaatttcaagaggtgtagcccgctagtgtgcggcaaagccattcaactgagagataggaagtccaaagtcagatatagcgtagacactgtggtatcagaattggtcagggagtataacaacaggtccgctatagggaacactatagaagctttgtttcaagggcctcctaaatttaggcctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgcttgctagtgttgacagtgaggaggtgcggcagtactgc-agagaccaaggatggataattcctgaaacaccaaccaacgtggagcggcacctcaacagggcagtattagtgatgcaatccatcgctactgtagtcgcagttgtatcccttgtttatgttatctacaagttatttgctggtttccaaggcgcatattctggagcgcccaagcaagccctcaagaaacctgtgttgaggacagccactgttcaagggcctagcttagattttgccctgtctctcctgcgacgtaacatcaggcaggtgcaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctatcttacctcgtcactcacaaccagggaagaccatctgggttgagcacaagttggtcaatgtgcttgatgctgttgaactagtggatgaacaaggtgttaatttggagctcacactagtaaccctagataccaatgagaagtttagagatatcaccaagttcattccagagaatatcagtggagccagtgatgccacattagtaatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgtccaatacgggttcctaaatcttagtggtaagccaacccacaggaccatgatgtacaatttccctacaaaggctggacagtgtggaggcgtggtaacatctgtcggtaaaatcattggcatccacattggaggcaatgggcgacaagggttttgcgctggcctgaagaggagttattttgcaagtgaacaaggtgagatccaatgggtgaaacctaacaaggagaccggcagactaaatatcaatggcccaacacgcaccaagttagagcctagtgtgttccatgatgtgtttgagggcaacaaggagccagcagttctaacaagcaaggatcccagattagaggttgactttgagcaagccctcttctccaagtatgtgggcaatgttctccacgaacctgatgaatatgtgaaacaggcagccctccactacgcaaatcagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggtacagagaacttggaagcaattgacctccacactagcgcagggtacccatacagtgctctgggcataaagaagagggacatactagatcctaccaccagggacataacaaaaatgaagttctacatggataagtatggcttggacttaccttactccacctacataaaagatgaacttaggtctctggacaagatcaagaaagggaagtctcgcttgatagaagctagcagcctaaatgactcagtgtacctcagaatgacttttggccacctgtatgaagtgttccatgcaaatccagggactgtgacaggatcagcagttgggtgcaatccggatgtgttttggagtaaactcccaatcctgctcccaggttcgctgtttgcctttgattattcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttacgggacattggctactcagaggaagcagtgtcactcatagaaggaataaatcacacccatcacgtgtatcggaacaaaacatattgtgtccttggtgggatgccgtcagggtgttctggcacctccattttcaactcaatgatcaacaacatcatcatcaggactctcttaatcaaaacctttaaagggatagatttagacgagctgaatatggtggcttatggggatgatgtgctagctagttatcctttccccattgattgccttgagttagctaagactggcaaagaatatgggctgaccatgacacctgcggacaaatcaccttgcttcaatgaagtgacgtgggagaacgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcccacaatgcccatgaaagagatccacgaatccatacgctggaccaaagacgcgtgcaatacccaagaccatgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaattagatcagtcccagttggaaaagcattggcaattccgaatttcgagaacctgagaagaaattggctcgaactatttt--ag-acttacagtta-------------------------agaa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taaca-g-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617116.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA10_CF203060_FRA_2010
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactccgattctgcggaatccttgtgcgcct-g-ttttata-----accct---c---ccccga-----aactt-gcaacttagaagt------------tatgcacattact-gatcaa-cagcaggcgtggcgcaccagccatgtcttga-tcaagcacttctg-tatccccggaccgagtatcaatagactgc-tcacgtggtcgaaggagaaaacgttcgttatccggctaactacttcgagaaact-tagtaacaccattgaaactgcggggtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgtcctcaaacca-gagga-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttataatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtt-gggtacattccat-----tgacact--------------taaatccttcaat-acattgcactatattctaacactgaacgcaagaaaa-------tgggagctcaagtctcgacgcaaaaatccggcagtcatgagactagtaacgtagccactg-gaggatctacaataaatttcactaacatcaactattataaggattcttacgctgcgtcagctacccgacaagatttcacacaagatccgaagaaattcacacaaccagtgttagattctattagggaactatcagctcctttgaactccccttctgtggaagcctgtggctatagtgatagggtcgctcagctcactgttgggaactcctccattaccacccaagaggctgctaatattgtattagcttatggagagtggcctgagtactgccctgacacagatgcaaccgccgtggataaaccaacccgcccggacgtgtctgtcaacagattctacactttggattccaagatgtggcaagaga------------------actcgactggttggtattggaagttccctgatgtgctgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcaggtttctgcttgcacgtacagtgtaatgctagtaaatttcaccagggggcccttcttgtggctgtgataccagaatttgtgattgctggcagaggatctaacacaaaaccaaatg---aagcgccccatccaggatttaccacaactttccctggtaccaccggcgctacatttcatgatccatacgttctggactctggagtgccattgagtcagctcttaatatacccccatcaatggatcaaccttcgcactaacaactgtgcaactgctatagttccatacatcaatgctgtcccgtttgactctgccattaaccatagtaattttgggctaatagtaataccagttagtccgctgaagtattcatctggggcgaccactgcaatcccaatcaccatcactatagcccccctgaattcagagttcggagggctgcgacagcccgtcagccaaggtatcctagctgagctaagccccgggactaatcagttcctaaccacagatcatgacactgcagcccccacccacccaggatacacccccacacccacaattcatataccaggggaggtacactctttgttggagttgtgtagggtggaaactattttggaggtgaacaa----------------taccacagaagcaacaggg------ttaacaaggcttttaataccagtgtcctcacagaata------aagctgatgagttgtgtgctgcgtttatggttgatccaggccggataggaccttggcaatccaccttagttggacaaatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacagggtcctttatggcaacaggcaagatgctggtggcctactccccacccggaagcgctcagccagtcaacagggaaaccgctatgctgggcacgcacgttatttgggactttggactacaatcgtcagtctctttggtgataccgtggatcagtaacactcacttccgcactgccaagacaggtgggaattacgattactacacggcaggtgtagtgacattatggtatcaaaccaattacgtggtcccgccagaaactcctggagaggcatatatcattgcaatgggggcggcgcaggacaacttcactttaaaaatttgcaaggatactgatgaggtgacacaacaagctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgatgctct--------------------------gggaagtacagcgcgaagagctattagcagtgccacaaatgttgaat--------ccgcagccaacaccactcccagttcgcaccgcttagagactggacgcgtgccagcgctacaggctgcagagacgggtgccacttctaatgccacagatgagaacatgattgagacccgttgtgtggttaacagaaatggggtattggaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacagatggggggacgg----acaccactgggtatgccacttgggacatagacatcatgggtttcgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgtcacaacgactgagaatggagaggctcgtccgtacatgctgcaatatatgtatgtgccccctggcgcccccaaaccgacggggagggatgccttccaatggcaaacagcaaccaacccatcagtctttgtcaagctcactgaccctcctgcacaagtttcggttcccttcatgtcaccagccagcgcgtatcagtggttttatgatggttaccccaccttcggccagcacccggagacctcgaacacaacatacggattgtgcccaaacaacatgatgggcacttttgcagtgagagttgttagtagggaggcaagtcaactaaaactacagactagagtatacatgaagcttaagcatgtgagagcctgggtcccgagaccgattaggtctcagccatacctacttaaaaacttccccaattacgacagtag----caaaattaccaacagtgcacgggaccgatccagcat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaatttggacaacaatctggcgccatctacgttggcaattacagagtggtcaatagacacctggccacccacaatgactgggccaacctggtgtgggaagatagttcacgggacctacttgtttcgtctaccactgcccagggttgcgatacaattgcccgctgtgagtgtcagacaggggtatactattgcaactcaagaaggaaacattatccagttagtttctctaaacccagcctcgtcttcgtagaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgaaggtcactctgaacctggggattgcgggggcattttgaggtgtcagcatggtgtggttggcatagtgtccactggtggcagcggtcttgtcggtttcgctaacgtgagggacctcttgtggttggatgaagaagctatggaacagggagtgtctgattatatcaag-ggactcggcgatgcttttggcactggttttactgacgcagtgtccagagaagtggaggctctaaaaaatcacctgatcggttccgagggagcggtggagaagatcctgaagaacttggtgaaactcatatcagctctggtcatagttatcagaagtgactatgacatggtcacccttactgcaactctagctctgattgggtgtcacgggagcccatgggcgtggatcaaagcaaaaacggcgtccatcttaggtattcccatggcacagaagcagagtgcatcttggcttaagaagtttaacgatatggcgaacgctgcaaaggggttggagtggatctccaataagatcagcaaatttattgattggctcaaggaaaagattattccggccgcaaaggaaaaagttgagtttcttaataacctcaagcaactgcct-ttgatagaaaaccaaattgctaacttagaacagtctgctgcttcacaagaagaccttgaaatcatgtttggtaatgtgtcatacctagctca---------cttttgccgcaagttccaaccactctatgcaactgaggcgaagagagtgtacgccttagagaagagaatgaataattacatgcaattcaagagcaaacaccgtattgaacctgtatgtttaatcattaggggctcaccaggaactggcaagtcactcgccacaggtataatagcaagagccattgctgacaaatatcactctagtgtgtactcccttccaccagacccagaccactttgatggatataaacaacaggtggtgacagtcatggatgatttgtgtcaaaacccagatggtaaagatatgtcattgttttgtcaaatggtatccacagttgattttatacccccaatggcttcgctggaagagaaaggcgtatccttcacatctaaatttgttattgcttcaactaatgccagcaatattattgtccccacggtctcagactctgacgccattcgtaggagatttttcatggattgtgatatcgaagtgactgactcttataggacagacttgggccgcttagatgcaggtagggccgcaaagctctgctcagagaacaacactgccaattttaagaggtgtagcccactggtgtgcggtaaagccatccaactgagagataggaagtccaaagtcaggtatagtgtagacactgtggtatcagaattgatcagggagtataacaacaggtccgctataggaaacacaatagaagctttgtttcaagggcctcctaaatttaggcctataagaatt---agtcttgatgagaaacccgctccagatgctattagtgacctgctcgctagtgttgacagtgaggaggtgcggcagtactgc-agagaccaaggatggataattcctgaaacgccaaccaacgtggagcggcacctcaatagggcagtattagtgatgcaatccatcgccactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggcttccaaggcgcatactctggagcgcccaaacaaactctcaagaaacctgtgttgaggacagctactgttcaagggcctagcttagattttgccctgtctctcctgcgacgtaacatcaggcaggtgcaaaccgatcaaggacacttcaccatgcttggagtgcgtgaccgccttgctatcttacctcgtcactcacaaccagggaagactatttgggttgagcacaagttgatcaatgtgctagatgctgttgagctagtggatgaacaaggtgttaacttggaactaacattagtaaccttagataccaatgagaagtttagagacgtcaccaagttcattccagagaatatcagtggagctagtgatgccacattagtaatcaacactgaacacatgccatcaatgtttgtcccggtaggagatgttgtgcaatacgggtttctaaatcttagtggtaagccaacccacaggaccatgatgtacaacttccctacaaaggctgggcagtgtggaggcgtggtaacatctgtcggtaaaatcattggcatccacattggaggcaatgggcgacaagggttttgcgctggtctgaagaggagttattttgcaagtgaacagggcgagattcaatgggtgaaacctaacaaggagaccggcagactaaatatcaatggcccaacacgcaccaagttagagcccagcgtgttccacgatgtgtttgagggcaataaggagccagcagtcctaacaagtaaggatcccagattagaggttgactttgagcaagccctcttctctaagtatgtgggcaatgttctccacgaacctgacgaatatgtgaagcaggcagccctccactacgcaaatcagctcaaacaactggacataaacaccgataaaatgagcatggaggaagcgtgctatggcacagagaacttggaagctattgacctccacactagcgcagggtacccatacagtgctctgggcataaagaagagggacatactagatcctaccaccagggacataacaaaaatgaagttctacatggataagtatggcttggacttaccttactccacctacgtaaaagatgaacttaggtctctggataagatcaagaaagggaagtctcgcttgatagaagctagtagcctgaatgactcagtgtatctcagaatgacctttggccatctgtatgaagcatttcatgcaaatccagggactgtaacaggatcagcagttgggtgcaatccggacgtgttttggagcaaactcccaatcctactcccaggctcgctgtttgcctttgactactcaggctatgatgctagtcttagccccgtctggttcagggctttggagatggtcttgcgggacattggttactcagaggaagcagtgtcactcatagaaggaataaaccatacacatcatgtgtaccggaacaaaacatactgtgtccttggtgggatgccgtcaggatgctctggcacctccattttcaactcgatgatcaacaacatcatcatcagaactctcttaatcaaaacttttaaagggatagatctagacgagttgaatatggtggcttatggagatgatgtgctagctagttaccctttccccattgattgtattgagctagctaagactggcaaagagtatgggctgactatgacacctgcggacaaatcaccttgcttcaatgaagtgacatgggaaaacgccacctttctgaagagagggtttctaccagaccatcaattcccattcttgattcatcccacaatgcccatgagagagatccacgaatccatacgttggactaaagatgcgcgcaatacccaagaccacgtgcgctctctgtgtttattagcttggcacaatggtaaggatgaatatgaaaaatttgtgagcacaatcagatcagtcccagttggaaaagcattggcaattccgaattttgagaacttgagaagaaattggctcgaattatttt--ag-acttacagtta-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttagt-g-actg--------gtggggggaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430803.1_Coxsackievirus_A10_strain_CVA10/Homo_sapiens/VNM/5.1/2014_polyprotein_gene_complete_cds
------------------------------------------------------------------------------------------------ctttgtgcgcct-g-ttttatg-----accct--cc---ccccga-----aactt-gtaacttagaagt------------tatgtacattacc-gatcaa-tagcaggcgtggcgcaccagccatgtcttga-tcaagtacttctg-tacccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtaacaccattgaaactgcggagtgtttcgctcagca--ttc-ccccc---atgtagatcaggtcgatgagtcactgct-taccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgtcctcaaacca-gaggg-tggtgcgtcgtaatgggtaactctgcagc-gaaccgactactttgggtgtccgtgtttc---tttt---gttcttataatggctgcttatggtgacaatcgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtc-ggatacatcccct-----taacacc--------------taaatccctcaac-acattgcattatattttaacattgaacgcgagaaaa-------tgggtgctcaagtctcgacacaaaagtccggcagtcatgagactggcaatgtagccactg-gaggatctacaataaacttcactaacatcaactattataaggattcttacgccgcgtcagctacccggcaagatttcacgcaagacccaaagaaatttacacagccagtgttagattccattaaagaattatcagctcctttgaactccccttctgtggaagcttgtggctatagtgacagggtcgcccagcttaccgttgggaactcctccattaccacccaagaggctgccaatattgtgttggcttatggagagtggcctgagtactgccctgatacagatgcaactgccgtggataaaccaactcgcccggatgtgtccgttaacaggttctacactttggactccaaaatgtggcaagaga------------------actcgactggttggtattggaagttccccgacgtgttgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcaggcttctgtttacatgtacagtgtaatgctagtaagttccaccagggggcccttcttgtggctgtgataccggaatttgtgattgctggcagagggtctaacacaaaaccaaatg---aagcgcctcatccagggtttactacaactttccccggtaccaccggtgctacatttcatgatccatatgttctggattccggggtgccactgagccaggctctaatataccctcatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaacgctgttccgtttgactcagccatcaatcatagtaattttggactgatagtaataccagttagtccgctgaagtattcgtctggggcaaccactgcaatcccaattaccatcactatagcccctctgaactcagagttcggaggtctgcgacaagctgtcagccaaggcatcccagctgagctcaggcccgggactaatcaattcctgactacagatgatgatactgcagcgcctatcctcccgggattcactcccacgcctataattcatataccaggggaggtgcactctttgctggagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcacagaata------aagctgatgagttgtgtgccgcgtttatggttgatccaggtcggataggaccttggcaatccaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatccttcatggcgacaggcaagatgctagtggcctactccccgcccggaagcgctcaaccagccaacagggagaccgccatgctgggcacgcacgtcatttgggactttggactacaatcatcagtctctttggtgataccgtggatcagtaacacccattttcgcactgccaagacaggtgggaattacgattactacacggcaggtgtagtgaccttatggtaccaaaccaattacgtggtcccgccagaaacacctggagaggcatatatcattgcaatgggggcggcgcaggacaacttcactttgaaaatttgcaaggatactgatgaggtaacacaacaagctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------ggggagtacagcgcgcagagctattagcagtgctacaaatgttgaat--------ccgcagccaacaccactcccagttcacaccgattagagactgggcgtgtgccagcactacaggctgcagagacaggtgccacttccaatgccacagatgagaacatgattgagacccgttgtgtggttaacagaaatggggtgttagaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacagatggggggacaa----acaccactgggtatgccacttgggacatagacattatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgttacaacgactgagaatggagaagctcgtccgtacatgctgcaatatatgtatgtgccccctggtgcccccaagccgacgggaagagatgcctttcaatggcaaacagcaaccaacccgtcagtctttgtcaaactcactgaccctcctgcacaggtctcggttcccttcatgtcaccagccagcgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatatggattgtgcccaaacaacatgatgggcacctttgctgtgagagttgtcagtagggaggcaagccaactaaaattacaaactagagtatacatgaagcttaagcatgtgagagcctgggtcccgagaccggttaggtctcaaccatacttactcaaaaactttcccaattacgatagtag----caaaattgccaacagtgcacgggaccgatccagtat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaattcggacaacaatctggcgccatctacgttggtaattacagagtggtcaatagacacctggccacccacaatgactgggccaacctggtgtgggaagacagttcacgagacctgcttgtttcgtctaccactgcccagggttgcgacacaattgcccgttgtgagtgtcagacaggggtgtactactgcaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgttttcgtggaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggtcactctgaacctggggattgcgggggtatcttgaggtgtcagcatggtgtggttggcatagtgtccactggtggcaatggccttgtcggttttgctaatgtgagggatctcttgtggttggatgaagaagccatggagcagggagtgtctgactatatcaag-ggactcggcgacgcttttggtactggctttactgacgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttccgacggagcggtggagaagatcctgaagaacttggtgaaactcatatcagctctggtcatagttattagaagtgattatgacatggtcacccttactgcaactctagctcttattgggtgtcacgggagcccatgggcgtggatcaaatcaaagacggcgtccatcttaggtattcccatggctcagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaattcattgactggctcaaggagaagatcattccggctgcaaaggaaaaagttgagtttctcaataacctcaagcaattgccc-ttgatggaaaaccaaattgctaacttagagcagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctatgcaactgaagcgaagagagtgtacgccttagagaggagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattattaggggctcaccaggaactggtaagtcacttgccacaggcataatagcaagagccattgccgacaaatatcactctagtgtgtactcccttccaccagacccagaccactttgatggatataagcagcaggtggtgacagtcatggatgatttatgtcaaaacccagatggcaaagatatgtcattgttttgtcaaatggtatccacagttgactttatacccccaatggcctcactagaagagaaaggcgtatccttcacatctaaatttgttattgcttcaactaatgctagcaacatcattgtccccacagtctcagactctgacgctattcgaaggagatttttcatggactgtgatatcgaagtgactgactcttacaagacagacttaggccgcttggatgcaggtagggccgcaaagctctgttcagagaacaacactgccaatttcaagagatgcagcccgctagtgtgcggtaaagccatccagctgagagacaggaagtccaaagtcaggtatagcgtagacactgtggtgtcagagttgatcagggagtatagtaacaggtccgctataggaaacactatagaagctttatttcaaggacctcccaaatttaggcctataagaatt---agtcttgatgagaagcccgccccagatgccatcagtgacctgcttgctagtgttgatagtgaggaggtgcggcagtactgc-agagaccaaggatggataattcctgaagtgccaaccaacgtagagcggcacctcaacagggcagtattagtgatgcaatccatcgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggcttccaaggcgcatattctggagcgcccaagcaagccctcaagaaacctgtgttgagaacagccaccgttcaggggcctagcttagattttgccctgtctctcctgcgacgtaacatcaggcaggtgcaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctatcttacctcgccactcacaaccagggaagaccatctgggttgagcacaagttggtcaatgtacttgatgctgttgagctagtagatgaacagggtgttaatttagagcttacactagtaaccctagacactaatgagaagtttagagatgtcaccaagttcattccagagagtattagtggggccagtgatgccacattagtaatcaacactgaacacatgccgtcaatgtttgtcccggtaggagatgttgtccaatacgggtttttgaatcttagtggtaaaccaacccacaggactatgatgtacaatttccccacaaaggctggacagtgtggaggcgtggtaacatctgtcggcaaaatcattggcatccacattggaggcaatgggcgacaagggttctgcgctggcctgaagaggagttattttacaagtgcacaaggtgagatccaatggatgaaacccaataaggagaccggcagactaaatatcaatggcccaacgcgcaccaagttggagcccagtgtgttccatgatgtgtttgaaggcaataaggagccagcagtcctaacaagcaaggatcccagattagaggttgacttcgagcaagccctcttctccaaatacgtaggcaatgttctccacgaacctgatgaatatgtgaagcaggcggcccttcactacgcaaatcagctcaagcaactggacataaacaccaataagatgagcatggaggaagcgtgctatggtacagagaacttggaagcaattgacctccacactagtgcggggtacccatacagtgccctgggtataaagaagagagatatactagatcctaccaccagggacataacaaaaatgaagttctacatggacaagtacggtttggacttaccttactccacctacgtaaaagatgaacttaggtctctggataagatcaagaaagggaagtctcgcttgatagaggctagcagcttgaatgactcagtgtacctcagaatgacttttggccatctgtatgaaacattccatgcaaatccagggactgtgacaggatcagcagttgggtgcaatccggatgtgttttggagcaaactcccaatcttactcccaggttcattgtttgcctttgactattcaggctatgatgccagtcttagccccgtctggttcagggctttggagatagtcttacgggacattgggtattcagaggaagcagtgtcactcatagaaggaataaaccacacccaccatgtatatcggaacaaaacatattgtgtccttggtgggatgccatctggatgttctggcacctccattttcaactcgatgatcaacaacatcatcatcaggactcttttgatcaaaacctttaaagggatagatctagacgagttgaatatggtggcatatggagatgatgtgttagctagttatcctttccccattgattgctttgagctagccaagactggcaaagaatatgggctgaccatgacacctgcggacaaatcaccttgcttcaatgaagtgacgtgggagaacgccacctttctgaagagagggtttttaccagaccatcaattcccattcttgattcatcccacaatgcctatgaaagagatccacgaatccatacgttggaccaaagatgcgcgcaacacccaagaccatgtgcgctctctgtgtttattagcttggcacaacggtaaggatgaatatgaaaaatttgtgagctcaattagatcagtcccagttggaaaagcattggcaattccgaattttgagaacttgagaagaaattggctcgaattgtttt--ag-atttacagtt--------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-tg-taac--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430804.1_Coxsackievirus_A10_strain_CVA10/Homo_sapiens/VNM/5.2/2014_polyprotein_gene_complete_cds
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------caccagccatgtcttga-tcaagtacttctg-tacccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtaacaccattgaaactgcggagtgtttcgctcagca--ttc-ccccc---atgtagatcaggtcgatgagtcactgct-taccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgtcctcaaacca-gaggg-tggtgcgtcgtaatgggtaactctgcagc-gaaccgactactttgggtgtccgtgtttc---tttt---gttcttataatggctgcttatggtgacaatcgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtc-ggatacatcccct-----taacacc--------------taaatccctcaac-acattgcattatattttaacattgaacgcgagaaaa-------tgggtgctcaagtctcgacacaaaagtccggcagtcatgagactggcaatgtagccactg-gaggatctacaataaacttcactaacatcaactattataaggattcttacgccgcgtcagctacccggcaagatttcacgcaagacccaaagaaatttacacagccagtgttagattccattaaagaattatcagctcctttgaactccccttctgtggaagcttgtggctatagtgacagggtcgcccagcttaccgttgggaactcctccattaccacccaagaggctgccaatattgtgttggcttatggagagtggcctgagtactgccctgatacagatgcaactgccgtggataaaccaactcgcccggatgtgtccgttaacaggttctacactttggactccaaaatgtggcaagaga------------------actcgactggttggtattggaagttccccgacgtgttgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcaggcttctgtttacatgtacagtgtaatgctagtaagttccaccagggggcccttcttgtggctgtgataccggaatttgtgattgctggcagagggtctaacacaaaaccaaatg---aagcgcctcatccagggtttactacaactttccccggtaccaccggtgctacatttcatgatccatatgttctggattccggggtgccactgagccaggctctaatataccctcatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccatacatcaacgctgttccgtttgactcagccatcaatcatagtaattttggactgatagtaataccagttagtccgctgaagtattcgtctggggcaaccactgcaatcccaattaccatcactatagcccctctgaactcagagttcggaggtctgcgacaagctgtcagccaaggcatcccagctgagctcaggcccgggactaatcaattcctgactacagatgatgatactgcagcgcctatcctcccgggattcactcccacgcctataattcatataccaggggaggtgcactctttgctggagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcacagaata------aagctgatgagttgtgtgccgcgtttatggttgatccaggtcggataggaccttggcaatccaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatccttcatggcgacaggcaagatgctagtggcctactccccgcccggaagcgctcaaccagccaacagggagaccgccatgctgggcacgcacgtcatttgggactttggactacaatcatcagtctctttggtgataccgtggatcagtaacacccattttcgcactgccaagacaggtgggaattacgattactacacggcaggtgtagtgaccttatggtaccaaaccaattacgtggtcccgccagaaacacctggagaggcatatatcattgcaatgggggcggcgcaggacaacttcactttgaaaatttgcaaggatactgatgaggtaacacaacaagctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------ggggagtacagcgcgcagagctattagcagtgctacaaatgttgaat--------ccgcagccaacaccactcccagttcacaccgattagagactgggcgtgtgccagcactacaggctgcagagacaggtgccacttccaatgccacagatgagaacatgattgagacccgttgtgtggttaacagaaatggggtgttagaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacagatggggggacaa----acaccactgggtatgccacttgggacatagacattatgggctttgtccaactccgcagaaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgttacaacgactgagaatggagaagctcgtccgtacatgctgcaatatatgtatgtgccccctggtgcccccaagccgacgggaagagatgcctttcaatggcaaacagcaaccaacccgtcagtctttgtcaaactcactgaccctcctgcacaggtctcggttcccttcatgtcaccagccagcgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatatggattgtgcccaaacaacatgatgggcacctttgctgtgagagttgtcagtagggaggcaagccaactaaaattacaaactagagtatacatgaagcttaagcatgtgagagcctgggtcccgagaccggttaggtctcaaccatacttactcaaaaactttcccaattacgatagtag----caaaattgccaacagtgcacgggaccgatccagtat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaattcggacaacaatctggcgccatctacgttggtaattacagagtggtcaatagacacctggccacccacaatgactgggccaacctggtgtgggaagacagttcacgagacctgcttgtttcgtctaccactgcccagggttgcgacacaattgcccgttgtgagtgtcagacaggggtgtactactgcaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgttttcgtggaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggtcactctgaacctggggattgcgggggtatcttgaggtgtcagcatggtgtggttggcatagtgtccactggtggcaatggccttgtcggttttgctaatgtgagggatctcttgtggttggatgaagaagccatggagcagggagtgtctgactatatcaag-ggactcggcgacgcttttggtactggctttactgacgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttccgacggagcggtggagaagatcctgaagaacttggtgaaactcatatcagctctggtcatagttattagaagtgattatgacatggtcacccttactgcaactctagctcttattgggtgtcacgggagcccatgggcgtggatcaaatcaaagacggcgtccatcttaggtattcccatggctcagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaattcattgactggctcaaggagaagatcattccggctgcaaaggaaaaagttgagtttctcaataacctcaagcaattgccc-ttgatggaaaaccaaattgctaacttagagcagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctatgcaactgaagcgaagagagtgtacgccttagagaggagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattattaggggctcaccaggaactggtaagtcacttgccacaggcataatagcaagagccattgccgacaaatatcactctagtgtgtactcccttccaccagacccagaccactttgatggatataagcagcaggtggtgacagtcatggatgatttatgtcaaaacccagatggcaaagatatgtcattgttttgtcaaatggtatccacagttgactttatacccccaatggcctcactagaagagaaaggcgtatccttcacatctaaatttgttattgcttcaactaatgctagcaacatcattgtccccacagtctcagactctgacgctattcgaaggagatttttcatggactgtgatatcgaagtgactgactcttacaagacagacttaggccgcttggatgcaggtagggccgcaaagctctgttcagagaacaacactgccaatttcaagagatgcagcccgctagtgtgcggtaaagccatccagctgagagacaggaagtccaaagtcaggtatagcgtagacactgtggtgtcagagttgatcagggagtatagtaacaggtccgctataggaaacactatagaagctttatttcaaggacctcccaaatttaggcctataagaatt---agtcttgatgagaagcccgccccagatgccatcagtgacctgcttgctagtgttgatagtgaggaggtgcggcagtactgc-agagaccaaggatggataattcctgaagtgccaaccaacgtagagcggcacctcaacagggcagtattagtgatgcaatccatcgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggcttccaaggcgcatattctggagcgcccaagcaagccctcaagaaacctgtgttgagaacagccaccgttcaggggcctagcttagattttgccctgtctctcctgcgacgtaacatcaggcaggtgcaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctatcttacctcgccactcacaaccagggaagaccatctgggttgagcacaagttggtcaatgtacttgatgctgttgagctagtagatgaacagggtgttaatttagagcttacactagtaaccctagacactaatgagaagtttagagatgtcaccaagttcattccagagagtattagtggggccagtgatgccacattagtaatcaacactgaacacatgccgtcaatgtttgtcccggtaggagatgttgtccaatacgggtttttgaatcttagtggtaaaccaacccacaggactatgatgtacaatttccccacaaaggctggacagtgtggaggcgtggtaacatctgtcggcaaaatcattggcatccacattggaggcaatgggcgacaagggttctgcgctggcctgaagaggagttattttacaagtgcacaaggtgagatccaatggatgaaacccaataaggagaccggcagactaaatatcaatggcccaacgcgcaccaagttggagcccagtgtgttccatgatgtgtttgaaggcaataaggagccagcagtcctaacaagcaaggatcccagattagaggttgacttcgagcaagccctcttctccaaatacgtaggcaatgttctccacgaacctgatgaatatgtgaagcaggcggcccttcactacgcaaatcagctcaagcaactggacataaacaccaataagatgagcatggaggaagcgtgctatggtacagagaacttggaagcaattgacctccacactagtgcggggtacccatacagtgccctgggtataaagaagagagatatactagatcctaccaccagggacataacaaaaatgaagttctacatggacaagtacggtttggacttaccttactccacctacgtaaaagatgaacttaggtctctggataagatcaagaaagggaagtctcgcttgatagaggctagcagcttgaatgactcagtgtacctcagaatgacttttggccatctgtatgaaacattccatgcaaatccagggactgtgacaggatcagcagttgggtgcaatccggatgtgttttggagcaaactcccaatcttactcccaggttcattgtttgcctttgactattcaggctatgatgccagtcttagccccgtctggttcagggctttggagatagtcttacgggacattgggtattcagaggaagcagtgtcactcatagaaggaataaaccacacccaccatgtatatcggaacaaaacatattgtgtccttggtgggatgccatctggatgttctggcacctccattttcaactcgatgatcaacaacatcatcatcaggactcttttgatcaaaacctttaaagggatagatctagacgagttgaatatggtggcatatggagatgatgtgttagctagttatcctttccccattgattgctttgagctagccaagactggcaaagaatatgggctgaccatgacacctgcggacaaatcaccttgcttcaatgaagtgacgtgggagaacgccacctttctgaagagagggtttttaccagaccatcaattcccattcttgattcatcccacaatgcctatgaaagagatccacgaatccatacgttggaccaaagatgcgcgcaacacccaagaccatgtgcgctctctgtgtttattagcttggcacaacggtaaggatgaatatgaaaaatttgtgagctcaattagatcagtcccagttggaaaagcattggcaattccgaattttgagaacttgagaagaaattggctcgaattgtttt--ag-atttacagtt--------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-tg-taacc-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430805.1_Coxsackievirus_A10_strain_CVA10/Homo_sapiens/VNM/6.1/2014_polyprotein_gene_complete_cds
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtaacaccattgaaactgcggagtgtttcgctcagca--ttc-ccccc---atgtagatcaggtcgatgagtcactgct-taccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgtcctcaaacca-gaggg-tggtgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---gttcttataatggctgcttatggtgacaatcgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtc-ggatacatcccct-----taacacc--------------taaatccttcaac-acattgcattatattttaacattgaacgcgagaaaa-------tgggtgctcaagtctcgacacaaaagtccggcagtcatgagactggcaatgtagccactg-gaggatctacaataaacttcactaatatcaactattataaggattcttacgccgcgtcagctacccggcaagatttcacgcaagacccaaagaaatttacacagccagtgttagattctattaaagaattatcagctcctttgaactccccttctgtggaagcttgtggctatagtgacagggtcgcccagcttaccgttgggaactcctccattaccacccaagaggctgccaatattgtattggcttatggagagtggcctgagtactgccctgatacagatgcaactgccgtggataaaccaactcgcccggatgtgtccgttaacaggttctacactttggactccaaaatgtggcaagaga------------------actcgactggttggtattggaagttccccgacgtgttgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcaggcttctgtttgcatgtacagtgtaatgctagtaaattccaccaaggggcccttctcgtggctgtgataccggaatttgtgattgctggcagagggtctaacacaaaaccaaatg---aagcgcctcatccagggtttaccacaactttccccggtaccaccggcgctacatttcatgatccatacgttctggattccggggtgccactgagccaggctctaatataccctcatcaatggatcaatctccgcactaacaactgtgcaactgttatagttccttacattaatgctgttccgtttgactcagccatcaatcatagtaattttgggctaatagtaataccagttagtccgctgaagtattcgtctggggcaaccactgcaatcccaattaccatcactatagcccctctgaactcagagttcggaggtctgcgacaagctgtcagccaaggcatcccagctgagctcaggcccgggactaatcaattcctgactacagatgatgatactgcagcgcctatcctcccgggattcactcccacgcccataattcatataccaggggaggtgcactctttgctggagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcacagaata------aagctgatgagttgtgtgccgcgtttatggttgatccaggtcggataggaccttggcaatccaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacgggatccttcatggcgacaggcaagatgctggtggcctactccccgcccggaagcgctcaaccagccaacagggagaccgccatgctgggcacgcacgtcatttgggactttggactacaatcatcagtctctttggtgataccgtggatcagtaacacccatttccgcactgccaagacaggtgggaattacgattactacacggcaggtgtagtgaccttatggtaccaaaccaattacgtggtcccgccagaaacacctggagaggcatatatcattgcaatgggggcggcgcaggacaacttcactttgaaaatttgcaaggatactgatgaggtaacacaacaagctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------ggggagtacagcgcgcagagctattagcagtgctacaaatgttgaat--------ctgcagccaacactactcccagttcacaccgattagagactgggcgtgtgccagcactacaggccgcagagacaggtgccacttccaatgccacagatgagaacatgattgagacccgttgtgtggttaacagaaatggggtgttggaaaccactatcaaccacttcttctcccgctctggattagtgggagtagttaacctcacagatggggggacag----ataccactgggtatgccacttgggacatagacattatgggctttgtccaactccgcaggaaatgcgagatgttcacatacatgaggttcaacgcagaattcacatttgttacaacgactgagaatggagaagctcgtccgtacatgctgcaatatatgtatgtgccccctggtgcccccaagccgacgggaagggatgcctttcaatggcaaacagcaaccaacccgtcagtctttgtcaaactcactgaccctcctgcacaagtctcggttcccttcatgtcaccagccagcgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatatggattgtgcccaaacaacatgatgggcacctttgctgtgagagttgtcagtagggaggcaagccaactaaaattacagactagagtatacatgaagcttaagcatgtgagagcctgggtcccgagaccggttaggtctcaaccatacttactcaaaaactttcccaattacgatagtag----caaagttgccagcagtgcacgggaccgatccagtat---ca-------------------------------------------------------------------agcaagctaacatgggt--------aaattcggacaacaatctggcgccatctacgttggtaattacagagtggtcaatagacacctggccacccacaacgactgggccaacctggtgtgggaagacagttcacgagacctgcttgtttcgtctaccactgcccagggttgtgacacaattgcccgttgtgagtgtcagacaggggtgtactactgcaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgttttcgtggaggccagtgagtattaccctgctagatatcaatctcacttaatgctcgctgcaggccactctgaacctggggattgcgggggtatcttgaggtgtcagcatggtgtggttggcatagtgtccactggtggcaatggccttgtcggttttgctaacgtgagggatctcttgtggttggatgaagaagccatggaacagggagtgtctgactatatcaag-ggactcggcgacgcttttggtactggctttactgacgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttccgacggagcggtggagaagatcctgaagaacttggtgaaactcatatcagctctggtcatagttattagaagtgattatgacatggtcacccttactgcaactctagctcttattgggtgtcacgggagcccatgggcgtggatcaaatcaaagacggcgtccatcttaggtattcccatggctcagaagcagagtgcttcttggcttaagaagttcagcgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaattcattgactggctcaaagagaagatcattccggctgcaaaggaaaaagttgagtttcttaataacctcaagcaattgccc-ttgatggaaaaccaaattgctaacttagagcagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctatgcaaccgaagcgaagagggtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattattaggggctcaccaggaactggtaagtcacttgccacaggcataatagcaagagccattgccgacaaatatcactctagtgtgtactcccttccaccagacccagaccactttgatggatataagcagcaggtggtgacagtcatggatgatttatgtcaaaacccagatggcaaagatatgtcattgttttgtcaaatggtatccacagttgac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>KX430809.1_Coxsackievirus_A10_strain_CVA10/Homo_sapiens/VNM/8.1/2014_polyprotein_gene_partial_cds
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tatcaatagtctgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtaacaccattgaaactgcggagtgtttcgctcagca--ttt-ccccc---atgtagatcaggtcgatgagtcactgct-taccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgtcctcaaacca-gaggg-tggtgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---gttcttataatggctgcttatggtgacaatcgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtc-ggatacattccct-----taacacc--------------taaatccctcaac-acattgcactatattctaacattgaacgcgagaaaa-------tgggcgctcaagtctcgacacaaaagtccggcagtcatgagactggcaatgtagccactg-gaggatctacaataaacttcactaacattaactattataaggattcttacgccgcgtcggctacccggcaagatttcacgcaagacccaaagaaatttacacagccagtgttagattctattaaagagttatcagctcctttgaactccccttctgtggaagcttgtggctatagtgacagggtcgcccagcttaccgttgggaactcctccattaccacccaagaggctgccaatattgtgttggcttatggagagtggcctgagtactgccctgatacagatgcaactgccgtggataagccaactcgcccggatgtgtctgttaacaggttctacactttggactccaaaatgtggcaaggga------------------attcgactggttggtattggaagttccccgacgtgttgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcgggtttctgtttacatgtacagtgtaatgctagtaaattccaccaaggggcccttcttgtggctgtgataccggaatttgtgattgctggcagagggtctaacacaaaaccaaatg---aagcgcctcatccagggtttactacaactttccccggcaccaccggtgctacatttcatgatccatacgttctggattccggggtaccactgagccaggctttaatatacccccatcaatggatcaatctccgcactaacaactgtgcaactgttatagtcccatacatcaatgctgtcccgttcgactcagccatcaatcatagtaattttgggctaatagtaataccagttagtccgctgaagtattcgtctggggcaaccactgcaatcccaattaccatcactatagcccctctgaactcagaattcggaggtctgcgacaagctgtcagccaaggcatcccagctgagctcaggcccgggactaatcaattcctgactacggatgatgacactgcagcgcctatcctcccaggattcactcccacgcctataattcatataccaggggaggtgcactctttgctggagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcacagaata------aagctgatgagttgtgtgctgcgtttatggttgatccaggtcggataggaccttggcagtccaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatcctttatggcgacaggcaagatgctggtggcctactccccccccggaagcgctcaaccagccaacagggagaccgccatgctgggcacacacgtcatttgggactttggattacaatcatcagtctctttggtgataccgtggatcagtaacacccatttccgcactgccaagacaggtgggaattacgattactacacggcaggtgtagtgaccttatggtaccaaaccaattacgtggtcccgccagaaacacctggagaggcatatatcattgcaatgggggcggcgcaggacaatttcactttgaaaatttgcaaggatactgatgaggtaacacaacaagctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------ggggagtacagcgcgcagagctattagcagtgctacaaatgttgaat--------ccgcagccaacaccactcccagttcacaccgattagagactgggcgcgtgccagcactacaggctgcagagacaggtgccacttccaatgccacggatgagaacatgattgagacccgttgtgtggttaatagaaatggggtgttggaaaccactatcaaccacttcttctcccgttctggattagtgggagtagttaacctcacagatgggggtacag----acaccactgggtacgccacttgggacatagacattatgggctttgttcaactccgcagaaaatgcgagatgttcacatacatgaggtttaacgcagaattcacatttgtcacaacgactgagaatggagaagctcgtccgtacatgctgcaatatatgtatgtgccccctggcgctcccaagccgacgggaagggatgcctttcaatggcaaacagcaaccaacccgtcagtctttgtcaaactcactgaccctcctgcacaagtctcggttcccttcatgtcgccagccagcgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatatggattgtgcccaaacaacatgatgggcacctttgcagtgagagttgtcagtagggaggcaagccaactaaaactacagactagagtatacatgaagcttaagcatgtgagagcctgggtcccgagaccgattaggtctcaaccatacttactcaaaaactttcccaattacgatagtag----taaaattaccaacagtgcacgagaccgatccagcat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaattcggacaacaatctggcgccatctacgttggtaattacagagtggtcaatagacacctggccacccacagcgactgggccaacctggtgtgggaagacagttcacgagacctgcttgtttcgtctaccactgcccagggttgcgacacaattgcccgttgtgagtgccagacaggggtgtactattgcaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgtcttcgtggaggccagtgagtattaccctgctaggtatcaatcccacttaatgctcgctgcaggtcactctgaacctggggattgcgggggtatcttgaggtgccagcatggtgtggttggcatagtgtccactggcggcaatggccttgtcggttttgctaacgtgagggacctcttgtggttggatgaagaagccatggagcagggagtgtctgactatatcaag-ggactcggcgacgcttttggtactggctttactgacgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttccgacggagcggtggagaagatcctgaagaacttggtgaaacttatatcagctctggtcatagttattagaagtgattatgacatggtcacccttaccgcaactctagctcttattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcccatggctcagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaattcattgattggctcaaggagaagatcattccggctgcaaaggaaaaagttgagtttcttgataacctcaagcaactgccc-ttgatggaaaaccaaattgctaacttagagcagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctatgcaactgaagcaaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattattaggggctcaccaggaactggtaagtcacttgccacaggcataatagcgagagccattgccgacaaatatcactctagtgtgtactcccttccaccagacccagaccactttgatggatataagcagcaggtggtgacagtcatggatgatttgtgtcaaaacccagatggcaaagatatgtcattgttttgtcaaatggtatccacagttgactttatacccccaatggcctcactggaagagaaaggcgtatccttcacatccaaatttgttattgcttcaactaatgctagcaatatcattgtccccacggtctcagattctgacgctattcgaaggagatttttcatggactgtgatatcgaagtgactgactcttacaagacagacttaggccgcttggatgcaggtagggccgcaaagctctgttcagagaacaacactgccaatttcaagaggtgcagcccgctagtgtgcggtaaagccatccagctgagagacaggaagtccaaagtcaggtatagcgtagacaccgtggtgtcagaattgatcagggagtatagtaacaggtccgctataggaaacactatagaagctttatttcaaggacctcccaaatttaggcctataagaatt---agccttgatgagaagcccgccccagatgccatcagtgacctgcttgctagtgttgatagtgaggaggtgcggcagtactgc-agagaccaaggatggataattcctgaagtgccaaccaacgtagagcgacacctcaacagggcagtattagtgatgcaatccatcgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggcttccaaggcgcatattctggagcgcccaagcaagccctcaagaaacctgtgttgagaacagccaccgttcaggggcctagcttagattttgccctgtctctcctgcgacgtaatatcaggcaggtacaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctatcttacctcgccactcacaaccagggaagaccatctgggttgagcacaagttggtcaatgtacttgatgctgttgagctagtagatgaacagggtgttaatttagagcttacactagtaaccctagacactaatgagaagtttagagatgtcaccaagttcattccagagagtatcagtggggccagtgatgccacgttagtaatcaacactgaacacatgccgtcaatgtttgtcccggtaggggatgttgtccaatacgggtttctaaatcttagtggcaaaccaacccacaggactatgatgtacaatttccctacaaaggctggacagtgtggaggtgtggtaacatctgtcggtaaaatcattggcatccacattggaggcaatgggcgacaagggttctgcgctggcctgaagaggagttattttacaagtgcacaaggtgagatccaatggatgaagcccaataaggagaccggcagactaaatatcaatggcccaacgcgtaccaagttagagcccagtgtgttccatgatgtgtttgaaggcaataaggagccagcagtcctaacaagcaaggatcccagattagaggttgactttgagcaagccctcttctccaaatatgtgggcaacgttctccacgaacctgatgaatatgtgaagcaggcggcccttcactatgcaaatcagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggtacagagaatttggaagcaattgacctccacactagcgcagggtacccatacagtgctctgggtataaagaagagagatatactagatcctaccaccagggacataacaaaaatgaagttctacatggacaagtacggcttggatttaccttactccacctacgtaaaagatgaacttaggtctctggataagatcaagaaagggaagtctcgcttgatagaagctagcagcttgaatgactcagtgtacctcagaatgacttttggccatctgtatgaaacattccatgcaaatccagggactgtgacaggatcagcagttgggtgcaatccggatgtgttctggagcaaactcccaatcttactcccaggttcattgtttgcctttgactattcaggttatgatgctagtcttagccccgtctggttcagggctttggagatagtcttacgggacattgggtattcagaggaagcagtgtcactcatagaaggaataaatcacacccaccatgtataccggaacaaaacatattgtgtccttggtggaatgccatcaggatgttctggcacctccattttcaactcaatgatcaacaacatcattatcaggactcttttgatcaaaacctttaaagggatagatctagacgagttgaacatggtggcatatggagatgatgtgttagctagttatcctttccccattgattgctttgagctagccaagactggcaaagaatatgggctgaccatgacacctgcggataaatcaccttgcttcaatgaagtgacgtgggagaacgccacctttctgaagagggggtttctaccagaccatcaattcccattcttgattcatcccacaatgcctatga---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430810.1_Coxsackievirus_A10_strain_CVA10/Homo_sapiens/VNM/8.2/2014_polyprotein_gene_complete_cds
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tatcaatagtctgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtaacaccattgaaactgcggagtgtttcgctcagca--ttt-ccccc---atgtagatcaggtcgatgagtcactgct-taccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgtcctcaaacca-gaggg-tggtgcgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---gttcttataatggctgcttatggtgacaatcgag-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatc-----tacttg----tttgtc-ggatacattccct-----taacacc--------------taaatccctcaac-acattgcactatattctaacattgaacgcgagaaaa-------tgggcgctcaagtctcgacacaaaagtccggcagtcatgagactggcaatgtagccactg-gaggatctacaataaacttcactaacattaactattataaggattcttacgccgcgtcggctacccggcaagatttcacgcaagacccaaagaaatttacacagccagtgttagattctattaaagagttatcagctcctttgaactccccttctgtggaagcttgtggctatagtgacagggtcgcccagcttaccgttgggaactcctccattaccacccaagaggctgccaatattgtgttggcttatggagagtggcctgagtactgccctgatacagatgcaactgccgtggataagccaactcgcccggatgtgtctgttaacaggttctacactttggactccaaaatgtggcaaggga------------------attcgactggttggtattggaagttccccgacgtgttgaacaagacgggggtgttcggacagaatgcccagtttcattacttgtaccggtcgggtttctgtttacatgtacagtgtaatgctagtaaattccaccaaggggcccttcttgtggctgtgataccggaatttgtgattgctggcagagggtctaacacaaaaccaaatg---aagcgcctcatccagggtttactacaactttccccggcaccaccggtgctacatttcatgatccatacgttctggattccggggtaccactgagccaggctttaatatacccccatcaatggatcaatctccgcactaacaactgtgcaactgttatagtcccatacatcaatgctgtcccgttcgactcagccatcaatcatagtaattttgggctaatagtaataccagttagtccgctgaagtattcgtctggggcaaccactgcaatcccaattaccatcactatagcccctctgaactcagaattcggaggtctgcgacaagctgtcagccaaggcatcccagctgagctcaggcccgggactaatcaattcctgactacggatgatgacactgcagcgcctatcctcccaggattcactcccacgcctataattcatataccaggggaggtgcactctttgctggagttgtgtagggtggagactattttggaagtgaacaa----------------caccacagaagcaacagga------ttaacaaggctcttaataccagtgtcctcacagaata------aagctgatgagttgtgtgctgcgtttatggttgatccaggtcggataggaccttggcagtccaccttagttggacagatttgccggtattacacacaatggtccgggtctttgaaggtgacctttatgttcacaggatcctttatggcgacaggcaagatgctggtggcctactccccccccggaagcgctcaaccagccaacagggagaccgccatgctgggcacacacgtcatttgggactttggattacaatcatcagtctctttggtgataccgtggatcagtaacacccatttccgcactgccaagacaggtgggaattacgattactacacggcaggtgtagtgaccttatggtaccaaaccaattacgtggtcccgccagaaacacctggagaggcatatatcattgcaatgggggcggcgcaggacaatttcactttgaaaatttgcaaggatactgatgaggtaacacaacaagctgtgttgcaaggtgaccct--------gtggaggatataatcc---atgacgctct--------------------------ggggagtacagcgcgcagagctattagcagtgctacaaatgttgaat--------ccgcagccaacaccactcccagttcacaccgattagagactgggcgcgtgccagcactacaggctgcagagacaggtgccacttccaatgccacggatgagaacatgattgagacccgttgtgtggttaatagaaatggggtgttggaaaccactatcaaccacttcttctcccgttctggattagtgggagtagttaacctcacagatgggggtacag----acaccactgggtacgccacttgggacatagacattatgggctttgttcaactccgcagaaaatgcgagatgttcacatacatgaggtttaacgcagaattcacatttgtcacaacgactgagaatggagaagctcgtccgtacatgctgcaatatatgtatgtgccccctggcgctcccaagccgacgggaagggatgcctttcaatggcaaacagcaaccaacccgtcagtctttgtcaaactcactgaccctcctgcacaagtctcggttcccttcatgtcgccagccagcgcatatcagtggttttatgatggttaccccactttcggccagcacccggagacctcaaacacaacatatggattgtgcccaaacaacatgatgggcacctttgcagtgagagttgtcagtagggaggcaagccaactaaaactacagactagagtatacatgaagcttaagcatgtgagagcctgggtcccgagaccgattaggtctcaaccatacttactcaaaaactttcccaattacgatagtag----taaaattaccaacagtgcacgannnnnnnnnnnnat---ca-------------------------------------------------------------------agcaagctaatatgggt--------aaattcggacaacaatctggcgccatctacgttggtaattacagagtggtcaatagacacctggccacccacagcgactgggccaacctggtgtgggaagacagttcacgagacctgcttgtttcgtctaccactgcccagggttgcgacacaattgcccgttgtgagtgccagacaggggtgtactattgcaactcaaggaggaaacattatccagtcagcttctctaaacctagcctcgtcttcgtggaggccagtgagtattnccctgctaggtatcaatcccacttaatgctcgctgcaggtcactctgaaccnnnnnnnnnnnnnnnnnnnnnnnnnngccagcatggtgtggttggcatagtgtccactggcggcaatggccttgtcggttttgctaacgtgagggacctcttgtggttggatgaagaagccatggagcagggagtgtctgactatatcaag-ggactcggcgacgcttttggtactggctttactgacgcagtgtccagggaagtggaggctctgaaaaatcacctgattggttccgacggagcggtggagaagatcctgaagaacttggtgaaacttatatcagctctggtcatagttattagaagtgattatgacatggtcacccttaccgcaactctagctcttattgggtgtcacgggagcccatgggcgtggatcaaagcaaagacggcgtccatcttaggtattcccatggctcagaagcagagtgcatcttggcttaagaagttcagcgatatggcgaacgctgcaaagggattggagtggatctccaacaaaatcagcaaattcattgattggctcaaggagaagatcattccggctgcaaaggaaaaagttgagtttcttgataacctcaagcaactgccc-ttgatggaaaaccaaattgctaacttagagcagtctgctgcttcacaagaagaccttgaagtcatgtttggtaatgtgtcatacctagctca---------cttttgtcgcaagttccagccactctatgcaactgaagcgaagagagtgtacgccttagagaagagaatgaataattacatgcagttcaagagcaaacaccgtattgaacccgtatgtttaattattaggggctcaccaggaactggtaagtcacttgccacaggcataatagcgagagccattgccgacaaatatcactctagtgtgtactcccttccaccagacccagaccactttgatggatataagcagcaggtggtgacagtcatggatgatttgtgtcaaaacccagatggcaaagatatgtcattgttttgtcaaatggtatccacagttgactttatacccccaatggcctcactggaagagaaaggcgtatccttcacatccaaatttgttattgcttcaactaatgctagcaatatcattgtccccacggtctcagattctgacgctattcgaaggagatttttcatggactgtgatatcgaagtgactgactcttacaagacagacttaggccgcttggatgcaggtagggccgcaaagctctgttcagagaacaacactgccaatttcaagaggtgcagcccgctagtgtgcggtaaagccatccagctgagagacaggaagtccaaagtcaggtatagcgtagacaccgtggtgtcagaattgatcagggagtatagtaacaggtccgctataggaaacactatagaagctttatttcaaggacctcccaaatttaggcctataagaatt---agccttgatgagaagcccgccccagatgccatcagtgacctgcttgctagtgttgatagtgaggaggtgcggcagtactgc-agagaccaaggatggataattcctgaagtgccaaccaacgtagagcgacacctcaacagggcagtattagtgatgcaatccatcgctactgtagtcgcagttgtatcccttgtttatgttatctacaagctatttgctggcttccaaggcgcatattctggagcgcccaagcaagccctcaagaaacctgtgttgagaacagccaccgttcaggggcctagcttagattttgccctgtctctcctgcgacgtaatatcaggcaggtacaaaccgaccaagggcacttcaccatgcttggggtgcgtgaccgccttgctatcttacctcgccactcacaaccagggaagaccatctgggttgagcacaagttggtcaatgtacttgatgctgttgagctagtagatgaacagggtgttaatttagagcttacactagtaaccctagacactaatgagaagtttagagatgtcaccaagttcattccagagagtatcagtggggccagtgatgccacgttagtaatcaacactgaacacatgccgtcaatgtttgtcccggtaggggatgttgtccaatacgggtttctaaatcttagtggcaaaccaacccacaggactatgatgtacaatttccctacaaaggctggacagtgtggaggtgtggtaacatctgtcggtaaaatcattggcatccacattggaggcaatgggcgacaagggttctgcgctggcctgaagaggagttattttacaagtgcacaaggtgagatccaatggatgaagcccaataaggagaccggcagactaaatatcaatggcccaacgcgtaccaagttagagcccagtgtgttccatgatgtgtttgaaggcaataaggagccagcagtcctaacaagcaaggatcccagattagaggttgactttgagcaagccctcttctccaaatatgtgggcaacgttctccacgaacctgatgaatatgtgaagcaggcggcccttcactatgcaaatcagctcaagcaactggatataaacaccaataagatgagcatggaggaagcgtgctatggtacagagaatttggaagcaattgacctccacactagcgcagggtacccatacagtgctctgggtataaagaagagagatatactagatcctaccaccagggacataacaaaaatgaagttctacatggacaagtacggcttggatttaccttactccacctacgtaaaagatgaacttaggtctctggataagatcaagaaagggaagtctcgcttgatagaagctagcagcttgaatgactcagtgtacctcagaatgacttttggccatctgtatgaaacattccatgcaaatccagggactgtgacaggatcagcagttgggtgcaatccggatgtgttctggagcaaactcccaatcttactcccaggttcattgtttgcctttgactattcaggttatgatgctagtcttagccccgtctggttcagggctttggagatagtcttacgggacattgggtattcagaggaagcagtgtcactcatagaaggaataaatcacacccaccatgtataccggaacaaaacatattgtgtccttggtggaatgccatcaggatgttctggcacctccattttcaactcaatgatcaacaacatcattatcaggactcttttgatcaaaacctttaaagggatagatctagacgagttgaacatggtggcatatggagatgatgtgttagctagttatcctttccccattgattgctttgagctagccaagactggcaaagaatatgggctgaccatgacacctgcggataaatcaccttgcttcaatgaagtgacgtgggagaacgccacctttctgaagagggggtttctaccagaccatcaattcccattcttgattcatcccacaatgcctatgagagagatccacgaatccatacgttggaccaaagatgcgcgcaacacccaagaccatgtgcgatctctgtgtttattagcttggcacaacggcaaggatgaatatgaaaaatttgtgagctcaattagatcagtcccagtaggaaaagcattggcaattccgaattttgagaacctgagaagaaattggctcgaattgtttt--ag-atttacagtt--------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taac--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617117.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA10_CF204025_FRA_2010
------------------ttaaaa--cag-cct-gtgggttg-t-acccaccctca-gggcccac-t-gggcgccagcactctggtaccacggtacctttgtgcgcct-g-ttttatc-----atccc--ac---ccct--------acct-gaaacgtagaagc------------aataatca--gtc-gaccaa-tagtgggtgtggcacaccagccacatcttgg-tcaagcacttctg-tttccccgggttgagtatcaatatgctgt-tcacacggctgaaggagaaaacgcccgttatccggccaactacttcgagaagcc-tagtatcgccatgaacattgcaaggcgtttcgctcagca--ctt-ccccc---gtgtagatcaggccgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcctgt--------gggttga-cccacaggacgccttaatatagacatggtgtg-aagagcctattgagctggttggtattcctccggcccctgaatgcggctaatcctaactgtggagcacatactcacaagcca-gtggg-tggtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atacttatactggctgcttatggtgacaatcaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattgtg-----tattta----tttgtt-ggatttgtcccac-----tatcaca--------------tacatcccttaac-actttgtattttattttgaaattaaacgcaagaaaa-------tgggagctcaagtgtcaactcagaagtccgggtctcatgaaaccggtaatgtggccactg-gcggatcaacaataaatttcactaacattaattactataaagattcttatgcagcatcagccacccgacaagactttacgcaagacccaaagaagtttacacaaccagtactagattctatcagggagttatcagcccccttgaactccccatctgtagaagcttgtggttatagtgatagggttgctcaacttactgtaggaaattcctccatcaccactcaagaagctgccaacattgttctagcctacggggagtggcctgaatattgccccgacacagacgcgacagctgtggataagccaacccgccctgatgtgtcagtaaatagattctacacgttggactcaaaaatgtggcaagaaa------------------attcaactggctggtactggaaattccctgatgtgttgaacaagacaggggtattcgggcaaaatgctcaattccactatttgtaccgctcagggttttgcctgcatgtgcaatgcaatgccagcaagtttcatcagggagccctcctggtagctgtgattcccgaatttgtaattgcgggtaggggagctaacaccaagcccaaca---aagctccccatcctgggttcaccacgaccttccctggtgctactggcgccacattccatgacccatacattttggattctggagtgccgctgagtcaagctcttatataccctcaccagtggattaacctccgcactaataattgtgcaacaataatagtaccatacatcaatgctgtcccatttgattcggctattaaccatagtaattttggtttggtggtggtgccagtaagtccattaaaatactcatctggggcaactacagcaatcccaattactattactatagcccctctcaactcagaattcgggggtttacggcaagctgtcagccaaggtataccagctgaacttaggcctggaactaatcaatttttaaccacagatgatgataccgctgcacccatactcccaggatttacccccacgcccataattcacatacctggggaggtgcattccctactagaattgtgcagggtagaaactattctggaggtgaacaa----------------cactacagaggccacgggt------ctatcaaggcttttgataccagtatcctcgcagaaca------aggctgacgaactgtgcgcagcgttcatggtggacccgggccggatcgggccatggcagtccaccttagttgggcaaatttgccgatactatacacaatggtccggttctctaaaagtaacattcatgttcacaggttctttcatggctacgggcaaaatgttaattgcctactccccacccggcagtgcacaaccagctaatagggagaccgccatgctaggtacacatgtcatatgggactttggattgcaatcatcagtttccctggtgataccatggattagtaacacccatttccgcacagcaaaaacaggaggaaactacgactattatacagcaggtgtggtgacgttgtggtatcagaccaattatgtagttcctccagagacacctggtgaagcatacattatcgccatgggagcggcacaggataatttcaccctaaagatatgcaaagataccgatgaggtgacacaacaagccgtcttgcaaggtgatcct--------gtagaggatataattc---atgatgccct--------------------------cgggagtaccgtacgtagagccatcaacaacacttcaaatgtagagt--------ctgcagcaaataccgctcctagttcacatcgcctggaaactggccgtgttccagcgttacaggctgcagaaacaggtgccacctccaacgccacggatgagaatatgattgaaactcgatgcgttgtcaacaggaatggagtattggaagcctccgttaaccatttcttttctcgctctggtctggtaggagtagttaatatgtcagacgggggcacag----acactacagggtatgccacgtgggatatagacatcatgggctttgtacagcttcgcaggaaatgtgaaatgttcacgtacatgagatttaatgcagaattcacttttgttacaacaactgaaaacggtgaagctcgcccgtacatgctgcaatacatgtacgtaccccctggtgcccctaaaccaactggaagggatgcatttcagtggcaaacagcaactaatccttcaatctttgttaaacttactgaccctccagctcaagtatcagtcccttttatgtccccggccagtgcatatcagtggttttatgacgggtaccctacttttggacagcatccagagacctcgaacacggcatacggattatgccctaataacatgatgggcacctttgcagtgcgagttgtcagcacggtggcaagccaactcaaactacagactagagtgtatatgaaacttaaacatgtaaaagcatggatcccaaggccgattaggtctcaaccatatctgctcaagaacttcccaaactatgataacag----taaaatcgccaacagtgcacgagatcggtccagcat---ca-------------------------------------------------------------------aacaagccaacatgggt--------aaatttgggcaacagtctggtgccatctacataggcaactacagagtggttaacaggcacctggcaactcataatgactgggccaatttagtctgggaggatagttcaagggacctcctcgtgtcttccactactgcccaggggtgcgacaccattgcccgttgcaactgtcagatcggcgtatactactgcaactccaagaggaagcattatccagttagcttttctaaacccagtttgatattcgtagaggctagtgagtactacccagctaggtaccagtcacacctcatgcttgctgagggacactcagagcccggtgattgcggaggcatcctcaggtgccaacatggcgttgtgggcatagtgtccactggagggaatggcttggtagggtttgctgatgtaagggacctcttgtggctcgatgaggaagctatggagcagggtgtttcagattatattaag-ggccttggtgacgcctttggcacgggctttaccgatgcagtagctagagaagtggaagccttaaaaacctatctcatcggttctgaaggagcagtggagaagatcttgaagaatctagtgaagttgatctcagccctggttatagtcatcaggagcgagtacgatatggttactctcacagcaaccctagccctaattgggtgtcatgggagtccatgggcttggattaaatcaaaaacggcttctattctaggtattcccattgcgcaaaagcagagcgcatcttggttgaagaaattcaacgatatggccaatgctgcaaaagggctggaatggatttccaataaaattagcaagtttattgattggctcaaggaaaagatcattccagcagctaaagagagggttgagttccttaacaacctcaaacagctgcct-ctactagaaaaccaaatttccaacttggaacagtctgctgcctcccaagaagatctagaagccatgttcgggaatgtgtcatacctagctca---------cttttgccgaaaataccagccattgtatgcaactgaggcaaagagggtctacgtcctggagaaaaggataaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcatcaggggctcaccagggacgggtaaatcacttgccacaggaatcatcgctagggctattgcagacaagtatcattccagtgtatactcactacccccagacccagatcattttgatgggtataaacagcaagtggtcacagttatggatgatctgtgccagaatccagacggcaaagacatgtccctcttctgtcaaatggtgtcaactgttgatttcattcctccgatggcgtcactggaggagaaaggtgtatccttcacctctaagtttgttatcgcatccaccaacgccagcaacattattgtccctactgtctcggattcagacgcaattcgcaggaggttcttcatggactgtgacatagaagtgactgattcctatagaacagaccttggtcgattggatgcgggtagagctgccaaactctgttcggaaaacaacaccgccaatttcaaaaagtgtagcccgttggtgtgtggtaaagccatccaattgagagataggaaatctaaagtcaggtacagtgttgacacagtggtatcagaattgattagggaatacaacagcagatcggctatcggtaacactattgaggcacttttccaagggcccccaaaattcagaccaattaggata---agccttgaggagagaccagccccagacgctattagtgacttgttggcgagcgtggatagtgaggaagtgcgccaatactgc-agagaccaaggatggataatacctgagacaccaaccaatgtcgaacgccatcttaatagggctgtccttgttatgcaatctatagcaacagtggtggcagtggtgtcactagtctatgtcatctacaaactcttcgctgggtttcaaggagcatactctggagccccgaaacaggcactaaagaaaccagccttgagaacagctactgtacagggtcctagcttagactttgctctgtcactcttgcgacgcaatattagacaggtgcaaacggatcagggccattttacaatgctcggcgttcgcgaccgactagccatcttaccgcggcacgcacaaccaggaaaagccatatgggttgagcacaaactggtcaacatcctggatgctgtcgagttagtcgatgagcagggagtgaacttagaattaactttaataaccttagacactaatgagaagttcagagacatcactaaatttatccctgagacaattagtggcgctagtgatgccactctagtgatcaacacagagcatatgccatcaatgtttgtgccggtgggtgatgtcgtacaatacggctttctaaaccttagcggtaagcctacccaccggactatgatgtacaactttcccactaaagcaggacagtgtggaggcgtcgttacctcggttggtaaagtcgtcgggattcacattggagggaacggtcgccagggtttctgtgccggtctgaaaagaagttactttgctagtgagcaaggggaaattcaatggatgaaacccaataaggaaactgggcgattgaacatcaatggaccaacccgaactaagttggagcctagtgtgtttcacgatgtgttcgagggaaacaaagaacctgcagttttaactagcaaagaccctagattggaggtcgacttcgaacaggcccttttctccaagtatgtcggcaacacactgcacgagcccgacgagtatgtgactcaagccgctcttcactatgcgaatcaattgaaacagctagacatcaacaccaataagatgagcatggaagacgcgtgttatggaacagaaaacctggaagctatagacttgcataccagtgctggttacccctacagtgccatgggcatcaagaagagagacattcttgaccctatttctagagacaccaccaaaatgaagttctacatggacaagtatggcttggatcttccttattccacttatgtgaaggatgagcttaggtctttggataaaatcaagaggggaaagtcccgcttaattgaggcaagcagtttaaatgattctgtctatcttagaatgacctttggacacctgtatgaagtgtttcatgctaacccggggaccataaccggatcagcagtagggtgtaaccctgatgtgttctggagcaaattgccaatcttgttgcctggtgcgctcttcgcgtttgattactcagggtatgatgcaagcctcagtccagtgtggtttagagctttggaagtagtcctacgtgagatcggttactcagaggaggccgtgtcgctcatagaagggatcaaccacactcaccatgtgtaccggaacaaaacatactgtgtccttggtgggatgccatcaggttgttctggcacctctatcttcaattccatgattaataatatcataatcaggcccctcttgatcaagacctttaaggggaaagacctggatgagttgaacatggtcgcttacggggacaatgtgttggctagttacccattccctattgactgcttagagttggctaaaactggcaaagagtatggattgacaatgacacccgctgataaatcaccttgtttcaatgaagtcacctgggaaaatgccactttcttgaagagaggcttcttgccagaccatcaattcccatttctaatccatcccacaatgcctatgaaagagatccatgaatccattcgatggaccaaggatgctcgcaacacgcaagatcacgtgcgctccttgtgtctactggcttggcacaacgggaaggaagagtatgaaaaatttgtgagcacaattaggtcagttccaattggaaaagcactagctattcccaattttgaaaacctgagaagaaattggctcgaactatttt--aa-acttacagttt-------------------------aatg---------------ctggaccc-caccagga----atctggt------c-g-----tgaaaat-g-actg--------gtggggggaaatttgt-ta-taacc-a-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LT617118.1_Coxsackievirus_A16_gene_for_polyprotein_isolate_CVA10_CF166102_FRA_2010
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccacg-gggcccac-a-gggcgctagcactctggtaccacggtacctttgtgcgcct-g-ttttacc-----acccc--ac---ccct--------acct-gaaacgtagaagc------------aataacca--gcc-gaccaa-tagtgggtgtggcacaccagccacatcttgg-tcaagcacttctg-tttccccgggttgagtatcaatatgctgt-tcacacggctgaaggagaaaacgcccgttacccggccaactacttcgagaagcc-tagtaccgccatgaacattgcaaggcgtttcgctcagca--ctt-ccccc---gtgtagatcaggccgatgagtcaccgca-ttccccacgggcgaccgtggcggcggctgcgttgtcggcctgcctgt--------gggttga-cccacaggacgccttaatatagacatggtgcg-aagagcctattgagctggttggtattcctccggcccctgaatgcggctaatcctaactgcggagcacatactcacaagcca-gtggg-tggtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atccttatactggctgcttatggtgacaatcaga-------gaattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattgtg-----tattta----tttgtt-ggatttgtcccac-----tatcgta--------------tacatccctcaac-actttgtattttattctgaaattaaacgcaagaaaa-------tgggagcccaagtgtcaactcagaagtccgggtctcatgaaaccggcaatgtggccactg-gcggatcaacaataaatttcactaacattaattattataaagattcttatgcagcatcggccacccgacaagacttcacgcaagacccaaagaagtttacacaaccagtactagattctattagggaattgtcagcccccttgaactccccatctgtagaagcttgtggttatagtgatagggtcgctcaacttactgtaggaaattcctccatcaccactcaagaagctgccaacatcgttctagcctacggggagtggcctgaatattgccccgacacagacgcgacagctgtggataagccgacccgccctgacgtgtcagtaaatagattttacacgctggattcaaaaatgtggcaagaaa------------------actcaactggctggtactggaaattccctgatgtgttgaacaagacaggggtattcgggcaaaatgctcaattccactatttgtaccgctcagggttttgcctgcatgtgcaatgcaatgccagcaagttccatcagggggccctcctggtagctgtgattcccgaatttgtaattgcgggtaggggagctaacaccaagcccaaca---aagctccccatcctgggttcgccacgactttccctggtactactggcgccacattccatgacccatatattttggattctggagtgccactgagccaagctcttatataccctcaccagtggatcaacctccgcactaataaatgtgcgacaataatagtaccatacatcaatgctgtcccatttgattcggctattaaccatagtaattttggtttggtggtggtgccagtaaagtccattaaatactcatctggggcaactacagcaatcccaattactatttctatagcccctctcaactcagagttcgggggtttacggcaagctgtcagccagggtataccagctgaacttagacctggaactaatcaatttttaaccacagatgatgataccgccgcgcccatactcccaggatttacccccacgcccgtaattcacatacctggggaggtgcattccctgttagaattgtgcagggtagaaactattctggaggtgaacaa----------------cactacagaggccacgggt------ctatcaaggcttttgataccagtatcctcgcagaaca------aggctgacgaactgtgcgcagcattcatggtggacccaggccggattgggccatggcagtccaccctagttgggcaaatctgccggtactatacacaatggtccggttctctaaaagtaacattcatgttcacaggttctttcatggctacgggcaaaatgttaattgcctactccccacccggtagtgcacaaccagctaatagggagactgccatgctaggtacacatgtcatatgggattttggattgcaatcatcagtttccctggtgataccatggattagtaacacccatttccgcacagcaaaaacaggaggaaactacgactattatacagcaggtgtggtgacgttgtggtatcagactaattatgtagttcctccagagacacctggtgaagcatacattatcgccatgggagcagcacaggataatttcaccctaaagatatgcaaagataccgatgaggtgacacaacaagccgtcttgcaaggtgatcct--------gtagaggatataattc---atgatgccct--------------------------cgggagcaccgtacgtagggtcatcaacaacacttcaaatgtagagt--------ctgcagcaaataccgctcctagttcacatcgcctggaaactggccgtgttccggcgttacaggctgcagaaacaggtgccacctccaacgccacggatgagaatatgattgaaactcgatgtgttgttaacaggaatggagtactggaagcctccgttaaccatttcttttctcgctctggtctggtaggggtagttaatatgtcagacgggggcacag----acactacagggtatgccacttgggatatagacattatgggctttgtacagcttcgcaggaaatgtgaaatgttcacgtacatgagattcaatgcagagttcactttcgttacaacaactgaaaacggtgaagctcgcccgtacatgctgcaatacatgtacgtaccccctggtgcccctaaaccaaccggaagggatgcatttcagtggcaaacagcaactaatccttcaatctttgttaaactcactgaccctccagctcaagtatcagtccctttcatgtccccggccagtgcatatcagtggttttatgacgggtaccctacttttggacagcacccagagacctcgaacacagcatacggattatgccctaataatatgatgggcacctttgcagtgcgagttgtcagcacggtggcaagccagctcaaactacaaactagagtgtatatgaaacttaaacatgtaaaagcatggatcccaagaccgattaggtcacaaccatatctgctcacgaacttcccaaactatcataacag----tgccatggccaacagtgcaccatatcggtccagtat---ca-------------------------------------------------------------------accaagccaacatgggg--------aaatttggccaccagtgtggtgccatctacataggtaactacagagtagttaacagacacctggcaactcataatgactgggctaatttagtctgggaagatagttcaaggaacctcctcgtatcttccactactgcccaggggtgcgacaccattgcccgttgcaactgtcagaccggcgtatactactgcaactccaagaggaagcattacccagttagcttttctaaacctagtttgatatttgtagaggctagtgagtactacccagctaggtaccagtcacacctcatgcttgctgagggacactcagagcccggtgattgtggaggcatcctcaggtgtcaacatggcgttgtgggcatagtgtccactggagggaacggcttggtagggtttgctgacgtaagggacctcttgtggctcgatgaggaagctatggagcagggtgtttcagattatattaag-ggccttggtgacgcttttggcacgggctttaccgatgcagtagctagagaagtggaagccttaaaaacctatctcatcggttctgaaggagcagtagagaaggtcttgaagaatttagtgaagttgatctcagccctggttatagttatcaggagcgattacgatatggttactctcacagcaactctagccctaattgggtgtcatgggagtccatgggcttggatcaaatcaaaaacagcttctattctaggcattcctattgcgcaaaagcagagtgcatcttggttgaagaaattcaacgatatggctaatgctgcaaaagggctggaatggatttccaacaaaattagcaagtttattgattggctcaaggaaaagatcatcccagcagctaaggagagggttgagttccttaataacctc-aacagctgcccgctactagaaaaccaaatctccaacttggaacagtctgctgcctcccaggaagatctagaagccatgttcgggaatgtgtcatacctagctca---------tttttgccgaaaataccagccattatatgcaactgaggcaaagagggtctatgttttggagaaaaggatgaacaattatatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcatcagaggctcaccaggaacgggtaaatcacttgccacaggaatcatcgctagagctattgcagacaagtatcattccagtgtatactcactacccccagacccagatcattttgatggatataaacagcaagtggtcacagttatggatgatctgtgccagaatcctgacggcaaagacatgtctctcttctgtcaaatggtgtcaactgttgatttcattcctccgatggcatcactggaggagaaaggtgtatccttcacctctaagtttgtcattgcatccaccaacgccagtaacattattgtccctaccgtctcggattcagacgcaattcgcaggaggttcttcatggactgtgacatagaagtgactgattcctataaaacagaccttggccgattagatgcaggtagagccgccaaactctgttcggaaaataacaccgccaacttcaaaaagtgtagcccgttggtgtgtggtaaagctatccaattgagagacaggaaatctaaagtcaggtatagtgttgacacagtggtatcagaattgattagggaatataacagtagatcggctatcggtaacactattgaagcagctttgcaagggaccccaaaattcagacgatttaggata---agccttgaggaaagaccagccccagacgccattagtgatctgttggcgagcgtggatagggagaaggtgcgccagtactgc-agagaccagggatggataatacttgagacaccaaccaatgtcgaacgccatcttaatagggctgtccttgttatgcaatctatagcaacagtggtggcagtggtatcgctagtctatgtcatctacaagctctttgctggatttcaaggagcatactctggagctccgaaacaggtaccaaagaaaccaaccttgagaacagcaactgtacaaggtcctagcttagattttgctttgtcactcttgcgacgcaacattagacaggtgcaaacggatcagggccattttacaatgctcggcgttcgcgaccgactagccatcttaccgcggcacgcacacccaggaaaaaccatatgggttgagcataaactagtcaacatcctggatgctgtcgagttagtcgatgagcaaggagtgaacttagaattaactttagtaaccttagacactaatgagaagttcagagacatcactaaatttatccctgagacaatcagtggcgccagtgatgccacactagtgatcaacacagagcatatgccatcaatgttcgtgccggtgggtgatgtcgtacagtacggctttctaaaccttagtggtaagcctacccaccggaccatgatgtacaactttcccactaaagcaggacagtgtggaggtgtcgttacctcggttggcaaagtcatcgggattcacattggagggaacggccgtcagggcttctgtgccggtctgaaaagaagttactttgctagtgagcaaggggaaattcaatggatgaaacctaataaggaaactggacgactgaacatcaatggaccaacccgaactaagttggagcctagtgtgttccacgatgtgttcgagggaaacaaagaacctgcagttttaactagcaaagaccctagattggaggtcgactttgaacaggcccttttctccaagtatgtcggcaacacactgcacgagcccgacgagtatgtgattcaagccgctcttcactatgcaaatcaattgaaacaactggacatcaacaccaacaagatgagcatggaagacgcgtgttatggaacagaaaacctggaagctatagacttgcataccagtgctggatacccctatagtgccataggcatcaagaagagagacattcttgaccctatttccagagacaccaccaaaatgaaattctacatggacaagtatggcttggatcttccttattccacttatgtgaaggatgagcttaggtctttggataagatcaagaagggaaagtcccgcttaattgaggccagcagcttgaacgattctgtctatcttagaatgaccttcggacacctgtatgaagtgtttcatgctaacccggggaccataaccggatcagcagtggggtgtaaccctgatgtgttctggagcaaattgccaatcttgttgcctggtgcgctcttcgcgtttgattactcagggtatgatgcaagcctcagtccagtgtggtttagagctttggaagtagtcctacgtgagatcggttactcagaggaggccgtgtcgctcatagaagggatcaaccacactcaccatgtgtaccggaataaaacatactgtgtccttggtgggatgccatcaggttgctctggcacttctatcttcaattccatgattaataatatcataatcaggacccttttgatcaagacttttaaggggatagacttggatgagttgaatatggtcgcttacggggacgatgtgttggctagttacccgttccctattgactgcttggagttggctaaaactggcaaagagtatggattgacaatgacacccgctgataaatcaacttgtttcaatgaagtcacctgggaaaatgccactttcttgaagagaggcttcttaccagaccatcaattcccatttctgatccaccccacaatgcctatgaaagagattcatgaatccattcgatggaccaaggatgctcgcaatacgcaagatcacgtgcgctctttgtgtctactggcttggcacaacgggaaggaagagtatgagaaattcgtgagcacaattagatcagttccaattggaaaagcactagctattcccaattttgaaaacctgagaagaaattggctcgaattatttt--aa-acttacagttt-------------------------aata---------------ctgaaccc-caccagga----atctggt------c-g-----taaaaat-g-actg--------gtgggggtaaatttgt-ta-tacca-g-g-aatag---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY421760.1_Human_coxsackievirus_A2_strain_Fleetwood_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcactctggtatcacgatacctttgtgcgcct-g-ttttata-----tcccc---a---cccc--------gagt-aaacgttagaagt------------tacgca--acccc-gatcaa-tagtaggtgtagcactccagctgcatcgaga-tcaagcacttctg-tctccccggaccgagtatcaatagactgc-taacgcggttgaaggagaaaacgttcgttacccggccaattacttcgagaagcc-cagtagtgccgtgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggctgatgagtcaccgcg-atccccacaggtgactgtggcggtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaatacagacatggtgcg-aagagcctattgagctaattggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaaacca-ggggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttataatggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgactaacaaatcgctcata-----taccag----tttgtt-ggttttgttccct-----tatcaca--------------tacagctcataac-accctcttatatttactacaattgaatagcaagaaa-------tgggggcacaggtctcaactcagcgctccggttcccatgaaacgagcaacgtagcacgag-acggatccaccatcaacttcaccaacataaactattacaaggactcctatgctgcttcagcggctaaacatgatttcacccaggatccgggtaaatttacacagcccgttcttgatgctcttcgcgaggctgtaccaccactacagtcacccagtgcagaggcatgtggctacagtgatagggtagcccaattgactgttggcaactccacaatcacgactcaggaggctgcaaatatcatagtatcttacgctgagtggccagagtactgccctgatacagacgccacagcggtagataagcccactcgccccgatgtgtcagtgaacagattctatactatgccggcaacattatgggagacag------------------agtcaaaaggttggtattggaagttccctgacctgctcaatgagataggggtcttcggacagaacgcacagtaccactacttgtacagatcaggcttttgcattcacgtacaatgtaatgccagcaagtttcaccagggtgctctcctagtagctgtgatcccggaattcgttgttgctgagcaggacgccactcaaaaacctaata---cagcaaaacaccccgctttagaagccacacaacctggaaagaaaggcagggcatttatacatccatacgttcttgattgtggagtaccgntgagtcaggctctagtgttcccccatcagtggataaatctgcgcaccaacaattgtgctacaattgtggttccttacatcaacgcattgccctttgattctgcaataaatcactccaatttttcactggctgtcgtaccagtgtgcccgttaaagtataacactggtgccaccccttcgataccgatcacaattacagttgctccactgtgctctgaattcgctgggctgcgccaggcagtgaaacagggcatcccggtggaaatgaagccaggtacaaatcaatttctaactactgatgatggaacttcagcgccaatactgccaggttttcaccccacaccagctatccacattcctggggaagttcacagtttgctggagttatgccaggtggaaactatgttggaagttaataa----------------tacaactagagcagtggaa------ctcgaccggttaaggatacctgtgtccgcccagagcg------cagtggacaccttgtgtgcagcgtttagagtggatcccggtagggatggaccatggcagtccactatggtcgggcaattatgcaggtactacacacagtggtcaggctccctgaagataacattcatgttcacaggctccttcatggctacaggaaagatgctggtcgcttacactcctccaggaggcgcccagccagctactcgagaactcgctatgttgggcacacatgtgatctgggattttggcttacagtcatcagtgacactagtgatcccttggataagcaacacacactatagggccgttgaaactgggggtgtatttgactactacacgaccggtgtggtgactatatggtatcaaacaaattttgtggtccctcctgacactcccactagcgcttacatcttggcatttggagcgggtcagaagaatttcactctcaagctgtgcaaagacactgacgagattacacaacaagcggtgttgcagggtgacggt--------atcgaagatgctataa---ccaacactgt--------------------------aaatgccactataaacagagtgttggatcg--accgatttctcactc---atccacagctgcaaacacccaggtgagtcaacactcaattgagacaggtcgcgtgcccgcacttcaagctgctgaaacgggtgcaacgtccaacgcatccgatgaaaatctaattgaaactaggtgtgtagtcaacaagaacagtgtggaggaagctagcttaaaccacttcttctcccgtgctgcattagttggcaaagtggagctaaatgacacagggacgg----ctgctacagggttcaccaattggaatattgacataatggggtatgcgcagttgcggaggaaactagagatgttcacatacatgaggttcaatgctgaattcacttttgtggccaccactagggctgggcaggtgccgtctagggtgcttcagtacatgtacgtccccccaggggcgcctaagccagacggtagggaggcttttcagtggcagtcctcaaccaacccatcagtgtttagtaagatgacagaccctccgccgcaagtgtcagtaccatttatgtctcccgctagcgcttatcaatggttctacgacgggtatcccactttcggtgaacacaatggtgaagacagcctgcggtacgggcaatgcccaaacaacgcactgggcacattctcagtaaggtttgtcagtgaagagatcaccaacgagcggatcaccatcaggatttacatgaggctcaagcacatacgagcttgggttccacgaccgctcaggtctgaaccttacgtgctgaagaactttccaaattac------ac----tgccgttacccatgtcacagctaaccggcctagcat---caccaa---------------------------------------cacaggc------------------------------------------aggtttgggcaacagtccggggccatatacgttggcagctatagagtagtgaacagacaccttgccactcacaatgattgggctaacttagtgtgggaagacagctccagagaccttttggtatcttcaaccaccggccaggggtgtgacaccattgctcgatgtaattgtcagaccggggtgtattattgcaactcccggaggaaacactatccagtcagtttttctaaacctagcctggtgttcgtcgaggccagcgagtattacccagccaggtaccaatcacacctcatgctggccgagggacactcagagcctggagattgtggtggtattctcaggtgtcagcacggtgtcgtgggaattgtatccactggagggaacggtcttgtggggtttgctgatgttagggacctgctttggcttgatgaagaagctatggagcagggagtatctgattacatcaaa-ggtctcggcgatgccttcggcacgggctttactgacgcagtgtctagggaggtggaagcattaaaaaaccacttgatcggttctgaaggggctgtcgaaaaaatcttgaagaatctggtgaaactaatttcagccttagttatagtcatcaggagcgattacgacatggtcactctcacggctacgcttgctctgatcgggtgccatgggagtccttgggcgtggattaaatcaaagacagcttccatcctaggtattcccatggcacaaaagcagagtgactcatggttaaagaagtttaatgacatggcaaatgctgcaaaagggctcgagtgggtctctaacaagattagcaagtttattgattggcttaaggagaagattattccagccgctaaggagaaagtcgagttcttaaacaacctaaagcaacttcct-ctgttagaaaatcaaatctccaatcttgagcagtctgctgcctcgcaagaggacctagaagctatgtttggcaacgtgtcgtacctagctca---------cttttgccgcaagtttcaaccactctatgcaactgaggctaagagagtctatgctttggagaaaagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtgtgtttgatcattaggggttctccaggaacagggaagtcacttgccacgggtattatagctagagccattgctgacaaataccactccagcgtctactcgcttcccccagacccagatcacttcgatgggtataaacaacaggtggtcacagttatggatgatctctgccagaatccagatgggaaagacatgtccctattttgtcaaatggtttctacagtggattttataccacctatggcatcgttagaggaaaaaggggtgtccttcacatctaagtttgtcattgcatcaactaacgctagtaacatcatagtccccactgtctcagactcagatgcaattcgcaggcgattttacatggactgtgacatagaagtgacagattcttacaagacagatctcggccggttggacgcaggcagggctgctaagctttgtacagagaacaacactgccaacttcaaaagatgcagtccactagtgtgcggcaaagccatccagctgagagacaggaagtccaaggtaagatacagtgttgatactgtggtgtcagagctagtcagggagtataacagtagatctaccattggaaacaccatagaggcactctttcaagggccccccaagttcagacccatacgaatc---agcctcgaagagaggccagcaccagatgctattagtgacttgctcgccagtgttgatagtgaggaggtccgacagtactgc-agggaacaagggtggataatcccagagacaccaactaatgtggaacggcacctcaatagagcagtcttagtgatgcagtccattgccactgtggttgcggttgtgtctcttgtctatgttatttacaagctgtttgccggattccaaggtgcttactctggagcacccaagcaagcactcaagaagcctgtgttaagaacagctacagttcaaggacctagcntggrcttcgccttgtcccttntaaggcgcaacatcagacaggtacagactgaccaggggcacttcaccatgctaggcgtacgagaccgcttagccatcttgccacgccactcacagccagggaaaaccatctggatagagcacaaattggttaacatactagatgcagctgaactggtggatgagcaaggtgttaatttagaacttacactggtgaccttggacactaatgagaagtttagggatatcactaagttcatcccagagacaatcactggagcgagtgatgcaacattagttatcaacactgagcacatgccctcaatgtttgtgccagtgggtgatgttgtgcaatatgggttcttgaatctcagtggtaaacctactcacagaaccatgatgtacaatttccccacaaaagcaggacagtgtgggggggtagtcacttcagttggcaaggtcattggaatccacattggcggaaatggacgccagggcttttgcgccggcttaaagaggagctactttgctagtgaacaaggagagatccagtggatgaaacctaacaaagaaactgggaggctgaatatcaatggtccaactcgaaccaaattagaacccagtgtgtttcatgatgtgtttgagggcaataaggagccggcagttctgaccagcaaagatcccaggttggaggttgatttcgaacaagccctgttctctaaatacgtgggaaacaccctacacgagcccgatgagtatgtgacacaagctgcccttcactacgcaaatcaactaaaacaactagacataaataccagtaagatgagcatggaggaagcatgctatggcacagagaatttggaggctattgatctgcacaccagtgctggatatccttatagtgctttgggcattaaaaagagggacattctcgatccagtcactagggacacctccaagatgaaactatatatggataagtatgggttggatttgccctactccacctatgtgaaggatgagcttaggtccctagataaaatcaagaagggaaaatctcgcttgattgaagccagcagtctaaatgactctgtctatcttagaatgacttttggccatctttatgaggtattccacgccaatccgggaactataactggatctgcggtggggtgtaatcctgacgtgttttggagcaagctgccaatcctactaccaggctcgctctttgcatttgactactcagggtacgatgcaagcctcagtcctgtgtggttcagagctctagaactggttctacgagagattggttactcggaggaggctgtgtcactcatagaagggattaatcacacccaccatgtgtatcggaacaagacatactgcgttcttggtgggatgccctcaggttgctctggcacttcaattttcaattccatgatcaacaacataatcattagaacccttttgattaaaacgttcaaaggaatagacttggatgaactgaacatggtggcttacggagatgatgtactggctagctacccattccccattgattgctcggaattggcgagaactggtaaggagtacgggctgactatgactcctgctgacaagtcaccctgctttaatgaagtcacctgggagaacgcaaccttcttgaagaggggttttctaccagaccaccagttcccttttttaatccaccccaccatgcccatgagggaaatccacgagtccattcgttggaccaaggacgcacgaaacactcaagaccacgtgcgttccctttgcttgttggcgtggcacaatggaaaggaggaatatgaaaaatttgtgagcacaatcagatcagttcccattggaaaagctttggcgataccaaattttgagaacttaagaaggaattggctcgaattgtttt--aa-acttacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgtgaat-t-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY421764.1_Human_coxsackievirus_A6_strain_Gdula_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcacactgatttcccggaatccttgtgcgcct-g-ttttata-----tcccc--tc---cccc--------atgc-gcaacttagaagc------------aatctacaccttc-gatcaa-tagcaggcgtggcgcgccagccatgtctaga-tcaagcacttctg-tttccccggactgagtatcaataaactgc-tcacgcggttgaaggagaaaatgttcgttacccggctaactacttcgagaaacc-tagtagcaccatgaaaattgcagagcgtttcgctcagcg--ctt-ccccc---gcgtagatcaggctgatgagtcactgca-ttcctcacgggcgaccgtggcagtggctgcgttggcggcctgcccat--------ggggtaa-cccatgggacgctctaatatggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatacccccaaacca-ggggg-cggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgaa-------agattgttaccatatagctattggattggccatccgg--tgaataacagagccttgata-----tacctt----tttgta-gggtttataccac-----ttactct--------------tcgcgttgttgag-actctaaagtacattctaatcttgaacactagaaaa-------tgggtgcacaagtttcagcacaaaagtccgggacacacgagacaggaaatatagcgaccg-aagggtccactattaacttcactaacattaactactacaaagattcatatgctgcttcagctagcaggcaggattttacacaagaccccacaaaatttacaagtcctgttttggacgccattaaggaggctgccgcgccattgcaatctccatccgttgaggcgtgtggctatagtgaccgtgtcgcccagctaactgttggcaattcgaccattaccacacaagaagctgctaacatagtgttgagttatggtgaatggccaggatactgcccctccacggacgctacagctgtggataagcccacacggcccgatgtgtcagtgaataggttttacactttatcaaccaagagttggaaaacag------------------agtccactggctggtactggaaattccctgacgtgctgaatgacacaggagtctttggtcaaaatgcccagtttcactatctgtaccgctcgggcttttgcatgcatgttcaatgtaacgcgagcaaatttcaccaaggggctctcttagtggttgtgattcctgagttcgtggttgctgcgagcagccctgctacgaagcccaacggacaagggttgtaccctgactttgctcacaccaacccgggcaaagaaggtcaagtgttccgagacccttatgtcctggatgccgggattccgctcagtcaagcactagttttcccccatcaatggatcaatttgcgcaccaataactgtgcaaccattatcatgccatatgttaatgcactcccgttcgattcagcactcaaccattctaattttggcttggctgtgattcctatcagtcccttgaaatattgtaatggagctaccacagaggtgccaatcacactgaccattgcaccacttaattcggaattcagcggcctccgtcaggcaataaaacaaggactccctacggagcttaaacctggaaccaaccaattcctcacaactgacgatggaacatcccccccaattctgcctggcttcgaaccaacaccattgattcacatccctggggagttcacttctctactagatctatgccggatagagactatactggaagtcaacaa----------------cactactggtactaccggg------gtcaatagactattgattcctgtccgagcacagaaca------atgtggatcaactttgtgcttcatttcaagtggatcctgggcgtaatggcccatggcaatctacaatggttgggcagatctgcagatattacactcaatggtctggctctctcaaagtaaccttcatgttcacaggttcttttatggctacagggaaaatgttaatagcttatactccacctggtagtgctcaaccaaccacgagggaggcagcgatgctcggcacacatatagtgtgggactttggtttgcagtcttcggtgactctggtaataccatggatcagtaacactcatttcagggcagtcaagaccggtggagtgtatgattactacgcaaccgggattgttacgatttggtatcaaaccaatttcgtggttccaccagacaccccttctgaggccaacatcatagctctcggagcggcacaagagaattttaccctcaaactgtgcaaagacactgacgagattcggcaaacagctgaatatcaaaatgacccc--------atttcaaatgcaatag---aaaatgctgt--------------------------gagca-cactcgctgac---------------accacgatatcacgt----gttacagcggccaacactgctgctagctcccattcccttggtactggacgcgtgccggcgttgcaggctgcggagacaggggcaagttccaacgctagcgatgagaacctgattgaaactcgttgtgtgatgaatagaaatggagttaacgaagcaagtgtagaacacttctactcccgtgcagggctagtaggagttgtggaggtgaaagactcaggcacta----gtcaggacgggtacacggtgtggcccatagatgtgatgggctttgtgcaacagcggcgcaagttagagctatctacttacatgcgctttgacgctgaatttacctttgtgtccaatctcaatgacagcacaacacccggcatgctattgcagtacatgtacgtgccgccgggtgcgcccaaaccagacggtaggaagtcatatcaatggcaaacagccaccaacccttcaatattcgcaaagttgagtgacccaccgccccaagtgtctgtcccattcatgtcaccggcgtcagcctaccagtggttctacgatggttaccccacgtttggcgaacacaagcaagctactaatttacaatacggtcagtgccctaacaacatgatggggcattttgctattcggacagttagtgaatccaccaccgggaaaaatgtccatgtccgggtgtacatgagaattaagcacgtaagagcatgggtgcccagacctttcagatcccaagcttacatggtcaaaaactacccgacatacagcca-aa----caatatccaatac--tgcagccgatcgtgcgagcat---aaccac---------------------------------------tacggactatgagggtggcgtaccagcaaacccgcagagaacttttggtaaatttggacaacagtctggcgccatctatgtgggtaacttcagagtagtaaacagacacctagccactcataatgactgggccaacttggtatgggaagacagctctagagaccttttggtttcttcaaccaccgcccaagggtgcgacaccattgctcgatgtaactgccagactggagtgtactattgtaactcccgtagaaagcactacccggtcagcttctcaaaacctagcctggtattcgttgaagccagcgagtattacccagctagataccaatcacacctcatgcttgccgtaggacattcagagcctggggattgcggtggcatactcaggtgccaacacggtgtcgtagggatcgtgtccactggggggaacggccttgtagggtttgccaatgtcagggatctgctttggcttgatgaggaagctatggagcagggagtatctgattatatcaaa-ggtctcggcgatgcctttggcacgggcttcactgacgcagtgtctagggaagtggaagcattaaaaaatcacttgatcggttctgagggggctgttgagaagatcttgaagaacctggtgaagctaatctcagccctagtcatagtcatcaggagcgattacgacatggttaccctcacagctacgcttgctttgattggttgccatgggagtccctgggcgtggatcaaatcaaagacagcctccatcctaggtatccctatggcacaaaagcagagcgcctcatggctaaagaagtttaatgatatggcaaatgctgcaaaagggcttgagtggatctctgacaagatcagcaaattcatcgattggctcaaggagaagattatcccagccgccaaggagaaagttgagtttttaaacaacttaaaacaactcccc-ttgttagaaaaccaaatctctaaccttgaacaatctgctgcttcgcaagaggacctagaagcaatgtttggtaacgtgtcgtacttagctca---------cttttgccgcaagttccaaccactctacgcaattgaggccaagagagtctatgccctggagaaaagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattagaggctctccaggtacagggaaatcacttgctacaggtattatagctagagctattgctgataaataccattccagtgtctattcgctccctccagacccagatcacttcgacgggtataaacaacaggtggtcacagtcatggacgatctctgccagaatccagacgggaaagatatgtctctgttttgccaaatggtctccacagtggacttcataccacccatggcatcgctagaggaaaaaggcgtatccttcacctccaagtttgtcattgcatcgaccaacgctagcaatatcatagtccccacagtctcagactcagatgcaatccgcaggagattctatatggactgtgacatagaagtaactgactcttacaagacagatcttggccgattggacgcgggtagagctgccaagctttgttcagagaacaacactgctaacttcaaaagatgcagtccacttgtgtgtggcaaagccatccaattgagggataggaagtccaaagtcagatatagtgttgacactgtagtatcagagctaatcagagagtacaacaacagatccgctattgggaacaccatagaagcactcttccaagggccccccaagttcagacccataagaatt---aacctcgaagagaagccagcgccagatgctatcagcgacttgctcgctagtgttgatagtgaagaggtccggcagtattgc-agagagcaagggtggataatcccagaaacaccaaccaacgtggaacggcacctcaatagagcagtcctggtaatgcagtccgttgccaccgtggttgcggttgtgtctcttgtttatgtcatttacaagttgtttgccggatttcaaggtgcttattccggagcacccaagcaagcactcaagaagcctgtgctaagaacagctacagtccaaggacctagcttggactttgctttgtctctcctgaggcgtaacatcagacaggcgcagaccgaccagggtcacttcaccatgctgggcgtacgggaccgcttagctatcctgccacgccactcgcaaccagggaaaaccatctggatagaacacaaattggtcaatgtattagatgcagttgaattggtggatgaacaaggtgttaatttagaactcacactgctgaccttggacactaatgagaagtttagggacatcactaagttcattccagaggcaatcactggagcgagtgatgcaactctagttatcaacactgagcacatgccctcgatgtttgtaccagtaggtgacgttgtacagtatgggttcttgaatctcagtggtaaacctactcacagaaccatgatgtacaatttccctacaaaggcaggacaatgtggaggggtggtcacctcagttggcaagatcattggaatccacattggcggaaatggacgtcagggcttctgcgccggcttaaagaggagctacttcgccagtgaacaaggagaaatccagtggataaaacctaacaaagaaactgggaggctgaatattaatggtccaactcggaccaaattggagcccagtgtattccatgatgtgttcgagggcaacaaagagccggcggttttgaccagcaaggatcctaggttagaggttaattttgagcaagctctgttctctaagtacgtgggcaacactctacatgaacctgatgagtatgtgacacaagctgccctccactatgcaaatcagctgaaacaactagacataaacaccagcaagatgagcatggaggaggcgtgctatggtacagaatatttggaagcaatagacctgcatactagtgctgggtacccttatagcgccctgggtattaagaagagagacattctcgatccagctaccagagacacttccaagatgaaattatacatggacaagtatggactggatttgccctactccacttatgtaaaggatgagcttagatctctagacaaaattaagaaaggaaagtctcgcttaattgaggccagcagcctaaatgactctgtctaccttagaatgacttttggtcatctatatgaggtgtttcacgccaacccgggaaccataactggatctgcagtcgggtgtaatcctgatgtgttctggagtaagctgccaatcttactgccgggctcgctctttgcatttgactactcaggatatgatgcaagccttagtcctgtatggtttagagctctagagttggttctgcgggagatcggttacacggaggaggctgtgtcactcatagaaggaattaaccacactcaccacgtgtaccggaacaagacatactgtgttcttggtgggatgccctcaggttgctctggtacttccattttcaattccatgattaacaacataatcatcagaaccctcttgattaaaacgttcaaaggtatagacttagatgaattgaacatggtggcctacggggatgatgtgttggctagctacccatttcccattgattgcttggaattggcaaaaactggcaaggagtacggattgaccatgactcctgccgacaaatcatcctgtttcaatgaagtcacctgggagaatgcaactttcttaaaacggggtttcttaccagatcatcagtttccttttctgatccatcccaccatgcccatgagggaaatccacgagtccattcgctggaccaaggatgctcgtaatactcaggaccacgtgcgctccctttgtttgctggcatggcacaatggaaaagaggaatatgagaaatttgtgagcacaattagatcagttcccattggaaaagctttggcaataccaaattttgagaacttgagaagaaattggctcgaactatttt--aa-acttacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgtgaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY421767.1_Human_coxsackievirus_A10_strain_Kowalik_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactctggtaccgtggtacctttgtgcgcct-g-ttttata-----ccccc--tt---cccc--------gttt-gaacattagaagt------------aacgca---cctc-gatcag-tagcaggcgcggcgcaccagccgtgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaact-tagtagcaccatggaagttgcagagtgtttcgctcagca--ctc-cccccccagtgtagatcaggctgatggatcaccgcg-ttcctcacgggtgaccgtggcggtggtcgcgttggcggcctgcccat--------ggggcaa-cccatgggacgctctaatatggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgtgtccccaaccca-gggga-tagcgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc---ttt---attcttatcctggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccgg--tgtctaacagagctataata-----tatctt----tttgtt-gggttcgtacccc-----tcaattt--------------tgaggttgttctc-acattaaagtacatcttggtgttaaatatcagaaga-------tgggagcacaagtttcatctcagaggtcaggatcccacgagactgggaatgtggctactg-gaggatcgaccatcaacttcaccaatataaattattacaaggattcatatgcagcttctgctagtcgtcaggacttcacacaagatccaaagaagttcactcaaccggttttggattccatcagagagctgtctgcccccttgaattcaccatcagttgaagcgtgtggatatagtgaccgagtggcacaactaacggtgggtaactcctccattacgacacaagaggctgccaatatagttttggcatacggtgagtggcctgagtactgccctgatactgacgcaacagcggtggacaagcctactcgtccggatgtgtcagttaatagattctacactttagattcaaagatgtggcaagaga------------------actctactggatggtattggaagttcccagatgttttgaacaagaccggggtgtttggtcagaatgcacagttccactacttgtatcgttcagggttctgtcttcatgttcaatgtaacgctagcaaatttcaccagggggctcttcttgtggcagttatcccggagttcgttctagcaggcagaggttcaaacacgaagcccaatg---aagcccctcacccgggatttaataccacctttcctggcactgctggcgcttccttcaacgacccgtacgtgcttgactctggggtacctcttagccaatccttaatatacccacatcagtggatcaacttaaggaccaacaattgtgcaacaataatagtaccttatatcaatgctgtcccctttgattcagccatcaatcatagcaactttggattaatagttgtgcctgtgagtccgctgaaatactcttcaggggccaccactgcaatcccaatcacagtgaccatagcgcccctcaattccgaatttggtgggctgcgccaagctgtcagccagggactccctaccgagttaagaccaggcaccaatcagttcctaacaacggaagatgatactgccgcacccatactcccaggtttctcccccaccccaagcatccacattccaggagaagtacgctcattactagaactgtgtagggtggaaaccatactggaagtgaacaa----------------cacgaccgatgcaaccggt------ctgaacagactcctaattccagtctccgcccaaaaca------aggcagatgaactatgtgctgcattcatggttgatcctggtcgtatcgggccctggcaatcgactttggttggtcaaatatgtaggtactacacacaatggtcaggctcgttaaaggtcacattcatgtttacaggctcttttatggcaacaggtaagatgctgatagcgtactcaccaccaggcagtgctcaaccagccaatagggagaccgcaatgctcgggacccacgtcatatgggattttggattacaatcttcagtttcactggtgataccatggatcagcaacacacacttcagaacagccaaaactggtggtaactatgactattacacagctggtgtggtgacattatggtatcaaacaaattatgtagtcccgcctgagacgcccggagaggcttacattatcgccatgggggctgctcaagacaacttcaccttgaagatatgtaaagacacggatgaggttacccaacaagctgtcttacaaggcgacccc--------gtggaggacatcatcc---acgacgcttt--------------------------gagcagcactgtgcggcgggccataactagtggtcaagatgtca--------acacagcggccggtaccgctcctagctctcacaggttggagactggtcgtgttcccgccctacaagcagcagaaactggagccacttctaacgctacagatgagaacatgatagaaacgcggtgtgtcatgaacagaaatggagtgttggaggcgactataagtcatttcttctcacgctcaggtttggtgggtgttgtcaatctaactgacggaggcaccg----atacaacgggatatgcagtgtgggacattgacatcatgggttttgtgcaactgcggcggaaatgtgagatgttcacatacatgagattcaacgctgagttcacattcgtcactacaacagaaaatggcgaggcaaggccatttatgttacagtatatgtatgtacctccaggtgcccctaagccaacgggtagagatgcttttcagtggcaaacagcgacaaatccatccgttttcgttaagctcacagatccacctgctcaggtatcagtccccttcatgtcacctgctagtgcctaccaatggttctatgacgggtatccaacatttggacaacacccggaaacatctaatacaacatatggacagtgccctaacaacatgatggggacctttgctgtgagagtagtgagtagagtggctagccagctcaaactacagacacgagtgtatatgaagcttaagcatgtgagagcatggatccctaggccaataagatcccagccttacctcctaaagaattttccaaattatgatagtag----taagatcacatacagcgcaagagatcgtgccagcat---aa-------------------------------------------------------------------aacaagctaatatggga--------aagtttgggcaacagtctggggcaatatatgtgggtaattacagagtggtgaatagacacttggccacacataacgattgggtaaatctggtgtgggaggatagttctagagacttgctggtctcatctactacagcacaggggtgtgataccatagctcggtgcaactgtcagacaggtgtgtattactgtaactctcgtaggaaacactacccggtcagcttttccaaacccagcctgatatttgttgaagctagcgaatattacccagctaggtaccagtcacacctcatgcttgccgagggtcactcagaacctggtgactgtggtggcatcctcaggtgtcaacacggtgtggttgggttagtttccaccggtggaaatggcctcgtggggtttgctgatgtgagggacttactctggcttgatgaggaggctatggaacaaggagtgtctgactacatcaaa-ggtcttggtgatgcttttggcacgggcttcactgacgcagtgtccagggaagtggaagcattgaaaaatcacttgattggctctgagggggctgtcgagaaaatcttgaaaaacctggtgaagctaatttcagcattagttatagtcatcaggagtgactacgatatggtcactcttacagctacgcttgccctgatcgggtgccatgggagtccttgggcgtggatcaaatcaaagacagcttccatcttaggcatatccatggcacaaaagcaaagcgcctcatggctgaagaagttcaatgatatggcaaatgccgcaaaagggctcgagtggatctccaataagatcagcaagtttattgattggcttaaggagaagatcattccagctgctaaggagaaagtcgagttcttgaataacttaaagcaactccct-ctgttggaaaatcaaatttccaatctcgagcaatctgccgcctcacaggaagatctagaagctatatttggcaatgtgtcgtacctagctca---------tttttgccgcaagttccaaccactctacgcaactgaggccaagagagtctatgccctggagaaaagagtgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgcttgatcattagaggctctccaggtacgggaaaatcacttgccacaggtattatagctagagccattgctgataagtaccattccagtgtctattcgctccctccagacccagatcacttcgacgggtataaacaacaggtggtcacagtcatggacgatctctgccagaatccagacgggaaagatatgtccttgttctgccaaatggtctccacagtggactttataccacccatggcgtcactggaagaaaaaggcgtatccttcacctctaagtttgtcattgcatcgaccaacgctagcaacatcatagtccccacagtctcagactcagatgcaatccgcaggagattctatatggactgtgatatagaagtaactgactcttacaagacagatctcggtcgattggacgcgggtagagctgccaagctttgttcagagaataacactgctaacttcaaaagatgcagtccacttgtgtgtggcaaagccatccaattgaaagataggaagtctaaggtcagatatagtgttgacactatggtatcagagctaatcagagagtacaacaatagatctgctgttggaaacaccatagaagcactcttccaagggccccccaagttcagacctataagaatc---agcctcgaggagaagccaacaccagatgctatcagtgaccttctcgctagtgttgatagcgaagaggtccgacagtattgc-agagagcaagggtggataatcccagaaacaccaaccaacgtggaacgacacctcaatagagcagttctggtaatgcagtccattgctaccgtagttgcggttgtgtcccttgtgtatgtcatttataaactgtttgccggatttcaaggtgcctactctggagcacccaagcaggcgctcaagaagcctgtgctaagaacagctactgtccaaggacctagcttggacttcgctttgtctcttctgaggcgcaacatcagacaagcgcagaccgaccagggacacttcaccatgctaggcatacgggaccgtctagccatcttgccacgccactcacaaccagggaagaccatctggatagagcacaaattggtcaacgtactagatgcagttgagttggtggatgagcaaggtgttaatttggaactcacgctggtgaccttggacactaatgagaagtttagggacattaccaagttcatcccagagacaatagctggtgctagtgatgcaactctagttatcaacactgagcatatgccctcgatgtttgtgccaataggtgacgttgtgcagtatgggtttttgaatctcagtggcaaacccacacacagaactatgatgtacaatttccccacgaaagcaggacagtgtgggggggtagtcacttcagttggcaagatcattggaatccacattggcgggaatggacgccagggcttctgcgctggtttaaagaggagctactttgccagcgagcaaggagagatccagtggatgaagcccaacaaagagactgggaggctgaacatcaatggtccaacccgaaccaaactggaacctagcgtgttccacaatgtgttcgagggtaataaagagccagcagttctgaccagtaaagaccccaggcttgaggttgattttgaacaagccttgttctccaaatatgtgggcaacactctgcatgagcctgatgagtatgtgacacaagctgcccttcattacgcaaatcaattaaaacaactagacataaacaccagcaagatgagcatggaggaggcgtgctatggtacagaaaatttagaagctatagacctacacaccagtgctggatatccttatagtgccttgggtattaaaaagagggatattcttgatccggtcaccagggacacctccaagatgaaactatacatggacaagtatggactagatttaccctattcaacctatgtgaaggatgagcttaggtctctagataaaatcaagaaggggaaatctcgcttaattgaggccagcagcttgaatgattctgtctaccttagaatgacttttggtcatctttatgaggtgtttcacgccaacccgggaactataaccgggtctgcagtggggtgtaatcctgatgtgttctggagcaagttgccaattctactaccgggttcgctctttgcgtttgactactcaagctatgatgcaagtcttagtcctgtatggttcagagctttagaattggttttacgagagattggttactcagaggaggctgtgtcactcatagaggggattaaccacactcaccatgtgtatcggaataagacatactgtgtccttggtgggatgccttcaggttgctctggcacttccattttcaattccatgattaacaacataatcattagaactctcttgatcaagacgttcaaagggatagacttggatgaactaaacatggtggcctacggagatgatgtactggctagctacccatttcccatcgactgtttggagttggcgagaactggcaaagagtatggactgactatgactcccgccgataagtcaccctgttttaatgaagtcacctgggagaacgcaacctttttgaagaggggtttcctaccagaccatcagttcccttttctaatccaccctaccatgcccatgagggaaatccacgagtccattcgttggaccaaggatgcacgtaacactcaagaccacgtgcgttccctttgcttgttggcgtggcacaatggaaaggaggaatatgaaaaatttgtgagcacaatcagatcagttcctattggaaaagccttggcgataccaaattttgagaacttgaggagaaattggctcgaattgtttt--aa-acttacagctt-------------------------aaag---------------ctgaaccc-caccagaa----acctggt------c-g-----tgcaaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY421768.1_Human_coxsackievirus_A12_strain_Texas-12_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactctggtactacggtacctttgtgtgcct-g-ttttaag-----ccccta-cc---cccc--------actc-gtaacttagaagg------------cttctc-acactc-gatcaa-tagtaggtgtggcacgccagtcacaccgtga-tcaagcacttctg-ttaccccggtctgagtaccaataagctgc-taacgcggctgaaggggaaaacgatcgttatccggctaactacttcgagaaacc-cagtaccaccatgaacgttgcagggtgtttcgctcggca--caa-cccca---gtgtagatcaggtcgatgagtcaccgta-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcccat--------ggggtga-cccatgggacgctctaatactgacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatacccttaatcca-aaggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaattgaa-------aagttgttaccatatagctattggattggccatccgg--tgacaaatagagctattgta-----tatctt----tttgtt-ggttacgtacccc-----ttaatta--------------caaagtggtttca-actttgaaatacatcctaacactaaattgtagaaaa-------tgggagcacaagtctcgacacaaaggacagggtcacacgagactagcaacatcgccacag-aaggttccactataaactttactaacattaactattacaaggactcttacgcggcttcagctagtaggcaggacttcacacaggatccaaataagtttaccagccccattctagatgccttgcgggaagtggccccaccattgaaatcgccaagtgctgaagcgtgcgggtatagcgatcgtgtggctcaactaactgttggcaactcaaccatcaccacacaagaggccgcaaatattgtgatgggatacggggagtggccggaatactgcgcagatacggatgccacagcagtggataaacccactcgtccggatgtgtcagtaaaccgcttctacaccttatcagcaaagatgtgggataaaa------------------attcaaagggttggtattggaaattccctgatctactaacgcagaaaggagtgtttggacagaacgctcagtaccactatctatatagggctgggttctgcatacatgtgcagtgcaatgctagtaagtttcaccaaggtgccctactggtagccgccctaccagaacacgtggtggctgggatgggaccaggggacaagccacaaa---atgcaccacatccggagtatcaaaccacacaacctggagctggtgggcacgatctctcacatccctatgtactggactgtggtgtccccattagccagttattggtctgcccgcaccaatggattaatttgcggactaataactgtgccaccattataatgccatacactaatacagttccttatgattcagctatccatcacaacaattttacattgtttgttataccaatagcacccttgaactacgacacaggagccacgacagccattcccatcactattacggtcgctcctttgtgtgcggaattcgggggcttgaggcaggctgtattgcaaggaatccctatggagctgaagcctggaaccaaccagttcttgaccaccgacgacgagatttcggccccaattttaccaggatttaatgcaacacccatgatccacattcctggggaggtgaccaacctgcttgagttatgtcagatagaaaccatattagaagtgaacaa----------------cgttactaacgtagacggc------atgcagagactcctgataccaatatctgctcagaccg------aagcagataaattgtgtgcttcattcagagtagacccggggagagatggaccgtgggaatcaactaccgttgggcagatatgccgttactatacccagtggtctgggtctctggaagtcacattcatgttcactgggtcttttatggctactggcaagatgttgattgcatacaccccacccgggggccaacagcctgctactagagatatcgccatgttagggactcacgttatttgggattttggtctacagtcttctgtcacactggttattccatggattagcaacacccactatagaactgtggaaaccgggggtatcctggattattattccacaggtgtagttactatatggtaccaaaccaacttcgtagtcccaaatggagcccctactagtgcatatatcatcgccatgggtgcagcacagaagaacttcacactaaaattgtgccgtgacacagagtccatatcacagacagctatactacaaggagataca--------gtgagtgatatgatcg---aaaattccat--------------------------caaccgaattaccagtgcaatttcc-------actacccagacacac----cagacagcagctgacactagagttagtacacacaggttaggcacgggggaggtgccagctttacaagcagcagagacaggtgccacctccaacgcaaccgacgagaacatgattgaaacacgctgtgtcgtcaacaggcacggggtgagcgagaccagcgtggaatacttcttctctcgctctggtttggcaggaatagtcatcgtggaggatgcaactgcca----ctaataagggttatgccacatgggagattgatgtcatggggttcgcgcaactgcgtcgcaagctggagatcttcacatacatgcgcttcgatgcagagttcacttttgtggcaacagaacgcaatgggagcaccagcccggtcatgatgcagtacatgttcgtgccccctggcgcccctgttccaacagggagagataccttccaatggcaatctgctactaacccttcagtgctagtaaaaatgacggatccaccggcccaagttgccatcccctttatgtctccagctagtgcataccaatggttctatgatggatatcctacctttggagaaagaccagttacaaccaacatgaattatggacagtgtcccaacaacaaaatgggaactttttgtatacgcactgtctccggtgaagcgtcagggaaaaacatcactatacgtatttttatgaggttgaagcatgtaagagcgtgggtgcctcgcccaattagaagccagctatatctgcttaaaaattaccccaactttgataacac----taagatcctcaacgcctcccacaacagagcttctat---cac----------------------------------------------------------------------atcaaacacaggg--------aggtttgggcaacaatctggggccatatacgttggcaattacagggtagtgaaccggcatctcgcaacacacaacgattgggcgaacttgatatgggaagacagtgctagggacctactggtatcttcaaccaccgcccaagggtgcgacaccattgctcgatgcaattgtcagactggagtgtactattgcaattctcgtaggaagcactacccagtcagcttttccaaacccagcctggtgttcgtcgaagccagcgagtactatccagccagatatcagtcacacctcatgttagctgagggacattcagagcctggagattgcggtggtatactcaggtgtcaacacggtgttgtgggaattgtatccactggagggaatggtctcgtagggtttgctgatgtcagagacctgctgtggcttgatgaggaagctatggagcaaggagtgtccgactacatcaaa-ggtcttggcgatgccttcggcacgggtttcactgacgcagtgtccagagaagtggaagcattaaaaaaccacttgatcggttctgagggagccgttgagaagatcttgaagaacctggtgaagctagtttcagcattagttatagtcatcaggagtgactacgacatggtcaccctcacagctacactcgccctaatcgggtgccatgggagtccatgggcatggatcaagtcgaagacagcttccatcctaggtattcccatggcgcagaaacagagcgattcctggctaaagaagttcaatgacatggcaaacgctgcaaaaggactcgagtggatctccaataaaatcagtaagtttattgattggcttaaggagaagattattccagccgccaaggagaaagtcgagttcctcaacaacctaaaacagctcccc-ttgttagagaaccagatctccaaccttgagcaatctgctgcttcgcaggaagatctagaggccatgtttggtaatgtgtcatacctcgctca---------cttctgccgcaaattccagccactctacgcagctgaggccaagagagtttacgccctggagaaaagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctaattatcagaggttccccaggaacgggtaaatcacttgctacaggcatcatagctagagccattgctgataaatatcattctagtgtttattcactccctcctgacccggatcacttcgacgggtacaagcagcaggtggtcacagttatggatgatctttgccaaaatccagatgggaaggacatgtctctattctgtcaaatggtttccacagtggacttcataccacccatggcatcactagaagagaaaggagtgtccttcacctccaaattcgtcatcgcatctaccaacgctagtaacatcatagtccccacggtctcagactcagatgcaatccgcaggaggttttatatggactgtgatatagaagtgacagactcctacaagacagaccttggtcgattggacgcgggcagggctgccaagctttgttcagagaacaacactgctaatttcaaaaggtgcagcccattagtgtgtggtaaagccatccaattgagggacaggaagtccaaagtcaggtatagtgttgacaccgtggtatcagagctaatcagagagtacaataatagatctactattgggaataccatagaagcactctttcaagggccccccaagttcagacccataagaatt---agccttgaagagaagccagcaccagatgccattagtgatttgctcgctagtgttgacagtgaagaggtccggcagtactgc-agggaacagggttggataattccagaaacaccaactaatatagaacgacacctcaatagagcagtcttggtgatgcagtccattgctaccgtagttgcggtagtgtctcttgtctatgtcatttacaagttgtttgccggattccaaggtgcttactctggagcacccaagcaaacactcaagaagcctgtgctgagaacggccacagtccaagggcctagcctggactttgctttgtcccttctgaggcgcaatatcagacaggcgcagaccgaccaggggcacttcaccatgctaggcgtgcgagaccgcttagcgatcctaccgcgccactcacaaccagggaaaaccatctgggtagagcacaaattggtcaacgtgctagatgcagttgaattggtggatgagcaaggtgttaacttagagctcacattggtgaccttggacactaatgagaaatttagggacgttaccaagttcatcccagagacaatcactggagcgagtgatgcaaccctagttatcaacactgagcacatgccctcaatgtttgtgccagtgggtgatgttgtgcagtatggattcttgaatctcagtggtaaacctactcacagaactatgatgtacaattttcccacgaaagcaggacagtgtggaggggtagttacctcagttggcaagatcattgggatccacattggcggaaacggacgccagggcttctgcgccggcttaaagagaagctactttgccagtgaacagggagagatccagtgggtgaaacctaacaaagaaaccgggagattaaatatcaatggtccgactcgaaccaaactagaacccagtgtgttccatgatgtatttgagggcaataaggagccagcagttctaaccagcaaagatcctaggctagaggttgattttgagcaagctctgttctctaagtacgtgggcaacactctacacgaacctgatgagtatgtgacacaagctgccctccattatgcaaatcagctgaaacaactagacataaacaccagcaagatgagcatggaggaggcgtgttatggtacagattatttggaagcaatagacctgcatactagtgctggatatccttatagtgccctgggtattaagaagagagatatcctcgatccagttaccagggacacctccaagatgaagttgtacatggacaagtatggattggatttgccctactccacttatgtaaaggatgagctaagatctttagacaaaatcaagaaaggaaagtctcgcttaattgaggctagtagcttaaatgactctgtctaccttagaatgacttttggccatctttatgaggtgtttcacgccaacccaggaaccataactggatctgcagtcgggtgtaatcctgatgtgttctggagtaagctgccaatcctactgccgggctcgctctttgcatttgactactcagggtatgacgcaagccttagtcctgtgtggtttagagctctagagttggttctgcgggagattggttacactgaggaggctgtatcactcatagaaggaataaaccacactcatcacgtttaccggaacaagacatactgtgttcttggtgggatgccctctggttgctctggtacttctattttcaattccatgattaacaatataatcatcagaaccctcttgatcaagacgttcaaaggtatagacttggatgaactgaacatggtggcctacggagatgatgtgttggccagctacccatttcccattgattgcttggaagtggcaaaaaccggcaaggagtacggattgaccatgactcctgccgataaatcaccctgtttcaatgaagtcacctgggagaatgcaactttcttaaaacggggtttcttgccggatcaccagtttccatttctaatccaccccaccatgcccatgagggagatccatgagtctatccgttggaccaaggatgcacgcaatactcaagaccatgtgcgttccctttgcttgttggcatggcacaatgggaaggaggagtatgaaaaatttgtgagtgcaattaggtcagttcccattgggaaagctttggcaataccaaattttgagaacttgagaagaaattggctcgaattatttt--aa-acctacagctc-------------------------aaag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgtaaat-g-actg--------gtgggggtgagtttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY421761.1_Human_coxsackievirus_A3_strain_Olson_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactggtattacggtacctttgtgcgcct-g-ttttata-----ccccc---c---ccaa--------cctc-gaaacttagaagt------------aaagca--aaccc-gatcaa-tagcaggtgcggcgcaccagtcgcatcttga-tcaagcacttctg-taaccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-cagtagcatcatgaaagttgcagagtgtttcgctcagca--cta-ccccc---gtgtagatcaggccgatgagtcaccgcacttccccacgggcgaccgtggcggtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaatacggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatacccttaatcca-aaggg-cagtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---aatttt-tactggctgcttatggtgacaattgag-------gaattgttgccatatagctattggattggccatccgg--tgactaacagagctattgtg-----ttccaa----tttgtt-ggatttaccccgc-----tcacact--------------cacagtcgtaaga-acccttcattacgtgttatttctcaactcaagaaaa-------tgggcgcccaagtgtccacccagaagacaggatctcatgagaccggaaacatagctacag-aaggttccaccatcaacttcactaatatcaactattatagagattcctatgccgcatctgcatcgcgacaagagttctcacaagaccccacaaaattcacaagcccggtgttagacgttttgagggaagcagccccacccttgaaatcaccatctgttgaggcgtgtggatatagtgatagagtagcacagttgaccgtgggcaattcaacaataactacacaagaggcagcgaatatagttcttggatatggtgagtggcccgactactgcccagacacagatgctactgctgttgacaaacccactaggccagatgtttctgtcaatcggttttacaccatgtcgacgcaaatgtggcaggaat------------------catcgaaagggtggtattggaaattccctgatgtgttgaacaaaacaggtgtgtttggacagaatgcacaatatcattacctgtatagatcgggattctgtatccacgttcaatgcaacgcaagcaaatttcaccaaggagctcttctagtggtagccatccccgaatttgtcatagcagctgcaagccctgaaaagaaacccacca---ccgctccccatccgacattcgacaagactatgcctgggtcaaatggttccactttcgagcacccttacgtgctcgatgcgggtattcccctcagtcaggcgcttatattccctcaccaatggatcaacttgagaactaataactgtgctaccataattatgccttacattaatgcggttccttttgactcagccataaaccataacaacttcactttagcagtgatcccaattagccctctcaagttttgcgatggtgccacgtccgcaatacctatcactattacattagccccattgagttcagaattttgtgggttacgtcaagccacgaagcaaggatttccaactgagttgaagcccgggactaatcaatttttgaccacagaccagtgtgtgtctgcacctatattaccagggtttgagcccacgccccaaattcacattcctggagaggtgagtagtcttctagaactgtgccaggtcgaaaccatattggagatcaataa----------------tgtcaccggaacgcccgat------gtcacaagactgctcattcccgtctctgcacagaaag------ataaagatacactgtgcgcggcgttccgtgtggacccaggtagagatggcccttggcaatcaacccttgttgggcaaatatgcaggtactacacccaatggtcgggctctctggaagtgacattcatgtttactggatccttcatggccacgggcaagatgctcatagcatattccccacctggtagcgcccagcccacctccagggagttcgcaatgcttggcacgcacgtggtttgggattttgggttgcagtcctcagtcactctggtcataccatggattagcaacacacattaccgcactgggaagactggcggctattatgactactacgcgtcaggtattgtcaccatctggtaccagacgaattttgtggtcccctctggcacaccaacacaagcttacataatagcccttggcgcagcgcaaaagaatttcactctgaaactatgcaaggacaccgatgaggtgacacagcaggcgatcttgcagggagatcca--------gtggaagacttaatcg---ccaatacagt--------------------------tgctaggactctagagagaataac--------ctctccaactcataa---tacaacggcaggcaacaccaccgttagcgagcacagcatcggtaccggttcagtgcctgcgttgcaagctgctgagactggggcttcgtctaacaccacagatgagagtatgatagaaacacggtgtgttgtcaataggaatggagtgattgagactagcatcaaccatttcttctcccgagcggggcttgtgggagtgctgaacatacttgatggaggcacc-------tcaaaaggctttgaagtttgggatatagacatcatgggctttgttcagcttcgcagaaagctagagatgttcacctacatgcggttcaacgctgaattcacctttgtcgcgactttgagtgacggaacaactccccatataatgttgcaatacatgtatgtgccccctggagctcccaaacctcaggaaagagattcattccaatggcagactgcaaccaacccatccgtgtttgcgaaaatgagtgaccctcctccgcaagtttcagtacctttcatgtctcctgctagcgcctaccagtggttttatgatgggtacccaacatttgatgatagaccacagacctctaatcgtccctacggacaatgccccaataacatgttgggcacattcgcggtgcgcattgttagcaagacgcctgcggagagagacttgcgcgtccgtgtttacatgaaactgaagcatgtgcgagcatgggtaccgcgacccataaggtcacagccttacgtcttgaagaactaccccaactatgatggaac----ccaaatcgtgcccagtgccaaagatcgagaagacat---aaagaa---------------------------------------cacaggg------------------------------------------aagtttggacaacaatcgggtgctatatacgtgggtaattacagagtggtgaatagacacctcgccacccacaacgattggactaatctagtgtgggaggacagtaccagagatttattagtatcgtccactacagcacagggttgcgacaccatcgctcggtgcaactgccaaacgggggtatattattgtaactcccgtagaaagcactatccagtcagtttttctaaacctagcctgatatttgtggaggctagtgagtactacccagctagataccaatctcatctcatgcttgctgagggccattcagaacccggtgattgtggcggcattctcagatgtcagcatggtgtggtgggaatagtctctactggtgggaatggtcttgtgggattcgccgatgttcgagaccttttgtggttagatgaagaagcaatggagcagggagtgtctgattacatcaag-ggtctcggtgatgcctttggcacgggcttcactgatgcagtatccagagaagtggaagcacttaagaaccacctgattggttctgagggggctgtggataaaatattgaagaatttggtgaaacttatttcagccttggttatagtcattaggagcgactatgatatggtcaccctcacagccactcttgccctgattgggtgtcatgggagcccatgggcttggatcaaatcaaagacagcttccatcctaggtattcctatggcacaaaagcaaagcgcctcctggctaaagaaattcaatgacatggctaacgctgcgaagggcctcgaatggatctctaataaaatcagtaagtttattgactggctcaaagagaaaatcatcccagctgctaaagagaaagttgagtttttgaataacctaaagcaacttccc-ttactggaaaatcaaatctccaatctcgaacaatctgctgcctcgcaagatgacctcgaagttatgtttggcaacgtatcgtatttagctca---------cttttgccgcaagtttcaaccactttatgcaactgaggccaagagagtttatgccttggagaaaagaataaacaactacatgcagttcaagagcaaacaccgtattgaacctgtgtgtttaatcatcaggggatccccaggaacagggaaatcactcgccacgggcattatagctagagctattgctgacaagtaccattccagcgtctactcgctccctccagatccagatcacttcgatgggtacaagcaacaggtggtcacagtaatggatgatctttgccagaatccagatggaaaggacatgtccctgttttgtcagatggtttccacagtagatttcataccacctatggcgtcgctagaggaaaaaggagtgtccttcatctctaaatttgtcatcgcatcgaccaacgccagcaacatcatagtccccacagtttctgactcagatgcaatccgcaggaggttttatatggattgcgacatagaagtgacagactcctacaagacagatctcggccggttggacgcaagcagggctgctaagctttgctcagagaacaacactgccaacttcaaaagatgcagtccattagtgtgtggtaaagccatacagttgagggacaggaagtccaaagtcagatacagtgttgacactgtggtgtcagaactaatcagagagtacaacaataggtctgccgttggaaacaccatagaagcactctttcaaggacctctcaagttcaggcctataagaatt---agccttgaagagaagccagcgccagacgccattagtgacttgctcgctagtgttgatagtgaagaggtccggcagtactgt-agagaacaggggtggataatcccagaaacaccaactaatgtggagcgacaccttaatagagcagtcttagtgatgcaatccattgctaccgtggttacagttgtatcccttgtttacgtcatctacaagttgtttgctggctttcaaggtgcttattctggggcgcccaagcaaacgctgaagaagcctgtgttaagaacagccacagttcaaggacctagtttggactttgctttgtctctcttgaggcgcaacatcaggcaggtgcagactgaccagggacacttcaccatgcttggtgtacgagaccgtctagccattctgccacgccactcacaaccagggaaaactatctgggtagagcacaaattgaccaacgtgctagacgcagttgaattggtggatgagcagggtgtcaacttagagctcactctggtgactttggacaccaacgaaaaatttagggatatcaccaagttcatcccagagacaatcactggggcgagcgatgcaaccctagttatcaatactgagcacatgccctcaatgtttgtaccagtaggtgacgttgtacaatatgggttcttgaatctcagtggtaaacctactcatagaaccatgatgtataatttccctacgaaagcaggacagtgtgggggagtggtcacttcagtcggtaaggtcatcggaatccacattggcggaaatgggcgccagggcttttgtgccggcttgaagagaagttactttgccagtgaacaaggagagatccagtgggtgaaacctaacaaagaaactggaaggttgaacatcaatggtccaacccggactaaactagaacccagtgtgttccatgatgtgttcgaaggcaacaaggaaccggcagttttaaccagcaaagaccctaggctagaggttgattttgaacaagctttgttctctaagtatgtgggcaacactctgcatgatcctgatgaatacgtgacacaagctgccctccactatgcaaatcagctgaaacaattagatattaatactaataagatgagcatggaggaagcgtgttatggaacagaatacttagaagctatagacctgcacactagtgctggatacccttatagtgccctgggcattaagaaaagagatattcttgacccaatcaccagagatacctccaagatgaaactgtacatggataagtatgggttggacttgccctactccacttatgtgaaggatgagctcagatccctagacaaaatcaaaaagggaaagtctcgcttgattgaagccagcagtctaaatgattccgtttaccttagaatgacatttggccacctttatgaagtgtttcacgccaacccggggaccgtaactggatccgcagttggatgcaatcctgatgtgttttggagtaagttaccaatcctattgccaggctcgctttttgcattcgactactcagggtatgacgcaagccttagtcctgtgtggtttagagctttggagttggtcctgcgagaaattggttacccggaggaggctgtgtcgcttatagaagggatcaatcacactcaccatatatatcggaataaaacatactgtgttcttggcgggatgccctcgggttgctctggcacttccattttcaattccatgatcaacaacataatcatcagaacccttttgattaaaacgtttaaagggatagatttggatgaactgaacatggtggcctacggagatgatgtgttggctagttacccgttccccattgattgcttggaattggcgagaactggcaaggagtacgggctgactatgactcctgccgataaatcaccctgtttcaatgaagtcacttgggagaatgcgactttcttaaaaaggggtttcttgccagatcaccagtttccttttctaatccatcctacaatgcccatgagggaaatccatgaatccatccgttggactaaggatgcacgcaacactcaagaccacgtgcgctccctttgtttactggcatggcatantgggaaagaagaatctgaaaagtttgtgagcacaattagatcagttcccattggaaaagctttggcaataccaaattttgagaacttgagaagaaattggctcgaattatttt--aa-acttacagctt-------------------------aaag---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgtaaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064282.1_Coxsackievirus_A6_strain_SHAPHC6029/SH/CHN/15_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---t-cc-c---a-aaact-gtaacttagaaga------------atagcactttatc-gatcaa-tagcaggcatggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tactcg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgcacagtccaa-actctaaagtatattctgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctggatcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaagactcctatgcagcatcagctagtaggcaggattttgcacaagatcctgctaagttcacacgccctgtcttggataccatcagggaggttgcagccccgctgcaatccccttctgttgaggcgtgcggctatagtgatcgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaatagattctacacgctgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagttttcggtcaaaacgctcaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggtgccctcttagtggctgcaatccctgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaaggattgtacccagattttgctcatactaacccaggtaaaaatggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtctacccccatcaatggattaatttacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccgtttgattcagcgcttaaccactcaaattttggattagttgtgattcctattagccctttaaaatattgcaatggagctaccacagaagtaccaatcacactaactattgccccacttagttcggagtttagcggcctccgacaggcaataaaacaagggtttcccacagagctcaagcctgggactaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgtcagatagaaaccatactagaagtcaataa----------c------accaccggcactaccggg------gtcagtaggttactaatccccgttcgagcgcagaaca------atgtggaccagttatgtgcatcattccaagtggaccctgggcgcaatggtccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacccggtagtgctcagcccgctacaagggaagcagcaatgctcgggacgcatatagtgtgggactttggtttgcagtcatcggtcaccctagttataccttggattagcaacacccatttcagagcagttaagactggaggggtatacgactactatgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagacacccccactgaggctaacatcatagctcttggagcggcacagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacggcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaagtgctgttagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagctaacaccgcagttagtacccactccctgggcacagggcgtgtaccagcactgcaagctgcggaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtatacaatttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagttgtcaacatacatgcgatttgatgccgagttcacttttgtgtccaacctcagtgatagcacaacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtatttgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaactgtcagtgaatctaccaccgggaaaaacatccatgttcgggtgtacatgagaatcaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccgcaaagaacatctggt------------------------------------------aagtttggtcaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcgtaatgattgggcaaatttagtgtgggaaagtagctcacgagatctcctggtgtcttccactactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacattacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtggtggactcgtcgggtttgcagatgtcagagaccttttgtggttggatgaagaagccatggaacaaggtgtatcagattatatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactacctcataggatctgaaggggccgttgaaaagatcttgaagaacttgattaaactgatctcggcactagtcatagtgatcagaagtgattacgatatggtcaccctaacagcaaccctagccctaataggttgccatggtagtccttgggcttggatcaaagctaaaacagcatctatcttaggtattcctattgctcaaaaacagagcgcctcttggcttaagaagttcaatgatatggccagtgctgctaagggattggaatggatttctagcaagattagtaaattcattgactggcttaaagagaagatcataccagcagccagggagaaggttgagttcttgaacaacttgaaacagctacct-ctactagagaaccagatctcaaacctagagcaatctgctgcctcacaagaggatcttgaagtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaagttccaaccactgtacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggcacagggaagtctctagcgactggtatcattgcccgcgcgatagctgataaataccactctagtgtgtactcactcccaccagatcctgaccactttgacggctataagcagcaagtggttactgttatggatgacctatgtcaaaaccctgacggtaaggacatgtcactattttgccaaatggtgtccaccgttgacttcatcccaccaatggcttccctcgaggagaaaggagtttctttcacatccaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtatccgattctgatgccattcgccgcagattttatatggattgtgacattgaagtgacagactcatataagacagacctgggtaggttggacgctggacgagcggccaaattgtgttctgagaacaacacagcaaatttcaagcgttgcagcccgctagtatgtggaaaagccattcagttgagagacaggaaatccaaggtcagatacagcgtggatacagtgatctctgaactcataagagagtacaataacagatccgccattggcaatacaattgaagctttgtttcagggcccacccaagtttagacccattagaatc---agtcttgaggaaacaccagctcctgatgccattagtgatctccttgccagcgtagatagcgaagaggtacgtcagtactgt-agagatcaaggttggattatcccggaaactcctacaaatgttgaacgacacctcaacagagctgtgttagtcatgcaatccatcgccacggtagtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactctggcgcccccaagcaagcgctcaagaaacctgttcttcgcacagcaacagtgcagggtccaagccttgactttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctgggtgtcagagaccgcttggctgtcctcccgcgacattctcaacctggaaagaccatctgggtggagcataagcttgtgaatgttctagatgctgttgagttagtggacgaacagggggttaacctggagctgactttaattacccttgacactaatgagaaattcagggatatcaccaaatttattccggaaagcatcagtggtgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtaccagtaggtgacgttgtgcagtatggcttcttgaatctcagtggaaaaccgactcaccgtactatgatgtataactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttattggcattcacataggaggcaatggcaggcaagggttctgtgcgggactcaagagaagctactttgctagtgaacagggagagatccaatgggttaaacccaacaaggaaacagggagatttaacatcaatggaccaactcgcaccaagttcgaacctagtgtgtttcacgacgtctttgagggcaacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggattttgagcaagcattgttctctaagtacgtggggaacacactacacgagcctgatgagtacatcaaagaggcagccctccactacgcaaatcagttaaaacagttaagtataaacacctctcagatgagcatggatgaggcttgctatggcacagaaaatcttgaggccattgaccttcacaccagtgcgggatatccctacagtgcgttgggaataaagaagagggatatcttagaccccactaccagagatgtgagtaagatgaagttctacatggataagtatggtcttgatctcccttactccacctatgttaaggatgagcttcgctcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttatcttagaatggcctttggacacctctatgaaaccttccatgcaaatcctggaactgtgaccggctcagctgtgggttgcaatccagatgtgttttggagtaaactgccaatcctacttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagtttggttcagagcgttggaagtggtccttagagagataggttatagtgaagaggcaatctcactcattgaagggatcaaccacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaggttaattggggaaacgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgtaatactcaagaacacgtgcgatccttatgcctattggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccagtagggaaagcattggcaattcccaattatgaaaatctgaggcgcaattggctcgaattatttt-----agaggttaaat-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgaatat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064286.1_Coxsackievirus_A6_strain_SHAPHC6084/SH/CHN/15_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcacactgactctacggaatctttgtgcgcct-g-ttttata-----acccc---t---t-cc-c---a-agact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtaatcctccggcccctgaatgcggctaatcctaactgcggagcgcacgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatactggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtacagtccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgctcaagtctcaacagaaaaatctggatcgcacgagacgaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaagactcttatgcagcatcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgccctgttttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggctatagtgatcgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgccacagctgtggataagcctactcgccctgatgtgtcggtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccaccagggggctctcttagtggctgcaatccccgagtttgtggttgctgcaagcagccctgctacgaagcccaatggacaaggattgtacccagattttgctcatactaacccaggcaaaaatggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaggcattggtttacccccatcaatggatcaatttacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgctcaaccactcaaattttggattggttgtgattcctattagccctttaaagtattgcaatggagctaccacagaagtgccaatcacactaactattgccccacttagttcggagtttagcggcctccgacaggcaataaaacaagggttccccacagagctcaagcctgggactaatcaatttcttacaactgatgacgggacatccccaccaatattacctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcagatagaaaccatactagaagtcaataa----------t------accaccagcactactggg------gtcaataggttactaatccccgttcgcgcgcagaaca------atgtagaccagttatgtgcatcatttcaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcaaatctgtaggtattacactcaatggtctggttcccttaaggtgacctttatgttcacaggttctttcatggctacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgccacaagggaagcagcaatgctcgggacgcatatagtgtgggattttggtttgcagtcatcggtcaccctagttataccttggattagtaacacccattttagagcagttaagactggaggagtgtacgactactacgcaactgggatcgtcaccatttggtaccaaaccaatttcgtggtgccaccagacacccccactgaggctaatattatagcccttggagcggcacagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaagtgctgttagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagttagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcggaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggagcacttttactctcgcgcagggctggtaggagttgtggaggtaaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcagtgatagcacaacacccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcgtaccaatggcagactgctactaacccatcggtattcgcaaaattgagtgatccacccccccaggtgtctgtaccgttcatgtcgccagcaacagcttatcagtggttttatgatggataccccacatttggcgagcacaaacaagctaccaatctgcaatatgggcagtgccctaacaacatgatgggccattttgccattcgaactgtcagtgaatctaccaccgggaaaaacatccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccaacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacagagaacatctggt------------------------------------------aagtttggtcaacaatccggggctatctatgtaggtaactttagagtggtgaaccgacatctcgctactcacaatgattgggcaaatttggtgtgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctaggaggaagcactacccggttagtttttctaagcctagccttgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgagcccggtgactgtggtggtattcttaggtgccagcatggcgtgattggtatcgtgtctactggtggtggtgggctcgtcggatttgcagatgttagggaccttttgtggttggatgaagaagccatggaacaaggtgtatcagattatatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtcaagggaagtggaagctcttaagaactaccttataggatctgaaggggccgttgaaaagattttgaagaacttgattaaactgatctcggcactagttatagtgatcagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacagcatctattttaggcattcctattgctcaaaaacagagcgcctcttggcttaagaaattcaatgatatggccagtgctgctaagggattggaatggatttctaacaagattagtaaatttattgactggctcaaagagaagatcataccagcagccagggagaaggttgagttcctaaacaacttgaagcagctacct-ctactagagaaccagatctcaaacctagagcaatctgctgcctcacaagaggatcttgaagccatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaattccagccactgtacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggcacagggaaatctctggcgactggcatcattgcccgcgcgatagctgataaatatcactctagtgtatactcactcccaccagatcctgaccactttgacggttataaacagcaagtggttactgttatggatgatctatgtcaaaaccctgacggtaaggacatgtcactattttgccaaatggtgtccaccgttgacttcatcccaccaatggcttccctcgaggagaaaggggtctctttcacatccaagtttgttatcgcatccaccaatgccagcaacatcgtagtgccaacagtatccgattctgatgccatccgccgcagattttatatggattgtgatattgaagtgacagactcatataggacagacctgggtaggttggacgctggacgagcggccagattgtgttctgagaacaacacagcaaatttcaagcgttgcagcccgttagtatgtggaaaggctattcagttgagagacaggaaatccaaagtcagatacagcgtggatacagtgatctctgaactcataagagagtacaataacagatccgccattggtaacacaattgaagctttgtttcagggcccacccaaatttagacccattagaatc---agtcttgaagaaacaccagctcctgatgccattagtgatcttcttgccagcgtggatagcgaagaggtacgtcagtattgt-agagaccaaggttggattatcccggaaactcctacaaatgttgaacgacacctcaacagagctgtgttagtcatgcaatccatcgccacggtagtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagcgctcaagaaacctgtccttcgcacagcaacagtacagggtccaagccttgactttgccctgtcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctgggtgtcagggatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttggagctgactttaattacccttgacactaatgagaaattcagggatatcaccaaatttattccggaaagcatcagtggtgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtaccagtaggtgacgttgtgcagtatggcttcttgaacctcagtggaaaaccgactcaccgtactatgatgtataactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttattggcattcacataggaggcaatggcaggcaagggttttgtgcgggactcaagaggagttactttgccagtgaacagggagagatccaatgggttaaacccaacaaagaaacaggaagacttaacatcaatggaccaactcgcaccaagttcgaacctagtgtgtttcatgacgtctttgagggcaacaaggaaccagcagttttgcacaataaagaccctcgccttgaggtggatttcgagcaggcattgttctctaagtacgtggggaatacactacacgagcctgatgagtacatcagagaggcagctctccactacgcaaatcagttgaaacagttaaacataaacacctctcagatgagcatggatgaagcttgctacggtacagaaaatcttgaggctattgatcttcacaccagtgcgggatatccctacagtgcgttaggaataaagaagagggatatcttagaccctactaccagagatgtgagtaagatgaagttctacatggataagtatggccttgacctcccttactccacctatgttaaggatgagcttcgctcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgattcggtttaccttagaatggcctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggttcagctgtggggtgtaacccagatgtgttttggagtaaactgccaatcctacttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagtttggttcagagcgttggaaatggtccttagagagataggttatagtgaagaggcagtctcactcattgaagggatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaggttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttttgattcatcctaccatgccaatgaaggagattcatgagtccattcggtggaccaaggatgcgcgcaatactcaagatcacgtgcgatccttatgcctgttggcgtggcacaacggcaagcaagagtatgaaaaatttgtgagcacaattagatctgtcccggtagggaaagcattggcaattcccaattacgaaaatctgaggcgcaattggctcgaattatttt-----agaggtcaaac-------------------------acac---------------ctcaaccc-caccagca----atctggt------c-g-----cgaacac-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064287.1_Coxsackievirus_A6_strain_SHAPHC5881/SH/CHN/15_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-c-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---t-cc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggtataccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccgttgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctgt--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcactaa--------------ttgtacagtccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctggatcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaagactcttatgcagcatcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgtggctatagtgatcgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgccacagctgtggacaagcctactcgccctgacgtgtcggtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtatcgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttggtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaaggattgtacccagattttgctcatactaacccaggtaaaaatggtcaagagttccgagatccttatgtcttggacgctggggtccccctaagtcaagcactggtttacccccatcaatggatcaatttacgaactaataactgcgcaaccattattatgccatatgttaacgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttaaaatattgcaatggagctaccacagaagtaccaatcacactaactattgccccacttagttcggagtttagcggcctccgacaggcaataaagcaagggttccccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcagatagaaaccatactagaagttaataa----------t------accaccggcactaccggg------gtcagtaggttactaatccccgttcgagcgcaaaaca------atgtggaccagttatgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcaaatctgtaggtattacactcaatggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgttgatagcctacacaccacctggtagtgctcagcccgccacaagggaagcagcaatgctcgggacgcacatagtgtgggattttggtctgcagtcatcggtcaccctagttataccttggattagcaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtggtgccaccagacacccccactgaggctaacatcatagctcttggagcggcacagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attacaaatgcagtgg---aaagtgctgttagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcggaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgtaacggggttaatgaggcgagtgtggagcacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggtactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaattagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcagtgatagcacaacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccagatagcaggaaatcataccaatggcagactgctactaacccgtcggtgttcgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggctaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaacaacatgatgggccattttgccatccgaactgtcagtgaatctaccactgggaaaaacatccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaactcacagagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcacaatgattgggcaaatttagtgtgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtctttgtggaagctagtgagtattaccctgccaggtaccagtcgcacctcatgcttgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaggaagccatggaacaaggtgtatcagactatatcaaa-gggctcggtgatgcattcggaactggtttcactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggccgttgagaagatcttgaagaacttgattaaactgatctcggcactagtcatagtgatcagaagtgactacgatatggtcaccctatcagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacagcatctatcttaggtattcccattgctcaaaagcagagcgcctcttggcttaagaaattcaatgatatggccagtgctgctaagggattggaatggatttctaacaaaattagtaaattcattgactggctcaaagagaagatcataccagcagccagggagaaggttgagttcttaaacaacttgaaacagctacct-ctactagagaaccagatttcaaacctagagcaatctgctgcctcacaagacgatcttgaagtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaattccagccactgtacgctacagaagctaagagagtttacgccctagagaagagaattaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggtacagggaagtccttggcaaccggcatcgttgcccgagcaatagctgataaatatcactctagtgtgtactcactcccaccagatcctgaccactttgacggctataagcagcaagtggttactgtcatggatgacctatgtcaaaaccctgacggtaaggacatgtcactattttgccaaatggtgtccaccgtcgacttcattccaccaatggcttccctcgaggagaaaggggtctctttcacgtccaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtatccgattctgatgccatccgccgcagattttatatggattgtgacattgaagtgacagactcgtataagacagacctgggtaggttggacgctggacgagcggccaaattgtgttctgagaacaatacagcaaatttcaagcgttgtagcccgctagtatgtggaaaggctattcagttgagagacaggaaatccaaggtcagatacagcgtggacacagtgatctctgagctcataagagagtacaataacagatccgccattggcaatacaattgaagctttgtttcagggcccacccaagtttagacccattagaatc---agtcttgaggaaacaccagctcctgatgccattagtgatctccttgccagcgtggatagtgaagaggtacgccagtactgt-agagatcaaggttggattatcccggaaactcctacaaatgttgaacgacacctcaacagagctgtgttagtcatgcaatccatcgccacggtagtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagcgctcaagaaacctgttcttcgcacagcaacagtacagggtccaagccttgattttgctctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctgggtgtcagagatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggaacataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttggagctgactttaattacccttgacactaacgagaaatccagggatatcaccaaattcattccagaaaacatcagcggtgctagtgacgccaccctagtgatcaatacagaacacatgccttcaatgtttgtactagtaggtgacgttgtgcagtatggcttcttgaatctcagtggaaaaccgactcaccgtactatgatgtacaactttcctaccaaggcaggacaatgtgggggtgtggtcacatcagttgggaaggttattggcattcacataggaggcaatggcagacaagggttctgtgcgggactcaagagaagctactttgctagtgaacagggagagatccaatgggttaaacccaacaaagagacagggagacttaacatcaacggaccaactcgcaccaagttcgaacctagtgtgtttcatgacgtctttgagggtaacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctctaagtacgcggggaacacactacacgagcctgatgagtacatcagagaggcagccctccactacgcaaatcagttaaaacagttaagcataaacacctctcagatgagcatggatgaggcttgctatggcacagaaaatcttgaggctattgaccttcacaccagtgcgggatatccctatagtgcgttaggaataaagaagagggatatcttagaccccactactagagatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactccacctatgttaaggatgagctccgctcgatagacaagattaagaaagggaagtctcgcctgattgaagccagcagtttgaatgactcggtttaccttagaatggcctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagtaaactgccaatcctacttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagtttggttcagagcgttggaaatggtccttagagagttaggttatagtgaagaggcaatctcactcattgaagggatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaacttaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtctaactatgactcctgcagataagtccccttgcttcaatgaggttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggacgcgcgtaacactcaagatcacgtgcgatccttatgcctgttggcgtggcacaacggcaagcaagagtatgaaaaatttgtgagcacaattagatctgtcccagtagggaaagcattggcaattcccaattacgaaaatctgaggcgtaattggctcgaattatttt-----agaggataaac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289374.1_Coxsackievirus_A6_isolate_CV-A6/P278/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctacggaacctttgtgcgcct-g-ttttaca-----acccc---t---c-cc-c---g-aactc-gcaacttagaaga------------atagcacgctatc-gatcaa-tagcaggcatggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------aaattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggcttcgttccac-----tcaccaa--------------tcgtacagtccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctggatcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattattataaagactcttatgcagcatcagctagtaggcaggattttgcacaagatcctgcaaagtttacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggctatagtgatcgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcggtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgttcgggtttctgcatgcatgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaaacctaatggacaaggattgtacccagattttgctcatactaacccaggaaaaaatggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatttacgaactaataactgcgcaaccattattatgccgtatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttaaaatattgcaatggagctaccacagaagtgccaatcacactaactattgccccacttagttcggagtttagcggcctccgacaggcaataaaacaagggtttcccacggagctcaagcctgggactaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgtcagatagaaaccatactagaagtcaataa----------t------accaccggcactaccggg------gtcagtaggttactaatccccgttcgagcgcagaaca------atgtggaccagttatgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcaaatctgtaggtattacactcaatggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgccacaagggaagcagcaatgctcgggacgcatatagtgtgggattttggtttgcagtcatcggtcaccttagttataccttggattagcaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtggtgccaccagacacccccactgaggctaacatcatagctcttggagcggcacagaagaacttcaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaatgcagtgg---agagtgctgttagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagttagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcggaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggagcacttttactctcgtgcagggctggtaggagttgtggaggtaaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacaagcgctttgatgccgagttcacttttgtgtccaacctcagtgatagcacgacgcccgggatgctggctcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggctaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaactgtcagtgaatctaccaccgggaaaaacatccacattcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcacaatgattgggcaaatttagtgtgggagagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaggaagccatggaacaaggtgtatcagattatatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggccgttgaaaagatcttgaagaacttgattaaactgatctcggcactagtcatagtgatcagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacagcatctatcttaggtattcccattgctcaaaaacagagcgcctcttggcttaagaaattcaatgatatggccagtgctgctaagggattggaatggatttctaacaagattagtaaattcattgactggctcaaagagaagatcataccagcagccagggagaaggttgagttcttaaacaacttgaaacagctacct-ctactagagaaccagatctcaaacctagagcaatctgctgcctcacaagaagaccttgaagtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaattccagccactgtacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggcacagggaagtctctagcgactggcatcattgcccgcgcgatagctgataaatatcactctagtgtgtactcactcccaccagatcctgaccactttgacggctataagcagcaagtggttactgtcatggatgacctatgtcaaaaccctgacggtaaggacatgtcactattttgccaaatggtgtccaccgtcgacttcatcccaccaatggcttccctcgaggagaaaggggtctctttcacgtccaagtttgttattgcatccactaatgccagcaacatcatagtgccaacagtatccgattctgatgccatccgccgcagattttatatggattgtgacattgaagtgacagactcatataagacagacctgggtaggttggacgctggacgagcggccaaattgtgttctgagaacaacacagcaaatttcaagcgttgcagcccgctagtatgtggaaaggccattcagttgagagacaggaaatccaaggtcagatacagcgtggatacagtgatctctgaactcataagagagtacaataacagatccgccattggcaatacaattgaagctttgtttcagggcccacctaagtttagacccatcagaatc---agtcttgaggaaacaccagctcctgatgccattagtgatctccttgccagcgtggatagcgaagaggtacgtcagtactgt-agagatcaaggttggattatcccggaaactcctacaaatgttgaacgacacctcaacagagctgtgttagtcatgcaatccatcgccacggtagtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagcgctcaagaaacctgttcttcgcacagcaacagtgcagggtccaagccttgactttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctgggtgtcagagatcgcttggctgtccttccgcgacattcccaacctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttggagctgactttaattacccttgacactaacgagaaattcagggatatcaccaaatttattccggaaagcatcagtggtgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtaccagtaggtgacgttgtgcagtatggcttcttgaatctcagtggaaaaccgactcaccgtactatgatgtacaactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttatcggcattcacataggaggcaatggcagacaagggttctgtgcgggactcaagagaagctactttgctagtgaacagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatggaccaacacgcaccaagttcgaacctagtgtgtttcatgacgtctttgagggtaacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcactgttctctaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagccctccactacgcaaatcagttaaaacagttaagcataaacacctctcagatgagcatggatgaggcttgctatggcacagaaaatctcgaggctattgaccttcacaccagtgcgggatatccctacagtgcgttaggaataaagaagagggatatcttagaccccactaccagagatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactccacctatgttaaggatgagcttcgctcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttaccttagaatggcctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagtaaactgccaatcctacttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagtttggttcagagcgttggaaatggtccttagagagataggttatagtgaagaggcaatctcactcattgaaggaatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaggttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggacgcgcgtaatactcaagatcacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccagtagggaaagcattggcaattcccaattacgaaaatctgaggcgcaattggctcgaactatttt-----agaggttaaat-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-a-actg--------gtgggggtaaatttgt-ta-taaccaa-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ541162.1_Coxsackievirus_A6_isolate_PF3/SH/CHN/2013_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggggccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---t-cc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atccttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggattcgttccac-----tcaccaa--------------tcgtacagtccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctggatcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaagactcttatgcagcatcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggctatagtgatcgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagccgtggacaagcctactcgccctgacgtgtcggtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgccgcaagcagccctgctacgaagcctaatggacaaggattgtacccagattttgctcatactaacccaggtaaaaatggtcaagagttccgagatccatatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatttacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttgggttggttgtgattcctattagccctttaaaatattgcaatggagctaccacagaagtgccaatcacactaactattgccccacttagttcggagtttagcggcctccgacaggcaataaaacaagggtttcccacagagctcaagcctgggactaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgtcagatagaaaccatactagaagtcaataa----------t------accaccggcactaccggg------gtcagtaggttactaatccccgttcgagcgcagaaca------atgtggaccagttatgtgcatcgttccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcaaatctgtaggtattacactcaatggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgccacaagggaagcagcaatgctcgggacgcatatagtgtgggattttggtttgcagtcatcggtcaccctagttataccttggattagcaacactcattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtggtgccaccagacacccccactgaggctaacatcatagctcttggagcggcacagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaagtgctgttagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagttagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcggaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggagcacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcagcgatagcacaacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggctaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaactgtcagtgaatctaccaccgggaaaaacatccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggagctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcacaatgattgggcaaatttagtgtgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagccaagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaagaagccatggaacaaggtgtatcagattatatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggccgttgaaaaaatcttgaagaacttgattaaactgatctcggcactagtcatagtgatcagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacagcatctatcttaggtattcctattgctcaaaaacagagcgcctcttggcttaagaaattcaatgatatggccagtgctgctaagggattggaatggatttctaacaagattagtaaattcattgactggctcaaagagaagatcataccagcagccagggagaaggttgagttcttaaacaacttgaaacagctacct-ctactagagaaccagatctcaaacctagagcaatctgctgcctcacaagaagatcttgaagtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaattccagccactgtacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctcatcatcaggggctcaccgggcacagggaagtccctagcgactggcatcattgcccgcgcgatagctgataaatatcactctagtgtgtactcactcccaccagatcctgaccactttgacggctataagcagcaagtggttactgtcatggatgacctgtgtcaaaaccctgatggtaaggacatgtcactattttgccaaatggtgtccaccgtcgacttcatcccaccaatggcttccctcgaggagaaaggggtctctttcacatccaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtatccgattctgatgccatccgccgcagattttatatggattgtgacattgaagtgacagactcatataagacagacctgggtaggttggacgctggacgagcggccaaattgtgttctgagaacaacacagcaaatttcaagcgttgcagcccgctagtatgtggaaaggccattcagttgagagacaggaaatccaaggtcagatacagcgtggatacagtgatctctgaactcataagagagtacaataacagatccgccattggcaatacaattgaagctttgtttcagggcccacccaagtttagacccattagaatc---agtcttgaggaaacaccagctcctgatgccattagtgatctccttgtcagcgtggatagcgaagaggtacgtcagtactgt-agagatcaaggttggattatcccggaaactcctacaaatgttgaacgacacctcaacagagctgtgttagtcatgcaatccatcgccacggtagtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagcgctcaagaaacctgttcttcgcacagcaacagtgcagggtccaagccttgactttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctgggtgtcagagatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttggagctgactttaattacccttgacactaatgagaaattcagggatatcaccaaatttattccggaaagcatcagtggcgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtaccagtaggtgacgttgtgcagtatggcttcttgaatctcagtggaaaaccgactcaccgtactatgatgtataactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttattggcattcacataggaggcaatggcaggcaagggttttgtgcgggactcaagaggagctactttgctagtgaacagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatggaccaactcgcaccaagttcgaacctagtgtgtttcatgacgtcttcgagggtgacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctctaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagccctccactacgcaaatcagttaaaacagttaagcataaacacctctcagatgagcatggatgaggcttgctatggtacagaaaatcttgaggctattgaccttcacaccagtgcgggatatccctacagtgcgttaggaataaagaagagggatatcttagaccccactaccagagatgtgagtaagatgaagttctacatggataagtatggccttgacctcccttactccacctatgttaaggatgagcttcgctcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttaccttagaatggcctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagtaaactgccaatcctacttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagtttggtttagagcgttggaaatggtccttagagagataggttatagtgaagaggcaatctcactcattgaagggatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaggttaattgggaaaatgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgcaatactcaagatcacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccagtagggaaagcactggcaattcccaattacgaaaatctgaggcgcaattggctcgaattatttt-----agaggttaaac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgaacat-a-actg--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289386.1_Coxsackievirus_A6_isolate_CV-A6/P674/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctacggaacctttgtgcgcct-g-ttttaca-----acccc---t---c-cc-c---g-aactc-gcaacttagaaga------------atagcacgctatc-gatcaa-tagcaggcgtggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtacagtccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctggatcgcacgagacaaagaatgtggcgactg-aagggtctactatcaacttcaccaacatcaattattataaagactcttatgcagcatcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgtcctgtcttggatactatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggctatagtgatcgagtcgcacagttgactgtgggcaattcgaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcggtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaaggattatacccagattttgctcatactaacccaggtaaaagtggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatttacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttaaaatattgcaatggagctaccacagaagtgccaatcacactaactattgccccacttagttcggagtttagcggcctccgacaggcaataaaacaagggttccccacagagctcaagcctgggactaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgctagacttgtgtcagatagaaaccatactagaagtcaataa----------t------accaccggcactaccgga------gtcagtaggttactaatccccgttcgagcgcagaaca------atgtggaccagttatgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcaaatctgtaggtattacactcaatggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgccacaagggaagcagcaatgctcgggacgcatatagtgtgggattttggtttgcagtcatcggtcaccctagttataccttggattagcaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggattgtcaccatttggtaccaaaccaacttcgtggtgccaccagacacccccactgaggctaacatcatagctcttggagcggcgcagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaagtgctgttagcgcgcttgc--------------tgacaccacaatatctcgggtg--------------------------------accgcagccaacactgcagttagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcggaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggagcacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcagtgatagcacaacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagtaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggctaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaacaacatgatgggccattttgccatccgaactgtcagtgaatctaccaccgggaaaaacatccacgttcgggtgtatatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtctggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcacaatgattgggcaaatttagtgtgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaggaagccatggaacaaggtgtatcagattatatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggccgttgaaaagatcttgaagaacttgattaaactgatctcggcactagtcatagtgatcagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacagcatctatcttaggtattcccattgctcaaaaacagagtgcctcttggcttaagaaattcaatgatatggccagtgctgctaagggattggaatggatttctaacaagattagtaaattcattgactggctcaaagagaagatcgtaccagcagccagggagaaggttgagttcttaaacaacttgaaacagctacct-ctactagagaaccagatctcaaacctagagcaatctgctgcctcacaagaagatcttgaagtcatgtttgggaatgtgtcgtaccttgccca---------cttctgtcgcaaataccagccactgtacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggcacagggaagtctctagcgactggcatcattgcccgcgcaatagctgataaatatcactctagtgtgtactcactcccaccagatcctgaccactttgacggctataagcagcaagtggttactgtcatggatgacctatgtcaaaaccctgacggtaaggacatgtcactattttgccaaatggtgtccaccgtcgacttcatcccaccaatggcttccctcgaggagaaaggggtctctttcacgtccaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtatccgattctgatgccatccgccgcagattttatatggattgtgacattgaagtgacagactcatataagacagacctgggtaggttggatgctggacgagcggccaaattgtgttctgagaacaacacagcaaatttcaagcgttgcagcccgctagtatgtggaaaggccattcagttgagagacaggaaatccaaggtcagatacagcgtggatacagtgatctctgaactcataagagagtacaataacagatccgccattggcaatacaattgaagctttgtttcagggcccacccaagtttagacccattagaatc---agtcttgaggaaacaccagctcctgatgccattagtgatctccttgccagcgtggatagcgaagaggtacgtcagtactgt-agagatcaaggttggattatcccggaaactcctacaaatgttgaacgacacctcaacagagctgtgttagtcatgcaatccatcgccacggtggtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagcgctcaagaaacctgttcttcgcacagcaacagtgcagggtacaagccttgactttgccctatcactattgagaagaaacatcaggcaagtgcaaacagaccaagggcacttcactatgctgggtgtaagagatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttggagctgactttgattacccttgacactaacgagaaattcagggatatcaccaaatttattccagaaagcatcagtggtgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtaccagtaggtgatgttgtgcagtatggcttcttgaatctcagtggaaaaccgactcaccgtactatgatgtacaactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttattggcattcacataggaggcaatggcagacaagggttctgtgcgggactcaagagaagctactttgctagcgaacagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatgggccaactcgcaccaagttcgaacctagtgtgtttcatgacgtctttgagggtaacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctctaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagccctccactacgcaaatcagttaaaacagttaagcataaacacctctcagatgagcatggatgaggcttgctatggcacagaaaatcttgaggctattgaccttcacaccagtgcgggatatccctacagtgcgttaggaataaagaagagggatatcttagaccccactaccagagatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactccacctatgttaaggatgagcttcgctcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttaccttagaatggtttttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagtaaactgccaatcctacttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagtttggttcagagcgttggaaatggtccttagagagataggttatagtgaagaggcaatctcactcattgaagggatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtctaactatgactcctgcagataagtccccttgcttcaatgaggttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggacgcgcgtaatactcaagatcacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagattttgtccagtagggaaagcattggccattctcaataacgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064304.1_Coxsackievirus_A6_strain_SHAPHC5606/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---t-cc-c---a-aaatt-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttaata-----tacttg----tttgtg-ggtttcgttccat-----tcaccaa--------------tcgtacagtccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctggatcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaagactcttatgcagcatcagctagcaggcaggattttgcacaagatcctgcaaagtttacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggctatagtgatcgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcggtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtagctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaaggattgtacccagattttgctcatactaacccaggtaaaaatggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatttacgaactaataactgcgcaaccattattatgccgtatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcccattagccctttaaaatattgcaatggagccaccacagaagtgccaatcacactaactattgctccacttagttcggagtttagcggcctccgacaggcaataaaacaagggtttcccacagagctcaagcctgggactaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgtcagatagaaaccatactagaagtcaataa----------t------accaccggcactaccggg------gtcagtaggttactaatccctgttcgggcgcagaaca------atgtggaccagttatgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcaaatctgtaggtattacactcaatggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgccacaagggaagcagcaatgctcgggacgcatatagtgtgggattttggattacagtcatcggtcaccctagttataccttggattagcaatacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtggtgccaccagacacccccactgaggctaacatcatagctcttggagcggcacagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------gttgcaaatgcagtgg---agagtgctgttagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagttagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcggaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggagcacttttactctcgtgcagggctggtaggagttgtggaggtgaaggattcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcaacggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcagtgatagcacaacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccccaagccggatagcaggaaatcataccaatggcagaccgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgacggctaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaactgtcagtgaatctaccaccgggaaaaacatccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatagtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcacaatgattgggcaaatttagtgtgggagagtagctcacgagatctcctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtggtggactcgtcggttttgcagatgtcagagaccttttgtggttggatgaggaagccatggaacaaggtgtaacagattatatcaaa-gggctcggcgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggccgttgaaaagatcttgaagaacttgattaaactgatctcggcactagtcatagtgatcagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacagcatctatcttaggtattcccattgcccaaaaacagagcgcctcttggcttaagaaattcaatgatatggccagtgctgctaagggattggaatggatttctaacaagattagtaaattcattgactggctcaaagagaagatcataccagcggccagggagaaggttgagttcttaaacaacttgaaacagctacct-ctactagagaaccagatctcaaacctagagcaatctgctgcctcacaagaagatcttgaagtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaattccagccactgtacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggcacagggaagtctctagcgactggcatcattgcccgcgcgatagctgataaatatcactctagtgtgtactcactcccaccagatcctgaccactttgacggctataagcagcaagtggttactgtcatggatgacctatgtcaaaaccctgacggtaaggacatgtcgctattttgccaaatggtgtccaccgtcgactttatcccaccaatggcttccctcgaggagaaaggggtctcttttacgtccaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtatccgattctgatgccatccgccgcagattttatatggattgtgacattgaagtgacagactcatataagacagacctgggtaggttggacgctggacgagcggccaaattgtgttctgagaacaacacagcaaatttcaagcgttgcagcccgctagtatgtggaaaggccattcagttgagagacaggaaatccaaggtcagatacagcgtggatacagtgatctctgaactcataagagagtacaataacagatccgccattggcaatacaattgaagctttgtttcagggcccacccaagtttagacccattagaatt---agtcttgaggaaacaccagctcctgatgccattagtgatctccttgccagcgtggatagcgaagaggtacgtcagtactgt-agagatcaaggttggattatcccggaaactcctacaaatgttgaacgacacctcaacagagctgtattagtcatgcaatccatcgccacggtagtggcagtagtctcattagtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagcgctcaagaaacctgttcttcgcacagcaacagtgcagggtccaagccttgactttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctgggtgtcagagatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggagcataagcttgtgaatgttttagatgctgttgagctagtggacgaacaaggggttaacttggagctgactttaattacccttgacactaacgagaaatttagggatatcaccaaatttattccggaaagcattagtggtgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtaccagtaggtgacgttgtgcagtatggcttcttgaatctcagtggaaaaccgacccaccgtactatgatgtacaactttcctaccaaggcaggacaatgtgggggagtgatcacatcagttgggaaggttattggcattcacataggaggcaatggtagacaagggttctgtgcgggactcaagagaagctactttgctagtgaacagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatggaccaactcgcaccaagttcgaacccagtgtgtttcatgacgtttttgagggtaacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctctaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagctctccactacgcaaatcagttaaaacagttaaacataaacacctctcagatgagcatggatgaggcttgctatggcacagaaaatctcgaggctattgaccttcacaccagtgcgggatatccctacagtgcgttaggaataaagaagagggatatcttagaccccactaccagagatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactccacctatgttaaggatgagctccgctcggtagacaagattaagaaagggaagtcccgtctgattgaagccagcagtctgaatgactcggtttaccttagaatgacctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagtaaactgccaatcctacttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagtttggttcagagcgttggaaatggtccttagagagataggttatagtgaagaggcagtctcactcattgaagggatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaattcaatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaggttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggacgcgcgtaatactcaagatcacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccagtagggaaagcattggcaattcccaattacgaaaatctgaggcgcaattggctcgaattatttt-----agaggttaaac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064300.1_Coxsackievirus_A6_strain_SHAPHC5494/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---t-cc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----ttcgtg-ggcttcgttccac-----tcaccaa--------------tcgtacagtccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagagaaatctggatcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaagactcttatgcagcatcagctagtaggcaggattttgcacaagaccctgcaaagtttacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgatcgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcggtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtattaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaaggattgtacccagattttgctcatactaacccaggaaaaaatggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatttacgaactaataactgcgcaaccattattatgccgtatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttaaaatattgcaatggagctaccacagaagtgccaatcacactaactattgccccacttagttcggagtttagcggcctccgacaggcaataaaacaagggtttcccacagagctcaagcctgggactaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgtcagatagaaaccatactagaagtcaataa----------t------accaccggcactaccggg------gtcagtaggttactaatccccgttcgagcgcagaaca------atgtggaccagttatgtgcatcgttccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggccaaatctgtaggtattacactcaatggtctggttcccttaaggtgaccttcatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgccacaagggaagcagcaatgctcgggacgcatatagtgtgggattttggtttgcagtcatcggtcaccctagttataccttggattagcaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatctggtaccaaaccaacttcgtggtgccaccagacacccccactgaggctaacatcatagctcttggagcggcacagaggaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaagtgctgttagcgcacttgc--------------tgacaccacaatatcccgagtg--------------------------------accgcagccaacactgcagttagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcggaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaatggggttaatgaggcgagtgtggagcacttttactctcgtgcagggctggtaggagttgtggaggtaaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatatatgcgctttgatgccgagttcacttttgtgtccaacctcagtgatagcacaacgcccgggatgctgctgcagtatatgtacgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcaccagcaacagcttatcagtggttttatgatggctaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaaccgtcagtgaatctaccaccgggaaaaacatccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacgtacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccagcagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcacaatgattgggcaaatttagtgtgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaattctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagccagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaggaggccatggaacaaggtgtatcagattatatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggccgttgaaaagatcttgaagaacttgattaaactgatctcggcactagtcatagtgatcagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacagcatctatcttaagtattcccattgctcaaaaacagagcgcctcttggcttaagaaattcaatgatatggccagcgctgctaagggattggaatggatttctaacaagattagtaaattcattgactggcttaaggagaaaatcataccagcagctagggagaaggttgagttcttaaacaacttgaaacagctacct-ctactggagaaccagatctcaaacctagagcaatctgctgcctcacaagaagatcttgaagtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaattccagccactgtacgctacagaggctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcagaggctcaccgggcacagggaagtctctagcgactggcatcattgcccgcgcgatagctgataaatatcactctagtgtgtactcactcccaccagaccctgaccactttgacggctataagcagcaagtggttactgtcatggatgacctatgtcaaaaccctgacggtaaggacatgtcactattttgccaaatggtgtccaccgtcgacttcatcccaccaatggcttccctcgaggagaaaggggtctctttcacgtccaagtttgttatcgcatccactaatgccagcaacatcatagtgccaacagtatccgattctgatgccatccgccgcagattttatatggattgtgacattgaagtgacagactcatataagacagacctgggtaggttggacgctggacgagcggccaaattgtgttctgagaacaacacagcaaatttcaagcgctgcagcccgctagtatgtggaaaggccattcagttgagagacaggaaatccaaggtcagatacagcgtggatacagtgatctctgaactcataagagagtacaataacagatccgccattggcaatacaattgaagctttgtttcagggcccacctaagtttagacccattagaatc---agtcttgaggaaacaccagctcctgatgccattagtgatctccttgccagcgtggatagcgaagaggtacgtcagtactgt-agagatcaaggttggattatcccggaaactcctacaaatgttgaacgacacctcaacagagctgtgttagttatgcaatccatcgccacggtagtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagcgctcaagaaacctgttcttcgcacagcaacagtgcagggtccaagccttgactttgccctatcactattgagaagaaacatcaggcaagtgcagacagaccaagggcacttcactatgctgggtgtcagagatcgcttggctgtcctcccgcgacattctcaacctggaaaaactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttggagctgactttagttacccttgacaccaacgagaaattcagggatatcaccaaatttattccggaaagcatcagtggtgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtaccagtaggtgacgttgtacagtatggcttcttgaatctcagtggaaaaccgactcaccgtactatgatgtacaactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttattggcattcacataggaggcaatggcagacaagggttctgtgcgggactcaagagaagctactttgctagtgaacagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatggaccaactcgcaccaagttcgaacctagtgtgtttcatgacgtctttgagggtaacaaggaaccagcagttttgcatagtaaagaccctcgccttgaggtggatttcgagcaagcactgttctctaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagccctccactacgcaaatcagctaaaacagttaagcataaacacctctcagatgagcatggatgaggcttgctatggcacagaaaatcttgaggctattgaccttcacaccagtgcgggatacccctacagtgcgttaggaataaagaagagggatatcttagaccccactaccagagatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactccacctatgttaaggacgagcttcgctcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttaccttagaatggcctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagtaaactgccaatcctacttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagtttggttcagagcgttggaaatggtccttagagagataggttatagtgaagaggcaatctcactcattgaagggatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgttcaggaacatccatcttcaattcgatgataaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgtttcaatgaggttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggacgcgcgtaatactcaagatcacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccagtagggaaagcattggcaattcccaattacgaaaatttgaggcgcaattggctcgaattatttt-----agaggttaaac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289368.1_Coxsackievirus_A6_isolate_CV-A6/P143/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctacggaacctttgtgcgcct-g-ttttaca-----acccc---t---c-cc-c---g-aactc-gcaacttagaaga------------atagcacgctatc-gatcaa-taacaggcatggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggccgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtacagtccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaggactcttatgcagcatcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcggccccgttgcaatccccttctgttgaggcgtgcggctatagtgatcgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcggtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgttcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggctctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaaggattgtacccagattttgctcatactaatccaggtaaaaatggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatttacgaactaataactgcgcaaccattattatgccatatgttaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttaaaatattgcaatggagctaccacagaagtgccaatcacactaactattgccccacttaattcggagtttagcggcctccgacaagcaataaaacaagggtttcctacagagctcaagcctgggactaaccaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgtcagatagaaaccatactagaagtcaataa----------t------accaccggcactaccggg------gtcagtaggttactaatccccgttcgagcgcagaaca------atgtggaccagttatgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggtcggtcagatctgtaggtattacactcaatggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacctggtagtgcccagcccgccacaagggaagcagcaatgctcgggacgcatatagtgtgggatttcggtttgcagtcatcggtcaccttagttataccttggattagcaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagacacccccactgaggctaacatcatagctcttggagcggcacagaagaacttcaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaagtgctgttagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagttagtacccactccctgggcacagggcgtgtaccatcattgcaagctgcggaaacgggagccaattctaatgctagtgatgataaccatattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaaccttaatgacagcacgacgcccgggatgctgctacagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcataaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattgggccatccgaactgtcagtgaatctaccgccgggaaaaacatccacgctcgggggtacatgagacttaagcacgtgagagcttgggtacctagaccacttagatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggactatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcaaaatgattgggcaaatttagtatgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccagatatcagtcgcacctcatgcttgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaagaagccatggaacaaggtgtatcagattatatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagttcttaagaactaccttataggatctgaaggggccgttgaaaagatcttgaagaatttgattaaactgatctcggcactagtcatagtgatcagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggattaaagctaaaacggcatctatcttaggtattcctattgttcaaaaacagagcgcctcttggcttaagaaattcaatgatatggccagtgctgctaagggattggaatggatttctaacaagattagtaaattcattgactggctcaaagagaagatcataccagcagccagagagaaggttgagttcttaaacaacttgaaacagctacct-ctactagagaaccagatctcaaacctagagcaatctgctgcctcacaagaagatcttgaagtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgtaaattccagccactgtacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggcacagggaagtctctagcgactggcatcattgcccgcgcgatagctgataaatatcactctagtgtgtactcactcccgccagatcctgaccactttgacggctataagcagcaagtggttactgtcatggatgacctatgtcaaaaccctgacggtaaggacatgtcactattttgccaaatggtgtccaccgtcgacttcatcccaccaatggcttccctcgaggagaaaggggtctctttcacatccaagtttgttatcgcatccaccaatgccagcaatatcatagtgccaacagtatccgattctgatgccatccgccgcagattttatatggattgtgacattgaagtgacagactcatataagacagacctgggtaggttggacgctggacgagcggccaaattgtgttctgagaacaacacagcaaatttcaagcgttgcagcccgctagtatgtggaaaggccattcagttgagagacaggaaatccaaggtcagatacagcgtggacacagtgatctctgaactcataagagagtacaataacagatccgccattggcaatacaattgaagctttgtttcagggcccacccaagtttagacccattagaatc---agtcttgaggaaacaccagctcctgatgccattagtgatctccttgccagcgtggatagcgaagaggtgcgtcagtactgt-agagatcaaggttggattatcccggaaactcctacaaatgttgaacgacacctcaacagagctgtgttagtcatgcaatccatcgccacggtagtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagcgctcaagaaacctgtttttggtacagcaacagtgcagggtccaagcattgactttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctgggtgtcagagatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttaaagctgactttaattactcttgacactaatgagaaattcagggatatcaccaaatttattccggaaagcatcagtggtgctagtgatgccaccctagtgatcaatacagagcacatgccctcaatgtttgtaccagtaggtgacgttgtgcagtatggcttcttgaatctcagtggaaagccgactcaccgtactatgatgtataactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttattggcattcacataggaggcaatggtaggcaggggttctgtgcgggactcaagagaagctactttgctagtgaacagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatggaccaactcgcaccaagttcgaacctagtgtgtttcatgacgtctttgagggtaacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctttaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagccctccactacgcaaatcagttaaaacagttaagcataaacacctctcagatgagcatggaggaggcttgctacggcacagaaaatcttgaggctattgaccttcacaccagtgcgggatatccctacagtgcgttaggaataaagaagagggatatcttagaccccactaccagagatgtgagtaaaatgaagttctacatggataagtatggtcttgacctcccttactccacctatgttaaggatgagcttcgctcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttaccttagaatggcctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagtaaactgccaatcctgcttcctggttccctctttgctttcgattactcaggttatgatgctagcctcagcccggtttggttcagagcattggaaatggtccttaaagagataggttatagtgaagaggcaatctcactcattgaagggatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaggttaattgggaaaacgcaaccttccttaagagaggttttttgcctgatgaacaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgtaatactcaagatcacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccagtagggaaagcattggcaattcccaattacgaaaatctgaggcgcaattggctcgaattatttt-----agaggttaaac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgaacat-a-actg--------gtgggggtaaatttgt-ta-taatc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289389.1_Coxsackievirus_A6_isolate_CV-A6/P728/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctacggaacctttgtgcgcct-g-ttttaca-----acccc---t---c-cc-c---g-aactc-gcaacttagaaga------------atagcacgctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtacagtccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaatttcaccaacatcaattactataaggactcttatgcagcatcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgatcgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcggtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcatggggccctcttagtggctgcaatccccgagtttgtggttgctgcaagcagccctgctacgaagcctaatggacaaggattgtacccagattttgctcatactaacccaggtaaaaatggtcaagagttccgagacccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatttgcgaactaataactgcgcaactattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttaaaatattgcaatggagctaccacagaagtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaaccaatttcttacaactgatgacgggacatctccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgtcagatagaaaccatactagaagtcaataa----------t------accaccggcactcccggg------gtcagtaggttactaatccccgttcgagcgcagaaca------atgtggaccagttatgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacccggtagtgcccagcccgccacaagggaagcagcaatgctcgggacgcatatagtgtgggattttggtttgcagtcatcggtcaccttagttataccttggattagcaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagacacccccactgaggctaacatcatagctcttggagcggcacagaagaattttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaagtgctgttagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaatactgcagttagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcggaaacgggagcaagttctaatgcaagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaagactcgggcaccag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagtttacttttgtgtccaacctcagtgatagcacaacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgttccattcatgtcgccagcaacagcttatcagtggttttatgatggttaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaactgtcagtgaatctaccaccgggaaaaacatccacgttcgggtgtacatgagaatcaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggactatgatggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcataatgattgggcaaatttagtgtgggaaagtagctcacgagaccttctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagcgagtattaccctgccagatatcagtcgcacctcatgcttgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaagaagccatggaacaaggtgtatcagattatatcaaa-gggctcggtgatgcattcggaactggtttcactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggccgttgaaaagatcttgaagaatttgattaaactgatctcggcactagtcatagtgatcagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacggcatctatcttaggtattcctattgctcaaaaacagagcgcctcttggcttaagaaattcaatgatatggccagtgctgctaagggattggaatggatttctaacaagattagtaaattcattgactggctcaaagagaagatcataccagcagccagggagaaggttgagttcttaaacaacttgaaacagctacct-ttactagagaaccagatctcaaacctagagcaatctgctgcctcacaagaagatcttgaagtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaattccagccactgtacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggcacagggaagtctctagcgactggcatcattgcccgcgcgatagctgataaatatcactctagtgtgtactcactcccaccagatcctgaccactttgacggttataagcagcaagtggttactgtcatggatgacctatgtcaaaaccctgacggtaaggacatgtcactattttgccaaatggtgtccaccgtcgacttcatcccaccaatggcttccctcgaggagaaaggggtctctttcacatccaagtttgttattgcatccaccaatgccagcaacatcgtagtgccaacagtatccgattctgatgccatccgccgcaggttttatatggattgtgacattgaagtgacagactcatataagacagacctgagtaggttggacgctggacgagcggccaaattgtgttctgagaacaacacagcaaatttcaagcgttgcagcccgctagtatgtggaaaggccattcagttgagagacaggaaatccaaggtcagatacagcgtggatacagtgatctctgaactcataagagagtacaataacagatccgccattggcaatacaattgaagctttgtttcagggcccacccaagtttagacccattagaatc---agtcttgaggaaacaccagctcctgatgccattagtgatctccttgccagcgtggatagcgaagaggtacgtcagtactgt-agagatcaaggttggattatcccggaaactcctacaaatgttgaacgacacctcaacagagctgtgttagtcatgcaatccatcgccacggtagtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagtgctcaagaaacctgttcttcgcacagcaacagtgcagggtccaagccttgactttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctaggtgtcagagatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagttagtggacgaacaaggggttaacttagagctgactttaattacccttgacactaatgagaaattcagggatatcaccaaatttattccggaaagcatcagtggtgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtaccagtaggtgacgttgtgcagtatggcttcttgaatctcagtggaaaaccgactcaccgtactatgatgtataactttcctaccaaggcaggacaatgtgggggagtggtcacgtcagttgggaaggttattggcattcacataggaggcaatggcaggcaggggttctgtgcgggactcaagaggagctactttgctagtgaacagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatggaccaactcgcaccaagttcgaacccagtgtgtttcatgacgtctttgagggtaacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctctaagtacgtggggaacacactacacgaggtttatgagtacatcaaagaggcagccctccactacgcaaatcagttaaaacagttaagcataaacacctctcagatgagtatggaggaggcttgctatggcacagaaaatcttgaggctattgaccttcacaccagtgcgggatatccctacagtgcgttaggaataaagaagagggatatcttagaccccactaccagagatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactccacctatgttaaggatgagcttcgctcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttaccttagaatggtctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagtaaactgccaatcctacttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagtttggttcagagcgttggaaatggtccttagagagataggttatagtgaagaggcaatctcactcattgaagggatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtctaactatgactcctgcagataagtccccttgcttcaatgaggttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggacgcgcgtaatactcaagatcacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccagtagggaaagcattggcaattcccaattacgaaaatctgaggcgcaattggctcgaattatttt-----agaggttaaac-------------------------gtac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064302.1_Coxsackievirus_A6_strain_SHAPHC5524/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatttttgtgcgcct-g-ttttata-----acccc---t---t-cc-c---g-gaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgaa-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtacattccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctggatcgcacgagacaaggaatgtagcgactg-aagggtctactatcaacttcactaacatcaattactataaagactcttatgcagcatcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgtcctgttctggataccatcagggaggttgcagccccattgcaatccccttctgttgaggcgtgcggttatagtgatcgagtcgcacagttaactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcggtgaatagattttatacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaaggattgtacccagactttgctcatactaacccaggaaaaaatggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaacttacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgctcaaccattcaaattttggattggttgtgattcctattagccctttgaagtattgcaatggagctactacagaagtgccaatcacactaactattgccccacttagttcggagtttagcggcctccgacaggcaataaaacaagggtttcccacagagctcaagcctgggactaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctctgttagatttgtgtcagatagaaaccatactagaagtcaacaa----------t------accaccggcactaccggg------gttagtaggctgctaatccctgttcgagcgcagaaca------atgtggaccagttatgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcaaatctgtaggtattacactcaatggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgccacaagggaagcagcaatgctcgggacgcatatagtgtgggattttggtttgcagtcatcggtcaccctagttataccttggattagcaacactcatttcagagcagttaagactggaggggtgtacgactactacgcaaccgggatcgtcaccatttggtatcaaaccaacttcgtggtaccaccagacacccccactgaggctaacatcatagctcttggagcggcacagaagaactttaccctaaaattgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgaccct--------attgcaaatgcagtag---aaagtgctgttagcgcgcttgc--------------tgacactacaatatcccgggtg--------------------------------accgcagccaacactgcagttagtacccactccctgggcacagggcgtgtgccagcattgcaagctgcggaaacgggagcaagttccaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggagcacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcagtgatagcacaacacccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggctaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaataacatgatgggccattttgccatccgaactgtcagtgaatctaccaccgggaaaaacatccacgttcgggtgtacatgagaatcaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagtcaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcacaatgactgggcaaatttagtgtgggaaagtagttcacgagatcttctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctggcctcgtcttcgtggaagccagtgagtattaccctgctaggtatcagtcgcacctcatgcttgctaagggacattctgaacccggtgattgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtctactggtggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaagaagccatggaacaaggtgtatcagattatatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggccgttgaaaagatcttgaagaacttgattaaactgatctcggcactagtcatagtgatcagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacagcatctatcttaggtattcctattgctcaaaaacagagcgcttcttggcttaagaaattcaatgatatggccagtgctgctaaggggttggaatggatttctaacaagattagtaaattcattgactggctcaaagagaagatcataccagcagccagggagaaggttgagttcttaaacaacttgaaacagctacct-ctactagagaaccagatctcaaacctagagcaatctgctgcctcacaagaagatcttgaagtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaattccagccattgtacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggcacagggaagtctctagcgactggcatcattgcccgcgcgatagctgataaatatcactctagtgtgtactcactcccaccagatcctgatcactttgacggctataagcagcaagtggttactgtcatggatgacctatgtcaaaaccctgacggtaaggacatgtcactattttgccaaatggtgtccaccgtcgacttcatcccaccaatggcttccctcgaggagaaaggggtctctttcacatccaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtgtccgattctgatgccatccgccgcagattttatatggattgtgacattgaagtgacagactcatataagacagacctgggtaggttggacgctggacgagcggccaaattgtgctctgagaacaacacagcaaatttcaagcgttgcagcccgctagtatgtggaaaggccattcagttgagagacaggaaatccaaggtcagatacagcgtggatacagtgatctctgaactcataagagagtacaataacagatccgccattggcaatacaattgaagctttgtttcagggcccacccaagtttaaacccattagaatc---agtcttgaggaaacaccagctcctgatgccattagtgatctccttgccagcgtggatagcgaagaggtacgtcagtactgt-agagatcaaggttggattatcccggaaactcctacaaatgttgaacgacacctcaacagagctgtgttagttatgcaatccatcgccacggtagtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagcgctcaagaaacctgttcttcgcacagcaacagtgcagggtccaagccttgactttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcaccatgctgggcgtcagagatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttagagctgactttaattacccttgacactaatgagaaattcagggatatcaccaaatttattccggaaaacatcagtggtgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtgccagtaggtgacgttgtgcagtatggcttcttgaatctcagtggaaaaccgactcaccgcactatgatgtataactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttattggcattcacataggaggcaatggcaggcaagggttttgtgcgggactcaagagaagctactttgccagtgaacagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatggaccaactcgcaccaagttcgaacctagtgtgtttcatgacgtcttcgagggtaacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctctaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagccctccactacgcaaatcagttaaaacagttaagcataaacacctctcagatgagcatggatgaggcttgctatggcacagaaaatcttgaggctattgaccttcacaccagtgcgggatatccctacagtgcgttaggaataaagaagagggatatcttagaccccactactagagatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactccacctatgttaaggatgagcttcgttcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttaccttagaatggcctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagccgtggggtgcaacccagatgtgttttggagtaaactaccaatcctacttcctggttccctcttcgcttttgattactcaggttatgatgctagccttagcccagtttggttcagagcgttggaaatggtccttagagagataggttatagtgaagaggcaatctcactcattgaagggatcaatcacacacatcatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaattcgatgattaacaacatcatcattagagcgttgcttattagaacattcaagggtattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaggttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttttgattcatcccaccatgccaatgaaagagattcatgagtccattcgatggaccaaggatgcgcgcaatactcaagatcacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccagtggggaaagcattggcaattcccaattacgaaaatctgaggcgcaattggcttgaattatttt-----agaggttaaac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064303.1_Coxsackievirus_A6_strain_SHAPHC5644/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcacactgattctacggaatctttgtgcgcct-g-ttttaca-----acccc---t---t-cc-c---a-agact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtacagtccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctggatcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaagactcttatgcagcatcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgtcctgttttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggctatagtgatcgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgatgtgtcggtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccaccagggggctctcttagtggctgcaatccccgaatttgtggttgctgcgagcagccctgctacgaagcccaatggacaaggattgtacccagattttgctcatactaacccaggtaaaaatggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatttacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttaaagtattgcaatggggctaccacagaagtgccaatcacactaactattgccccacttagttcggagtttagcggcctccgacaggcaataaaacaagggttccccacagagctcaagcctgggactaatcaatttcttacgactgatgacgggacatccccaccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgtcagatagaaaccatactagaagtcaataa----------t------accaccggcactactggg------gtcaataggttactaatccccgttcgggcgcagaaca------atgtggaccagttatgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcaaatctgtaggtattacactcagtggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgccacaagggaagcagcaatgctcgggacgcacatagtgtgggattttggtttgcagtcatcggtcaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtgtacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaatttcgtggtgccaccagacacccccactgaggctaacatcatagctcttggagcggcacagaagaactttaccctaaagttgtgcaaggatactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaagtgctgttagcgcacttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagttagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcggaaacgggagcaagttctaatgctagtgatgagaaccttattgaaactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggagcacttttactctcgtgcagggctggtaggagttgtggaggtaaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcagtgatagcacaacgcccgggatgctgttgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcgtaccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgttccattcatgtcgccagcaacagcttatcagtggttttatgatggctaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccattcgaactgtcagtgaatctaccaccgggaaaaacatccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagtcaaac----aataactaacactgcgaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgctactcacaatgattgggcaaatttagtgtgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcaatcgcacctcatgcttgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccagcatggcgtgattggtatcgtgtccactggtggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaagaagccatggaacaaggtgtatcagattatattaaa-gggctcggtgatgcatttggaactggttttactgatgcagtgtcaagggaagtggaagctcttaagagctaccttataggatctgaaggggccgttgaaaagattttgaagaacttgattaaactgatctcggcactagtcatagtgatcagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacagcatctatcttaggtattcctattgctcaaaaacagagcgcctcttggcttaagaaattcaatgatatggccagtgctgctaagggactggaatggatttctaacaagattagtaaattcattgactggctcaaagagaagatcataccagcagccagggagaaggttgagttcttaaacaacttgaaacagctgcct-ctactagagaaccagatctcaaacctagagcaatctgctgcctcacaagaggatcttgaagccatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaattccagccactgtacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggcacagggaagtctctagcgactggcatcattgcccgcgcgatagctgataaatatcactctagtgtgtactcactcccaccagatcctgaccactttgacggctataagcagcaagtggttactgtcatggatgacctatgtcaaaaccctgacggtaaggacatgtcactattttgccaaatggtgtccaccgtcgacttcatcccaccaatggcttccctcgaggagaaaggggtctctttcacatccaagtttgttatcgcatccaccaacgccagcaacatcatagtgccaacagtatccgattctgatgccatccgccgcagattttatatggattgtgatattgaagtgacagactcatataagacagacctgggtaggttggacgctggacgagcggccaaattgtgctctgagaacaacacagcaaatttcaagcgttgcagcccgctagtatgtggaaaggccattcagttgagagacaggaaatccaaggtcagatacagcgtagatacagtgatctctgaactcataagagagtacaataacagatccgccattggcaatacaattgaagctttgtttcagggcccacccaagtttagacccattagaatc---agtcttgaggaaacaccagctcctgacgccattagtgatctccttgccagcgtggatagcgaagaggtacgtcagtactgt-agagatcaaggttggattatcccggaaactcctacaaatgttgaacgacacctcaacagagctgtattagtcatgcaatccatcgccacggtagtggcggtagtttcattggtgtatgtcatctataagctctttgctggattccagggcgcttactccggcgcccccaagcaagcgctcaagaaacctgttcttcgcacagcaacagtgcagggtccaagccttgactttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcaccatgctgggtgttagagatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctggtggacgaacaaggggttaacttagagctgactttaattactcttgacactaatgagaaattcagggatatcaccaaatttattccggaaagcatcagtggtgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtaccagtaggtgacgttgtacagtatggcttcttgaacctcagtggaaaaccgactcaccgtactatgatgtataactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttattggtattcacataggaggcaatggcaggcaagggttttgtgcgggacttaagaggagctactttgccagtgaacagggagagatccaatgggttagacccaacaaagaaacaggaagacttaacatcaatggaccaactcgcaccaagttcgaacctagtgtgtttcatgacgtctttgagggcaacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctctaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagccctccactacgcaaatcagttgaaacagttaaacataaacacctctcagatgagcatggatgaagcttgctacggtacagaaaatcttgaggctattgatcttcacaccagtgcgggatatccctacagtgcgttaggaataaagaagagggatatcttagaccctactaccagagatgtgagtaagatgaagttctacatggataagtatggccttgacctcccttactccacctatgttaaggatgagcttcgctcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttaccttagaatggcctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagtaaactgccaatcctacttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagtttggttcagagcgttggaaatggtcctcagagagataggttatagtgaagaggcaatctcactcattgaagggatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtgttgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaggttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgcaatactcaagatcacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccggtagggaaagcattggcaattcccaattacgaaaatctgaggcgcaattggctcgaattatttt-----agaggtcaaat-------------------------atac---------------ctcaaccc-caccagca----atctggt------c-g-----cgaacac-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT779412.1_Coxsackievirus_A6_isolate_Changchun098/CHN/2013_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccactcaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---t-cc-c---a-aaactcgtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtacagtccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaggactcttatgcagcatcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggctatagtgatcgagtcgcacagttgactgtgggtaattcaaccattaccacccaagaggcagctaacattatattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcggtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggaccaggattgtacccagactttgctcatactaacccaggaaaaaatggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatttacgaaccaataactgcgcaaccattattatgccatatgttaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttgaaatattgcaatggagctaccacagaagtgccaatcacactaactattgccccacttaattcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggactaaccaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgaattcacctctttgttagacttgtgtcagatagaaaccatactagaagtcaataa----------t------accaccggcactaccggg------gtcagtaggttactaatccccgttcgagcgcagaaca------atgtggaccagttatgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcagatctgcaggtattacactcaatggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacctggtagtgcccagcccgccacaagggaagcagcaatgctcgggacgcatatagtgtgggattttggtttgcagtcatcggtcaccttagttataccttggattagcaacacccattttagagcagttaagattggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagacacccccactgaggctaacatcatagctcttggagcggcacagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgaccct--------attgcaaatgcagtgg---aaagtgctgttagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagttagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcggaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactcg----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaaccttagtaatagcacaacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaactgtcagtgaatctaccaccgggaaaaacatccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggactatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcacaatgattgggcaaatttagtgtgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgcaactgtcaaacaggagtgtattactgcagctctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccagatatcagtcgcacctcatgcttgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaagaagccatggaacaaggtgtatcagattatatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagttcttaggaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttgattaaactgatctcggcactagtcatagtgatcagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacggcatctatcttaggtattcctattgttcaaaaacagagcgcctcttggcttaagaaattcaatgatatggccagtgctgccaagggattggaatggatttctaacaagattagtaaattcattgactggctcaaagagaagatcataccagcagccagggagaaggtcgagttcttaaacaacttgaaacagctacct-ctactagagaaccagatctcaaacctagagcaatctgctgcctcacaagaagatcttgaagtcatgtttgggaatgtgtcataccttgccca---------tttctgtcgcaaattccagccactgtacgctatagaagctaaaagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggcacagggaagtctctagcgactggcatcattgcccgcgcgatagctgataaataccactctagtgtgtactcactcccaccagatcctgaccactttgacggctataagcagcaagtggttactgtcatggatgacctatgtcaaaaccctgacggtaaggacatgtcattattttgccaaatggtgtccaccgtcgacttcatcccaccaatggcttccctcgaggagaaaggggtctctttcacatccaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtatccgattctgatgccatccgccgcagattttatatggattgtgacattgaagtgacagactcatataagacagacctgggtaggttggacgctggacgagcggctaaattgtgttctgagaacaacacagcaaatttcaagcgttgcagcccgctagtgtgtggaaaggccattcagttgagagacaggaaatccaaggtcagatacagcgtggatacagtgatctctgaactcataagagagtacaataacagatccgccattggcaatacaattgaagctttgtttcagggcccacccaagtttagacccattagaatc---agtcttgaggaaacaccagctcctgatgccattagtgatctccttgccagcgtggatagcgaagaggtgcgtcagtactgt-agagaccaaggttggattatcccggaaactcctacaaatgtagaacgacacctcaacagagctgtgttagtcatgcaatccatcgccacggtagtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagcgctcaagaaacctgttcttcgcacagcaacagtgcagggtccaagccttgactttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctgggtgtcagagatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttagagctgactttaattacccttgacactaatgagaaattcagggatatcaccaaatttattccggaaagcatcagtggtgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtaccagtgggtgacgttgtgcagtatggcttcttgaatctcagtgggaaaccgactcaccgtactatgatgtataactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttattggcattcacataggaggcaatggtaggcaggggttctgtgcggggctcaagagaagctactttgctagtgaacagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatggaccaactcgcaccaagttcgaacctagtgtgtttcatgacgtctttgagggtaacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctctaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagccctccactacgcaaatcaattaaaacagttaagcataaacacctctcagatgagcatggaggaggcttgctatggcacagaaaatcttgaggctattgaccttcacaccagtgcgggatacccctacagtgcgttaggaataaagaagagggatatcttagaccccactaccagagatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactccacctatgttaaggatgagcttcgctcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttaccttagaatggcctttgaacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagccgtggggtgcaacccagatgtgttttggagcaaactgccaatcctgcttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagcttggttcagagcattggaaatggtccttaaagagataggttatagtgaagaggcaatctcactcattgaagggatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatctttaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaagttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgagcaatccccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgtaatactcaagaacacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccagtagggaaagcattggcaattcccaattacgaaaatctgaggcgcaattggctcgaattatttt-----agaggttaaac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064299.1_Coxsackievirus_A6_strain_SHAPHC5444/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---t-cc-c---a-aagct-gcaacttagaaga------------atagcactctacc-gatcaa-tagcaggcatggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacaatggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgta-ggtttcgttccac-----tcaccaa--------------tcgtacagtccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctgggtcgcacgagacaaagaatgtagcaactg-gagggtctactatcaacttcaccaacatcaattactataaggactcttatgcagcatcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggctatagtgatcgagtcgcacagttgactgtgggtaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtaaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgtatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaaggattgtacccagattttgctcatactaacccaggtaaaaatggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatttacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccccctaaaatattgtaatggagctaccacagaagtgccaatcacactaactattgccccacttaattcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggactaaccaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgtcagatagaaaccatactagaagtcaataa----------t------accaccggcactaccggg------gtcaataggttactaatccccgttcgagcgcagaaca------atgtggaccagttatgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcagatctgtaggtattacacccaatggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacctggtagtgcccagcccgccacaagggaagcagcaatgctcgggacgcatatagtatgggattttggtttgcagtcatcggtcaccttagttataccttggattagcaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagacacccccactgaggctaacatcatagctcttggagcggcacagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaggtgctgttagcgcacttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagctaacactgcagctagcacccactccctgggcacagggcgtgtaccagcattgcaagctgcggaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctagtaggagttgtggaggtgaaggactcaggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagttgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcagtgatagcacaacgcccgggatgttgctgcagtatatgtatgtaccaccaggagcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcagtattcgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggctaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaacaacatgatgggccattttgccgtccgaactgtcagtgaatctaccaccggaaaaaacatccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaatcacccgacatacagccaaac----gataactaacactgcaaccgaccgtgcaagcataac---caccacggactatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcataatgattgggcaaatttagtgtgggaaagtagctcacgagatctcctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccagatatcagtcgcacctcatgcttgcgaaggggcattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggcatcgtgtctactggtggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaagaagccatggaacaaggtgtatcagattatatcaaa-gggctcggtgatgcattcggtactggttttactgacgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggccgttgaaaagatcttgaagaatttgattaaactaatctcggcactagtcatagtgatcagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacggcatctatcttaggtattcctattgctcaaaaacagagcgcctcttggctcaagaaattcaatgatatggccagtgctgctaagggattggaatggatttctaacaagattagtaaattcattgactggctcaaagagaagatcataccagcagccagggagaaggttgagttcttaaacaacttgaaacagctacct-ctactagagaaccagatctcaaacttagagcaatctgctgcctcacaagaagatcttgaagtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaattccaaccactgtacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggcacagggaagtctctagcgactggcatcattgcccgcgcgatagctgataaatatcactctagtgtgtactcactcccaccagatcctgaccactttgacggttataagcagcaagtggttactgtcatggatgacctatgtcaaaaccctgacggtaaggacatgtcactattttgccaaatggtgtccaccgtcgacttcatcccaccaatggcttccctcgaggagaaaggagtctctttcacatccaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtatccgattctgatgccatccgccgcagattttatatggattgtgacattgaagtgacagactcatataagacagacctgggtaggttggacgctggacgagcggccaaattgtgttctgagaacaacacagcaaatttcaagcgttgcagcccgctagtatgtggaaaggccattcagttgagagacaggaaatccaaagtcagatacagcgtggatacagtgatctctgaactcataagagagtacaataacagatccgccattggcaatacaattgaagctttgtttcagggcccacccaaatttagacccattagaatc---agtcttgaggaaacaccagctcctgatgccattagtgatcttcttgccagcgtggatagcgaagaggtacgtcagtactgt-agagatcaaggttggattatcccggaaactcctacaaatgttgaacgacacctcaacagagctgtgttagtcatgcaatccatcgccacggtagtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagcgctcaagaaacctgtccttcgcacagcaacagtacagggtccaagccttgactttgccctgtcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctgggtgtcagagatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttggagctgactttaattacccttgacactaatgagaaattcagggatatcaccaaatttattccggaaagcatcagcggtgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtaccagtaggtgacgttgtgcagtatggcttcttgaatctcagtggaaaaccgactcaccgtactatgatgtataactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttattggcattcacataggaggcaatggcagacaggggttctgtgcgggactcaagagaagctactttgttagtgagcagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatggaccaactcgcaccaagctcgaacctagtgtgtttcatgacgtctttgagggtaacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctctaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagccctccactacgcaaatcagttaaaacagttaaacataaacacctctcagatgagcatggaggaggcttgctatggcacagaaaatcttgaggctattgaccttcacaccagtgcgggatatccctacagtgcgttaggaataaagaagagggatatcttagaccccactaccagagatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactccacctatgttaaggatgagcttcgctcgatagataagattaagaaagggaagtctcgtttgattgaagccagcagtttgaatgactcggtttaccttagaatggcctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagtaaactgccaatcctgcttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagtttggttcagagcgttggaaatggtccttaaagagataggttatagtgaagaggcaatctcactcattgaagggattaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcagggtgctcaggaacatccatcttcaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaatatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtaaggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaggttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttctgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgtaatactcaagaccacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacgattagatctgtcccagtggggaaagcattggcaattcccaattacgaaaatctgaggcgcaattggctcgaattatttt-----agaggttagac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgaacac-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064283.1_Coxsackievirus_A6_strain_SHAPHC6073/SH/CHN/15_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---t--c-c---c-aaact-gtaacttagaaga------------atagcactctgtc-gatcaa-tagcaggcatggtgcaccaatcatgcctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaactgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtacagtccaa-actctaaaatatattttgattctgaacaatagaaa-------atgggcgctcaaatctcaacagaaaaatctggatcacacgagacaaagaatgtagcgactg-aagggtctactattaacttcaccaacatcaattactataaagactcttatgcagcatcggctagtaggcaggactttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcagccccattgcaatccccttctgttgaggcgtgcggctatagtgatcgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagagtactgtccttctacggacgctacagctgtggacaaacctactcgccctgacgtgtcggtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcccaatggacaaggattgtacccagattttgctcatactaacccaggtaaaagtggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccaccaatggatcaatttacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggtttggttgtgattcctattagccctttaaaatattgcaatggagctaccacagaagtgccaatcacactaactattgccccacttagttcggagtttagcggcctccgacaggcaataaaacaagggtttcccacagagctcaagcctgggactaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgatccacattcctggtgagttcacctctttgttagacttgtgccagatagaaaccatactagaagtcaataa----------t------accaccggcactaccggg------gtcagtaggttactaatccccgttcgagcgcagaaca------atgtggaccagttatgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcaaatctgtaggtattacactcaatggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgccacaagggaagcagcaatgctcgggacgcatatagtgtgggattttggtttgcagtcatcggtcaccctagttataccttggattagcaatacccattttagagcagttaagactggaggggtgtacgactactacgcaaccgggatcgtcactatttggtaccaaaccaacttcgtggtaccaccagacacccccactgaggccaacatcatagctcttggagcggcacagaagaactttaccctaaagttgtgcaaggacactgatgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaagtgctgttagcgcacttgc--------------tgacactacaatatcccgggtg--------------------------------acagcagccaacactgcggttagtgcccactccctgggcacagggcgtgtaccagcattgcaagctgcggaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggagtgaatgaggcgagtgtggagcacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgacgccgagttcacttttgtgtccaacctcggtgatagcacaacgcctgggatgctgctgcagtatatgtatgtgccgccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgacccaccccctcaggtgtctgttccgttcatgtcgccagcaacagcctatcagtggttttatgatggctaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcaatgccctaacaacatgatgggtcattttgccatccgaactgtcagtgaatctaccaccgggaaaaacatccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatatagccagac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgagggtggggtaccagcaaacccacaaaggacatctggt------------------------------------------aagtttggccaacagtccggggctgtctatgtaggtaactttagagtggtaaaccgacatctcgccactcataatgattgggcaaatttagtgtgggaaagtagttcacgagatcttctggtgtcctccaccactgctcaaggatgtgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcccagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgctcgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggcggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaagaagccatggaacaaggtgtatcagattatatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggccgttgaaaagatcttgaaaaacttgattaaactgatctcggcgctagtcatagtgattagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacagcatccatcttaggtattcctattgctcaaaaacagagcgcctcttggcttaagaaattcaatgacatggccagtgctgctaagggattggaatgggtttctaacaagattggtaaattcattgactggctcaaagagaagatcataccagcagccagggagaaggttgagttcttgaacaatttgaaacagctacct-ctactagagaaccagatctcaaacctagaacaatctgccgcctcacaagaagatcttgaagtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaattccaaccactgtacgctacagaggctaagagggtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggcacagggaagtctctagcgactggcatcattgcccgcgcgatagctgataaatatcactctagtgtgtactcactcccaccagaccctgaccactttgacggctataagcagcaagtggttactgtcatggatgacctatgtcaaaaccctgacggtaaggacatgtcactattttgccaaatggtgtccaccgtcgacttcatcccaccaatggcttcccttgaggagaaaggggtctctttcacatccaagtttgttatcgcatccaccaatgccagcaacatcatagtgccaacagtatccgactctgatgccatccgccgcagattttatatggattgtgacattgaagtgacagactcatataagacagacctgggtaggttggacgctgggcgagcggccaaattgtgttccgagaacaacacagcaaatttcaagcgttgcagcccgctagtatgtggaaaggccattcagttgagagacaggaaatccaaggtcagatacagcgtggatacagtgatctctgaactcataagagagtacaataacagatccgccattggcaatacgattgaagctttgtttcagggcccacccaagtttagacccattagaatc---agtcttgaggaaataccagctcctgatgccattagtgatctccttgccagcgtggatagcgaagaggtgcgtcagtactgt-agagatcaaggttggattatcccggaaactcctacaaacgttgaacgacacctcaacagagctgtgttagtcatgcaatccatcgccacggtggtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagcgctcaagaaacctgttcttcgtacagcaacagtgcagggtccaagccttgattttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctgggtgtcagagatcgcttggctgtcctcccgcgacattctcagcctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttggagctgactttaattacccttgacactaatgagaaattcagggatatcaccaaatttattccggaaagcatcagtggtgctagtgatgccactctagtaatcaatacagaacacatgccctcaatgtttgtaccagtaggtgacgttgtgcagtatggtttcttgaatctcagtggaaaaccgactcaccgtactatgatgtataactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttattggcattcacataggaggcaatggcaggcaagggttctgtgcgggactcaaaagaagctactttgctagtgaacagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatggaccaactcgcaccaagttcgaacctagtgtgtttcatgacgtctttgagggtaataaggaaccagcagtcttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctctaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagccctccactacgcaaatcagttaaaacagttaagcataaacacctctcagatgagcatggatgaggcttgctatggcacagaaaatcttgaagctattgaccttcacaccagtgcgggatacccctacagtgcgttaggaataaagaagagggatatcttagaccccgctaccagagatgtgagtaagatgaagttttacatggataagtatggtcttgatctcccttactccacctatgttaaggatgagcttcgctcgatagacaaaattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttaccttagaatggcctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagtaaactgccaatcctacttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagtttggttcagagcgttggaaatggtccttagagagataggttatagtgaagaggcaatctcactcattgaagggatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatctatcttcaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaacatggttgcttacggagatgatgtgctcgctagttacccctttccagttgactgcctggaactagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaggttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgcaatactcaggatcacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccagtagggaaagcattggcaattcccaattacgaaaatctgaggcgcaattggctcgaattatttt-----agaggtcaaac-------------------------atac---------------ctcaaccc-caccagag----atctggt------c-g-----cgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064284.1_Coxsackievirus_A6_strain_SHAPHC6188/SH/CHN/15_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---t-cc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttatccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----cacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtatagtccaa-actctgaaatatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctggatcgcacgagacaaagaatgtagcgactg-aagggtctactattaacttcaccaacatcaattactataaagactcttatgcagcatcagctagtaggcaggactttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggctatagtgatcgagtcgcacagttaactgtgggcaattcaaccattaccacccaagaggcagctaacatcgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaaacctactcgccctgacgtgtcggtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcccaatggacaaggattgtacccagattttgctcatactaacccaggtaaaaatggtcaagagttccgagatccttatgtcttggacgctggggtccccctaagtcaagcactggtttacccccaccaatggatcaatttacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttaaaatattgcaatggagctaccacagaagtgccaatcacactaactattgccccacttagttcggagtttagcggcctccgacaggcaataaaacaagggtttcccacagagctcaaacctgggactaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgccagatagaaaccatactagaagtcaataa----------t------accaccggcactaccggg------gtcagtaggttattaatccccgttcgagcgcagaaca------atgtggaccagttatgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcaaatctgtaggtattacactcaatggtctggttcccttaaggtgacctttatgttcacaggctctttcatggctacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgccacaagggaagcagcaatgctcgggacgcatatagtgtgggattttggtttgcagtcatcggtcactctagttataccttggattagcaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtggtaccaccagacacccccactgaggccaacatcatagctcttggagcggcacagaagaactttaccctaaagttgtgcaaggacactgatgagatccaacagacggcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaagtgctgttatcgcacttgc--------------tgacaccacaatatcccgggtg--------------------------------acagcagccaacactgcggttagtacccactctctaggcacggggcgtgtaccagcattgcaagctgcggagacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggagcacttttactctcgtgccgggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtacagcagcggcgcaaactagagctgtcaacatacatgcgctttgacgccgagttcacttttgtgtccaacctcggtgatagcacaacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccaccccctcaggtgtctgttccgttcatgtcgccagcaacagcctatcagtggttttatgatggctaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcaatgccctaacaacatgatgggtcattttgccatccgaactgtcagtgaatctaccaccgggaaaaacatccacgttcgggtgtacatgagaattaagcacgtgagagcctgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatatagccagac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgagggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aagtttggccaacagtctggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcgtaatgattgggcaaatttagtgtgggaaagtagttcacgagatcttctggtgtcctccactactgctcaaggatgcgacaccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgctcgcaaagggacattctgaacccggtgattgtggtggtattcttaggtgccaacatggcgtgattggcatcgtgtccactggcggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaagaagccatggaacaaggtgtatcagattatatcaaa-ggtctcggtgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggccgttgaaaagatcttgaagaacttgattaaactgatctcggcactagtcatagtgattagaagtgattacgatatggtcaccctaacagcaaccctagctctaataggttgccatggtagtccttgggcttggatcaaagctaaaacagcatccaccttaggtattcctattgctcaaaaacagagcgcctcttggcttaagaaattcaatgatatggccagtgctgctaagggattggaatgggtttctaacaagattggtaaattcatcgactggctcaaagaaaagatcataccagcagccagggagaaggttgagttcttgaacaatttgaaacagctacct-ctactagagaaccagatctcaaacctagaacaatctgccgcctcacaagaagatcttgaagtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaattccagccactgtacgctacagaggctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcaccgggcacagggaagtctctagcgactggcatcattgcccgcgcgatagctgataaatatcactctagtgtgtactcactcccaccagatcctgaccactttgatggctataagcagcaggtggttactgtcatggatgacctatgtcaaaaccctgacggtaaagacatgtcactattttgccaaatggtgtccaccgtcgacttcatcccaccaatggcttcccttgaggagaaaggggtctctttcacatccaagtttgttatcgcatccaccaatgccagcaacatcgtagtgccaacagtatccgattctgatgccatccgccgcagattttatatggattgtgacattgaagtgacagactcatataagacagacctgggtaggttggacgctggacgagcggccaaattgtgttccgagaacaacacagcaaatttcaaacgttgcagcccgctagtatgtggaaaggccattcagttgagagacaggaaatccaaggtcagatacagcgtggatacagtggtctctgaactcataagagagtacaataacagatccgccattggcaatacgattgaagctttgtttcagggcccgcccaagtttagacccattagaatc---agtcttgaggaaacgccagctcctgatgccattagtgatctccttgccagcgtggatagcgaagaggtacgtcagtactgt-agagatcaaggttggattatcccggaaactcctacaaacgttgaacgacacctcaacagagctgtgttagtcatgcaatccatcgctacggtggtggcggtagtctcattggtgtatgtcatctataagctctttgctgggttccagggtgcttactccggcgcccccaagcaagcgctcaagaaacctgttcttcgtacagcaacagtgcagggtccaagccttgactttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctgggtgtcagagatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttggagctgactttaattacccttgacactaatgagaaattcagggatattaccaaatttattccggaaagcatcagtggtgctagtgatgccactctagtaatcaatacagaacacatgccctcaatgtttgtaccagtaggtgacgttgtgcagtatggtttcttgaatctcagtggaaaaccgactcaccgtactatgatgtataactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttatcggcattcacataggaggcaatggcaggcaagggttctgtgcgggactcaaaagaagctactttgctagtgaacagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatggaccaactcgcactaagttcgaacctagtgtgtttcatgacgtctttgagggtaataaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctctaagtacgtggggaacacattacacgagcctgatgagtacatcagagaggcagccctccattacgcaaatcagttaaaacagttaaacataaacacctctcagatgagcatggatgaggcttgctatggcacagaaaatcttgaggctattgaccttcacaccagtgcgggatatccctacagtgcgttaggaataaagaagagggatatcttagaccccactaccagagatgtgagtaagatgaagttttacatggataagtatggtcttgacctcccttactccacctatgttaaggatgagcttcgctcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttaccttagaatgacctttgggcacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagtaagctgccaatcctacttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagtttggttcagagcgttggaaatggtccttagagaggtaggttatagtgaagaggcaatctcactcgttgaagggatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaattcgatgattaacaacatcatcattagagcgttgctcattaaaacattcaagggtattgatctggatgaactcaacatggttgcttacggagatgatgtgctcgctagttacccctttccaattgactgcctggaactagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaggttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgaacaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgtaatactcaagatcacgtgcgatccttatgcatgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccagtagggaaagcattggcaatccccaattacgaaaatctgaggcgcaattggctcgaattatttt-----agaggtcaaac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064289.1_Coxsackievirus_A6_strain_SHAPHC5332/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccatccaca-gggcccac-t-gggcgctagcacactgattttatggaatctttgtgcgcct-g-ttttata-----acccc---t---cccc-c---a-aaact-gtaacttagaaga------------acatcacactacc-gatcaa-tagcaggcatggcgcgccagccatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-caccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctggtcctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcatcagctagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgtggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaatattgtgttgagctacggggagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggcttctgcatgcacgttcagtgtaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaaccaataactgcgcgaccattattatgccatatgtcaacgcgcttccatttgattcagcgcttaaccactcaaattttggattggtagtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggtctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggagagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------c------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatgatcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccactacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcacagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggttggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaacgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaagctaccaccgggaaaaatgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---cactacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagcatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactctagaaggaaacactatccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaag-gggctcggtgacgcattcggtactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaagcaactgcca-ttgttggagaaccagatctcaaatctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctctggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggttccccaggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagtaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaactttaaacgctgcagcccactagtgtgtgggaaggccatccaattaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgctgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaagcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctagtcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtactctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacggatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccactctagtaattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggcttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcggggcttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagactttgaacaggcattgttctccaagtatgtaggaaacactatacatgaacctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagataatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctatatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcagtagataagatcaagaaggggaaatcccgcttaattgaagctagcagcttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaaattgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtgacgaggcagtctcactcatcgaggggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggcgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaattagcaagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgcctattggcgtggcacaacggcaaacaagaatatgaaaaattcgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064290.1_Coxsackievirus_A6_strain_SHAPHC5310/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-ta--a-aaact-gtaacttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccat-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaaatttcaacagaaaaatctgggtcacacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggtcgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagttacggagagtggccagaatattgcccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgcttaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgttaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctactacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgagccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatattagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtggaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgcccagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctgaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacaccgcagctagcacccactccctgggaacagggcgtgtgccagcattacaagcggcagaaacgggagcaagctctaacgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacatttttactctcgtgcagggttggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaacgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaagctaccaccgggaaaaatgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---cactacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgctactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcagggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgtaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcatctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggtgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagactacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtatctagggaggtggaggctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaatcaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaacccttacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggcttaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtacctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcgcttccgccagatccagaccattttgatggttacaaacagcaagtggtcacagtcatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatccaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagggctgccaaactatgctctgaaaataacacagcaaacttcaaacgctgcagcccactagtgtgtgggaaggccatccaattaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatctatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggcgcgtattctggcgctcctaagcaagtgctcaagaaacccatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctactagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaatccacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaagctcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaacttttcatgcaaaccctgggactgtgactggatcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggagggatgccatcaggttgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtgcttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgtaattggctcgaattattct-----agaggttgaat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289370.1_Coxsackievirus_A6_isolate_CV-A6/P2/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-taagaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcacacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcatcagctagtaggcaggattttgcacaagatcccgcaaagttcacacgccctgtcttggacaccatcagggaggtcgcagccccgttgcaatccccttctgttgaggcgtgcggttacagtgatcgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagagtattgtccctccacggacgctacagctgtggacaaacctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaagtattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaggcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaacaa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtgacctttatgttcacgggttcttttatggccacagggaaaatgttgatagcctacacaccacctggtagtgctcagcccgctacgagggaaacagcaatgcttgggactcatatagtatgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaaaactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatatcccgagtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctaaagctgtcaacatacatgcgctttgatgccgagttcactttggtgtccaacctcaatgtcagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatcaaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataattaacactgcaactgaccgtgcaagtataac---caccacggattatgaaggcggggtaccagcaaaccctcaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccacccataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgctcgatgtgattgtcaaacaggagtgtactactgcaactctagaaggaaacactacccggttagtttttataagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacactctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtattgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggcgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacttggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacccgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaactttaaacgctgcagcccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaagaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgc-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacggatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgtcactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccactctagtgattaacacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtggattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcagatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaaaagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaagggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactattcgggctatgacgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacgataacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttaccctttccccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgcctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289371.1_Coxsackievirus_A6_isolate_CV-A6/P223/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactccgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tatttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcttacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcatgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagaccccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttacagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatattgtccctccacggacgctacagctgtggacaaacctactcgccctgacgtgtcagtgaataggttctatacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctgaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaagtattgtaatggagctaccacagaggtaccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataacacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccaattgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtgacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccagaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcactcactccctgggaacagggcgtgtgccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaatcttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctagatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatacgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagcgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccacccctgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttataagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattttgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatctcttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatccgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcgtccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacttggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgtcaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaactttaaacgctgtagcccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgtcaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctattctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacggatcaagggcatttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagagaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtataacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggggctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtgtttcatgatatttttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatataggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaaaaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttgattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatctattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggcttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcgcgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggtaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF682362.1_Coxsackievirus_A6_strain_SZc173/13_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccactcaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggaccgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-acccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggtgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtgttgagctacggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagtcctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccgggaaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagcccattaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcaacccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaatttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcactcactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactaa----cctggatgggtacacagtttggcctgtagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgatagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggctcctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaatgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaaaaactacccgacatacagccaaac----aataactaacactgcaactgatcgtgcaagtataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgggatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaaacctagtctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcatctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttaaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaatctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgtcattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaactttaaacgctgcagcccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcatacctgaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacgattgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatctctactgagaaggaacatcaggcaggttcagacggatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctagtcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggattctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgacctccacactagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcagggacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaataa-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ541157.1_Coxsackievirus_A6_isolate_4645/SH/CHN/2012_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggttttgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgactctgaacaatagaaa-------atgggcgcccaagtttcaacagagaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaactttaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagttcacacgccccgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacgagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcattggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccgccaatactgcccggttttgaaccaactccattgattcacattcctggtgagtttacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggtccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagattggaggggtatacgactactacgcaaccgggatcgtcaccatttggtatcaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgccgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaacctcattgagactcgctgtgtgatgaatcgaaatggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaagtatctgtcccgttcatgtcgccagcaacggcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcctgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggccatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgtgatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgctaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaacgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcgctcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgttatcgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagcccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaagaaacatcaggcaggttcagacggatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaacttgtgaacgtcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccactctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagtctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggcacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccccgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggtcgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcgagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgctttaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064291.1_Coxsackievirus_A6_strain_SHAPHC5298/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagtaccattgaagctgcggagtgtttcgctcagca--ctc-tccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatactggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaatagaag-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagttacggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgtacagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacaaagcctaatggacaaggattgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccaccaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctggaaccaatcaatttctcacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacatccccggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccactgga------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggactttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaactttgtagtgccaccagacacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcaaagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagttagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagacccgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggtactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccactttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcagggatgtgataccattacccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcccagtctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcacacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatgggcttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagactacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaggctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaactgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttgggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagatcagtaaatttattgattggcttaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccgggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagaccactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttggaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataagacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagcccactggtgtgtgggaaggccatccaattaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgtttcagggaccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaactcctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacggtcgttgcagtagtctcactggtgtatgttatttacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcaaggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggttaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggagatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcagggcagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaagctcgaacctagtgtgttccatgatatcttcgagggcaacaaggaaccggcggtcttacacagcaaagaccctcgcctcgaggtagatttcgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaagctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaacttttcatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtaacgaggcagtttcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaacttaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacaggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggcttgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289385.1_Coxsackievirus_A6_isolate_CV-A6/P66/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccactcaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctgttggattggccatccgg--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaattacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagttacggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtcgttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcgctggtttatccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactctaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaaggatttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagcagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggacccatatagtgtgggactttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgttaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagaataccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtatacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcagggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgtaactctagaaggaagcactacccggtcagtttttctaagcctagcctcgtcttcgtagaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattccgaacccggggattgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagactacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaggctcttaagaactaccttatagggtctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagccttagtcatagtgattagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgccatggcagcccctgggcgtggatcaaggctaagacagcatcaatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggcttaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatttcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaggaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagaccactttgatggttacaagcagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttggaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagtccactagtgtgtgggaaggccatccaattaagggataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggacagtgaagaggtgcgccaatactgt-agagatcaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagcagagctgtgctaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatatgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggacgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtgggaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtgggggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacattaacgggccaactcgcaccaagctcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggaactagttcttagagagataggctacggtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccatttttaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctgttggcgtggcacaacggcaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----cgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289369.1_Coxsackievirus_A6_isolate_CV-A6/P169/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaattaagaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccgggtcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgcccgttacccggctaactacttcgagaaact-tagtagcgccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgctcaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaaattcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctgaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaattcccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctgagtcaagcactggttttcccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatactgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctggaaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtggaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcagatattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcgtcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcactatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactacagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctccaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcaatatatgtatgtaccaccaggggcccctaagccggatagtaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccattcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcagtatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattctcaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagactacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaatcaaatctcaaatctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgactctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagcagccaaattatgctctgaaaataatacagcaaactttaaacgctgcagcccactagtgtgtgggaaggccatccaactaagagatagaaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaggcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggctggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacgatcgttgcagtagtttcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacattaggcaggttcagacggatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcatatagggggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagactaaacatcaacgggccaacccgcaccaaactcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctatggtacagacagtctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccggacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctatggtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcgagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtgagtgcaataagatctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289367.1_Coxsackievirus_A6_isolate_CV-A6/P115/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaataaacaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aaggatctactatcaactttaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcccagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatattgtccctccacggatgctacagctgtggacaagcccactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacattcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accgctggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcgtcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaaccttcatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaacttcaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaacgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtgccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcagcagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgccaaatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatccagccaaac----aataattaacactgcaactgaccgtgcaagcatatc---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatttatgtaggtaacttcagagtggtaaaccgacatctcgccactcacaatgattgggcaaatctagtatgggaaagtagctcacgagatcttcttgtgtcctccaccactgctcaaggatgtgataccattgctcgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttataagcctagcctcgttttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaaggggcactctgaacccggggactgtggtggcattgttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctattgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaatctggagcagtccgccgctgcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttacgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtggattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgactctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagaattgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaactttaaacgctgcagcccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttaggtacagtgtggatacggtggtttcagagctcataagggaatacaacaacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagatcaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacggatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcacagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacttagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggcttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtgtttcatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatattttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgagactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtgagtgcaattaggtccgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattatttt-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064293.1_Coxsackievirus_A6_strain_SHAPHC5219/SH/CHN/14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccactcaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaatt-gcaacttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggactgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgtgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtgcagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagtttacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtgttgagctacggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggccaaaacgcccaattccactacttgtaccgctcgggtttctgtatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgttttggatgctggtgtccccctaagtcaagcattggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggtagtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagtggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcatattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgtaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcatttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----tctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgacgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgttgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgtccgggtgtacatgagaattaagcacgtgagagcttgggtacctagacccctccgatcccaagcttatatggtcaagaactacccgacatatagccaaac----aataactaacactgcaactgaccgtgcaagtataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgactgggcaaatctagtatgggaaagtagctcacgagatctcctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactccagaaggaaacactacccggttagtttttctaagcctagcctcgttttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatgggcttgtcgggtttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctattgcccagaagcagagtgcgtcatggctcaagaagttcaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaatctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaacgagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggctccccaggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtagattagatgctggaagagctgccaaattatgctctgaaaataacacagcaaactttaaacgttgcagcccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagttcagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctagtcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaaacaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagtcttgattttgccctatccctactgagaaggaacatcaggcaggttcagacggatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcctggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctgatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtaattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatatggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagcgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaacttgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaggaccctcgcctcgaggtagattttgaacaggcattgttctctaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgacctccacactagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaatcctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacagtaacgaggcagtctcactcatcgaagggatcaatcacacacaccatgtatatcgcaacaaaacttattgcgtacttggcgggatgccatcaggctgttcaggaacatccatttttaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggcttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289373.1_Coxsackievirus_A6_isolate_CV-A6/P246/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-taacaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaactttaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgtcctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataattgcgcgaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgttgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccctactgaggctaatatcatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgatgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgggcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaaccttaatgacagcacgacgcccgggatgctgctacagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcataaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctacccccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaaccctgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatttatgtaggtaattccagagtggtaacccgacatctcgccactcataatgattgggcaaatttagtatgggaaagtagctcacgagatcttctggtgtcctccacccctgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccagttagtttctataagcctagcctggtttttgtggaagctagtgagtattcccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaggctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggccaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggcttaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatatttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgacctatgccaaaatcctgatggcaaggatatgtcactcttctgccagatggtatccaccgtggattttatcccaccaatggcttctttagaagagaaaggggtctcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagcccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaattatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcactaagttcattccagaaaatatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggcttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggggagatccaatgggtgaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaagctcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcggtagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttaaatgactcagtttacctcagaatggcctttggacatctctacgaaactttccatgcaaaccctgggactgtgactggttcggctgtggggtgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtgacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccttttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289378.1_Coxsackievirus_A6_isolate_CV-A6/P360/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcgt-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatattgtccctctacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagtagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcacttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccactcaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactgtcaccaccggg------ggcagtagattattaatccccgttcgagcacataaca------atgtggaccagttgagcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcgggcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcaccccgctacaagggaatcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattattaacacccattttagaacagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgagtg--------------------------------accgcagccaacactgcagctagtacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcggggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctggagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaaacacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcgactgaccgtgcaagtataac---caccacggattatgaaggcggggtgccatcgaacccacaaaggacatatggt------------------------------------------aggttaggccaacagtccgggggtatctatgtaggtaacttcagagtggtaacccgacatctcgccaatcataatgattgggcaaacctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcagcgatgtgataccattgcccgatgggattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttataagcctagcctcgtttttgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggcttggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaggctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggcttaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------tttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaagtaccactctagtgtgtactcacttccgccagatccagaccactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgacggcaaggacatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcgttcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagcccactagtgtgtgggaaggccatccaattaagagataggaagtccaaagttagatacagtgtggatgcggtggtttcagagctcataagggaatacaacaacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaattatgcaatccatcaccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaaacaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacggatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaatctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacatatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggtaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaattcgcaccaagctcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctagatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttgggaatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtgacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaa-ttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289376.1_Coxsackievirus_A6_isolate_CV-A6/P345/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgcg-ggtttcgttccac-----tcaccag--------------tcgtgcagttcat-actctaaagtacattctgattttgaacaatagaaa-------atgggcgcccaaatttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggtaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaatagattctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccctctaagtcaagtactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattagttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagtggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgaatttacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgcgcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaagtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttgtgcccaaaccaccttcgtaatgccaccagatacccccactgaggctaatattatagatcttagagcagcacagaaaaactttaccctaaagttgtgcatggacactgacgagatccagcaaacagcagagtaccaaaatgattcc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgaaagccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaagtgaaggactcgggcattag----cctggatgggtacacagtctggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatatatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcaccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaggcttatatggtcaagaactacccgtcatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaacccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccacccctgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttataagcctagcctcgtttttgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggcctgtggtggcattgttagatgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaattgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttacgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattatatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcgtgatggcaaggatatgtcactcttttgccagatggtatccaccgtagat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>KY126090.1_Coxsackievirus_A6_isolate_DY005R/Shandong/China/2015_complete_genome
-----------------------------------------------------aca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----accct---c---cc-------a-aaact-gtaacttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagaccccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggttacagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaatattgtattgagctacggagagtggccagaatattgtccctccacagacgctacagctgtggacaaacctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgatacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggctctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaagtattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggtttcgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcaatagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtgacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgcccagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagattggaggggtatacgactactacgcaaccgggaccgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaattttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactcccgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagttagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaataacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaaaccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatgctcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtctggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttttggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatgggcttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttatagggtctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatttcaaacttggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaagagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctccccaggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcgcttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagat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>KY126091.1_Coxsackievirus_A6_isolate_LW03R/Shandong/China_/2015_complete_genome
-----------------------------------------------------aca-gggcccac-t-gggcgctagcacactggttctacggaatctttgtgcgcct-g-ttttata-----accct---c---cc---------aaact-gtaacttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagaactttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtgcattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatattgtccctctacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacgagggttgtacccagacttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattgctaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccatttcagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatctggtaccaaaccaacttcgtagtgccaccagacacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgtaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagttagagctgtcaacatacatgcgttttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacacccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaaaccggatagcaggaaatcgtatcaatggcagactgctactaatccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgttccgttcatgtcgccggcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagacctcttcgatcccaagcttatatgatcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacacctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccactactgctcagggatgtgataccattgcccgatgtgattgtcaagcaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaggctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcacggcagcccctgggcatggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggcttaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgcgca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtgtgtcttatcatcagaggctccccaggcactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagaccactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgacggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacttctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacattgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattgtgctctgaaaataacacagcaaacttcaaacgctgcagcccactagtgtgtgggaaggccatccaattgagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctgggtttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacttagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaagctcgaacctagtgtgttccatgatatcttcgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagacacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgatcttcacactagtgcaggctatccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggctttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggttatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtactaggtgggatgccatcaggttgttcaggaacatccatattcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtacttgctagttaccctttccccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaggaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-a-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064294.1_Coxsackievirus_A6_strain_SHAPHC5908/SH/CHN/15_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactggttctatggaacctttgtgcgcct-g-ttttaca-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atgtcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggaccgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcgccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttgtattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----tttgta-ggttttgttccac-----tcaccag--------------tcgtacaattcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacggaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtgttgagctacggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcgactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcatgttcagtgcaatgcaagcaagttccatcagggggccctcttagtagctgcaatccccgaatttgtggttgctgcaagcagtcctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccgggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagcccattaaaatattgtaatggagctaccacagaggtgccaatcacactaaccattgccccacttaactcggagtttagtggcctccgacaagcaataaaacaagggtttcctacagagctcaagcctgggaccaatcaatttcttacaactgacgacgggacatctccaccgatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacttctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccactggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtagaccagttgtgcgcatcattccaagtagaccctgggcgcaatggtccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacactcattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtatcaaaccaatttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccttaaagctgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcggtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagctaacactgcagctagtactcactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactaa----cctggatgggtacacagtttggcctatagatgtgatgggcttcgtgcagcagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgatagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggctcctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagcgatccacccccccaggtatctgtcccgttcatgtcgccagcaacagcttatcagtggttctatgatggttaccctacatttggtgagcacaaacaagccaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctacaaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgatcgtgcaagtataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcaagagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaattctagaaggaaacactacccggttagtttttctaaaccaagtctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacacggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggttggatgaagaggctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtatctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttagcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaaaacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaaatttaacgacatggctaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttaaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaatctggagcagtctgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaatatcactctagtgtgtactcacttccaccagatccagatcactttgatggttacaaacagcaagtggtcacggttatggacgacctatgccaaaatcctgatggtaaggatatgtcactcttttgccagatggtgtccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgtcattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgtgacatcgaagtaacagactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaactttaaacgctgcagcccactagtatgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacagtggtttcagagctcataagagaatacaataacaggtctgccgttggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcatacctgaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacgattgttgcagtagtctccctggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatctttactgagaaggaacatcaggcaggttcagacggatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctagtcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgctaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcactatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggattctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtgttccatgatatctttgcgggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgacctccacaccagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccactagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagtagtttgaatgactcagtttacctcagaatgaccttcggacatctctatgaaactttccatgcaaaccctggaactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcaggctatgatgctagtctcagcccagtttggtttagagcattagagctagttcttagagagataggctacggtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggtcgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttgactatgactcctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtaagtgcaattaggtccgtcccaataggaaaagcacttgctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaataa-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064296.1_Coxsackievirus_A6_strain_SHAPHC6022/SH/CHN/15_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-cc--a-aaact-gtaacttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctt-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaaccca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctaaacaacagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtccactatcaacttcaccaacatcaattactataaagattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttagataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagttacggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacgg------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgctcaatttcactacctgtaccgctcgggtttctgcatgcacattcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatttacgaaccaataactgtgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggaatttagcggcctccgacaagcaataaaacaagggtttcccacggagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgagccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaacaa----------t------accactggcaccactgga------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggctcccttaaggtaacctttatgttcacgggttcctttatggccacagggaaaatgctgatagcctatacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggactttggtttgcaatcatcggttaccctagttataccttggattagtaacacccactttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcactatttggtaccaaaccaactttgtagtgccaccagacacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacgatatcccgggtg--------------------------------accgcagccaacactacagctagcacccactccctgggaacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagacccgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctagtaggagttgtggaggtaaaagactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcagtgacagcacgacgcctgggatgctgctgcagtatatgtatgtaccaccaggagcccctaagccggatagcaggaaatcatatcaatggcagactgctaccaacccgtcagtattcgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggcgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgctatccgaacagtcagtgaatctaccaccgggaaaaacgttcacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtgggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatctactggtgtcctccaccactgctcagggttgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcccagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcacacctcatgcttgcgaagggacattctgaacccggggactgtggtggtattctcaggtgccaacatggcgtgattggtatcgtatccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagccatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaggctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaactgatctcagcattagtcatagtgatcaaaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccccatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgatatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggcttaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataatcgcccgagcaatagctgataaataccactctagtgtgtactcacttccgccagatccagaccactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttctgccagatggtatccaccgtagattttatcccaccaatggcttctttggaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagggctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagcccactagtgtgcgggaaggccatccaattaagagataggaagtccaaagttaggtacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccagggttggatcataccagaaactcctaccaacgttgagcgacatctaagtagggctgtgctaattatgcaatccatcgccacggtcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcaaggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttcttccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgcagctagtgacgccaccctagtgattaatacagaacacatgccctcaatgttcgtacctgtgggagatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggtaatggtaggcaaggtttctgtgcaggactcaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagagactgggagacttaacatcaacgggccaactcgcaccaagctcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacaccatacacgagcctgatgaatatatcaaggaggcagccttacattacgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaagctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccctactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtctacctcagaatggccttcggacatctttatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctttttgcttttgactactcgggctatgatgctagcctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggcaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacaggcaaggagtatggtttaaccatgacccccgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggcttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------cttaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064307.1_Coxsackievirus_A6_strain_SHAPHC5971/SH/CHN/15_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcacactgattctacggaatctttgtgcgcct-g-ttttata-----acccc---t---cccc-c---a-aaact-gtaacttagaagt------------atatcacactact-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgtttcac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattttgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctatggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactctcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggccgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccgggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaacgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaaccattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttctaacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcactaccggg------gttagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtactacactcaatggtcaggttcccttaaggtgacctttatgttcacgggttcttttatggctacagggaaaatgttgatagcctacacaccaccaggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggtcaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaactgggatcgtcaccatttggtaccaaaccaacttcgtggtgccaccagatacccccactgaggctaatatcatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagtgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtctaaccttgatgacagcacgactcccgggatgctgctacagtatatgtatgtaccaccaggggcccctaagccggatagtaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaagttgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagccaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgtacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgttcatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtgccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggccatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagcttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcggatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaggctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagtccctgggcgtggatcaaggccaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggaaaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaagcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttataaacagcaagtggtcacagttatggacgacctatgccaaaatcctgatggcaaggatatgtcactcttctgccagatggtatccaccgtggattttatcccaccaatggcttctttagaagagaaaggggtctcattcacatccaaatttgttattgcatccactaatgctagtaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgtgacatcgaggtaacggactcatacaaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgagaataacacagcaaacttcaaacgctgcagcccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagcttataagggaatacaataacaggtctgccattggaaacacaatcgaagcgctgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccggatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaactcctaccaacgttgagcgacatctaagtagggctgtgctaattatgcaatctattgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacccagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttggcagttctcccgcgccactcgcaacccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaacgagaaattcagagatatcaccaagttcattccagaaaacatcagtgctgctaatgacgccactctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcggggcttaagaggagctattttgctagtgagcaaggggagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacggaccaactcgcaccaagctcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcgttgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttgcattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaaattctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgttcggtagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttaaatgactcagtttacctcagaatggcctttggacatctctacgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaatccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtgacgaggcagtctcactcatcgaagggatcaatcacacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcacgaacgggtaaggagtatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttctcaagagaggtttcttgcctgatgaacaatttccttttttgattcatcccaccatgccaatgaaggagattcatgagtccattcggtggaccaaggatgcacgtaatactcaagatcacgtgcgatccttgtgtctattggcgtggcataacggcaaacaagaatatgaaaaattcgtaagtgcaattaggtctgttccaataggaaaggcactggctatcccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064308.1_Coxsackievirus_A6_strain_SHAPHC5962/SH/CHN/15_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atatcacactacc-gatcaa-cagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ttccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatatcggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgtta-----tactcg----ttcgtg-gatttcgtttcac-----tcaccag--------------ccgtacagttcac-actctaaagtacattctgattttgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggactcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatattgtccttccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatccactggctggtactggaaattccctgatgtactaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaacggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatttacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggttccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattaattcacattcctggcgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggtaccaccggg------gtcagtagattactaatccccgttcgagcgcagaaca------atgtggatcagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtgacctttatgttcacgggttcttttatggccacagggaaaatgttgatagcctacacaccacctggcagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaatacccattttagagcagttaagactggaggggtatatgactactacgcaaccgggatcgtcaccatttggtaccaaactaacttcgtagtgccaccagatacccccactgaggctaatatcatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---agagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagtcgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagttagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaaccttaatgacagcacgacgcccgggatgctgctacagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcagtggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgtacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgttcatgagaattaagcacgtgagagcttgggtacctaggccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctggtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagcttttctaaacctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcgggtttgcagatatcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaggcccttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccctggcactcatagggtgtcatggcagtccctgggcgtggatcaaggccaagacagcatccatcttaggcatccctatcgctcagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagcaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgaacaacctaaaacaactgcca-ctgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccgctttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcacttcgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttctgccagatggtgtccaccgtggattttatcccaccaatggcttctttagaagagaaaggggtctcattcacatccaaatttgtcattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctatatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggctagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagcccactagtgtgtgggaaagccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagcttataagggaatacaataacagatctgccattggaaacacaattgaagcgctattccaggggccacccaagtttagacccattaggatt---agccttgaggaagcaccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctactaacgttgagcgacatctaagtagggctgtgctagttgtgcaatccatcgccacgatcgttgcagttgtctcactagtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgctttatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgaaaccaatgagaaatttagagatatcaccaagttcattccagaaaacatcagtggtgctagcgacgccactctagtgattaatacagagcacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcagggcagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggcttctgtgcgggacttaagaggagctattttgctagtgagcaaggggagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacggaccaactcgcaccaagctcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagctgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcggtagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttaaatgactcagtttacctcagaatggcctttggacatctctacgaaactttccatgcaaaccctgggaccgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtgacgaggcagtctcactcatcgaggggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggagaatgcaacctttcttaagagaggtttcctgcctgatgaacaatttccttttttgattcatcccaccatgccaatgaaggagattcatgaatccattcggtggaccaaggatgcacgcaacactcaggatcacgtgcgatccttgtgtctattggcgtggcacaacggcaagcaagagtatgaaaaatttgtaagtgcaatcaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------gcac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064297.1_Coxsackievirus_A6_strain_SHAPHC6069/SH/CHN/15_complete_genome
------------------ttaaaa--cac-cct-gtgggttg-c-acccacccaca-gggcctac-t-gggcgttagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atattacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaataggaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaatttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgctgcaatctccttctgttgaggcgtgcggttatagtgaccgagttgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagttacggagagtggccagaatattgtccctccacggatgctacagctgtggacaaacctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgttaaatgacacaggagtatttggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcccaatggacaagggctgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggccttcgacaagcgataaaacaagggtttcccacagagctcaagcctggtaccaatcaatttctcacaactgatgacgggacgtccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccactgga------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttccctcaaggtaacctttatgttcacaggttcttttatggctacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctggttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaactttgtagtgccaccagacacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgtaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactctctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagacccgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtgccaccaggggcccctaagccagatagcaggaaatcatatcaatggcagaccgctactaacccgtcggtattcgcaaaactgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcaacggcttatcagtggttttacgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatccaccaccgggaaaaacgtccatgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aagtttggtcaacaatccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttttggtgtcctccaccactgctcagggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcccagcctcgttttcgtggaagctagtgagtattaccctgccaggtatcagtcacaccttatacttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgttggatttgcagacgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcatttggaactggctttactgatgcagtggctagggaggtggaggctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaagttgatctcagcactagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgccatggcagcccctgggcgtggatcaaggctaagacagcatccatcttgggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagatcagcaaatttattgattggcttaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagaccactttgatggatacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttggaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaacatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagcccactagtgtgtgggaaggccatccaattaagggataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattagaatt---agccttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaactcctaccaacgttgagcgacatttaagtagggctgtgctaatcatgcaatccattgccacggtcgttgcagtggtctcactggtgtatgttatctacaagctttttgctggatttcagggtgcgtattctggcgctcctaagcaggtgctcaagaaacctatcctccgcacggcaacagtgcaaggacctagccttgatttcgccctatccctactgagaaggaacatcaggcaggttcagacagaccaagggcacttcactatgctgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagtgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggagatgtcgtacaatacggtttcctgaatctcagtggaaagcccacccatcgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttgggaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgccagtgagcaaggagagatccaatgggtaaagtctaacaaagagactggaagattcaacatcaatgggccaactcgcaccaagctcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacacgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggcacagacaaccttgaagctattgaccttcacactagtgcaggctacccctacagcgccttgggaatcaagaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacttatgttaaggatgagctacgctcaatagataagatcaagaaggggaagtcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggttcagagcattggagctagttcttagagagataggctacggtaacgaggcaatctcactcattgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcctattgactgctcagaactagcaagaacaggcaaggagtatggtttaactatgacccccgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcatgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattatttt-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430796.1_Coxsackievirus_A6_strain_CVA6/Homo_sapiens/VNM/1.2/2014_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctacggaatctttgtgcgcct-g-ttttata-----acccc---t---ttcc-c---a-aaact-gtaacttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tccccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctacggagcgtttcgctcagca--ctc-cccta---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctaattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctaccatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagagaggttgcagccccgttgcaatccccttccgtcgaggcgtgcggttatagtgaccgagtcgcacaattgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatactgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccagttccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcaaggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagattttgctcacactaacccaggtaaaaatggtcaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccaccaatggatcaatctacgaactaataactgcgcaaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctactacagaggtgccaatcacattaactatcgccccacttaactcggagtttagcggcctccggcaagcaataaaacaagggttycccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccgccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgccaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggatcagttgtgcgcatcattccaagtggaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgtaggtattatactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctatacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctggttataccttggattagtaacacccactttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagacacccccactgaggctaatattatagctcttggagcagcacaaaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgacccc--------attacaaatgcagtgg---aaagcgctgtgagcgcacttgc--------------tgacactacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgcgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggttggtaggagttgtggaggtgaaagactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaagtatctgtcccgttcatgtcaccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaatatgatgggccattttgccattcgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtatacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatctcaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaaacataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgattgtcaaacgggagtgtattactgcaactctagaaggaaacactacccggttagtttctctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcaatcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaacggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactatcttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtaatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggctaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggaaaaccaaatctcaaacctggagcagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacggttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttctttagaagagaaaggggtctcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacggtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattgtgctccgaaaataacacagcaaacttcaaacgctgcagcccactagtgtgtgggaaggccatccagctaagagataggaagtccaaagtcagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaaatttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgaccttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctagtcatgcaatccatcgccacgattgttgcagtagtttcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatccttcgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgttagggaccgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcatgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacattagcgctgctagtgacgccaccctagtgattaacacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtgcaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctaccaaggcaggacagtgtggaggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagtctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgagcctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtggattttgagcaggcattgttctccaagtatgtaggaaacaccatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacatcttagaccccaccaccagggatgtgagtaagatgaagttttacatggataagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaagggaaatcccgcttaattgaagctagcagtttgaatgactcagtctacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgcaacccagacgtgttctggagcaagttaccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctggttcttagagagataggatacggtaacgaggcggtatcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtgcttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgacccctgcagacaagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaggaatatgaaaaatttgtaagtgcaattaggtctgtcccaatagggaaggcactggctattccaaattatgaaaacctgagacgcaattggcttgaattattct-----agaggttgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430802.1_Coxsackievirus_A6_strain_CVA6/Homo_sapiens/VNM/4.2/2014_polyprotein_gene_partial_cds
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgcagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-acttcaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcactaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatctccttccgtcgaggcgtgcggttatagtgaccgagttgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattaagctacggagagtggccagaatactgtccttccacggacgctacagctgtggacaagcctactcgccctgatgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggcttctgtatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagattttgctcacaccaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcaaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccggcaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccgccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggatcagttgtgcgcatcattccaagtagaccctgggcgcaatggtccgtggcaatccacaatggtcggtcagatctgtaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgcccagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctggttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcacttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggtactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctatcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtacgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcaccagcgacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccatgttcgagtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatctcaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtacaagcataac---caccacggattatgaaggcggggtgccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcgaatctggtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgtcaacatggcgtgattggtatcgtgtccactggtggcaacggacttgtcggatttgcagatgtcagagaccttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggtttcactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggagctgttgaaaagatcttgaagaatttaatcaaattgatctcagcattagtcatagtgatcagaagtgattatgatatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggattaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggttttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggaaaatcaaatctcaaacctggagcagtccgccgcttcacaagaagaccttgaagcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagat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>KX430799.1_Coxsackievirus_A6_strain_CVA6/Homo_sapiens/VNM/3.1/2014_polyprotein_gene_complete_cds
-------------------------------------------------------------------------------------------------------------g-ctctgca----------------------------------------------g------------atatcacgctacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tttccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaaccca-ggggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-gagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccctccacggatgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggcttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggctctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagattttgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcattggtttacccccatcaatggatcaatctacgaactaataactgcgcaaccattatcatgccatatgtcaatgcgctaccatttgattcagcgcttaaccactcaaattttggattggttgtaatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccggcaagcaataaaacaagggtttcccacagaactcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccgccaatactacccggttttgagccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------acgtggatcagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgtaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgccacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggtcaccctggttataccttggattagtaatacccactttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatctggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcacttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagccagtacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaacctcattgagactcgctgcgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcaggactggtgggagttgtggaggtgaaggactcgggcaccag----cctggatgggtatacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagaactgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgttgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtatttgcaaaattgagtgatccacccccccaggtatctgtcccgtttatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaatatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatctcaagcttatatggtcaagaactacccgacatatagccaaac----aataactaacactgcagctgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcgaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacaccttgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtatccactggtggtaacggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactatcttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaacccttacggcaaccttggcactcatagggtgtcatggtagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggaaaaccaaatctcaaacctggagcagtccgccgcttcacaagaagaccttgaagcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccaccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggattgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagcccgctagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtctcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaagcgccagcgccagatgttattagtgaccttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaacaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacataaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaatttagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtgggaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtagacaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagtctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgagcctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacatcttagaccccaccaccagggatgtgagtaagatgaagttttacatggataagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataaaatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttatctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgaccggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgccagtctcagcccagtttggtttagagcattggagctagtccttagagagataggctacagtaatgaggcagtatcactcatcgaagggatcaatcatacacaccacgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaataacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagagctagcaagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgagggagattcacgaatccattcggtggactaaggatgcccgcaacactcaagatcacgtgcgatccttgtgtctattggcatggcacaatggcaaacaggaatatgaaaaatttgtaagtgcaattaggtctgtcccaatagggaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattatttt-----agaggatgaat-------------------------acac---------------ctcaaccc----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX064295.1_Coxsackievirus_A6_strain_SHAPHC5947/SH/CHN/15_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcacactgattctacggaatctttgtgcgcct-g-ttttata-----acccc---t---cccc-c---a-aaact-gtaatttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccatcgaagctgcggagtgtttcactcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggtgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacataccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagtttat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgaaacaaagaatgtagcgaccg-aagggtccactatcaacttcactaacatcaattactataaggattcttatgcagcgtcagctagtagacaggacttttcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatattgttcctccacggacgctacagctgtggataagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtatttggtcaaaacgcccaataccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatgggcaagggttgtacccagatttcgcccacaccaacccaggaaaaagtggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaacgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagccaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacatccctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatattagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagctgtgcaaggacaccgacgagatccagcaaacagcagagtaccaaaatgatccc--------attgcaaatgcagtgg---aaagcgctgtgagtgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccattcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgttcacgttcgggtgtacatgagaattaagcacgtgagggcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattacgaaggcggggtaccagcaaacccacaaaggacatctggc------------------------------------------aggtttggccaacagtccggggccatttacgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgcccaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctggcctcgttttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcaaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtggttggtatcgtatccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctctcaagaactaccttataggatctgaaggggctgttgaaaagatcttgaaaaatttaattaaattgatctcagcattagttatagtgatcagaagtgattatgatatggtaaccctcacagcaaccttggcactcatagggtgtcacggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaacgctgccaagggatttgagtggatttctaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactccca-ttgttggagaaccaaatctcaaatctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgccca---------cttctgccgtaaataccaaccactttacgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcactcccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctctagaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacattgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaactttaaacgctgcagcccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttctgagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccagggaccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgaccttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgttaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgtcatctacaaactttttgctgggtttcagggtgcgtattctggagctcctaagcaagtgctcaagaaacctatcctccgtacggcgacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacggatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaaccatctgggtggaacacaaactcgtgaacatcctggatgctgttgagttggtggatgagcaaggggtcaacctagagctcactttaatcactcttgacaccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgatcaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaagttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagcgagcaaggggagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacggaccaactcgcaccaaactcgaacctagtgtgtttcatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgagtatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagtgccttggggatcaaaaagagggatatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaagggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggcctttggacatctctatgaaactttccatgcaaaccctgggactgtgactggctcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgctttcgactactcgggctatgatgctagtcttagcccagtttggtttagagcattggagctagttcttagagagataggctacggtaacgaggcggtctcactcatcgaggggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaataacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggatgatgtacttgctagttaccctttccccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgacccctgcagacaagtctccttgcttcaatgaagttaattgggaaaatgcaaccttccttaagagaggtttcttgcctgacgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgtaatactcaagatcacgtgcgatccttatgtctattggcgtggcataatggcaaacaagagtatgaaaaatttgtaaatgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgagaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX430797.1_Coxsackievirus_A6_strain_CVA6/Homo_sapiens/VNM/2.1/2014_polyprotein_gene_partial_cds
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccat-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atatcacgctacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgcacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagagaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagaatggccagaatactgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactggcaactaagagttggaagacag------------------aatctactggttggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccctgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagattttgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatatcttggatgctggtgtccctctaagtcaagcactggtttacccccatcaatggatcaatttacgaactaataactgcgcaaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccggcaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccgccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaacaa----------t------accactggcaccgccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgtaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctggttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaacttcaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcacttgc--------------tgacaccacaatatcccgagtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacggggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgacgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccccaagccggatagtaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcaacagcttaccagtggttttatgatggttaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccatgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatctcaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtagtaaaccgacatctcgccactcataatgattgggcaaacctagtatgggaaagtagctcgcgagatcttctggtgtcctccaccactgctcaaggatgtgacaccattgcccggtgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttctctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcatctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaacggacttgtcggattcgcagacgtcagagatcttttgtggctggatgaagaagccatggaacagggtgtgtcagattacatcaaa-ggactcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaagctgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcataggatgtcatggcagcccctgggcgtggatcaaggcaaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggaaaaccaaatctcaaacctggagcagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggttccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagcgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctgtgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagat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>KP144339.1_Coxsackievirus_A6_isolate_V13/Ed/UK/2013_polyprotein_gene_partial_cds
--------------------------------------------------------------------------------------------------------------------------------------------------aaact-gtaacttagaaga------------atatcacactact-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcgatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcactag--------------tcgtgcaattcac-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtccactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagccagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggttatagtgaccgagtcgcgcagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatactgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctaccggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagattttgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcaaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaactttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgatgggacatccccgccaatactgcctggttttgaaccaactccgttgattcacattcctggtgagttcacctctttgttggatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgggcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgtaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctggttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaatttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgatccc--------atcacaaatgcagtgg---aaagcgctgtgagcgcacttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctccaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtagaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgtaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtctaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggacagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccaccccctcaagtatctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggcgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaagacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatctcaagcttatatggtcaaaaactacccgacatatagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtctggggccatctatgtaggtagcttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgacaccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttagatgccaacatggcgtgattggtatcgtgtccactggtggtaacggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtatctagggaggtggaagcccttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgattagaagtgattacgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggattaaggctaagacagcgtccgtcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatctccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggaaaaccaaatctcaaacctggagcagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccagaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggtaaggatatgtcactcttttgccagatggtatcaactgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgactctgatgctattcgccgcagattctacatggactgcgacattgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagcccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggagacgccagcaccagatgttattagtgaccttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatctatcgccacgatcgttgcagtagtctcactggtgtatgttatttacaaactttttgctggatttcagggtgcgtattctggcgcccctaagcaagtgctcaagaaacctatccttcgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccgggaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatatggtttcttgaatctcagtggaaaacccacccaccgcaccatgatgtataacttccctactaaggcaggacagtgtggaggagtagtgacatcagttggaaaagttattggaattcacataggaggcaatggtaggcaaggtttctgtgcggggcttaagaggagctactttgctagcgagcaaggggagatccaatgggtaaagtctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtgttccatgacatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatattaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgttacggcacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacatcttagaccccaccaccagggatgtgagtaagatgaagttttacatggataagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagtagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcagctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtgacgaggcagtctcactcattgaaggaatcaatcatacacaccatgtatatcgcaacagaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgactcctgcagataagtctccttgcttcaatgaggttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggacgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacgg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LC126151.1_Coxsackievirus_A6_genomic_RNA_complete_genome_strain:_Hyogo4667
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gcaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtacagtccat-actctaaagcacattttgattctgaataatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggactcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagttcacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatactgtccttccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacgctgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggagccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatgggcaagggttgtacccagattttgctcatactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggacgctggaatccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttaaaatattgcaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcagagtttagcggccttcgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccgccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accaccggcaccaccggg------gtcagtagattactaatccccgttcgagcgcagaaca------atgtggaccagttgtgtgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagttaccttagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccagaccaacttcgtagtgccaccagataccccgactgaggctaacattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgatccc--------attgcaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatgtcccgggtg--------------------------------accgcagccaacactgcagttagcacccactccctgggcacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagctctaatgctagcgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatggatacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaaccttaatgatagtacgacgcccgggatgctgctgcagtatatgtacgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccccaacaacatgatgggccattttgccatccgaacagtcagtgaatctaccaccggaaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagacccctccgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcttaac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcatgatgattgggcaaatttagtatgggaaagtagctcacgagaccttctggtgtcctccactactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattatcctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatctcttgtggctggatgaagaagccatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaaaaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttgattaaattgatctcagcactagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttagcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatccatcttaggtatccctatcgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacttggagcagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccagaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatctaaatttgtcattgcatccaccaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctatatggactgcgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaacaacacagcaaacttcaaacgctgcagtccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggagtacaataacaggtctgctattggaaacacaattgaagcgttgttccagggcccacccaagtttagacctattaggatt---agtcttgaggagatgccagcaccagatgttattagtgatcttcttgccagtgtcgatagtgaggaggtgcgccaatactgt-agagaccagggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctaccctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaaattcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaagcccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagtctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtattccatgatatctttgagggcaacaaggaaccagcggtcttacatagcaaagaccctcgccttgaggtagattttgagcaggcactgttctctaagtatgtaggaaacacactacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctagatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggataagtttggtcttgacctcccttactctacctatgttaaggatgaactacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaacttttcatgcaaaccctgggactgtgactggttcggctgtgggatgcaacccagacgtgttctggagcaagttgccaatcttgctccctggttccctctttgcttttgactactcgggctatgatgctagcctcagcccagtttggtttagagcactggagctagttcttagagagataggctacagtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcctattgactgctcagaactagcaagaacgggcaaggagtatggtttgaccatgacccctgcagataagtccccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccgatgaaggagattcacgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcggtccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtgagtgcaattaggtctgtccccataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggttgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ946055.1_Human_coxsackievirus_A6_isolate_TW/409/10_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagtccat-actctaaagcacattttgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacattaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatactgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaagggttgtacccagattttgctcatactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggacgctggaatccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccgccaatactacccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggttctttcatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagtcaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaacattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagcgtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgatagcacgacacccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaacagtcagtgaatctaccaccggaaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcataatgattgggcaaatttagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagccatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttgattaaattgatctcagcactagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggtatccctatcgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacctggagcagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatctaaatttgttattgcatccaccaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagtccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgctattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggggccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgcacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagtctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtattccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtaggaaacactttacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgttacggtacagacaatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcttgctccctggttccctctttgcttttgactactcgggctatgatgctagcctcagcccagtttggtttagagcactggagttagttcttagagagataggctacagtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtgagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggttgaat-------------------------acat---------------ctcaaccc-caccagga----atctggt------c-c-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ946053.1_Human_coxsackievirus_A6_isolate_TW/391/10_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctacggaacctttgtgcgcct-g-ttttaca-----acccc-------tccc-c---g-aactc-gcaacttagaaga------------atagcacgctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggactgagtatcgatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaagcc-tagtaacaccattgaaactgcagagtgtttcgctcagca--cta-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgcg-aagagcctattgagctagttagtggtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagtccat-actctaaagcacattttgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccatcactacccaagaggcagccaacattgtattgagctacggagagtggccagaatactgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaatttcactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaagggttgtacccagattttgctcatactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggacgctggaatccctctaagtcaagctctggttttcccccaccaatggatcaacctacgaacaaacaactgtgcaaccattattatgccatatgttaacgcgcttccatttgactcagcgcttaaccactcaaattttggattagttgtgatccctattagtcctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccgccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagatcctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggacgcacatagtgtgggattttggtttgcaatcatcagtcactctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaacattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgatagcacgacgcccgggatgctgttgcagtatatgtatgtgccaccaggggcccctaaaccggatagtaggaagtcataccaatggcagaccgccaccaacccgtcggtatttgcaaaattgagtgatccacccccacaggtgtctgtcccattcatgtctccagcaacagcttatcagtggttctatgatggttaccctacatttggtgagcacaaacaagccgctaatttacaatatgggcagtgtcctaacaacatgatgggtcattttgccatccgaacagtcagtgagtctactactgggaagaacgtccatgttcgggtgtatatgagaattaaacatgtgagagcttgggtgcctaggcccctccgatctcaagcttacatggtcaagaattatccaacatacagccaaac----aataactaatactgcaactgaccgtgcaagcataac---taccacagactatgaaggtggggtaccagcaagcccacaaaggacatctggt------------------------------------------aagtttggccaacagtccggggctgtctatgtaggtaactttagagtggtaaaccgacatctcgccactcataatgattgggcaaatttagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttctctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcaccttatacttgcgaagggacattctgaacccggggactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagccatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttggttaaattgatctcagcactagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggtatccctatcgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacctggagcagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataatcgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatctaaatttgttattgcatccaccaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagtccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgctattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggtgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgcacggcaatagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagtctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtattccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtaggaaacactctacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctagatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatcttgaggctatcgaccttcacactagtgcaggctacccctacagcgccttggggattaagaagagggacatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcttgctccctggttccctctttgcttttgactactcgggctatgatgctagcctcagcccagtttggtttagagcactggagttagttcttagagagataggctacagtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtgagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggttgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ946054.1_Human_coxsackievirus_A6_isolate_TW/399/10_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctacggaacctttgtgcgcct-g-ttttaca-----acccc-------tccc-c---g-aactc-gcaacttagaaga------------acagcacgctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggactgagtatcgatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaagcc-tagtaacaccattgaaactgcagagtgtttcgctcagca--cta-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgcg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaattgag-------agattgttgccatatagctattggattggccatccag--tgactaacagagctttgata-----tacctg----tttgtg-ggttttgttccac-----tcaccaa--------------ttgtacagttcaa-actttgaagtacattttaattctgaataatagaaa-------atgggcgcccaagtctcaacacaaaaatctggatcgcacgagacaaggaatgtagcaactg-aagggtccaccattaacttcaccaatatcaattactacaaggattcttacgcagcgtcggctagtagacaggactttgcacaagatcctgcaaagtttacacgtcctgtcttggataccatcagggaagttgccgctccgttacaatccccctcagttgaggcgtgcgggtatagtgatcgagtcgcacagttgactgtgggtaactcaaccatcaccacccaagaggcagctaatatagtgttgagctatggagagtggccagaatactgtccttctacggacgctacagctgtggataagcctacccgccctgacgtgtcagtgaacaggttctacacactgtcaactaagagctggaagacgg------------------agtctactggctggtactggaagttccctgatgtgttaaatgatacaggagtttttggccaaaatgcccagtttcactacttgtaccgctcgggtttctgcatgcacgttcaatgtaatgcaagcaaattccatcagggggccctcttagtagccgcaatccccgaatttgtgattgctgcaagcagccctgctacgaagcctaatggacaaggattgtacccagattttgcccatactaacccaggtaaggatggccaagagtttcgagatccttatgtcttggacgctggaatccccctaagtcaagctctggttttcccccaccaatggatcaacctacgaacaaacaactgtgcaaccattattatgccatatgttaacgcgcttccatttgactcagcgcttaaccactcaaattttggattagttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccgccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagatcctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcgatgcttgggacgcacatagtgtgggattttggtttgcaatcatcagtcaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaacattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcaaagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactacagctagcacccactccctgggaacaggacgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----tctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgatagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaacagtcagtgaatctaccaccggaaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aagtttggccaacagtccggggctatttatgtaggtaactttagagtggtaaaccgacatctcgccactcataatgattggacaaatttagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagccatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttgactaaattgatctcagcactagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggtatccctatcgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacctggagcagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatctaaatttgttattgcatccaccaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagtccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgctattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggtgccaacaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgacaccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagtctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtattccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtaggaaacactctacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctagatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatcttgaggctatcgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacatcttagaccccaccaccagggatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcttgctccctggttccctctttgcttttgactactcgggctatgatgctagcctcagcccagtttggtttagagcactggagttagttcttagagagataggctacagtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtgagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggttgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LC126150.1_Coxsackievirus_A6_genomic_RNA_complete_genome_strain:_Hyogo4658
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gcaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggaccgagtatcaatagactgc-tggcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggttttgttccac-----tcaccaa--------------tcgtgcagtccat-actctaaagcacattttgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgaaacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaggactcttatgcagcgtcagctagtagacaagattttgcacaagatcctgcaaagttcacacgtcctgttttggataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcgaccattactacccaagaggcagccaacattgtgttgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaagggttgtacccagattttgctcatactaacccaggtaaaaatggtcaagagtttcgagatccttatgtcttggacgctggaatccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcaaccatcattatgccatatgtcaacgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctactacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggttccctacagagctcaagcctgggaccaatcaatttcttacaaccgatgacgggacatccccgccaatactgcctggttttgaaccaaccccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accaccggcaccaccggg------gtcagtagactactaatccctgttcgagcgcagaaca------atgtggaccagttgtgtgcatcattccaagtggatcctgggcgtaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggctcccttaaggtaacctttatgttcacaggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagttaccttggttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccagaccaacttcgtagtgccaccagatacccccactgaggctaacattatagctcttggagcagcacagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgatccc--------attgcaaatgcagtgg---aaagtgctgtgagcgcgcttgc--------------tgataccacaatatcccgggtg--------------------------------accgcagccagtactgcagttagcacccactccctgggcacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaatggggtcaatgaggcgagtgtggaacatttttactctcgcgcagggctagtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagacgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagtttacttttgtgtccaacctcaatgatagcacgacgcccgggatgttgctgcagtatatgtatgtgccaccaggggcccctaaaccggatagcagaaaatcataccaatggcagactgctactaacccgtcgatattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaagcaagccaccaatttgcaatatgggcagtgtcctaacaacatgatgggccattttgccatccgaacagttagtgaatctaccaccggaaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggccatctatgtgggtaattttagagtggtaaaccgacatctcgccactcataatgattgggcaaatttagtatgggaaagtagctcacgagaccttctggtgtcctccactactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtactatcctgccaggtatcaatcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggtattcttaggtgccaacatggcgtgattggtattgtgtccactggtggtgatggacttgtcggatttgcagatgtcagagatcttttgtggttggatgaagaagccatggaacagggtgtgtcagattacatcaaa-gggcttggtgacgcattcggaactggttttacggatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggctgttgagaagatcttgaagaatttgattaaattgatttcagcactagtcatagtgatcagaagcgattatgacatggtaaccctcacagcaaccttagcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatctccaataagattagtaaatttattgattggcttaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagacctcgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctctggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaacaggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctgtgccagaatcctgatggcaaggatatgtcactcttttgccagatggtatctactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatccaaatttgtcattgcatccaccaatgctagtaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctgggagagctgccaaattatgctctgaaaacaacacagcaaacttcaaacgctgcagtccactagtgtgtgggaaggccatccaattaagagataggaagtccaaggttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgctattggaaacacaattgaagcgttgtttcagggaccacccaagtttagacctattaggatt---agtcttgaggagatgccagcaccagatgtcattagtgatcttcttgccagtgtggatagtgaggaggtgcgccaatattgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaatcatgcaatccatcgccacgatcgttgcagtagtctcgctggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgcacggcaacggtgcagggacctagccttgattttgccttatccctgctgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcatcagggatcgcttagcagttctcccgcgccattcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttagtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaaattcattccagaaaacatcagtgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgttggtgatgtcgtgcaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtattctatgacatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtaggaaacacactacatgagcctgatgaatatatcaaggaggcagccctacattatgcaaatcagttgaagcagctagatatagatacctctcaaatgagcatggaagaggcttgctacggtacagacaatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacatcttagaccccaccaccagggatgtgagcaagatgaagttctacatggataagtatggtcttgacctcccttattctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaatcgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttttggagcaagttgccaatcttgctccctggttccctctttgctttcgactactcgggctatgatgctagccttagtccagtttggtttagagcactggagttagttcttagagagataggctacagtaacgaggcagtctcactcattgaagggatcaaccacacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattacttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggtaaggagtatggtttgactatgacccctgcagataagtctccttgcttcaacgaagttaattggaaaaatgcaacctttctcaagagaggtttcttgcctgatgaacaatttccatttttgattcaccccaccatgccgatgaaggagattcatgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcggtccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtgaatgcaattaggtctgtcccaataggaaaggcactggctatcccaaattatgaaaacctaagacgcaattggctcgaattattct-----agaggttgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM114057.1_Coxsackievirus_A6_strain_Finland/2008_complete_genome
----------------------------------gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---aaaaatt-gcaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcagagtgtttcgctcagca--ctt-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggttttgttccac-----tcaccaa--------------tcgtatagtccat-actctgaagcacattttgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggactcttatgcagcgtcagctagtagacaggattttgcacaagatcctgcaaagttcacacgtcctgtcttagataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaaattccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaagggttgtacccagattttgctcatactaacccaggtaaaaatggtcaagagtttcgagatccttatgtcttggacgctggaatccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaaccaataactgcgcaaccattatcatgccatatgtcaacgcacttccatttgattcagcacttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtaccaattacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggttccctacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccgccgatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accaccggcaccaccggg------gtcagtagattactaatccctgttcgagcgcagaaca------atgtggaccagttgtgtgcatcattccaagtggatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacttttatgttcacaggttcttttatggctacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagttaccttagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccagaccaactttgtagtgccaccagatacccccactgaggcaaacattatagctcttggagcagcacagaagaactttaccctaaagttgtgcaaggacactgacgaaatccaacaaacagcaaagtaccaaaatgatccc--------attgcaaatgcagtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccagcactgcagttagcacccactccctgggtacagggcgtgtaccagcattacaagctgcagaaacgggagcaagttctaatgctagtgatgagaacctcattgagacccgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggaacacttctactctcgtgcagggctggtaggggttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagacgtgatgggttttgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgacgccgagttcacttttgtatccaacctcagtgatagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagccactaatttgcaatatgggcagtgtcctaacaacatgatgggccactttgccatccgaacagtcagtgaatctaccaccggaaaaaacgtccacgttcgggtgtatatgagaattaagcacgtaagagcttgggtacctaggccccttcggtcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggc------------------------------------------aagtttggccaacagtccggggctatctatgtgggtaactttagagtcgtaaaccgacatctcgccactcataatgattgggcaaatttagtatgggaaagtagctcacgagaccttctggtgtcctccactactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggggtgtattactgtaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattatcctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggttggatgaagaagccatggaacagggtgtgtctgattacatcaaa-gggctcggcgacgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttgattaaattgatctcagcactagtcatagtgatcagaagcgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatccatcttaggtatccctatcgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggatcaaggaaaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatactctggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatttatgccagaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatctaaatttgtcattgcatctaccaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcgtataaaacagatctgggtaggttagatgctggaagagctgccaaattatgctctgaaaacaacacagcaaacttcaaacgctgcagcccactagtatgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggagtataataacaggtctgctattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattagaatt---agtcttgaggagaagccagcaccagacgttattagtgatcttcttgccagcgtggatagtgaggaggtgcgccaatactgt-agagaccaaggttggatcataccagaaatccctaccaacgttgagcgacatctaagtagggctgtactaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacggtgcagggacctagccttgattttgctctatccctgctgagaaggaacatcaggcaggttcagacagatcaagggcacttcaccatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacgatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttagtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaaattcattccagaaaacatcagtgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgcttgtacctgtgggcgatgttgtgcaatatggtttcttgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtagtgacttcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaatgggccaactcgcaccaaactcgaacctagtgtattccatgacatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtgggaaacacactacatgagcccgatgaatatatcaaggaggcagccctacattatgcaaatcagttgaagcagctagatatagatacctctcaaatgagcatggaagaggcttgctacggtacagaaaatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacatcttagaccccaccaccagggatgtgagcaagatgaagttctacatggataagtatggtcttgatctcccttactctacttatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttagttgaagctagcagtttaaatgactcagtttacctcagaatggcctttggacatctctatgaagctttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttttggagcaagttgccaatcttgctccctggttccctctttgctttcgactactcgggctatgatgctagcctcagtccagtttggtttagagcactggagttagttcttagagagataggctacagtgacgaagcagtctcactcattgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattacttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggtaaggagtatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccgtttttgattcatcccaccatgccgatgaaggagattcatgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaagcgagaatatgaaaaatttgtgagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggttgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289380.1_Coxsackievirus_A6_isolate_CV-A6/P362/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaagtctgggtcacacgagacaaagaatgtagcgaccg-aagggtctactatcaactttaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtcttagataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtgttgagctacggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgttttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgcaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcgggcagatctgcaggtattacactcgatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcaccccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttactctaggtataccttggattattaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagctgtgcaaggacactgacgagatccagcacacagcagagtaccaaaatgatccc--------attacaaatgctgtgg---aaagcgctgtgagcgcgcttgc--------------cgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagtgcgtgtaccgccattgcaagccgcagaaacgggagcaatctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatggaccatattgccatcagaacagtcagtgaatctaccaccgggaaaagcgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagatcccttcgatcccaagcttatatggtcaagaagtaccagtcatacagccaagc----aataattaacagggcatccgaccgtgcaagtatatc---caccaaggattatgaaggcggggtgccatcaaacccacaaaggacatatggt------------------------------------------aggataggccaacagtccgggggtatttatgtaggtaacttcagagtggtaaccagacatctcgcccatcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccattgctcaacaatgtgataccaagggtcgatgggattgtcaaccaggagggtattcctgcaactctagaaggaaacattacccggttagtttttataagcctagcctcgtttttgtggaagctagtgagtattaccaggccaggtatcagtcgcacctcatgcttgagaagggacattctgagcccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaacccttacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttagagaaccaaatctcaaatctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaacgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagaacactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaactttaaacgctgcagcccactggtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgc-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacggtcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaagttcagacggatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcatgaacatcctggatgctgttgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgaaaaattcagagacatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgatcaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaagcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaaactcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatattttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggatacggtaacgaggcagtctcactcatcgaagggatcaatcacacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccatcttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagaggggtttcttgcctgatgaacaatttccatttttgattcaccccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KY126089.1_Coxsackievirus_A6_isolate_DY003R/Shandong/China/2015_complete_genome
-----------------------------------------------------aca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----accct---c---cccc-g---a-aactt-gcaacttagaagt------------tatgtacgttact-gatcaa-cagcaggcgtggcacaccagccatgtcttga-tcaagcacttctg-taaccccggactgagtatcaatagactgc-tcacgtggtcgaaagagaaaacgttcgttatccggctaactacttcgagaaact-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttc---tttt---attctcataatggctgcttatggtgacaattgag-------gaattgttgccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtcttagataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggggagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagtaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacgctaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttatgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcctgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatctggtaccaaaccaacttcgtagtgccaccagacacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgtaaggacactgacgagatccagcaaacagcacagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactcccgcgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacacccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaaaccggatagcaggaaatcgtatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcataaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatgctcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcagggatgtgataccattgcccgatgtgattgtcaagcaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaggtggaggctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggcttaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagctaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtctttggcgaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagaccactttgatggttacaaacagcaagtggtcacagttatggatgatctatgccaaaatcctgacggcaaggatatgtcactcttttgccagatggtatccaccgtagat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>KP289381.1_Coxsackievirus_A6_isolate_CV-A6/P366/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-ttagaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgcg-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtaatcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtctgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttgtattggctgctaatggtgacaatagag-------agattgttaccatatatctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgatcctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctggatcgcacgagacaaagaatgtaccgaccg-aagggtctactatcaacttcaccaacatcaagtactataaggattcttatgcactgccaggtagtatacaggactttgcacaagatcccgcaaaggtcacactccctgtcttgaataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggatatatcgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggacagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggacattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggttactgcatgcacgttcagtgcaatgcgagcaagttccatcaggaggccctcttagtggctgcaatccctgaatttgtggttgctgcaagcatccctgccacgaagactaatggacaaggattgtacccagatttcgctcacactaacctaggtaaaaatagaccagagtttcgagatccttatgtcttggatgctggggttcccttaagtcaagcagcggtttacccccatcaatggatcgatatacgaattaataaaggcgcaaccactatcatggcatatgtcaaagcgctcccattagattcagcgcttaaccactcaaattttggattggttgtgatccccagtagccctttaaaatattgtaatggagctaccacagaggtaccaatcacactaactattgccccgcttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccataatagaagtcaataa----------t------accactggcacccccggg------gtcagtagattattaatccccgttcgagcacagagca------atgtggaccagttgtgcgcgtcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagagaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagacacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagtacccactccctggggacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacatttttactctcgtgcagggttggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacaacggcgcaagctggagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaagcaagctaccaatttgcaatacgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaagacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagggtggtaaaccgacacctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcagggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttcaaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgctcgcgaagggacattctgaacccggggactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggcttggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaggctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatttcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggcttaaggagaaaattgtaccagcagctagagagaaggtcgagtttttggacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtacctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctctggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagaccattttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgacggcaaggacatgtcactcttttgccagatggtgtccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaactttaaacgctgcagcccactagtgtgtgggaaggccatccaattaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctatcaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcaaggtgcgtattctggtgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacggatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtagatgagcaaggggtcaacctggagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaacccgcaccaagctcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagtaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctaaatatagacacttctcaaatgagcatggaagaggcttgctacggtacagacaatctcgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatatcttagaccccaccaccagggacgtgagtaagatgaagttctacatggacaagtatggtcttgatctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacggtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcgatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacttggatgaacttaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgcgcagaactggcaagaacgggcagggagtatggtttaaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccaatgaaggagattcacgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggtaaacaagaatatgaaaaatttgtaagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taaccaa-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KY126092.1_Coxsackievirus_A6_isolate_WH15066/Shandong/China/2015_complete_genome
-------------------taaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaagg------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactactttgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-tccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctaccatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagttgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagttacggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgtcctgacgtgtcagtgaataggttctacacactgtcaaccaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtatttggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcctagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatatcttggatgctggtgtccccttaagtcaagcactggtttacccccatcaatggatcaatttacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccccattagccctttaaaatactgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggaatttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttctcacaactgatgacggaacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatattagaagtcaataa----------t------accactagcaccactgga------gtcagtagattactaatccccgttcgagcacagaaca------acgtggaccagttgtgcgcatcattccaagtggaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggctacaggaaaaatgctgatagcctacacaccacctggtagcgctcagcccgctacgagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtttacgactactacgcaaccgggattgtcaccatttggtaccaaaccaactttgtagtgccaccagacacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcggtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggta--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagacccgctgtgtgatgaatcgaaacggggttaatgaggcgagcgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtctggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctatcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacaacacccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcgatattcgcaaagttgagtgatccacccccccaggtatctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaagacgtccgcgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcagctgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aagtttggtcaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctagtgtcctccaccactgctcagggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctaaaaggaaacactacccggttagtttctctaagcccagcctcgtcttcgtggaagcaagtgagtattaccctgccaggtatcaatcacacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggcaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcatttggaactggctttactgatgcagtgtctagggaggtggaggctcttaagaactaccttatagggtctgaaggggctgttgaaaagatcttgaagaatttgattaaactgatctcagcattagtcatagtgatcagaagtgattacgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaagacagcatccatcttgggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagatcagtaaatttattgattggcttaaggagaaaattataccagcagctagagagaaggtcgaatttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaggaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactctatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagacccagaccactttgacggttacaaacagcaagtggtcacagttatggatgacctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttctttggaagagaaaggggtttcattcacatccaaatttgttattgcatccactaatgctagtaacatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacggatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcgaacttcaaacgctgcagcccactagtgtgtgggaaggccatccaattaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgctattggaaacacaattgaagcgttgttccaggggccactcaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaactcctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacggtcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtactcaagaaacctatccttcgtacggcaacagtgcaaggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaagacaatctgggtggagcacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaagtatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggggatgtcgtacaatacggtttcctgaatctcagtggaaagcccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggtaattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgccagtgagcaaggagagatccagtgggtaaagcctaacaaagaaactgggagactcaacatcaacgggccaactcgcaccaagctcgaacctagtgtgttccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctccaagtatgtaggaaacactatacatgagcctgatgaatatatcaaggaagcagccttacattatgcaaatcagttgaagcagctaaatatagatacttctcaaatgagtatggaagaggcttgttacggcacagataaccttgaagctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggatattttagaccccaccaccagggatgtgagtaagatgaagttctacatggacaagtatggtcttgacctcccttactctacttatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgcaatccagatgtgttctggagcaaattgccaatcctgctccctggttccctctttgcttttgactactcgggctatgatgctagtctcagcccagtttggtttagagcattggagctagttcttagagagataggctacagtaacgaggcagtctcactcatcgaggggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccatcaggctgttcaggaacatccattttcaactcaatgattaacaacatcattattagatcattgcttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgcgcagaactagcaaggacaggcaaggagtacggtttaaccatgacccccgctgataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgacgaacaatttccatttttgattcaccccaccatgccaatgaaagagattcacgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaattcgtaagtgcaattaggtctgtcccagtaggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggtcggat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----cgaatat-g-actg--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KR815992.1_Coxsackievirus_A6_isolate_12743/GZ/CHN/2013_complete_genome
----------------------------------gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---t-cc-c---a-aaact-gtaacttagaaga------------atagcaccctatc-gatcaa-tagcaggcatggtgcaccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtacagtccaa-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaggactcttatgcagcatcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcggccccgttgcaatccccttctgttgaggcgtgcggctatagtgatcgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcggtgaatagattctacacactgtcaaccaagagttggaagacag------------------aatctactggttggtactggaaattccctgatgtactaaatgatacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtagttgctgcaagcagtcctgctacgaagcctaatggacaaggattgtacccagattttgctcatactaacccaggtaaaaacggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatttacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttaaaatattgcaatggagctaccacagaagtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggactaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgtcagatagaaaccatactagaagtcaataa----------t------accaccggcactaccggg------gtcagtagattactaatccccgttcgagcgcagaaca------atgtggaccagttgtgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggctctttcatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcagtcatcagtcaccttagttataccttggattagcaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagacacccccactgaggctaacatcatagctcttggagcggcacagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagttagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcggaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcagtgatagcacaacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaactgtcagtgaatctaccaccgggaaaaacatccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcataatgattgggcaaatttagtgtgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgataccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccagatatcagtcgcacctcatgcttgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtggtggactcgtcggatttgcagatgtcagagaccttttgtggttggatgaagaagccatggaacaaggtgtatcagattatatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagcccttaagaactaccttataggatctgaaggggccgttgaaaagatcttgaagaatttgattaaactgatctcggcactagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttagcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatctatcttaggtatccctattgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataaaattagtaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaagttgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtacctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccgggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtattcacttccgccagatccagatcactttgatggttacaagcagcaagtggtcacagttatggacgatttatgccagaatcctgatggcaaggatatgtcactcttttgccagatggtgtctactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatccaaatttgtcattgcatccaccaatgccagcaatattatagtgccaacagtgtctgactctgatgctattcgccgcaggttctacatggattgcgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaactatgctctgaaaacaatacagcaaacttcaaacgctgcagtccactagtgtgtgggaaggctatccaactaagagacaggaagtccaaagtcagatatagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgctatcggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattagaatt---agtcttgaggagatgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaggaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaattgtgcaatccgtcgccacgatcgttgcagtagtctcactggtttatgttatctacaaactttttgctggatttcagggtgcgtactctggcgctcctaagcaagtgctcaagaaacctattctccgtacggcaacggtgcagggacctagccttgattttgccctatccctgctgagaagaaacatcaggcaagttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttggcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacataaactcgtgaacatcctggatgctgtcgagttagtggatgagcaaggggtcaacctggagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaaatttattccagaaaacatcagcgccgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggcttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaatttccctactaaggcaggacagtgtgggggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagagaagctactttgctagtgagcaaggagagatccaatgggtaaagtctaacaaagaaactgggagacttaacatcaatgggccaactcgcaccaaactcgaacctagtgtattccatgacatctttgaaggcaacaaggaaccagcggtcttacacagcaaagatcctcgcctcgaggtagattttgaacaggcattgttctctaagtatgtaggaaatacactacatgagcctgatgaatatatcaaggaggcagcactacattatgcaaatcagctgaagcagctaaatatagatacctctcaaatgagcatggaagaggcttgctacggtacagacaatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacatcttagaccccaccaccagggatgtgagcaagatgaagttttacatggataagtatggtctcgacctcccttactctacctatgtaaaggatgagctacgctcaatagataaggtcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgagactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagatgtgttctggagcaagttgccaatcttgctccctggttccctctttgcttttgactactcgggctatgatgctagcctcagcccagtttggtttagagcactggagttggttcttagagagataggctacagtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttacggggacgatgtacttgctagttacccttttcccattgactgctccgaactagcaagaacgggcaaggagtatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaattcccatttttgattcatcccaccatgccgatgaaggagatccacgaatccattcggtggactaaggacgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtgaatgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacttgagacgcaattggctcgaattattct-----agaggttgaac-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taccc-a-g-aatagctgaacatctagaacgttgactcacaataagtggtggttcactgaccactttttaagatccctgcctcttctgcactttttgttataaccag----aa--------------------tagcatactcgatttttcggccgttttttgccgttttgttcagtatgcttctcacagcttgccgccgcaaggagcatgagcgcatcttcaagttggtgacccacacg
>KJ541159.1_Coxsackievirus_A6_isolate_4592/SH/CHN/2012_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaatagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtacagtccat-actctaaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaggactcttatgcagcatcagctagtagacaggattttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggctatagtgaccgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcggtgaataggttctacacactgtcaaccaagagctggaagacag------------------aatctactggttggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcaggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggagccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaaggattgtacccagattttgctcatactaatccaggtaaaaatggtcaagagttccgagatccttatgtcttggacgctggggtccccctaagtcaagcactagtttacccccatcaatggatcaatttacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttaaaatattgtaatggagctaccacagaagtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggactaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgtcaaatagaaaccatactagaagtcaataa----------t------accaccggcaccaccggg------gtcaatagattactaatccccgttcgagcgcagaaca------atgtggaccagttgtgtgcatcattccaagtagatcctgggcgcaatggtccgtggcaatccacaatggttgggcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggctctttcatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggcttgcagtcatcagtcaccttagttataccttggattagcaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagacactcccactgaggctagcattatagcccttggagcggcacagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attacaaatgcagtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagttagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaagactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcactttcgtgtccaacctcagtgatagcacaacacccgggatgctgctgcagtatatgtatataccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctaccaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcgccagcaacagcttatcagtggttctatgatggttaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaactgtcagtgaatctaccaccgggaaaaacatccacgttcggatgtacatgagaattaagcacgtgagagcttgggtgcctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacagattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcataatgattgggcaaatttagtatgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgtgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattatcctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacctggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtggtggacttgtcggatttgcggatgtcagagaccttttgtggctggatgaagaagccatggaacaaggtgtgtcagattatatcaaa-gggctcggtgatgcatttggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactacctaataggatctgaaggggcagttgaaaagattttgaagaatttgattaaattgatctcggcactagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttagcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatccatcttaggtatccctattgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataaaattagtaagtttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgcaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccgggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtattcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccagaatcctgatggcaaggatatgtcactcttttgccagatggtatctactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatccaaatttgtcattgcatccaccaatgccagcaatatcatagtgccaacagtgtctgactctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaacaatacagcaaacttcaaacgttgcagtccactagtgtgtgggaaggccatccaactaagagacaggaagtccaaagtcagatatagtgtggatacggtggtttcagagctcgtaagggagtacaataacaggtctgctatcggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattagaatt---agtctcgaggagatgccagcaccagatgctattagtgatcttcttgccagtgtggatagtgaggaggtgcgccaatactgt-agagaccaaggctggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaattatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtactctggcgctcctaagcaagtgctcaagaaacctattctccgtacggcaacggtgcagggacctagccttgattttgccctatccctgctgagaagaaacatcaggcaagttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttggcagttctcccgcgccactcacagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttagtggatgagcaaggggtcaacctggagcttactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgccgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaatttccctactaaggcaggacagtgtgggggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtgaagtctaacagagaaactgggagacttaacgtcaatgggccaactcgcaccaaactcgaacctagtgtattccatgatatctttgaaggcaacaaggaaccagcggtcttacacagcaaagatcctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtaggaaacacactacatgagccagatgaatatatcaaggaggcagccctacattatgcaaatcagctgaagcagctaaatatagatacctctcagatgagcatggaagaggcttgctatggtacagataatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacatcttagaccccaccaccagggatgtgagcaagatgaagttctacatggataagtatggtctcgacctcccttactctacctatgttaaggatgagctacgctcaatagataaggtcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggcctttggacatctctatgaaactttccatgcaaatcctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcttgctccctggttccctctttgcttttgactactcgggctatgatgctagcctcagcccagtttggtttagagcactggagttagttcttagagagataggctacagtaacgaggcagtctcactcatcgaagggatcaaccatacacaccatgtatatcgcaacaaaacttattgcgtactcggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttacggggacgatgtacttgctagttacccttttcccattgactgctccgaactagcaagaacgggcaaggagtatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggcttcttgcctgatgaacaattcccgtttttgattcatcccaccatgccgatgaaggagattcacgaatccattcggtggactaaggacgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtgagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggcttgaattattct-----agaggttgaac-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaacat-g-actg--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ541166.1_Coxsackievirus_A6_isolate_1827/SH/CHN/2011_complete_genome
--------------------------------------------------------------------gggcg-cagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---c---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggtgcgccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtaacaccattgaagccgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgcg-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggttttgttccac-----tcaccaa--------------tcgtacagtccat-actctaaagtacattttgattctgaacaatagaaa-------atgggcgcccaagtatcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgactg-aggggtctactatcaacttcaccaacatcaattactataaggactcttatgcagcatcagctagtagacaggattttgcacaagatcctgcaaagttcacgcgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggctatagtgaccgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtgttgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcggtgaataggttctacacactgtcaaccaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgtatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaattcccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaaggattgtacccagattttgctcatactaacccaggtaaaaatggtcaagagttccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttaaaatattgtaatggagctaccacagaagtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggactaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgtcaaatagaaaccatactagaagtcaacaa----------t------accaccggcaccaccggg------gtcagtagattactaatccctgttcgagcgcagaaca------atgtggaccagttgtgtgcatcattccaagtagatcctgggcgcaatggtccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggctcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcagtcatcagtcaccttagttataccttggattagcaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagacacccccactgaggctaacattatagctcttggagcggcacagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagttagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggagttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttaatgccgagttcacttttgtgtccaacctcagtgatagcacaacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccccacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaataacatgatgggccattttgccatccgaactgtcagtgaatctactaccgggaaaaacatccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcataatgattgggcaaatttagtatgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttctctaagcctagcctcgtcttcgtggaagctagtgagtattatcctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtgatggacttgtcggatttgcagatgtcagagaccttttgtggctggatgaagaagccatggaacaaggtgtgtcagattatatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttgattaaattgatctcggcactagtcatagtgatcagaagtgattatgatatggtaaccctcacagcaaccttagcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatccatcttaggtatccctattgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataaaattagtaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacatggaacagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtacctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccgggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtattcacttccaccagatccagatcactttgatggttacaagcagcaagtggtcacagttatggacgatctatgccagaatcctgatggcaaggatatgtcactcttttgccagatggtatctactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatccaaatttgtcattgcatccaccaatgccagcaatatcatagtaccaacagtgtctgactctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaacaatacagcaaacttcaaacgctgcagtccactagtgtgtgggaaggccatccaactaagagacaggaagtccaaagtcagatatagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgctatcggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattagaatt---agtcttgaggagatgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaggaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaattatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtactctggcgctcctaagcaagtgctcaagaaacctattctccgtacggcaacggtgcagggacctagccttgattttgccctatccctgctaagaagaaacatcaggcaagttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttggcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacataaactcgtgaacatcctggatgctgtcgagttagtggatgagcaaggggtcaacctggagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaaattcattccagaaaacatcagcgccgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaatttccctactaaggcaggacagtgtgggggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagtctaacaaagaaactgggagacttaacatcaatgggccaactcgcaccaaactcgaacctagtgtattccatgacatctttgaaggcaacaaggaaccagcggtcttacacagcaaagatcctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtaggaaacacactacatgagcctgatgaatatatcaaggaggcagccctacattatgcaaatcagctgaagcagctaaatatagatacctctcaaatgagcatggaagaggcttgctacggtacagacaatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacatcttagaccccaccaccagggatgtgagcaagatgaagttctacatggataagtatggtctcgacctcccttactctacctatgttaaggatgagctacgctcaatagataaggtcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcttgctccctggttccctctttgcttttgactactcgggctatgatgctagcctcagcccagtttggtttagagcactggagttagttcttagagagataggctacagtaacgaggcagtctcactcatcgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccattttcaattcaatgattaacaacatcatcattagatcattgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttacggggacgatgtacttgctagttacccttttcccattgactgctccgaactagcaagaacaggcaaggagtatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggcttcttgcctgatgaacaattcccatttttgattcatcccaccatgcctatgaaggagattcacgaatccattcggtggactaaggacgcacgcaacactcaagatcacgtgcgatctttgtgtctattggcgtggcacaacggcaaacaagaatatgaaaaatttgtgagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggttgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----cgaacat-g-actg--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ541168.1_Coxsackievirus_A6_isolate_3913/SH/CHN/2011_complete_genome
--------------------------------------------------------------------gggcg-cagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---t-cc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggtgcgccaatcatgtctaga-tcaagcacttctg-tctccccggaccgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttatccggctaactacttcgagaaact-tagtagcaccattgaagccgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtaatcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatactggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggtttcgttcctc-----tcaccaa--------------tcgtacaatccat-actctaaagcacattttgattctgaacaatagaaa-------atgggcgcccaagtctcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaggactcttatgcagcatcagctagtagacaggattttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggctatagtgaccgagtcgcacagttgactgtgggcaattcaaccattactacccaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaaacctactcgccctgacgtgtcagtgaataggttctacacactgtcaaccaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactaaatgacactggagttttcggtcaaaacgcccaattccactacttgtatcgctcgggtttctgcatgcacgttcagtgcaatgcaagcaaattccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaagggttgtacccagattttgctcatactaacccgggtaaaaatggtcaagagtttcgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccctttaaaatattgtaatggagctaccacagaagtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggactaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagacttgtgtcaaatagaaaccatactagaagtcaataa----------t------accaccggcaccaccggg------gtcagcagattattaatccccgttcgagcgcagaata------atgtggaccagttgtgtgcatcatttcaagtagatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggctcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcagtcatcagtcactttagttataccttggattagcaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcactgtttggtaccagaccaacttcgtagtgccaccagacacccccactgaggctaacattatagctcttggagcggcacagaagaactttaccctaaagttgtgtaaggacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaacgcagtgg---aaagtgctgtgagcgcgcttgc--------------tgacactacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggcacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagttctaatgctagtgatgagaacctcattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggtactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgtaaactagagctgtcaacatacatgcgctttgatgccgagttcactttcgtgtccaacctcaatgatagcacaacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccccacatttggtgagcacaaacaagctactaatttgcaatatgggcagtgccctaacaacatgatgggccactttgccatccgaactgtcagtgaatctaccaccggaaaaaacgtccacgttagggtgtacatgagaatcaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagttcggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcataatgattgggcaaatttagtatgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattattgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattatcctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgagcccggtgactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtgatggacttgtcggatttgcagatgtcagagaccttttgtggctggatgaagaagccatggaacaaggtgtgtcagattatatcaaa-gggctcggtgatgcttttggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactatcttatagggtctgaaggggctgttgaaaagatcttgaagaatttgatcaaattgatctcagcactagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttagcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatccatcttaggtatccctattgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccagtgctgccaagggatttgagtggatttccaataaaattagtaaatttattgattggctcaaggagaaaattataccagcagccaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaagagagtttatactttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccgggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccagaatcctgatggcaaggatatgtcactcttttgccagatggtatctactgtagattttatcccgccaatggcttctttagaagagaaaggagtttcattcacatctaaatttgtcattgcatccaccaatgccagcaacatcatagtgccaacagtatctgactccgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcgtataaaacagatctgggtaggttagatgctggaagagctgccaaattatgctctgaaaacaatacagcaaacttcaaacgctgcagtccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatatagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgctatcggaaacacaattgaagcgttgtttcaggggccacccaagtttagacctattaggatt---agtcttgaggagatgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaggaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaattatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtactctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacggtgcagggacctagccttgattttgctctatccctgttgagaaggaacatcaggcaggttcagacagatcaaggacactttactatgttgggcgtcagggatcgcttggcagttctcccgcgccactcgcagcctggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttagtggatgagcaaggggtcaacctggagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaaattcattccagaaaacatcagcgcagctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgttgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaatttccctactaaggcaggacagtgtgggggagtagtgacgtcagttggaaaggttattggaattcacataggaggcaatggtagacaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtgaagtctaacaaagagactgggagacttaacatcaatgggccaactcgcaccaaactcgaacctagtgtattccatgatatctttgaaggcaacaaggaaccagcggtcttacacagcaaagatcctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtaggaaacacactacatgagcctgatgaatatatcaaggaggcagccctacattacgcaaatcagttgaagcagctaaatatagatacctctcaaatgagcatggaagaggcttgctacggtacagacaatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaaaagggacatcttagaccccaccaccagggatgtgagcaagatgaagttctacatggataagtatggtctcgacctcccttactctacctatgttaaggatgagctacgctcaatagataaggtcaagaaagggaaatcccgcctaattgaagctagcagtttgaatgactcagtttacctcagaatggcctttggacacctttatgaaactttccatgcaaaccctgggactgtgactggctcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcttgctccctggttccctctttgcttttgactactcgggctatgatgctagcctcagcccagtttggtttagagcactggagttagttcttagagagataggctacagtaacgaggcagtctcactcatcgaagggatcaaccatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccatcttcaattcaatgattaacaacatcatcattagatcactgcttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttacggggacgatgtacttgctagctacccttttcccattgactgctccgaactagcaagaacgggcaaggagtatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaactgggaaaatgcaacctttcttaagagaggcttcttgcctgatgaacaattcccatttttgattcatcccaccatgccgatgaaggagattcacgaatccattcggtggactaaggacgcacgcaacactcaagatcacgtgcgatccttgtgtttattggcgtggcacaacggcaaacaagaatacgaaaaatttgtgagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgtaattggctcgaattattct-----agaggatgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ541169.1_Coxsackievirus_A6_isolate_4368/SH/CHN/2012_complete_genome
--------------------------------------------------------------------gggcgc-agcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---g-aaact-gtaacttagaaga------------aaagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagcgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------aaattgttaccatatagctattggattggccatccag--taacgaacagagctttgata-----tatttg----ttcgtg-ggtttcgttccac-----tcaccaa--------------tcgtgcagtccat-actctaaagcacattttgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggattttgcacaagatcctgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatctccttctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaattcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatactgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaatttcctgatgtgctaaatgacacaggagttttcggtcaaaacgctcaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgagtttgtggttgctgcaagcagccctgctacgaagcctaatggacaagggttgtacccagattttgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggacgctggaatccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcaaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccattcaaattttgggttggttgtaattcctattagccctttaaaatattgtaatggagctaccacagaggtgcctatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcctacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccgccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatattagaagtcaataa----------t------accaccggcaccaccggg------gttagtagattactaatccccgttcgagcgcagaata------atgtggaccagttgtgtgcatcattccaagtagatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatttgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggttcctttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcaacccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagttaccttagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactatgcaaccgggatcgtcactatttggtaccagaccaatttcgtagtgccaccagatacccccactgaggctaacatcatagctcttggagcagcgcagaagaactttaccctaaagttgtgcaaagacactgacgagatccaacaaacagcagagtaccaaaacgatccc--------attacaagtgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagctaacactgcagttagcacccactccctgggaacagggcgtgtaccagcgttgcaagctgcagaaacgggagcaagctctaatgctagcgatgagaaccttattgagacccgctgtgtgatgaatcgaaacggggttaatgaagcgagtgtagaacacttttactctcgtgcaggactggtgggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtatccaacctcaacgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctacaaacccgtcgatattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaggctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaacagttagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattatccgacatacagccaaac----aataactaacactgcaaccgaccgcgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtagtgaaccgacatctcgccactcataatgattgggcaaatttagtatgggaaagtagctcacgagaccttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactccagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtactatcctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggcaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagccatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagagaagtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttaaagaatttgattaaactgatatcagcactagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatctatcttaggtatccccatcgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttctaataagattagcaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacctggaacagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccgctttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaaatccttggcaactggtataattgcccgagcaatagctgacaaataccactctagcgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatctactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatctaaatttgtcattgcatccaccaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgtgacatcgaggtaacggactcgtataaaacagatctgggcaggttagatgctggaagagctgccaaattatgctctgaaaacaacacagcaaacttcagacgctgcagtccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgctattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggagatgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaggaggtgcgccaatactgt-agagaccagggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaatcgtgcaatccattgctacggtcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggtgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagtcctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggagtcaacttagaactcactctaatcactctcgataccaatgagaaattcagagatatcaccaaatttattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtagtgacatcagttggaaaggttattggaatacacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagtcaaacaaagaaactgggagacttaacatcaacggaccaactcgcaccaaacttgaacctagcgtattccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagatcctcgcctcgaggtggattttgagcaggcattgttctctaaatatgtaggaaacacactacatgagcctgacgaatatatcaaggaggcagccttacattatgcaaatcagttaaagcagctagatatagatacttctcaaatgagcatggaagaggcttgctacggtacagacaatcttgaggctattgaccttcacactagtgcaggctacccttacagcgctttgggtatcaagaagagggacatcttagaccccaccaccagggatgtgagcaagatgaagttctacatggataagtatggtcttgacctcccttactctacttatgttaaggatgagctacgctcagtagataagatcaagaaagggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggcctttggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtattctggagcaagttgccaatcttgctccctggttccctctttgcttttgactactcgggctatgatgctagccttagcccagtttggtttagagcactggagttagttcttagagagataggctacagtgacgaggcagtctcactcatcgaaggaatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccattttcaactcgatgattaacaacatcatcattagatcattacttatcaagacattcaagggtattgacctggatgaactcaacatggttgcttacggggacgatgtacttgctagttaccctttccccattgactgctcagaactagcaagaacgggcaaggagtatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccgatgaaggagattcacgaatccattcggtggactaaggatgcacgcagtactcaagatcatgtgcgatccttgtgtctattggcgtggcataacggcaaacaagaatatgaaaaatttgtgagcgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggttgaat-------------------------acac---------------ctcaaccc-caccaggg----atctggt------c-g-----tgaatat-g-actg--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP144350.1_Coxsackievirus_A6_isolate_V1/Ed/UK/2012_polyprotein_gene_partial_cds
--------------------------------------------------------------------------------------------------------------------------------------------------aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagagtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--taacgaacagagctttgata-----tacttg----tttgta-ggtttcgttccac-----tcaccaa--------------ttgtgcagtccat-actctaaagcacattttgactctgaataatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggactcttatgcagcgtcggctagtagacaggattttgcacaagaccccgcaaagttcacacgccctgtcttggacaccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaattcaaccattaccactcaagaggcagccaacattgtattgagctacggggagtggccggagtactgtccttccacggacgctacagctgtggacaaacctacccgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgatacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaagggttgtacccagattttgctcatactaacccaggcaaaaatggccaagagtttcgagatccttatgtcttggacgctggaatccccctaagtcaagcactggtttacccccatcaatggatcaacctgcgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcgaattttggattagttgtaattcctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcagagtttagcggcctccgacaagcaataaaacaagggtttcctacagagctcaagcctgggaccaatcaatttcttacaactgacgatgggacatccccgccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accaccggcaccaccggg------gtcagtagattactaatccccgttcgagcgcagaata------atgtagaccagttgtgtgcatcattccaagtagatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggttcctttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatctgttaccttagttataccttggattagtaacacccattttagagcagttaagactggaggagtatacgactactatgcaaccgggatcgtcactatttggtaccagaccaacttcgtagtgccaccagatacccccactgaggctaacattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggatactgacgagatccaacaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcacttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagttagcacccactccctgggaacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagctctaatgctagtgacgagaacctcattgagacccgctgcgtgatgaatcgaaacggggttaatgaagcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----tctggatgggtacacagtttggcctatagatgtaatgggcttcgtgcaacagcggcgcaaactagagctgtcaacatacatgcgcttcgatgctgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctacagtatatgtatgtaccaccaggggcccctaagccagatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcaatggttttatgatggttaccctacatttggtgagcacaaacaggctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaacagttagtgaatctaccaccgggaaaaacgtccacgtccgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatatagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtgccagcaaacccacaaaggacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggaaactatagagtggtaaaccgacatctcgccactcataatgattgggcaaatttagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactccagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtactatcctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagccatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagagaagtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaaaaatttgattaaattgatctcagcactagtcatagtgatcagaagtgattatgacatggtgaccctcacagcaaccttagcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatccatcttaggtatccctatcgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagcaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacctggaacagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgtcgtaaataccaaccactttatgctacagaagccaaaagagtctatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaaatccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagcgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtagtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatctaaatttgtcattgcatccaccaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgtgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaacaacacagcaaacttcaaacgctgcagtccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgctattggcaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggagctgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaggaggtgcgtcaatactgt-agagaccaaggttggatcataccagaaacccccaccaacgttgagcgacatctaagtagggctgtactaatcgtgcaatccattgctacggtcgttgcagtggtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcggtcctcccgcgccactcgcagcccggaaaaacaatctgggtggagcacaaactcgtgaacatcctggatgctgttgagttggtggatgagcaaggagtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaaattcattccagaaaacatcagcgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgtaccatgatgtataacttccctactaaggcaggacagtgtggaggagtagtgacatcagttggaaaggttatcggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggggagatccaatgggtaaagtctaacaaagaaactgggagacttaacattaacgggccaactcgcaccaaacttgaacctagtgtattccatgatatctttgagggcaacaaggaaccagcggtcttacacagtaaagacccccgccttgaggtggattttgagcaggcattgttctccaaatatgtaggaaacacactacatgagcctgatgaatatatcaaggaggcagccttacattatgcaaatcagttgaagcagctagatatagatacttctcaaatgagcatggaagaggcctgctacggtacagacaatcttgaggctattgaccttcacactagtgcaggttacccctacagcgccttgggtatcaagaagagggacatcttagaccccaccaccagggatgtgagtaagatgaagctctacatggataagtatggtcttgacctcccttactctacttatgttaaggatgagctacgctcagtagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctaagaatggccttcggacatctctatgaaactttccacgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttctggagcaagttgccaatcttgctccccggttccctctttgcatttgactactcgggctatgatgctagccttagcccagtttggtttagagcactggagttagttcttagagagataggctacagtgacgaggcagtctcactcattgaaggaatcaaccatacacaccatgtatatcgcaacaaaacttattgcgtgcttggtgggatgccctcgggctgttcaggaacatccattttcaactcgatgattaacaacatcatcatcagatcattgcttatcaagacattcaagggtatcgacctggatgaactcaacatggttgcttatggggatgatgtacttgctagttacccttttcccattgactgctcagagctagcaagaacgggcaaagagtatggtctgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccgatgaaggagattcacgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcataacgg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LC126153.1_Coxsackievirus_A6_genomic_RNA_complete_genome_strain:_Hyogo5675
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagtaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggccgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgta-ggctttgttccac-----tcacaaa--------------ttgtacagtccgt-actctgaagtacattttgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcacacgagacaaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactacaaagactcttatgcagcgtcagctagtagacaggattttgcacaagatcctgcaaagttcacacgtcctgtcttagataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgtggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgacgtgctaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaaattccatcagggggccctcttagtagctgcaatccccgagttcgtagttgctgcaagcagccctgctacaaaacctaatggacaagggttgtacccagattttgctcatactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggacgctggaatccccctaagtcaagcactggttttcccccatcagtggatcaatctacgaaccaataactgcgcaaccattattatgccatatgtcaacgcgctcccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaaccattgccccacttaactcggagtttagcggccttcgacaagcaataaaacaagggttccctacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccatttattcacattcctggtgaattcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accaccagcaccaccggg------gtcagtagattactaatccctgtacgagcgcagaaca------atgtggaccaattgtgtgcatcattccaggtggatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtactacactcaatggtctggttcccttaaggtaacctttatgttcacaggttcttttatggctacagggaaaatgctgatagcctacacaccacctggtagtgcccagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagttaccttggttataccttggattagtaacactcattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtatcagaccaacttcgtggtgccaccagatacccccactgaggctaacattatagctcttggagcagcacagaagaactttaccctaaagctgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgatccc--------attgcaaatgcagtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatatctcgggtg--------------------------------accgcagccagcactgcagccagcacccactccctgggtacggggcgtgtaccagcattgcaagctgcagaaacgggagcaagttctaatgctagtgatgaaaacctcattgagactcgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggagcacttttactctcgtgcagggctggtaggggttgtggaggtaaaggactcgggcactag----cctggatgggtacacagtttggcccatagacgtgatgggctttgtgcagcagcggcgcaaattagagctgtcaacatatatgcgctttgatgccgagttcacttttgtgtccaacctcaatgatagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaaaccggatagtaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccccacatttggtgagcacaaacaagctattaatttgcaatatgggcagtgtcctaacaacatgatgggccactttgccatccgaacagtcagcgaatctaccaccggaaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctaggcccctccgatcccaagcttatatggtcaagaattacccgacatatagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccactgattatgaaggcggggtaccggcaaacccacaaagaacatctggt------------------------------------------aagcttggccaacaatccggggctatctatgtgggtaactttagagtggtaaaccgacatcttgccactcataatgattgggcaaatttagtatgggaaagtagctcacgagaccttttggtgtcctccactactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactctagaaggaaacattacccggttagtttttccaagcctagcctcgtctttgtggaagctagtgagtattatcctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatgggcttgtcggatttgcagatgtcagagatcttttgtggttggatgaagaagccatggagcaaggtgtgtctgattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatccgaaggggctgttgaaaagatcttgaagaacttgattaaactgatctcggcactagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaactttagcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatccgtcttaggtatccctatcgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatctccaataagattagtaaatttattgattggctcaaggaaaaaattataccagcagctaaagagaaggtcgagtttttgagcaatctaaagcaactgccg-ttgttggaaaatcaaatctcaaacttggaacagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccgctttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggcactggaaagtccttggcaaccggtataattgcccgagcgatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaggtggtcacggttatggatgatctgtgccagaatcctgatggcaaggatatgtcactcttctgccagatggtgtctactgtagattttatcccaccaatggcttccttagaagagaaaggagtttcattcacatctaaatttgtcattgcatccaccaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcagattctacatggactgcgacatcgaggtaacggactcgtataaaacagatctgggtaggttagatgctggaagagctgccaaattatgctctgaaaacaacacagcaaacttcaaacgctgcagtccactagtgtgtggcaaggccatccaactaagagataggaagtccaaggttaggtacagtgtggacacagtggtttcagagctcataagggagtataataacaggtctgccattgggaatacaattgaagcgttgttccaggggccacccaagtttagacctatcaggatt---agtcttgaggagaagccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaggaggtgcgtcaatactgt-agagaccaaggttggatcattccagaaacccctactaacgttgagcgacatctaagtagggctgtactaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtatatgttatctacaaactctttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctgtcctccgtacggcaacggtgcagggacctagccttgattttgccctatccttgctgagaaggaacatcaggcaggttcagacagatcaagggcacttcaccatgttgggcgtcagagatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttagtggacgaacaaggggtcaatctagagctcactctaatcactcttgacaccaatgagaaattcagagacatcaccaaattcatcccagaaaacatcagtgctgctagtgacgccaccctagtgattaatacagagcacatgccctcaatgtttgtacctgtgggtgatgtcgtacaatacggtttcctgaatctcagtggtaaacccacccaccgcaccatgatgtacaacttccctactaaggcagggcagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaatggaccaactcgcaccaaacttgaacctagtgtattccatgacatctttgaaggcaacaaggaaccagcggtcttacacagtaaagaccctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtgggaaacacactacatgaacctgatgaatatatcaaggaagcagccctacattatgcaaatcagttgaagcagctagatatagatacctctcaaatgagcatggaagaagcttgctacggtacagacaatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttagggatcaagaagagggacatcttggaccccaccaccaaggatgtgagcaagatgaagttctacatggataagtatggtcttgatctcccttactctacctatgttaaggatgaactacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctggaaccgtgactggttcggccgtgggatgtaatccagacgtattttggagcaagttgccaatcttgctccctggttccctctttgctttcgactattcgggctatgatgctagcctcagcccagtttggtttagagcactggagttagttcttagggagataggctatagtaacgaagcagtctcactcattgaagggatcaaccatacacaccatgtgtatcgcaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattacttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaattagcaagaacgggtaaggagtatggattgaccctgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttctcaagagaggtttcttgcctgatgaacaatttccatttttgattcaccccaccatgccgatgaaggagattcatgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcacaatggcaagcaagaatatgagaaatttgtgagtgtaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggttgaat-------------------------acac---------------ctcaaccc-cactagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289388.1_Coxsackievirus_A6_isolate_CV-A6/P702/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------acagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcactcctg-tctccccggatcgagtatcaatagactgc-taacgcggttgaaggagaaaacgtccgttatccggctaactacttcgagaaact-tagtagcaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggctgatgagtcactgca-ttcctcacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttggta-----tacttg----tttgta-ggctttgttccac-----tcacaaa--------------tcgtacagtccat-actctgaagtacattttgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcacacgagactaagaacgtagcgactg-aagggtctactatcaacttcaccaacattaattactataaggactcttatgcagcgtcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgtcctgtcttagataccatcagggaggttgcagctccgttgcaatccccttctgtcgaggcgtgtggttatagtgaccgggtcgcacagttgaccgtgggcaactcaaccattactactcaagaggcagccaacattgtgttgagctacggagagtggccagagtattgtccttctatggacgctacagctgtggacaagcctacccgccctgacgtgtcagtgaataggttctacacactgtcaactaagagctggaagacag------------------aatctactggctggtactggaaattccctgacgtgctaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcaatgcaatgcaagtaaattccatcagggggccctcttagtagctgcaatccccgagttcgtagttgctgcaagtagccctgctacaaaacctaatggacaagggttgtacccagattttgctcacactaacccaggtaaaaatggtcaagagtttcgagatccttacgttttggacgctggaatccccctaagtcaagcgctggttttcccccatcagtggatcaatctacgaaccaataactgcgcaaccattattatgccatatgtcaacgcgctcccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaagtattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggtctccgacaagcaataaaacaagggttccctacagagctcaagcctgggaccaatcaattccttacaactgatgatgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgaattcacctccttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------c------accactagcactaccggg------gtcagcagattactaatccctgtacgagcgcagaata------atgtggaccaattgtgtgcgtcattccaagtggatcctggacgcaatggtccgtggcaatccacaatggttggtcagatctgtaggtactacactcaatggtctggttcccttaaagtaacctttatgttcacaggttcttttatggctacagggaaaatgctgatagcctacacaccacctggtagtgcccagcccactacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcaatcgtcagttaccttagttataccttggattagtaacactcattttagagcagttaagactggaggggtatatgactactacgcaactgggatcgtcaccatttggtatcagaccaactttgtggtgccaccagatacccccactgaggctaacattatagctcttggagcagcacagaagaactttaccctaaagctgtgcaaggacactgacgagatccaacaaacagcagaataccaaaatgatccc--------attgcaaatgcagtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatatctcgggtg--------------------------------accgcagccagcactgcagctagcacccactccctgggtacggggcgtgtaccagcattgcaagctgcagagacaggagcaagttctaatgctagtgatgaaaacctcattgaaactcgctgtgtgatgaatcgaaacggggtcaatgaggcaagtgtggagcacttttactctcgtgcagggctggtaggggttgtggaggtaaaggactcgggcactag----cctggatgggtacacagtttggcccatagacgtgatgggctttgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacctttgtgtccaacctcaatgatagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccgtaaaccggatagtaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaagtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggctaccccacatttggtgagcacaaacaagctactaatttgcaatatgggcagtgtcctaacaacatgatgggccactttgccatccgaacagtcagcgaatttaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcatgtgagagcttgggtacctaggccccttcggtcccaagcttatatggtcaaaaattacccgacatatagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---cacccctgattatgaaggcggggtaccggcaaacccacaaagaacatttggt------------------------------------------aagtttggccaacaatccggggctatttatgtgggtaactttagagtggtaaaccgacattttgccactcacaacgactgggcaaatttagtatgggaaagtagctcacgagaccttttggtgtcctccactactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactttaggaggaaacattacccggttagtttttccaagcctagtcttgtctttgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgagcccggggactgtggtggtatttttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatgggcttgtcgggtttgcagatgtcagagatcttttgtggttggatgaagaagtcatggagcagggtgtgtctgattacatcaaa-gggctcggtgacgcatttggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatccgaaggggctgttgaaaagatcttgaagaacttgattaaattgatctcagcactagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagtccctgggcgtggattaaggctaagacagcgtcagtcttaggtatccctatcgcccagaagcagagcgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggaaaaaattgtaccagcagctaaagagaaggtcgagtttttgagcaacttaaagcaactgccg-ttgttggaaaaccaaatctcaaacttggaacaatccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaagtaccaaccgctttatgctacagaagccaaaagggtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcgatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttataaacagcaagtggtcacggttatggatgatctgtgccagaatcctgatggcaaggatatgtcactcttctgccagatggtatctactgtagattttatcccaccaatggcttccttagaagagaaaggcgtttctttcacatctaaatttgttattgcatccaccaatgctagcaatattatagtaccaacagtgtctgattctgatgccattcgccgcagattctacatggactgtgacattgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaacaacacagcaaatttcaaacgttgcagtccactagtgtgtggcaaggccatccaactaagagataggaagtccaaggttaggtacagtgtggacacagtggtttcggaactcataagggagtataacaacaggtctgccattgggaatacaattgaagcgttgttccaggggccacccaaatttagacctattaggatt---agtcttgaggagaagccagcaccagatgttattagtgatcttcttgccagtgtagatagtgaggaggtgcgtcaatactgt-agagaccaaggttggatcataccagaaacccctactaacgttgagcgacatctaagtagggctgtactaatcatgcaatccatcgccacgactgttgcagtagtctcactggtatatgttatctataaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacccaccctccgtacggcaacggtgcagggacctagccttgattttgccctgtccttgctgaggaggaacattaggcaggtacagactgatcaagggcacttcaccatgttgggcgtcagggatcgcttagcagttctcccgcgccacgcgcagcctggaaaaacaatctgggtggaacataaactcgtaaacatcctggatgctgtcgagttagtagacgagcaaggggtcaacctagagcttactctaatcactcttgacactaatgagaagttcagagatatcaccagattcatcccggaaaccatcagtgctgctagtgacgccaccctagtgatcaatacagaacacatgccctcaatgtttgtacctgtgggtgatgttgtgcaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaactttcctactaaggcagggcagtgtggaggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttttgtgcgggacttaagaggagctactttgctagtgaacaaggggagatccaatgggtgaagtccaacaaagaaactgggagacttaacatcaatggaccaactcgcaccaaacttgagcctagtgtattccatgacatctttgagggtgacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtaggaaacacactacatgagcctgatgaatatatcaaggaagcagccctgcattatgcaaatcagctgaagcagctagatatagatacctctcaaatgagcatggaagaagcttgctacggcacagataatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccctggggatcaagaagagggacatcttggaccccaccaccagggatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccccgggaccgtgactggttcggccgtgggatgtaatccagacgtattttggagcaagttgccaatcttgctccctggttccctctttgctttcgactattcgggctatgatgctagcctcagcccagtttggtttagagcactagagttagttcttagggagataggctacagtaacgaagcagtctcactcattgaggggatcaatcatacacaccatgtgtatcgcaacaaaacttattgtgtacttggtgggatgccctcaggctgttcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattacttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggatgatgtacttgctagctacccttttcccattgactgctcagaattagccagaacgggtaaggaatatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttctcaagagaggcttcttgcctgatgaacaatttccatttttgattcaccccaccatgccgatgaaggagattcacgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcacaatggcaagcaggaatatgaaaaatttgtgagcgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggttgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaacat-g-aatg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289390.1_Coxsackievirus_A6_isolate_CV-A6/P731/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------acagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcactcctg-tctccccggatcgagtatcaatagactgc-taacgcggttgaaggagaaaacgtccgttatccggctaactacttcgagaaact-tagtagcaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggctgatgagtcactgca-ttccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttggta-----tacttg----tttgta-ggctttgttccac-----tcacaaa--------------tcgtacagtccat-actctgaagtacattttgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcacacgagacaaagaacgtagcgactg-aagggtctactatcaacttcaccaacattaattactataaggactcttatgcagcgtcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgtcctgtcttagataccatcagggaggttgcagctccgttgcaatccccttctgtcgaggcgtgtggttatagtgaccgggtcgcacagttgaccgtgggtaactcaaccattactactcaagaggcagccaacattgtgttgagctacggagagtggccagagtattgtcgttctacggacgctacagctgtggacaagcctacccgccctgacgtgtcagtgaataggttctacacactgtcaactaagagctggaagacag------------------aatctactggctggtactggaaattccctgacgtgctaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcaatgcaatgcaagtaaattccatcagggggccctcttagtagctgcaatccccgagttcgtagttgctgcaagcagccctgctacaaaacctaatggacaagggttgtatccagattttgctcacactaacccaggtaaaaatggtcaagagtttcgagatccttacgttttggatgctggaatccccctaagtcaagcgctggttttcccccatcagtggatcaatctacgaaccaataactgcgcaaccattattatgccatatgtcaacgcgctcccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaagtattgtaatggagctaccacagaggtaccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggttccctacggagctcaagcctgggaccaatcaatttcttacaactgatgatgggacatccccgccaatactgcctggttttgaaccaaccccattgattcacattcctggtgaattcacctccttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactagcactaccggg------gtcagtagattactaatccctgtacgagcgcagaaca------atgtggaccaattgtgtgcgtcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggtcagatctgtaggtactacactcaatggtctggttcccttaaagtaacctttatgttcacaggttcttttatggctacagggaaaatgctgatagcctacacaccacctggtagtgcccagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagttaccttagttataccttggattagtaacactcattttagagcagttaagactggaggggtatatgactactacgcaaccgggatcgtcaccatttggtatcagaccaacttcgtggtgccaccagatacccccactgaggctaacattatagctcttggagcagcacagaagaactttaccctaaagctgtgcaaggacactgacgagattcaacaaacagcagaatatcaaaatgatccc--------attgcaaatgcagtgg---aaaatgctgtgagcgcgcttgc--------------tgacaccacaatatctcgggtg--------------------------------accgcagccagtactgcagctagcacccactccctgggtacggggcgtgtaccagcattgcaagctgcagaaacaggagcaagttctaatgctagtgatgaaaacctcattgagactcgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggagcacttttactctcgtgcagggctggtaggggttgtggaggtaaaggactcgggcactag----cctggatgggtacacagtttggcccatagacgtgatgggctttgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgatagcacgacgcccgggatgctgctgcagtatatgtatgtaacaccaggggcccctaaaccagatagtaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaagtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggctaccccacatttggtgagcacaaacaagctactaatttgcaatatgggcagtgtcctaacaacatgatgggccactttgccatccgaacagtcagcgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcatgtgagagcttgggtacctaggccccttcggtcccaagcttatatggtcaaaaattacccgacatatagccaaac----aataactaacactgtaaccgaccgtgcaagcataac---cacccctgattatgaaggcggggtaccggcaaacccacaaagaacatttggt------------------------------------------aagtttggccaacaatccggggctatttatgtgggtaactttagagtggtaaaccgacattttgccactcataatgactgggcaaatttagtatgggaaagtagctcacgagaccttttggtgtcctccactactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactttagaaggaaacattacccggttagtttttccaagcctagccttgtctttgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattttgagcccggggactgtggtggtatttttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatgggcttgtcgggtttgcagatgtcagagatcttttgtggttggatgaagaagccatggagcagggtgtgtctgattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatccgaaggggctgttgaaaagatcctgaagaacttgattaagctgatctcagcactagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatcagtcttaggtatccctatcgcccagaagcagagcgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggaaaaaattgtaccagcagctaaagagaaggtcgagtttttgagcaacttaaagcaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaagtaccaaccgctttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggcataattgcccgagcgatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtagtcacggttatggatgatctgtgccagaatcctgatggcaaggatatgtcactcttctgccagatggtatctactgtagattttatcccaccaatggcttccttagaggagaaaggcgtttcattcacatctaaatttgttattgcatccaccaatgctagcaatattatagtaccaacagtgtctgattctgatgccattcgccgcagattctacatggactgcgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaacaacacagcaaacttcaaacgctgcagtccactagtatgtggcaaggccatccaactaagggataggaagtccaaggttaggtacagtgtggacacagtggtttcggagctcataagggagtataataacaggtctgccattgggaatacaattgaagcgttgttccaggggccacccaaatttagacctattaggatt---agtcttgaggagaagccagcaccagatgttattagtgatcttcttgccagtgtagatagtgaggaggtgcgtcaatactgt-agagaccaaggttggatcataccagaaacccctactaacattgagcgacatctaagtagggctgtactaatcatgcaatccattgccacgatcgttgcagtagtctcactggtatatgttatctataaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacccatcctccgtacggcaacggtgcagggacctagccttgattttgccctatccttgctgaggaggaacattaggcaggtacagacagatcaagggcacttcaccatgttgggcgtcagggatcgtttagcagttctcccgcgccacgcgcagcctggaaaaacaatctgggtggaacataaactcgtgaacatcctggatgctgtcgagttagtagacgagcaaggggtcaacctagagcttactctaattactcttgacactaatgagaaattcagagacatcaccaaattcatcccggaaaacatcagtgctgctagtgacgccaccctagtgatcaatacagagcacatgccctcaatgtttgtacctgtgggtgatgttgtgcaatatggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaactttcctactaaggcagggcagtgtgggggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttttgtgcgggacttaagaggagctactttgctagtgaacaaggagagatccaatgggtgaagcctaacaaagaaactgggagacttaacatcaatggaccaactcgcaccaaacttgaacctagtgtattccatgacatctttgagggcgacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcactgttctctaagtacgtgggaaacacactacatgagcctgatgaatatatcaaggaagcagccctgcattatgcaaatcagctgaagcagctagatatagatacctctcaaatgagcatggaagaagcttgctatggtacagataatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccctggggatcaagaagagggacatcttggaccccaccaccagggatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacacctctatgaagctttccatgcaaatcccgggaccgtgactggttcggccgtgggatgtaatccagacgtattttggagcaagttgccaatcttgctccctggttccctctttgctttcgactattcgggctatgatgctagcctcagcccagtttggtttagagcgctagagttggttcttagggagataggctacagtaacgaagcagtctcactcattgaagggatcaatcatacacaccatgtgtatcgcaacaaaacttattgtgtacttggtgggatgccctcaggctgctcaggaacatccattttcaactcaatgattaacaacatcatcattagatcattacttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagctacccttttcccattgactgctcagaattagcaagaacgggtaaggaatatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttctcaagagaggcttcttgcctgatgaacaatttccatttttgattcaccccaccatgccgatgaaggagattcacgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcacaatggcaagcaagaatatgaaaaatttgtgagcgcaattaggtctgtcccaataggaaaggcattggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggttgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaacat-g-aatg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF682363.1_Coxsackievirus_A6_strain_SZc294/13_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccgcccaca-gggcccac-t-gggcgtcagcacactgattctatggaatccttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gcaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcactcctg-tctccccggatcgagtatcaatagactgc-taacgcggttgaaggagaaaacatccgttatccggctaactacttcgagaaact-tagtagcaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggctgatgagtcactgca-ttccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttggta-----tacttg----tttgta-ggctttgttccac-----tcacaaa--------------tcgtacagtccat-actctgaagtacattttgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcacacgagacaaagaacgtagcgactg-aagggtctactatcaacttcaccaacattaattactacaaggactcttatgcagcgtcagctagtaggcaggattttgcacaagatcctgcaaagttcacacgtcctgtcttagataccatcagggaggttgcagctccgttgcaatccccttctgtcgaggcgtgtggttatagtgaccgggtcgcacagttgaccgtgggcaactcaaccattactactcaagaggcagccaacattgtgttgagctacggagagtggccagagtattgtccttctacggacgctacagctgtggacaagcctacccgccctgacgtgtcagtgaataggttctacacactgtcaactaagagctggaagacag------------------aatctactggctggtactggaaattccctgacgtgctaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcaatgcaatgcaagtaaattccatcagggggccctcttagtagctgcaatccccgagttcgtagttgctgcaagcagccctgctacaaaacctaatggacaagggttgtacccagattttgctcacactaacccaggtaaaaatggtcaagagtttcgagatccttacgttttggacgctggaatccccctaagtcaagcgctggttttcccccatcagtggatcaatctacgaaccaataactgcgcaaccattattatgccatatgtcaacgcgctcccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagtcctttaaagtattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggttccccacagagctcaagccagggaccaatcaatttcttacaactgatgatgggacatccccgccaatactgcctggttttgaaccaactccactgattcacattcctggtgaattcacctctctattagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactagcactaccggg------gtcaatagattactaatccctgtacgagcgcagaaca------atgtggaccaattgtgtgcatcattccaagtggatcctgggcgcaacggcccgtggcaatccacaatggttggtcagatctgtaggtactacactcaatggtctggttcccttaaagtaacctttatgttcacaggttcttttatggctacagggaaaatgctgatagcctacacaccacctggtagtgcccagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagttaccttagttataccttggattagtaacactcattttagagcagttaagactggaggggtatatgactactacgcaaccgggatcgtcaccatttggtatcagaccaacttcgtggtgccaccagatacccccactgaggctaacattatagctcttggagcagcacagaagaactttaccctaaagctgtgcaaggacactgacgagatccaacaaacagcagaataccaaaatgatccc--------attgcaaatgcagtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatatctcgggtg--------------------------------accgcagccagcactgcagctagcacccactccctgggtacggggcgtgtaccagcattgcaagctgcagaaacaggagcaagttccaatgctagtgatgaaaacctcattgagactcgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggagcacttttactctcgtgcagggctggtgggggttgtggaggtaaaggactcgggcactag----cctggatgggtacacagtttggcccatagacgtgatgggctttgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgatagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaaaccggatagtaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccccacatttggtgagcacaaacaagctactaatttgcaatatgggcagtgtcctaacaacatgatgggccactttgccatccgaacagtcagcgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcatgtgagagcttgggtgcctaggccccttcggtcccaagcttatatggttaaaaattacccgacatatagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccactgattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacaatccggggctatctatgtgggtaactttagagtggtaaaccgacatcttgccactcataatgactgggcaaatttagtatgggaaagtagctcacgagaccttttggtgtcctccactactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactctagaaggaaacattacccggttagtttttccaagcctagcctcgtctttgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgagcccggggactgtggaggtattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatgggcttgtcgggtttgcagatgtcagagatcttttgtggttggatgaagaagccatggagcagggtgtgtctgattacatcaaa-gggcttggtgacgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatccgaaggggctgttgaaaagatcttgaagaacctgattaaactgatctcagcactagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatcagtcttaggtatccctatcgcccagaagcagagcgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttatcgattggctcaaggaaaaaattgtaccagcagctaaagagaaggtcgagtttttgagcaacttaaagcaactgccg-ttgttagaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaagtaccaaccgctttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcgatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacggttatggatgatctgtgccagaatcctgatggcaaggatatgtcactcttctgccagatggtatctactgtagattttatcccaccaatggcttccttagaagagaaaggcgtttcattcacatctaaatttgttattgcatccaccaatgctagtaatatcatagtaccaacagtgtctgattctgatgccattcgccgcagattctacatggactgcgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaacaacacagcaaacttcaaacgctgcagtccactagtgtgtggcaaggccatccaactaagagataggaagtccaaggttaggtacagtgtggacacagtggtttcggagctcataagggagtataataacaggtctgccattgggaatacaattgaagcgttgttccaggggccacccaaatttagacctattaggatt---agtcttgaggagaagccagcaccagatgttattagtgatcttcttgccagtgtagatagtgaggaggtgcgtcaatactgt-agagaccaaggttggatcataccagaaacccctactaacgttgagcgacatctaagtagggctgtactaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtatatgttatttataaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtactcaagaaacccaccctccgtacggcaacggtgcagggacctagccttgattttgccctatccttgctgaggaggaatattaggcaggtacagacagatcaagggcacttcaccatgttgggcgtcagggatcgcttagcagttcttccgcgccacgcgcagcctggaaaaacagtctgggtggaacataaactcgtgaacatcctggatgctgttgagttagtagacgagcaaggggtcaacctagagcttactctaatcactcttgacactaatgagaaattcagagacatcaccaaattcatcccggaaaacatcagtgctgctagtgacgccaccctagtgatcaatacagagcacatgccctcaatgtttgtacccgtgggtgatgttgtgcaatacggtttcctgaatctcagtggaaaacccacccaccgcactatgatgtacaactttcctactaaagcagggcagtgtggaggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttttgtgcgggacttaagaggagctactttgctagtgaacaaggagagacccaatgggtgaagcctaacaaagaaactgggagacttaacatcaacggaccaactcgcaccaaacttgaacctagtgtattccatgacatctttgagggcgacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtgggaaacacactacatgagcctgatgaatatatcaaggaagcagccctgcattatgcaaatcagctgaagcagctagatatagatacctctcaaatgagcatggaagaagcttgctacggtacagataatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccctggggatcaagaagagggacatcttggaccccaccaccagggatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactctacctatgttaaggacgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaacccagggaccgtgactggttcggccgtgggatgtaatccagatgtattttggagcaagttgccaatcttgctccctggttccctctttgctttcgactattcgggctatgatgctagcctcagcccagtttggtttagagcactagagttagttcttagggagataggctacagtaacgaagcagtctcactcattgaagggatcaatcatacacaccatgtgtatcgcaacaaaacttattgtgtacttggtgggatgccctcaggctgttcaggaacatctattttcaactcaatgattaacaacatcatcattagatcattacttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagctacccttttcccattgactgctcagaattagcaagaacgggtaaagaatatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttctcaagagaggcttcttgcctgatgaacaatttccatttttgattcaccccaccatgccgatgaaggagattcacgaatccattcggtggactaaggatgcacgcaacactcaagatcacgtgcgatccttgtgtctattggcgtggcacaatggcaagcaagaatatgaaaaatttgtgagcgcaattaggtctgtcccaataggaaaagcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggttgaat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaacat-g-aatg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP144342.1_Coxsackievirus_A6_isolate_V7/Ed/UK/2013_polyprotein_gene_partial_cds
--------------------------------------------------------------------------------------------------------------------------------------------------aaatt-gtaacgtagaaga------------atggtactttatc-gatcaa-tagcaggcatggcgcaccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgtg-aagggtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcagtcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--taaccaacagagcattaata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtacagtccat-actctaaagcacattttgattctgaacaacagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtccactattaactttaccaacatcaattactataaggactcttatgcagcgtcagctagtagacaggattttgcacaagatcccgcaaagtttacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaatattgtattgagctacggggagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaatagattctacacactgtcaactaagagttggaagacag------------------aatccactggctggtactggaaattccctgatgtgctaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagtaagttccatcagggggcactcttagtggctgcaatccccgaattcgtggtcgctgcaagcagccctgctacgaagcctaatggacaagggttgtacccagattttgctcacactaacccaggtaaaagtggtcaagagtttcgagatccttatgtcttggacgctggagtccccttaagtcaagcactggtttacccccatcaatggatcaatttacgaaccaataactgcgcaaccattatcatgccatatgtcaatgcgcttccgtttgattcagcgcttaaccactcaaattttggattggttgtgattcctattagccccttaaaatattgtaatggagccaccacagaggtgccaatcacactaaccattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaaggatttcccacagagctcaagcctgggaccaaccaatttcttacaactgacgacgggacatccccgccaatactgcctggttttgaaccaacaccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accaccggcaccaccggg------gtcagtagattgctaatccccgttcgagcgcagaata------atgtggatcagttgtgtgcatcattccaagtagatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttccctcaaggtaaccttcatgttcacaggttcttttatggccacaggtaaaatgctgatagcctacacaccacctggtagtgcccagcccgctacaagagaagcagcgatgcttggaacgcatatagtgtgggattttggtttgcaatcatctgttaccctagttataccttggattagtaacacccattttagggcagtcaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccagactaacttcgtagtgccaccagacacccctactgaggctaacattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggatactgacgagatccaacaaacagcagagtaccaaaatgatccc--------attgcaaatgcagtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------actgcagccaacactgcagttagcacccactccctgggcacagggcgtgtaccagcactgcaagctgcagaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggggttgtggaggtgaaggattcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgatagcacgacgcccgggatgctgttgcagtacatgtacgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtatttgcaaaactgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttaccagtggttttatgatggttaccctacatttggtgagcacaaacaagctgccaatttgcaatatggacagtgccctaacaacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagtataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctacgtaggcaactttagagtggtgaaccgacatctcgccactcataatgattggacaaatctagtatgggaaagtagttcacgagaccttctggtgtcctccactactgctcaagggtgtgataccatcgcccgatgtgactgtcaaacaggagtgtattactgcaactctagaaggaaacactacccagttagtttttctaagcctagccttgtcttcgtggaagctagtgaatactatcctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggtattcttaggtgccaacatggtgtgattggcatcgtgtccactggtggtaatggacttgtcggatttgcagatgttagagatcttttgtggctggatgaagaggccatggaacagggtgtgtcagattacatcaaa-gggctcggtgatgcattcggaactggtttcactgatgcagtgtctagggaagtggaagctcttaagaactatcttataggatctgaaggagctgttgagaagatcttgaagaatttgattaaattgatctcagcactagtcatagtgatcagaagtgattacgacatggtaactctcacagcaaccttagcactcataggatgtcacggcagtccatgggcgtggatcaaggctaaaacagcatccattttgggtatccctattgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagatcagtaagtttattgattggctcaaggagaaaatcataccagcagctaaagagaaggtcgagtttttgagtaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtccgccgcttcacaggaagaccttgaggcaatgtttggaaatgtgtcgtatctcgccca---------cttttgccgtaaataccaaccactatatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgtcagaatcctgatggcaaggacatgtcactcttttgccagatggtatctactgtagactttatcccaccaatggcttctttagaagagaaaggagtctcatttacatctaaatttgtcattgcatccaccaatgctagcaacatcatagtaccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaacaacacggcaaacttcaaacgctgcagtccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagcttataagggaatacaataacaggtctgctattggaaatacgattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agccttgaggagatgccagcaccagatgttattagcgatcttcttgccagtgtggatagtgaggaggtgcgccaatactgt-agagaccaaggttggatcataccggaaacccctactaatgttgagcgacatctaagtagggctgtactagtcatgcaatccatcgccacgattgttgcagtagtttcactggtgtatgttatctacaaactttttgctggatttcagggtgcatattctggcgctcctaagcaagtgctcaggaaacctatcctccgtacggcaacggtccagggacctagccttgattttgccctttccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccactcgcagcccgggaaaacaatctgggtggaacacaaactcgtgaacgtcctggatgctgtcgagttagtggatgagcaaggggtcaacctggagctcaccctaatcactcttgataccaatgagaaattcagagatatcaccaaattcattccagaaaacatcagcgctgctagtgatgccaccctagtgattaatacagaacacatgccctcaatgttcgtacctgtgggtgatgtcgtacagtacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtagtgacgtcagttgggaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcggggctcaagaggagttactttgctagtgagcaaggagagatccaatgggtgaagtctaacaaagaaactgggagacttaacatcaacgggccaacccacaccaaactcgaacctagtgtattccatgatatctttgagggcaacaaggaaccagcggtcttacacagcaaagaccctcgcctcgaagtagattttgagcaggcattgttctctaagtatgtaggaaacacactacatgagcctgatgagtatatcaaggaggcagccctacattatgcaaatcagttgaagcagctagatatagatacctctcaaatgagcatggaagaagcttgctacggtacagacaatcttgaggctattgatcttcacactagtgcaggctacccctacagcgccctggggatcaagaagagggacatcttagaccctaccaccagggatgtgagcaagatgaagttctacatggataagtatggtcttgacctcccttactctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaagctttccatgcaaatcctgggaccgtaactggttcggctgtgggatgtaacccagatgtgttttggagcaagttgccaatcttgctccctggttccctctttgcttttgactactcgggctatgatgctagcctcagcccagtttggtttagagcactggagttagttcttagagagataggctatagtaacgaggcagtctcactcattgaagggatcaatcatacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatctatctttaactcaatgattaacaacatcatcattagagcactgctcatcaaaacatttaagggtattgacttggatgaactcaacatggttgcttatggggacgatgtgcttgctagttacccttttcccattgactgctcagaactagcaagaacgggcaaggagtatggtttgaccatgacccctgcggataagtctctttgcttcaatgaagttaattgggaaaatgcaacctttcttaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccgatgaaagagattcatgaatctattcggtggactaaggatgcacgcaatactcaagatcatgtgcggtccttgtgtctattggcgtggcacaacgg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LC126159.1_Coxsackievirus_A6_genomic_RNA_complete_genome_strain:_Hyogo9192
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttatg-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-taacgcggttgaaggagaaaacatccgttacccgactaactacttcgagaaact-tagtagtaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-acccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccgg--tgaccaatagagctttgata-----tacttg----tttgta-ggttttgttccac-----tcacaaa--------------tcgtacagtccat-actctgaagtatattttaattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacgaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaggactcctatgcagcgtcagctagtagacaggattttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgtggttatagtgaccgagttgcacagctgactgtgggcaactcaaccattactacccaagaggctgccaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctatacattgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgacgtactaaatgatacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcaggtttctgcatgcacgtccagtgcaatgcaagcaaattccatcagggggccctcttagtggctgcaatccccgaattcgtagttgctgcaagtagccctgctacaaaacctaatggacaagggttgtacccggatttcgctcatactaacccaggtaaaggtggtcaagagtttcgagatccttatgtcttggatgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaacaactgcgcaaccattattatgccatatgtcaacgcgcttccatttgactcagcgctcaaccactcaaattttggattggtagtgatccctattagcccattaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggtctccgacaagcaataaaacaagggctccctacagagctcaagcctgggaccaatcaatttcttacaactgatgatgggacatccccgccaatactgcctggttttgaaccaactccattgattcatattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accaccggcaccaccggg------gtcagtagattactaatccctgttcgagcgcagaaca------atgtggaccagttgtgtgcatcatttcaagtggatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgtttacagggtcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcggcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagttaccttggttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccagaccaacttcgtggtgccaccagatactcccactgaggctaacattatagctcttggagcagcacaaaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcggagtaccaaaatgatccc--------attacaaatgctgtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatgtcccgggtg--------------------------------accgcagccagcactgcagtcagcacccactccctgggtacggggcgcgtaccagcattgcaagctgcagagacgggagcaagttccaatgctagtgatgagaaccttattgagactcgttgtgtgatgaatcgaaacggagtcaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggggttgtggaggtgaaggactcgggcactag----cttggatgggtacacagtttggcccatagacgtgatgggttttgtgcaacagcggcgtaaactagagctgtcaacgtacatgcgctttgatgccgagttcacttttgtgtccaacctcagtgatagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccccaaaccggatagcaggaaatcataccaatggcagactgctactaacccgtcagtattcgcaaaattaagtgatccacccccccaagtgtctgttccgttcatgtcgccagcaacagcttatcaatggttttatgatggttatcctacatttggtgagcacaaacaagccactaatttacagtatgggcagtgccctaacaacatgatgggccattttgccatccgaacagttagtgaatctaccaccggaaaaaacgtccacgttcgggtgtacatgagaattaaacacgtgagagcttgggtacctagaccccttcggtcccaagcgtatatggtcaagaattacccgacatatagccaaac----aataacaaatactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagcttggccaacaatccggggctatctatgtgggtaactttagagtggtaaatcgacatctcgccactcataatgattgggcaaatttagtgtgggaaagtggctcaagagaccttctggtgtcctctactactgctcaaggatgtgataccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctaaaaggaaacattacccggtcagtttttctaagcctagcctcgtctttgtggaagctagtgagtactatcctgccaggtatcagtcgcacctcatgcttgcgaagggacactctgaacctggggactgtggtggtattcttaggtgccagcatggcgtgattggtatcgtgtctactggtggtggtggacttgttggatttgcagatgtcagagatcttttgtggttggatgaagaagccatggaacagggtgtgtctgattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagacctaccttataggatctgaaggggctgttgagaggatcttgaagaatttggttaaactgatctcggcactagttatagtgatcagaagtgactatgacatggtaaccctcacagcaaccttggcgctcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatccatcttgggcatccctatcgcccagaaacagagtgcatcatggctcaagaagtttaacgacatggccagtgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggaaaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaagcaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtccgctgcttcacaagaagaccttgaggcaatgtttgggaatgtgtcatatctcgctca---------cttctgccgtaaataccaaccgctttatgctacagaagccaaaagagtttatgctttagagaagaggatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctctccaggcactggaaagtccttggcaaccggtataattgcccgagcaataactgacaaatatcactcaagcgtgtactcacttccaccagatccagatcactttgatgggtacaaacagcaagtggtcacagttatggacgatctatgccagaatcctgatggtaaggatatgtcactcttttgccagatggtatctactgtagattttattccaccaatggcttctttagaagagaaaggagtttcattcacatctaaatttgtcattgcatccaccaatgctagcaacatcatagtaccaacagtgtctgactccgatgctattcgccgcaggttctatatggactgtgacatcgaggtgacggattcgtacaaaacagatctgggtaggttagatgctggaagggctgccaaattatgctctgaaaacaacacagcaaatttcaaacgctgcagcccactagtgtgtgggaaagccatccaactaagagataggaagtccaaagttaggtacagtgtggacacagtggtttcagagctcataagggagtataacaataggtctgctattgggaacacaattgaagcgttgtttcaggggccacccaagtttagacctattaggatt---agtcttgaggagaagccagcaccagacgtcattagcgatcttcttgctagtgtggatagtgaagaggtgcgccaatactgt-aaggaccaaggctggatcataccagaaacccctaccaacgttgagcggcatttaagtagggctgtactaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggtgctcctaaacaagtgctcaagaggcctaccctccgtacggcaatggtgcagggacctagccttgactttgctctatccctgctgagaaggaatatcaggcaggttcagacggaccaagggcacttcaccatgctgggtgtcagggatcgcttagcagtcctcccacgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttagtggacgagcaaggggtcaacctagagctcactctaatcactcttgatactaatgagaagttcagagacatcaccaaattcattccagaaaacatcagtgctgctagtgacgccaccttagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtgcaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcagggcagtgtggaggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggactcaagaggagctactttgctagtgagcaaggagagatccaatgggtgaagcctaacaaagaaactgggaggcttaatattaatgggccaactcgcaccaaactcgaacctagtgtattccatgacatctttgagggcaataaggaaccagcggtcttacacagtaaagaccctcgcctcgaggtagattttgagcaggcattgttctcaaagtatgtgggaaacacactacatgagcctgatgaatacatcaaggaggcagcactacactatgcaaatcagttgaaacagctggatatagatacctctcaaatgagcatggaagaggcatgctacggtacagataatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacattttagaccccaccactagggatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttacactacctatgttaaggatgagctacgctcaatagataagattaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctttatgaaactttccacgcaaaccctgggactgtgactggttcggctgtgggatgtgatccagatatattttggagtaagttgccagtcctgctccctggttccctctttgctttcgactactcgggctatgacgccagcctcagcccagtttggtttagagcactggagttagttcttagagagataggatacagtgacgaagcagtctcactcattgaagggatcaaccacacacaccacgtataccgtaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgataaacaacatcatcattagatcattactcatcaaaacatttaagggcattaacctggatgaactcaatatggttgcttatggagacgatgtgcttgctagttacccctttcccattgattgctcagaactagcaagaacgggtaaggagtatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttctcaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccgatgaaggagattcatgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaagcaagaatatgaaaaatttgtgagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggttgcat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aataac--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LC126161.1_Coxsackievirus_A6_genomic_RNA_complete_genome_strain:_Hyogo9205
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-taacgcggttgaaggagaaaacatccgttacccgactaactacttcgagaaact-tagtagtaccatcgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-acccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattggg-------agattgttaccatatagctattggattggccatccgg--tgaccaatagagctttgata-----tacttg----tttgta-ggttttgttccac-----tcacaaa--------------tcgtacagtccat-actctgaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacgaagaatgtagcgactg-aagggtctactatcaacttcaccaacatcaattactataaggactcctatgcagcgtcagctagtagacaggattttgcacaagatcctgcaaagttcacacgtcctgtcttagataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgtggttatagtgaccgagttgcacagctgactgtgggcaactcaaccattactacccaagaggctgccaacattgtattgagctacggagaatggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctatacattgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgacgtactaaatgacacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcaggtttctgcatgcacgtccagtgcaatgcaagcaaattccatcagggggccctcttagtggctgcaatccctgaattcgtggttgctgcaagtagccctgctacaaaacctaatggacaagggttgtacccggatttcgctcatactaacccaggcaaaggtggtcaagagtttcgggatccttatgtcttggatgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatctacggactaataactgcgcaaccattattatgccatatgtcaacgcgcttccatttgactcagcgctcaaccactcaaattttggattggtagtgatccctattagcccattaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggctccctacagagctcaagcctgggaccaatcaatttcttacaactgatgatgggacatccccgccgatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accaccggcaccaccggg------gtcagtagattactaatccctgttcgagcgcagaaca------atgtggaccagttgtgtgcatcatttcaagtggatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgtttacaggttcttttatggccacagggaagatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaggcggcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagttaccttggttataccttggattagtaatacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccagaccaacttcgtagtgccaccagatacccccactgaggctaacattatagctcttggagcagcacagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcggagtaccaaaatgatccc--------attacaaatgctgtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccagcactgcagtcagcacccactccctgggtacggggcgtgtaccagcattgcaagctgcagagacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggggttgtggaggtgaaggactcgggcactag----tttggatgggtacacagtttggcccatagacgtgatgggttttgtgcaacagcggcgcaaactagagctgtcaacgtacatgcgctttgatgccgagttcacttttgtgtccaacctcagtgatagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccccaaaccggatagcaggaaatcgtaccaatggcagactgctactaacccgtcagtattcgcaaaattaagtgatccacccccccaagtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagccactaatttacaatatgggcagtgccctaacaacatgatgggccattttgccatccgaacagttagtgaatctaccaccggaaaaaacgtccacgttcgggtgtacatgagaattaaacacgtgagagcttgggtacctagaccccttcggtcccaagcgtatatggtcaagaattacccgacatatagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagcttggccaacaatccggggctatctatgtgggtaactttagagtggtgaatcgacatctcgccactcataatgattgggcaaatttagtatgggaaagtagctcgcgagaccttctggtgtcctctactactgctcaaggatgtgataccattgcccgatgcgactgtcaaacaggggtgtattactgcaactctaaaaggaaacattacccggtcagtttttctaaacctagcctcgtctttgtggaagctagtgagtactatcctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacctggggactgtggtggtattcttaggtgccagcatggcgtgattggtatcgtgtctactggtggtggtggacttgttggatttgcagatgtcagagatcttttgtggttggatgaagaagccatggaacagggtgtgtctgattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaagtggaagctcttaagacctaccttataggatctgaaggggctgttgagaagatcttgaagaatttgattaaactgatctcggcactagttatagtgatcagaagcgactatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagtccctgggcgtggatcaaggccaagacagcatccatcttaggcatccctatcgcccagaaacagagtgcatcatggctcaagaagtttaacgatatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggaaaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaagcaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtccgctgcttcacaagaagaccttgaggcaatgtttgggaatgtgtcatatctcgctca---------cttctgccgtaaataccaaccgctttatgctacagaagccaaaagagtttatgctttagagaagaggatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctctccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaatatcactcaagcgtgtactcacttccaccagatccagatcactttgatgggtacaaacagcaagtggtcacagttatggacgatctatgccagaatcctgatggtaaggatatgtcactcttttgccagatggtatctactgtagattttatcccaccaatggcttctttggaagagaaaggagtttcattcacatctaaatttgtcattgcatccaccaatgctagcaacatcatagtaccaacagtgtctgattccgatgctattcgccgcaggttctacatggactgcgacatcgaggtgacggattcgtacaagacagatctgggtaggttagatgctggaagggctgccaaattatgctctgaaaacaacacagcaaatttcaaacgctgcagcccactagtgtgtgggaaagccatccaactaagagataggaaatctaaggttaggtacagtgtggacacagtggtctcagagctcataagggagtataacaataggtctgctattgggaacacaattgaagcgttgtttcaggggccacccaagtttagacctattaggatt---agtcttgaggagaagccagcaccagacgtcattagcgatcttcttgccagtgtggatagtgaggaggtgcgccaatactgt-aaggaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggtgctcctaaacaagtgctcaagaggcctaccctccgtacggcaatggtgcagggacctagccttgactttgctctatccctactgagaaggaacatcaggcaggttcagacggaccaagggcacttcaccatgttgggcgtcagggatcgcttagcagttctcccacgccactcacagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttagtggacgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaagttcagagacatcaccaaattcatcccagaaaacatcagtgctgctagtgacgccaccttagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtgcaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcagggcagtgtggaggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggactcaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagagactgggaggcttaacattaatgggccaactcgcaccaaactcgaacctagtgtattccatgacatctttgagggcaataaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtaggaaacacactacatgagcctgatgaatacatcaaggaggcagccctacactatgcaaatcagttgaagcagctagatatagatacctctcaaatgagcatggaagaggcttgctacggtacagataatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacattttagaccccaccactagggatgtgagcaagatgaagttctacatggataagtatggtcttgacctcccttacactacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtgatccagatatattttggagtaagttgccagtcctgctccctggttccctctttgctttcgactactcgggctatgatgccagcctcagcccagtttggtttagagcactggagttagttcttagagagataggatacagtgacgaagcggtctcactcattgaagggatcaaccacacacaccacgtataccgtaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgataaacaacatcatcatcagatcattacttatcaaaacatttaagggtattgacctggatgaactcaatatggttgcttatggggacgatgtgcttgctagttacccctttcccattgattgctcagaactagcaagaacgggtaaggagtatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttctcaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccgatgaaggagattcatgaatccatccggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggcaagcaagaatatgaaaaatttgtgagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggcttgaattattct-----agaggttgcat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LC126162.1_Coxsackievirus_A6_genomic_RNA_complete_genome_strain:_Hyogo9288
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacatccgttacccgactaactacttcgagaaact-tagtagtaccattgaagctgcagggtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-acccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattggg-------agattgttaccatatagctattggattggccatccgg--tgaccaatagagctttgata-----tacttg----tttgta-ggttttgttccac-----tcacaaa--------------tcgtacagtccat-actctgaagtatattttgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacgaagaatgtagcaactg-aagggtctactatcaacttcaccaacattaattactataaggactcttacgcagcgtcagctagtaggcaggatttcgcgcaagatcctgcaaagttcacacgacctgtcttagataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgtggttatagtgaccgagttgcacagctgactgtgggcaactcaaccatcactacccaagaagctgccaacattgtattgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctatacattgtcaaccaagagttggaagacag------------------aatctactggctggtattggaagttccctgatgtactaaatgatacaggagttttcggtcaaaacgcccaattccactacttgtaccgctcaggtttctgcatgcacgtccagtgcaatgcaagcaaattccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagtagccctgctacaaaacctaatggacaagggttgtacccggatttcgctcatactaacccaggtaaaggtggtcaagagtttcgggatccttatgtcttggatgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatctacggactaataactgcgcaaccattattatgccatatgtcaacgcgcttccatttgactcagcgctcaaccactcaaattttggattggtagtgatccctattagcccattaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggctccctacagagctcaagcctgggaccaatcaatttcttacaactgatgatgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accaccggcaccaccggg------gtcagtagattactaatccctgttcgagcgcagaaca------atgtggaccagttgtgtgcatcatttcaagtggatcctgggcgcaatggcccatggcaatccacaatggttggtcagatctgtaggtattatactcaatggtctggttcccttaaggtaacctttatgtttacaggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccactacaagggaagcggcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagtcaccttggttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccagaccaacttcgtagtgccaccagatacccccactgaggctaacattatagctcttggagcagcacagaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcggagtaccaaaatgatccc--------attacaaatgctgtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccagcactgcagtcagcacccactccctgggtacggggcgcgtaccagcattgcaagctgcagagacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcggaacggggtcaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggggttgtggaggtgaaggactcgggcactag----cttggatgggtacacagtttggcccatagacgtgatgggttttgtgcaacagcggcgcaaactagagctgtcaacgtacatgcgctttgatgccgagttcacttttgtgtctaacctcagtgatagcacgacgcccgggatgctactgcagtatatgtatgtaccaccaggggcccccaaaccggatagcaggaaatcataccaatggcagactgctactaacccgtcagtattcgcaaaattaagtgatccacccccccaagtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttatcctacatttggtgagcacaaacaagccactaatttacagtatgggcagtgccctaacaacatgatgggccattttgccatccgaacagttagtgaatctaccactggaaaaaacgtccacgttcgggtgtacatgagaattaaacacgtgagagcttgggtacctagaccccttcggtcccaagcgtatatggttaagaattacccaacatatagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagcttggccaacagtccggggctatctatgtgggtaactttagagtggtaaatcgacatcttgccactcataatgattgggcaaatttaatatgggaaagtagctcacgagacctcctggtgtcctctactactgctcaaggatgcgataccattgcccgatgcgactgtcaaacaggagtgtattactgcaactctaaaaggaaacattacccggtcagcttttctaaacctagcctcgtctttgtggaagctagtgagtactatcctgccaggtatcaatcgcacctcatgcttgcgaagggacattctgaacctggggactgtggtggtattcttaggtgccagcatggcgtgattggtatcgtgtctactggtggtggtggacttgttggatttgcagatgtcagagatcttttgtggttggatgaagaagccatggaacagggtgtgtctgattacatcaaa-gggctcggtgacgcattcggaactgggtttactgatgcagtgtccagggaagtggaagctcttaagacctaccttataggatctgaaggggctgttgagaagatcttgaagaatttgattaaactgatctcagcactagttatagtgatcagaagcgactatgacatggtaaccctcacagcaaccttggcactcatagggtgccatggcagtccctgggcgtggatcaaggccaagacagcatccatcttaggcattcctatcgcccagaaacagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagcaaatttattgattggctcaaggaaaaaattataccagcagctaaagaaaaggtcgagtttttgagcaacctaaagcaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtccgctgcttcacaagaagaccttgaggcgatgtttgggaatgtgtcatatctcgctca---------cttctgccgtaaataccaaccgctttatgctacagaagccaaaagagtttatgctttagagaagaggatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctctccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaatatcactcaagcgtgtactcactcccaccagatccagatcactttgatgggtacaaacagcaagtggtcacagttatggacgatctatgccagaatcctgatggtaaggatatgtcactcttttgccagatggtatctactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatctaaatttgtcattgcatccaccaatgctagcaacatcatagtaccaacagtgtctgattccgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggattcgtacaaaacagatctgggtaggttagatgctggaagggctgccaaattatgttctgaaaacaacacagcgaatttcaaacgctgcagcccactagtgtgtgggaaagccatccaactaagagataggaagtccaaggttaggtacagtgtggacacagtggtttcagagctcataagggagtataacaataggtctgctattgggaacacaattgaagcgttgtttcaggggccacccaagtttagacctattaggatt---agtcttgaggagaagccagcaccagacgtcattagtgatcttcttgccagtgtggatagtgaggaggtgcgccaatactgt-aaggaccaaggttggatcataccagaaacccctaccaacgttgaacgacatctaagtagggctgtactaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggtgctcctaaacaagtgctcaagaggcctaccctccgtacggcaatggtgcagggacctagccttgactttgctctatccctgctgagaaggaacatcaggcaggttcagacggaccaagggcacttcaccatgttgggcgtcagggatcgcttagcagttctcccacgccactcgcagcccggaaaaacaatctgggtagaacacaaactcgtgaacatcctggatgctgtcgagttagtggacgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaagttcagagacatcaccaaattcattccagaaaacatcagtgctgctagtgacgccaccttagtgattaatacagaacacatgccctcaatgtttgtacctgtgggtgatgtcgtgcaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcagggcagtgtggaggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcaggactcaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggaggcttaacatcaatgggccaactcgcaccaaactcgaacctagtgtattccatgacatctttgagggcaataaggaaccagcggtcttacacagcaaagaccctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtaggaaacacactacatgagcctgatgaatacatcaaggaggcagccctacactatgcaaatcagttgaagcagctagatatagatacctctcaaatgagcatggaagaggcttgctacggtacagataatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacattttagaccccactactagggatgtgagcaagatgaagttctacatggataagtatggtcttgacctcccgtacactacctatgttaaggatgagctacgctcaatagataagatcaagaaagggaaatcccgcttaattgaagctagcagtttgaatgactcagtttaccttagaatggccttcgggcatctctatgaaactttccatgctaaccctgggactgtgactggttcggctgtgggatgtgacccagatatattttggagtaagttgccagtcctgctccctggttccctctttgctttcgactactcgggctatgacgccagcctcagcccagtttggtttagagcactggagttagttcttagagagataggatacagcgacgaagcagtctcactcattgaagggatcaaccacacacaccacgtatatcgtaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgataaacaacatcattattagatcattactcatcaagacatttaagggtattgacctggatgaactcaatatggtcgcttatggggacgatgtgcttgctagttacccctttcccattgattgctcagaactagcaagaacgggtaaggagtatggtttgaccatgacccctgcagataagtctccttgcttcaatgaagttaattgggaaaatgcaacctttctcaagagaggtttcttgcctgatgaacaatttccatttttgattcatcccaccatgccgatgaaggagattcatgaatccattcggtggactaaggatgcacgcaatactcaagatcacgtgcgatccttgtgtctattggcgtggcacaacggtaagcaagaatatgaaaaatttgtgagtgcaattaggtctgtcccaataggaaaggcactggctattccaaattatgaaaacctgagacgcaattggctcgaattattct-----agaggttacat-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX752785.1_Coxsackievirus_A6_isolate_Weifang/SD/CHN/2014_complete_genome
-----------------------------------------------------aca-gggcccac-t-gggcgctagcactccgattctgcggaatctttgtgcgcct-g-ttttata-----atccc---t---tccc-c---a-aaact-gtaacttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccactgaaactgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgct-taccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-gaggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------aaattgttaccatatagctattggattggccacccag--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actttaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagttacggagagtggccagaatattgtccctccatggacgctacagctgtggacaaacctactcgccctgacgtgtcagtaaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagtggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgacgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattactaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaactttgtagtgccaccagacacccccactgaggctaatattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagtgtaccaaaatgatccc--------attacaaatgcagtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaataacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataatatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacaaccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcagggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcacacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaggctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggctaggacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggcttaaggagaaaattataccagcagctagagagaaggttgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagaccactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattgtgctctgaaaataacacagcaaactttaaacgctgcagcccactagtgtgtgggaaggccatccaattaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactgatcatgcaatccatcgccacggtcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggtgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagcctcgattttgccctatccctactgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggtgtcagggatcgcttagcagttctcccgcgccactcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttggtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaagttcattccagaaaacatcagcgctgctagtgacgccaccctagtgatcaatacagagcacatgccctcaatgtttgtacctgtgggagatgtcgtacaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtggtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaacgggccaactcgcaccaagctcgaacctagtgtgttccatgatgtctttgagggtaacaaggagccagcggtcttacatagtaaggaccctcgccttgaggtggacttcgagcaggcgttgttctctaagtatgtagggaacacactccatgaacctgatgagtatatcagagaagcagcccttcactatgcaaatcagttgaaacagctggacatagacaccacccagatgagcatggaggaggcttgttatgggacagacaatcttgaagccattgaccttcaaactagtgcaggttatccctacagtgctctgggaataaagaaaagagatattttagaccctaccaccagagacgtcagtaggatgaagttctacatggacaagtatggtcttgaccttccatattctacctatgtcaaagacgagcttcgctcgatagataagatcaagaaagggaagtctcgtctgattgaggccagcagtttgaatgactcggtctatctcagaatggctttcgggcacctctatgaaactttccatgcaaaccctgggacagtaactggctcggctgtggggtgtaacccagatgtgttttggagtaagctaccaattctgctccctggatccctctttgcctttgactattcaggctacgatgctagccttagcccagtttggtttagagcactggaattagtccttagagagataggttatagtgatgaggcagtctcgctcattgaaggaatcaaccacacgcaccatgtgtaccgtaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaactcaatgattaataacatcattatcagagcattacttattaaaacattcaagggcattgatctggatgaactcaacatggttgcctacggagacgatgtgctcgctagttacccctttccaattgactgcctagagctagcaaaaacaggtaaggagtacggtctaaccatgactcctgcagacaagtccccttgcttcaatgaagttaattgggaaaacgcaaccttcctcaagagaggcttcttgcctgatgagcaatttccgtttttgatccaccccaccatgccaatgaaggaaattcatgaatccattcggtggaccaaggatgcacgcaatactcaagatcacgtgcggtccctatgtctattggcgtggcataacggtaagcaagaatacgaaaaatttgtgaactcaattagatccgtcccagtaggaagagcattggcaatccccaattatgaaaatctgagacgtaattggctcgaattgtttt-----agaggttgaac-------------------------aaac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aa--------------------aaaaaaa----------------------------------------------------------------------------------------------------
>KP144343.1_Coxsackievirus_A6_isolate_V1/Gla/UK/2014_polyprotein_gene_partial_cds
--------------------------------------------------------------------------------------------------------------------------------------------------aaact-gcaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcaccagtcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-acccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctaatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccgg--tgactaacagagctttgata-----ttcttg----tttgta-ggttttgttccac-----tcacaaa--------------tcatacagttcat-actctgaagtatactctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgactg-aagggtccactattaactttaccaacatcaattattacaaggactcttatgcagcgtcggctagtagacaggattttgcacaagatcctgcaaagttcacacgtcctgtcttagacaccatcagggaggttgcagccccgttacaatccccctctgtcgaggcgtgtggttatagtgaccgagtcgcacagctgactgtgggcaactcaaccatcactacccaagaggcagccaatattgtattgagctacggggagtggccagaatactgcccttctacggacgctacagctgtggacaagcctacccgccctgacgtgtcagtgaataggttctatacactgtcaactaagagctggaagacag------------------aatctactggctggtattggaaattccctgacgtgctaaatgacacaggagttttcggtcaaaacgcccaattccattacttgtaccgctcgggtttctgtatgcacgtacagtgcaatgcaagcaaattccatcagggggccctcttagtggctgcaatccctgaattcgtggttgcggcaagtagccctgccacaaagcctaatgggcaagggttgtatccagatttcgctcatactaacccaggtaaaggtggtcaggagtttcgagatccctatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcagtggatcaatctacggactaataactgcgcaaccatcattatgccatatgtcaacgcgcttccatttgactcagcgcttaaccactcaaattttgggttggttgtgatccctattagtcctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggaatttagcggcctccgacaagcaataaaacaagggctccctacagagctcaaacctgggaccaatcaatttcttacgactgatgacgggacatccccaccaatattgcctggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttggatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accaccggtaccactggg------gtcagtagattactaatccctgttcgagcgcagaaca------atgtggaccagttgtgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatctacaatgattggtcagatctgtaggtattacactcagtggtctggttctcttaaggtgacctttatgttcacaggttcttttatggctacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaggcggcaatgcttgggacacatatagtgtgggattttggtttgcaatcatcagtcaccttggttataccttggattagtaacacccatttcagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccagaccaacttcgtagtaccaccagatacccccactgaggctaacattatagctcttggagcagcacagaagaactttaccctaaagttgtgtaaggacactgacgagatccaacaaacagcggaataccaaaatgacccc--------attacaaatgctgtgg---aaagtgccgtaagcgcgcttgc--------------tgacaccacaatatcccgagtg--------------------------------accgcagccagcactgcagtcagcacccactccctgggtacggggcgcgtaccagcattgcaagctgcagagacgggagcgagttctaatgctagtgatgagaaccttattgaaactcgctgtgtgatgaatcggaacggggtcaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggggttgtggaggtgaaggactcgggcactag----tctggatgggtacacagtttggcccatagacgtgatgggctttgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgctgagttcacttttgtgtccaacctcaatgatagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaaaccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtgtttgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcaccagcaacagcctatcagtggttttatgacggttaccctacatttggtgagcacaagcaggccgctaatttgcactatgggcagtgccctaacaacatgatgggccattttgccatccgaacagtcagtgaatctaccaccggaaagaacgtccacgttcgggtgtacatgaggattaagcacgtgagagcttgggtacctaggccccttcggtcccaagcgtatatggtcaagaattacccaacatatagccaaac----aattgctaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcgggataccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacaatctggtgctatctatgtgggtaactttagagtgataaaccgacatctcgctactcacaatgattgggcaaatttagtatgggaaagtagctcgcgagaccttctggtgtcctctactactgctcagggatgtgacaccattgcccgatgtgactgtcaaacaggagtgtattactgcaactctagaaggaaacattacccggttagtttttctaagcctagcctcgtctttgtggaagctagtgagtattatcctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacctggggactgtggcggcattcttaggtgccaacatggcgtgattggcatcgtgtccactggtggtggtgggcttgtcgggtttgcagatgtcagagaccttttgtggttggatgaagaagccatggagcagggtgtgtctgattatatcaaa-ggactcggtgacgcattcggaactggatttactgatgcagtgtctagggaagtggaagctcttaagacctaccttataggatctgaaggggctgttgagaagatcttgaagaatttgatcaaactgatctcggcactagtcatagtgatcagaagcgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggtagtccctgggcgtggatcaaggctaaaacggcatccgccttaggcattcctatcgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaacaagattagtaaatttattgattggctcaaggaaaaaattataccagcagctaaagagaaggtcgagtttttgagtaacctgaagcaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtctgccgcttcacaagaagaccttgaggcgatgtttgggaatgtatcgtatctcgctca---------cttttgccgtaaataccaaccgctttatgctacagaggccaaaagagtttatgctttagagaagaggatgaataattacatgcagttcaagagcaaacaccgtattgagccagtatgtcttatcatcagaggctccccaggcaccggaaagtctttggcaaccggtataatagcccgagcgatagctgacaaataccactctagtgtatactcacttccaccagatccggaccactttgatgggtacaaacagcaagtggtcacagttatggacgatctatgccagaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagat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>AB779616.1_Coxsackievirus_A6_genomic_RNA_complete_genome_strain:_Kyoto2
------------------ttaaaa--cag-gct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagtacactggttccacggaacctttgtgcgcct-g-ttttaca-----acccc---t---tccc-c---a-aactc-gtaacttagaaga------------ataacacgctatc-gatcaa-tagcaggcatggcgcgccagccatgtctaga-tcaagcacttctg-tctccccggaccgagtatcgatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtaacaccatcgaagctacagagcgtttcgctcagca--cta-cccca---gtgtagatcaggtcgatgagtcactgcg-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcctctgaatgcggctaatcctaactgcggagcgcatgccctcaaccca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgagtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatacagctattggattggccatccag--tgactaacagagctttgata-----tacctg----tttgtg-ggttttgttccac-----tcaccaa--------------ttgtacagttcat-actttgaagtacattttaatcctgaataatagaag-------atgggcgcccaagtttcgacacaaaagtctgggtcacacgagacaaggaatgtagcaactg-aggggtctaccatcaactttaccaatatcaattactataaggactcttacgcagcgtcggctagtagacaagactttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgccgctccgttacaatccccctctgtcgaggcgtgcggttatagcgaccgagtcgcacagctgaccgtgggcaactcaaccatcaccacccaagaggcagctaacattgtattgagctatggagagtggccagaatactgtccgtctacggacgctacagctgtggataagcctactcgccctgacgtgtcagtgaataggttctatacactgtcaactaagagctggaagacag------------------aatctactggctggtactggaagtttcctgatgtactaaatgacacaggagtttttggtcaaaacgcccaatttcactacctataccgctcgggtttctgcatgcacgttcaatgtaatgcaagcaaattccatcagggggcccttttagtagccgcaatccccgaattcgtgattgctgcaagcagccctgctacgaagcctaatgggcaagggttgtacccagattttgctcacactaacccaggcaaagatggtcaagagtttcgggatccttatgtcttggacgccggaatccccctaagtcaagcactggtttttccccatcaatggatcaacctacgaactaacaactgtgcaaccattattatgccatatgttaacgcacttccatttgactcggcgcttaaccactcaaattttggattggttgtgatccctattagccctttgaagtattgtaatggtgccactacagaggtgccaatcacattaactatagccccacttaattcggagttcagtggtctccggcaagcaataaaacaaggattccctacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccgccaatactgcctggttttgaaccaactccattgattcacattcctggtgagtttacctctttattagatttgtgtcaagtagagaccatactagaagtcaataa----------c------accaccagcaccactggg------gtcagcagattattaatccctgttcgagcgcagaata------atgtggaccagttatgtgcctcgttccaagtggatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtccggttctcttaaggtaaccttcatgtttacaggttcttttatggctacagggaaaatgctaatagcctacacaccacctggtagtgctcagcctgccacaagggaagcagcgatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagtcactttagtcataccctggattagtaacactcattttagggcggttaagactggaggggtatatgactattatgcgaccgggatcgtcaccatttggtaccagaccaacttcgtagtgccaccagacacccccaccgaggctaacatcatagctcttggagcagcacaaaagaactttaccctaaagttgtgcaaggacactgacgaaatccaacaaacagccaaataccaaaatgatcct--------attacaaatgcagtgg---aaagtgcagtaagcgcgctcgc--------------tgacactacaatatctcgggtg--------------------------------accgcagccaacactgcagttagcactcactccctgggtacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagctctaatgctagtgacgagaaccttattgagactcgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggaacacttttactcccgtgcagggctggtaggggttgtggaggtgaaggactcgggcactag----tctagatgggtatacagtgtggcctatagacgtgatgggttttgtacaacagcggcgcaagctagagctagcaacatacatgcgctttgatgctgagttcacttttgtgtccaatctcaatgatagcacaacgcccgggatgctgttacagtacatgtatgtgccaccaggggcccctaagccggatagtaggaaatcataccaatggcagaccgctaccaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtctccagcaacagcatatcagtggttttatgatggttatcctacattcggtgagcacaaacaagccactaatttgcattatgggcagtgtcctaataacatgatgggccatttcgccatccgaacagtcagtgaatctactaccgggaaaaacgtccacgttcgagtgtacatgagaattaaacacgtgagagcttgggtgcctaggcccctccgatcccaagcttacatggtcaagaattatccgacatacagtcaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacagattatgaaggtggggtaccagcaagtccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatttatgtgggcaactttagagtggtaaaccgacatctcgccactcacaatgactgggcaaatttggtgtgggaaagtagctcacgagatcttctggtgtcctccactactgcccaaggatgtgataccattgcccggtgtaattgtcagacaggggtgtattactgtaactctagaaggaaacactacccagtcagtttctctaagcctagtcttgtcttcgtggaagctagtgagtattatcctgccaggtatcagtcacatctcatgcttgcagaaggatattctgagcccggggactgtggtggcatccttaggtgccagcatggcgtgattggcattgtgtccactggtggtaatggacttgtcggatttgcagatgtcagggatcttttgtggttggatgaagaagccatggaacagggtgtatccgattacatcaaa-ggtctcggtgatgcattcggaactggtttcactgacgcagtgtctagggaggtggaagctcttaagaactaccttataggatctgaaggggccgttgagaagatcttgaagaatttgattaaattgatctcagcgctggtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttagcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatccattttaggtatccctatcgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatctccaataagattagtaaatttattgattggcttaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagacctcgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctctggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaacaggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtagtcacagttatggacgatctgtgccagaatcctgatggcaaggatatgtcactcttttgccagatggtatctactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatccaaatttgtcattgcatccaccaatgctagtaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacattgaggtaacggattcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaacaacacagcaaacttcaaacgctgcagtccactagtgtgtgggaaggccatccaattaagagataggaagtccaaggttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgctattggaaacacaattgaagcgttgtttcagggaccacccaagtttagacctattaggatt---agtcttgaggagatgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaggaggtgcgccaatattgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgcacggcaacggtgcagggacctagccttgattttgccctatccctgctgagaaggaacatcaggcaggttcagacagatcaagggcacttcactatgttgggcgtcagggatcgcttagcagttctcccgcgccattcgcagcccggaaaaacaatctgggtggaacacaaactcgtgaacatcctggatgctgtcgagttagtggatgagcaaggggtcaacctagagctcactctaatcactcttgataccaatgagaaattcagagatatcaccaaattcattccagaaaacatcagtgctgctagtgacgccaccctagtgattaatacagaacacatgccctcaatgtttgtacctgttggtgatgtcgtgcaatacggtttcctgaatctcagtggaaaacccacccaccgcaccatgatgtacaacttccctactaaggcaggacagtgtggaggagtagtgacatcagttggaaaggttattggaattcacataggaggcaatggtaggcaaggtttctgtgcgggacttaagaggagctactttgctagtgagcaaggagagatccaatgggtaaagcctaacaaagaaactgggagacttaacatcaatgggccaactcgcaccaaactcgaacctagtgtattctatgacatctttgagggcaacaaggaaccagcggtcttacacagcaaagactctcgcctcgaggtagattttgagcaggcattgttctctaagtatgtaggaaacacactacatgagcctgatgaatatatcaaggaggcagccctacattatgcaaatcagttgaagcagctaggtatagatacctctcaaatgagcatggaagaggcttgctacggtacagacaatcttgaggctattgaccttcacactagtgcaggctacccctacagcgccttggggatcaagaagagggacatcttagaccccaccaccagggatgtgagcaagatgaagttctacatggataagtatggtcttgacctcccttattctacctatgttaaggatgagctacgctcaatagataagatcaagaaggggaaatcccgcttaattgaagctagcagtttgaatgactcagtttacctcagaatggccttcggacatctctatgaaactttccatgcaaaccctgggactgtgactggttcggctgtgggatgtaacccagacgtgttttggagcaagttgccaatcttgctccctggttccctctttgctttcgactactcgggctatgatgctagccttagtccagtttggtttagagcactggagttagttcttagagagataggctacagtaacgaggcagtctcactcattgaagggatcaaccacacacaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcaggctgttcaggaacatccatcttcaactcaatgattaacaacatcatcattagatcattacttatcaaaacatttaagggtattgacctggatgaactcaacatggttgcttatggggacgatgtacttgctagttacccttttcccattgactgctcagaactagcaagaacgggtaaggagtatggtttgactatgacccctgcagataagtcttcttgcttcaatgaagttaattggaaaaatgcaacctttctcaagagaggtttcttgcctgatgaacaatttccatttttgattcaccctaccatgccgatgaaggagatctacgaatccattcggtggaccaaggacgcacgcaacactcaagatcacgtgcgatccttatgcctattggcgtggcataacggtaaacaagaatatgaaaattttgtgaacgcaattagatctgtcccagtaggaaaagcattggctatcccaaattatgaaaacctgagacgcaattggcttgaattgtttt-----agaggttaaat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT779411.1_Coxsackievirus_A6_isolate_Changchun097/CHN/2013_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccatccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-a---a-aactc-gtaacttagaaga------------atatcacaccacc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ccc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatcctg--tgacaaacagagctttgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-accctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtattggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctatggagagtggccagagtattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttttacactctgtcaactaagagttggaagacag------------------aatctactggctggtactggagattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgtcacgaagcctaatggacaagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggttttctcccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgccaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggtctccgacaagctataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcactaccggg------gtcagtagattattaatccccgttcgagcacagaaca------atgtggaccagttgtgcgcatcattccaagtagaccctgggcgcaatggtccatggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtgtgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaactttgtagtgccaccagatacccccactgaggctagtattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagtacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggtttcgtgcaacagcggcgcaagctggagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgacagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtgttcgcaaaattgagtgatccacccccccaggtatctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtgccagcaaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcagggatgtgataccattgcccgatgtgattgtcaagcaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgatcggtatcgtatccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggcttggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaggctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggccaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgccgccaagggatttgagtggatttccaataagattagtaaatttattgattggcttaaagagaaaattataccagcagctagggagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgcaca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagaccactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgacggcaaggacatgtcactcttttgccagatggtatccaccgtagattttatcccaccaatggcttctttagaagagaaaggggtttcattcacatctaaatttgttattgcatccactaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagcccactagtgtgtgggaaggccatccaattaagagataggaagtccaaagttaggtacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaagttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtgctaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaggaaacctgttcttcgcacagcaacagtgcagggtccaagccttgactttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctgggtgtcagagatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttagagctgactttaattacccttgacactaatgagaaattcagggatatcaccaaatttattccggaaagcatcagtggtgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtaccagtgggtgacgttgtgcagtatggcttcttgaatctcagtgggaaaccgactcaccgtactatgatgtataactttcctaccaaggcaggacaatgtgggggagtggtcacatcagttgggaaggttattggcattcacataggaggcaatggtaggcaggggttctgtgcggggctcaagagaagctactttgctagtgaacagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatggaccaactcgcaccaagttcgaacctagtgtgtttcatgacgtctttgagggtcacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctctaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagccctccactacgcaaatcaattaaaacagttaagcataaacacctctcagatgagcatggaggaggcttgctatggcacagaaaatcttgaggctattgaccttcacaccagtgcgggatacccctacagtgcgttaggaataaagaagagggatatcttagaccccactaccagagatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactccacctatgttaaggatgagcttcgctcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttaccttagaatggcctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagcaaactgccaatcctgcttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagcttggttcagagcattggaaatggtccttaaagagataggttatagtgaagaggcaatctcactcattgaagggatcaatcacacacaccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatctttaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaagttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgagcaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgtaatactcaagaacacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccagtagggaaagcattggcaattcccaattacgaaaatctgaggcgcaattggctcgaattatttt-----agaggttaaac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT779413.1_Coxsackievirus_A6_isolate_Changchun099/CHN/2013_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccagccaca-gggcccac-t-gggcgctagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---tccc-c---a-agact-gtaacttagaaga------------atatcacactacc-gatcaa-tagcaggcatggcgcgccagtcatgtcgaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggaaatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgacaaacagagcttcgata-----tacttg----ttcgtg-ggtttcgttccac-----tcaccag--------------tcgtacagttcat-actctaaagtacattctgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagctagtagacaggactttgcacaagatcccgcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatattgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatccactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacgagggttgtacccagatttcgctcacactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggatgctggtgtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcgaccattatcatgccatatgtcaatgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgacgggacatccccaccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accactggcaccaccggg------gtcagtagattattaatccccgttcgagcacagaaca------atgtggatcagttgtgcgcatcattccaagtggaccctgggcgcaatggcccgtggcaatccacaatggtcggtcagatctgcaggtattacactcaatggtcaggttcccttaaggtaacctttatgttcacgggttcttttatggccacagggaaaatgttgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggactcatatagtatgggattttggtttgcaatcatcggttaccctagttataccttggattagtaacacccattttagagcagttaagattggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaatatcatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccagcaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggta--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagcgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtgaaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaaccttaatgacagcacgacgcccgggatgctgctacagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtatctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggcgaacacaaacaagctaccaatttgcaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgaatctaccaccgggaagaacgtccacgttcgggtgtacatgaggattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaactacccgacatacagccaaac----aataactaacactgcaactgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcgaacccacaaaggacatctggt------------------------------------------aggtttggccaacagtccggggctatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcataatgattgggcaaatctagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgattgtcaaacaggagtgtattactgcaactctagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacattctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggctggatgaagaagctatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcattcggaactggttttactgatgcagtgtctagggaggtggaggctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttaattaaattgatctcagcattagtcatagtgattagaagtgattatgacatggtaaccctcacagcaaccttggcactcatagggtgtcatggcagcccctgggcgtggatcaaggccaagacagcatccatcttaggcatccctatcgcccagaagcagagtgcgtcatggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctagagagaaggtcgagtttttgaacaacctaaaacaactgcca-ttgttggagaaccaaatctcaaacctggagcagtccgccgcttcgcaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttctgccagatggtatccaccgtggattttatcccaccaatggcttctttagaagagaaaggggtctcattcacatctaaatttgttattgcatccactaatgctagcaatattatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggattgcgacatcgaggtaacggactcatataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagcccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtccgccattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggcgccagcaccagatgttattagtgatcttcttgctagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctgagtagggctgtgctaattatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctgttcttcgcacagcaacagtgcagggtccaagccttgactttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcactatgctgggtgtcagagatcgcttggctgtcctcccgcgacattctcaacctggaaagactatctgggtggagcataagcttgtgaatgttctagatgctgttgagctagtggacgaacaaggggttaacttagagctgactttaattacccttgacactaatgagaaattcagggatatcaccaaatttattccggaaagcatcagtggtgctagtgatgccaccctagtgatcaatacagaacacatgccctcaatgtttgtaccagtgggtgacgttgtgcagtatggcttcttgaatctcagtgggaaaccgactcaccgtactatgatgtataactttcctaccaaggctggacagtgtgggggagtggtcacatcagttgggaaggttattggcattcacataggaggcaatggtaggcaggggttttgtgcggggctcaagagaagctactttgctagtgaacagggagagatccaatgggttaaacccaacaaagaaacagggagacttaacatcaatggaccaactcgcaccaagttcgaacctagtgtgtttcatgacgtctttgagggtaacaaggaaccagcagttttgcataataaagaccctcgccttgaggtggatttcgagcaagcattgttctctaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagccctccactacgcaaatcaattaaaacagttaagcataaacacctctcagatgagcatggaggaggcttgctatggcacagaaaatcttgaggctattgaccttcacaccagtgcgggatacccctacagtgcgttaggaataaagaagagggatatcttagaccccactaccagagatgtgagtaagatgaagttctacatggataagtatggtcttgacctcccttactccacctatgttaaggatgagcttcgctcgatagacaagattaagaaagggaagtctcgtctgattgaagccagcagtttgaatgactcggtttaccttagaatggcctttggacacctctatgagactttccatgcaaatcctggaactgtgaccggctcagctgtggggtgcaacccagatgtgttttggagcaaactgccaatcgtgcttcctggttccctcttcgcttttgattactcaggttatgatgctagcctcagcccagcttggttcagagcattggaaatggtccttaaagagataggttatagtgaagaggcaatctcactcattgaagggatcaatcacacacgccatgtgtaccgcaacaaaacctattgcgtacttggtggaatgccctcaggttgctcaggaacatccatctttaattcgatgattaacaacatcatcattagagcgttgcttattaaaacattcaagggtattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcgaaaacaggtagggagtatggtttaactatgactcctgcagataagtccccttgcttcaatgaagttaattgggaaaacgcaaccttccttaagagaggctttttgcctgatgagcaattcccgtttttgattcatcccaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgtaatactcaagaacacgtgcgatccttatgcctgttggcgtggcacaacggcaaacaagagtatgaaaaatttgtgagcacaattagatctgtcccagtagggaaagcattggcaattcccaattacgaaaatctgaggcgcaattggctcgaattatttt-----agaggttaaac-------------------------atac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289393.1_Coxsackievirus_A6_isolate_CV-A6/P874/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctatggaatctttgtgcgcct-g-ttttata-----acccc---t---t-cc-c---a-aaact-gtaacttagaaga------------atagcactctatc-gatcaa-taagaggcatggtgcgccaatcatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtaacaccattgaagccgcagagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggtgaccgtggcagtgactgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----ttcgtg-ggttttgttccac-----tcaccaa--------------tcgtacagtccac-actctaaagtatattttgattctgaacaatagaaa-------atgggtgcccaagtctcaacggaaaaatctgggtcgcacgagacaaagaacgtagcgactg-aagggtctactatcaactttaccaacatcaattactataaggactcttatgcagcatcagccagtagacaggattttgcacaagatcctgcaaaattcacacgtcctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagctaacattgtattgagctacggagaatggccagaatactgtccttctacggacgctacagctgtggataagcctactcgccctgacgtgtcggtgaataggttctacacactatcaaccaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtactgaatgacacaggagttttcggtcaaaacgcccaattccactacctgtaccgctcaggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaaggattatacccagattttgctcacactaacccgggtaaaaatggtcaagaattccgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcaaccattattatgccatatgtcaatgcacttccatttgattcagcgcttaaccactcaaactttggattggttgtgattcctattagccctttaaaatattgtaatggagctaccacagaagtgccaatcacactaaccattgccccactcaactcggagtttagcggcctccgacaagcaataaaacaagggtttcccacagagcttaagcctgggactaatcaattccttacaactgatgacgggacatccccgccaatactacctggttttgaaccaactccattgattcacattcctggcgagtttacctctttgttagacttgtgtcaaatagagaccatactagaagtcaataa----------c------accaccggcaccaccggg------gtcagtagattactaatccccgttcgagcgcagaaca------atgtggaccagttgtgtgcatcattccaagtggatcctgggcgtaatggtccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggctctttcatggccacagggaaaatgctgatagcctatacaccacctggtagtgctcagcccgctacaagggaagcggcaatgcttgggacgcacatagtgtgggattttggtttgcaatcatcagtcactttagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaatttcgtggtgccaccagacacccccactgaggctaacattatagctcttggagcggcacagaagaactttaccttaaagttgtgcaaagacactgacgagatccaacaaacagcagagtaccaaaatgacccc--------attgcaaatgcagtgg---aaagtgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaatactgcagttagtacccactccctgggcacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacgggattaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgacgccgagttcacttttgtgtccaacctcagtgatagcacaacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcgatatttgcaaaattgagtgatccacccccccaggtgtctgttccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccccacattcggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaactgtcagtgaatctaccaccgggaaaaacatccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactttagagtggtaaaccgacatctcgccactcataatgattgggcaaatttagtatgggaaagtagctcacgagaccttctggtgtcctccactactgctcaaggatgtgacaccattgcccgatgtgactgtcaaacaggagtgtattactgcaactctagaatgaaacactacccagtcagtttttctaagcttaggctcgtctttgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcgaagggacactctgaacccggggactgtggtggcattcttaggtgccaacatggcgtgattggtattgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagaccttttgtggctggatgaagaagccatggagcagggtgtgtcagactatatcaaa-gggctcggtgatgcattcggaactggttttactgatgcagtgtctagggaagtggaagctctcaagaactaccttataggatctgaaggggctgttgagaagatcttgaagaatttgattaaattgatctcggcactagtcatagtgatcagaagtgattatgatatggtaaccctcacagcaaccctagcactcatagggtgtcatggcagtccctgggcatggattaaggctaagacagcatccatcttaggtatccctattgcccagaagcagagtgcatcatggctcaagaagtttaacgacatggccaatgccgccaagggatttgagtggatttccaataaaattagtaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaagtttcaaacttggaacaatccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccgggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaataccactctagcgtgtattcacttccgccagatccagatcactttgatggttacaaacagcaagtagtcacagttatggacgatctatgtcagaatcctgatggcaaggatatgtcactcttttgccagatggtatctactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatccaaatttgtcattgcgtccaccaatgccagcaatatcatagtgccaacagtgtctgactctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcatataaaacagatttgggtaggttggatgctggaagagctgccaaattatgctctgaaaacaatacagcaaacttcaaacgctgcagtccattagtgtgtgggaaagccatccaactaagagacaggaagtccaaagtcagatatagtgtggatacggtggtttcagagctcataagggaatataataacaggtctgccatcggaaacacaattgaagccctgttccaggggccgcccaagtttagaccaattaggatc---agccttgaagagaaaccagccccagatgctattagcgaccttcttgccagcgtggatagcgaagaggtacgccagtactgc-agagaccaaggctggatcatcccagagactcccacaaatgttgaacgacacctcaacagagctgtgctgatcatgcaatccatcgccacagtagtagcagtagtctctttggtgtatgttatctacaagcttcttgctggatttcagggtgcttactctggtgctcctaagcaggcgctcaagaaacctattctccgcacggcaacagtgcagggcccaagtctcgactttgctttatcactgctaagaaggaatattaggcaagtccaaacagaccaagggcactttaccatgttgggagtcagagatcgcttagctgtccttccgcgacactcacaacctggaaagacaatctggatagagcacaagcttgtgaacgttctggatgctgtcgaactagtggatgagcagggggtcaatttggagctaaccctagtcaccctagacaccaatgagaagttcagagatattaccaaattcattccagaaagtatcagcgccgctagtgacgccactttagtgatcaacacagagcatatgccttcaatgtttgtgccagtaggtgacgttgtgcagtatggttttctaaatctcagcggaaagccaacccaccgcactatgatgtacaactttcccactaaggcaggtcagtgtggaggagtagtcacatcagttgggaaagtcattggcattcacataggaggtaatggcaggcaaggtttctgtgcgggactcaagaggagctatttcgctagtgaacaaggagagatccaatgggtcaagcctaataaagaaacagggaggctaaacatcaatgggccaacccgcactaaactcgagcccagtgtgttccatgacgtctttaagggcaacaaagagccagcagtcttacacagtaaagacccccgcctcgaggtggactttgagcaggcgttgttctctaagtacgtgggaaacacactacatgaacctgatgagtacgtcagagaggcagccctccactatgcgaatcagttgaagcagctagacatagacaccacccagatgagcatggaggaagcgtgctacggcacggataaccttgaggccattgacctccacactagcgcaggttacccctatagtgctctgggtataaaaaagagagatatcctagaccctaccactagagacgtgagcaagatgaaattctacatggataagtatggccttgacctcccttactccacctatgtcaaagatgagctccgctcgatagataagatcaagaaagggaaatctcgattgattgaagccagcagcttgaacgactcagtctacctcagaatggtctttgggcacctctatgaaacctttcatgcaaaccctggaactgtgactggttcagctgtagggtgtaacccagatgtattttggagcaagctaccaatcttgctccctggttccctctttgcctttgactactcaggctatgatgctagtctcagcccagtttggttcagggcactggagctagtcctcagggagataggctatagtgaggaggcggtttcgcttattgaaggaattaatcacacacaccatgtgtaccgcaacaagacttattgcgtgcttggtgggatgccctcgggttgctcaggaacatccatctttaactcaatgattaataacatcatcatcagaacactccttattaagacattcaagggtattgatttggatgaactcaacatggttgcctacggggatgatgtgctcgccagttatccttttccaattgactgcctagaactagcaagaacaggtaaggagtatggtctaaccatgactcctgctgataagtccccttgcttcaatgaggttaattgggaaaatgcaacctatttcaagaggggtttcttgcccgatgatcagttcccattcttgatccaccctaccatgccaatgaaggaaatgcatgaatctattcgatggactaaggacgcccgcaatactcaagatcacgtgcgatccttgtgtctattgtcatggtacaacgggaaagcagagtacgaagaatttgtgagcacaattaggtctgtcctagtaggaaaagcattggcaatcccaagtgatgaaatcttgatacgcaattcgctcgaaatatttt-----agaggttagac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LC126143.1_Coxsackievirus_A6_genomic_RNA_complete_genome_strain:_Hyogo1278
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctacggaacctttgtgcgcct-g-ttttacg-----acccc---t---tccc-c-----aaactcgcaacttagaaga------------atagcacgctact-gatcaa-tagcaggcatggcgcgccagccatgtctaga-tcaagcacttctg-tctccccggaccgagtatcgatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtaacaccattgaagctgcagagcgtttcgctcaaca--cta-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgactaacagagctttgata-----tacctg----tttgtg-ggttttgttccac-----tcaccaa--------------ttgtacagttcat-actttgaagtacattttaatcctgaataatagaaa-------atgggcgcccaagtttcaacacaaaaatctgggtcgcacgagacaaggaatgtagcaactg-aagggtctaccatcaacttcaccaatatcaattactataaggactcttacgcagcgtcggccagtagacaggactttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgccgctccgttacaatccccctctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgaccgtgggcaactcaaccatcaccacccaagaggcagctaacattgtattgagctatggagagtggccagaatactgtccttctacggacgctacagctgtggataagcctactcgccctgacgtgtcagtgaataggttctatacactgtcaaccaagagctggaagacag------------------aatctactggctggtactggaagttccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaatttcactacctgtaccgctcgggtttctgcatgcacgttcaatgtaatgcaagcaaattccaccagggggccctcttagtagccgcaatccccgaattcgtgattgctgcaagcagccctgctacgaagcctaacgggcaagggttgtacccagattttgctcataccaacccaggtaaagatggtcaagagtttcgggatccttatgtcttggacgctggaatccctctaagtcaagcactggttttcccccatcaatggatcaacctacggactaataactgtgcaaccattattatgccatatgttaacgcgcttccatttgactcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttgaaatattgtaatggagctaccacagaggtgccaatcacactaactatagccccacttaattcggagttcagcggcctccgacaagcaataaaacaagggttccctacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccgccaatactacctggttttgaaccaactccattgattcacattcctggtgagttcacctctttattagatttgtgtcaagtagagaccatactagaagtcaataa----------t------accaccggcaccactggg------gtcaccagattactaatccctgttcgagcacagaata------atgtggaccagttatgtgcctcgttccaagtggatcctgggcgcaatggcccgtggcaatccacaatggttggccagatctgtaggtattacactcaatggtctggttctcttaaggtaaccttcatgtttacaggctcttttatggctacagggaaaatgctaatagcctacacaccacctggtagtgctcagcctgctacaagggaagcagcgatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagtcactttagtcataccctggattagtaacacccattttagggcggttaagactggaggggtatacgactactacgcgaccgggatcgtcaccatttggtaccagaccaacttcgtagtaccaccagatacccccaccgaagctaacatcatagctcttggagcagcacaaaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagccgaataccaaaatgatcct--------attacaaatgcagtgg---aaagtgctgtgagcgcgctcgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggtacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagttctaatgctagtgacgagaaccttattgagactcgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggaacacttttactcccgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctagatgggtatacagtgtggcctatagacgtgatgggttttgtgcaacagcggcgcaaactagagctatcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgatagcacgacgcccggaatgctgttgcagtatatgtatgtgccaccaggggcccctaagccggatagtaggaaatcataccaatggcagactgctactaacccgtcggtgtttgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtctccagcaacagcttatcagtggttttatgatggttaccctacattcggtgagcacaaacaagccactaatttacaatatgggcagtgccctaataacatgatgggccattttgccatccgaacagtcagtgagtctactaccgggaaaaacgtccacgttcgggtgtacatgagaattaaacacgtgagagcttgggtgcctaggcccctccggtcccaagcttacatggtcaagaattatccgacatatagccaaac----gataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggtggggtaccagcaagcccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctgtctatgtgggtaactttagagtggtaaaccgacatctcgccactcacaatgactgggcaaatttggtatgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgataccattgcccggtgtaattgtcaaacaggagtgtattactgcaactctagaaggaagcactacccagtcagtttttctaaacctagccttgtcttcgtggaagctagtgagtactatcctgccaggtaccagtcacacctcatgcttgcagaaggatattctgagcccggggactgtggtggcatccttaggtgccagcatggcgtgattggtatcgtgtccaccggcggtaatggacttgtcggattcgcagatgtcagagatcttttgtggttggatgaagaagccatggaacagggtgtatctgattacatcaaa-gggctcggtgatgcattcggaactggttttactgacgcagtgtctagggaagtggaggctcttaagaactaccttataggatctgaaggggccgttgagaagatcttgaagaatttgattaaattgatctcagcgttagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttagcactcataggatgtcatagtagtccctgggcgtggatcaaggctaagacagcatccattttaggtatccctatcgcccagaaacagagcgcatcgtggctcaagaagtttaatgacatggccaacgctgccaaaggatttgagtggatttccaataagatcagcaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagatcttgaggcaatgtttgggaatgtgtcgtatctcgcaca---------cttctgccgtaaataccaaccactttacgccacagaagccaaaagagtctatgttctggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttattatcagaggttccccaggtactggaaagtccttagcaaccggcattattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagacccagatcactttgatggttacaaacagcaagtggtcacagtcatggatgatttatgccagaatcctgatggtaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttccttagaggagaaaggagtttcattcacatctaaatttgtcattgcatccactaacaccagtaacatcattgtaccaacagtgtccgactcagatgctatacgccgcaggttctatatggactgcgacatcgaggttacagattcatacaaaacagatctcggtagattggatgctgggcgggccgctaaactgtgctcagaaaacaacacagcgaactttaaacgatgcagcccactggtgtgcgggaaagctatccagctgagggatagaaaatctaaagttaggtatagtgtggacactgtggtttctgaactcataagagaatacaacaacaggtccgccattggaaacacaattgaagctttgttccagggcccacccaaatttagacccataaggatc---agccttgaggagaaaccagcccctgacgccattagcgatcttctcgccagtgtggacagcgaagaggtacgccagtactgt-agagaccaaggttggatcatcccagaaactcctacaaatgttgagcgacacctcaacagggctgtgttggtcatgcaatccatcgccacagtggtagcagttgtctcattggtgtatgtcatctacaagttattcgctgggttccagggtgcatactctggcgctcccaagcaggtacttaatagaccaactctccgcacagcaacagtgcagggtccaagcctcgactttgctctatcgctactgaggaggaatatcaggcaggtccagacagatcaagggcacttcaccatgctgggtgtcagagaccgcttggctgtccttccacgacactcacaacccggaaagacgatctgggtagagcacaagctggtgagcgttctagacgctgtcgaactagtggatgaacaaggggtcaatttagaactgaccttaatcaccctcgataccaatgagaaattcagagacattactaggtttattccagaaaacatcagtgctgctagtgatgctactttagtgattaacacagaacacatgccctcaatgtttgtgccagtaggtgatgttgtgcagtacggttttttaaatcttagtggaaagccgactcaccgcactatgatgtataacttccccactaaggcaggacagtgtggaggggtggtgacatcagttggaaaggttattggaatccatataggaggtaacggcaggcaaggtttctgtgcaggactcaagaggagttactttgctagtgaacaaggagagatccaatgggttaaacctaacaaggaaactggaagacttaacatcaatggcccaactcacaccaaactcgaacctagcgtgttttatgatgtcttcgagggcagtaaggagccagcagtcctacacagcaaagacccccgcctcgaggtggatttcgagcaagcattgttctccaagtacgtggggaacacactgcgcgagcctgatgagtacatcagagaggcagccctccactatgcaaatcagttaaaacagctagatatagacacctctcaaatgagcatggaggaggcttgttacggcacagataaccttgaagctattgacctccatactagcgcaggttacccctacagtgccctgggaataaagaagagggatattttagaccccactaccagagatgtgagcaagatgaaattttacatggacaagtatggccttgaccttccttattccacttatgtcaaagatgagcttcgctcgatagataagatcaagaaagggaaatcccgtttgattgaggctagtagcttgaacgattcagtctatctcagaatggcgtttggacacctctatgaaaccttccatgcaaatcctggaaccgtgactggctcagctgtggggtgcaacccagatgtgttttggagcaaactaccaatcctgctccctggctccctctttgcctttgattattcgggctatgacgctagccttagcccggtttggtttagagcactagagatagtccttagagagataggctatagtgaggaggttgtctcacttattgaaggaatcaatcatacacatcatgtataccgcaataaaacctattgtgtgcttggtgggatgccctcgggctgttcagggacgtccattttcaactcaatgatcaataacattatcatcagagcattacttatcaaaacatttaagggtattgacttggatgaactcaacatggttgcctacggggacgatgtgcttgctagttacccttttccaatcgactgtctagaactagcaagaacaggcaaggagtatggtttgaccatgactcctgcagacaagtccccttgctttaatgaagttaattgggaaaacgcaacctttctcaagagaggtttcttgcctgatgagcaatttccatttttgattcatcctaccatgccaatgaaggagatccacgaatctattcggtggaccaaggatgcacgcaacactcaagatcacgtgcgatccctatgcctattggcgtggcacaacggcaagcaagaatatgaaaattttgtgagcacaattagatctgtcccagtaggaaaagcattggctatcccaaattatgaaaatctgagacgtaattggctcgaattgtttt-----agaggttaaat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB779614.1_Coxsackievirus_A6_genomic_RNA_complete_genome_strain:_Kyoto1
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctacggaacctttgtgcgcct-g-ttttaca-----acccc---t---tccc-c-----aaactcgcaacttagaaga------------atagcacgctatc-gatcaa-tagcaggcatggcgcgccagccatgtctaga-tcaagcacttctg-tctccccggaccgagtatcgatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtaacaccattgaagctgcggagcgtttcgctcaaca--cta-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgactaacagagctttgata-----tacttg----tttgtg-ggttttgttccac-----tcaccaa--------------ttgtacagttcat-actttgaagtacattttaatcctgaataatagaaa-------atgggcgcccaagtttcaacacaaaaatctgggtcgcacgagacaaggaatgtagcaactg-aagggtctaccatcaacttcaccaatatcaattactataaagactcttacgcagcgtcggctagtagacaggactttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgccgctccgttacaatccccctctgttgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccatcaccacccaagaggcagctaacattgtattgagctatggagagtggccagaatactgtccttctacggacgctacagctgtggataagcctactcgccctgacgtgtcagtgaataggttctatacactgtcaactaagagctggaagacag------------------aatctactggctggtactggaagttccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaatttcactacctgtaccgctcgggtttctgcatgcacgttcaatgtaatgcaagcaaattccatcagggggccctcttagtagccgcaatccccgaattcgtgattgctgcaagcagtcctgctacgaagcctaacgggcaagggttgtacccagattttgctcatactaacccaggtaaagatggtcaagagtttcgggatccttatgtcttggacgctggaatccctctaagtcaagcactggttttcccccatcaatggatcaacctacggactaacaactgtgcaaccattattatgccatatgttaacgcgcttccattcgactcagcgctcaaccactcaaattttggattggttgtgatccctattagccctttgaaatattgtaatggagccaccacagaggtgccaatcacactaactatagccccacttaattcggagttcagcggcctccgacaagcaataaaacaagggttccctacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccaccaatactacctggttttgaaccaactccattgattcacattcctggtgagttcacctctttattagatttgtgtcaagtagagaccatactagaagtcaataa----------t------accaccggcaccactggg------gtcaccagattactaatccctgttcgagcacagaata------atgtggaccagttatgtgcctcgttccaagtggatcctgggcgcaatggcccgtggcagtccacaatggttggccagatctgcaggtattacactcaatggtctggctctcttaaggtaacctttatgtttacaggttcttttatggctacagggaaaatgctaatagcctacacaccacctggtagtgctcagcctgctacaagggaagcagcgatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagtcactttagtcataccctggattagtaacacccattttagggcggttaagactggaggggtatacgactactacgcgaccgggatcgtcaccatttggtaccagaccaacttcgtagtaccaccagatacccccaccgaagctaacatcatagctcttggagcagcacaaaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagccgcataccaaaatgatcct--------attacaaatgcagtgg---aaagtgctgtaagcgcgctcgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggtacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagttctaatgctagtgacgagaaccttattgagactcgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggaacacttttactcccgtgcagggctggttggagttgtggaggtgaaggactcgggcactag----cctagatgggtatacagtgtggcctatagacgtgatgggttttgtgcaacagcggcgcaaactagagctatcaacatacatgcgctttgatgccgaattcacttttgtgtccaacctcaataatagcacgacgcccggaatgctgttgcagtatatgtatgtgccaccaggggcccctaagccggatagtaggaaatcataccaatggcagactgctaccaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtctccagcaacagcttatcagtggttttatgatggttatcctacattcggcgagcacaaacaagccactaatttacaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgagtctactaccgggaaaaacgtccacgttcgggtgtacatgagaattaaacacgtgagagcttgggtgcctaggcccctccggtcccaagcttacatggtcaagaattatccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggtggggtaccagcaagcccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctgtctatgtgggtaactttagagtggtaaaccgacatctcgccactcacaatgactgggcaaatttggtatgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgataccattgcccggtgtaattgtcaaacaggagtgtattactgcaactctagaaggaagcactacccagtcagtttttctaaacctagccttgtcttcgtggaagctagtgagtactatcctgccaggtatcagtcacacctcatgcttgcaaaaggatattctgagcccggggactgtggtggcatccttaggtgccagcatggcgtgattggtatcgtgtccactggtggtaatggacttgtcggattcgcagatgtcagagatcttttgtggttggatgaagaagctatggaacagggtgtatctgattacattaaa-gggctcggtgatgcattcggaactggttttactgacgcagtgtctagggaagtggaggctcttaagaactaccttataggatctgaaggggccgttgagaagatcttgaagaatttgattaaattgatctcagcgctagtcatagtgatcagaagtgattatgacatggtaaccctcacagcaaccttagcactcataggatgtcatggcagcccctgggcgtggatcaaggctaagacagcatccattttaggtatccctatcgcccagaaacagagcgcatcgtggctcaagaagtttaatgacatggccaacgctgccaagggatttgagtggatttccaataagatcagtaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagatcttgaggcaatgtttgggaatgtgtcgtatctcgcaca---------cttctgccgtaaataccaaccactttacgccacagaagccaaaagagtctatgttctggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttattatcagaggttccccaggtactggaaagtccttggcaaccggcattattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagacccaaatcactttgatggttacaaacagcaagtggttacagtcatggatgatttatgccagaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttccttagaggagaaaggagtttcattcacatctaagtttgttattgcatccactaacaccagtaacatcattgtgccgacagtgtccgactcagacgctatacgccgcaggttctatatggactgcgacatcgaggtcacagattcatacaaaacagatctcggtagattggatgctgggcgggccgctaaactgtgctcagaaaacaacacagcgaactttaaacgatgcagcccactggtgtgcgggaaagccatccagctgagggatagaaaatctaaagttaggtatagtgtggacactgtggtttctgaactcataagagaatacaacaacaggtccgccattggaaacacaatcgaagctttgttccagggcccacccaaatttagacccataaggatc---agccttgaggagaaaccagcccctgacgccattagtgatcttctcgccagtgtggacagcgaagaggtacgtcagtactgt-agagaccaaggttggatcatcccagaaacccctacaaatgttgaacgacacctcaacagggctgtgttggtcatgcaatccatcgccacagtggtagcagttgtctcattggtgtatgtcatctacaagttattcgctgggttccagggtgcatactctggcgctcccaagcaggtacttaatagaccaattctccgcacagcaacagtgcagggtccaagcctcgactttgctctatcgctactgaggaggaacatcaggcaagtccagacagatcaagggcacttcaccatgctgggtgtcagagaccgcttggctgtccttccacgacactcacaacccggaaagacgatctgggtagagcacaagctggtgagcgttctagacgctgtcgaactagtggatgaacaaggggtcaatttagaactgaccttaatcaccctcgataccaatgagaaattcagagacattactaagtttattccagaaaacatcagtgctgctagtgatgctacattagtgattaacacagaacacatgccctcaatgtttgtgccagtaggtgatgttgtgcagtacggttttttaaatcttagtggaaagccgactcaccgcaccatgatgtataacttccccactaaggcaggacagtgtggaggggtggtgacatcagttggaaaggttattggaatccatataggaggtaacggcaggcaaggtttctgtgcaggactcaagaggagttacttcgctagcgaacaaggagagatccaatgggttaaacctaacaaggaaactggaagacttaacatcaatggcccaactcacaccaaactcgaacctagcgtgttttatgatgtcttcgagggcagtaaggagccagcagtcctacacagcaaagacccccgccttgaggtggatttcgagcaagcattgttctccaagtacgtggggaacacactgtgcgagcctgatgagtacatcagagaggcagccctccactatgcaaatcagttaaaacagctagatatagacacctctcaaatgagcatggaggaggcttgttacggcacagataaccttgaagctattgacctccatactagtgcaggttacccctacagtgccctgggaataaagaagagggacattttagaccccactaccagagatgtgagcaagatgaaattttacatggacaagtatggccttgaccttccttattccacttatgtcaaagatgagcttcgctcgatagaaaagatcaagaaagggaaatcccgtttgattgaggctagtagcttgaatgattcagtctatctcagaatggcgtttggacacctctatgaaaccttccatgcaaatcctggaaccgtgactggctcagctgtggggtgcaacccagatgtgttttggagcaaactaccaatcctgctccctggctctctctttgcctttgattattcgggctatgacgctagcctcagcccggtttggtttagagcactagagatagtccttagagagataggctatagtgaggagactgtctcacttattgaaggaatcaatcatacacatcatgtataccgcaataaaacctattgtgtgcttggtgggatgccctcgggctgttcagggacgtccattttcaactcaatgatcaataacattatcatcagagcattacttatcaaaacatttaagggtattgacttggatgaactcaacatggtcgcctacggggacgatgtgcttgctagttacccttttccaatcgactgtctagaactagcaagaacaggcaaggagtatggtttgaccatgactcctgcagacaagtccccttgctttaatgaagttaattgggaaaatgcaacctttctcaagagaggtttcttgcctgatgagcaatttccatttttgattcatcctaccatgccaatgaaggagatccacgaatccattcggtggaccaaggatgcacgcaacactcaagatcacgtgcgatccctatgcctattggcgtggcacaacggcaagcaagaatatgaaaattttgtgagcacaattaggtctgtcccagtaggaaaagcattggctatcccaaattatgaaaacctgagacgtaattggctcgaattgtttt-----aggggttaaac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LC126145.1_Coxsackievirus_A6_genomic_RNA_complete_genome_strain:_Hyogo1284
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctacggaacctttgtgcgcct-g-ttttaca-----acccc---t---tccc-c-----aaactcgcaacttagaaga------------atagcacgctatc-gatcaa-tagcaggcatggcgcgccagccatgtctaga-tcaagcacttctg-tctccccggaccgagtatcgatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtaacaccattgaagctgcagagcgtttcgctcagca--cta-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaccca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgactaacagagctttgata-----tacctg----tttgtg-ggttttgttccac-----tcaccaa--------------ttgtacagttcat-actttgaagttcattttaatcctgaacaatagaaa-------atgggcgcccaagtttcaacacaaaaatccgggtcgcacgagacaaggaatgtagcaaccg-aagggtctaccatcaacttcaccaatatcaattactataaggactcttacgcagcgtcggctagtagacaggactttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgccgctccgttacaatccccctctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgaccgtgggcaactcaaccatcaccacccaagaggcagctaacattgtattgagctatggagagtggccagaatactgtccttctacggacgctacagctgtggataagcctactcgccctgacgtgtcagtgaataggttctatacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaagttccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaatttcactacctgtaccgctcgggtttctgtatgcacgttcaatgtaatgcaagcaaatttcatcagggggccctcttagtagccgcaatccccgaattcgtgattgctgcaagcagccctgctacgaagcctaacgggcaagggttgtacccagattttgctcatactaacccaggtaaagatggtcaagagtttcgggatccctatgtcttggacgctggaatccccttaagtcaagcactggttttcccccatcaatggatcaacctacgaactaacaactgtgcaaccatcattatgccatatgttaacgcgcttccatttgactcagcgcttaaccactcaaattttggattggttgtgatcccaattagccctttgaaatattgtaatggagccaccacagaggtgccaatcacactaactatagccccactcaattccgagttcagcggcctccgacaagcaataaaacaagggctccctacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccgccaatactacctggttttgaaccaactccattgattcacattcctggtgagttcacctctttattagatttgtgtcaagtagagaccatactagaagtcaataa----------t------accaccggcaccactggg------gtcagcagattactaatccctgttcgagcgcagaata------atgtggaccagttatgtgcctcgttccaagtggatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttctcttaaggtaaccttcatgtttacaggttcttttatggctacagggaaaatgctaatagcctacacaccacctggtagtgctcagcctgctacaagggaagcagcgatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagtcactttagtcataccctggattagtaacacccattttagggcggttaagactggaggggtatacgactactacgcgaccgggatcgtcaccatttggtaccagaccaacttcgtagtacctccggacacccccaccgaggctaacatcatagctcttggagcagcacaaaagaactttaccctaaagttgtgcaaagacactgacgagatccaacaaacagccgaataccaaaatgatcct--------attacaaatgcagtgg---aaagtgctgtaagcgcactcgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccattccctgggtacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagttctaatgctagtgacgagaaccttattgagactcgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctagatgggtatacagtgtggcctatagacgtgatgggttttgtgcaacagcggcgcaaactagagctatcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgatagcacgacgcctggaatgctgttgcagtatatgtatgtgccaccaggggcccctaagccggatagtaggaaatcataccaatggcagaccgctaccaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtctccagcaacagcttatcagtggttctatgatggttaccctacattcggtgagcacaaacaagccactaatttacaatatgggcagtgtcctaataacatgatgggccattttgccatccgaacagtcagtgagtctactaccgggaaaaacgtccatgttcgggtgtacatgagaattaaacacgtgagagcttgggtgcctaggcccctccggtcccaagcttacatggtcaagaattatccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggtggggtactagcaagcccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctgtctatgtgggtaactttagagtggtgaaccgacatctcgccactcacaatgactgggcaaatttggtatgggaaagtagctcacgagatcttctagtgtcctccactactgctcaaggatgtgataccattgcccggtgtaactgccacacaggagtgtattactgcaactctagaaggaagcactacccagtcagtttctctaagcctagccttgtcttcgtggaagctagtgagtattatcctgccaggtatcagtcacacctcatgcttgcagaaggatattctgagcccggggactgtggtggcatccttaggtgccagcatggcgtgattggtatcgtgtctaccggtggtaatggacttgtcggatttgcagatgtcagagatcttttgtggttggatgaagaagccatggaacagggtgtatctgattacatcaga-gggctcggtgatgcattcggaactggttttactgacgcagtgtctagggaagtggaggctcttaaaaactaccttataggatctgaaggggccgttgagaagatcttgaagaatttgattaagttgatctcagcgctagtcatagtgatcagaagtgattatgacatggtgaccctcacagcaaccttagcactcataggatgtcatggtagtccctgggcgtggatcaaggctaagacagcatccattttaggtatccctatcgcccagaagcagagcgcatcgtggctcaagaagtttaatgacatggccaacgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttattggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagatcttgaggcaatgtttgggaatgtgtcgtatctcgcaca---------cttctgccgtaaataccaaccactttacgccacagaggccaaaagagtctatgctctggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcagaggttccccaggtactggaaagtccttggcaaccggcattattgcccgagcaatagctgacaaatatcactctagtgtatactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggatgatttatgccagaatcctgatggcaaggacatgtcactcttttgtcagatggtatccactgtagattttatcccaccaatggcttccttagaggaaaaaggagtttcattcacatctaaatttgtcattgcatccactaacgccagtaacatcattgtgccgacagtgtccgactcagatgctatacgccgcaggttctatatggactgcgacatcgaggtcacagattcatataaaacagatctcggtagattggatgctgggcgggccgccaaactgtgctcagaaaacaacacagcaaactttaaacgatgcagcccactggtgtgcgggaaagctatccagctgagggatagaaaatctaaagttaggtatagtgtggacactgtggtttctgaactcataagagaatacaacaacaggtccgccattggaaacacaattgaagctctgttccagggcccacccaaatttagacccataaggatc---agccttgaggagaaaccagctcctgacgccattagtgatcttctcgccagtgtggacagcgaagaggtacgtcagtactgt-agagaccaaggttggatcatcccagaaactcctacagatgttgaacggcacctcaacagggctgtgttggtcatgcaatccatcgccacagtggtagcagttgtctcattggtgtatgtcatctacaagttattcgctgggttccagggtgcatactctggcgcccccaagcaggtacttaagagaccagttctccgcacagcaacagtgcagggtccaagcctcgactttgccctatcgctactaagaaggaatatcaggcaggtccagacagatcaagggcacttcaccatgctgggtgttagagaccgcttggctgtccttccacgacactcacaacccggaaagacgatctgggtagagcacaagctggtgagcgttctagacgctgtcgaactagtggatgaacaaggggtcaatttagaactgaccttaatcaccctcgattccaatgagaaattcagagacattactaagtttattccagaaaacatcagtgctgctagtgatgctactttagtgattaacacagaacacatgccctcaatgtttgtgccagtaggtgatgttgtgcagtacggttttttaaatcttagtggaaagccgactcaccgcactatgatgtataacttccccactaaggcaggacagtgtggaggggtggtgacatcagttggaaaggttattggaatccatataggaggtaacggcaggcaaggtttctgtgcaggactcaagaggagttactttgctagtgaacaaggagagatccaatgggttaaacctaacaaggaaactggaagacttaacatcaatggcccaactcacaccaaactcgaacctagcgtgttttatgatgtcttcgagggcagtaaggagccagcagtcctacacagcaaagacccccgcctcgaggtggatttcgagcaagcattgttctccaagtacgtggggaacacactacacgagcctgatgagtacatcagagaggcagccctccattatgcaaatcagttaaaacagctagatatagacacctctcaaatgagcatggaggaggcctgttacggtacagataaccttgaagctattgacctccatactagcgcgggttacccctacagtgccctgggaataaagaagaaggacattttagaccccactaccagagatgtgagcaagatgaaattttacatggacaaatatggccttgaccttccttattccacttatgtcaaagatgagcttcgctcgatggaaaagatcaagaaagggaaatcccgtttgattgaggctagtagcttgaatgattcagtctatctcagaatggcgtttggacacctctatgaaaccttccatgcaaatcctggaaccgtgactggctcagccgtggggtgcaacccggatgtgttttggagcaaactaccaatcctgctccctggttctctctttgcctttgattattcgggctatgacgctagcctcagcccggtttggtttagagcactagagatagtccttagagagataggctattgtgaggagactgtctcacttattgaaggaatcaatcatacacatcacgtataccgcaataaaacctattgtgtgcttggtgggatgccctcgggctgttcaggaacatccattttcaactcaatgatcaataacattatcatcagagcattacttatcaaaacatttaagggtattgacttggatgaacttaacatggttgcctacggggacgatgtgcttgctagttacccttttccaatcgactgtctagaactagcaagaacaggcaaggagtatggtttgactatgactcctgcagacaagtccccttgctttaatgaagttaattgggaaaacgcaacctttctcaagagaggtttcttgcctgatgagcaatttccatttttgattcatcctaccatgccaatgaaggagatccacgaatccattcggtggaccaagaatgcacgcaacactcaagatcacgtgcgatccctatgcttattggcgtggcacaacggcaagcaagaatatgaaagttttgtgagcacaattagatctgtcccagtaggaaaagcattggccatcccaaattatgaaaacctgagacgtaattggctcgaattgtttt-----agaggttgaat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LC126146.1_Coxsackievirus_A6_genomic_RNA_complete_genome_strain:_Hyogo2196
------------------ttaaaa--cag-cct-gtgggttg-c-acccatccaca-gggcccac-c-gggcgccagcacactggttctacggaacctttgtgcgcct-g-ttttaca-----acccc---t---tccc-c-----aaactcgcaacttagaaga------------gtaatacgctatc-gatcaa-tagcaggcgtggcgcgccagccatgtctaga-tcaagcacttctg-tctccccggaccgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtaacgccattgaagctgcagagcgtttcgctcaaca--cta-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaggtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgtcctcaatcca-gggga-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgactaacagagctttgata-----tacctg----ttcgtg-ggctttgttccac-----tcaccaa--------------ttgtgcagttcat-actttgaagtacattttaatcctgaataatagaaa-------atgggcgcccaagtttcaacacaaaaatctgggtcgcacgagacaaggaatgtagcaactg-aagggtccaccatcaacttcaccaatattaattactataaggactcttacgcagcgtcggctagtagacaggactttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgctgctccgttacaatccccctctgttgaggcgtgcggttatagcgaccgagtcgcacagttgaccgtgggcaattcaactatcaccacccaagaggcagctaacattgtattgagctatggagagtggccagaatactgtccttctacggacgctacagccgtggacaagcctactcgccctgacgtgtcagtaaataggttctacacactgtcaactaagagctggaagacag------------------aatctactggctggtactggaagttccctgatgtactaaatgacacaggagttttcggtcaaaacgcccaatttcactacctgtaccgctcgggtttctgcatgcacgttcaatgtaatgcaagcaagttccatcagggggccctcttagtagccgcaatccccgaattcgtgattgctgcaagcagccctgctacgaagcctaacggacaagggttgtacccagattttgctcatactaacccaggaaaagatggccaagagtttcgggatccttatgttttggacgctggaatccctctaagtcaagcactggttttcccccatcaatggatcaacctacggactaacaactgcgcaaccattattatgccatatgtcaacgcgcttccatttgactcagcgcttaaccactcaaattttggattggttgtaatccctattagccctttgaaatattgtaatggagccaccacagaggtgccaattacactaactatagccccacttaattcggagtttagcggcctccgacaagcaataaaacaagggttccctacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccaccaatactacctggttttgaaccaactccattgattcacattcctggtgagttcacctctttattagatttgtgtcaagtggagaccatattagaagtcaataa----------t------accaccggcaccactggg------gtcaccagattattaatccctgttcgagcacagaata------atgtggaccagttatgtgcctcgttccaagtggatcctgggcgcaatggcccgtggcaatccacaatggttggccagatctgtaggtactacactcagtggtccggttctcttaaggtaaccttcatgtttacaggttcttttatggctacagggaaaatgctaatagcttacacaccacctggtagtgctcagcctgctacaagggaagcagcgatgctagggacgcatatagtgtgggattttggtttgcaatcatcagtcaccttagtcataccctggatcagtaacacccactttagggcggttaagactggaggggtatacgactactacgcgaccgggatcgtcaccatttggtaccagaccaacttcgtagtaccaccagatacccccaccgaagctaatatcatagctcttggagcagcacaaaagaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagccgaataccaaaatgatcct--------attacaaatgcagtgg---aaagtgctgtaagcgcgctcgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggtacagggcgtgtaccagcattacaagccgcagaaacgggagcaagttctaatgctagtgacgagaatcttattgagactcgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggaacatttttactcccgtgcagggctagtaggagttgtggaggtgaaggactcgggcactag----cttagatgggtatacagtgtggcccatagacgtaatgggttttgtgcaacagcggcgcaaactagagctatcaacatacatgcgctttgatgccgaattcacttttgtgtccaacctcaatgatagtacgacgcccggaatgttgttgcagtatatgtatgtgccaccaggggcccctaagccggatagtaggaaatcttaccaatggcagactgctaccaacccgtcggtatttgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtctccagcaacagcttatcagtggttttatgatggttaccctacattcggtgaacacaaacaagccactaatttacaatatgggcaatgtcctaacaacatgatgggccattttgccatccgaacagtcagtgagtctactaccgggaaaaacgtccacgttcgggtgtacatgagaattaaacatgtgagagcttgggtgcctaggcccctccggtcccaagcttacatggtcaagaattatccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggtggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacaatctggggctgtctatgtgggtaactttagagtggtaaaccgacatctcgccactcacaatgattgggcaaatttggtatgggaaagtagctcacgagatcttctggtgtcctccactactgctcaaggatgcgataccatcgcccggtgtaattgtcaaacaggagtgtactactgcaactctagaaggaagcactacccagtcagtttttctaaacctagccttgtcttcgtggaagctagtgaatactaccctgccaggtatcagtcacacctcatgcttgcagaaggacattctgagcccggggactgtggtggtatccttaggtgccaacatggcgtgattggtattgtgtccactggtggtaatggacttgttggattcgcagatgttagagatcttttgtggttggatgaagaagccatggagcagggtgtatctgattacatcaaa-gggctcggtgatgcatttgggactggttttactgacgcagtgtctagggaagtggaggctcttaagaactaccttataggatctgaaggggccgttgagaagatcttgaagaatttgattaaattgatctcagcgctggtcatagtgatcagaagcgattatgacatggtaaccctcacagcaaccttagcactcataggatgtcatggcagtccctgggcgtggatcaaggctaagacagcatccattttaggtatccctattgcccagaaacagagcgcatcgtggctcaaaaagtttaacgacatggccaacgctgccaagggatttgagtggatttccaataagatcagtaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttagaaaaccaaatctcgaacttggaacagtccgccgcttcacaagaggatcttgaggcaatgtttgggaatgtatcgtatctcgcaca---------cttctgccgtaaataccaaccgctttacgccacagaagccaaaagagtctatatcctggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttattatcagaggttccccaggtactggaaagtccttggcaaccggcattattgcccgagcaatagctgacaaataccactccagtgtgtactcacttccgccagacccagatcactttgatggttacaaacagcaagtggttacagtcatggatgatttatgccagaatcccgatggcaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttccttagaggaaaaaggagtttcattcacatctaaatttgtcattgcatccactaataccagtaatatcattgtaccgacagtgtccgactcagatgctatccgccgcaggttctatatggactgcgacatcgaggtcacagattcatacaaaacagatctcggtagattggatgctgggcgggccgctagactgtgttcagaaaacaacacagcgaacttcaagcgatgcagcccactggtgtgcgggaaagctatccagctgagggatagaaaatctaaagttaggtatagtgtggacgctgtggtttctgagctcataagagaatacaacaacaggtccgccattggaaacacaattgaagctctgttccagggtccactcaaatttaaacccataaggatc---aaccttgaggaaaaaccagcccctgacgcaattagtgatcttcttgccagtgtggacaatgaagaggtacgtcagtactgt-agagaccaaggttggattatcccagaaactcctacaaatgttgaacgacacctcaacagggctgtgttggtcatgcaatccattgccacagtggtagcagttgtctcattggtgtatgtcatctacaagttattcgctgggttccagggtgcatactctggcgctcccaagcaggtactcaatagaccaattctccgcacagcgactgtgcagggtccgagcctcgactttgccctgtcgctactgaggaggaatatcaggcaggtccagacagatcaagggcacttcactatgctgggtgtcagagaccgcttggctgtccttccacgacactcacaacccggaaagacgatctgggtagagcacaagctggtgagcgttctagacgctgtcgaactagtggatgaacaaggggtcaatttagaactgaccttaattaccctcgataccaatgagaaattcagagacatcactaagtttataccagaaaacatcagtgctgctagtgatgctaccttagtgattaacacagaacacatgccctctatgtttgtgccagtaggtgatgttgtgcagtacggtttcttaaatcttagtggaaagccgactcaccgcactatgatgtacaacttccccactaaagcaggacagtgtggaggggtggtgacatcagttggaaaggttattggaatccatataggaggcaacggcaggcaaggtttctgtgcgggacttaagaggagttactttgctagtgaacaaggagagatccaatgggttaaacctaacaaggaaactggaagacttaacatcaacggcccaactcacaccaaactcgaacctagcgtgttttatgatgtctttgagggcagtaaggagccagcagtcctacacagcaaagacccccgcctcgaggtggatttcgaacaagcattgttctccaagtacgtggggaacacactgcgcgagcctgatgagtacattagagaggcagctctccactatgcaaatcagttaaaacagctagatatagacacctctcaaatgagcatggaggaggcttgttacggtacagataaccttgaagctattgacctccatactagcgcaggttacccctacagtgccctgggaataaagaagagggacattttagaccccactaccagagatgtgagcaaaatgaaattttacatggacaagtatggccttgaccttccctattccacttatgtcaaagatgagctacgctcgatagaaaagatcaagaaagggaaatcccgtttgattgaggctagtagtttgaatgattcagtctatctcagaatggcgtttggacacctctatgaaaccttccatgcaaaccctggaaccgtgactggctcagctgtggggtgcaacccagatgtgttttggagcaaactaccaatcctgctccctggctctctctttgcctttgattactcgagctatgatgctagcctcagcccggtttggtttagggcactagaaatagtccttagagagataggctatagtgaggagactgtctcacttattgaaggaatcaatcatacacatcacgtttaccgcaataaaacctattgtgtgcttggtgggatgccctcgggctgttcagggacgtccattttcaactcaatgatcaataacattatcatcagagcattacttatcaaaacatttaagggtattgacttggatcaactcaacatggttgcctacggggacgatgtacttgctagttacccttttccaatcgattgtctagaactagcaagaacaggcaaggaatatggtttgaccatgactcctgcagacaagtccccttgctttaatgaagttaattgggagaacgcaacttttctcaagagaggtttcttgcctgatgagcaatttccattcttgattcatcctatcatgccaatgaaggagatccacgaatccattcggtggaccaaggatgcacgcaacactcaagatcacgtgcgatccttatgcctattggcgtggcacaacggcaagcaagaatatgaaaattttgtgagcacaattagatctgtcccagtaggaaaagcattggctatcccaaattatgaaaatctgagacgtaattggctcgaattgtttt-----agaggttaaat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KR706309.1_Coxsackievirus_A6_isolate_TW-2007-00141_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactctgattctacggaacctttgtgcgcct-g-ttttata-----acccc---t---cccc-------gaactcgtaacttagaaga------------atagca--ctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggactgagtatcgatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtaacaccattgaaactgcagagtgtttcgctcagca--cta-ctcca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggtgaccgtagcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaattgag-------agattgttgccatatagctattggattggccatccag--tgactaacagagctttgata-----tacctg----tttgtg-ggttttgttccac-----tcaccaa--------------ttgtacagttcaa-actctgaagtacattttaattctgaataatagaaa-------atgggcgcccaagtttcaacacaaaaatctgggtcgcacgagacaaggaatgtagcaactg-aagggtctaccatcaacttcaccaatatcaattactacaaggattcttatgcagcgtcggctagtagacaggactttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaagttgccgctccgttacaatccccctctgttgaggcgtgcgggtatagtgaccgagtcgcacagttgaccgtgggtaactcaaccatcaccacccaagaagcagctaatattgtgttgagctatggagagtggccagaatactgtccttctacggatgctacagctgtggataagcctacccgccctgacgtatcagtgaacaggttctacacactgtcaactaagagctggaagacgg------------------agtctactggctggtactggaagttccctgatgtgttaaatgacacaggagtttttggccaaaatgcccaatttcactacctgtaccgctcgggtttctgcatgcacgttcaatgtaatgcaagcaaattccatcagggggccctcttagtagccgcaatccccgaatttgtgattgctgcaagcagccctgctacgaagcctaacgggcgaggattgtacccagactttgcccatactaacccaggtaaggatggtcaagagtttcgggatccttatgtcttggacgctggaatccccctaagtcaagcactggttttcccccaccaatggatcaacctacgaacaaacaactgtgcaaccattattatgccatatgttaacgcgcttccatttgactcagcgcttaaccactcgaattttggattagttgtgatccctattagtcctttaaaatattgtaatggagccaccacagaggtgccagttacactaaccatagccccacttaattcagagttcagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccgccaatactacctggttttgaaccgactccattgatccatattcctggagagttcacctccttgttagatttgtgtcaaatagagaccatactagaagttaataa----------t------actaccggcaccattggg------gtaagcagattgctaattcctgttcgagcgcagaata------atgtggaccagttatgtgcctcgttccaagtagatcctggacgcaatggcccatggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttctctcaaggtaaccttcatgtttacaggttctttcatggctacagggaaaatgctaatagcctacacaccacccggtagtgctcagcccgctacaagggaagcagcgatgcttgggacgcacatagtgtgggattttggtttgcaatcatctgtcactttagtcataccctggattagtaacacccattttagagcggttaagattggaggggtatacgactactacgcgactgggatcgtcaccatttggtaccagaccaacttcgtagtaccaccagatacccccaccgaggctaacatcatagctcttggagcagcacaaaagaactttaccctaaagttgtgcaaggacactgatgaaatccaacaaacagccgcataccaaaatgatcct--------atcgcaaatgcggtag---aaagtgctgtaagcgcactcgc--------------tgacaccacaatatcccgagtg--------------------------------accgcagccaacactacagctagcactcactccctgggtacggggcgtgtaccagcattgcaagccgcagaaacgggagcaagttctaatgctagtgacgaaaaccttgttgagactcgttgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggaacacttttactcccgtgcagggctggtaggagttgtagaggtgaaggactcgggcactag----cctagatggatatacagtgtggcccatagacgtgatgggttttgtgcaacaacggcgcaaactggagctatcgacatacatgcgctttgatgccgagttcacttttgtatccaacctcagtaacagcacgacgcccggaatgctgttgcagtatatgtatgtgccaccaggggcccctaaaccggatggtaggaagtcataccaatggcagaccgccaccaacccgtcggtatttgcaaaattgagtgatccacccccccaggtgtctgtcccattcatgtctccagcaacagcttatcagtggttctatgatggttaccctacattcggtgagcacaaacaagccactaatttacaatatgggcagtgccctaacaacatgatgggccattttgccatccgaacagtcagtgagtctactactgggaagaacgtccatgttcgggtgtatatgagaattaaacatgtgagagcttgggtgcctaggcccctccgatcacaagcttacatggtcaagaattatccaacatacagccaaac----aataactaatactgcaactgaccgtgcaagcataac---taccacagactatgaaggtggggtaccagcaagcccacaaagaacatctggt------------------------------------------aagtttggccaacagtctggggctgtctatgtgggtaattttagagtggtaaaccgacatctcgccacccacactgactgggcaaatttggtatgggaaagtagctcacgagatctcctggtgtcctccactaccgctcaaggatgtgataccattgctcggtgtaattgtcaaacgggagtgtattactgcaactctagaaggaagcactacccagtcagtttctccaagcctagccttgtcttcgtggaagctagtgagtactatcctgctaggtaccagtcacaccttatgcttgcagtagggtattctgagcccggagactgtggtggcatccttagatgccagcacggcgtgattggtatcgtgtccactggaggtaacgggcttgtcggatttgcagatgtcagagatcttctgtggttagatgaagaagccatggaacagggtgtatctgattacatcaaa-gggctcggtgatgccttcggaactggttttactgacgcagtatctagggaagtggaggctctaaaaaactaccttataggatctgaaggggctgttgagaaaattttgaagagtttgattaaattgatctcagcgttagtcatagtgatcagaagtgattatgacatggtaacccttacagcaaccttagcactcataggatgtcatggcagtccctgggcgtggatcaaggctaagacagcatccattttgggcatcccgatcgcccagaagcagagcgcatcgtggctcaagaagtttaatgacatggctaacgctgctaagggacttgagtggatttccaacaagatcagtaaatttattgattggattaaggagaaaattgtaccagcagctaaggagaaggtcgaatttttgagtaatctaaaacaactgcca-ttattggagaatcaaatctcaaacttggaacagtccgccgcttcacaggaagatcttgaggcaatgtttgggaatgtgtcgtatctcgcgca---------cttctgccgtaaataccaaccactctacgccacagaagccaaaagagtttatgttctggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggttctccaggtactggaaagtccttagcgaccggcattattgcccgagcaatagctgataaataccactctagtgtgtactcgcttccgccagatccagatcactttgatggttacaaacagcaagtggtgacagttatggatgatttatgccagaatcctgatggcaaggatatgtcactcttttgtcagatggtatccactgtggattttatcccaccaatggcttccttagaggagaaaggagtctcgtttacatccaaattcgtcattgcgtccactaatgccagcaacatcattgtaccgacagtgtccgactcagatgctatacgccgcaggttctacatggactgtgatattgaggtcacagattcatataaaacagacctcggcagattggatgctgggcgggccgctaaactgtgctcggagaacaacacagcaaactttaagcgatgtagcccactggtgtgcgggaaagctatccagctgagggatagaaagtctaaagttaggtatagtgtggacactgtgatttctgaacttataagagagtataataacaggtctgccattggaaacacaattgaagccttgttccagggaccacccaaatttagacccataaggatt---aatcttgaggaaaggtcagcccctgatgccattagtgatctccttgccagtgtggatagcgaagaggtgcgtcagtactgt-agggaacaaggctggatcgtcccagatacccccacaaatgttgaacggcacctcaacagagctgtactggtcatgcagtccatcgccacagtggtggcagttgtctcattagtgtatgtcatctataagctcttcgccggattccaaggtgcatactctggcgctcccaagcaagcacttaagaaacccattctccgcacggcaacagtgcagggcccgagccttgactttgctctatcactactgaggaggaacatcagacaagttcaaacggaccaagggcacttcaccatgctaggtgtcagagatcgcttggccgtcctcccacgacactcacaacccggaaaaaccatctgggtagagcacaaactagtgaacgttgtggatgctgccgaactagtggatgaacagggggtcaacttagagctgactttaatcaccctcgacactaatgagaagtttagagacatcaccaaatttattccagagaatatcagcgctgccagtgatgccactctagtgattaatacagagcacatgccttctatgtttgtgccagtaggtgatgttgttcagtatggtttcctgaatcttagtgggaaaccaacccaccgcactatgatgtataacttccctaccaaggcaggacagtgtggaggggtagtcacatcagttggaaaggtcattggtatccacataggaggcaatggcaggcaaggtttctgtgcagggctcaagagaagctactttgctactgaacagggagagatccagtggattaaacctaacaaggaaacaggaagacttaacatcaatggaccaactcgcaccaagcttgaacccagtgtgtttcatgatgtctttgagggcaataaggagccagcagtcctacatagcaaagaccctcgccttgaggtggattttgagcaggcgttgttctccaagtatgtgggaaacacactacatgagcctgatgaatatatcagagaggcagccctccactatgcaaatcaactgaagcagctagacatagacacctcccaaatgagcatggaagaggcctgctatggcacagacaaccttgaagccattgaccttcatactagtgcaggctacccctatagtgcactgggaataaagaagagggacattttggaccccgctaccagggatgtaaacaagatgaagttctatatggataagtatggccttgacctcccctattctacttatgtcaaggatgagcttcgctcattggacaaggtcaagagagggaaatcccgtttgatagaagccagcagtttgaatgattcggtttatctcaggatgacttttgggcacctctatgaaactttccatgcaaaccctgggactgtgactggttcagctgtggggtgcaacccggatgtgttttggagcaagttaccaattctgctccctggttctctctttgcttttgactattcaggctacgatgctagcctcagtccagtttggtttagagctctggagctagtccttagagagataggctatagtgaggaggcggtctcacttattgaaggaatcaatcacacccaccacgtgtaccgcaacaaaacctattgcgtacttggcgggatgccttcaggctgttcaggaacgtccatcttcaactcaatgattaacaacattatcattagggcattgcttattaagacattcaagggcattgatttggacgaactcaacatggttgcctacggggacgacgtgctcgccagttacccctttccaatcgactgtctagagctagcaagaacaggtaaagagtatggcctaaccatgaccccggcagacaagtccccttgcttcaatgaagtcaattgggaaaatgcaaccttcctcaagagaggctttttgcctgatgagcaattcccattcttgattcaccccaccatgccaatgaaggagatccatgaatccattcggtggaccaaggatgcacgtaacactcaagatcatgtgcggtccctatgcctgttggcatggcacaacggtaagcaagaatatgaaaaatttgtgagcacaattagatctgtcccaatagggaaagcattggcaattcccaattatgaaaatttgagacgcaattggctcgaattgttct-----agaggttagac-------------------------tcac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcagaaaaaaaaaa-----------------------------------------------------------------------aaaaaaaa----aa--------------------aaaaaaa----------------------------------------------------------------------------------------------------
>JQ946050.1_Human_coxsackievirus_A6_isolate_TW/20/09_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctacggaacctttgtgcgcct-g-ttttaca-----acccc---t---cccc-------gaactcgcaacttagaaga------------atagcacgctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggactgagtatcgatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaagcc-tagtaacaccattgaaactgcagagtgtttcgctcagca--cta-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgcg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaattgag-------agattgttgccatatagctattggattggccatccag--tgattaacagagctttgata-----tacctg----tttgtg-ggttttgttccac-----ccaccaa--------------ttgtacagctcaa-actttgaagtacattttaattctgaataatagaaa-------atgggcgcccaagtctcaacacaaaaatctggatcgcacgagacaaggaatgtagcaactg-aagggtccaccattaacttcaccaatatcaattactacaaggattcttacgcagcgtcggctagtagacaggactttgcacaagatcctgcaaagtttacacgtcctgtcttggacaccatcagggaagttgccgctccgttacaatccccctctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcaaccattactacccaagaggcagccaacattgtattgagctacggagagtggccagaatactgtccctccacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgacacaggagtattcggtcaaaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgcaatgcaagcaagttccatcagggggccctcttagtggctgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaatggacaagggttgtacccagattttgctcatactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggacgctggaatccctctaagtcaagctctggttttcccccaccaatggatcaacctacgaacaaacaactgtgcaaccattattatgccatatgttaacgcgcttccatttgactcagcgcttaaccactcaaattttggattagttgtgatccctattagtcctttgaaatactgtaatggagccaccacagaggtgccagttacactaactatagccccacttaattcagagttcagcggcctccgacaagcaataaaacaagggttccctacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccgccaatactacctggttttgaaccgactccattgatccatattcctggtgagttcacctccttgttagatttgtgtcaagtagagaccatactagaagttaataa----------t------actaccggcaccactggg------gtaaatagattgctaattcctgttcgagcgcagaata------atgtggaccaattatgcgcctcgttccaagtagatcctggacgcaatggcccatggcaatccactatggtcggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggttctttcatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagtcaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaacattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagcgtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctgggaacagggcgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaatggggtcaatgaggcgagtgtggaacacttttactcccgtgcagggctggtaggagttgtggaggtgaaggactcgggcactag----cctggatgggtacacagtttggcccatagatgtgatgggcttcgtgcaacagcggcgcaagctagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgatagcacgacacccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaacagtcagtgaatctaccaccggaaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aagtttggccaacagtccggggctgtctatgtgggtaattttagagtggtaaaccggcatctcgccacccacactgactgggcaaatttagtatgggaaagtagctcacgagacctcctggtgtcctccactaccgctcaaggatgtgatactattgcccggtgtaattgtcaaacgggagtgtattactgcaactctagaaggaagcactacccagtcagtttctccaagcctagccttgtcttcgtggaagctagtgagtactatcctgctaggtaccagtcacaccttatgcttgcagtaggatattctgagcctggagactgtggtggcatccttagatgccagcatggcgtgattggtatcgtgtccactggaggtaatgggcttgtcggatttgcagatgtcagagatcttctgtggttagatgaagaagccatggaacagggtgtatctgattacatcaaa-gggctcggtgatgccttcggaactggttttactgacgcggtatctagggaagtggaagctctaaagaactaccttataggatctgaaggggctgttgagaagatcttgaagaatttgattaaattgatctcagcgttagtcatagtgatcaggagtgattatgacatggtaacccttacagcaaccttagcactcataggatgtcacggcagtccctgggcgtggatcaaggctaagacagcatccattttgggcatcccgatcgcccagaagcagagcgcatcgtggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacctggagcagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaactggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatctaaatttgttattgcatccaccaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagtccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgctattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggtgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaatcatgcaatccattgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgcacggcgacagtgcagggtccgagccttgacttcgctctgtcattactgaggagaaacatcagacaagttcaaacggaccaagggcacttcaccatgctaggagtcagagatcgcttggccgtcctcccacgacactcacaacccggaaaaactatctgggtagagcacaagctagtgaatgttgtggatgctgtcgaactagtggatgagcagggggtcaacttagagctgactttaatcaccctcgacactaatgagaagtttagagacatcaccaaatttattccagagaatatcagcgctgccagcgatgccactctagtgattaatacagagcacatgccttctatgtttgtgccagtaggtgatgttgttcagtatggtttcctgaatcttagtgggaaaccaacccaccgcactatgatgtataacttccctaccaaggcaggacagtgtggaggggtagtcacatcagttggaaaggtcattggtatccacataggaggcaatggcaggcaaggtttctgtgcagggctcaagagaagctactttgctactgaacagggagagatccagtgggttaaacctaacaaggagacaggaagacttaacatcaatggaccaactcgcaccaagctcgaacccagtgtgtttcatgacgtctttgagggcaataaggagccagcagtcctgcacagcaaagaccctcgccttgaggtggattttgagcaggcgttgttctccaagtatgtgggaaacacactacatgagcctgatgaatatatcagagaggcagctctccactatgcaaatcaactgaagcagctagacatagacacctcccaaatgagcatggaagaggcctgctatggcacagacaaccttgaagccattgaccttcatactagtgcaggctacccctatagtgcactgggaataaagaagagggacattttggaccccactaccagggatgtaaacaagatgaagttctatatggataagtacggccttgacctcccctattctacttatgtcaaggatgagcttcgctcattggacaaggtcaggagagggaaatcccgtttgatagaagctagcagtttgaatgactcggtttatctcaggatgacttttgggcacctctatgaaactttccatgcaaaccctgggactgtgactggctcagctgtggggtgcaacccggatgtgttttggagtaagttaccaattctgctccctggttctctctttgcttttgactattcaggctatgatgctagcctcagtccagtttggtttagagccctggagctagtccttagagagataggctatagtgaggaggcagtctcacttattgaaggaatcaatcacacccaccacgtgtaccgcaacaaaacctattgcgtacttggcgggatgccttcaggctgttcaggaacgtccatcttcaactcaatgattaacaacattatcatcagggcattgcttattaagacattcaagggcattgatttggacgaactcaacatggttgcctacggggacgacgtgctcgccagttacccctttccaatcgactgtctagagctagcaagaacaggtaaagagtatggcctaaccatgaccccggcagacaagtctccttgcttcaatgaagtcaattgggaaaatgcaaccttcctcaagagaggctttttgcctgatgagcaattcccattcttgattcaccccaccatgccaatgaaggagatccatgaatccattcggtggactaaggatgcacgtaacactcaagatcatgtgcggtccctatgcctgttggcatggcacaacggtaagcaagaatatgaaaaatttgtgagcacaattagatctgtcccaatagggaaagcattggcaattcccaactatgaaaacttgagacgcaattggctcgaattgttct-----agaggttagac-------------------------tcac---------------ctcaaccc-caccagaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ946051.1_Human_coxsackievirus_A6_isolate_TW/273/09_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcacactgattctacggaacctttgtgcgcct-g-ttttaca-----acccc---t---tccc-c---g-aaactcgcaacttagaaga------------acagcacgctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggactgagtatcgatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaagcc-tagtaacaccattgaaactgcagagtgtttcgctcagca--cta-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgcg-aagagcctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaattgag-------agattgttgccatatagctattggattggccatccag--tgactaacagagctttgata-----tacctg----tttgtg-ggttttgttccac-----tcaccaa--------------ttgtacagttcaa-actttgaagtacattttaattctgaataatagaaa-------atgggcgcccaagtctcaacacaaaaatctggatcgcacgagacaaggaatgtagcaactg-aagggtccaccattaacttcaccaatatcaattactacaaggattcttacgcagcgtcggctagtagacaggactttgcacaagatcctgcaaagtttacacgtcctgtcttggacaccatcagggaagttgccgctccgttacaatccccctcagttgaggcgtgcgggtatagtgaccgagtcgcacagttgactgtgggtaactcaaccatcaccacccaagaggcagctaatatagtgttgagctatggagagtggccagaatactgtccttctacggacgctacagctgtggataagcctacccgccctgacgtgtcagtgaacaggttctacacactgtcaactaagagctggaagacgg------------------agtctactggctggtactggaagttccctgatgtgttaaatgacacaggagtttttggccaaaatgcccagtttcactacttgtaccgctcgggtttctgcatgcacgttcaatgtaatgcgagcaaattccatcagggggccctcttagtagccgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaacgggcaaggattgtacccagattttgcccataccaacccaggtaaagatggtcaagagtttcgggatccttatgtcttggacgctggaatccctctaagtcaagctctggttttcccccaccaatggatcaacctacgaacaaacaactgtgcaaccattattatgccatatgttaacgcgcttccatttgactcagcgcttaaccactcaaattttggattagttgtgatccctattagtcctttgaaatactgtaatggagccaccacagaggtgccagttacactaactatagccccacttaattcagagttcagcggcctccgacaagcaataaaacaagggttccctacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccgccaatactacctggttttgaaccgactccattgatccatattcctggtgagttcacctccttgttagatttgtgtcaagtagagaccatactagaagttaataa----------t------actaccggcaccactggg------gtaaatagattgctaattcctgttcgagcgcagaata------atgtggaccaattatgcgcctcgttccaagtagatcctggacgcaatggcccatggcaatccactatggtcggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggttctttcatggccacagggaaaatgctgatagcctacacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagtcaccctagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgactactacgcaaccgggatcgtcaccatttggtaccaaaccaacttcgtagtgccaccagatacccccactgaggctaacattatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaatgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactacagctagcacccactccctgggaacaggacgtgtaccagcattgcaagccgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagactcgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggaacacttttactcccgtgcagggctggtaggagttgtggaggtgaaggactcgggtactag----cctagatggatatacagtgtggcccatagacgtgatgggtttcgtgcaacagcggcgcaaactggagctatcgacgtacatgcgctttgatgccgagttcacttttgtgtccaacctcaatgatagcacgacgcccgggatgctgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcatatcaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaacagtcagtgaatctaccaccggaaaaaacgtccacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaaggacatctggt------------------------------------------aagtttggccaacagtccggggctgtctatgtgggtaattttagagtggtaaaccggcatctcgccacccacactgactgggcaaatttagtatgggaaagtagctcacgagacctcctggtgtcctccactaccgctcaaggatgtgatactattgcccggtgtaattgtcaaacgggagtgtattactgcaactctagaaggaagcactacccagtcagtttctccaagcctagccttgtcttcgtggaagctagtgagtactatcctgctaggtaccagtcacaccttatgcttgcagtaggatattctgagcctggagactgtggtggcatccttagatgccagcatggcgtgattggtatcgtgtccactggaggtaatgggcttgtcggatttgcagatgtcagagatcttctgtggttagatgaagaagccatggaacagggtgtatctgattacatcaaa-gggctcggtgatgccttcggaactggttttactgacgcggtatctagggaagtggaagctctaaagaactaccttataggatctgaaggggctgttgagaagatcttgaagaatttgattaaattgatctcagcgttagtcatagtgatcagaagtgattatgacatggtaacccttacagcaaccttagcactcataggatgtcacggcagtccctgggcgtggatcaaggctaagacagcatccattttgggcatcccgatcgcccagaagcagagcgcatcgtggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagtaaatttattgattggctcaaggagaaaattataccagcagctaaagagaaggtcgagtttttgagcaacctaaaacaactgccg-ttgttggaaaaccaaatctcaaacctggagcagtccgccgcttcacaagaagaccttgaggcaatgtttgggaatgtatcgtatctcgctca---------cttctgccgtaaataccaaccactttatgctacagaagccaaaagagtttatgctttggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcagaggctccccaggtactggaaagtccttggcaaccggtataattgcccgagcaatagctgacaaataccactctagtgtgtactcacttccgccagatccagatcactttgatggttacaaacagcaagtggtcacagttatggacgatctatgccaaaatcctgatggcaaggatatgtcactcttttgccagatggtatccactgtagattttatcccaccaatggcttctttagaagagaaaggagtttcattcacatctaaatttgttattgcatccaccaatgctagcaatatcatagtgccaacagtgtctgattctgatgctattcgccgcaggttctacatggactgcgacatcgaggtaacggactcgtataaaacagatttgggtaggttagatgctggaagagctgccaaattatgctctgaaaataacacagcaaacttcaaacgctgcagtccactagtgtgtgggaaggccatccaactaagagataggaagtccaaagttagatacagtgtggatacggtggtttcagagctcataagggaatacaataacaggtctgctattggaaacacaattgaagcgttgttccaggggccacccaagtttagacctattaggatt---agtcttgaggaggtgccagcaccagatgttattagtgatcttcttgccagtgtggatagtgaagaggtgcgccaatactgt-agagaccaaggttggatcataccagaaacccctaccaacgttgagcgacatctaagtagggctgtactaatcatgcaatccatcgccacgatcgttgcagtagtctcactggtgtatgttatctacaaactttttgctggatttcagggtgcgtattctggcgctcctaagcaagtgctcaagaaacctatcctccgtacggcaacagtgcagggacctagccttgattttgccctatccctactgagaaggaacatcagacaagttcaaacggaccaagggcacttcaccatgctaggagtcagagatcgcttggccgtcctcccacgacactcacaacccggaaaaactatctgggtagagcacaagctagtgaatgttgtggatgctgtcgaactagtggatgagcagggggtcaacttagagctgactttaatcaccctcgacactaatgagaagtttagagacatcaccaaatttattccagagaatatcagcgctgccagcgatgccactctagtgattaatacagagcacatgccttctatgtttgtgccagtaggtgatgttgttcagtatggtttcctgaatcttagtgggaaaccaacccaccgcactatgatgtataacttccctaccaaggcaggacagtgtggaggggtagtcacatcagttggaaaggtcattggtatccacataggaggcaatggcaggcaaggtttctgtgcagggctcaagagaagctactttgctactgaacagggagagatccagtgggttaaacctaacaaggagacaggaagacttaacatcaatggaccaactcgcaccaagctcgaacccagtgtgtttcatgacgtctttgagggcaataaggagccagcagtcctgcacagcaaagaccctcgccttgaggtggattttgagcaggcgttgttctccaagtatgtgggaaacacactacatgagcctgatgaatatatcagagaagcagctctccactatgcaaatcaactgaagcagctagacatagacacctcccaaatgagcatggaagaggcctgctatggcacagacaaccttgaagccattgaccttcatactagtgcaggctacccctatagtgcactgggaataaagaagagggacattttggaccccactaccagggatgtaaacaagatgaagttctatatggataagtacggccttgacctcccctattctacttatgtcaaggatgagcttcgctcattggacaaggtcaggagagggaaatcccgtttgatagaagctagcagtttgaatgactcggtttatctcaggatgacttttgggcacctctatgaaactttccatgcaaaccctgggactgtgactggctcagctgtggggtgcaacccggatgtgttttggagtaagttaccaattctgctccctggttctctctttgcttttgactattcaggctatgatgctagcctcagtccagtttggtttagagccctggagctagtccttagagagataggctatagtgaggaggcagtctcacttattgaaggaatcaatcacacccaccacgtgtaccgcaacaaaacctattgtgtacttggcgggatgccttcaggctgttcaggaacgtccatcttcaactcaatgattaacaacattatcattagggcattgcttattaagacattcaagggcattgatttggacgaactcaacatggttgcctacggggacgacgtgctcgccagttacccctttccaattgactgtctagagctagcaagaacaggtaaagagtatggcctaaccatgaccccggcagacaagtctccttgcttcaatgaagtcaattgggaaaatgcaaccttcctcaagagaggctttttgcctgatgagcaattcccattcttgattcaccccaccatgccaatgaaggagatccatgaatccattcggtggactaaggatgcacgtaacactcaagatcatgtgcggtctctatgcctgttggcatggcacaacggtaagcaagaatatgaaaaatttgtgagcacaattagatctgtcccaatagggaaagcattggcaattcccaactatgaaaacttgagacgtaattggctcgaattgttct-----agaggttagac-------------------------tcac---------------ctcaaccc-caccagaa----atctggt------c-g-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LC126147.1_Coxsackievirus_A6_genomic_RNA_complete_genome_strain:_Hyogo3818
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccgca-gggcccac-t-gggcgctagcacactgattctacggaatctttgtgcgcct-g-ttttaat-----atccc---t---tccc-c-----aaactcgtaacttagaaga------------atagcacgttgcc-gatcaa-tagcaggcatggcgcaccagccatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtaacatcattgaaactgcagagcgtttcgctcagca--cta-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttggtaatcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcattcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attc-tatgctggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgactaacagagctttgatt-----tacctg----tttgtg-ggttttgttccac-----tcaccaa--------------ttgtacagttcac-actttgaagtacattttaatcctgaataatagaaa-------atgggcgcccaagtttcaacacaaaaatctgggtcgcacgagacaaggaatgtagcatctg-aagggtccaccatcaacttcaccaatatcaactactataaggactcttacgcagcatcggctagtagacaggactttgcacaagatcctgcaaaattcacacgtcctgtcttagatgcaatcagggaggccgccgctccgttacaatccccctctgttgaggcatgcggttatagtgaccgagtcgcacagttgactgtgggcaactcgaccatcaccacccaagaggcagctaacatagtattgagctatggagagtggccagaatactgtccctctacggacgctacagctgtggataaacccactcgccctgacgtgtcagtgaataggttctatacactgtcaaccaagagctggaagacag------------------aatctactggctggtattggaagttccctgatgtactaaatgacacaggagttttcggtcaaaacgctcaattccactacctgtatcgctcgggcttctgcatgcatgttcaatgtaatgcgagcaaattccatcagggggccctcttggtagccgcaatccccgaattcgtgattgctgcaagcagccctgccacgaaacctaatggacaagggttgtacccagattttgctcatactaacccaggcaaagatggtcaagagttccgggatccttatgtcttggacgctggaatccctctaagtcaagcactagtttttccccaccaatggatcaacctacgaactaacaactgtgcaaccattattatgccatacgtcaacgcgcttccatttgactcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttgaaatattgtaatggagccaccacagaggtgccgatcacactaactatagccccacttaattcagagttcagcggtctccgacaagcaataaaacaagggttccccacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccgccaatactaccaggttttgaaccaactccattgattcacattcctggtgaattcacttctttattagatttgtgtcaagtggagaccatactagaagtcaataa----------t------accaccggcaccactggg------gtcaatagattactaatccctgttcgagcgcagaata------atgtcgaccagttatgtgcctcgttccaagtggaccctgggcgcaatggcccatggcaatccacgatggttggtcagatctgtaggtactacactcaatggtctggttcccttaaggtaaccttcatgtttacaggttcttttatggccacagggaaaatgttaatagcctacacaccacctggtagtgctcagcctgctacaagggaagcagcaatgcttggaacgcatatagtgtgggattttgggttacaatcatcagttactttagtcataccctggattagtaacactcattttagggcggttaagactggaggggtgtacgactactacgcgaccgggatcgtcaccatttggtatcagaccaacttcgtagtaccaccagatacccccactgaggctaacatcatagctcttggagcagcacaaaagaactttaccctgaagttgtgtaaggacaccgatgagatccaacaaacagctgaataccaaaacgatcct--------attacaaatgcagtgg---aaagtgctgtaagcgcgctcgc--------------tgacaccacaatatcccgggta--------------------------------accgcagctaatactgcagccagcacccactccctgggtacaggacgtgtacctgcattgcaagccgcagaaacgggagcaagttctaattctagtgatgagaatcttatcgagactcgctgtgtgatgaatcgaaatggggtcaatgaggcgagtgtggaacacttttactctcgtgcggggctggtaggagttgtggaggtgaaggattcgggtactaa----cctagatgggtatacagtatggcctatagacgtgatgggttttgtacaacagcggcgcaaactagagctatcaacatacatgcgctttgatgctgagttcacttttgtgtccaacctcaatgatagtacgactcctggaatgctattgcaatatatgtatgtaccaccaggagcccctaagccggatagtagaaaatcataccaatggcagactgctaccaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtcagtcccgttcatgtctccagcgacagcttatcagtggttttatgatggttaccctacattcggtgagcacaagcaagccactaatttgcaatatggacagtgtcctaacaacatgatgggtcattttgccatccgaacagtcagtgagtccaccaccgggaaaaacatccacgttcgggtgtacatgagaattaaacacgtgagagcttgggtgcctaggcccctccgatcccaagcttatatggtcaagaattatccgacatatagccaaac----aataactaacactgcaactgaccgcgcaagcataac---caccacggattatgaaggtggggtgcctgcaaatccacaaagaacatctggt------------------------------------------aagttcggtcaacaatccggagctatctatgtgggtaactttagagtggtaaaccgacatctcgctactcacaatgactgggcaaatttggtatgggagagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgacaccattgctcggtgtaactgtcaaacaggagtgtattactgcaactctagaaggaagcactacccagtcagcttctcaaagcctagccttgtctttgtggaagctagtgagtattatcctgctaggtatcagtcgcacctcatgcttgcggaaggacattcagagcccggggactgtggtggtatccttaggtgccagcatggtgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttatggttggatgaggaagccatggaacagggtgtgtctgattacatcaaa-gggctcggtgatgctttcggaactggttttactgatgcagtgtctagggaagtcgagactcttaaaaactaccttgtgggatctgaaggggctgtcgagaagatcttgaaaaatttggtcaaattgatctcagcgctagttatagtgatcaggagtgattatgacatggtaaccctcacagcaaccttagcactcattggatgtcacggcagtccctgggcgtggatcaaggctaaaacagcatccattttgggtatccctatcgcccagaagcagagcgcatcatggcttaagaagtttaacgacatggccagcgctgccaagggattcgagtggatctctaataaaatcagtaaatttatagactggctcaaggagaaaattgtaccagcagctaaagagaaagtcgagtttttgagtaacttaaaacaactacca-ttgctggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagatcttgaggcaatgtttgggaacgtgtcgtacctcgcaca---------cttctgccgcaagtaccagccactttacgccacagaggccaaaagagtctatgctctggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgagcctgtatgtctcatcatcagaggttccccaggtactggaaagtccttggcaactggtatcattgcccgagcaatagctgacaaataccactctagtgtgtattcactcccaccggatccagaccactttgatggttacaaacagcaagtggtcacagttatggatgatttatgccagaatcctgatggcaaggatatgtcgctcttctgtcagatggtatctactgtcgattttatcccaccaatggcctccttagaagagaaaggtgtttcgtttacatctaaatttgtcattgcatccaccaacgccagtaacatcattgtaccgacagtgtccgactcagatgccatacgccgcaggttctatatggactgcgatatcgaggtcacagactcatacaaaacagatctcggtagattggacgctgggcgggccgctaaactgtgttcggaaaacaacacagcaaactttaaacgatgcagcccactagtgtgtgggaaagctatccagctaagagacagaaaatctaaagtcaggtatagtgtggacactgtggtttccgaactcataagagagtacaacaaccggtccgccattggaaacacaattgaagctttgttccagggcccacccaaatttagacccatgaggatc---agccttgaggagaaaccagctcccgacgccattagtgatcttctcgccagtgtggacagcgaggaagtgcgtcagtactgt-agagatcagggttggatcattccagagactcctaccaatgttgagcggcatctcaacagggctgtgttaatcatgcaatctattgccacagttgtggcagttgtctcattggtgtatgtcatctataaactctttgctgggttccaaggtgcatactctggtgctcctaaacaggccctcaagaagcccatcctccgcacggcaacagtgcagggcccgagtctcgacttcgccttatcactattaaggaggaatatcaggcaagtccagacagaccaaggacacttcacaatgctgggtgtcagggaccgcttagctgtcctaccacgacactcgcagcctggagaaacaatttgggtggagcacaagcttgtgaacgtcctggacgccgtcgagctggtggacgagcaaggggttaacctagagctgaccttagtcacccttgataccaatgagaaattcagagatatcaccaaatttattccagaaagcatcagtgctgctagtgatgccactctagtaatcaacacagaacacatgccttcaatgtttgtgccagtaggtgatgttgtacagtacggttttctaaatcttagtgggaagcccacccaccgcactatgatgtataatttccctactaaagcaggacagtgtggaggagtggtgacatcagttggaaaggttattggcatccacataggaggtaatggcaggcaaggtttctgcgcaggactcaagaggagctattttgctagtgaacaaggggagatccaatgggtaaaacctaataaagagactggaagacttaacatcaatgggccaactcgcaccaaactcgagcccagtgtgttccatgacgtctttgagggcaataaagaaccagcggttttacacagcaaagacccccgccttgaggtagattttgagcaggccctgttctctaagtatgtaggaaacacgctgcacgaacctgatgaatacattaaggaggcagccctccactatgcaaatcagttgaagcagctagatatagatacctctcaaatgagcatggaggaagcttgctatggcactgacaaccttgaagctattgaccttcacactagcgcaggctacccctacagtgccttgggaataaggaagagagacatcttggaccccaccactagagatgtaactaagatgaaattctatatggataagtatggacttgatctcccttattccacctatgttaaggatgagctccgctcgattgataagatcagaaagggaaaatcccgcttgattgaagctagcagtttgaatgactcagtttacctaagaatggcttttggacacctttacgaaactttccatgcaaaccctgggactgtaactggttcagctgtggggtgcaacccagatgtgttttggagtaagttaccaatcctactccctggttccctctttgcttttgactattcgggctatgatgctagcctcagcccagtttggtttagagcactagagctagtccttagagaagtgggctatagtgaggaggcagtctcgctcattgaagggattaaccacacgcaccatgtgtaccgcaacaaaacctattgcgtgcttggtgggatgccctcgggctgttcaggaacatccatcttcaactcaatgatcaataacatcattattagagcattactcattaagacatttaagggtatcgacctggatgaactcaatatggtcgcctacggggatgacgtactcgccagctacccattcccaattgattgcctagaactagcaagaacaggcaaggagtatggtctgactatgacccctgcagataagtccccttgcttcaatgaggttaattgggagaatgcaaccttcctcaagagaggtttcttacctgacgagcaatttccatttttgattcaccccaccatgccgatgaaggaaatccacgaatctatccggtggactaaggatgcacgtaacactcaagatcacgtgcgatccttatgcttattggcgtggcacaacggcaggcaagaatacgaaaaatttgtgagcactattaggtccgtcccagtaggaaaagcattggctattcctaattatgaaaatctgagacgcaattggctcgaactatttt-----agaggttaatt-------------------------atac---------------ctcaaccc-cactagga----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AB779617.1_Coxsackievirus_A6_genomic_RNA_complete_genome_strain:_Kyoto4
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcacactgattctacggaatctttgtgcgcct-g-tttttat-----atccc---t---tccc-c-----aaactcgtaacttagaaga------------atagcacgttgtc-gatcaa-tagcaggcatggcgcaccagccatgtctaga-tcaagcacttctg-tctccccggatcgagtaccaatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtaacaccattgaaactgcagagcgtttcgctcatca--cta-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttggtaatcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttatgctggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgactaacagagcgttgatt-----tatctg----tttgta-ggttttgttccac-----tcactaa--------------ttgtacggttcac-acgttgaaatacattttgatcctaaataatagaaa-------atgggcgcccaagtttcaacacaaaaatctgggtcgcacgagacaaggaatgtagcatctg-aagggtccaccatcaacttcaccaatatcaattactataaggactcttatgcagcgtcggctagtagacaggactttgcacaagatcctgcaaaattcacacgtcctgtcttagatgcaatcagggaggccgccgctccgttacaatccccttctgttgaggcatgcggttatagtgaccgagtcgcacagttgactgtgggcaactcgaccatcaccacccaagaggcagctaacatagtattgagctatggagagtggccagaatactgtccctctacggacgctacagctgtggataaacccactcgccctgacgtgtcagtaaacaggttctatacactgtcaaccaagagctggaagacag------------------aatctactggttggtactggaagttccctgatgtactaaacgacacaggggttttcggtcaaaacgctcaatttcactacctgtatcgctcgggcttctgcatgcatgttcaatgtaatgcgagcaaattccatcagggggccctcttggtagccgcaatccccgaattcgtgattgctgcaagcagccctgccaccaaacctaatggacaagggttgtacccagatttcgctcatactaacccaggcaaagatggtcaagagttccgggatccttatgtcttagacgctggaatccctctaagtcaagcactagtttttccccaccaatggatcaacctacgaactaacaactgtgcaaccattattatgccttatgtcaacgcgcttccatttgactcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttgaaatactgcaatggggccaccacagaggtgccaatcacactaactatagccccacttaattcagagttcagcggtctccgacaagcaataaaacaagggttccccacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccgccaatactaccaggttttgaaccaactccgttgattcacattcctggtgaattcacttctttattggatttgtgtcaagtggagaccatactagaagttaataa----------t------accaccggcaccactggg------gtcaatagattactaatccctgttcgagcacagaaca------atgtcgaccagttatgtgcctcgttccaagtggaccctgggcgcaatggcccatggcaatccacaatggttggtcagatctgtaggtactacactcaatggtctggttcccttaaggtaaccttcatgtttacaggttcttttatggccacagggaaaatgttaatagcctatacaccacctggtagtgctcagcctgctacaagggaagcagcaatgcttggaacgcatatagtgtgggattttgggttacaatcatcggttactttagtcataccctggattagtaacacccattttagggcggttaagactggaggggtgtacgactactacgcgaccgggatcgtcaccatttggtaccagaccaacttcgtagtaccaccagatacccccactgaggctaacatcatagctcttggagcagcacaaaagaactttaccctgaagttgtgtaaggacaccgatgagatccaacaaacagctgaataccaaaacgaccct--------attacaaatgcagtgg---aaagtgctgtaagcgcgctcac--------------tgacaccgcaatatcccgggta--------------------------------accgcagctaatactgcagccagcacccactccctgggtacaggacgtgtgcctgcattgcaagccgcagaaacgggagcaagttctaactctagtgatgagaatcttatcgagactcgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggaacacttttactctcgtgcggggctggtaggagttgtggaggtgaaggactcgggtactaa----cctaaatggatatacagtgtggcctatagacgtgatgggttttgtacaacagcggcgcaaattagagctatcaacatacatgcgctttgatgctgagttcacttttgtgtccaacctcaataatagtacgactcctggaatgctattgcagtatatgtatgtaccgccaggggcccctaagccggatagtagaaaatcataccaatggcagactgctaccaacccgtcggtattcgcgaaattgagtgacccacccccccaggtgtcagtcccgttcatgtctccagcgacagcttaccagtggttttatgatggttaccctacattcggtgagcacaagcaagccactaatttgcaatatggacagtgtcctaacaacatgatgggtcattttgccatccgaacagtcagtgagtccaccaccgggaaaaacatccacgttcgggtgtacatgagaattaagcacgtgaaagcttgggtgcctagacccctccgatcccaagcttatatggtcaagaattatccgacatatagccaaac----aataactaacactgcaactgaccgcgcaagcataac---caccacggattatgaaggtggggtgcctgcaaatccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggagctatctatgtgggtaactttagagtggtaaaccgacatctcgctactcacaatgactgggcgaatttggtatgggagagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgataccattgctcggtgtaattgtcaaacaggagtgtattactgtaactctagaaggaagcactacccagtcagcttctcaaagcctagccttgtctttgtggaagctagtgagtattatcctgctaggtatcagtcgcacctcatgcttgcggaaggacattcagagcccggggactgtggtggtattcttaggtgccagcacggtgtaattggtatcgtgtccaccggtggtaatggactggtcggatttgcagatgtcagagatcttttatggttagatgaggaagccatggaacagggtgtgtctgattacatcaaa-gggctcggtgatgctttcggaactggttttactgatgcagtgtctagggaagttgagactcttaaaaactaccttgtgggatctgaaggggctgtcgagaagatcttgaaaaatttggttaaattgatctcagcgctagttatagtgatcaggagtgattatgacatggtaaccctcacagcaaccttagcactcattggatgtcacggcagtccctgggcgtggattaaggctaaaacagcatccattttgggtatccctatcgcccagaagcagagcgcatcatggcttaagaagtttaacgacatggccagcgctgccaagggattcgagtggatctctaataagattagcaaatttatagactggctcaaggagaaaattgtaccagcagctaaagagaaagtcgagtttttgagtaacctaaaacaactacca-ttgctggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagatcttgaggcgatgtttgggaacgtgtcgtacctcgcaca---------cttctgccgcaagtaccagccactttacgccacagaggccaaaagagtctatgctctggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgagcctgtatgtctcatcatcagaggttccccaggtactggaaagtccttggcaactggtatcattgctcgagcaatagctgacaaataccactctagtgtgtattcactcccaccggatccagaccactttgatggttacaaacagcaagtagtcacagttatggatgatttatgccagaatcctgatggcaaggatatgtcgctcttctgccagatggtatctactgtggactttatcccaccaatggcttccttagaagagaaaggtgtttcgttcacatctaaatttgtcattgcatccaccaacgccagtaacatcattgtaccaacagtgtccgactcagatgccatacgccgcaggttctatatggactgtgatatcgaggtcacagactcgtacaaaacagatctcggtagattggacgctgggcgggccgctaaactgtgttcagaaaacaacacagcaaactttaaacgatgcagcccactagtgtgtgggaaagctatccagctaagagacagaaaatctaaagtcaggtatagtgtggacactgtggtttccgaactcataagagagtacaacaatcggtccgccattggaaacacaattgaagctttgttccagggcccacccaaatttagacccatgaggatc---agccttgaggagaaaccagctcccgacgccattagtgaccttctcgccagtgtggacagcgaggaagtgcgtcagtactgt-agagatcagggttggatcattccagagactcctaccaatgttgagcggcatctcaacagggctgtgttaatcatgcaatctattgccacagttgtggcagttgtctcattggtgtatgtcatctacaaactctttgctgggttccaaggtgcatactctggtgctcctaaacaggccctcaagaagcccatccttcgcacggcaacagtgcagggcccaagtctcgacttcgccttatcattactaaggaggaatatcaggcaagtccagacagatcaaggacacttcacaatgctgggtgtcagggaccgcttagctgtcctaccacgccactcgcaacctggaaaaacaatttgggtggagcacaagcttgtgaacgtcctggacgccgtcgagctggtagacgagcaaggggttaacctagagctaaccttagtcacccttgataccaatgagaaattcagagatatcaccaaatttattccagaaagtatcagtgctgctagtgatgccactctagtaatcaacacagaacacatgccttcaatgtttgtgccagtaggtgatgttgtacagtacggctttctaaatcttagtgggaagcccactcaccgcactatgatgtataacttccctactaaagcaggacagtgtgggggagtggtgacatcagttggaaaggttattggcatccacataggaggtaatggcaggcaaggtttctgcgcaggactcaagaggagctattttgctagtgaacaaggggagattcaatgggtaaaacctaataaagagactggaagactcaacatcaatgggccaactcgcaccaaactcgagcccagtgtgttctatgacatctttgagggcgataaagaaccggcggttttacacagcaaagaccctcgccttgaggtagattttgagcaggccctgttctctaagtatgtaggaaacacgctgcacgagcctgatgaatacattaaggaggcagccctccactatgcaaatcagttgaagcagctagatatagatacctctcaaatgagcatggaggaagcttgctatggcactgacaaccttgaagctattgaccttcacactagcgcaggttacccctacagtgccttgggaataaagaagagagacatcttggaccccatcactagagatgtaactaagatgaaattctatatggataagtatggacttgatctcccttattccacctatgttaaggatgagctccgctcgattgataagattagaaagggaaaatcccgcttgattgaagctagcagtttgaatgactcagtttacctaagaatggcttttggacacctttacgaaactttccatgcaaaccctgggactgtgactggttcagctgtggggtgcaatccagatgtgttttggagtaagttaccaatcctactccctggttccctctttgcttttgactattcgggctatgatgctagcctcagcccagtttggtttagagcactggagctagtccttagagaagtgggctatagtgaggaggcagtctcgctcattgaagggattaaccacacgcaccatgtgtaccgcaacaaaacctattgcgtgcttggtgggatgccctcgggttgttcaggaacatccatcttcaattcaatgatcaataacatcattattagagcattactcattaagacatttaagggtatcgacctggatgaactcaaaatggtcgcctacggggatgacgtactcgccagttacccattcccaattgattgcctagaactagcaagaacaggcaaagagtatggtctgactatgacccctgcagacaagtctccttgcttcaatgaggttaattgggagaatgcaaccttcctcaagagaggtttcttgcctgacgagcaattcccatttttgattcaccccaccatgccgatgaaagaaatccacgaatctatccggtggactaaggatgcacgtaacactcaagatcacgtgcgatccttatgcttattggcgtggcacaacggcaggcaagaatatgaaaaatttgtgagcactattaggtccgtcccagtaggaaaagcattggctatccctaattatgaaaatctgagacgcaattggctcgaactatttt-----agaggttaatt-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-agtagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ964234.1_Human_coxsackievirus_A6_strain_HN421_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccactcaca-gggcccac-t-gggcgctagcacactgattctccggtacctttgtgtgctt-g-ttttagt-----atccc---t---cccc-c-----aaactcgtaacttagaaga------------ataacacgctatc-gatcaa-tagcaggcatggcgcaccagccatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-taacgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtaacaccattgaaactgcagagcgtttcgctcagca--cta-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtga-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggataatcctaactgcggagcgcatgccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttatactggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgatt-----tacctg----tttgtg-ggttttgttccac-----tcaccaa--------------ttgtacagttcat-actttgaagtatattctaatcctgaataatagaaa-------atgggcgcccaagtttcaacacaaaaatctgggtcgcacgagacaaggaatgtagcaactg-aagggtccaccatcaacttcaccaatattaactactataaggactcttatgcggcgtcggctagtagacaggactttgcacaagatcctgcaaagttcacacgtcctgtcttagatgcaattagagaggccgccgctccgctacaatccccttctgtcgaagcatgcggttatagtgaccgagtcgcacaattgactgtgggcaactcgaccatcaccacccaagaggcagctaatatagtattgagctatggagagtggccagaatactgtccttccacggacgctacagctgtggacaaacctactcgccctgacgtgtcagtgaacagattttatacactgtcaaccaagagctggaagacag------------------aatctactggctggtattggaagttccctgatgtactaaatgacacaggagttttcggtcaaaatgctcaatttcactacctgtaccgctccggcttctgcatgcatgttcaatgtaatgcgagcaaattccatcagggggccctcttggtagccgcaatccctgaatttgtgattgctgcaagcagccctgccatgaagcctaatggacaagggttgtacccggattttgctcatactaacccaggcaaaggtggtcaagagttccgggatccttatgtcttggatgctggaattcctctaagccaagcactaatttttccccatcagtggatcaacctacggactaacaactgtgcgaccatcattatgccatatgtcaacgcgcttccattcgactcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttgaaatattgtaatggagccaccacagaggtgccaatcacactaactatagccccactcaattcagagtttagcggtctccgacaagcaataaaacaagggttccccacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccgccaatactaccaggttttgaaccaactccattgattcacattcctggcgaattcacctctttattagatttgtgtcaagtggagaccatactagaagtcaataa----------t------actaccggtaccactggg------gtcagtagattgctaatccctgttcgagcgcagaata------atgtcgaccagttatgtgcctcgttccaagtggatcctgggcgcaatggcccatggcaatccacaatggttggtcaaatctgcaggtactacactcaatggtctggttcccttaaggtaactttcatgtttacaggttcttttatggctacagggaaaatgttgatagcctacacaccacctggtagtgctcagcctgccacgagggaagcagcaatgcttggaacgcatatagtgtgggattttgggttacaatcatcagttactctagtcataccctggattagtaacactcattttagggcggttaagactggaggggtgtacgactactacgcgaccgggattgtcaccatttggtaccagaccaacttcgtagtaccaccagacacccccactgaggctaacatcatagctcttggagcagcacaaaagaactttaccctgaagttgtgtaaggacaccgatgaggtccaacaaacagctgaatatcaaaacgatcct--------attacgaatgcagtgg---aaagtgctgtaagcgcgctcgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagctaacaccgcagccagtacccactccctgggtacaggacgtgtgcctgcactgcaagctgcagaaacgggagcaagttctaactctagtgatgagaatctcatcgaaactcgctgtgtgatgaatcgaaacggggtcaatgaggcgagtgtggaacacttttactctcgtgcggggctggtaggagttgtggaggtgaaggactcgggcactag----cctagatgggtatacagtgtggcctatagacgtgatgggttttgtgcaacagcggcgcaaactagagctatcaacatacatgcgctttgatgctgagttcactttcgtgtccaacctcaatgatagtacaacccctggaatgctattgcagtatatgtatgtaccaccaggagcccccaagccggatagtagaaaatcataccaatggcagactgctaccaacccgtcggtattcgcaaaattgagcgatccacccccccaggtgtcagtcccgtttatgtctccagcgacagcttatcagtggttttatgatggttaccctacgttcggtgagcacaagcaagccactaacttgcagtatggacagtgtcctaataacatgatgggacattttgccatccgaacagtcagtgagtccaccaccgggaaaaacatccacgttcgggtgtacatgagaatcaaacacgtgagagcttgggtgcctaggcccctccgatcccaagcttacatggtcaagaattatccaacatatagccagac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggcggggtgcctgcaaacccgcaaagaacatctggt------------------------------------------aagtttggccaacaatccggggctatctatgtgggtaactttagagtggtaaaccgacatcttgctactcacaatgactgggcaaatttggtatgggagagtagctcacgagatcttctggtgtcctccactactgctcaaggatgtgataccattgctcggtgtaactgtcaagcaggagtgtattactgcaactccagaaggaagcactacccagtcagcttctcaaagcctagccttgtcttcgtggaagctagtgagtattaccctgccaggtatcagtcgcacctcatgcttgcggaggggcactcagagcccggggactgtggtggtatccttaggtgccagcatggcgtgataggtattgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttatggttggatgaagaagccatggaacagggtgtgtctgattacatcaaa-gggctcggtgatgctttcggaactggtttcactgacgcagtgtctagggaagtcgaggcccttaaaaactaccttgtgggatctgaaggggcagtcgagaagattttaaaaaatttgattaaattgatttcagcactagttatagtgatcaggagtgattatgacatggtaaccctcacagcaaccttagctctcattggatgtcacggcagtccctgggcgtggatcaaggctaaaacagcatccattctgggtatcccaatcgcccagaagcagagcgcatcatggcttaagaagtttaatgatatggccagcgctgctaagggactcgagtggatctctaataagattagtaaatttatagactggctcaaggagaaaatagtaccagcagctaaagagaaggtcgagttcttgagtaacctaaaacaactacca-ttgctggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagacctcgaggcgatgtttgggaacgtgtcgtacctcgcgca---------cttctgccgcaagtaccagccactttacgccttagaggccaaaagagtctatgctctggaaaagaggatgaacaatcacatgcagttcaagagcaaacaccgtattgagcctgtatgtctcattatcagaggttccccaggtaccggaaagtccttggcaactggtatcattgcccgagcaatagctgacaagtaccattctagtgtgtattcacttccaccggatccagaccactttgatggttacaaacagcaagtggtcacagttatggatgatttatgtcagaatcctgacggcaaggatatgtctcttttctgtcagatggtatctactgtagacttcattccaccaatggcttccttagaagagaaaggtgtttcatttacatctaaatttgtcattgcatccaccaacgccagtaatatcattgtaccaacagtgtccgactcagatgccatacgtcgcaggttctatatggactgcgatatcgaggtcacagactcatacaaaacagacctcggtagattggacgctgggcgggccgctaaactatgctcagaaaacaacacagcaaactttaaacgatgtagcccactagtatgtgggaaagctatccagttgagagacaggaagtccaaagttaggtacagtgtggacacagtggtctccgaactgattagagagtacaacaaccggtccgcaattggaaacacaattgaagctttgttccagggcccacccaaatttaggcccattaggatc---aaccttgaggagaagccagctcccgacgccattagcgatcttcttgccagtgtggacagcgaggaagtgcgtcagtactgt-agaaatcagggttggatcatcccagagactcctaccgatgttgagcggcatctcaacagggctgtgttaatcatgcaatctattgccacagttgtggcagttgtctcattggtgtatgtcatctacaaactctttgctgggttccaaggtgcatactctggtgttcccaaacaggccctcaagaagcctatcctccgcacggcaacagtgcagggcccaagtctcgatttcgccttatcgttattgaggagaaatatcagacaagtccagacagaccaaggacacttcacaatgctgggtgtcagggaccgcctagctgtcctaccacgacactcgcaacctggaaagacaatttgggtggagcacaagcttgtagacgtcctggacgccgtcgagctggtggatgagcaaggagttaacctagagctaaccttagtcacccttgataccaatgagaaattcagagacatcaccaaatttattccagaaagtatcagcgccgctagcgatgccactctagtgattaacacagaacacatgccttcaatgtttgtgccagtaggtgatgttgtacagtatggttttctaaaccttagtgggaagcctactcaccgcaccatgatgtataatttccctactaaagcaggacagtgtggaggagtggtgacatcagttggaaaggttattggcatccacatagggggtaatggcaggcaaggtttctgcgcaggactcaagaggagctattttgctagtgaacaaggggagatccagtgggtaaaacctaatagagagactggaagactcaacatcaatgggccaactcgcaccaagctcgagcccagtgtgttccatgacgtctttgagggcaataaggaaccagcggttttacacagcaaagaccctcgccttgaggtagattttgagcaagccctgttctctaagtacgtaggaaacatgctgcacgagcctgatgaatacattagggaggcagccctccactatgcaaatcagttgaagcagctagatatagatacctctcagatgagtatggaggaagcttgctatggtacagacaacctcgaagctattgaccttcacactagcgcaggctacccctacagtgccttgggaataaagaagagagacatcttggaccccactactagagatgtaaccaagatgaaattctatatggataagtatggacttgatcttccatattccacctatgtcaaagacgagcttcgctcgatagacaagatcaagaaagggaaatctcgtctgattgaggccagcagtttgaatgactcagtctatctcaggatgactttcggacacctctatgaaactttccatgcaaaccctgggactgtgactggctcggctgtggggtgcaacccagatgtgttttggagcaagctaccaattctgctccccggttccctctttgcctttgactattcaggctacgatgctagcctcagtccagtctggtttagggcactggaattagtccttagagagataggctatagtgaggaagcggtctcgctcattgaagggatcaaccacacgcaccatgtatatcgcaataaaacttattgcgtacttggtgggatgccctcgggctgttcaggaacatccatcttcaattcaatgatcaataatattatcatcagagcactactcatcaagacattcaagggcatcgatttggatgaactcaacatggttgcctatggggacgatgtgctcgctagctaccctttcccaattgactgcctagaactagcaagaacaggtaaggagtatggtcttactatgacccctgcggataagtccccgtgctttaatgaagtcaattgggagaatgcaacttttcttaagaggggtttcctgcctgatgatcaatttccattcttgattcaccctaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgtaacactcaagatcatgtgcggtccctgtgcctgttagcgtggcacaacggcaagcaagagtatgaaaaatttgtgagcacaattaggtctgtcccaataggaaaagcattggcaattcccaattatgaaaatctgaggcgcaattggcttgaattatttt-----agaggttaaac-------------------------acac---------------ctgaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT779410.1_Coxsackievirus_A6_isolate_Changchun046/CHN/2013_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacctaca-gggcccac-t-gggcgctagcacactgattctacggaatctttgtgcgcct-g-ttttagt-----acccc---t---cccc-c-----aaactcgtaacttagaaga------------atggcacgctatc-gatcaa-tagcaggcatggcgcaccagccatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-taacgcggttgaaggagaaaacatccgttacccggctaactacttcgagaaacc-cagtaacaccatttaaactacggagtgtttcgctcagca--cta-cccca---gtgtagatcaggtcgatgagtcactgca-ttccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtga-cccataggacgctctaaagtggacatggtgcg-aacagtctattgagctagttagtagtcctccggcccctgaatgcggataatcctaactgcggagcgcatgccctcaatcca-ggggg-ttgtgcgtcgtaacgggcaattctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcctatactggctgcttatggtgacaattgaa-------agattgttaccatatagctattggattggccatccag--tgaccagtagagctttgatt-----tacctg----tttgtg-ggttttgttccac-----tcaccaa--------------ttgtgcagttcat-actctgaagtacattttaatcctgaataatagaaa-------atgggcgcccaagtttcaacacaaaaatctgggtcgcacgagacaaggaatgtagcaactg-aaggatccaccatcaacttcaccaatattaactactataaggactcttatgcggcgtcagctagtagacaggattttgcacaagatcctgcaaagttcacacgccctgtcttggatgcaatcagggaggccgccgctccgctacaatccccttctgtcgaggcatgcggttacagtgaccgagtcgcacagctgaccgtggggaactcgaccatcaccacccaagaggcagctaacattgtattgagctatggagagtggccagaatactgtccttctacggacgctacagctgtggacaaacctactcgccctgacgtgtcagtgaacagattttatacactgtcaaccaagagctggaagacag------------------aatctactggctggtattggaaattccctgatgtactaaacgatacaggggttttcggtcaaaacgctcaatttcactatctgtaccgttcgggtttctgtatgcatgttcaatgtaatgcaagcaaattccatcagggggccctcttggtagccgcaatccctgaatttgtggttgctgcaagcagccctgccacgaaacctaatggacaagggttgtacccagactttgctcatactaacccgggcagaggtggtcaagagttccgagatccttatgtcctggatgctggaatccctttaagccaagcactaatttttccccatcagtggattaacttacgaactaacaactgtgcaaccattattatgccatatgttaatgcgcttccattcgactcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttgaaatattgtaatggagccaccacagaggtgccaattacactaactatagccccacttaattcggagttcagcggtctccgacaagcaataaaacaagggttccccacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccaccaatactaccaggttttgaaccaactccattgattcacatccccggtgaattcacctctttattagatttgtgtcaggtggagaccatattagaagtcaacaa----------t------actaccggtaccactggg------gtcagtagattgctaatccctgttcgagcacagaata------atgtcgaccagttatgtgcctcgttccaagtggatcctgggcgcaatggcccatggcaatcaacaatggttggtcaaatctgtaggtactacactcagtggtctggttcccttaaggtaactttcatgtttacaggttcttttatggccacagggaaaatgttgatagcctacacaccacctggcagtgctcagcccgccacgagggaagcagcaatgcttggaacgcatatagtgtgggattttgggttacaatcatcagttaccctagtcataccctggattagtaacactcattttagggcggttaaaactggaggggtgtacgactactacgcgaccgggattgtcactatctggtatcagaccaatttcgtggtaccaccagatacccccactgaggctaacatcatagctcttggagcagcacaaaagaactttaccctgaagctgtgtaaggacaccgatgagatccaacaaacagctaaataccagaacgatcct--------atcacgaatgcagtgg---aaagtgctgtaagcgcactcgc--------------tgacaccacaatatcacgggtg--------------------------------accgcggctaacaccgcagccagtacccactccctgggtacaggacgcgtgcctgcactgcaagctgcagaaacgggagcaagttctaactctagtgatgagaatctcattgaaactcgctgtgtgatgaatcgaaacgggatcaatgaggcgagtgtggaacacttttactctcgtgcggggctagtaggagttgtggaggtaaaggactcgggtactag----cctagatgggtatacagtgtggcctatagacgtgatgggttttgtgcaacagcggcgcaagctagaactatcaacatacatgcgctttgacgctgagttcacttttgtgtccaacctcaatgatagtacaacccctggaatgctattgcaatatatgtatgtaccaccaggagcccccaagccggatagtagaaaatcataccaatggcagactgctaccaacccgtcggtgttcgcaaagctgagtgatccacccccccaggtgtcagtcccgtttatgtccccagcgacagcttatcagtggttttatgatggctacccaacattcggtgagcacaaccaagctactaatctgcagtatggacagtgtcctaacaacatgatgggacattttgccatccgaacagtcagtgagtccaccactgggaaaaacatccacgttcgggtgtacatgagaatcaaacacgtaagagcctgggtgcctaggcccctccgatcccaagcttacatggtcaagaattatccaacatatagccagac----aataactaacactgcaaccgaccgtgcaagcataac---taccacggattatgaaggtggggtacctgcgaatccgcaaagaacatctggt------------------------------------------aagtttggccaacaatccggggctatctatgtgggtaactttagagtggtaaaccgacatcttgctactcacaatgactgggcaaatttggtatgggagagtagctcacgagatcttctggtgtcctccaccactgcccaaggatgtgataccattgcccggtgtaactgtcaaacaggagtgtattactgtaactctagaaggaagcactatccagtcagcttctcaaagcctagccttgtcttcgtggaagctagtgagtattatcctgccaggtaccagtcgcacctcatgcttgcggtaggacactcagagcccggagactgcggtggtatccttaggtgtcagcatggtgtggtgggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttatggttggatgaagaagccatggaacagggtgtgtctgattacattaaa-gggctcggtgatgcttttggaactggttttactgatgcagtgtctagggaagtcgaggcccttaaaaactaccttgtgggatctgaaggagctgtcgagaagatcttgaaaaatttgattaaattgatctcagcgctagttatagtgatcaggagtgattatgacatgataactctcacagcaaccttagcactcattggatgtcacggcagtccctgggcatggatcaaggctaaaacagcatccattttgggcatccctatcgcccagaagcagggcgcatcatggcttaagaagtttaatgacatggccagcgctgctaaggggttagagtggatctctaataagatcagcaaatttatagactggctcaaggagaaaatagtaccagcagctaaagagaaggtcgagtttctgagcaacctaaagcaattacca-ttgctggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagatcttgaggcgatgtttgggaatgtgtcgtacctcgcgca---------cttttgccgcaagtaccagccactttacgcctcagaggccaaaagagtctatgctctggaaaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcattatcagaggctcaccaggcactggaaaatctttggcaaccggcatcatcgcccggtcgatagctgataagtatcactctagtgtgtattccctcccaccagacccggatcactttgatggatacaaacaacaggtagttaccgttatggatgacttatgccagaaccctgacggtaaggacatgtctttgttctgtcaaatggtatccactgtggacttcatccctccaatggcttccctcgaggaaaaaggggtgtctttcacctctaaatttgtcatcgcatccaccaatgccagcaacatcatagtgccgacagtgtcagattctgacgccattcgtcgcagattttatatggactgtgacattgaggtgacggattcatataaaacagacttgggcagattggatgccagtcgggccgccagactgtgctctgaaaacaacactgccaacttcaaacgctgcagccctctggtgtgtgggaaagctattcagctcagagacaggaagtctaaggttagatatagcgtggatacagtggtgtctgagctcattagggagtacaacaatagatctgccattggaaatacaattgaagccctgttccaaggaccacccaagtttaggccaattaggatc---agcctcgaggagaagccagccccagatgctattagtgaccttcttgccagcgtggatagcgaggaggtgcgtcagtactgc-agggaccaaggttggatcatcccagaggctcccacaaatgttgaacgacacctcaacagagccgtactgatcatgcagtctattgccacaatagtagcggttgtctctttggtgtatgttatctacaagctctttgctgggttccaaggtgcttactctggcgcccctaagcaggtgctcaggaaacctgttctccgcacggcaacagtgcagggcccaagtctcgactttgctttatcactattgagaaggaatatcaggcaagtccagacggaccaagggcacttcaccatgttgggagttagagatcgcttagctgtcctcccgcgacactcacaacctggaaaagcaatctggatagagcataagcttgtgaacattctggatgctgtcgaactagtggatgagcaaggggtcaatttagagctaaccttagtcaccctagacaccaatgaaaagtttagggacatcactaaattcattccagaaagtatcagcgctgctagtgacgccactttagtgatcaacacagagcatatgccttcaatgtttgtgccagtaggtgatgtcgtgcagtatggctttctgaacctcagtggaaagccaactcaccgcactatgatgtacaactttcctactaaggcaggtcagtgcggaggagtggtcacgtcggttgggagagtcattggcattcacataggaggtaatggcaggcaaggtttctgtgcgggactcaagaggagctattttgctagtgagcaaggagagatccaatgggtcaaacctaataaagaaacagggaggctaaacatcaatggaccaacccgcactaaactcgaacccagtgtattccatgatgtctttaagggcaacaaggagccagcagttttgcatagtaaagaccctcgcctcgaggtggatttcgagcaggcattattctccaagtacgtggggaacacactacatgagcctgatgagtatgtcagagaggcagcccttcactatgcaaaccaattgaagcgtctagacatagacaccacccgaatgagcatggaggaggcgtgctacggcacagataaccttgaggctattgacctccacactagcgcaggttacccttacagtgctctgggaataaaaaagagagatatcctagaccctaccactagagatgtgagcaagatgaagttctacatggataaatatggccttgacctcccttactccacctatgtcaaagatgagcttcgctcaatagacaagatcaagaaagggaaatctcgactgattgaagccagcagtttgaacgattcggtatacctcagaatggcctttgggcacctctatgaaaccttccatgcaaaccctggaactgtgactggctcagctgtggggtgcaacccagatgtattttggagtaagctaccaatcttgctccctggttccctctttgctttcgactactcaggttatgatgctagtctcagcccagtttggttcagggcactggagctagtcctaagagagataggctatagtgaggaggcgatctcgcttatcgaaggaatcaaccacacgcatcatgtataccgcaacaaaacttattgtgtgcttggtgggatgccctcgggttgttcaggtacatccattttcaactcaatgattaacaacattatcattagaacactcctcattaagacattcaagggtattgatttggatgaactcaatatggttgcctacggggacgatgtgctcgccagttaccccttccctattgactgcctagaactagcaagaacaggtaaggagtatggtttgaccatggcccccgctgataagtcctcttgcttcaatgaagttaattgggaaaatgcaacctttcttaagcgaggtttcttgcccgatgatcaattcccgttcttgatccaccctaccatgccaacggaggagatccatgaatccattcggtggaccaaggatgcacgtaatactcaagatcacgtgcgatccttatgcttattggcgtggcacaacggcaagcaagagtatgaagagtttgtgagcataattaggtctgtcccagtaggaaaagcattagcaatccccaactatgaaaatctgagacgcaattggctcgaattatttt-----agaggctagac-------------------------acac---------------ctcaaccc-cactagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM279379.1_Coxsackievirus_A6_strain_CA6/CC13/57_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctacggaatctttgtgcgcct-g-ttttagt-----acccc---t---cccc-c-----aaactcgtaacttagaaga------------atggcacgctatc-gatcaa-tagcaggcatggcgcaccagccatgtctaga-tcaagcacttctg-tctccccggattgagtatcaatagactgc-taacgcggttgaaggagaaaacatccgttacccggctaactacttcgagaaacc-cagtaacaccatttaaactacagagtgtttcgctcagca--cta-cccca---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtga-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggataatcccaactgcggagcgcatgccctcaatcca-ggggg-ttgtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatactggctgcttatggtgacaattgaa-------agattgttaccatatagctattggattggccatccag--tgaccagcagagctttgatt-----tacctg----tttgtg-ggttttgttccac-----tcaccaa--------------ttgtgcagttcat-actctgaagtacattttaatcctgaataatagaaa-------atgggcgcccaagtttcaacacaaaaatctgggtcgcacgagacaaggaatgtagcaactg-aagggtccaccatcaacttcaccaatattaactactataaggactcttatgcggcgtcggctagtagacaggattttgcacaagatcctgcaaagttcacacgccctgtcttggatgcaatcagggaggccgccgctccgctacaatccccttctgtcgaggcatgcggttatagtgaccgagtcgcacagctgaccgtggggaactcgaccatcaccacccaagaggcagctaacattgtattgagctatggagagtggccagaatactgtccttccacggacgccacagctgtggacaaacctactcgccctgacgtgtcagtgaacagattttatacactgtcaaccaagagctggaagacag------------------agtctactggctggtattggaaattccctgatgtactaaacgacacaggagttttcggtcaaaacgctcaatttcactatctgtaccgctcgggtttctgcatgcatgttcaatgtaatgcaagcaaattccatcagggggccctcttggtagccgcaatccctgaatttgtggttgctgcaagcagccctgccacgaaacctaatggacaagggttgtacccagactttgctcatactaacccaggcaaaggtggtcaagagttccgagatccttatgtcttggatgctggaatccctctaagccaagcactaatttttccccatcagtggattaacttgcgaactaacaactgtgcaaccattattatgccatatgttaatgcgcttccatttgactcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttgaaatattgtaatggagccaccacagaggtgccaattacactaactatagccccacttaattcagagttcagcggtctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcagtttcttacaactgatgacgggacatccccgccaatactaccaggttttgaaccaactccattgattcacatccccggtgaattcacctctttattagatttgtgtcaggtggagaccatactagaagtcaacaa----------t------actaccggtaccactggg------gtcagtaggttactaatccctgttcgagcacagaata------atgtcgaccagttatgtgcctcgttccaagtggatcctgggcgcaatggtccatggcaatcaacaatggttggtcaaatctgtaggtactacactcagtggtctggttcccttaaggtaactttcatgtttacaggttcttttatggctacagggaaaatgttgatagcctacacaccacctggcagtgctcagcccgccacgagggaagcagcaatgcttggaacgcatatagtgtgggattttgggttacaatcatcagttactctagtcataccctggattagtaacactcattttagggcggttaagactggaggggtgtacgactactacgcgaccgggattgtcactatctggtatcagaccaacttcgtagtaccaccagatacccccactgaggctaacatcatagctcttggagcagcacaaaagaactttaccctgaagttgtgtaaggacaccgatgaaatccaacaaacagctgtataccagaacgatcct--------atcacgaatgcagtgg---aaagtgctgtaagcgcactcgc--------------tgacaccacaatatcccgggtg--------------------------------accgcggctaacaccgcagccagtacccactccctgggtacaggacgcgtgcctgcactgcaagctgcagaaacgggagcgagttctaactctagtgatgagaatctcattgaaactcgctgtgtgatgaatcgaaacgggatcaatgaggcgagtgtggaacacttctactctcgtgcggggctggtaggagttgtggaggtaaaggactcgggtactag----cctagatgggtatacagtgtggcctatagacgtgatgggttttgtgcaacagcggcgcaagctagaactatcaacatacatgcgctttgacgctgagttcacttttgtgtccaacctcaatgatagtacaacccctggaatgctattgcaatatatgtatgtaccaccaggagcccccaagccggatagtagaaaatcataccaatggcagactgctaccaacccgtcggtgttcgcaaagttgagtgatccacccccccaggtgtcagtcccgtttatgtccccagcgacagcttatcagtggttttatgatggctacccaacattcggtgagcacaaccaagccactaatctgcagtatggacagtgtcctaataacatgatggggcattttgccatccgaacagtcagtgagtccaccactgggaaaaacatccacgttcgggtgtacatgaggatcaaacacgtaagagcctgggtgcctaggcccttccgatcccaagcttacatggtcaagaattatccaacatatagtcggac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggtggggtacctgcgaatccgcaaagaacatctggt------------------------------------------aagtttggccaacaatccggggctatctatgtgggtaactttagagtggtaaaccgacatcttgctactcacaacgactgggcaaatttggtatgggagagtagctcacgagatcttctggtgtcctccaccactgcccaaggatgtgataccattgcccggtgtaactgtcaaacaggagtgtattactgtaactctagaaggaagcactacccagtcagcttctcaaagcctagccttgtcttcgtggaagctagtgagtattatcctgccaggtaccagtcgcacctcatgcttgcggtaggacactcagagcccggagactgtggtggtatccttaggtgccagcatggtgtgataggtatcgtgtccactggtggtaatggacttgtcggatttgcagatgtcagagatcttttatggttggatgaagaagccatggaacagggtgtgtctgattacattaaa-gggctcggtgatgcttttggaactggttttactgatgcagtgtctagggaagtcgaggcccttaaaaactaccttgtgggatctgaaggagctgtcgagaagatcttaaaaaatttgattaaattgatctcagcgctagttatagtgatcaggagtgattatgacatggtaactctcacagcaaccttagcactcattggatgtcacggcagtccctgggcatggatcaaggctaaaacagcatccattttgggcatccctatcgcccagaagcagggcgcatcatggcttaagaagtttaatgacatggccagcgctgctaaggggttagagtggatctctaataagatcagtaaatttatagactggctcaaggagaaaatagtaccagcagctaaagagaaggtcgagtttctgagcaacctcaaacaattacca-ttgctggaaaaccaaatctcaaacttggaacagtccgccgcttcacaagaagatcttgaggcgatgtttgggaatgtgtcgtacctcgcgca---------cttttgccgcaagtaccagccactttacgccttagaggccaaaagagtctatgctctggaaaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcattatcagaggctcaccaggcactggaaaatctttggcaaccggcatcatcgcccggtcaatagctgataagtatcactctagtgtgtattccctcccgccagacccggatcactttgatggatacaaacaacaggtagttaccgttatggatgacttatgccagaaccctgacggtaaggacatgtctttgttctgtcaaatggtatccactgtggacttcatccctccaatggcttccctcgaggaaaaaggggtgtctttcacttctaaatttgtcatcgcatccaccaatgccagcaacatcatagtgccaacagtgtcagattctgacgccattcgccgcagattttatatggactgtgacatcgaggtgacggattcatataaaacagacttgggcagattggatgccggtcgggccgccaggctgtgctctgaaaacaacactgccaacttcaaacgctgcagccctctggtgtgtgggaaagctattcagctcagagacaggaagtctaaggttagatatagcgtggatactgtggtgtctgagctcattagggagtacaacaatagatctgccattggaaatacaattgaagccctatttcaaggaccacccaagtttaggccaattaggatc---agcctcgaggagaagccagccccagatgctattagtgaccttcttgccagcgtggatagcgaggaggtgcgccagtactgc-agggaccaaggttggatcatcccagagactcccacaaatgttgaacgacacctcaacagagccgtactgatcatgcagtctattgccacagtagtagcggttgtctctttggtgtatgttatctacaagctctttgctgggttccaaggtgcttactctggcgcccctaagcaggtgctcaggaaacctattctccgcacggcaacagtgcagggcccaagtctcgattttgctttatcactattgagaaggaatatcaggcaagtccagacggaccaagggcacttcaccatgttgggagttagagatcgcttagctgtcctcccgcgacactcacaacctggaaaagcaatctggatagagcataagcttgtgaacattctggatgctgtcgaactagtggacgagcaaggggtcaatttagagctaaccttagtcaccctagacaccaatgaaaagtttagagacatcactaaattcattccagaaagtatcagcgctgctagtgacgccactttagtgatcaacacagagcatatgccttcaatgtttgtgccagtaggtgatgtcgtgcagtatggttttctgaacctcagtggaaagccaactcaccgcactatgatgtacaactttcctactaaggcaggtcagtgtggaggagtggtcacatcggttgggagagtcattggcattcacataggaggtaatggcaggcaaggtttctgtgcgggactcaagaggagctattttgctagtgaacaaggagagatccaatgggtcaagcctaataaagaaacagggaggctaaacatcaatggaccaacccgcactaaactcgaacccagtgtattccatgatgcctttaagggcaataaggagccagcagtcttgcatagtaaagaccctcgcctcgaggtggatttcgagcaggcattgttctccaagtacgtgggaaacacactacatgagcctgatgagtacatcagagaggcagcccttcactatgcaaaccaattgaagcggttagacatagacaccacccgaatgagcatggaggaggcgtgctacggcacagataaccttgaggctattgacctccacactagcgcaggctacccttacagtgctctgggaataaaaaagagagatatcctagaccctaccactagagatgtgagcaagatgaagttctacatggataaatatggccttgacctcccttactccacctatgtcaaagatgagcttcgctcaatagacaagataaagaaagggaaatctcgactgattgaagccagcagtttgaacgattcggtataccttaggatggcctttgggcacctctatgaaaccttccatgcaaaccctggaactgtgactggctcagctgtggggtgcaacccagatgtattttggagtaagctaccaatcttgctccctggctccctctttgccttcgactactcaggttatgatgctagcctcagcccagtttggttcagggcactggagctagtcctaagagagataggctatagtgaggaagcaatctcgcttattgaaggaatcaaccacacgcaccatgtgtaccgcaacaaaacttattgtgtgcttggtgggatgccctcgggttgttcaggaacatccatcttcaactcaatgattaacaacattatcatcagaacactcctcattaagacattcaagggtattgatttggatgaactcaatatggttgcctacggggacgatgtgctcgccagttaccccttccctattgactgcctagaactggcaagaacaggtaaggagtatggtttgaccatgacccccgctgataagtcctcttgcttcaatgaagttaattgggaaaatgcaacctttctcaagcgaggtttcttgcccgatgatcaattcccgttcttgatccaccctaccatgccaatggaggagatccatgagtccattcggtggaccaaggatgcacgtaatactcaagatcacgtgcgatccttatgcttattggcgtggcacaacggcaagcaagagtatgaagagtttgtgagcacaattaggtctgtcccagtaggaaaagcattagcaatccccaactatgaaaatctgagacgtaattggctcgaattatttt-----agaggctagac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP144347.1_Coxsackievirus_A6_isolate_V16/Ed/UK/2014_polyprotein_gene_partial_cds
--------------------------------------------------------------------------------------------------------------------------------------------------aaact-gtaacttagaaga------------atagtactctatc-gatcaa-tagcaggcatggcgcgccagccatgtctaga-tcaagcacttctg-tctccccggatcgagtatcaatagactgc-tagcgcggtcgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--taacgaacagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtgctgttcat-actctaaagcatattttgattctaaataatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggattcttatgcagcgtcagccagtagacaggattttgcacaagatcccgcaaagttcacacgccctgtcttggacaccattagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaattcaaccattaccacccaagaggcagccaacattgtattgagctacggggagtggccagaatactgtccttccacggacgctacagctgtggacaagcctacccgccctgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgatacaggggttttcggtcaaaacgcccaattccactacttgtaccgctcgggcttctgtatgcacgttcaatgcaatgcaagcaagttccatcagggggccctcttagtggccgcaatccccgaatttgtggttgctgcaagcagccctgctacgaagcctaacggacaagggttgtacccagattttgctcatactaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggacgctggagtccccctaagtcaagcactggtttacccccatcaatggatcaatctacgaactaataactgcgcaaccattattatgccatatgtcaatgcgcttccattcgattcagcgcttaaccactcaaattttggattggttgtaatccctattagccctttaaaatattgtaatggagctaccacagaggtgccaatcacactaactattgccccacttaactcggagtttagcggcctccgacaagcaataaaacaagggtttcctacagaactcaagcctgggaccaatcaatttcttacaactgacgacgggacatccccgccaatactgcccggttttgaaccaactccattgattcacattcctggtgaattcacctctttgttagatttgtgtcaaatagaaaccatactagaagtcaataa----------t------accaccggcaccaccggg------gtcagtagattactaatccccgttcgagcgcagaaca------atgtggaccagttgtgtgcatcattccaagtagatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaggtaacctttatgttcacaggttcctttatggccacagggaaaatgctgatagcctacacaccgcctggtagtgctcaacccgctacaagggaagcagcaatgcttgggacgcatatagtgtgggattttggtttgcaatcatctgtcaccttagttataccttggattagtaacacccattttagagcagttaagactggaggagtatacgactactatgcgaccgggatcgtcactatttggtaccagaccaacttcgtggtgccaccagacacccccactgaggctaacatcatagctcttggagcagcacagaaaaactttaccctaaagttgtgcaaggacactgacgagatccaacaaacagcagagtaccaaaacgatccc--------attacaaatgcagtgg---aaagcgctgtgagcgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagctagcacccactccctaggaacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagctctaatgctagtgatgagaaccttattgagacccgctgcgtgatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcagggctggtaggagttgtggaggtgaaggactcgggcaccag----cctggatgggtacacagtttggcctgtagatgtaatgggcttcgtgcaacagcggcgcaaactagagctgtcaacatacatgcgcttcgatgccgagttcacctttgtgtccaacctcagtgacagctcgacgcccgggatgctgctacagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaattgagtgatccacccccccaggtgtctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaggctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgctatccgaacagttagtgaatctaccaccgggaaaaacgtccacgtccgggtgtacatgagaattaagcacgtaagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacatatagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattatgaaggtggggtgccagcaaacccacaaaggacatctggt------------------------------------------aagtttggccaacagtccggggctatctatgtaggtaactatagagtggtaaaccgacatctcgccactcataatgattgggcaaatttagtatgggaaagtagctcacgagatcttctggtgtcctccaccactgctcaaggatgtgataccattgcccgatgtgactgtcaaacaggagtgtattactgcaactccagaaggaaacactacccggttagtttttctaagcctagcctcgtcttcgtggaagctagtgagtactatcctgccaggtatcagtcgcacctcttgcttgcgaagggacattctgaacccggggactgtggtggtattcttaggtgccaacatggtgtgattggtatcgtgtccactggtggtaatggacttgtcggatttgcagatatcagagatcttttgtggctggatgaagaagccatggaacagggcgtgtcagattacatcaaa-gggctcggtgacgcatttgggactggttttactgatgcagtgtctagagaagtggaagctcttaagaactaccttataggatctgaaggggctgttgaaaagatcttgaagaatttggttaaattgatctcagcactagtcatagtgatcagaagtgattatgacatggtgaccctcacagcaaccttagcactcatagggtgtcatggcagtccctgggcgtggatcaaggctaagacagcatccatcttaggtatccctatcgcccagaagcagagtgcatcttggctcaagaagtttaacgacatggccaatgctgccaagggatttgagtggatttccaataagattagcaaatttattgattggctcaaggagaaaattgtaccagcagctaaagagaaggtcgagtttttgagcaatctaaagcaattacca-ttattggagaatcagatctcaaacctcgagcaatctgcagcatcacaagaagatcttgaagcgatgtttgggaatgtgtcttatctcgcaca---------tttctgtcgcaaattccaaccactctacgctacagaagctaagagggtctatgcactggagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggttccccaggcactggtaagtccttggccactggtatcatcgcccgagcgatagctgacaaataccattctagtgtgtattcgctaccaccagatccagatcactttgatggttacaaacagcaagtggtcacagtcatggatgacttatgtcaaaaccctgacggtaaggatatgtcactattctgtcagatggtgtccactgtggatttcattccaccaatggcctctttagaggagaaaggagtttctttcacatctaaatttgtcattgcatccaccaatgctagtaacatcattgtaccgactgtatctgactcagacgctattcgccgcaggttctacatggactgtgatattgaagtgacagactcatacaaaacagatttgggcagattggacgccgggcgtgctgctaaattatgttctgagaacaatacagcaaacttcaagcgctgcagccccttggtctgtggaaaggctatccaactaagagacaggaaatccaaagtcagatacagtgtagatactgtggtctctgagcttataagagagtacaataacagatctgccattggtaacacaattgaagccttgttccaaggcccgcccaagttcaggcccataaggatt---agccttgaggagaagccaaccccagatgccattagtgatctcctcgctagcgtggatagtgaagaagtgcgtcagtattgt-agagaccaagggtggattattccagagactcctaccaacgtcgagcggcatctgaacagagctgtgctagttgtgcaatctatcgccacagtagtagcggttgtttccttggtgtatgttatctacaaactctttgctggatttcaaggtgcatactctggcgctcccaaacaggtgctcaagaaacctatcctccgcacggcgacagtacagggtccgagccttgattttgctctgtccttactaaggaggaacatcaggcaagtgcaaacagatcaggggcatttcaccatgttaggtgtcagggaccgtctagctgttctcccgcgccactctcaaccaggaaaaacaatctgggtggagcacaaactagtgaacattttggatgcagtcgagctagtggatgagcaaggggtcaatttggaattaaccctaatcacccttgacaccaatgagaaattcagggacatcaccaagtttatcccagaaaacatcagcgccgccagtgatgccaccctagtaatcaacactgaacatatgccctcaatgtttgtaccagtgggtgatgtcgtgcaatacggctttttgaatcttagcgggaagccaacccaccgcaccatgatgtacaactttcccactaaagcaggtcagtgcggaggggtagtgacatcagttggaaaggttattggtatacacataggtggtaatggtagacaaggtttttgtgcaggactcaagaggagttactttgccagtgagcaaggggagatccagtgggttaagtccaataaagagacagggaggctcaatatcaatgggccgactcacacaaagctcgagcccagtgtgtttcatgatgtatttgagggaaacaaggagccagctgtcctgcacagcaaagacccccgtcttgaggtggatttcgagcaagctctgttctccaagtacgtagggaatacactacatgaacctgatgagtacatcaaggaggcagccctccactatgcaaaccagttaaaacggttaaacatcgacacttctcagatgagtatggaggaagcctgttacggtacagagaaccttgaagctattgatcttcacactagtgcaggttacccatatagtgccctgggaataaagaaaagagacatcctagatcctgccactagagatgtgagcaagatgaaattttacatggacaagtatggcttggaccttccttactccacctatgtcaaggacgaacttcgctcagtagataagatcaagaagggaaagtcccgcttaatcgaagccagcagcctcaatgattcagtgtacctcaggatggcttttgggcatctttatgaggccttccacgcaaaccccgggactattaccggctcagccgtggggtgcaacccggatgtgttctggagcaagctaccaattttgctgcctggctcactctttgcctttgactactcgggttacgatgctagcctcagccccgtctggttcagagcattggaactggtccttagagagataggctacagtggggaggcaatctcactcattgaggggattaaccatacacaccatgtgtaccgcaacaaaacttattgtgtgcttggtgggatgccttcgggctgctcgggaacatctatcttcaactcaatgatcaataacatcatcattagagcactgcttatcaaaacatttaagggcattgacctggatgaactcaatatggttgcctacggggatgatgtgcttgccagttatcctttcccaattgactgcttagaactagcaaaaacaggcaaggagtatggcttgactatgactcctgcagacaagtctccctgcttcaatgaagttaactggggtaatgcaacctttctcaaaagaggcttcttgcctgatgaccagttccccttcttgattcaccctaccatgccaatgaaggagatccatgagtctattcgatggaccaaggatgcacgaaacacccaagaccatgtgcgatccttgtgtctcctagcatggcacaatgg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP144349.1_Coxsackievirus_A6_isolate_V1/Ed/UK/2011_polyprotein_gene_partial_cds
--------------------------------------------------------------------------------------------------------------------------------------------------aaatt-gcaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatgacgcaccagtcatgtctaga-tcaagcacttctg-tctccccggaccgagtatcaatagactgc-taacgcggttgaaagagaaaacgtccgttacccggctaactacttcgagaaacc-tagtagcaccattgaagctgcagagcgtttcgctcagca--ctc-cccca---gtgtagatcaggttgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcagagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacctg----tttgcg-ggttttattccac-----tctccaa--------------ttgttcagtccat-actctaaagtacattttgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcaactg-aagggtccaccatcaacttcaccaatattaattactataaggactcttatgcagcgtcggctagtagacaagattttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcagccccgttacaatccccttctgtcgaggcgtgcggttatagtgaccgagtcgcacagttaactgtgggcaactcaactattactactcaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgccacagctgtggataagcctactcgccccgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------agtctactggctggtattggaaattccctgatgtgctaaatgacacaggagttttcggtcaaaatgcccaattccattacttgtaccgctcgggtttctgcatgcatgttcagtgcaatgcgagtaaattccaccagggggccctcttagtggccgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagattttgctcatactaacccaggtaaaaatggtcaagagtttcgagatccttatgttttggatgctggaatccccctaagtcaagcactggttttcccccatcaatggatcaatctacgaactaataactgcgcaaccattattatgccatatgttaacgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttgaaatattgtaatggggccaccacagaggtgccaatcacactaactattgccccacttaattcggagtttagcggcctccgacaagcaataaaacaagggttccctacagagcttaagcctgggaccaatcagtttcttacgaccgatgacgggacatccccgccaattctgcctggttttgaaccaactccattgatccacattcctggtgagtttacctctttgttagatttgtgtcaaatagaaaccatactagaagttaataa----------t------accaccggcaccaccggg------gtcagtagattactaatccctgttcgagcacagaaca------atgtagatcagttgtgtgcatcattccaagtggatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttctcttaaggtaacctttatgttcacaggttcttttatggctactgggaaaatgctgatagcctacacaccacctggcagtgctcagcccgctacaagggaagcggcgatgcttggaacgcatatagtgtgggattttggtttgcaatcatcagttaccttagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgattactacgcaaccgggatcgttaccatttggtaccagaccaacttcgtagtgccaccagacacccccactgaggctaacattatagctcttggagcagcacagaggaacttcaccctaaagttgtgcaaggacactgacgagatccaacaaacagccgagtaccaaaacgatcct--------attacaagtgcagtgg---aaagtgctgtaagcgcgctcgc--------------tgacaccacaatatcccgagtg--------------------------------accgcagccaacactgcagttagcacccactccctgggtacagggcgtgtaccagcattgcaagctgcagaaacgggagcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtaatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcaggactggtaggagttgtggaggtgaaggactcgggcactag----cctggatggatacacagtttggcctatagacgtgatgggctttgtgcagcaacggcgcaaattagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaacgatagcacaacgcccgggatgttgctgcagtatatgtatgtaccaccaggggctcctaagccggatagcaggaaatcataccaatggcagactgccactaacccgtcagtgtttgcaaaattgagtgatccaccccctcaggtgtctgtcccgttcatgtcgccagcaacagcttatcaatggttttatgatggttaccctacatttggtgagcacaaacaagccactaatttgcaatatgggcagtgtcctaacaacatgatgggccattttgccatccgaacagtcagtgagtctaccaccggaaagaacgttcacgttcgggtgtacatgagaattaagcacgtgagagcttgggtgcctagacccctccggtcccaagcttatatggtcaaaaattacccgacgtacagccaaac----aataactaacactgcaaccgaccgtgcaagcataac---caccacggattacgaaggcggggtaccagcaaacccgcagagaacatctggt------------------------------------------aagttcggtcaacagtctggggccatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcacaatgattgggcaaacttagtatgggaaagtagctcacgagaccttctggtgtcctccactactgctcaagggtgtgatactattgcccggtgtgactgtcaaacaggagtgtattactgcaactctagaaggagacattacccagtcagctttacaaaacccagcctagtctttgtggaggctagcgagtactaccctgccagataccagtctcatctcatgcttgcggtaggccattctgagccaggagattgtggaggcattctcaggtgcccgcatggtgttgttggtatcgtgtctaccggtggcaatgggcttgtcggttttgcagatgttagagaccttctgtggttggatgaagaagcaatggagcaaggagtgtctgattacatcaaa-ggactcggtgatgcatttggaactggtttcaccgacgcagtttccagagaagtggaagctctcaagaaccacctcattgggtccgaaggagctgtcgaaaagatcctaaaaaatttaattaagctgatttctgctctggtcattgtgattaggagtgattacgacatggtcactcttacagcaaccctagctctaattggatgtcacggtagcccttgggcttggattaaagcaaagacagcagcaattctaggcatccccattgcccaaaaacaaagcgcatcctggctcaagaagttcaatgatatggctaatgccgccaaaggattggagtggatttccagcaaaattagtaagttcattgattggctcaaagagaagatcataccagcggctaaagagaaagtggagtttctgaacaacttgaagcaattacca-ttgttggagaatcagatctcaaacctcgagcagtctgcagcatcacaagaacatcttgaagcgatgttcgggaatgtgtcttacctcgcaca---------tttctgccgcaaattccaaccactctatgctacagaagctaagagggtctatgcactggagaagagaatgaacaattacatgcagttcaagagcaaacaccgaattgaacctgtatgtctcatcatcagaggctccccaggtactggcaaatccttagcaactggtatcatcgcccgagcgatagctgacaagtaccattctagtgtgtactcgttaccaccagacccagatcactttgatggttacaaacagcaagtggtcacagtcatggatgacttatgccaaaaccctgacggtaaggacatgtcactattctgtcagatggtgtccactgtggatttcattccgccaatggcttccttagaggagaaaggagtttctttcacatctaaatttgtcattgcatccaccaatgctagcaatatcatcgtaccgactgtgtctgattcagatgccattcgccgcaggttctacatggactgtgacattgaagtgacagactcatacaaaacagatttgggcagactggacgccgggcgcgctgctaaactatgttctgaaaacaatacagcaaatttcaagcgctgcagccctttggtctgtggaaaggctatccaactgagagacaggaaatccaaagtcagatacagtgtggatactgtagtttctgagcttgtaagagagtacaacaatagatctgccattggcaacacaattgaagccttgttccaaggcccgcccaagttcaggcccataaggatc---agccttgaagaaaagccagctccagatgccattagcgatctcctcgctagcgtggatagtgaagaagtgcggcagtattgc-agagaccaaggatggattattccagagactcctaccaatgtcgagcgacatcttaacagagctgtgctagttatgcaatctatcgccacagtagtagcggttgtttctttggtgtatgttatctacaaactctttgctgggtttcaaggtgcatactctggcgttcccaaacaagtgctcaagaaacctatccttcgcacggcgacagtacagggtccaagccttgactttgctctgtccttattaaggaggaacatcagacaggtgcaaacagatcaggggcatttcaccatgctaggtgtcagggaccgtctggctgtcctcccgcgccactcccaaccaggaaaaacaatctgggtggagcacaaactagtgaatattctggatgcagtcgagctagtggatgagcaaggggtcaatttagaattaaccctaatcacccttgataccaatgagaaatttagagacattaccaagtttatcccagaaaacatcagcgccgctagtgatgccaccctagtaatcaacactgaacacatgccctcaatgtttgtgccagtaggtgatgtcatacaatatggctttttgaatcttagcgggaagccaactcaccgcaccatgatgtacaactttcccaccaaagcaggtcagtgcggaggggtggtgacatcagttggaaaggtcattggtatacacataggtggtaatggtagacaagggttttgtgcaggacttaagaggagctactttgccagtgagcaaggcgagatccagtgggttaagcccaacaaagagactgggagactcaatatcaatgggccgactcacacgaagctcgagcccagtgtgttccatgatgtatttgagggaaacaaggagccagctgtcctacacagcagagacccccgtctcgaggtggatttcgagcaagccttattctccaagtacgtagggaatacactacacgagcctgatgagtacatcaaggaggcagccctccactatgcaaaccagttaaagcagctagacatcgacacctctcagatgagcatggaggaagcttgttatggtactgagaaccttgaggctattgacctccacactagtgcaggttacccatatagtgctctgggaataaagaaaagagacatcctagatcctaccactagggatgtgagcaagatgaaattttacatggacaagtatggtttggaccttccttactccacctatatcaaggatgagcttcgctcagtggataaaatcaagaagggaaagtcccgcttgattgaagccagcagcctcaatgattcagtgtacctcaggatggcttttgggcatctttatgagaccttccatgcaaaccccggaactgttaccggatcagccgtggggtgtaacccggatgtgttctggagcaagctaccaattttgctgcctggctcactctttgcctttgattactcggattatgatgctagtctcagccccgtctggttcagagcattggagctagtccttagagagataggctatagtgaggaggtaatctcgctcattgaagggattaaccatacacaccatgtgtaccgcaacaagacttattgtgtacttggtgggatgccctcaggctgctcgggaacatctatcttcaactcaatgatcaacaacatcatcattagagcactgcttatcaaaacatttaagggcattgatttggatgaactaaatatggttgcctacggggatgacgtgcttgccagttatcctttcccaattgactgcttagaactggcaaaaacaggcaaggagtatggtttaactatgactcctgcggacaagtctccctgcttcaatgaagttaactggggtaatgcaacctttctcaaaagaggcttcttgcctgatgaccagttccctttcttgattcaccctaccatgccaatgaaggagatccatgaatccattcgatggaccaaggatgcacgaaacacccaagaccacgtgcgatccttgtgtctcctagcatggcacaatgg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP144353.1_Coxsackievirus_A6_isolate_V3/Ed/UK/2013_polyprotein_gene_partial_cds
--------------------------------------------------------------------------------------------------------------------------------------------------aaatt-gcaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatgacgcgccagtcatgtctaga-tcaagcacttctg-tctccccggaccgagtatcaatagactgc-taacgcggttgaaggagaaaatgtccgttacccggctaactacttcgagaaacc-tagtagcaccattgaagctgcagagcgtttcgctcagca--ctc-cccca---gtgtagatcaggttgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcagagcacatgccctcaatcca-ggggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacctg----tttgcg-ggttttattccac-----tctccaa--------------tcgttcagtccat-actctaaagtacattttgattctgaacaatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcaactg-aaggatccaccatcaacttcaccaatatcaattactataaggactcttatgcagcgtcggctagtagacaagattttgcacaagatcctgcaaagttcacacgtcctgtcttggataccatcagggaggttgcagccccgttacaatccccttctgttgaggcgtgcggttatagtgaccgagtcgcacagttaactgtgggtaactcaactattactactcaagaggcagctaacattgtattgagctacggagagtggccagaatactgtccttctacggacgccacagctgtggataagcctactcgccccgacgtgtcagtgaataggttctacacactgtcaactaagagttggaagacag------------------agtctactggctggtattggaaattccctgatgtgctaaatgacacaggagttttcggacaaaatgcccaattccattacttgtaccgctcgggtttctgcatgcatgttcagtgcaatgcgagcaaattccaccagggggccctcttagtggccgcaatccccgaatttgtggttgctgcaagcagccctgccacgaagcctaatggacaagggttgtacccagattttgctcatactaacccaggtaaaaatggtcaagagcttcgagatccttatgttttggatgctggaatccccctaagtcaagcactggttttcccccatcaatggatcaatctacgaactaataactgcgcaaccattattatgccatatgttaacgcgcttccatttgattcagcgcttaaccactcaaattttggattggttgtgatccctattagccctttgaaatattgtaatggagccaccacagaggtgccaatcacactaactattgccccacttaattcggagtttagcggcctccgacaagcaataaaacaagggttccctacagagcttaagcctgggaccaatcagtttcttacgaccgatgacgggacatccccgccaattctgcctggtttcgaaccaactccattgatccacattcctggtgagtttacctctttgttagatttgtgtcaaatagaaaccatactagaagttaataa----------t------accaccggcaccaccggg------gtcagtagattactaatccctgttcgagcacagaaca------atgtagaccagttgtgtgcatcattccaagtggatcctgggcgcaatggtccgtggcaatccacaatggttggacagatctgtaggtattacactcaatggtctggttctcttaaggtaacctttatgttcacaggctcttttatggctactgggaaaatgctgatagcctacacaccacctggtagtgctcagcctgctacaagggaagcagcgatgcttgggacgcatatagtgtgggattttggtttgcaatcatcagttaccttagttataccttggattagtaacacccattttagagcagttaagactggaggggtatacgattactacgcaaccgggatcgttaccatttggtaccagaccaacttcgtggtgccaccagacacccccactgaggctaacattatagctcttggagcagcacagaggaacttcaccctaaagttgtgtaaggacactgacgagatccaacaaacagccgagtaccaaaatgatcct--------attacaagtgcagtgg---aaagtgctgtaagcgcgctcgc--------------tgacaccacaatatcccgagtg--------------------------------accgcagccaacactgcagttagcacccactccctgggtacagggcgtgtaccagcattgcaagctgcagaaacgggtgcaagttctaatgctagtgatgagaaccttattgagactcgctgtgtaatgaatcgaaacggggttaatgaggcgagtgtggaacacttttactctcgtgcaggactggtaggagttgtggaggtgaaggactcgggcactag----cctggatggatacacagtttggcctatagacgtgatgggctttgtgcagcaacggcgcaaattagagctgtcaacatacatgcgctttgatgccgagttcacttttgtgtccaacctcaacgatagcacaacgcccgggatgttgctgcaatatatgtatgtaccaccaggggctcctaagccggatagcaggaaatcataccaatggcagactgccactaacccgtcggtgtttgcaaaattgagtgatccaccccctcaggtgtctgtcccgttcatgtcgccagcaacagcttatcaatggttttatgatggttaccctacatttggtgagcacaaacaagccactaatttgcaatatgggcagtgtcctaacaacatgatgggccattttgccatccgaacagtcagtgagtctaccaccggaaagaacgttcacgttcgggtgtacatgagaattaagcacgtgagagcttgggtgcctagacccctccggtcccaagcttatatggtcaaaaattacccgacgtacagccaaac----aataactaacactgcgaccgaccgtgcaagcataac---caccacggattacgaaggcggggtaccagcaaacccgcagagaacatctggt------------------------------------------aagttcggtcaacagtctggggccatctatgtaggtaacttcagagtggtaaaccgacatctcgccactcacaatgattgggcgaacttagtatgggaaagcagctcacgagaccttctggtgtcctccactactgcacaagggtgtgatactattgcccggtgtgactgtcaaacaggagtgtattactgcaactctagaaggagacattacccagtcagctttacaaaacctagcctagtctttgtggaggctagcgagtactaccctgccagataccagtctcatctcatgcttgcggtaggccattctgagccaggagattgtggaggcattctcaggtgcccgcatggtgttgttggtatcgtgtctaccggtggcaatgggcttgtcggttttgcagatgttagagaccttctgtggttggatgaagaagcaatggagcaaggagtgtctgattacattaaa-ggactcggtgatgcatttggaactggtttcaccgacgcagtttccagagaagtggaagctctcaagaaccacctcattgggtccgaaggagctgttgaaaagatcctaaaaaatttaattaagctgatttctgctctggtcattgtgattaggagtgattacgacatggtcactctcacagcaaccctagctctaattggatgtcacggtagcccttgggcttggattaaagcaaagacagcagcaattctaggcatccccattgcccaaaaacaaagcgcatcctggctcaagaagttcaatgatatggctaatgccgccaaaggattggagtggatttccagcaaaattagtaagttcattgattggctcaaagagaagatcataccagcggctaaagagaaagtggagtttctgaacaacctgaaacaattacca-ttgttggagaatcagatttcaaacctcgagcagtctgcagcatcacaagaacatcttgaagcaatgttcgggaatgtgtcttaccttgcaca---------tttctgtcgcaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagagtctatgcactggagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggctccccaggtactggcaaatccttagcaactggtatcatcgcccgagcgatagctgacaagtaccattctagtgtgtattcgttaccaccagacccagatcattttgatggttacaaacagcaagtagtcacagtcatggatgacttatgccaaaaccctgacggtaaggacatgtcactgttctgtcagatggtgtccactgtggatttcattccgccaatggcttccttagaggagaaaggagtttctttcacatctaaatttgtcattgcatccaccaatgctagcaatatcatcgtaccgactgtgtctgattcagatgccattcgccgcaggttctacatggactgtgacattgaagtgacagactcatacaaaacagatttgggcagattggacgccgggcgcgctgctaaactatgttctgaaaacaatacggcaaatttcaagcgctgcagccctttggtctgtggaaaggccatccaactgagagacaggaaatccaaagtcagatacagtgtggatactgtggtttctgagcttataagagagtacaacaatagatctgccattggcaacacaattgaagccctgttccaaggcccgcccaagttcaggcccataaggatc---agccttgaggaaaagccagctccagatgccattagtgatctcctcgctagcgtggatagtgaagaagtgcggcagtattgc-agagaccaaggatggattattccagagactcctaccaatgtcgagcgacatcttaacagagctgtgtcagttatgcaatctatcgccacagtagtagcggttgtttctttggtgtatgttatttacaaactctttgctgggtttcaaggtgcatactctggcgctcccaaacaagtgctcaagaaacctatcctccgcacggcgacagtacagggtccaagccttgattttgctctgtccttattaaggaggaacatcagacaggtgcaaacagatcaggggcattttaccatgctaggtgtcagggaccgtctggctgtcctcccgcgccactcccaaccaggaaaaacaatctgggtggagcacaaactagtgaatattctggatgcagtcgagctagtggatgagcaaggggtcaatttagaattaaccctaatcacccttgataccaatgagaaatttagagacattaccaagtttatcccagaaaacatcagcgctgctagtgatgccactctagtaatcaacactgaacacatgccctcaatgtttgtgccagtgggtgatgtcatacaatatggctttttgaatcttagcgggaagccaactcaccgcaccatgatgtacaactttcccaccaaagcaggtcagtgcggaggggtggtgacatcagttggaaaggttattggtatacacataggtggtaatggtagacaagggttttgtgcaggacttaagaggagctactttgccagtgagcaaggggagatccagtgggttaagcccaacaaagagactgggagactcaacatcaatgggccaactcacacgaagctcgagcccagtgtgttccatgatgtatttgagggaaacaaggagccagctgtcctacacagcagagacccccgtctcgaggtggatttcgagcaagccttattctccaagtacgtagggaatacactacatgagcctgatgagtacatcaaggaggcagccctccactatgcaaaccagttaaagcagctagacatcgacacctctcagatgagcatggaggaagcttgttatggtactgagaaccttgaggctattgatctccacactagtgcaggttacccatatagtgctctgggaataaagaaaagagacatcctagatcctaccactagggatgtgagcaagatgaaattttacatggacaagtatggcttagaccttccttactccacctatatcaaggatgagcttcgctcagtagataagatcaagaagggaaagtcccgcttgattgaagccagcagcctcaatgattcagtgtacctcaggatggcttttgggcatctttatgagaccttccatgcaaaccccgggactgttaccggctcagccgtggggtgtaacccggatgtgttctggagcaagctaccaattttgctgcctggctcactctttgcctttgattactcgggttatgatgctagtctcagccccgtctggttcagagcattggagctagtccttagagagataggctatagtgaggaggcaatctcgctcattgaagggatcaaccatacacaccacgtgtaccgcaacaagacttattgtgtgcttggtgggatgccctcaggctgctcgggaacatctatcttcaactcaatgatcaataacatcatcattagagcactgcttatcaaaacatttaagggcattgatttggatgaactaaatatggttgcctacggggatgacgtgcttgccagttatcctttcccaattgactgcttagaactggcaaaagcaggcaaggagtatggtttgactatgactcctgcggacaagtctccctgcttcaatgaagttaactggggtaatgcaacctttctcaaaagaggcttcttgcctgatgaccagtttcctttcttgattcaccctaccatgccaatgaaggagatccatgaatccattcgatggaccaaggatgcacgaaacacccaagaccacgtgcgatccttgtgtctcctagcatggcacaatgg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP144340.1_Coxsackievirus_A6_isolate_V12/Ed/UK/2013_polyprotein_gene_partial_cds
--------------------------------------------------------------------------------------------------------------------------------------------------aaact-gtaacttagaaga------------atagcactctatc-gatcaa-tagcaggcatggcgcgccagtcatgtctaga-tcaagcacttctg-tctccccggaccgagtatcaatagactgc-tagcgcggttgaaggagaaaacgtccgttacccggctaactacttcgagaaact-tagtagcaccattgaagctgcggagtgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaatcca-ggggg-tagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgaccaacagagctttgata-----tacttg----tttgtg-ggtttcgttccac-----tcaccaa--------------tcgtacagtccat-actctaaagtacattttgattctgaataatagaaa-------atgggcgcccaagtttcaacagaaaaatctgggtcgcacgagacaaagaatgtagcgaccg-aagggtctactatcaacttcaccaacatcaattactataaggactcttatgcagcgtcagctagcagacaggattttgcacaagatccagcaaagttcacacgccctgtcttggataccatcagggaggttgcagccccgttgcaatccccttctgtcgaggcgtgcggttatagtgaccgagtcgcacagttgactgtgggcaactcgaccattaccacccaagaggctgccaacattgtactgagctacggagagtggccagaatactgtccttctacggacgctacagctgtggacaagcctactcgccctgacgtgtcagtaaataggttctacacactgtcaactaagagttggaagacag------------------aatctactggctggtactggaaattccctgatgtgctaaatgatacaggagttttcggtcagaacgcccaattccactacttgtaccgctcgggtttctgcatgcacgttcagtgtaatgcaagcaagttccatcagggggccctcttagtggctgcaattcccgaatttgtggttgctgcaagcagccctgctacgaagcctaatgggcaaggattgtacccagattttgctcataccaacccaggtaaaaatggccaagagtttcgagatccttatgtcttggacgctggagtcccccttagtcaagcactggtctacccccatcaatggatcaatctacgaactaataattgcgcaaccattattatgccatatgtcaatgcgcttccatttgattcagcgcttaaccattcaaattttggattggttgtgattcctattagccctttaaaatattgtaatggagctaccacagaggtaccaatcacattaactattgccccacttaactcggagttcagcggcctccgacaagcaataaaacaagggtttcccacagagctcaagcctgggaccaatcaatttcttacaactgatgatgggacayccccgccaatactgcccggttttgaaccaactccattgattcacattcctggtgagttcacctctttgttagatttgtgtcaaatagaaactatactagaagtcaataa----------t------actaccggcaccaccggg------gtcagtagattactaatccccgttcgagcgcagaata------atgtggaccagttgtgtgcatcattccaagtagatcctgggcgcaatggcccgtggcaatccacaatggttggtcagatctgtaggtattacactcaatggtctggttcccttaaagtgacctttatgttcacaggttcttttatggccacagggaaaatgctgatagcctatacaccacctggtagtgctcagcccgctacaagggaagcagcaatgcttggaacgcatatagtatgggattttggtttgcaatcatcagttaccttagttataccttggatcagtaacacccattttagagcagttaagactggtggggtatacgactactacgcaaccgggatcgtcaccatttggtatcagaccaacttcgtagtgccaccagatacccccacggaggctaacattatagctcttggagcagcacagaaaaacttcaccctaaagctgtgcaaggacaccgatgagatccaacaaacagcagagtaccagaatgatccc--------attgcaaatgcagtgg---aaagtgctgtgagtgcgcttgc--------------tgacaccacaatatcccgggtg--------------------------------accgcagccaacactgcagttagcacccactccctgggcacagggcgtgtaccagcattgcaagccgcggaaacgggtgcaagctctaatgctagtgatgagaatcttattgagactcgctgtgtgatgaaccgaaacggcgttaatgaggcgagtgtggaacacttttactctcgtgcagggttggttggagttgtggaggtgaaggactcgggcactag----tctggatgggtacacagtttggcctatagatgtgatgggcttcgtgcagcagcggcgcaaactagagctgtcaacatacatgcgctttgatgccgaattcacttttgtgtccaacctcaatgatagcacgacgcccgggatgttgctgcagtatatgtatgtaccaccaggggcccctaagccggatagcaggaaatcataccaatggcagactgctactaacccgtcggtattcgcaaaactgagtgatccacccccccaggtctctgtcccgttcatgtcgccagcaacagcttatcagtggttttatgatggttaccctacatttggtgagcacaaacaagctaccaatttgcaatatgggcagtgccctaacaacatgatgggccattttgccatccgaacagtcagtgaatctaccactggaaaaaacgttcacgttcgggtgtacatgagaattaagcacgtgagagcttgggtacctagaccccttcgatcccaagcttatatggtcaagaattacccgacgtacagtcaaac----aataactaacactgcagccgaccgtgcaagcataac---caccacggattatgaaggcggggtaccagcaaacccacaaagaacatctggt------------------------------------------aagtttggccaacagtccggggctatttatgtaggtaactttagagtggtaaaccgacatctcgccactcataatgattgggccaatttagtatgggaaagtagctcacgagaccttctggtgtcttccactactgctcaaggatgtgacaccattgcccgatgtgactgtcaaacaggagtgtattactgtaactctagaaggaaacactacccggttagtttttctaagcctggcctcgtcttcgtggaagctagtgagtattatcctgccaggtatcagtcgcacctcatgcttgcgaagggtcattctgaacccggggactgtggtggtattcttaggtgccaacatggtgtgattggtatcgtgtccactggtggtaacggacttgtcggatttgcagatgtcagggatcttttgtggctggatgaagaggccatggaacagggtgtgtcagattacatcaaa-gggctcggtgacgcatttggaactggttttactgatgcagtgtctagggaagtggaagctcttaagaactaccttataggatctgaaggggctgttgagagaattctaaagaacctgatcaagctgatctcagcgctagtgatagtgatcagaagtgattatgacatggtgaccctcacggcaactttggctctaattgggtgccatggaagcccctgggcttggatcaaagccaaaacagcatccattctaggcatccccattgctcagaagcagagcgcatcatggctcaagaagttcaatgatatggctagtgctgctaaggggttggaatggatatccaataaaatcagtaaatttattgactggcttaaagagaagattataccagcagctaaagagaaggtagaattcctaaacaacttgaaacagttgcca-ttgttggaaaaccaaatctctaacctggaacagtctgcagcctcacaagaagacctcgaagccatgttcgggaacgtatcgtatctcgcaca---------tttctgtcgcaagttccagccactctacgccacagaggccaaaagagtttatgctctggagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggctctccaggcacgggtaaatctttggcaactggcatcattgctcgagcgatagctgacaagtatcactccagtgtatattcactaccaccagatccagatcattttgatggttataaacaacaagtggttacagtcatggacgatttgtgccaaaatcctgatggcaaagatatgtcactattctgccagatggtgtccactgtagactttattccgccaatggcctcccttgaggagaagggtgtttcatttacatccaaatttgtcatagcgtctactaatgctagcaacatcatagtgccaacagtgtctgattcggatgctatccgtcgcagattctacatggactgcgatattgaagtgacagactcatataaaacagaattgggtagactggatgctgggcgagccgctaggttatgctctgaaaataacacagctaatttcaagcgctgtagccctttggtatgcgggaaagctatccagctaagggataggaaatccaaggtgagatacagcgtggatacagtggtctctgaactcattagagagtataataatagatcagccattggcaacactattgaagctttgttccaaggggctcccaaatttaggcctatcagaatt---agccttgaagagaagccagctcctgacgctattagcgacttacttgctagtgtagacagtgaagaagtacgccaatattgc-agagaccaaggatggatcattccagaaacccctaccaatgttgagcgacacttaaatagagctgtgctagtcatgcaatctatcgccacagtagtggcagttgtctcactggtgtatgtcatctacaaactttttgctggatttcaaggtgcgtattctggagctcccaagcaagcgctcaagaaacctatcctccgcacggcaaccgtgcagggtccaagtcttgattttgccctgtccctattgaggagaaacattaggcaagtccaaacagatcaaggacacttcaccatgttgggtgttagagaccgcctggccgtccttccacgccactcacagcctggaaaaacgatctgggtggaacacaaactcgtgaacgttctcgatgctgtagagttagtggatgagcaaggagtcaacctggaactaacactggtcactctcgacaccaatgagaaattcagagacatcactaagttcatccctgagaacatcagcgccgctagtgacgccaccctcgtaatcaacacagagcacatgccctcaatgtttgtgccagtgggtgacgttgtgcaatatggatttctaaatctcagcgggaaaccaactcaccgcactatgatgtacaattttcctactaaagcagggcaatgtggtggggtagtgacagcagttggcagagttattggcatccacataggtggcaatggcaggcaaggcttctgtgcagggcttaagaggagttattttgctagtgaacaaggagaaattcaatgggttaaacccaataaagaaactggaagactcaacattaatggaccgacccgcactaagcttgaacccagtgtgttccatgatgtttttgagggaaataaagaaccagcagtcttgcacagcagagatccccgccttgaggtagattttgagcaggctttattttccaagtatgtggggaacacgctgcatgagcctgatgagtacatcaaagaagctgctctgcactatgcaaaccagttaaaacaactagacatcgacacctctcaaatgagcatggaagaggcttgttatggcaccgagaaccttgaggctattgatctccacaccagtgcaggctatccgtatagtgctttggggataaagaagagagacattctagatcctaccaccagggatgtaagtaaaatgaagttttacatggataagtatggtttggatctcccctattctacttatgtcaaggatgagctccgctcaatagataagatcaagaagggaaaatcccgcttaattgaagcgagtagtctcaatgattcagtgtatctcaggatggcatttggacacctttatgaaaccttccatgcaaaccctggaactgtcactggttcagccgtagggtgcaacccggatgtgttctggagtaagctaccaatattgctgcctggttcactctttgcttttgattactcaggttatgatgctagtcttagccctgtctggttcagggcactggaactagtccttagagagataggctatagtgaaaaggcaatatcactcattgaagggatcaatcatacgcaccatgtataccgcaacagaacttactgcgtgcttggtgggatgccctcgggctgttcaggaacatctatctttaactcaatgatcaataacatcatcattagggcattgcttatcaagacatttaagggtattgatttggatgagctcaacatggttgcctacggggacgatgtgcttgccagttatcctttcccaattgactgtttagaactatcaaaaacaggtaaggagtatggcctaacaatgaccccagcagacaagtccccctgcttcaatgaagtcacctgggacaacgcaacatttctcaaaagaggcttcttacctgatgatcaattccccttcttgattcaccctactatgccaatgaaggaaatccatgaatctattcggtggaccaaggacgcgcgaaatactcaagatcacgtgcgatccttgtgcctcttggcgtggcacaatgg--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289435.1_Coxsackievirus_A8_isolate_CV-A8/P82/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccactcaca-gggcccac-t-gggcgctagcacactgattctccggtacctttgtgtgctt-g-ttttagt-----atccc---t---cccc-c---a-aactc-gtaacttagaaga------------ataacacgctatc-gatcaa-tagcaggcatggcgcaccagccatgtctcga-tcaagcacttctg-tttccccggacagagtatcaatagactac-tcacgtggttgaaggagaaaacgtccgttatccggctaactacttcgagaaacc-tagtaacaccattgaagctgcagagcgtttcgttcagca--ctt-acccc---gtgtagatcaggtcgatgagtcactgca-ttccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtca-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcataccctcaaacca-ggggg-tagtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attttcttactggctgcttatggtgacaattgaa-------gaattgttgccatatagctattggattggccatccgg--tgtgtaacagagcaatcatc-----tatttg----tttgcc-gggtacatcccat-----taacgct--------------caactcttttagt-acattacagtatatactaatcctgaatacaagaaa-------atgggagcacaggtctcaacacaaaagtctggtagtcacgagactagcaatgtagccactg-aagggtctaccatcaactttactaatatcaattattacaaggactcatacgctgcttcggctagcaagcaggacttcactcaggatcctactaggttcactagccctgtgcttgatgcgctgaaggaagtggcacctccattgaagtcaccctcagtggaggcgtgcgggtacagtgacagagtagcacagttgactgtcggtaattcaacaatcaccacgcaagaggctgctaacatagttcttgcttacggggaatggcctgagtactgtcctgacaaagatgccaccgctgtagataaacctacacgccctgacgtgtcggttaacagattctacaccatgtctacgcaaatgtggcaggaca------------------cctcgaaagggtggtactggaagttcccagatgttctcaccaagactggtgtctttggacaaaatgcccagtaccattacctgtacagatctgggttctgcatacacgttcaatgcaatgctagtaaatttcatcaaggagcactgttagtggctgctattccggagatggtgttaggagccaatagttcagaccccaagcccaacactgcaaaac---accctgaattcactacgacgatgccaggcgctaacggtggcactttcgaaaatccctatattatggatatgggggttcccttgagccaagccttggtgtttccacaccagtggatcaacctgcgcactaacaactgtgcaaccatcatagtgccttacattaatgctgtcccatttgactctgccattaaccacaacaactttacgctagccgtaattccaattagcccattaaaatactgcacaggggcgacaacggccattcctataacagtaacgatagccccattaaattctgaattttgtggattgaggcaagccacatcacagggaataccagtggagctaaaacccggcaccaatcaatttttgacaactgacaatgaggtctccgtgccaatcttacctggtttccaacctacaccagctatacatataccaggggaggtgaataacctcctggagctctgccagatcgagtctatcttggaggtcaataa----------t------gtgactgggcaagaaggg------ataaaccgactccttatcccagtctctacacagagtg------ataaagacactttgtgtgcatcactcagagtcgatccaggtagggatggaccttggcaatccactttggttgggcaaatatgtaggtattacacccagtggtctggctcattagagatcacattcatgtttactggctcattcatggcaaccggtaaaatgctaatagcttactccccacctgggagcgcgcaaccaacaacaagagacctagcaatgctcggcacgcatgtagtgtgggatttcgggttgcagtcatccatcactctagtagtcccatggatcagtaatacacacttcaggacaggcaaagtgggtggttactttgattactatgcgtctggcatagtaactatttggtatcagacaaacttcgtcgtacctcccgacacaccgagccaagctcatataatagcattgggagctgcccagaagaatttcacactcaagctgtgtaaggacacagatgaggtcacacaacaagctgtgttgcagggggacccc--------attgaagacataataa---ctaacacagt-----ttctcgcacattgcaacaaattagcgctccaactcatggtacc--------------------------------acttcagcaaacaccactgtgagcaaccataaaataggtactggggatgttccagctctccaagctgcggagacaggtgctacctctaacgcctcagatgagaacatgattgagacacgctgtgtgctaaatcgcaatggagtcgtagaaaccagtttggatcacttcttttcaagggcaggtctagtgggggtgatcaatgtgcaagatggtggtacaca-------gaagggattcgaggtgtgggacgtggacgtgatgggatttgtgcagctcagaaggaagttggagatgtttacatacatgagatttaacgctgagttcacatttgtgtccacacttgcggatggcacaactcccagggtgatgttacagtacatgtatgtcccacctggtgcccccaaacctcaagagagggattcgtttcaatggcaaacagcaactaacccatcagtgttctgcaaaatgagcgatccccccccacaagtctccgtccctttcatgtcgccagccagtgcgtatcagtggttctatgacgggtatcctacatttgatgatcgacctgccacctcgaaccatccatatggtcaatgtcctaacaacatgatgggcacatttgcagtgcgatttgtcagcaagacccctgccactcgagacttgcgtgttagggtgtatatgcgcctcaaacacgtgcgcgcttgggtgccgagacccatacgatcccaagcatacatcttaaagaactacccaaattatgatgggac----aaaaataacaccaacgtccaaggat-----------------------------aggcaaaacatt-------------aaaacgactggg------------------------------------------aaattcggtcagcagtccggtgccatttatgttggcaactacagagtagttaacagacaccttgctacacacaatgactgggctaacttagtatgggaagacagttcaagggatctccttgtgtcgtccacgaccgcccaaggatgtgacgtcattgctcgttgcaactgccaaactggagtgtactactgtagctcccgaagaaagcactacccagttagtttttcaaagcctagcctgatctacgtggaggccagtgagtattacccggctaggtatcagtctcacctcatgctcgcgcaaggacactcagaacctggcgattgtggtggcatcctcaggtgccagcacggtgttgtcggtatagtgtccactggtggtaatgggcttgtcggctttgcagatgttagggacctcctttggctagatgaggaggcgatggagcaaggtgtgtctgattacattaag-ggactcggtgatgcatttggaactggcttcaccgatgctgtctccagagaagtggaagctcttaagaaccacctaattggttctgaaggggctgttgagaaaatcctcaagaatctgatcaagttaatctctgctcttgtcattgtaattaggagtgattacgacatggtcacccttacagcagccctagctttaattggctgtcacggcagtccttgggcgtggatcaaagcaaagacagcatctatcttaggcatccctattgctcaaaaacagagcgcctcctggcttaagaagtttaacgatatggccaacgctgctaaggggttggagtggatttccaacaagatcagcaaattcatcgattggctcaaggagaaaatcataccagcagctaaggagaaggttgagttcctaaataacctaaaacagctgcca-ctgctagagaaccaaatctcaaacctagaacaatctgctgcctcacaagaagatcttgaggctatgtttgggaatgtgtcgtacttagccca---------cttttgccgtaaattccaaccactatatgctatagaggctaaaagagtctacgctttagagaagaggatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctcatcatcaggggatcgccgggcactggaaaatctttggcaaccggcatcatcgcccgggcaatagctgacaagtatcactctagtgtgtactccctcccaccagacccagatcactttgatggatataaacaacaggtggttaccgtcatggatgacttatgccagaaccctgacggcaaggacatgtctttgttctgtcaaatggtgtccactgtggatttcatccctccaatggcttccctcgaggagaaaggggtgtctttcacctctaaatttgtcatcgcgtccactaatgccagcaacattatagtgccaacagtgtcagattctgacgctatccgccgcagattttatatggattgtgacattgaggtgacagactcatacaaaacagatttgggcagattggatgctggtcgggccgccaagctatgctctgagaacaacactgccaacttcaaacgctgcagccctctggtgtgcgggaaagctattcaactcagagacaggaaatctaaggttagatatagcgtggatacagtggtgtctgaactcattagggagtacaacaatagatctgccattggaaacacaattgaagcactgttccagggaccacccaagtttaggccaattaggatc---agccttgaggagaagccagctccagatgctattagtgacctccttgccagcgtggatagcgaagaggtacgccagtattgc-agagaccaaggctggatcatcccagagactcccacaaatgttgaacgacacctcaacagagctgtgctgatcatgcagtccatcgccacagtggtagcggttgtctctttggtgtatgtcatctataagctctttgctggattccagggtgcttactctggtgcccctaagcaggcactcaagaaacctgttctccgcacggcaacagtgcagggtccaagtctcgactttgccttatcactattgagaaggaatatcaggcaggtccagacagatcaagggcactttaccatgttgggagtcagggatcgcttagctgtccttccacgacactcacaacctggaaagacaatctgggtagagcacaagctcgtgagcattctggatgccgtcgaactagtggacgaacagggggtcaatttggagctgaccttagtcaccttagacaccaatgagaagttcagagatattaccaaattcatcccagagagcatcagcgctgccagtgatgccactttagtgatcaacacagagcatatgccttcaatgtttgtgccggtaggtgacgtcgtgcagtatggctttctgaatcttagtggaaagccaactcaccgcactatgatgtacaactttcccactaaggcaggtcagtgtgggggagtagtcacatcagttgggaaggtcattggtattcacatacgcggtaatggcagacaaggtttctgtgcggggcttaagagaagctacttttgcagtgagcaaggagagatccaatgggtaaagcccaacaaggagactgggagacttaacatcaatgggccaacccgtactaaactcgagcctagtgtgtttcatgaagtctttgaaggcaataaggaaccggcagttttgcacagtaaagactctcgcctcgaggtggattttgaacaggcgttgttctccaagtacgtggggaatacgttacatgagcctgatgagtacgttagagaagcagcttttcactatgcaaaccagttgaagcaactggacatagacacttttcagatgagcatggaggaggcttgttacggtacggataaccttgaggccattgacctgcacactagcgctggctacccctatagtgccctggggataaagaaaagagatatactagaccccactaccagagatgtgagcaagatgaagttctatatggataaatatggccttgatctcccttattccacctacgttaaggatgaactccgctcaatagataaaatcaagaaagggaagtcccgtttgattgaagctagcagcttgaatgactcagtttatttcaggatgacttttggacacctttatgaaacttttcatgcaaaccctggaactgtaactggctcagctgttggatgtaatccagatgtgttctggagcaagttgccaatcttgctccctggttccctcttcgcttttgactactcgggctatgatgctagccttagtccagtctggttcagagctcttgagttagtccttagagaaataggctatagtgaggaggcagtgtcactcattgagggaatcaaccacacacaccatgtgtatcgcaacaaaacctattgcgtgcttggtggaatgccctcagggtgctcaggaacatccattttcaattcaatgattaacaacatcatcattagagcactactcattaaaacatttaagggaattgatttggacgaacttaacatggttgcttatggggacgacgttctggctagctaccctttcccgattgattgcctggagctggccaaaacaggtatggagtatggtctaactatgactcctgcagacaagtccccatgtttcaacgaggtcaattgggcaaatgcaacctttcttaaaaggggtttcttacctgatgagcaattcccattcttgatccaccctactatgccaatgaaggaaattcacgagtccatacgctggaccaaagacgcacgaaatactcaagatcatgtgcgctctctatgccttctggcatggcacaatggtaaacaagaatatgagaaatttgtgagtacaattagatctgtcccagtagggaaagcattggctattccgaactatgaaaacctgagacgcaattggctcgaattattct-----agaggttaaac-------------------------acac---------------ctcaaccc-caccagca----ttctggt------c-g-----tgtaaat-a-gctg--------gtgggggtaaatttgtata-ccacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM609477.1_Coxsackievirus_A8_isolate_CVA8/SZ127/CHN/2012_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactctgattctacggaatctttgtgcgcct-g-ttttata-----atccc---c---tccc-c---c-aa--t-gtaatttagaag--------------caaagtactaac-gatcaa-cagcaggcgtggcgcgccagccatgtctcga-tcaagcacttctg-tttccccggacagagtatcaatagactac-tcacgtggttgaaggagaaaacgtccgttatccggctaactacttcgagaaacc-tagtaacaccattgaagctgcagagcgtttcgctcagca--ctt-acccc---gtgtagatcaggtcgatgagtcactgca-ttccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtca-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcataccctcaaacca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attttcttactggctgcttatggtgacaattgaa-------gaattgttgccatatagctattggattggccatccgg--tgtgtaacagagcaatcatc-----tatttg----tttgtc-gggtatatcccac-----taacgct--------------caactcttttaac-acattacagtatatactaatcctgaatacaagaaa-------atgggagcacaggtctcaacacaaaagtctggcagtcacgagactagcaatgtagccactg-aagggtccaccatcaactttactaatatcaattattacaaggactcgtacgcagcttcggctagcaagcaggactttactcaggatcctaccaggttcactagccctgtgcttgatgcgctgaaggaagtggcacctccattgaagtcaccctcagtggaggcgtgcgggtacagtgacagagtagcacagttgactgttggtaattcaacaatcaccacgcaagaggctgctaacatagttcttgcttacggagaatggcctgagtactgtcctgacaaagatgccaccgctgtagataaacctacacgccctgacgtgtcggttaacagattctacaccatgtctacgcaaatgtggcaggaca------------------cctcgaaagggtggtactggaagttcccagatgttctcaccaagactggtgtctttggacaaaatgcccagtaccattacctgtacagatctgggttctgcatacacgttcaatgcaatgctagtaaatttcatcaaggagcactgttagtggctgccatcccggagatggtgttaggagccaatagttcagatcccaagcccaacactgcaaaac---accctgaattcactacgacgatgccaggcgctaacggtggcactttcgaaaatccctatattatggatatgggggttcccttgagccaagctttggtgtttccgcaccagtggatcaatctgcgcactaacaactgtgcaaccatcatagtgccttacattaatgctgtcccatttgactctgccattaaccacaacaactttacgttagtcgtaattccaattagcccattaaaatactgcacaggggcgacaacggccattcctataacagtaacgatagccccattaaattctgaattttgtggattgaggcaagccacatctcagggaataccagtggagctaaaacctggcaccaatcaatttttgacaactgacaatgaggtctccgtgccaatcttacctggtttccaacctacaccagttatacatataccaggggaggtgaataacctcctggagctctgccagatcgagtctatcttggaagtcaataa----------t------gtgactggacaagaaggg------ataaaccgactccttatcccagtctctacacagagtg------ataaggacactttgtgtgcatcactcagagtcgatccaggtagggatggaccttggcaatctactttggttgggcaaatatgtaggtattacacccagtggtctggctcattagagatcacattcatgtttactggctcattcatggcaaccggtaaaatgctaatagcttactccccacctgggagcgcgcaaccaacaacaagagacctagcaatgctcggcacgcatgtagtgtgggatttcgggttgcaatcatccatcactctagtgatcccatggatcagtaatacacacttcaggacaggcaaagtgggtggttactttgattactatgcgtctggcatagtaactatttggtatcagacaaacttcgtcgtacctcccgacacgccgagccaagctcatataatagcgttgggagctgcccagaagaatttcacacttaagctgtgtaaggacacagatgaggtcacacaacaagctgtgttgcagggggacccc--------attgaagacataataa---ctaacacagt-----ttctcgcacactacagcaaattagcgctccaactcatggtacc--------------------------------actgcagcaaacaccactgtgagcaaccataagataggcactggagatgttccagctctccaggctgcggagacaggtgctacctctaacgcctcagatgagaacatgattgagacacgctgcgtgctaaatcgcaatggaattgtagaaaccagtttggaccacttcttttcaagggcaggtctagtgggggtgatcaatgtgcaagatggtggcacgca-------gaagggattcgaggtgtgggacgtggacgtgatgggatttgtgcagctcagaaggaagttggagatgtttacatacatgagatttaacgctgagttcacatttgtgtccacacttgcggacggcacaactcccagggtgatgttacagtacatgtatgtcccacctggtgcccccaagcctcaagagagggattcgtttcaatggcaaacagcaactaacccatcagtgttctgcaaaatgagcgatccccccccacaagtctccgtccctttcatgtcgccagccagtgcgtatcagtggttctatgacgggtatcctacatttgatgatcgacctgccacctcaaaccatccatatggtcaatgtcctaacaacatgatgggcacatttgcagtgcgatttgtcagcaagacccctgctactcgagacttgcgtgttagggtgtatatgcgcctcaaacacgtacgcgcttgggtgccaagacctatacgatcccaagcatacatcttaaaaaactacccaaactatgatgggac----aaaaataacaccaacgtccaaggat-----------------------------aggcaaagcata-------------aaaacgactggg------------------------------------------aaattcggtcagcagtccggtgctatttatgttggcaattacagagtagttaacagacaccttgccacacacaatgactgggctaacttggtatgggaagacagttcaagggatctccttgtgtcgtccacgactgcccaaggatgtgacgtcattgctcgttgcaactgccaaactggagtgtactactgtagctcccgaagaaagcactacccggttagtttttcaaagcctagcctgatctacgtggaggccagtgagtattacccggctaggtatcagtctcacctcatgctcgcgcaaggacactcagaacctggcgattgtggtggcatcctcaggtgccagcacggtgttgtcggtatagtgtccaccggtggcaatggacttgtcggctttgcagatgttagggacctcctttggctagatgaggaggcgatggagcaaggtgtgtctgattacattaag-gggctcggtgatgcatttggaactggcttcaccgacgctgtctccagagaagtggaggctcttaagaaccacctaattggttctgaaggggctgttgagaaaatcctcaagaatctgatcaagttaatctctgctcttgtcattgtaattaggagtgattacgacatggtcacccttacagcaactctagctttaattggctgtcacggcagtccttgggcgtggatcaaagcaaagacagcgtctattttaggcatccctattgctcaaaaacagagcgcctcctggcttaagaagtttaacgatatggccaacgctgctaagggattggagtggatttccaacaagatcagcaaatttatcgattggctcaaggagaaaatcataccagcagccaaggagaaggttgagttcctaaataacctgaaacagctgcca-ctgctagagaaccaaatttcaaacttagaacaatctgccgcctcacaagaagatcttgaggctatgtttgggaatgtatcgtacttagccca---------cttttgccgaaaattccaaccactatatgctatagaagctaaaagagtctacgctttagagaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctcatcatcaggggatcgccgggcactggaaaatctttggcaaccggcatcatcgcccgggcaatagctgacaagtatcattctagtgtgtactccctcccaccagacccagatcactttgatggatataaacaacaggtggttaccgttatggatgacttatgccagaaccctgacggtaaggacatgtctttgttctgtcaaatggtgtctactgtggatttcatccctccaatggcttccctcgaggagaaaggggtgtctttcacctctaaatttgtcatcgcgtccactaatgccagcaacattatagtgccaacagtgtcagattctgacgctatccgccgcagattttatatggattgtgacattgaggtgacagactcatacaaaacagacttgggcagattggatgccggtcgggccgccaagctatgctctgagaacaacactgccaactttaaacgctgcagccctctggtgtgcgggaaagctattcaactcagagacaggaaatctaaggttagatatagcgtggatacagtggtgtctgaactcattagggagtacaacaatagatctgccattggaaacacaattgaagccctgttccagggaccacccaagtttaggccaattaggatc---agccttgaggagaagccagctccagatgctattagtgaccttcttgccagcgtggatagcgaagaggtacgccagtattgc-agagaccaaggctggatcatcccagagactcccacaaatgttgagcgacacctcaacagagctgtgctgatcatgcagtccatcgccacagtggtagcggttgtctctttggtgtatgtcatctacaagctctttgctggattccagggtgcttactctggtgcccctaagcaggcactcaagaaacctgttctccgcacggcaacagtgcagggcccaagtctcgactttgccttatcactattgagaaggaatatcaggcaggtccagacagatcaaggacactttaccatgttgggagtcagggatcgcctagctgtccttccgcgacactcacaacctggaaagacaatctgggtagagcacaagctcgtgagcattatggatgccgtcgaactagtggacgaacagggggtcaatttggagctgaccttagtcaccttagacaccaatgagaagttcagagatattaccaaatttatcccagaaagcatcagcgctgctagtgatgccactttagtgatcaacacagagcatatgccttcaatgtttgtgccggtaggtgacgtcgtgcagtatggctttctgaatcttagtggaaagccaactcaccgcactatgatgtacaactttcctactaaggcaggtcagtgtgggggagtagtcacatcagttgggaaggtcattggtattcacataggcggtaatggcaggcaaggtttctgtgcgggactcaagagaagctattttgctagtgagcaaggagagatccaatgggtaaagcccaacaaggagactgggagacttaacatcaatgggccaacccgtactaaactcgagcctagtgtgttccatgaagtctttgaaggcaataaggaaccggcagtcttgcacagtaaagactctcgcctcgaggtggattttgaacaggcgttgttctccaagtacgtggggaatacgttacatgagcctgatgagtacgttagagaagcagctcttcactatgcaaaccagttgaagcaactggacatagacacttctcagatgagcatggaggaggcttgttacggtacggacaacctcgaggctattgacctgcacaccagcgctggctacccctatagtgccctggggataaagaaaagagatatactagaccccactaccagagatgtgagcaagatgaagttctatatggataaatatggccttgatctcccttattccacctatgttaaggatgaacttcgctcaatagataaaatcaagaaagggaagtcccgtctgattgaagctagcagcttgaatgactcagtctatctcaggatgacttttggacacctttatgaaacttttcatgcaaaccctggaactgtaactggctcagctgttggatgcaatccagatgtgttttggagcaagttgccaatcttgctccctggttccctcttcgcttttgactactcgggctatgatgctagccttagtccagtctggttcagagctcttgagttagtccttagagaaataggctatagtgaggaggcagtgtcactcattgagggaatcaaccacacacaccatgtgtatcgcaacaaaacctattgcgtgcttggtggaatgccctcagggtgctcaggaacatccattttcaattcaatgattaacaacatcatcattagagcactactcattaaaacatttaagggaattgatttggatgaacttaacatggttgcttatggggacgatgttctggctagctaccctttcccgattgattgcctggagctagccaaaacaggtatggagtatggtctaactatgactcctgcagataagtccccatgtttcaacgaggtcaattgggcaaatgcaacctttcttaaaagaggtttcctacctgatgagcaattcccattcttgatccaccctactatgccaatgaaggaaattcacgagtccatacgctggaccaaagacgcacgaaatactcaggatcatgtgcgctctctttgccttctggcatggcacaatggtaaacaagaatatgagaagtttgtgagcacaattagatctgtcccagtagggaaagcattggctattccgaactatgaaaacctgagacgcaattggctcgaattattct-----agaggttaaac-------------------------acacg-------------actcaaccc-caccagca----atctggt------c-g-----tgtaagt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM609480.1_Coxsackievirus_A8_isolate_CVA8/SZ39/CHN/2013_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactctgattctacggaatctttgtgcgcct-g-ttttata-----acccc---c---tccc-c---c-aa--t-gtaatttagaag--------------caaagtactaac-gatcaa-cagcaggcgtggcgcaccagccatgtctcga-tcaagcacttctg-tttccccggacagagtatcaatagactac-tcacgtggtcgaaggagaaaacgtccgttatccggctaactacttcgagaaacc-tagtaacgccattgaagctgcagagtgtttcgctcagca--ctt-acccc---gtgtagatcaggtcgatgagtcactgca-ttccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtca-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtggtcctccggcccctgaatgcggctaatcctaactgcggagcgcataccctcaaacca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attttcttactggctgcttatggtgacaattgaa-------gaattgttgccatatagctattggattggccatccgg--tgtgtaacagagcaatcatc-----tatttg----tttgtc-ggatacatcccac-----taacgct--------------taactcttttaac-acattacagtatatactaatcctgaacacaagaaa-------atgggagcacaggtctcaacacaaaagtctggtagtcatgagactagcaatgtggccactg-aagggtccaccatcaactttactaatatcaattattacaaggactcgtacgctgcttcggctagcaagcaagacttcactcaggatcctactaggttcactagccctgtgcttgacgcgctgagggaagtggcacctccattgaagtcaccctcagtggaggcgtgcgggtacagtgacagagtggcacagttgactgttggtaattcaacaatcaccacgcaagaggctgctaacatagttcttgcttacggggaatggcctgattactgtcctgacaaagatgccaccgctgtagataaacctacacgccctgacgtgtcggttaacagattctacaccatgtctacgcaaatgtggcaggaca------------------cctcgaaagggtggtactggaagttcccagatgttctcaccaagactggtgtctttggacaaaatgcccagtaccattacctgtacagatctgggttctgcatacacgttcaatgcaatgctagtaaatttcatcaaggggcactgttagtggctgctatcccggagatggtattgggagccaatagctcagatcccaagcccaacactgcaaaac---accctgaattcactacgacgatgccaggcgctaacggtggcactttcgagaatccctatattatggatatgggggttcccttgagccaagctttggtgtttccacaccagtggattaacctgcgcactaacaactgtgcaactatcatagtgccttacattaatgctgtcccatttgactctgccatcaaccacaacaactttacgttagccgtaattccaattagcccattaaaatactgcgcaggggcgacaacggccattcccataacagtaacgatagccccattaaattctgaattttgtggattgagacaagccacatcacagggaataccagtggagctaaaacctggcaccaatcaatttttgacaactgacaatgaggtctccgtgccaatcttacctggtttccaacctacaccaattatacatataccaggggaggtaaataacctcctggagctctgccagatcgagtctatcttggaggtcaataa----------t------gtgactgggcaagaaggg------ataaaccgactccttatcccagtctccacacagagtg------ataaggacactttgtgtgcatcactcagagtcgatccaggtagggatggaccttggcaatctactttggttgggcaaatatgtaggtattacacccagtggtctggctcattagaaatcacattcatgtttactggctcattcatggcaaccggtaaaatgctaatagcttactccccacctgggagcgcgcaaccaacaacaagagacctagcaatgctcggcacgcatgtagtgtgggatttcgggttgcaatcatccatcactctagtgatcccatggatcagtaatacacacttcaggacaggcaaagtgggtggttatttcgattactatgcgtctggcatagtaactatttggtatcagacaaacttcgtcgtacctcccgacacgccgagccaagctcatataatagcgttgggagctgcccagaagaatttcacacttaagctgtgtaaggacacagatgaggtcacacaacaagctgtgttgcagggggacccc--------attgaagacataataa---ctaacacagt-----ttctcgcacattgcagcaaattagcgctccaactcatggtacc--------------------------------actgcagcaaacaccactgtgagcaaccataagataggcactggagatgttccagctctccaggctgcggagacaggtgctacctctaacgcctcagatgagaacatgattgagacacgctgtgtgctaaatcgcaatggagtcgtagaaaccagtttggaccacttcttttcaagggcaggtctagtgggggtgatcaatgtgcaagatggtggtacaca-------gaaggggttcgaggtgtgggacgtggacgtgatgggatttgtacagctcagaaggaagttggagatgtttacatacatgagatttaacgctgagttcacattcgtgtccacacttgcggacggcacaactcccagggtgatgttacaatacatgtatgtcccacccggtgctcccaagcctcaagagagggattcgtttcaatggcaaacagcaactaacccatcagtgttctgcaaaatgagcgatccccccccacaagtctccgtccctttcatgtcaccagccagtgcgtatcagtggttctatgacgggtatcctacatttgatgatcgacctgccacctcaaaccatccatatggtcaatgtcctaacaacatgatgggcacatttgcagtgcgatttgtcagcaagacccctgctactcgagacttgcgtgttagggtgtatatgcgcctcaaacacgtacgcgcttgggtaccgagacccatacgatcccaagcatatatcttaaagaactacccaaactatgacgggac----aaaaataacaccaacgtccaaggat-----------------------------aggcaaagcatt-------------aaaacaactggg------------------------------------------aaattcggtcagcagtccggtgccatttatgttggcaattacagagtagttaacagacaccttgccacacataatgactgggctaacttagtatgggaagacagttcaagggatctccttgtgtcgtccacgactgcccaaggatgtgacgtcattgctcgttgcaactgccaaactggagtgtactactgtagctcccgaagaaagcactacccggttagtttttcaaagcctagcctgatctacgtggaggccagtgagtattacccggctaggtatcagtctcacctcatgctcgcgcaaggacactcagaacctggcgattgtggtggcatcctcaggtgccagcacggtgttgtcggtatagtgtccactggtggcaatggacttgtcggctttgcagatattagggacctcctttggctagatgaggaggcgatggagcaaggtgtgtctgattacattaag-ggactcggtgatgcatttggaactggcttcaccgacgctgtctccagagaagtggaggctcttaagaaccacctaattggttctgaaggggctgttgagaaaatccttaagaatctgatcaagttaatctccgctcttgtcatcgtgattaggagtgattatgacatggtcacccttacagcaactctagctttaattggctgtcacggcagtccttgggcgtggatcaaagcaaagacagcatccattttaggcatccctattgctcaaaaacagagcgcctcctggcttaagaagtttaacgatatggccaacgctgctaagggattggagtggatttccaacaagatcagcaaatttatcgattggctcaaggagaaaatcataccagcagccaaggagaaggttgagttcctaaataacctgagacaactgcca-ctgttagagaaccaaatctcaaacttagaacaatctgccgcctcacaagaagatcttgaggctatgtttgggaatatatcgtacttagccca---------cttttgccggaaattccaaccactatatgctatagaagccaaaagagtctacgctttagagaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctcatcatcaggggatcgccgggcactggaaaatctttggcaaccggcatcatcgcccgggcaatagctgataagtatcattctagtgtgtactccctcccaccagacccagatcactttgatggatacaaacaacaggtggttaccgttatggatgacttatgccagaaccctgacggtaaggacatgtctttgttctgtcaaatggtgtccactgtggatttcatccctccaatggcttccctcgaggagaaaggggtgtctttcacctctaaatttgtcgtcgcgtccactaatgccagcaacattatagtgccaacagtgtcagattctgacgctatccgccgcagattttatatggattgtgacattgaggtgacagattcatacaaaacagacttgggcagattggatgccggtcgggccgccaagctatgctctgagaataacactgccaactttaaacgctgcagccctctggtatgcgggaaagccattcaactcagagacaggaaatccaaggttagatatagcgtggatacagtggtgtctgaactcattagggagtacaacaatagatctgccattggaaacacaattgaagccttgttccagggaccacccaagtttaggccaattaggatc---agccttgaggagaagccagctccagatgctattagtgaccttcttgctagcgtggatagcgaggaggtacgccagtattgc-agagaccaaggctggatcatcccagagactcccacaaatgttgagcgacacctcaacagagctgtgctgatcatgcagtccatcgccacagtggtagcggttgtctctttggtgtatgtcatctataagctctttgctggattccagggtgcttactctggtgcccctaagcaggcacttaagaaacctgttctccgcacggcaacagtgcaaggcccaagtctcgactttgccttatcactattgaggaggaatatcaggcaggtccagacagatcaagggcactttaccatgttgggagtcagggatcgcttagctgtccttccgcgacactcacaacctggaaagacaatctgggtagagcacaagctcgtgagcattctggatgccgtcgagttagtggacgaacagggggtcaatttagagctgaccttagtcaccttagacaccaatgagaagttcagagatattaccaaattcatcccagaaagcatcagcgctgctagtgatgccactttagtgatcaacacagagcatatgccttcaatgtttgtgccggtaggtgacgtcgtgcagtatggctttctgaatcttagtggaaagccaactcaccgcactatgatgtacaactttcccactaaggcaggtcagtgtggaggagtagtcacatcagttgggaaggtcattggcattcacataggcggtaatggcaggcaaggtttctgtgcgggactcaagagaagctattttgctagtgagcaaggagagatccaatgggtaaagcccaacaaggagactgggagacttaacatcaatgggccaacccgtactaaactcgagcctagtgtgttccatgaagtctttgaaggcaataaggaaccggcagtcttacacagtaaagactctcgccttgaggtggattttgaacaggcgttgttctccaagtacgtgggcaatacattacatgagcctgatgagtacgttagagaagcagctcttcactatgcaaaccagttgaagcaactggacatagacacttctcagatgagcatggaggaggcttgttacggcacagacaacctcgaagctattgacctgcacactagcgctggttacccctatagtgccctggggataaagaaaagagatatactagaccccactaccagagatgtgagcaagatgaagttctatatggataaatatggccttgatctcccttattccacctatgttaaggatgaacttcgctcaatagataaaatcaagaaagggaaatcccgtctgattgaagctagcagcttgaatgactcagtctatctcaggatgacttttggacacctttacgaaacttttcatgcaaaccctggaactgtaactggctcagctgttggatgtaatccagatgtgttttggagcaagttgccaatcttactccctggttccctcttcgcttttgactactcgggctatgatgctagccttagtccagtctggtttagagctcttgagttagtccttagagaaataggctatagtgaggaggcagtgtcactcattgagggaattaaccacacacatcatgtgtatcgcaacaaaacctattgcgtgcttggtggaatgccctcagggtgctcaggaacatccattttcaattcaatgatcaacaacatcatcattagagcattactcatcaaaacatttaagggaattgatttggatgaacttaacatggttgcttatggggacgatgttctggctagctaccctttcccgattgattgtctggagctagccaaaacaggtatggagtatggtctaactatgactcctgcagataagtccccatgtttcaacgaggtcaattgggcaaatgcaacctttcttaaaagaggtttcctacctgatgagcaattcccattcttgatccaccctactatgccaatgaaggaaattcacgagtccatacgctggaccaaagacgcacgaaatactcaggatcatgtgcgctctctttgccttctggcatggcacaatggtaaacaagaatatgagaaatttgtgagcacaattagatctgtcccagtagggaaagcattggctattccgaactatgaaaacctgagacgcaattggctcgaattattct-----agaggttaaac-------------------------acacg-------------actcaaccc-caccagca----atctggt------c-g-----tgtaaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM609475.1_Coxsackievirus_A8_isolate_CVA8/SZ93/CHN/2012_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactctgattctacggaatccttgtgcgcct-g-ttttaga-----gcccc---t---tccc-c---c-aa--t-gtaatttagaag--------------caaagtactaac-gatcaa-cagcaggcgtggcgcaccagccatgtctcga-tcaagcacttctg-ttcccccggacagagtatcaatagactac-tcacgtggttgaaggagaaaacgtccgttatccggctaactacttcgagaaacc-tagtaacaccattgaagctgcagagcgtttcgttcagca--ctt-acccc---gtgtagatcaggtcgatgagtcactgca-ttccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtca-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgtggagcgcataccctcaaacca-ggggg-cggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attttcttactggctgcttatggtgacaattgaa-------gaattgttgccatatagctattggattggccatccgg--tgtgtaacagagcaatcatc-----tatttg----tttgtc-gggtatatcccac-----taacgct--------------caactcttttaac-acattacaatatatactaatcctgaatacaagaaa-------atgggagcacaggtttcaacacaaaagtctggtagccacgagactagcaatgtagccactg-aagggtccaccatcaactttactaatatcaattattacaaggactcgtacgcagcttcggctagcaagcaggacttcactcaggaccctactaggttcactagccctgtgcttgatgcgctgagggaagtggcacctccattgaagtcaccctcagtggaggcgtgcggatacagtgacagggtagcacagttgactgttggtaattcaacaatcaccacgcaagaggctgccaatatagttcttgcttacggggaatggcctgagtactgtcccgacaaagatgccaccgctgtagataagcctacacgccctgacgtgtcggttaatagattctataccatgtctacgcaaatgtggcaggaca------------------cctcgaaagggtggtactggaagttcccagatgttctcaccaagactggtgtctttggacaaaatgcccagtaccattacctgtacagatctgggttctgcatacacgttcaatgcaacgctagtaaatttcatcaaggagcactgttagtggctgctatcccggagatggtgttgggagccaatagttcagatcccaagcccaacactgcaaaac---accctgaattcactacgacaatgccaggcgctaacggtggtactttcgaaaatccctatattatggatatgggggtccccttgagccaagctttggtgtttccacaccagtggattaacctgcgcactaacaactgtgcaaccatcatagtaccttacattaatgctgtcccatttgactctgccattaaccacaacaactttacgttagccgtaattccaattagcccattaaaatactgcacaggagcgacaacggccattcccataacagtaacgatagccccattaaattctgagttttgtggattgaggcaggccacaacacagggaataccagtggagctaaaacctggcaccaatcaatttctgacgactgacaatgaggtctccgtgccaatcttacctggtttccaacctacaccagtcatacatataccaggggaggtgaataacctcctggagctctgccagatcgagtctatcttggaggtcaataa----------t------gtgactgggcaagaaggg------ataaatcgactccttatcccagtctctacacagagtg------ataaggacactttgtgtgcatcactcagagtcgatccaggtagggatggaccttggcaatctactttggttgggcaaatatgtaggtactacacccagtggtctggctcattagagatcacattcatgtttactggctcattcatggcaaccggtaaaatgctaatagcttactccccacctgggagcgcgcaaccaacaacaagagacctagcaatgctcggcacgcatgtagtgtgggatttcgggttgcaatcatccatcactttagtgatcccatggattagtaatacacacttcaggacaggcaaagtgggcggttactttgattactatgcgtctggcatagtaaccatttggtatcagacaaacttcgttgtgcctcccgacacgccgagccaagctcatataatagcgttgggagctgcccagaagaatttcacacttaagctgtgtaaggacacagatgaggtcacacaacaagctgtgttgcagggggacccc--------attgaggacataataa---ctaacacagt-----ctctcgcacactgcagcaaattagcgctccaactcatggtacc--------------------------------actgcagcaaacaccactgtgagcaaccataagataggcactggagatgttccagctctccaggctgcggagacaggtgctacctctaacgcctcagatgagaacatgattgagacacgctgtgtgctaaatcgcaatggagtcgtagaaaccagtttggaccatttcttttcaagggcaggactagtaggggtgatcaatgtgcaagatggtggtacaca-------gaaggggttcgaggtgtgggacgtagacgtgatgggatttgtgcagctcagaaggaagttagagatgtttacatacatgagatttaacgctgagttcacatttgtgtccacactcgcagacggcacaactcccagggtgatgttacagtacatgtatgtcccacctggtgcccccaagcctcaagagagggattcgtttcaatggcaaacagcgactaacccatcagtgttctgcaaaatgagcgatcctcccccacaagtctctgtccctttcatgtcaccagccagtgcgtatcagtggttctatgacgggtaccctacatttgatgatcgacctgctacctcaaaccatccatacggccaatgtcctaacaacatgatgggcacatttgcagtgcgatttgtcagcaagacccctgctactcgagatttgcgtgttagggtatacatgcgcctcaaacacgtacgtgcttgggtaccgagacctatacgatcccaagcgtacatcttgaaaaactacccaaactatgatgggac----aaatataacaccaacatccaaggat-----------------------------aggcaaagcatt-------------aaaacgactggg------------------------------------------aaattcggtcagcagtccggtgccatttatgttggcaattacagagtagttaacagacaccttgccacacacaatgactgggctaacttagtatgggaagacagttcaagggatctccttgtgtcgtccacgactgcccaaggatgtgatgtcattgctcgttgcaattgccagactggagtgtactactgtagctcccgaagaaggcactacccggttagtttttcaaagcctagcctgatctacgtagaggccagtgagtattacccggctaggtatcagtctcacctcatgctcgcgcaaggacactcagaacctggcgattgtggtggtatccttaggtgccagcacggtgttgtcggcatagtgtctactggtggcaatggacttgtcggttttgcagatgtcagggacctcctttggctagatgaggaggcgatggagcaaggtgtgtctgattacattaaa-ggactcggtgacgcatttggaactggcttcaccgacgctgtctccagagaagtggaggctcttaagaaccacctaattggttctgaaggggctgttgagaaaatcctcaagaatctgatcaagttaatctctgctcttgtcattgtaattaggagtgattacgacatggtcacccttacagcaaccctagctttaattggctgtcatggcagtccttgggcgtggatcaaagcaaagacagcatctattttaggcatccctattgctcaaaaacagagcgcctcctggcttaagaagtttaatgatatggccaacgctgctaagggattggagtggatttccaacaagatcagcaaatttatcgattggctcaaggagaaaatcataccagcagccaaggagaaggttgagttcctaaataacctgaaacagctgcca-ctgctagagaaccaaatttcaaacctagaacaatctgccgcctcacaagaagaccttgaggctatgtttgggaatgtatcatacttagccca---------cttttgccgtaaattccaaccattatatgctatagaagccaaaagagtctacgctttagagaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcattatcaggggttcgccgggcactggaaaatctttggcaactggcatcattgcccgggcaatagctgacaagtatcactctagtgtgtactccctcccaccagacccagatcactttgatgggtataaacaacaggtggttactgttatggatgacttatgccagaaccctgacggtaaggacatgtctttgttctgtcaaatggtgtccactgtagatttcatccctccaatggcttcccttgaggagaaaggggtgtctttcacctctaaatttgtcatcgcgtccactaatgccagcaacattatagtgccaacagtgtcagattctgatgctatccgccgcagattttatatggattgtgacattgaggtgacagactcatacaaaacagacttgggcagattggacgccggtcgggccgccaaactatgctctgagaacaacactgccaacttcaaacgctgcagccctctggtgtgcgggaaagctattcaactcagagacaggaaatctaaggttagatatagcgtggatacagtggtgtctgagcttgttagggagtacaacaatagatctgccattggaaacacaattgaagccctgttccagggaccacccaagtttaggccaattaggatc---agccttgaggagaggccagctccagatgctattagtgaccttcttgctagcgtggatagcgaagaggtacgccagtactgc-agagaccagggctggatcatcccagagactcccacaaatgttgagcgacacctcaacagagctgtgctgattatgcagtccatcgccacagtggtagcggttgtctctttggtgtatgttatctataagctcttcgctggattccagggtgcttactctggtgcccctaagcaggcactcaagaaacctgttctccgcacggcaacagtgcagggcccaagtctcgactttgccttgtcactattgagaaggaatatcaggcaagtccagacagaccaagggcactttaccatgttgggagtcagaaatcgcttagctgtccttccgcgacactcacaacctggaaagacaatctgggtagagcacaagctcgtgagtgttctcgatgccgtcgaactagtggacgaacagggagtcaatttggagctgaccctagtcaccttagacaccaatgagaagttcagagatattactaaattcatcccagaaagcattagcgctgctagtgacgccactttagtgatcaacacagagcatatgccttcaatgtttgtgccagtaggtgacgtcgtgcagtacggctttctaaatctcagtggaaagccaactcaccgcactatgatgtacaactttcccactaaggcaggtcagtgcggaggagtagtcacatcagttgggaaggtcattggtattcacataggcggtaatggcaggcaaggtttctgtgcgggactcaagagaagctactttgctagtgagcaaggagagatccaatgggtaaagcccaacaaggagactgggagacttaacatcaatgggccgacccgtactaaactcgagcctagtgtgttccatgaagtctttgaaggcaataaggaaccggcagtcttgcacagtaaagactctcgcctcgaggtggattttgaacaggcgttgttctccaagtacgtggggaatacattacatgagcctgatgagtacattagagaagcagctcttcactatgcaaaccagttgaagcaactggacatagacacttctcagatgagcatggaggaggcttgctacggcacggacaacctcgaggctattgacctgcacactagcgctggctacccctatagtgctctggggataaagaaaagagatatactagaccccactaccagagatgtgggcaagatgaagttctatatggataaatatggccttgatctcccttataccacttatgttaaggatgagcttcgctcaatagataagatcaagaaagggaagtctcgtctgattgaagctagcagcttgaatgactcggtctatctcaggatgacttttgggcacctttatgaaacttttcatgcaaaccctggaactgtaactggctcagctgttggatgcaatccagatgtgttttggagcaagttgccaatcttgctccctggctccctcttcgcttttgactactcgggctatgatgctagccttagcccagtctggttcagagctcttgagttagtccttagagaaataggctatagtgaggaggcagtgtcactcattgagggaatcaaccacacacaccatgtgtatcgcaacaaaacctattgcgtgcttggtgggatgccctcaggatgctcaggaacatccattttcaattctatgattaacaacatcatcattagggcactgctcatcaaaacatttaaggggattgatttggatgaacttaacatggttgcttatggggacgatgttttggctagctaccctttcccgattgattgcctggagctagctaaaacaggtatggagtatggtctaactatgactcctgcagataagtccccatgtttcaacgaagtcaattgggcaaatgcaacctttcttaagagaggtttcctacctgatgagcaattcccattcttgattcaccctactatgccaatgaaggaaatccacgagtccatacgctggaccaaagacgcacgaaatactcaggatcatgtgcgttctctttgccttctggcatggcacaatggtaaacaagaatatgagaaatttgtgagcacaattagatctgtcccagtagggaaagcattggctattccgaactatgaaaacctgagacgcaattggctcgaattattct-----agaggttaaac-------------------------atacg-------------actcaactc-caccagca----atctggt------c-g-----tgtaaat-a-actg--------gtggaggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM609476.1_Coxsackievirus_A8_isolate_CVA8/SZ124/CHN/2012_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactctgattctacggaatctttgtgcgcct-g-ttttaca-----acccc---c---tccc-c---c-ta--t-gtaacttagaag--------------caatgcaccaat-gatcaa-cagcaggcgtggcgcaccagccatgtcttga-tcaagcacttctg-tttccccggacagagtatcaatagactgc-tcgcgtggtcgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtagcaccaatgaagctgcagagcgtttcgctcagca--ctt-acccc---gtgtagatcaggccgatgagtcactgcg-ttccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtca-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcataccctcaaacca-ggggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attttcttaatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatcagg--tgtgtaacagagcaattatc-----tacttg----tttgta-ggatataccccat-----taacgtt--------------caaatctcttaac-acactacagtacatactaactttgaacacaagaaa-------atgggagcacaagtttcgacacaaaagtctggtagccacgagactggcaacatagccactg-aagggtccaccattaactttactaacatcaattattacaaggactcgtacgccgcctcggctagcaaacaggacttcacccaggatcccactaggtttactagccctgtgcttgatgcgctgagggaagtggcacctccattaaagtcaccctcagtggaagcgtgcggatacagtgatagagtagcgcagttgactgtcggtaattcaacaatcaccacacaagaggctgctaacatagtccttgcttacggggaatggcctgagtactgtcccgacaaagacgccaccgctgtagataagcctacacgccctgatgtgtcggttaatagattctacaccatgtctacgcaaatgtggcaggaca------------------catcgaaagggtggtactggaagttcccagatgttcttaccaagactggtgtctttggacaaaatgcccagtaccactacttgtacagatctggattttgcatacatgtccaatgcaacgctagtaaattccatcaaggagcactgttagtggctaccatcccagagatggtgttaggagccaatagctcagatcccaagcccaacactgcaaagc---accctgaattcactacaacaatgccaggtgctaatggtggaacttttgaaaatccctatatcttggacatgggggttcccttgagccaagctttggtgtttccacaccaatggatcaacctgcgcactaacaactgtgcaaccatcatagtaccttatattaatgctgttccatttgattcagccattaaccacaacaacttcacgctagtcgtaattccgattagcccgttaaaatactgcacaggagcaacaacagccatccctataacagtaacgatagccccattaaattctgaattttgtggattgaggcaagccacatcgcagggaataccagtggagctaaaacccggcaccaatcaatttttgacaactgataacgaagtctccgtaccaatcttacctggtttccagcctacaccggttatacatataccaggggaggtgaacaacctcctggagctctgccaggttgaatctatcttggaggtcaataa----------t------gtgactggacaagaagga------ataaatcgactccttatcccggtttctacacaaagtg------acaaggatactttgtgtgcatcactcagagttgatccaggtagggacggaccatggcaatctactttggttgggcaaatatgtaggtattacacccagtggtctggttcattagagatcacattcatgtttactggctcgttcatggcaaccggtaaaatgctgatagcttactccccgcctgggagtgcgcaaccaacaacaagagacctggcaatgctcggcacgcacgtagtgtgggattttgggttgcaatcatctattactcttgtgatcccatggattagcaacacacacttcagaacaggcaaggtgggtggttactttgattactatgcgtctggtatagtaactatttggtatcagacaaacttcgtcgtgccccccgacacaccgagtcaggctcatataatagcgttgggagctgcccagaagaatttcacgctcaaactgtgcaaggatactgatgaggttacacaacaagcagtgttgcagggggacccc--------attgaagacataataa---ctagcacagt-----ctcccgcacattgcagcaaattagcactccaacacatagcact--------------------------------actgcagcaaacacctctgtgagtaaccataagataggcactggagatgttccagctctccaagctgcggagacaggtgctacctctaacgcctcggatgagaacatgatcgagacacgctgcgtgctaaatcgcaatggagtcgtggaaaccagtctggaccacttcttctcaagagcaggtctggtgggggtgatcaatgtgcaagatggtggtacaca-------gaagggatttgaggtgtgggatgtggatgtgatggggtttgtacagctcagaaggaagttggagatgtttacatacatgagattcaatgctgagtttacatttgtgtccacacttgcagacggcacgactcccagggtgatgatacagtacatgtatgttccacctggtgcccccaaacctcaagagagggattcattccaatggcaaacagcgaccaacccgtcagtgttttgcaagatgagcgatcctcccccacaagtctctgtccctttcatgtcgccagccagcgcgtaccaatggttctatgatggatatcccacatttgatgatcgacctgccacctcaaaccacccgtatggacagtgccctaataacatgatgggcacatttgcagtgcgatttgtcagcaagacccctgctacacgagacttgcgtgttagggtatatatgcgcctcaaacacgtgcgcgcttgggtaccgaggcccatacgatcccaagcatacatcttaaagaactatcctaactatgacgggac----aaatataacaccaacatccaaggac-----------------------------aggcaaagcatc-------------aaaacggctggg------------------------------------------aaatttggtcagcagtccggtgctatttatgtgggcaattacagagtggttaacagacaccttgccacacacaacgactgggccaacttagtatgggaagacagctccagggatctccttgtgtcatccacgactgctcaaggatgtgacatcattgctcgttgcaattgccagactggagtgtattactgtaactctcaaagaaaacactacccagttagcttttcaaggcctagcctgatctatgtggaagctagtgagtattacccagctaggtatcaatctcaccttatgctcgcacaaggacactcagaacctggcgattgtggtggcatcctcaggtgccagcacggcgttgtcggtatagtgtccactggtggtgacggactcgtcggcttcgcagacgtcagggatctcctttggttagatgaggaggcgatggagcaaggtgtgtctgattacatcaag-ggactcggtgatgcatttggaactggcttcactgatgctgtctctagagaagtggaggcccttaaaaaccacctaattggttctgaaggagctgttgaaaaaatcctcaagaatttgatcaagttaatctctgctcttgtcattgtgattaggagtgattatgacatggtcacccttacagcaactctagctttaatcggatgtcacggtagtccttgggcatggattaaagcaaagacagcatctattttaggcatccctattgctcaaaaacagagcgcctcctggcttaaaaagttcaacgatatggccaacgctgctaagggactggaatggatttccaacaagatcagcaaattcatcgaatggctcaaggaaaaaatcataccagcagccaaggagaaagttgagtttttaaataacttgaagcagttacca-ctgctagagaaccaaatctctaatctggaacaatctgctgcctcacaagaggaccttgaagttatgtttgggaatgtgtcatatctagctca---------cttctgtcgtaagtaccagccactatatgctacagaagccaaaagagtctacactctagagaagaggatgaacaactacatgcagtttaagagcaaacaccgtattgaacctgtatgtcttatcatcaggggttcaccgggcactgggaagtctctagcaactggcatcattgctcgagcgatagctgataagtatcactccagtgtctattcactcccaccagacccagaccactttgatgggtacaagcagcaagtggttacagtcatggatgatctatgtcagaatcctgacggcaaagatatgtcactgttttgccaaatggtgtctaccgtggacttcattcctccaatggcttccttagaagagaagggggtctctttcacatctaagttcgtcattgcatccactaatgctagtaatatcatagtgccaacagtatctgatgcagatgccattcgccgcaggttctatatggattgtgacattgaagtaacagactcatataaaacagacctgggtaggttggatgccgggcgagcagccaaattgtgttctgagaacaacacagcaaatttcaagcgttgcagcccattagtgtgtggaaaggctattcagttaagagacaggaaatctaaggtcagatacagcgtggacacagtggtctctgaactcataagagagcacaataacagatccgccattggtaacacaattgaggctttgttccagggcccacccaaatttagacccataaggatt---agtcttgaagaaacgccagccccagatgctattagtgatcttctcgctagtgtggacagcgaagaggtacgtcaatactgt-agggatcaaggttggattattccggaaactcctacaaatgttgaacgacacctcaacagagctgtgttagttatgcaatccatcgccacggtagtggcggttgtctcattggtgtacgtcatctataaactctttgcagggttccagggcgcatattctggtgcccccaagcaaacgcttaagaaacctgttctccgcacagcaacagtgcagggtccaagccttgattttgccctatcactattgagaagaaacattaggcaagtgcagacagatcaagggcacttcaccatgctgggtgtcagagatcgcttggctgtcctcccgcgacattctcaacctggaaggactatctgggtggaacacaagctcgtgaacgtcctggatgctgtcgagctggtggatgaacaaggggtcaacttagagctgactttaatcaccctcgacaccaatgagaaattcagggatgtcaccaagttcattccagaaaccatcagtggtgccagcgatgccaccttagtgatcaatacagagcacatgccctcaatgtttgtgccagtaggtgatgttgtgcagtatggcttcctaaatctcagcgggaaaccgactcatcgcactatgatgtataacttccctactaaggcaggacaatgtggaggggtggttacatcggttggaaagatcattggcattcatataggaggtaatggtaggcagggattttgtgcaggactcaagagaagctactttgctagtgagcagggagagatccaatgggttaaacctaataaggaaacaggaagactcaacatcaatggaccaactcgtaccaagctcgagcctagtgtgtttcatgatgtctttgagggtgacaaggagccagcagttttgcataataaggaccctcgccttgaggtggacttcgagcaagcattgttctccaagtacgtggggaacacactacacgaacctgatgagtacatcagggaggcagccctccactacgcgaaccaattaaagcagctggacataaatacctctcagatgagcatggaggaggcctgctatggcacagaaaaccttgaggctattgaccttcacactagcgcgggatacccctatagtgcgctgggaataaaaaagagggatatattagaccccattaccagagatgtgagcaagatgaagttctacatggataagtacggtcttgacctcccttactccacctatgtcaaagatgagcttcgctcaatagataagattaagaaggggaaatctcgcttgatagaagctagcagcttgaatgactcggtctaccttagaatggcttttgggcacctctatgaaactttccatgcgaaccctggcactgtgactggctcagctgtggggtgtaacccagatgtattttggagcaaactaccaatcctgcttcctggttccctcttcgcttttgactactcaggttacgacgctagcctcagcccagtttggttcagagcactggaattagtccttagagagataggttatggtgatgaggcagtctcactcattgaaggaatcaaccatacgcaccatgtgtaccgtaacaaaacctattgtgtacttggtggaatgccctcaggttgctcaggaacatccatcttcaactcaatgattaataacatcatcatcagagcattacttattaaaacattcaagggcattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccgattgactgcctggagctagcaaagacaggaaaggagtatggtctaaccatgacccctgcagacaagtccccttgcttcaatgaagttaattgggaaaacgcaaccttcctcaagagaggcttcttacctgatgagcaattcccgtttttgatccaccccaccatgccaatgaaggagattcatgaatctattcggtggaccaaggatgcacgcaacactcaagatcacgtgcggtctctgtgtctattggcatggcataacggtaagcaagaatatgaaaaatttgtgagctcaattagatccgtcccagtaggaaaagcattagcaatccccaactatgaaaatctgagacgtaaatggctcgaattgtttt-----agaggttggat-------------------------aaacg-------------actcaaccc-cactagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KM609478.1_Coxsackievirus_A8_isolate_CVA8/SZ141/CHN/2012_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactctgattctacggaatctttgtgcgcct-g-ttttata-----acccc---c---tccc-c---c-aa--t-gtaatttagaag--------------caatgcaccaat-gatcaa-cagcaggcgtggcgcaccagccatgtctcga-tcaagcacttctg-tttccccggacagagtatcaatagactgc-tcgcgtggtcgaaggagaaaacgtccgttacccggctaactacttcgagaaacc-tagtagcaccaatgaagctgcagagcgtttcgctcagca--ctt-acccc---gtgtagatcaggccgatgagtcactgcg-ttccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtca-cccataggacgctctaatgtggacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcataccctcaaacca-ggggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcttaatggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgtgtaacagagcaattatc-----tacttg----tttgca-ggatttaccccat-----taacgtt--------------caaatctcttaac-acactacagtacatactaaccttgaatacaagaaa-------atgggagcacaagtttcgactcaaaagtctggtagccacgagactggcaacatagccactg-aagggtccaccattaactttactaacatcaattattacaaggactcgtacgccgcctcggctagcaaacaggacttcacccaggatcctactaggtttactagccctgtgcttgatgcgctgagggaagtggcacctccattaaagtcaccctcagtggaagcgtgcggatacagtgatagagtagcgcagttgactgtcggcaattcaacaatcaccacacaagaggctgctaacatagtccttgcttacggggaatggcctgagtactgtcccgacaaagacgccaccgctgtagataagcctacacgccccgatgtgtcggttaatagattctacaccatgtctacgcaaatgtggcaggaca------------------cctcgaaagggtggtactggaagttcccagatgttcttaccaagactggtgtctttggacaaaatgcccagtatcactatttgtacagatctggattttgcatacatgtccaatgcaacgctagtaaattccatcaaggagcactgttagtggctgccatcccagagatggtgttaggatccaatagctcagatcccaagcccaacactgcaaagc---accctgaattcactacaacaatgccaggtgctaatggtggaatttttgaaaatccctatatcttggacatgggggttcccttgagccaagctttggtgtttccacaccaatggatcaacctgcgcactaacaactgtgcgaccattatagtgccttatattaatgctgttccatttgattcagccattaaccacaacaacttcacgctagtcgtaattccgattagcccgttaaaatactgcacaggagcgacaacagccatccctataacagtaacgatagccccattaaattctgaattttgtgggttgaggcaagctacatcgcagggaataccagtggagctaaaacccggcaccaatcaatttttgacaactgataacgaagtctccgtaccaatcttacctggtttccagcctacaccggttatacatataccaggggaggtgaacaacctcctggagctctgccaggttgaatctatcttggaggtcaataa----------t------gtgactggacaagaaggg------ataaaccgactccttatcccagtttctacacaaagtg------acaaggatactttgtgtgcatcactcagagtcgatccaggtagggacggaccgtggcaatctactttagttgggcaaatatgtaggtattacacccagtggtctggttcattagagatcacattcatgtttactggttcattcatggcaaccggtaaaatgctgatagcttactccccgcctgggagtgcgcaaccaacaacaagagacctggcaatgctcggcacgcacgtagtgtgggattttgggttgcaatcatctattactcttgtgatcccatggatcagcaacacacacttcagaacaggcaaggtgggtggttactttgattactatgcgtctggtatagtaactatttggtatcagacaaacttcgtcgtgccccccgacacgccgagtcaggctcatataatagcgttgggagctgcccagaagaatttcacgcttaaactgtgcaaggatacagatgaggtaacacaacaagcagtgttgcagggggacccc--------attgaagacataataa---ctagcacagt-----ctcccgcacattgcagcaaattagcactccaacacatagcact--------------------------------actgcagcaaacacctctgtgagtaaccataagataggcactggagatgttccagctctccaagctgcggagacaggtgctacctctaacgcctcggatgagaacatgatcgagacacgctgcgtgctaaatcgcaatggagtcgtggaaaccagtctggaccacttcttctcaagagcaggtctggtgggggtgatcaatgtgcaagatggtagtacaca-------gaagggatttgaggtgtgggatgtggatgtgatggggtttgtacagctcagaaggaagttggaaatgtttacatacatgagattcaatgctgagtttacatttgtgtccacacttgcagacggcacgactcccagggtgatgttacagtacatgtatgttccacctggtgcccccaaacctcaagagagggattcattccaatggcaaacagcgaccaacccgtcagtgttctgcaaaatgagcgatcctcccccacaagtctctgtccctttcatgtcgccagccagcgcgtaccagtggttctatgatggatatcctacatttgatgatcgacctgccacctcaaatcacccgtatggacagtgccctaataacatgatgggcacatttgcagtgcgatttgtcagcaagacccctgctatacgggacttgcgtgttagggtatatatgcgcctcaaacacgtgcgcgcttgggtaccgaggcccatacgatcccaagcatacatcttaaagaactatccaaactatgacgggac----aaatataacaccaacatccaaggac-----------------------------aggcaaagcatc-------------aaaacgactggg------------------------------------------aaatttggtcagcagtccggtgctatttatgtgggcaattacagagtagttaacagacaccttgccacacacaatgactgggccaacttagtatgggaagacagctccagggatctccttgtgtcatccacgactgctcaaggatgtgacatcattgctcgttgcaattgccagactggagtgtattactgtaactcccaaagaaaacactacccagttagcttttcaaagcctagcctgatctatgtggaagctagtgagtattacccagctaggtatcaatctcaccttatgctcgcacaaggacactcagaacctggcgattgtggtggtatcctcaggtgccaacacggcgttgtcggcatagtgtccactggtggtgacggactcgtcggcttcgcagatgtcagggatctcctttggttagatgaggaggcgatggagcaaggtgtgtctgattacatcaag-ggactcggtgatgcatttggaactggcttcactgatgctgtctctagagaagtggaggcccttaaaaaccacctaattggttctgaaggagctgttgagaaaatcctcaagaatttgatcaagttaatctctgctcttgtcattgtgattaggagtgattatgacatggtcacccttacagcaactctagctttaatcgggtgtcacggtagtccttgggcatggattaaaacaaagacagcatctattttaggcatccctatcgctcaaaagcagagcgcctcytggcttaaaaagttcaacgatatggccaacgctgccaagggattggaatgggtttctaacaagatcagcaaattcatcgattggctcaaggaaaaaatcataccagcagccaaggagaaggtcgagtttttaaataacttgaaacagttacca-ctgctagagaaccaaatctctaatctggaacaatctgctgcctcacaagaggaccttgaagttatgtttgggaatgtgtcatatctagctca---------cttctgtcgtaagtaccagccactatacgctacagaagccaaaagagtctacactctagagaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttattatcaggggttcaccgggcactgggaagtctttagcaactggcatcattgctcgagcgatagctgataagtatcactccagtgtctattcactcccaccagacccagaccactttgatgggtacaagcagcaagtggttacagtcatggatgatctatgtcaaaatcctgacggcaaagatatgtcactgttttgccaaatggtgtctaccgtggacttcattcctccaatggcttccttagaagagaagggggtctctttcacatctaagttcgtcattgcatccactaatgctagtaatatcatagtgccaacagtatctgatgcagacgccattcgccgcaggttctatatggattgtgacattgaagtaacagactcatataaaacagacctgggtaggttggatgccgggcgagcagccaaattgtgttctgagaacaacacagcaaatttcaagcgttgcagcccattagtgtgtggaaaggctattcaattaagagataggaaatctaaggtcagatacagcgtggacacagtggtctctgaactcataagagagcataataacagatccgccattggtaacacaattgaggctttgttccagggcccacccaaatttagacccataaggatt---agtcttgaagaaacgccagctccagatgctattagtgatcttctcactagtgtggatagcgaagaggtacgtcaatactgt-agggatcaaggttggattattccggaaacccctacaaatgttgaacgacacctcaacagagctgtgttgattatgcaatccatcgccacggtagtggcggttgtctcattggtgtacgtcatctataaactctttgctgggttccagggcgcatattctggtgcccccaagcaaacgcttaagaaacctgttctccgcacagcaacagtgcagggtccaagccttgattttgccctatcactattgagaagaaacatcaggcaagtgcagacagatcaagggcacttcaccatgctgggtatcagagatcgcttggctatcctcccgcgacattctcaacctggaaggactatctgggtggaacacaaactcgtgaacgtcctggatgctatcgagctggtggatgaacaaggggtcaacttagagctgaccttaatcaccctcgacaccaatgagaaattcagggatatcaccaagttcattccagaaaccattagtggtgccagcgatgccaccttagtgatcaatacagagcacatgccctcaatgtttgtgccagtaggtgatgttgtacagtatggcttcctaaatctcagcgggaaaccgactcatcgcactatgatgtataacttccctactaaggcaggacaatgtggaggggtagtcacatcagttggaaagatcattggcattcatataggaggtaatggtaggcagggattctgtgcgggactcaagagaagctactttgctagtgaacagggagagatccaatgggttaaacctaacaaagaaacaggaagactcaacatcaatggaccaactcgcaccaagctcgagcctagtgtgtttcatgatgtctttgagggtgacaaggagccagcagtcttgcatagtaaggacccccgccttgaggtggacttcgagcaagcattgttctccaagtacgtggggaacacactacacgaacctgatgagtatatcagggaggcagccctccactatgcgaaccaattaaagcagctagacataaatacctcccagatgagcatggaggaggcctgttatggcacagaaaaccttgaggctattgaccttcacactagtgcgggatacccctatagcgcgctgggaataaaaaagagggatatcttagaccccattaccagagatgtgagcaagatgaagttctatatggataagtacggtcttgacctcccttactccacctatgtcaaagatgaacttcgctcaatagataagattaagaaggggaagtctcgcttgattgaagctagcagcttgaatgactcggtctaccttagaatggcctttgggcacctctatgaagctttccatgcgaaccctggcactgtgactggctcagctgtggggtgtaacccagatgtattttggagcaagctaccaatcctgcttcctggttccctcttcgcttttgactactcaggttacgatgctagcctcagcccagtttggttcagagcgttggaattagtccttagagagataggttatggtgatgaggcagtctcactcattgaaggaatcaaccatacacaccatgtgtaccgtaacaaaacctactgcgtacttggtggaatgccctcaggttgctcagggacatccatcttcaactcaatgattaataacatcatcatcagagcactacttattaaaacattcaagggcattgatctggatgaactcaacatggttgcctacggggacgatgtgctcgctagttacccctttccaattgactgcctggagctagcaaagacaggtaaggagtatggcctaaccatgacccctgcagacaagtccccttgcttcaatgaagttaattgggaaaatgcaaccttcctcaagagaggcttcttgcctgatgagcaattcccgtttttgatccaccccaccatgccaatgaaggagattcatgaatccattcggtggaccaaggatgcacgcaatactcaagatcacgtgcggtctctatgtctgttggcatggcataacggtaagcaagaatatgaaaaatttgtgagctcaattagatccgtcccagtaggaaaagcattggcaatccccaactatgaaaatctgagacgtaattggctcgaattgtttt-----agaggttggac-------------------------aaacg-------------actcaaccc-caccagaa----atctggt------c-g-----tgaatgt-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP765687.1_Coxsackievirus_A8_isolate_CVA8/SZ266/CHN/2014_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgccagcactctggtaatacgttacctttgtgcgcct-g-ttttacc-----tcccc---c---tacc-c---t-gg--a-acactttagaag--------------taaagcatatct-ggtcaa-tagaaggtgtggcgaaccagctgcatctcga-ccaagcacttctg-tttccccggactgagtatcaatagactgc-taacgcggtcgaaggagaaaacgttcgttatccggctagctacttcgagaagcc-tagtaacaccatgaaagttgcagagtgtttcactcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcaccgcg-acccccacgggcgaccgtggcggtggctgcgttggcggcctgcctgt--------ggggcaa-cccataggacgctctaatacagacatggtgtg-aagagcctattgagctagctagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacatgctcgtgaacca-gcgag-tagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttacattggctgcttatggtgacaattaaa-------gaattggcaccatatagctattggattggccatcctg--tgactaacagagctattata-----tatctc----tttgtt-ggatttgttccct-----tgaggct--------------cactacttataac-acactttgttttatattgactctcaattcagcaaa-------atgggagcacaggtgtcgacgcaaaagtccggttcgcatgagacaggaattgcagcaaccg-agggctccactataaacttcacaaatatcaattattataaggactcctatgccgcctctgcgagcaagcaagatttcactcaggaccccaccaggtttacaagcccggtattagatgcacttagggaggtagcgccaccacttaagtccccttcagtggaggcttgcgggtacagtgacagggtggcgcagttgacagtgggaaattcaaccataaccacgcaagaggcagcgaatatagttcttgcctatggagagtggcccgagtattgccccgatagggatgctactgcagtagacaaacccacgcgccctgatgtgtcagtgaacagattctatactatgtccacacaaatgtggcaggaca------------------catctaaagggtggtattggaagttccccgatgtattaaccaagacaggcgtattcggacaaaacgctcaatatcattatttgtatagatcgggattctgcatacacgttcaatgcaatgccagtaaattccatcaaggggctctattggtggcagcggtccctgagatggttcttggagccaacagttctgaccccaagcccaacacggcaaaac---accccgagtttgctaccactatgccgggtgctaatggagggacttttgagaatccgtacatcatggatgcgggaatccctctgagtcaagctctcatattcccgcatcagtggatcaacttgaggactaataattgtgccactataatagtgccatacatcaatgctgtgccatttgactcagccattaatcacaacaatttcaccttaatagtggtcccaattagtccattgaagtattgcactggcgctaccacggccattccaataacagtgacaatagctcctctcaactcggaattctgtgggctgagacaagctacttcacagggcattcccgttgagttgaagcctggaactaaccagtttctaacaacagataatgaggtctcagtaccaatattacctgggttccagccaacgccagcaatacatataccaggtgaggtgaacaacttgctggagctctgtcaagtggagtcaatattggaagtcaacaa----------t------gtaactgggcaagagggg------ataaatagacttttgatacccgtgtctacacagagtg------ataaggacactctgtgcgcatctctccgtgttgatcctggtagggatggaccatggcaatccaccctcgttggtcaaatttgcagatattatactcagtggtcagggtcactggagatcacatttatgttcactgggtcctttatggctacagggaagatgctgattgcttactctccacctggaagtgcacaaccaaccagcagggacttagctatgcttggcacacatgttgtctgggacttcggtttacaatcatccattacacttgtagtcccatggataagtaacacccactttagaactggtaaagttggtggatactatgattactatgcatcaggaatagtgactatttggtaccagacaaattttgtggttccgcctgacactcccagccaagcccatataatagcattgggtgctgcacagaagaactttaccctcaagctgtgcaaggatactgatgaggttacacaacaagctgttttgcaaggcgattcg--------attgaagacatcatca---ccagcactgt-----cacccgcaccttgcaacaaatcagtgccccaacacacaacaca--------------------------------acggccgctgacaccacagtgagtaatcacaaaattgggacaggagacgttccagccctccaagctgcagaaacaggtgccacttcgaatgcctcagatgaaagcatgattgaaacgcggtgtgtcctgaaccgcaatggagtggtggagactagtctagatcacttcttttcgcgtgctgggctagtaggggtaatcaacgtgcaagacggaggcactaa-------caagggctacgaagtttgggacatagatgtgatggggtttgtacagcttagaaggaagttggagatgtttacatacatgaggtttaatgcagaatttacattcgtgtcaactttagctgacggcacaacacccagagtgatgctgcagtacatgtatgtcccgcctggtgccccaaagccacaagagagagactccttccagtggcagacagccaccaacccctctgtgttctgtaaaatgagcgacccaccgccacaggtctccgtcccgtttatgtcaccagctagtgcataccagtggttttatgatggataccccacctttgatgatcggcctgccacctcaaaccacccgtacggccagtgccctaacaatatgatgggcactttcgcagtacggtttgttagcaaaacccctacagtgcgagacctgcgggttagggtgtatatgcgcttgaagcacgtgcgcgcctgggtgccaaggcctattcgatcacagccatacatactaaaaaattatccaaattatgatggggc----caagatagattccacatccaaagac-----------------------------aggcagagtatt-------------aaaaccactggg------------------------------------------aaattcggacaacaatcaggagcaatatatgttggcaactacagggtagtgaacagacatcttgctactcacactgactgggcgaatttggtgtgggaagacagcactagagatctactcgtctcttcaaccacggctcaggggtgtgacactattgcccggtgtgactgtcaaactggagtgtactattgtaactcccgaaggaaacattaccccgttagcttctcaaagcccagtctaatttttgtggaagccagtgaatactatcctgccagataccagtcccatcttatgcttgcagcaggccattctgaaccaggagattgcggaggcatcctaaggtgccagcacggtgttgttggtatcgtgtccaccggtggcaacgggcttgttggctttgcagatgttagggacctcctgtggctggatgaagaggcaatggagcaaggagtgtcagactacatcaaa-gggctcggtgatgcatttggaacagggttcaccgatgcagtgtctagggaagtggaagctctaaaaaatcacctcatagggtccgagggagctgttgagaaaatcttaaagaacctaatcaagttaatctcagcattggtcatagtgatcagaagtgattatgacatggtcactctcacagcaacattggccctgattggctgtcacggcagtccctgggcctggatcaaggctaaaacggcgtccatcctgggcataccaatcgcccaaaaacaaagcgcttcctggcttaaaaagtttaatgatatggctaatgctgctaaaggcttggagtggatatcaaacaagattagcaagttcattgattggctcaaggaaaagatcataccagcagctagggagaaggtagagtttctaaacaatctaaagcaattgcca-ttattggagaatcagatctcaaacctcgagcaatctgcagcatcacaagaagatcttgaagcaatgtttgggaatgtgtcttaccttgcaca---------tttctgtcgcaaattccaaccactctacgctacagaagctaagagggtctacgcactggagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggctccccaggcactggtaaatccttggccactggtatcatcgcccgagcgatagctgacaagtaccattctagtgtgtattcgctaccaccagatccagatcactttgatggttacaaacagcaagtggtcacagtcatggatgacttatgccaaaaccctgacggtaaggacatgtcactattctgtcagatggtgtccactgtggatttcattccaccaatggcctctttagaggagaaaggagtttctttcacatctaaatttgtcattgcatccaccaatgctagtaatatcattgtaccgactgtatctgactcagacgctattcgccgcaggttctacatggactgtgatattgaagtgacagactcatacaaaacagatttgggcagattggacgccgggcgtgctgctaaattatgttctgagaacaatacagcaaatttcaagcgctgcagccccttggtttgtggaaaggctatccaactaagagacagaaaatccaaagtcagatacagtgtggacactgtggtctctgagcttataagagagtacaataatagatctgctattggtaatacaattgaagccttgttccaaggcccgcccaagttcaggcccataaggatc---aaccttgaggagaagccagctccagacgccattagtgatctcctcgctagcgtggatagtgaagaagtgcgtcagtattgt-agagaccaagggtggattattccagagactcctaccaatgtcgagcggcatctgaacagagctgtgctagtcatgcaatccatcgccacagtagtagcggttgtttccttggtgtatgttatctacaaactctttgctggatttcaaggtgcatattctggcgctcccaaacaagtactcaagaaacctatcctccgcacggcgacggtacagggtccgagccttgattttgctctgtccttattgaggagaaacatcaggcaagtgcaaacagatcaggggcatttcaccatgttaggtgtcagggaccgtctagctgtcctcccgcgccactctcaaccaggaaaaacaatctgggtggagcacaaactagtgaacattctggatgcagttgagctagtggatgagcaaggggtcaatttagaattaaccttaatcacccttgataccaatgagaaattcagagacatcaccaagtttatcccagagaacatcggcgccgctagcgatgccaccctagtaatcaacactgaacacatgccctcaatgtttgttccagtgggtgatgtcgtgcaatacggttttttgaatcttagcggaaagccaacccaccgcaccatgatgtacaactttcccaccaaagcaggtcagtgcggaggggtagtgacatcagttggaaaagtcattggtatacacataggtggcaatggtagacaaggtttttgtgcaggacttaagaggagttactttgccagtgagcaaggggagatccagtgggttaagcccaataaagagacagggagactcaatatcaatgggccaactcacacaaagctcgaacccagtgtgttccatgatgtatttgagggaaacaaggagccagctgtcctgcacagcaaagacccccgtctcgaagtggatttcgagcaagccctgttctccaagtacgtagggaatacactacatgaacctgatgagtacatcagggaggcagcactccactatgcaaaccagttaaaacagttagacattgacacttctcagatgagtatggaggaagcttgttatggtactgagaaccttgaagctattgatctccacactagtgcaggttacccatatagtgccctgggaataaagaaaagagacatcctagatcctgtcactagggatgtgagcaagatgaaattttacatggacaagtatggcttggaccttccttactccacctatgtcaaggacgagcttcgctcagtagaaaaaatcaagaagggaaagtcccgcttaatcgaagctagcagcctcaatgattcagtgtacctcaggatggcttttgggcatctttatgagaccttccacgcaaaccccgggactgttaccggctcagccgtggggtgtaacccggatgtgttttggagcaagctaccaattttgctgcctggctcactctttgcctttgactactcgggttatgatgctagcctcagccccgtctggttcagagcactggaactagtccttagagagataggctatagtgaggaggcagtcttactcattgaggggattaaccatacacaccatgtgtaccgcaacaaaacttattgtgtgcttggtgggatgccttcgggctgctcgggaacatctatcttcaactcaatgatcaataacatcatcattagagcactgcttatcaagacatttaagggtattgatttagatgaactcaatatggttgcctacggggatgatgtgcttgccagttaccctttcccaattgactgtttagaactagcaaaaacaggcaaggagtatggcttgactatgactcctgcagacaagtctccctgcttcaatgagattaactggggtaatgcaacctttctcaaaagaggctttttgcctgatgaccagttccctttcttaattcaccctaccatgccaatgaaggagatccatgagtccattcgatggaccaaggatgcacgaaacacccaagaccatgtgcgatccttgtgtctcctagcatggcacaatggcaagcaggaatatgaaaaatttgtgaacacaattagatctgtcccaattgggaaagcattggccattccaaattatgaaaacctgagacgcaattggctcgaattgtttt-----agaggttaaat-------------------------acatg-------------actcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX156350.1_Coxsackievirus_A2_isolate_HeN13-6/HeN/CHN/2013_complete_genome
------------------ttaaaa--cag-ctc-tggggttg-t-acccacccgca-gggcccac-t-gggcgctagcacactgattctacggaacctttgtgcgcct-g-ttttata-----tccct---c---cccc-g-----aaaca-gcaacttagaagttg--------aacatttacac-----gaccaa-tagtgggcatggcgcgccagccatgtcttgg-tcaagcactcctg-tttccccggactgagtatcaataggctgc-tcacgtggctgaaggagaaagagttcgttacccggctaactacttcgagaaact-tagtaacaccatgaatgttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggctgatgagccactgca-aaccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaatacagacatggtgcg-aagagtctattgagctagttagtattcctccggcccctgaatgcggctaatcccaactgcggagcacatgccctcaatcca-gaggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgaa-------agattgttaccatatagctattggattggccacccgg--tgactaacagagctttaatt-----taccaa----ttcact-gggtttgtacctt-----tatcacc--------------tacagtttatcag-actttggtgtatctgttatatctcaacagtaagaa-------atgggggcgcagttttcaacccagcgttcaggttcccacgagacgagcaatgtagctcgcg-atggatcaaccatcaacttcacgaacatcaactactacaaggactcctatgcggcctcagcagccaagcatgacttcactcaggatcctggcaagttcacacaacccgtgctggatgctttacgcgaagcagtgccaccattacagtcaccgagtgctgaggcatgtggttatagtgatagagtggcgcagttgacagtcggcaattcgactatcactactcaagaagccgccaatataatagtgtcttacgctgagtggccagagtattgtccagacacagacgctactgcggtcgacaaaccaactcgcccggatgtgtcagtgaacagattctacaccatgccagcaaccttgtgggaaacag------------------aatcaaaaggatggtattggaagttccctgatttacttaatgagataggcgttttcgggcagaatgctcagtttcactacttatatagatcaggattttgcattcacgtgcagtgtaatgctagtaagttccatcaaggggctttgcttgtagcggtaattcctgagttcgttgtggctgagcaggatgccacccagaagcccaaca---cagcaaaacacccttcgttggaagccacacagcctggcaagaaaggaaaggcgttcagacacccttatgtccttgattgtggcgtgccactgagccaagcccttgtcttcccccaccagtggatcaacttgcgcaccaacaactgcgctaccatagtagtcccatatattaatgctttgccctttgattctgcaataaaccattccaatttttcactggcagtgatacccgtttgcccgttgaaatataacacaggtgctaccccctcgatacccatcacgattacagttgcacccttgtgctcggaatttgccgggttgcgccaagcagtcaagcaaggagtcccagtagagatgaaacctggaacaaatcaattcttaacaactgatgatggaacctcagcaccaatattacccggcttccaccccacaccaaccatacacatccccggtgaagttcatagcctactagagttgtgtcagattgagactatgcttgaggtgaacaa----------t------acatctaaggcagtggag------ctcgaccggttgagaatacctgtgtccgcacagagcg------ccgtggataccctgtgcgcggcctttagagtggaccctggtagggatggcccctggcaatccactatggtagggcaactatgcaggtattacacccagtggtctggctccctgaagattacatttatgttcactggctcattcatggccactgggaagatgctggtcgcctacacaccaccaggaggcgcacaacctgccacacgagagctagctatgttgggcacacatgtaatctgggattttggcctgcaatcgtcagttacattagtggtcccatggataagtaacactcactacagggctgtggagaccgggggcgtgtttgattactacaccactggcgtagtgactatatggtaccagactaactttgtagtacctcctgacacccctaccagtgcttatatcttagcatttggggccggccaaaagaatttcaccctcaaactatgtaaagacacggatgaaatcacccaacaagcgacactgcagggcgatggt--------atagaagatgccataa---ccaacacagt--------------------------gaatgccacgatagacagggtgctgagtcgaccagtgtctcattca-----ccaacagctgctaacacccaggtgagccaacactccatagagaccgggcgtgtacctgcgctacaagctgctgagacgggggctacctccaatgcttctgatgaaaacttgatagagacaagatgtgtggtcaacaaaaatagtgtggaagaggctagtataaaccacttcttctcccgagcggctttggtcggtaaggtggagttaaatgacacaggtacaag----tgccacagggtttaccaactgggatatagatataatggggtatgctcaactgcgtaggaaactggagatgttcacttacatgcgcttcaatgctgagttcacgtttgtggctaccaccagagctgggcgagtaccgtccagagtgcttcagtatatgtatgttccacccggagcacccaaaccggacggtagggaagccttccaatggcaatcctcgactaacccgtcagtgttcagcaagatgacggatcctccaccacaggtctcagtcccattcatgtcgcctgctagtgcgtaccaatggttctatgacggataccccacctttggagagcacagtggtgaagatagtttgcgctacggccaatgccccaacaacgcattgggtaccttttcagtgagattcgttagtgaagagataactaacgagcggatcaccattaggatatacatgagactcaagcacgtgcgggcgtgggtcccgcgcccacttagatctgagccttatgtactgaagaactttccaaattacactacagt----aactcacgtcaccgcca---atcgtcccaccattac---aaacac------------------------------------------aggc------------------------------------------aagtttggtcagcagtcgggtgctatttacgtggggagttttagggtggtgaatcgtcatcttgctactcacaacgattgggcaaatcttgtttgggaagacagcaaccgagatctgcttgtatcgtccaccaccgcacaaggctgtgacacaattgcccgttgcaactgtcagacaggagtatactactgcaactcccgaaggaagcactaccccgttagtttttcaaagcccagtcttgtcttcgtggaggctagtgagtactaccctgctaggtaccaatcccacctcatgcttgcggtaggtcactccgaaccaggagactgcgggggcattctaaggtgccaacatggtgtcgttgggatcgtgtctactggaggcaacggattagttggcttcgcagatgtcagggacctcctgtggctagatgaagaagcaatggagcagggagtctctgattacattaaa-gggcttggtgacgcatttgggactggtttcaccgatgcggtttccagggaagtggaagctctcaagaaccatcttattggttctgagggagctgttgaaaagatccttaagaacttaatcaaattgatctctgctctggtaatcgtgattaggagtgattatgacatggtcactctcacagcaaccctagctttgattgggtgtcacggtagcccctgggcatggatcaaagcgaagacagcatctattctgggcatccctattgctcaaaagcagagcgcatcttggctcaaaaagtttaatgacatggccaacgctgctaagggattagaatggatttccaataagatcagcaaatttattgattggcttaaagagaaaattataccagcagccaaggagaaggttgaattcctgaacaatttgaaacaactaccg-ctattggagaatcagatctcaaacttagagcagtctgctgcctcacaggaagaccttgaagccatgttcgggaacgtgtcgtacctagccca---------tttctgccgcaagttccaaccactgtatgctactgaagccaagagagtctacgctctggagaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcattagaggctcaccaggcaccgggaagtccttagcaaccggcatcattgctcgagcgatagctgacaagtaccactccagcgtatactcgctcccaccagacccagatcactttgatgggtataaacagcaagtggttacagtcatggatgatctatgtcaaaatcctgatggcaaggatatgtcgctgttttgtcagatggtatctactgtggatttcattccaccaatggcttctttggaagagaaaggagtttctttcacgtccaagtttgtcattgcgtctactaacgccagtaacatcatagtaccaacagtgtccgattcagatgccattcgtcgcagattttacatggattgtgacattgacgtgacagactcgtacaaaacagatctgggtaggttagatgccggacgagctgctaaactgtgctctgagaacaacacagcaaactttaagcgttgtagcccactggtgtgtggaaaggctattcagttaaaagataggaggtctaaggtcagatatagtgtggactcagtggtttctgagctcattagggagtacaataatagatctgccattggcaatactattgaagccttgtttcagggcccacccaaattcagacccataaggatt---aaccttgaggagaagccagctcctgatgccatcagtgatctccttgccagcgtggatagtgaagaggtgcgtcagtactgt-agggaccaaggttggattgtaccagaaactcctacaaatgttgaacggcatctcaacagggctgtgttaatcatgcaatccatcgccacagtggtagcagtcgtctcattggtgtatgtcatctacaaactcttcgccggattccagggtgcttactctggtgctcccaagcaaacactcaagaagcccattctccgtacagcaacagtacagggcccaagccttgactttgccctatcactattgaggagaaacatcaggcaagttcagacagaccaagggcacttcaccatgctgggtgtcagagaccgcttggccgttctcccacggcattcacaacccggaaagactatctgggtagagcacaagcttgtgaacgttctggatgctgtcgaactagtggatgaacaaggggttaacttagaactaactctgatcaccctcgacaccaatgagaagtttagagacatcaccaaatttattccagagagtatcagtgctgccagtgatgccactttagtgatcaacacagagcacatgccctcaatgttcgtaccagtgggtgacgttgtacagtatggcttcttgaatctcagtgggaaacctacccaccgtaccatgatgtacaacttccctactaaagcaggacagtgtggaggtgtagtcacatcagttggaaaaatcattggcatccacatagggggtaacggcaggcaaggtttctgtgcaggactcaagagaagctactttgctagtgaacaaggagaaatccaatgggttaaacccaataaagagacaggaagatttaacatcaatgggccaactcgcactaagctcgaacccagtgtgtttcatgacgtctttgagggcaacaaggaaccagcagttttacatagcaaagaccctcgcctcgaggtggacttcgagcaggcattattctctaagtatgtgggaaacaccctacacgagcctgatgagtacatcatagaagcagcccttcactatgcaaatcaactgaagcagctagacatagacacctctcaaatgagcatggaggaggcctgttatggtacggataatcttgaagctattgacctccacaccagcgcaggctacccttatagcgcattgggaataaagaagagggatattttagatcctaccaccagagacgtgagcaagatgaagttctatatggacaagtatggtcttgatctcccctattccacctatatcaaagatgagcttcgctcgatggacaagatcaagaaagggaagtctcgcttgattgaagccagcagtttgaatgattcggtctatctcagaatggcttttggacacctctacgaagctttccatgcaaaccctggaactgtgactggttcggctgtggggtgcaacccagatgtcttttggagcaagctaccaatcctgctccctggttccctctttgcttttgactactcaggctatgatgctagccttagtccagcttggtttagagcactggagctagtcctcagggagataggttatggtgaggaggcaatctcactcatcgaaggaatcaatcacacccaccatgtgtaccgcaacaaaacctattgcgtgcttggtgggatgccctcaggctgttcgggaacgtccatctttaactcaatgattaataacattatcattagagcattgctcattaaaacatttaagggcattgacttggacgagctcaacatggttgcttacggggatgatgtgctcgctagctaccccttcccaattgactgtctagagctagcaaaaacaggcaaagagtatggcctaaccatgacccctgctgataagtccccttgctttaatgaagtcagttgggaaaatgcaaccttcctcaagagaggtttcctgcctgatgagcaattcccatttttgattcaccctaccatgccaatgagagagatccaagaatccatacgatggaccaaggatgcacgcaacacccaagaccatgtgcgatccttgtgcttattggcatggcacaacggtaaacaggaatatgaaaaatttgtgagcacaattagatctgtcccaataggaaaagcattggcaatccccaattatgaaaatttgagacgcaattggctcgagttgtttt-----agaggttacat-------------------------tcac---------------cttaaccc-caccagga----atctggt------c-g-----cgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX156360.1_Coxsackievirus_A2_isolate_BJ13-53/BJ/CHN/2013_complete_genome
------------------ttaaaa--cag-ctc-tggggttg-t-acccacccaca-gggcccac-t-gggcgttagcacactgattctacggaatctttgtgcgcct-g-ttttata-----tccct---t---ccct-a-----aaata-gtaacttagaagttg--------aacatttacac-----gaccaa-tagcgggcgtggcgcaccagccacgtcttgg-tcaagcactcctg-tttccccggactgagtatcaataggctgc-tcacgtggctgaaggagaaagtgttcgttatccggctaactacttcgggaaacc-cagtaacaccatgaaggttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggctgatgagtcactgcg-aaccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaatacagacatggtgcg-aagagtctactgagctagttggtattcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-gaggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatactggctgcttatggtgacaattgaa-------aggttgttaccatatagctattggattggccatccgg--tgactaacagagctttgatt-----tatcaa----ttcatt-gggttcgtgcccc-----tatcatc--------------tacagtttattca-actttggtgtacttattatatcttaatagtaagaa-------atgggggcgcaattttcaactcagcgctcaggttctcacgagacgagcaatatagctcgtg-atggatcaaccattaacttcacgaacatcaactactataaggactcttatgcggcctcagcagctaagcatgacttcacccaagatcctggcaagttcacacaacctgtgctggatgctttacgcgaagcagtgccaccgttacagtcaccgagtgctgaggcatgtggttacagtgacagagtggcgcagttgacagttggcaactcgactatcactactcaagaagctgccaatataatagtgtcctatgctgagtggccagagtattgtccagacacggacgccaccgcagtcgacaaaccaacccgcccagatgtgtcagtgaacagattctacaccatgccagcaaccttgtgggagacag------------------aatcgaagggatggtattggaagttccctgatttacttaatgagataggcgttttcggacagaacgcccagtttcactacttgtatagatcagggttttgtattcacgtacagtgtaatgccagtaagttccatcaaggggctttgcttgtagcggtaattcctgagtttgttgtggctgagcaggatgccacccagaagcccaata---cagcaaagcacccttcgttggaagccacacagcccggcaagaaaggtaaggcgtttagacacccttacgttcttgattgtggcgtgccattaagccaagcccttgtcttcccccaccagtggatcaacttgcgcaccaacaactgcgctaccatagtagtcccttatattaatgctttgccctttgattctgcaataaaccactccaatttctcactggcagtgataccggtttgcccattgaaatataacacaggtgctaccccctcaatacccatcacgattacagttgcacccttgtgttcggagtttgccgggttgcgccaagcagtcaagcaaggagtcccagtagagatgaaacctggaacaaaccaattcttaacaactgatgacgggacctcagcaccaatactacccggcttccaccccacaccaaccatacacatccccggtgaagtccatagtctgctagagttgtgtcagattgagactatgcttgaggtgaacaa----------c------acatctaaggcagtggag------ctcgaccggttgaggatacctgtgtctgcacagagcg------ccgtggacaccctgtgcgcggcttttagagtggaccccggtagggacggcccctggcagtccactatggtaggacaactatgcaggtactacacccagtggtcaggctccctgaagattacattcatgttcactggttcattcatggccactgggaagatgctggtcgcctacacaccaccaggaggcgcacaacctgccacacgggagctagctatgttgggcacacatgtaatctgggattttggcctgcaatcgtcggttacactagtggtcccatggataagcaacactcactatagggctgtggagactgggggtgtgtttgattactacaccactggcgtggtgaccatatggtaccagactaattttgtagtacctcctgacacccctaccagtgcttacatcctagcatttggggccggccaaaagaacttcactctcaagctatgcaaagacacggatgaaatcacccagcaagcgacactacagggcgatggt--------atagaagatgctataa---ccaacacagt--------------------------gaatgctacgatagacagggtgttgagtcggccagtgtctcattca-----ccaacagctgctaacacccaggtgagccagcactctattgagactgggcgtgtacctgcactacaagctgctgaaacgggtgctacctccaatgccactgatgaaaacttgatagaaacaagatgtgtggttaacaaaaacagtgtggaagaggctagtataaaccacttcttctcccgagcagctttggttggtaaggtggagttgaatgacacaggtacgag----tgccacagggtttaccaactgggatatagatataatgggatatgctcaactgcgtagaaaactggagatgttcacctacatgcgcttcaatgctgagttcacgtttgtggctaccaccagagctggacaagtaccatctagagtgctccagtatatgtatgttccgcccggagcacccaaaccggacggtagggaagcctttcaatggcaatcctcgactaacccgtcagtgttcagcaaaatgacggaccctccaccacaggtctcagtcccattcatgtcgcctgctagtgcgtaccaatggttttatgacggataccccacctttggagagcacagtggcgaagatagtttgcgctacggtcaatgccccaacaacgcattaggcaccttttcagtgagattcgttagtgaagagataactaacgagcgaatcaccatcaggatatatatgaggcttaaacacgtgcgggcttgggtcccgcgcccactcaggtctgagccttatgtattgaagaatttcccaaattacactgcagt----gactcacgtcaccgcta---accgtcccaccattac---aaacac------------------------------------------aggc------------------------------------------aagtttggtcagcaatcgggtgctatttacgtggggaattttagagtggtgaatcgtcatcttgccactcacaacgattgggcgaaccttgtttgggaagacagcacccgagacttgcttgtgtcgtccaccaccgcacaaggctgtgacacgattgcccgttgcaactgtcagacaggagtatactactgtaactctcgaaggaagcactacccagttagtttttcaaagcccagtcttgttttcgtggaggccagtgaatactaccctgctaggtaccaatcccatctcatgcttgcagtaggtcactccgaaccaggtgattgcggaggcattctaaggtgccaacatggtgttgttggaattgtgtctactgggggcaacggacttgttggctttgcagatgtcagagaccttctgtggctagatgaagaggcaatggagcagggggtctctgattacatcaaa-gggctcggtgacgcattcgggactggtttcaccgatgcagtttccagggaggtggaagctctcaagaattatcttattggatctgaaggagccgttgagaagatccttaagaacttaatcaaattgatctctgctctggtcatcgtgattaggagtgattatgacatggtcaccctcacagcaactctagctttgattgggtgtcacggtagcccctgggcatggatcaaagcaaagacagcatctattctgggcatccctatcgcccaaaaacagagcgcatcctggctaaaaaagtttaatgacatggccaacgctgctaagggattagaatgggtttccaataagatcagcaaatttatcgattggcttaaggagaaaattataccagcagccaaggagaaggttgaattcctgaacaatttgaaacaattgcca-ctattggagaatcagatctcaaacttggagcagtctgccgcctcacaggaggaccttgaagccatgttcgggaatgtgtcgtacctagccca---------tttctgtcgtaaataccaaccactgtatgctactgaagccaagagagtctacgccctggagaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggctcaccgggcaccgggaagtctttagcaaccggcattattgctcgagcaatagctgataagtaccactccagtgtctattcactcccgccagatccagatcactttgatgggtataaacagcaggtggttacagttatggatgacttatgtcagaaccctgacggtaaggacatgtccttgttctgccaaatggtatccactgtagatttcatccctccaatggcttcccttgaggagaaaggggtgtctttcacctctaaatttgtcatcgcatccactaacgccagcaacatcatagtaccaacagtgtcagattccgacgccatccgccgcagattttatatggattgcgacattgaggtgacggactcatataaaacagacctgggcagattggatgccggtcgggccgccaagctgtgttctgaaaataacactgccaacttcaaacgctgcagccctctggtgtgcgggaaagccattcagctcagagacaggaaatctaaggttaggtatagcgtggacacagtggtgtctgagcttattagggagtacaacaataggtctgccattggaaatacaattgaagccctgttccagggaccacccaagttcaggccaatcaggatc---agccttgaggagaaaccagctccagatgctattagtgaccttcttgccagcgtggatagcgaagaagtgcgtcagtactgt-agagaccaaggctggatcatcccagagactcccacaaatgttgagcgacacctcaatagagctgtactgattatgcaatccatcgctacagtagtagcagttgtctctttggtgtatgttatctacaagctctttgctgggttccagggtgcttactctggtgcccctaagcaggtgctcaagaaacccattctccgcacggcaacagtgcagggcccaagtctcgactttgctctatctctactgagaaggaatatcaggcgagtccaaacagaccaagggcactttaccatgctgggagtcagagatcgcttagctgtccttccgcgacactcacaacctggaaagacaatctggatagagcacaagcttgtgaatgttctggatgctgttgaactagtggacgagcagggggtcaatttggagctaaccctagttaccctagacaccaatgagaagttcagagatattactaaattcatcccagaaagtatcagcgccgctagtgacgccactttagtgatcaacacagagcatatgccttcaatgtttgtgccagtaggtgacgtcgtgcagtatggcttcctaaatctcagtggaaaaccaactcaccgtactatgatgtacaactttcccactaaggcaggtcaatgtggaggggtggtcacgtcagttgggaaggtcattggcattcacatagggggtaatggcaggcaaggtttctgtgcggggcttaagagaagctattttgctagtgaacaaggagagatccaatgggtcaaacctaacaaagaaacagggaggctaaatatcaatgggccaacccgcaccaaactcgagcccagcgtgttccatgacgtctttaagggcaacaaagagccagcagtcttacacagtaaagacccccgcctagaggtggactttgagcaggcactgttctctaagtatgtgggaaacacactgcatgaacctgatgagtacgtcagagaggcagcccttcactatgcgaaccagttgaagcaactagacatagacaccacccagatgagcatggaagaagcgtgctatggcacagacaacctcgaggccattgacctccacactagcgctggttacccctacagtgccctgggaataaaaaagagagatattctagaccctaccactagagacgtgagcaagatgaagttttacatggataagtatggccttgacctcccttactccacctatgtcaaagacgagcttcgctcgatagataagatcaagagggggaaatctcgactgattgaagccagcagcttgaacgactcagtctacctcagaatggcctttgggcacctctatgaaactttccatgcaaaccctgggactgtgactggttcagctgtggggtgcaacccagatgtattttggagcaaactaccaatcttgctccctggctccctctttgcctttgactactcaggttatgatgctagcctcagcccagtttggttcagggcactggagctagtcctcagggagataggctatagtgagggggcggtttcgcttattgaaggaatcaaccacacacaccatgtgtaccgcaacaagacttattgtgtgcttggcgggatgccctcgggttgttcaggaacatctatctttaactcaatgatcaataacattatcatcagaacactccttattaagacattcaagggtattgacttggatgaactcaatatggttgcctacggggacgatgtgctcgccagttaccctttcccaattgactgtctagaactggcaagaacaggtaaggaatatggtctaaccatgacccctgctgataagtccccttgcttcaatgaagttaattgggaaaatgcaacctttctcaaaaggggcttcaagcccgatgatcaatttccattcttgatccaccctaccatgccaatgaaggagatccatgaatccattcgatggaccaaggatgcacgcaatactcaagatcacgtgcgatccttatgccagttggcatggcacaacggcaagcaagaatatgaagaatttgtgagcacaattagatctgtcccaataggaaaagcattggcaattcccaattatgagaatctgagacgcaattggctcgaattatttt-----agaggttaaac-------------------------gcac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX867330.1_Coxsackievirus_A2_strain_430895_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgttagcacactgattctacggaatctttgtgcgcct-g-ttttata-----tccct---c---ccct-a-----aaata-gtaacttagaagttg--------aacatttacac-----gaccaa-tagtgggcgtggcgcaccagccacgtcttgg-tcaagcactcctg-tttccccggactgagtatcaataggctgc-tcacgtggctgaaggagaaagtgttcgttatccggctaactacttcgggaaacc-cagtaacaccatgaaagttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggctgatgagtcactgcg-aaccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggtaa-cccataggacgctctaatacagacatggtgcg-aagagtctactgagctagttggtattcctccggcccctgaatgcggctaatcctaactgcggagcacataccctcaatcca-gaggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---actcttatactggctgcttatggtgacaattgaa-------aggttgttaccatatagctattggattggccatccgg--tgactaacagagctttgatt-----tatcaa----ttcatt-gggtttgtgccct-----tatcatc--------------tacagtttattca-accttggtgtacttgttatatcttaatagtaagaa-------atgggggcgcaactttcaactcagcgctcaggttctcacgagacgagcaatatagctcgtg-atggatcaaccattaacttcacgaacattaactactataaggactcctatgcggcctcagcagctaagcatgacttcacccaagatcctggcaagttcacacaacctgtgctggatgctttacgcgaagcagtgccaccgttacagtcaccgagtgctgaggcatgtggttacagtgacagagtggcgcagttgacagttggcaactcgactatcactactcaagaagctgccaatataatagtgtcttatgctgagtggccagagtattgtccagacacggacgctactgcggtcgacaaaccaacccgcccagatgtgtcagtgaacagattctacaccatgccagcaaccttgtgggagacag------------------aatcgaaaggatggtattggaagttccctgatttactcaatgagataggcgttttcggacagaacgcccagtttcactacttatatagatcagggttttgcattcacgtgcagtgtaatgccagtaagttccatcaaggggctttgcttgtagcggtaattcctgagtttgttgtggctgagcaggatgccacccagaagcccaata---cagcaaagcacccttcgttggaagccacacagcccggcaagaaaggtaaggcgttcagacatccttacgttcttgattgtggcgtgccattaagccaagcccttgtcttcccccaccagtggatcaacttgcgcaccaacaactgcgccaccatagtggtcccatatattaatgctttgccttttgattctgcaataaaccattccaatttctcactggcagtgataccggtttgcccattgaaatataacacaggtgctaccccctcaatacccatcacgattacagttgcacccttgtgctcggagtttgccgggttgcgccaagcagtcaagcaaggagtcccagtagagatgaaacctggaacaaaccaatttttaacaactgatgacgggacctcagcaccaatactacccggcttccaccccacaccaaccatacacatccccggtgaagtccatagtctgctagagttgtgtcagattgagactatgcttgaggtaaacaa----------t------acatctaaggcagtagag------ctcgaccggttgaggatacctgtgtctgcacagagcg------ccgtggataccctgtgcgcggcttttagagtggaccccggtagggacggcccctggcagtctactatggtaggacaactatgcaggtactacacccagtggtcaggctccctgaagattacattcatgttcactggttcattcatggccactgggaagatgctggtcgcctacacaccaccaggaggcgcacaacctgccacacgggagctagctatgttgggcacacatgtaatctgggattttggcctgcaatcgtcggttacactagtggtcccatggataagcaacactcactatagggctgtggagactgggggtgtgtttgattactacaccactggcgtggtgaccatatggtaccagactaattttgtggtacctcctgacacccctaccagtgcttacatcctagcatttggggccggccaaaagaacttcactctcaagctatgcaaagacacggatgaaatcacccagcaagcgacactgcagggcgatggt--------atagaagatgctataa---ccaacacagt--------------------------gaatgctacgatagacagggtgttgagtcggccagtgtctcattca-----tcaacagctgctaacacccaggtgagccagcactccattgagactgggcgtgtacctgcactacaagctgctgaaacgggtgctacctctaatgccactgatgaaaacctgatagaaacaagatgtgtggttaacaaaaatagtgtggaagaggctagtataaaccacttcttctcccgagcagctttggttggtaaggtggagttgaatgacacaggtacgag----tgccacagggtttaccaactgggatatagatataatggggtatgctcaactgcgtagaaaactggagatgttcacctacatgcgcttcaatgctgagttcacgtttgtggctaccaccagagctggacaagtgccatctagagtgctccagtatatgtatgttccacccggagcacccaaaccggacggtagggacgcctttcaatggcaatcctcgaccaacccgtcagtgttcagcaaaatgacggaccctccaccacaggtctcagtcccattcatgtcgcctgctagtgcgtaccaatggttctatgacggataccccacctttggagagcacagtggcgaagatagtctgcgctacggtcaatgccccaacaacgcattgggcaccttttcagtgagattcgttagtgaagagataactaacgagcgaatcaccatcaggatatatatgaggcttaaacacgtgcgggcttgggtcccgcgcccactcaggtctgagccttatgtattgaagaatttcccaaattacactgcagt----gactcacgtcaccgcca---accgtcccaccattac---aaacac------------------------------------------aggc------------------------------------------aagttcggtcagcaatcgggtgctatttacgtggggaattttagagtggtgaatcgtcatcttgccactcacaacgattgggcgaaccttgtttgggaagacagcacccgagatttgcttgtgtcgtccaccaccgcacaaggctgtgacacgattgcccgttgcaactgtcagacaggagtatactactgtaactcccgaaggaagcactaccccgttagtttttcaaagcccagtcttgtcttcgtggaggccagtgaatactaccctgctaggtaccaatcccatctcatgcttgcagtgggtcactccgaaccaggtgattgcgggggcattctaaggtgccaacatggtgttgttggaattgtgtctactgggggcaacggacttgttggctttgcagatgtcagagaccttctgtggctagatgaagaagcaatggagcagggagtcactgattacatcaaa-gggctcggtgacgcatttgggactggtttcaccgatgcggtttccagggaagtggaagctctcaagaattatcttattggatctgaaggagccgttgaaaagatccttaagaacttaatcaaattgatctctgctctggtcatcgtgattaggagtgattatgacatggtcaccctcacagcaactctagctttgattgggtgtcacggtagcccctgggcatggatcaaagcaaagacagcatctattctgggcatccctatcgcccaaaaacagagcgcatcctggctcaaaaagtttaatgacatggccaacgctgctaagggattagaatgggtttccaataagatcagcaaatttatcgattggcttaaggagaaaattataccagcagccaaggagaaggttgaattcctgaacaatttgaaacaattgcca-ctactggagaatcagatctcaaacttggagcagtctgccgcctcacaggaagaccttgaagccatgttcgggaatgtgtcgtacctagccca---------tttctgtcgcaaataccaaccactgtatgctactgaagccaagagagtctacgccctggagaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggctcaccgggcaccgggaagtctttagcgaccggcattattgctcgagcaatagctgacaagtaccactccagtgtctattcactcccgccagatccagatcactttgatgggtataaacagcaggtggttacagttatggatgacttatgtcagaaccctgacggtaaggacatgtccttgttctgccaaatggtatccactgtggatttcatccctccaatggcttcccttgaggagaaaggggtgtctttcacctctaaatttgtcatcgcatccactaacgccagtaacatcatagtaccaacagtgtcagattccgacgccatccgccgcagattttatatggattgcgacattgaggtgacggactcatataaaacagacctgggcagattggatgccggtcgggccgccaagctgtgttctgaaaataacactgccaacttcaaacgctgcagccctctggtgtgcgggaaagccattcagctcagagacaggaaatctaaggttaggtatagcgtggacacagtggtgtctgagcttattagggagtacaacaataggtctgccattggaaatacaattgaagccctgttccagggaccacccaagttcagaccaatcaggatc---agccttgaggagaaaccagctccagatgctattagtgaccttcttgccagcgtggatagcgaagaggtacgtcagtactgc-agagaccaaggctggatcatcccagagactcccacaaatgttgaacgacacctcaatagagctgtgctgattgtgcaatccatcgctacagtggtagcagttgtctctttggtgtatgttatctacaagctctttgctgggttccagggtgcttactctggtgcccctaagcaggtgctcaagaaacctattctccgcacggcaacagtgcagggcccaagtctcgactttgctctatcactactgagaaggaatatcaggcaagtccaaacagaccaagggcactttaccatgctgggagtcagagatcgcttagctgtccttccgcgacactcacaacctggaaagacaatctggatagagcacaagcttgtgaacgttctggatgctgtcgagctagtggacgagcagggggtcaatttggagctaaccctagttaccctagacaccaatgagaagttcagagatattactaaattcatcccagaaagtatcagcgccgctagtgacgccactttagtgatcaacacagagcatatgccttcaatgtttgtgccagtgggtgacgtcgtgcagtatggcttcctaaatctcagtggaaaaccaactcaccgcactatgatgtacaactttcccactaaggcaggtcaatgtggaggggtggtcacatcagttgggaaggtcattggcattcacatagggggtaatggcaggcaaggtttctgtgcaggacttaagagaagctattttgctagtgaacaaggagagatccaatgggtcaaacctaataaagaaacagggaggctaaacatcaatgggccaacccgcaccaaactcgagcccagcgtgttccatgacgtctttaagggcaacaaagagccagcagtcttacacagtaaagaccctcgcctagagatggacttcgagcaggcgctgttctctaagtatgtgggaaacacactgcatgaacctgatgaatacgtcagagaggcagcccttcactatgcgaatcagttgaagcagctagacatagacaccacccagatgagcatggaagaagcgtgctatggcacagacaaccttgaggccattgacctccacactagcgcaggctacccctacagtgccctgggaataaaaaagagagatattctagaccctaccactagagacgtgagcaaaatgaagttttacatggataagtatggccttgacctcccttactccacctatgtcaaagacgagcttcgctcgatagataagatcaagaaggggaaatctcgactgattgaagccagcagcttaaacgactcagtctacctcagaatggcctttgggcacctctatgaaaccttccatgcaaaccctggaacagtgactggttcagctgtggggtgcaacccagatgtattttggagcaaactaccaatcttgcttcctggttccctctttgcctttgactactcaggttatgatgctagtctcagcccagtttggttcagggcactggagctagtcctcagggagataggctatagtgaggaggcggtttcgcttattgaaggaatcaaccacacacaccatgtgtaccgcaacaagacttattgtgtgcttggtgggatgccctcgggttgctcaggaacatccatctttaactcaatgattaataacattatcatcagaacactccttattaagacattcaagggtattgacttggatgaactcaatatggttgcctacggggacgatgtgctcgccagttaccctttcccaattgactgtctagaactagcaagaacaggtaaggaatatggtctaaccatgacccctgctgataagtccccttgcttcaatgaagttaattggggaaatgcaacctttctcaaaaggggcttcatgcccgacgatcaattcccattcttgatccaccctaccatgccaatgaaggagatccatgaatccattcgatggaccaaggatgcacgcaatactcaagatcacgtgcgatccttatgcctgttggcatggcacaacggcaagcaagaatatgaagaatttgtgagcacaattagatctgtcccagtaggaaaagcattggcaatccccaattatgagaatctgagacgcaattggctcgaattatttt-----agaggttagac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289359.1_Coxsackievirus_A2_isolate_CV-A2/P373/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg----gccacccggt-gggcccac-t-gggcgttagcacactgattctacggaacctttgtgcgcct-g-ttttata-----tccct---c---ccct-a-----aaata-gtaacttagaagttg--------aacatttacac-----gaccaa-tagtgggcgtggcgcaccagccacgtcttgg-tcaagcactcctg-tttccccggactgagtatcaataggctgc-tcacgtggctgaaggagaaagtgttcgttatccggctaactacttcgggaaacc-cagtaacaccatgaaagttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggctgatgagtcactgcg-aaccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaatacagacatggtgcg-aagagcctactgagctagttggtattcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-gaggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatactggctgcttatggtgacaattgaa-------aggttgttaccatatagctattggattggccatccgg--tgactaacagagctttgatt-----tatcaa----ttcatt-gggttcgtgcccc-----tatcacc--------------tacagtttattca-actttggtgtacttattatatcttaatagtaagaa-------atgggggcgcaattttcaactcagcgctcaggttctcacgagacgagcaatatagctcgtg-atggatcaaccattagtttcacgaacatcaactactataaggactcttatgcggcctcagcagctaagcatgacttcacccaagatcctggcaagttcacacaacctgtgctggatgctttacgcgaggcagtgccaccgttacagtcaccgagtgctgaggcatgtggttacagtgacagagtggcgcagttgacagttggcaactcgactatcactactcaagaagctgccaatataatagtgtcttatgctgagtggccagagtattgtccagacacagacgccactgcggtcgacaaaccaacccgcccagatgtgtcagtgaacagattctacaccatgccagcaaccttatgggagacag------------------aatcgaagggatggtattggaagttccccgatttactcaatgagataggcgttttcggacagaacgcccagtttcactacttgtatagatcagggttttgcattcacgtacagtgtaatgccagtaagttccatcaaggggctttgcttgtagcggtaattcctgaatttgttgtggctgagcaggatgctacccagaagcccaata---cagcaaagcacccttcgttggaagctacacagcccggcaagaaaggtaaggcgttcagacacccttacgttcttgattgtggcgtgccattaagccaagcccttgtcttcccccaccagtggatcaacttgcgcaccaacaactgcgctaccatagtagtcccttatattaatgctttgccttttgattctgcaataaaccattccaatttctcactggcagtgataccggtttgcccattgaaatataacacgggtgctaccccctcaatacccatcacgattacagttgcacccttgtgctcggagtttgccgggttgcgccaagcagtcaagcaaggagtcccagtagagatgaaacctggaacaaaccaattcttaacaactgatgacgggacctcagcaccaatactacccggcttccaccccacaccaaccatacacatccccggtgaagtccatagcctgctagagttgtgtcagattgagactatgcttgaggtgaacaa----------t------acatctaaggcaatggag------tttgaccggttgaggatacctgtgtctgcacagagcg------ccgtggacaccctgtgcgcagcttttagagtggaccccggtagggacggcccctggcagtccactatggtaggacaactatgcaggtactacacccagtggtcaggctccctgaagattacattcatgttcactggttcattcatggccactgggaagatgctggttgcctacacaccaccaggaggcgcacaacctgccacacgggagctagctatgttgggcacacatgtgatctgggattttggcctgcagtcgtcggttacactcgtggtcccatggataagcaacactcactatagggctgtggagactgggggtgtgtttgattactacaccactggcgtggtgaccatatggtaccagactaattttgtagtacctcctgacacccctaccagtgcttacatcctagcatttggggccggccaaaagaacttcactctcaagctatgtaaagatacggatgaaatcacccagcaagcgacactacagggcgatggt--------atagaagatgctataa---ccaacacagt--------------------------gaatgctacgatagacagggtgttgagtcggccagtgtctcattca-----ccaacagctgctaacacccaagtgagccagcactccattgagactgggcgtgtacctgcactacaagctgctgaaacgggtgctacctccaatgccactgatgaaagcctgatagaaacaagatgtgtggttaacaaaaatagtgtggaagaggctagtataatccacttcttctcccgagcagctttggttggtaaggtggagttgaatgacacaggtacgaa----tgccacagggttcaccaactgggatatagatataatggggtatgctcaactgcgtagaaaactggagatgttcacctacatgcgcttcaatgctgagttcacgtttgtggctaccaccagagctggacaagtaccatctagagtgctccagtatatgtatgttccacccggagcacccaaaccggacggtagggaagcctttcaatggcaatcctcgactaacccgtcagtgttcagcaaaatgacggaccctccaccacaggtctcagtcccattcatgtcgcctgctagtgcgtaccaatggttctatgacggataccccacctttggagagcacagtggcgaagatagtttgcgctacggtcaatgccccaacaacgcattaggcaccttttcagtgagattcgttagtgaagagataactaacgagcgaatcaccatcaggatatatatgaggcttaaacacgtgcgggcttgggtcccgcgcccactcaggtctgagccttatgtattgaagaatttcccaaattacactgcagt----gactcacgtcaccgcta---accgtcccaccattac---aaacac------------------------------------------aggc------------------------------------------aagtttggtcagcaatcgggtgctatttacgtggggaattttagagtggtgaatcgtcatcttgccactcacaacgattgggcgaaccttgtttgggaagacagcacccgagacttgcttgtgtcgtccaccaccgcacaaggctgtgacacgattgcccgttgcaactgtcagacaggagtgtactactgtaactcccgaaggaagcactacccagttaatttttcaaagcccagccttgtcttcgtggaggccagtgaatactaccctgctaggtaccaatcccatctcatgcttgcagtaggtcactccgaaccaggtgattgcgggggcattctaaggtgccaacatggtgttgttggaattgtgtctactgggggcaacggacttgttggctttgcagatgtcagagaccttctgtggctagatgaagaagcaatggagcagggggtctctgattacatcaaa-gggctcggtgacgcatttggaactggtttcactgatgcagtttccagggaagtggaagctctcaagaattatcttattggatctgaaggagccgttgaaaagatccttaagaacttaatcaaattgatctctgctctggtcatcgtgattaggagtgattatgacatggtcaccctcacagcaactctagctttgattgggtgtcacggtagcccctgggcatggatcaaagcgaagacagcatctattctgggcatccctatcgcccaaaaacagagcgcatcctggctcaaaaagtttaatgacatggccaacgctgctaagggattagaatgggtctccaataagatcagcaaatttatcgattggcttaaggagaaaattataccagctgccaaggagaaggttgaattcctgaacaacttgaaacaattgcca-ctactcgagaatcagatctcaaacttagagcagtctgccgcctctcaggaagaccttgaagccatgttcgggaatgtgtcgtacctagccca---------tttctgtcgcaaataccaaccactgtatgctactgaagccaagagagtctatgccctggagaagaggatgatcaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggctcaccgggcagtgggaagtctctagcacccggcattattgctcgagcaatagctgacaagtaccactccagtgtgtactcactcacgccagatacagatcactttgatgggtataaacagcaggtggttacagttatggatgccttatgtcagaaccctgacggtaaggacatgtccttgttctgccagatggtatccaccgtagatttcatcccttcaatggcttcccttgaggagaaaggggtgtctttcacctctaaatttgtcatcgcatccactaacgccagcaacatcatagtaccaacagtgtcagattccgacgccatccgccgcagattttatatggattgcgacattgaggtgacagactcatataaaacagacctgggcagattggatgccggtcgggccgccaagctgtgttctgaaaataacactgccaacttcaaacgctgcagccctctggtgtgcgggaaagccattcagctcagagacaggaaatctaaggttaggtatagcgtggacacagtggtgtctgagcttattagggagtacaacaataggtctgccattggaaatacaattgaagccctgttccagggaccacccaagttcagaccaatcaggatc---agccttgaggagaaaccagctccagatgctattagtgatcttcttgccagcgtggatagcgaagaggtacgtcagtcctgt-agagaccaaggctggatcatcccagagactcccacaaatgttgaacgacacctcaatagagctgtgctgattatgcaatccattgctacagtggtagcagttgtctctttggtgtatgttatctacaagctctttgctgggttccagggtgcttactctggtgcccctaagcaggtgctcaagaaacccattctccgcacggcaacagtgcagggcccaagtctcgactttgctctttcactactgagaaggaatatcaggcaagtccaaacagaccaagggcactttaccatgctgggagtcagagatcgcttagctgtccttccgcgacactcacaacctggaaagacaatctggatagagcacaagcttgtgaacgttctggatgctgtcgaactagtggacgagcagggggtcaatttggagctaaccctagttaccctagacaccaatgagaagttcagagatattactaaattcatcccagaaagtatcagcgccgctagtgacgccactttagtgatcaacacagagcacatgccttcaatgtttgtgccagtaggtgacgtcgtgcagtatggcttcctaaatctcagtggaaaaccaactcaccgtactatgatgtacaactttcccactaaggcaggtcaatgtggaggggtggtcacgtcagttgggaaggtcattggcatccacatagggggcaatggcaggcaaggtttctgtgcgggacttaagagaagctattttgctagtgaacaaggagagatccaatgggtcaaacctaacaaagaaacagggaggctaaacatcaatggaccaacccgcactaaactcgagcccagcgtgttccatgacgtctttaagggcaacaaagagccagcagtcttacacagtaaagacccccgcctagaggtggactttgagcaggcactgttctctaagtatgtgggaaacacactgcatgaacctgatgaatacgtcagagaggcagcccttcactatgcgaatcagttgaagcagctagacatagacaccacccagatgagcatggaagaagcgtgctatggcacagacaaccttgaggccattgacctccacactagcgctgggtacccttacagtgccctgggaataaaaaagagagatattctagaccctatcactagagacgtgagcaagatgaagttttacatggataagtatggccttgacctcccttactccacctatgtcaaagacgaacttcgctcgatagataagatcaagaaggggaaatctcgactgattgaagccagcagcttgaacgactcagtctacctcagaatggcctttgggcacctctatgaaaccttccatgcaaaccctgggactgtgactggttcagctgtggggtgcaacccagatgtgttttggagcaaactaccaatcttgcttcctggctccctctttgcctttgactactcaggttatgatgctagtctcagcccagtttggttcagggcactggagctagtcctcagggaaataggctatagtgaggaggcggttacgcttattgaaggaatcaaccacacacaccatgtgtaccgcaacaagacttattgtgtgcttggcgggatgccctcgggttgttcaggaacatctatctttaatacaatgattaataacattatcatcagaacgctccttattaagacattcaagggtattgacttggatgaactcaatatggttgcctacggggacgacgtgctcgccagttaccctttcccaattgactgtctagaactagcaagaacaggtaaggaatatggtctaaccatgacccctgctgataaatccccttgcttcaatgaagttaattgggaaaatgcaacctttctcaaaaggggcttcatgcccgatgatcaatttccattcttgatccaccctaccatgccaatgaaggagatccatgaatccattcgatggaccaaggatgcacgcaatactcaagatcacgtgcgatccttatgcctgttggcatggcacaacggcaagcaagaatatgaagaatttgtgagcacaattagatctgtcccagtaggaaaagcattggcaattcccaattatgagaatctgagacgcaattggctcgaattatttt-----agaggttagac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289360.1_Coxsackievirus_A2_isolate_CV-A2/P478/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg----gccatccggt-gggcccac-t-gggcgttagcacactgattctacggaacctttgtgcgcct-g-ttttata-----tccct---c---ccct-a-----aaata-gtaacttagaagttg--------aacatttacat-----gaccaa-tagtaggcgtggcgcaccagccacgtcttgg-tcaagcactcctg-tttccccggactgagtatcaataggctgc-tcacgcggctgaaggagaaagtgttcgttatccggctaactacttcgggaaacc-cagtaacaccatgaaagttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggctgatgagtcactgcg-aaccccacgagcgatcgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaatacagacatggtgcg-aagagtctactgagctagttggtattcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-gaggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcatactggctgcttatggtgacaattgaa-------aggttgttaccatatagctattggattggccatccgg--tgactaacagagctttgatt-----tatcaa----ttcatt-gggtttgtgccct-----tatcacc--------------tacagtttattca-actttggtgtacttgttacatcttaatagtaagaa-------atgggggcgcaattttcaactcagcgctcaggttctcacgaaacgagcaatatagctcgtg-atggatcaaccattaacttcacgaacatcaactactataaggattcctatgctgcctcagcagctaagcatgacttcacccaagatcctggcaagttcacacaacctgtgctggatgctttacgcgaagcagtcccaccgttacagtcaccgagtgctgaggcatgtggttacagtgacagagtggcgcagttgacagttggcaactcgactatcactactcaagaagctgccaatataatagtgtcttatgctgagtggccagagtattgtccagacacggacgctactgcggtcgacaaaccaacccgcccagatgtgtcagtgaacagattttacaccatgccagcaaccttgtgggaaacag------------------agtcgaaaggatggtattggaagttccctgatttactcaatgagataggcgttttcggacagaacgcccagtttcactacttatatagatcagggttttgcattcacgtgcagtgtaatgccagtaagttccatcaaggggccttgcttgtagcggtaattcctgagtttgttgtggctgagcaggatgctacccagaagcccaata---cagcaaagcacccttcgttggaagccacacagcccggcaagaaaggtaaggcgtttagacatccttacgttcttgattgtggcgtgccattaagccaagcccttgtcttcccccaccagtggatcaacttgcgcaccaacaactgcgctaccatagtagttccatatattaatgctttgccttttgattctgcaataaaccactccaatttctcactggcagtgataccggtttgcccattgaaatataacacaggtgctaccccctcaatacccatcacgattacagttgcaccattgtgctcggagtttgccgggttgcgtcaagcagtcaagcaaggaatcccagtagagatgaaacctggaacaaaccaatttttaacaactgatgacgggacctcagcaccaatactacccggtttccaccccacaccaaccatacacatccccggtgaagtccacagtctgctagagttgtgtcagattgaaactatgcttgaggtgaacaa----------t------acatctaaagcagtggag------ctcgaccggttgaggatacctgtgtctgcacagagcg------ccgtggacaccctgtgtgcggcttttagagtggaccccggtagggacggcccctggcagtctactatggtaggacaactatgcaggtactacacccagtggtcaggctccctgaagattacattcatgttcactggttcattcatggctactgggaagatgctggtcgcctacacaccaccaggaggcgcacaacctgccacacgggagctagctatgttgggcacacatgtaatctgggattttggcctgcaatcgtcggttacactagtggtcccatggataagcaacactcactacagggctgtggagactgggggtgtgtttgattactacaccactggcgtggtgaccatatggtaccagactaattttgtagtacctcccgacacccctaccagtgcttacatcctagcatttggggccggccaaaagaacttcactctcaagctatgcaaagacacggatgaaatcacccagcaagcaacactgcaaggcgatggt--------atagaagatgctataa---ccaacacagt--------------------------gaacgctacgatagacagggtgttgagtcggccagtgtctcattca-----ccaacagctgctaacacccaggtgagccagcactccattgagactgggcgtgtacctgcactacaagctgctgaaacgggcgctacctccaatgccactgatgaaaacctgatagaaacaagatgtgtggttaacaaaaatagtgtggaggaggctagtataaaccacttcttctcccgagcagctttggttggtaaggtggagttgaatgacacaggtacgag----tgccacagggtttaccaactgggatatagatataatggggtatgctcaactgcgtagaaaactagagatgttcacctacatgcgcttcaatgctgagtttacgtttgtggctaccaccagagctggacaagtgccatctagagtgctccagtatatgtatgttccacccggagcacccaaaccggacggtagggaagcctttcaatggcaatcctcaaccaacccatcagtgttcagcaaaatgacggaccctccaccacaggtctcagttccattcatgtcgcctgctagtgcgtaccaatggttctatgacggataccccacctttggagagcacagtggcgaagatagtctgcgctacggtcaatgccccaacaacgcattgggcaccttttcagtgagattcgttagtgaagagataactaatgagcgaatcaccatcaggatatatatgaggcttaaacacgtgcgggcttgggtcccgcgcccactcaggtctgagccttatgtattgaagaatttcccaaattacactgcaat----aactcacgtcaccgcta---accgttctaccatcac---aaacac------------------------------------------aggc------------------------------------------aagtttggtcagcaatcgggtgctatttacgtggggaattttagagtggtgaatcgtcatcttgccactcacaacgattgggcgaaccttgtttgggaagacagcacccgagatttgcttgtgtcgtccaccaccgcacaaggctgtgacacgatcgcccgttgcaactgtcagacaggagtatactactgtaactcccgaaggaagcactaccccgttagtttttcaaagcccagtcttgtcttcgtggaggccagtgaatactaccctgctaggtatcaatcccatctcatgcttgcagtaggtcactccgaaccaggtgattgcgggggcattctaaggtgccaacatggtgttgttggaattgtgtctactggaggcaacggacttgttggctttgcagatgtcagagaccttctgtggctagatgaagaggcaatggagcagggagtcactgattacatcaaa-gggctcggcgacgcatttgggactggtttcaccgatgcggtttccagggaagtggaagctctcaagaattatcttattggatctgaaggagctgttgaaaagatccttaagaacttaatcaaattgatctccgctctggtcatcgtgattaggagtgattatgacatggtcaccctcacagcaactctagctttgattgggtgtcacggtagcccctgggcatggatcaaagcaaagacagcatctattctgggcatccctatcgcccaaaaacagagcgcatcctggctcaaaaagtttaatgacatggccaacgctgctaagggattagaatgggtttccaataagatcagcaaatttatcgattggcttaaggagaaaattataccagcagccaaggagaaggttgaattcctgaacaatttgaaacaattgcca-ctactggagaatcagatctcaaacttggagcagtctgccgcctcacaggaagaccttgaagccatgttcgggaatgtgtcgtacctagccca---------tttctgtcgcaaataccaaccactgtatgctactgaagccaagagagtctacgccctggagaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggctcaccgggcaccgggaagtctttagcaaccggcattattgctcgagcaatagctgacaagtaccactccagtgtctactcactcccgccagatccagatcactttgatgggtataaacagcaggtggttacagttatggatgacttatgccagaaccctgacggtaaggacatgtccttgttctgccaaatggtatccaccgtagatttcatccctccaatggcttcccttgaggagaaaggggtgtctttcacctctaaatttgtcatcgcatccactaacgccagcaacatcatagtaccaacagtgtcagattccgacgccatccgccgcagattttatatggattgcgacattgaggtgacggactcatataaaacagacctgggcagattggatgccggtcgggccgccaagctgtgttctgaaaataacactgccaacttcaaacgctgcagccctctggtgtgcgggaaagccattcagctcagagacaggaaatctaaggttaggtatagcgtggatacagtggtgtctgagcttattagggagtacaacaataggtctgccattggaaatacaattgaagccctgttccagggaccacccaagttcagaccaatcaggatc---atccttgaggagaaaccagctccggatgctattagtgccgttgtagccagcgtgtatagggaagaggtacgtcagagctgc-agagagcaaggctggatcatcccagagactcccacaaatgttgaacgacacctcaatagagctgtgctgattatgcaatccatcgctacagtggtagcagttgtctctttggtgtatgttatctacaagctctttgctgggttccagggtgcttactctggtgcccctaagcaggtgctcaagaaacctattctccgtacggcaacagtgcagggcccaagtctcgattttgctctatcactactgagaaggaatatcaggcaagtccaaacagaccaagggcactttaccatgctgggagtcagagatcgcttagctgtccttccgcgacactcacaacctggaaagacaatctggatagagcacaaacttgtgaacgttctggatgctgtcgaactagtggacgagcagggggtcaatttggagctaaccctagttaccctagacaccaatgagaagttcagagatattactaaattcatcccagaaagtatcagcgccgctagtgacgccactctagtgatcaacacagagcatatgctttcaatgtttgtgccagtaggtgacgtcgtgcagtatggcttcctaaatctcagtggaaaaccaactcaccgcactatgatgtacaactttcccactaaggcaggtcaatgtggaggggtggtcacatcagttggaaaggtcattggcattcacatagggggtaatggcaggcaaggtttctgtgcgggacttaagagaagctattttgctagtgaacaaggagagatccaatgggtcaaacctaataaagaaacagggaggttaaacatcaatgggccaacccgcaccaaactcgagcccagcgtgttccatgacgtctttaagggcaacaaagagccagcagtcctacacaataaagacccccgcctagaggtggacttcgagcaggcactgttctctaagtatgtgggaaacacactgcatgaacctgatgaatacgtcagagaggcagcccttcactatgcaaatcagttgaagcagctagacatagacaccacccagatgagcatggaagaagcgtgctatggtacagacaaccttgaggccattgacctccacactagcgcaggttacccctacagcgccctgggaataaaaaagagagatattctagaccctaccactagagacgtgagcaagatgaagttttacatggataagtatggccttgacctcccttactccacctatgtcaaagacgagctccgctcgatagataagatcaagaaggggaaatctcgactgattgaagccagcagcttgaacgactcagtctacctcagaatggtctttgggcacctctatgaaacctttcatgcaaaccctggaactgtgactggttcagctgtggggtgcaacccagatgtattttggagcaaactaccaatcttgcttcctggttccctctttgcctttgactactcaggttatgatgctagtctcagcccagtttggttcagggcactggaactagtcctcagggagataggttatagtgaggaggcggtttcgcttattgaaggaatcaaccacacacaccatgtgtaccgcaacaagacttattgtgtgcttggtgggatgccctcgggttgctcaggaacatccatctttaattcaatgattaataacattatcatcagaacactccttattaagacattcaagggtattgacttggatgaactcaatatggttgcctacggggacgatgtgcttgccagttaccctttcccaattgattgtctagaattagcaagaactggtaaggaatatggtttaaccatgacccctgctgataagtccccttgcttcaatgaagttaattgggaaaacgcaacctttctcaaaaggggcttcatgcccgacgaccaattcccattcttgatccatcctaccatgccaatgaaggagatccatgaatccattcgatggaccaaggatgcacgcaatactcaagatcacgtgcgatccttatgcctgttggcatggcacaacggcaagcaagaatatgaagaatttgtgagcacaattagatctgtcccagtaggaaaagcattggcaattcccaattatgagaatctgagacgcatttggctcgaattatttt-----agaggttaaac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289358.1_Coxsackievirus_A2_isolate_CV-A2/P153/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg----gccatccggt-gggcccac-t-gggcgttagcacactgattctacggaatctttgtgcgcct-g-ttttata-----tccct---c---ccct-a-----aaata-gtaacttagaagttg--------aacatttacac-----gaccaa-tagtgggcgtggcgcaccagccacgtcttgg-tcaagcactcctg-tttccccggactgagtatcaataggctac-tcacgtggctgaaggagaaagtgttcgttatccggctaactacttcgggaaacc-cagtaacaccatgaaagttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggctgatgagtcactgcg-aaccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaatacagacatggtgcg-aagagtctactgagctagttagtattcctccggcccctgaatgcggctaatcctaactgcggagcacatgccctcaatcca-gaggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatactggctgcttatggtgacaattgaa-------aggttgttaccatatagctattggattggccatccgg--tgactaatagagccttggtt-----tatcaa----ttcatt-gggttcgtgccct-----tatcatc--------------tacagtttattca-actttggtgtacttgttatatcttaatagtaagaa-------atgggggcgcagttttcaactcagcgctcaggttctcacgagacgagcaatatagcccgtg-atggatcgaccattaacttcacgaacatcaactattataaggactcttatgcggcctcagcagctaagcatgacttcacccaagatcctggcaagttcacacaacctgtgctggatgctctacgcgaagcagtgccaccgttacagtcaccgagtgctgaggcatgtggttacagtgacagagtggcgcagttgacagttggcaactcgactatcaccactcaagaagctgccaatataatagtgtcttatgctgagtggccagaatattgtccagacacggacgccactgcggtcgacaaaccaacccgcccagatgtgtcagtgaacagattctacaccatgccagcaaccttgtgggagacag------------------aatcgaaaggatggtattggaagtttcctgatttactcaatgagataggcgttttcggacagaacgcccagttccactacttatatagatcagggttttgcattcacgtgcagtgtaatgccagtaagttccatcaaggggctttgcttgtagcggtaattcctgagtttgttgtggctgagcaggatgccacccagaagcccaata---cagcaaagcacccttcattggaagccacacaacccggcaagaagggtaaggcgttcagacacccttacgttcttgattgtggcgtgccgttaagccaagccctcgtcttcccccaccagtggatcaacctacgcaccaacaactgcgctaccatagtagtcccatatattaatgccttaccttttgattcagcaataaatcattccaatttctcactggcagtgataccggtttgcccattgaaatataacacaggtgctaccccctcaatacccatcacgattacagttgcacccttgtgctcggagtttgccgggctgcgccaagcagtcaagcaaggagtcccagtagagatgaaacctggaacaaaccaattcttaacaactgatgatgggacctcagcaccaatactacccggcttccaccccacaccaaccatacatatccccggtgaagtccatagtctgctagagttgtgtcagattgagactatgcttgaggtgaacaa----------t------acatctaaggcagtggag------ctcgatcggttaaggatacctgtgtctgcacagagcg------ccgtggacaccctgtgcgcggcttttagagtggaccccggtagggacggtccctggcaatccactatggtaggacaactatgcaggtactacacccagtggtcaggctccctgaagattacattcatgttcactggttcatttatggccactgggaagatgctggtcgcctacacaccgccaggaggcgcacaacctgctacacgggaactagctatgttgggcacacatgtaatctgggattttggcctgcaatcgtcggttacactagtggtcccatggataagcaacactcactatagggctgtggagactgggggtgtgtttgattactacaccactggcatggtgaccatatggtaccagactaattttgtagtgcctcctgacacccctaccagcgcttacatcctagcatttggggccggccaaaagaacttcactctcaagctgtgcaaagacacggatgaaatcacccaacaagcaacactgcagggcgatggt--------atagaagatgctataa---ccaacacagt--------------------------gaatgctacgatagacagggtgttgagtcggccagtgtctcattca-----ccaacagctgccaacacccaagtgagccagcactccattgagactgggcgtgtgcctgcactacaagctgccgaaacgggtgctacttccaatgctactgatgaaaacctgatagaaacaagatgtgtggttaacaaaaatagtgtggaagaggctagtataaaccacttcttctcccgagcagctttggttggtaaggtggagttaaatgacacaggtacgag----tgccacagggtttaccaactgggatatagatataatggggtatgctcaactgcgtagaaaactggagatgttcacctacatgcgcttcaatgctgagttcacgtttgtggctaccaccagagctggacaggtgccatctagagtgctccagtatatgtatgttccacccggagcacccaaaccggacggtagggaagcctttcaatggcaatcgtcgactaacccgtcagtgttcagcaaaatgacggaccctccaccacaggtctcagtcccattcatgtcgcctgctagtgcgtaccaatggttttatgacggataccccacctttggagagcacagtggtgaagatagtctgcgctacggtcaatgccccaacaacgcattgggcaccttttcagtgagattcgttagtgaagagataactaacgagcgaatcaccatcaggatatatatgaggcttaaacacgtgcgggcttgggtcccgcgcccactcaggtctgagccttatgtattgaaaaatttcccaaattacactgcagt----gactcacgtcaccgcta---accgtcccaccattac---aaacac------------------------------------------aggc------------------------------------------aaatttggtcagcaatcgggtgccatttacgtggggaattttagagtggtgaatcgtcatcttgccactcacaacgattgggcgaaccttgtttgggaagacagcacccgagacctgcttgtgtcgtccaccaccgcacaaggctgtgacacgatcgcccgttgcaactgtcagacaggagtatactactgtaactcccgaaggaagcactaccccgttagtttttcaaagcccagtcttgtcttcgtggaagccagtgaatactaccctgctaggtaccaatcccatctcatgcttgcagtaggtcactccgaaccaggtgattgcgggggcattctaaggtgccaacatggtgttgttggaatcgtgtccactgggggcaacggacttgttggctttgcagatgtcagagaccttctgtggctagatgaagaagcaatggagcagggagtctctgattacatcaaa-gggctcggtgacgcatttgggactggtttcaccgatgcggtctccagggaagtggaagctctcaagtattatctcattggatctgaaggagccgttgaaaagatcctcaagaacttaatcaaattgatctctgctctggtcatcgtgattaggagtgattatgacatggtcaccctcacagcaactctggctttgattgggtgtcacggtagcccctgggcatggatcaaagcaaagacagcatctattctgggcatccctatcgctcaaaaacagagtgcatcctggctcaagaaattcaatgacatggccaacgctgctaagggattggaatgggtttccaataagatcagcaaatttatcgattggcttaaggagaaaattataccagcagccaaggagaaggttgaattcttgaataatttgaaacaattgcca-ttactggagaatcagatctcgaacttggagcagtctgccgcctcacaggaagaccttgaagccatgttcgggaatgtgtcgtacctagccca---------tttctgtcgcaaatatcaaccactgtatgctactgaagccaagagagtctacaccctggagaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcattagaggctcaccgggtaccgggaagtctttagcaactggcattattgctcgagcaatagctgacaagtaccactccagtgtctattcactcccgccagatccagatcactttgatgggtataaacagcaggtggttacagttatggatgacttatgccagaaccctgacggaaaagatatgtccttgttctgccaaatggtatccactgtagatttcatccctccaatggcttcccttgaggagaaaggggtgtctttcacctctaaatttgtcatcgcatccactaacgccagcaacatcatagtaccaacagtgtcagattccgacgctatccgccgcagattttatatggattgcgacattgaggtgacggactcatataaaacagacctgggcagattggatgccggtcgggccgccaagctgtgttctgaaaataacactgccaactttaaacgctgcagtcctctggtgtgcgggaaagccattcagctcagagacaggaaatctaaggttaggtatagcgtggacacagtagtgtctgagcttattagggagtacaacaataggtctgccattggaaatacaattgaagccctgttccagggaccactcaagtttagaccaatcaggatc---agccttgaggagaaaccagctccagatgctattagtgaccttcttgccagcgtggatagcgaagaggtacgtcagtactgc-agagaccaaggctggatcatctcagaggctcccacaaatgttgaacgacatctcaatagagctgtgctgattgtgcaatccatcgctacagtagtagcagttgtctctttggtgtatgttatctacaagctctttgctgggttccagggtgcttactctggtgcccctaagcaagtgctcaagaagcctattctccgcacggcaacagtacagggtccgagtctcgactttgctctatcactactgagaaggaatatcaggcaagtccaaacagaccaagggcactttaccatgctgggagtcagagatcgcttagctgtccttccgcgacactcacaacctggaaagacaatctggatagagcacaaacttgtaaacgttctggatgctgtcgaactagtggacgagcagggggtcaatttggagctaaccctagttaccctagacaccaacgagaagttcagagatattactaaattcatcccagaaagtatcagcgccgctagtgacgccactttggtgatcaacacagagcatatgccttcaatgtttgtgccagtaggtgacgtcgtgcagtatggcttcctaaacctcagtggaaaaccaactcaccgcactatgatgtacaactttcccactaaggcaggccagtgtggaggggtggtcacatcagttgggaaggtcattggtattcacatagggggtaatggcaggcaaggtttctgtgcgggacttaagagaagctattttgctagtgaacaaggagagatccaatgggtcaaacctaataaagaaacagggaggctaaacatcaatgggccaacccgcaccaaactcgagcccagcgtgttccatgacgtctttaagggcaacaaagagccagcagtcttacacagtaaagacccccgcttagaggtggacttcgagcaggcactgttctctaagtatgtgggaaacacactgcatgaacctgatgtatacgtcagagaggcagcccttcactatgcgaatcagttgaagcagctagacatagacaccacccagatgagcatggtagaagcgtgctatggcacagacaaccttgaggccattgacctccacactagcgcaggttacccctacagtgccctgggaataaaaaagagagacattctagaccctaccactagggacgtgagcaagatgaagttttacatggataagtatggccttgacctcccttactccacctacgtcaaagacgagcttcgctcgatagataagatcaagaaggggaaatctcgactgattgaagccagcagcttgaacgactcagtctacctcaggatggcctttgggcacctctatgaaaccttccatgcaaaccctggaactgtgactggttcagctgtggggtgcaacccagatgtattctggagcaaactaccaatcttgctccccggttccctctttgcctttgactactcaggttatgatgctagtctcagcccagtttggttcagggcactggagctagtcctcagggagataggctatagtgaggaggcggtttcgcttattgaagggatcaaccacacacaccatgtgtaccgcaacaagacttattgtgtgcttggtgggatgccctcgggttgctcaggaacatccatctttaactcaatgattaataacattatcatcagaacactccttattaagacattcaagggtattgacttggatgaactcaatatggttgcctacggggacgatgtgctagccagttaccctttcccaattgactgtctagagctagcaagaacaggtaaggaatatggtctaaccatgacccctgctgataagtccccttgcttcaatgaagttaattgggaaaatgcaacctttctcaaaaggggcttcctgcccgacgaacaattcccattcttgatccaccctaccatgccaatgaaggagatccatgaatccatccgatggaccaaggatgcacgcaatactcaagatcacgtgcgatccttatgcctgttggcatggcacaacggcaagcaagaatatgaagaatttgtgagtacaattagatctgtcccagtaggaaaagcattggcaattcctaattatgagaatctgagacgcaattggctcgaattatttt-----agaggttagac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289357.1_Coxsackievirus_A2_isolate_CV-A2/P14/2013/China_complete_genome
------------------ttaaaa--cag-cct-gtgggttg----gccatccggt-gggcccac-t-gggcgttagcacactgattctacggaatctttgtgcgcct-g-ttttata-----tccct---c---ccct-a-----aaata-gtaacttagaagttg--------aacatttacac-----gaccaa-tagtgggcgtggcgcaccagccacgtcttgg-tcaagcactcctg-tttccccggactgagtatcaataggctac-tcacgtggctgaaggagaaagtgttcgttatccggctaactacttcgggaaacc-cagtaacaccatgaaagttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggctgatgagtcactgcg-aacctcacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaatacagacatggtgcg-aagagtctactgagctagttagtattcctccggcccctgaatgcggctaatcctaactgcggagcacatgccttcaatcca-gaggg-tggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatactggctgcttatggtgacaattgaa-------aggttgttaccatatagctattggattggccatccgg--tgactaacagagctttgatt-----tatcaa----ttcatt-gggttcgtgccct-----tatcatc--------------tacagtttattca-actttggtgtacttgttatatcttaatagtaggaa-------atgggggcgcaattttcaactcagcgctcaggttctcacgagacgagcaatgtagctcgtg-atggatcaaccattaacttcacgaacatcaactactataaggactcctatgcggcctcagcagctaagcatgatttcacccaagatcctggcaagttcacacaacctgtgttggatgctttacgcgaagcagtgccaccattacagtcaccgagtgctgaagcatgtggttacagtgacagagtggcgcagttgacagttggcaactcgactatcactactcaagaagctgccaatataatagtgtcttatgccgagtggccagagtattgcccagacacggacgccactgcggtcgacaaaccaacccgcccagatgtgtcagtgaacagattctacaccatgccagcaaccttgtgggagacag------------------aatcgaaaggatggtattggaagtttcctgatttactcaatgagataggcgtttttggacagaacgcccagtttcactacttatatagatcagggttttgcattcacgtgcagtgtaatgccagtaagttccatcaaggggctttgcttgtagcggtgattcctgagttcgttgtggctgagcaggatgccacccagaagcccaata---cagcaaagcacccttcgttggaagccacacagcccggcaagaaaggtaagacgtttagacacccttacgttcttgattgtggtgtgccattaagccaagcccttgtcttcccccaccagtggatcaacttacgcaccaacaactgcgctaccatagtagtcccatatattaatgccttgccttttgattctgcaataaaccattccaacttctcactggcagtgataccggtttgcccattgaaatataacacaggtgctaccccctcaatacccatcacgattacagttgcacccttatgctcggagtttgccgggttgcgccaagcagtcaagcaaggagtcccagtagagatgaaacctggaacaaaccaatttttaacaactgatgatgggacctcagcaccaatactacccggcttccaccccacaccaaccatacacatccccggtgaagtccatagtctgctagagttgtgtcaaattgagactatgctcgaggtgaacaa----------t------acatctaaggcagtggag------ctcgaccggttgaggatacctgtgtctgcacagagcg------ccgtggacaccctgtgcgcggcttttagggtggaccccggtagggacggcccctggcagtccactatggtaggacaattatgcagatactacacccaatggtcaggctccctgaagattacattcatgttcactggttcatttatggccactgggaagatgctggtcgcctacacaccaccaggaggcgcacaacctgccacacgggaactagctatgttgggcacacatgtaatctgggattttggcctgcaatcgtcggttacactagtggtcccatggataagcaacactcactatagggctgtggagactgggggtgtgtttgattactacaccactggcgtggtgaccatatggtaccagactaattttgtagtacctcctgacacccctaccagtgcttacatcctagcatttggggccggccaaaagaacttcactctcaagctatgcaaagacacggatgaaatcacccagcaagcgacactgcagggtgatggt--------atagaagatgctataa---ccaacacagt--------------------------gaatgctacaatagacagggtgttgagtcggccagtgtctcattca-----ccaacagctgccaacacccaggtgagccaacactccattgagactgggcgtgtacctgcactacaagctgctgaaacgggtgctacctccaatgctactgatgaaaacctgatagaaacaagatgtgtggttaacaaaaatagtgtggaagaggctagcataaatcacttcttctcccgagcagctttggttggtaaggtggagttaaatgacacaggtacgag----tgccacagggtttaccaactgggatatagatataatggggtatgctcaactgcgtagaaaactggagatgttcacctacatgcgcttcaatgctgagttcacgtttgtggctaccaccagaactgggcaagtgccatctagagtgctccagtatatgtatgttccacccggagcacccaaaccggacggtagggaggcctttcaatggcaatcctcgactaacccatcagtgttcagcaaaatgacggaccctccaccacaggtctcagtcccattcatgtcgcctgctagtgcgtaccaatggttctatgacggataccccacctttggagagcacagtggcgaagatagtctgcgctacggtcaatgccccaacaacacattgggcaccttttcagtgagattcgttagtgaagagataactaacgagcgaatcaccatcaggatatatatgaggcttaaacacgtgcgggcctgggtcccgcgcccactcaggtctgagccttatgtattgaagaatttcccaaattacactgcagt----gactcactcaaccgcta---accgtcccaccattac---aaacac------------------------------------------aggc------------------------------------------aaatttggtcagcaatcgggtgccatttacgtggggaattttagagtggtgaatcgtcatcttgccactcacaacgattgggcgaaccttgtttgggaagacagcacccgagacctgcttgtgtcgtccaccaccgcacaaggctgtgacacgatcgcccgttgcaactgtcagacaggagtatactactgtaactcccgaaggaagcactaccccgttagtttttcaaagcccagtcttgtcttcgtggaagccagtgaatactaccctgctaggtaccaatcccatctcatgcttgcagtaggtcactccgaaccaggtgattgcgggggcattctaaggtgccaacatggtgttgttggaattgtatctactgggggcaatggacttgttggctttgcagatgtcagagaccttctgtggctagatgaagaagcaatggagcagggagtctctgactatatcaaa-gggctcggtgacgcatttgggactggtttcaccgatgcagtctccagggaagtggaagctctcaagaatcatcttattggatctgaaggagccgttgaaaagatccttaagaacttaatcaaattgatctctgctctggtcatcgtgattaggagtgattatgacatggtcaccctcacggcaactctagctttgattgggtgtcacggtagcccctgggcatggatcaaagcaaagacagcatctattctgggcatccctatcgcccaaaaacagagcgcatcctggctcaaaaagttcaatgacatggccaacgctgctaagggattagaatgggtttccaataagatcagcaaatttatcgattggcttaaggagaaaattataccagcagccaaggaaaaggttgaattcctgaataatttgaaacaattgcca-ctactggagaatcagatctcaaacttggagcagtctgccgcttcacaggaagaccttgaagctatgttcgggaatgtgtcgtacctagccca---------tttctgtcgcaaataccaaccattgtatgctactgaagccaagagagtctatgccctggagaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcgtcagaggctcaccgggcaccgggaagtctttaccaaccggcattattgctcgagcaatagctgacaagtaccactccagtgtatattcgctcccgccagatccagatcactttgatgggtacaaacagcaggtggttacagttatggatgacttataccagaaccctgacggaaaggacatgtccttgttctgccaaatggtatccactgtagatttcatccctccgatgtcttatcttgacgagaacaggatgtctttcacctgtagatatgtcattgcatctactagcaaaagcaacatcatagtaccaacagtctcagattcagacgccatccctcgcctattttatatggattgggacattgaggtaacggactcatataaaacagtcctgggcagattggatgccggtcgggccgccaagctgtgttctgaaaataacactgccaacttcaaacgctgcagccctttggtgtgcggaaaagccattcagctcagagacaggaaatttaaggttaggtatagcgtggacacagtggtgtctgagcttattagggagtataacaataggtctgccattggaaatacaattgaagccctgttccagggaccacccaagtttagaccaatcaggatc---agccttgaggagaaaccagctccagatgctattagtgcccttcttgccagcgtggatagggaagaggtatgtcagtactgc-agagaccaaggctggatcatcccagaggctcccacaaatgttgatcgacacctcagtagagctgtgctgattatgcaatccatcgctacagtagtagcagttgtctctttggtgtatgttatctacaagctctttgctgggttccagggtgcttactctggtgcccctaagcaggtgctcaagaaacctactctccgcacggcaacagtgcagggcccaagcctcgactttgctctatcactactgagaaggaatatcaggcaagtccaaacagaccaagggcactttaccatgttgggagtcagagatcgcttagctgtccttccgcgacactcacaacctggaaagacaatctggatagagcacaaacttgtgaacgttctggacgctgttgaactagtggatgagcagggggtcaatttggagctgaccctagttaccctagataccaatgagaagttcagagatattaccaaattcatcccagaaagtatcagcgccgctagtgacgccactttagtgattaacacagagcatatgccctcaatgtttgtgcctgtaggtgacgtcgtgcagtatggcttcctaaatctcagcggaaaaccaactcaccgcactatgatgtacaactttcccactagggcaggtcagtgtggaggggtggtcacatcagttgggaaggtcattggcattcacatagggggtaatggcaggcaaggtttctgtgcgggacttaagagaagttattttgctagtgaacaaggagagatccaatgggtcaaacctaataaagagacagggaggctaaacatcaatgggccaacccgcaccaaactcgagcccagcgtgttccatgacgtctttaagggcaacaaagagccagcagtcttacacagtaaggacccccgcctagaggtggacttcgaacaagcactgttctctaagtatgtgggaaacacactgcatgaacctgatgtatacgtcagagaggcagcccttcactatgcgaatcagttgaagcagctagatatagacaccacccagatgagcatggaagaagcgtgctatggcacagacaaccttgaggccattgacctccgcactagcgcaggttacccctacagtgccctggggataaaaaagagagatattctagaccccaccactagagatgtgagcaagatgaagtattacatggataagtatggccttgacctaccttactccacctatgtcaaagacgagctccgctcgatagacaagatcaagaaggggaaatctcgactgattgaagccagcagcttgaacgactcagtctacctcagaatggcctttgggcacctctatgaaaccttccatgcaaaccctggaactgtgactggttcagctgtggggtgcaatccagatgtattttggagcaaactaccaatcttgctccctggttccctctttgcctttgactactcaggttatgatgctagtctcagcccagtctggttcagggcactggagctagtcctcagggagataggctatagtgaggaggcggttttgcttattgaaggaatcaaccacacacaccatgtgtaccgcaacaagacttattgtgtgcttggtgggatgccttcgggttgctcaggaacatccatctttaactcaatgattaataacattatcatcagaacactccttattaagacattcaagggtattgacctggatgaactcaatatggttgcctacggggacgatgtgctcgccagttaccccttcccaattgactgtctagaactagcaagaacaggtaaggaatatggtctaaccatgacccctgctgataagtccccttgcttcaatgaagttaattgggaaaatgcaacctttctcaaaaggggcttcctgcccgacgaacaattcccattcttgatccaccctaccatgccaatgaaggagatccatgaatccattcgatggaccaaggatgcacgcaatactcaagatcacgtgcgatccttatgcctgttggcatggcacaacggcaagcaagagtatgaagaatttgtgagcacaattagatctgtcccagtaggaaaagcattggcaattcccaattatgaaaatctgagacgcaattggctcgaattatttt-----agaggttagat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KX810065.1_Coxsackievirus_A2_strain_USA/2014-19510_complete_genome
---------------------------------------------------ccaca-gggcccac-g-gggcgctagcacactggtgttacggcacctttgtgcgcct-g-ttttact-----cccct---t---tccc----------ct-gtaatttagaagt--------------atcgcaccacg-gatcaa-tagcaggtgtgtcgcaccaggcacatctaga-tcaggcacttctg-tctccccggaccgagtatcaataggctgc-tagcgcggctgaaggagaaaacgttcgttacccggccaactacttcgagaagct-tagtaccaccatgaacgttgcagagtgtttcactcagca--caa-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcctat--------ggggcaa-cccatgggacgctctaatactgacatggtgcg-aagagcctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaaccgcggagcatgtactcacaaccca-gtggg-cagcatgtcgtaacgggtaactctgcggcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacattggctgcttatggtgacaactgaa-------ggattgttaccatatagctattggattggccatccgg--tgtccaacagagctctgatt-----tatcag----tttgtt-ggctttgtgcctt-----tatcacc--------------tacagcctactca-accttagtgtttttgatacaccttaacaataggaa-------atgggggcacagttttcaacgcagcgctccggctctcatgagacgagcaatgtagctcgag-aagggtccactatcaacttcactaatatcaactattacaaagactcttacgcagcctcggcggcaaagcatgactttacccaagaccctgggaaattcacccaacctgtattggatgcccttcgcgaggccgtaccgcccttgcagtcacctagtgctgaggcatgtggatatagtgatagagtagcacagttaacagttggcaattcaaccatcacaactcaagaagctgctaatataatagtatcctatgctgagtggcctgagtactgccccgatactgatgctactgcagttgataaaccaactcgcccagatgtgtcagtgaataggttctacactatgcctgcgactctttgggaaacag------------------agtcaaaagggtggtactggaaattccccgatttgctcaatgagataggggttttcggacaaaacgcccagtttcactatttgtataggtcagggttctgtattcatgtgcagtgcaatgctagtaaattccatcaaggagccctacttgtggcagtcatccctgaatttgtagtggctgagcaggatgccactcagaaacccaaca---ctgccaagcacccttcattggaagccacacaacctgggaagaaaggtaaagctttcaggcacccatacgttcttgattgcggtgtacccttgagtcaagcactcgtgttcccccaccaatggatcaacctacgcactaacaattgcgccactattgtggtcccttatgtcaatgctttgccattcgactctgcaataaatcattccaacttctcactagcagtaattcctgtgtgcccactaaaatacagcacgggtgctactccgtcaataccaattacgatcacagtcgcacctttgtgttcagaattcgctggattgcggcaagcggttaagcaaggagtgccagtagaaatgaaacccgggacgaatcaatttctgaccaccgatgatggaacatcagcaccgatactaccaggtttccaccccaccccaaccatacacatccctggtgaggtccatagccttctagaactatgccagatagagactatgctagaggtgaacaa----------c------acgtctagggcaatggaa------cttgaccggctaaggatacctgtgtcagcacagagcg------ctgtggatactttgtgtgcagcatttagagtggatcctggtagggatggcccttggcagtccactatggtggggcaattatgtaggtattacacccaatggtcaggctctcttaaaatcacatttatgttcactggctcctttatggccacgggaaaaatgcttgttgcctatactccaccagggggcgcacaaccagccacacgagaacttgccatgctaggcacacatgtgatatgggactttggattacaatcttcagtgacgctggtggttccatggatcagtaacacccactatagagcggtggagactgggggtgtatttgattactataccactggtgtggtaaccatatggtaccagactaactttgtggtgcctccagacaccccaaccagtgcttatattctagcattcggggcaggccagaaaaatttcaccctcaagttgtgcaaagatacagatgagattacccagcaagcagtcctgcaaggtgatggc--------attgaagatgctataa---ctaacacggt--------------------------aaatgccacaatagatagggtgctcaaccgaccagtgtcccactcg-----cctactgctgctaatacccaggtgagtcagcattccattgagacagggcgcgtgcctgcgcttcaagctgctgaaacaggggccacgtccaacgcttccgatgagaatttgatagaaacaaggtgtgtggtcaataaaaacagtgtggaagaagctagcattaatcacttcttttcccgtgcagctttagtgggcaaagtggaattaaatgatactggtaccag----tgccacaggattcactaactgggacatagacataatgggatacgcgcaattgcgcagaaaattagagatgttcacttacatgcgctttaacgcagagttcaccttcgtggcaaccaccagggcaggacaagtgccatctagagtccttcaatatatgtacgttccacctggagcacccaagcctgatggtagagaagccttccagtggcaatcttcaaccaacccgtctgtgtttagtaaaatgacagacccaccaccgcaggtttcagtgccattcatgtcacctgctagtgcgtatcagtggttttatgatgggtaccccacatttggagaacataccggagaggatagtttacggtatggacagtgcccgaacaacgcattgggtactttctcagtgaggttcgttagtgaagagattactaacgagcgaatcaccatcagaatatatatgaggctcaaacatgtgcgagcctgggttccacgccccttaagatctgaaccctatgtattaaagaatttcccaaattacactgctgt----aacgcatgtcaccgcca---accgaccctccattac---taacac------------------------------------------aggg------------------------------------------agatttgggcaacaatctggcgccatttatgtggggaactacagagtggtaaaccgacatcttgctactcacaatgattgggccaatctagtgtgggaagacagttcgcgagaccttcttgtgtcatccactactgcgcaagggtgtgacactattgcccgttgcaagtgccagacaggggtgtattattgcaattccaggaggaaacattacccagtcagtttctcaaagcccagcctggtctttgtggaagctagcgagtactaccctgctagataccagtctcatctcatgcttgcggtaggccattctgaaccaggagattgcggaggcattcttaggtgccagcacggcgtcgttggcatcgtgtctaccggtggtaatgggcttgttggttttgcagatgttagagaccttctgtggttggacgaggaagcaatggaacaaggagtgtctgattacatcaaa-gggcttggtgatgcatttggaactggcttcaccgatgcagtttccagagaagtggaagctctcaagaaccaccttattgggtctgaaggagctgttgaaaagatcctaaaaaatttaattaagctgatttctgctctggtcattgtaattagaagtgattacgatatggtcactcttacagcaactctagctctaattggatgtcacggcagcccctgggcttggatcaaagcgaagacagcagcgattctaggcatccctatcgcccagaagcaaagcgcgtcctggctcaaaaagttcaatgacatggccaatgccgctaaaggattggagtggatttctaacaagattagtaagttcatcaattggctcaaagagaagatcataccagcggctaaagagaaagtggaatttctaaacaacctgaagcagttgcca-ctgttagagaaccaaatttcaaacctagaacaatccgcagcttcgcaggaagatcttgaggcaatgtttgggaatgtgtcgtatcttgctca---------cttttgccgcaagtttcagccactttatgccatggaagctaagagagtttatgcactggagaaaagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcctcattatcagaggctctccaggcactggaaaatccctggcgactggcatcattgcccgagcaatagctgataagtaccattctagcgtgtactcgctcccaccagatccagatcatttcgatggctacaagcaacaagtggtcacagtcatggatgatctatgtcaaaatcctgatggcaaggacatgtcactattctgtcagatggtgtccactgtagatttcatcccaccgatggcttctttagaggaaaagggagtttctttcacatccaaatttgtcattgcatccaccaatgccagtaacatcattgtaccaacagtgtctgattcagacgccattcgtcgcaggttctatatggactgcgacatcgaggttactgactcatataagacggaacttggcagattggatgcggggcgagctgccaaactatgctcagagaacaatacagccaatttcaagcgctgtagcccactagtgtgtgggaaagctatccagctgagggacagaaaatctaaagttagatacagtgtggacacagtggtttctgaacttataagggaacacaacaataggtccgctatcggaaatacaattgaagcattgtttcagggaccacctaaatttaggcctattaggatc---aatctagaggagaagccagctccagacgctattagtgatcttcttgccagtgtggacagtgaagaggtgcgccagtattgc-agagaccaaggttggatcattccagagactcccaccaacgttgaacggcacctaaatagagcagtgttaattatgcagtccattgctacagtggtggcagttgtctcgctggtgtatgttatttacaagctctttgctggtttccagggcgcatactctggcgctcctaagcaggctcttaagaaacccatcctccgcacagcaacagtgcaaggtccaagtcttgattttgctttgtccctgttgaggagaaacattagacaggtccagacagatcaagggcattttaccatgctaggagtcagggaccgcttggctgtccttccacgacactcgcagcctggaaagacaatttgggtagagcataggctcgtgagcgttttggatgctgttgagttggtggatgaacaaggagttaatttagagctcaccctagtcaccctcgacactaacgaaaaatttagagacatcaccaaatttatcccagagaacattagtgctgccagtgatgccaccctggtgatcaatacagagcacatgccttcaatgtttgttccagtgggtgatgttgtgcagtatggttttctaaatcttagtggaaagcccacccatcgcaccatgatgtataacttccctaccaaagcaggacagtgtggaggggtggtgacatcagttggaaaggtcattggcatccacatagggggcaatggtaggcagggcttttgtgcgggactcaagagaagttatttcgccagtgaacaaggagagatccaatgggttaaacctaacaaggagactggaagacttaacatcaatggtccaactcgcactaagcttgaacccagtgtgtttcatgatgtgtttgagggcgacaaagagccagcagtcctgcacagtaaagatcctcgccttgaagtggattttgagcaagcactgttctccaagtacgtagggaacacactacatgagcctgatgagtacatcaaggaggcagccctccactatgcaaaccagttaaagcagctagacatcgacacctctcagatgagcatggaggaagcttgttatggtactgagaaccttgaggctattgacctccacactagtgcaggctacccatatagtgctctgggaataaagaaaagagacatcctagatcccaccactagggatgtgagcaagatgaaattttacatggacaagtatggtttggaccttccttactccacctatattaaggatgagcttcgctcggcagataagatcaagaagggaaagtcccgcttgattgaagccagcagcctcaatgattcagtgtacctcaggatggcttttgggcatctttacgagaccttccatgcaaaccccggaactgtcaccggttcggccgtggggtgtaatccggatgtgttctggagcaaactaccaattttgctgcctggctcactctttgcctttgattactcgggttatgatgctagtctcagccctgtttggtttagagcactggagttagtccttagagagataggctatagtgaggaggcaatctcactcattgaagggatcaaccatacacaccatgtgtatcgcaacaagacttattgtgtgcttggtgggatgccctcaggctgctcggggacatctatcttcaactcaatgatcaataacatcatcattagagcactgctcatcaaaacatttaagggtattgatttggatgaactaaatatggttgcctacggggatgacgtgcttgccagttatcctttcccaattgactgcttagaactggcaaaaacaggcaaggagtatggcttgactatgacacctgcggacaagtctccctgctttaatgaagttaactggggtaatgcaacctttctcaaaagaggctttttgcctgatgaccaattccctttcttgattcaccctaccatgccaatgaaggagatccatgaatccattcgatggaccaaggatgcacgaaacacccaagaccacgtgcgatccttgtgtctcctagcatggcataatggtaagcaggaatatgaaaaatttgtgaacacaattagatctgtcccagttggaaaagcattggccattccgaattatgaaaatctgagacgcaattggctcgaattgtttt-----agaggttaaac-------------------------gcac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aa------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ728259.1_Human_coxsackievirus_A2_strain_CVA2/SD/CHN/09_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgcgagcactctggtatcacgatacctttgtgcgcct-g-ttttata-----tccct---t---cccc-a-----ttaat-gtaacatagaagt--------------tatgcacccc--gatcaa-tagcaggcatggcgctccagctatgtcttga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-ttgcgcggttgaaggagaaaacgttcgttatccggctaactacttcgggaagct-tagtaatgccatggaagttgcggagagtttcgctcagca--ctt-cccca---gtgtagatcaggctgatgagtcaccgca-ttccccacgggtgaccgtggcggtggctgcgttggcggcctgcccat--------agggaga-cctatgggacgctctaatacggacatggtgtg-aagagcctactgagctagttagcagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcgtctccaatcca-gggga-tagcgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttacactggctgcttatggtgacaattgag-------gaattgttaccatatagctattggattggccatccgg--tgactaacagagctattatt-----taccaa----tttgtt-ggatttgtacctc-----tttcact--------------caccgtttaccac-acccttctatacctattacaactgaatagtagaag-------atggggacgcagttctcaacccaacgctccggttcccacgagacaagcaatatcgcgcggg-acggatcaaccatcaatttcactaatataaactactataaggattcttatgctgcctcagccgccaagcacgatttcacacaagacccgggaaaattcacacaacctgtattagatgctctgcgtgaagcagtgccgcccttacaatcaccaagtgctgaagcttgtggatacagtgaccgcgtggcccaattgactgtaggcaattctaccatcaccactcaagaagcggccaatatcatagtctcttatgccgagtggccagagtactgccctgatacagacgccaccgcggttgataaacccacccgcccggacgtttcagtgaacaggttttatacaatgccagcaactctgtgggaaacgg------------------agtctaaaggttggtactggaaattccctgatttacttaatgagataggagtctttggtcaaaatgcacaataccattacttgtataggtcaggattttgcatccatgttcagtgcaacgcgagcaaatttcatcagggcgctctattggtggcagtgatacccgaatttgttgtggctgagcaggacgcaacacagaagcccaata---cagctaaacacccggctcttgaggttacacaacctgggaagaaaggaaaagccttcaggcacccttatgttcttgattgtggtgtgccattgagtcaagccctcgtgtttccccaccaatggattaacctgcgcactaataattgtgccactattgtggtcccatacattaatgctctaccatttgactctgccataaatcactccaacttttcgttagcagtaatacctgtgtgccctctaaagtataacaccggcgccaccccttccataccaattactatcacagtggcgccactgtgctctgagtttgccggtttgcgtcaagcagtgaagcagggtgttcctgtagagatgaagcctgggaccaatcagttcctgaccacagatgatggtacatcagcaccaatactaccaggtttccaccccacccccactatccacattccaggagaagtacatagtctactcgaactgtgccaaatagaaactatgctagaggtaaacaa----------c------acaacaagagcagtggaa------ctagaccggttaaggataccggtgtcagcccaaagtg------cagtggacacattgtgcgcagcatttagagtagacccaggcagggatggcccttggcaatctactatggtaggtcagttatgcaggtattacacacagtggtcaggctccctgaaaatcacatttatgttcacggggtccttcatggcaacggggaaaatgttagttgcatatacccccccgggtggcgcccaaccggcctcccgagagcttgctatgcttggtactcatgtaatatgggattttggtctgcagtcgtcagtgacactcgtggttccctggatcagtaacactcactacagggctgtagaaactgggggtgtgtttgattactacaccactggtgttgtgacaatatggtaccagaccaatttcgtggtgcctcctgatacccccactagtgcgtacattttggcctttggagcggggcagaaaaacttcaccctgaaattgtgcaaggacactgatgagatcacccaacaggccatgttgcagggggatggt--------attgaggataccataa---ctaacacagt--------------------------caatgccaccatagatagagtgttaaatcgaccgatcacccattct-----cctacagccgctgatacccaagtgagccaacactccatcgaaacagggcgcgtaccggcgcttcaagctgctgagacaggagcaacatcaaacgccactgatgaaagtctgattgagacgagatgcgtggttaacaagaatagtgtggaagaggccagtattaaccactttttctctcgtgcggcattggtcggcaaggtggaattgaatgacacagggacgac----cgccacagggtttaccaactgggatatagacataatggggtacgctcaactacggaggaaattggagatgttcacctacatgcgttttaacgcagagttcaccttcgtagcaaccaccagggccgggcaagtaccatctagagtgctccaatacatgtatgttcctcctggggcacctaaaccagatggcagagaggcttttcaatggcaatcctcgaccaatccgtcggtgtttagtaaaatgacagacccgccaccacaagtctccgtgcctttcatgtcacctgctagtgcttatcagtggttctatgatggataccccacttttggagaacacaatggtgaggacagtttacgatacggacagtgtccaaataacgcgctcggcaccttctcagtaaggtttgtcagtgaggagaccaccaatgagcgcatcactatcagaatttacatgaggctcaaacacgtccgtgcctgggtcccgcggccactacggtctgaaccatatgtgctgaagaatttcccaaactacaccgcagt----cactcatgttacagcta---accgccccagtatcac---taatac------------------------------------------agga------------------------------------------aagtttggacaccaatcaggagccatatacgtgggcaattacagggtagtaaatagacacctcgccactcacaatgattgggcaaatttagtatgggagagctacgctagggacctcctggtttcctcaaccactgctcaaggttgcgacaccattgcccgctgcaactgtcagactggggtgtactactgcaactcccggagaaaacactacccagttagcttctccaaacccagcctaattttcgtggaagctagtgagtactatcctgcgcgatatcaatcccacctcatgcttgcacaaggtcactcagaacctggagattgtggcggcatccttaggtgccaacatggcgtcgtcggtatagtgtccactggtggtagtgggcttgttggcttcgcagacgttagggacctcttttggttggatgaagaagctatggagcagggtgtgtctgactacattaag-ggcctcggggacgcttttgggactggtttcactgatgcagtctctagagaggtcgaggctctcaagaaccatctcatagggtccgaaggagcggttgagagaatcttgaagaacctggttaaactgatttctgcactggtaattgtaatcaggagtgattacgatatggtcacccttacagcaaccctagctctaataggatgccacggtagtccttgggcttggatcaaatctaaaacagcatctatcttaggtattcctattgctcaaaagcagagcgcctcttggcttaagaaattcaatgacatggccaatgctgctaagggattggaatggatttccaacaaaatcagtaaattcatcgattggctcaaagaaaaaattataccagcagccaaggagaaggtcgaattcctaaataacttgaaacagttacct-ctactagagaaccagatctcaaatctggagcaatctgctgcctcacaagaagatcttgaagccatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaagttccaaccactatacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttgtcattaggggctcaccaggcacagggaagtccctagcaacaggcatcatcgcccgtgcgatagctgacaaataccactctagtgtgtactcacttccaccagaccctgaccactttgatggttataagcagcaagtggtcactgtcatggatgatctatgtcaaaaccccgatggcaaggacatgtcactgttctgtcaaatggtgtccactgtcgacttcatcccgccaatggcttccctcgaggagaaaggggtttctttcacatccaaatttgttatcgcatccaccaatgctagtaatattatagtaccaacagtgtccgactctgatgccatccgccgcagattctacatggattgtgacattgaagtgacagactcatacaaaacagatctaggtagattggacgctgggcgggccgcaaaactgtgctctgagaataacactgcgaacttcaaacgttgcagtcccctagtatgtggaaaggctatccagcttagggacaggaaatctaaagtcaggtacagtgtggacactgtggtctctgagctgattagggagtacaataataggtctgccattggtaatacgattgaagctttgtttcaaggtccacctaagttcagacccgtaagaatt---agcttggaagagaggccagccccagatgccattagcgatcttctagctagtgtggacagtgaagaagtgcgccagtactgc-agagaccaagggtggataatcccagaaacccccactaatgttgagcgccacctcaatagagcagtactagtcatgcaatcagttgctacagtggtagctgtcgtctcactagtgtatgtcatctacaagctctttgcaggattccagggtgcatattctggtgctcctaagcaggcactcaagaagccagtcctgcgcacagcaacggtacaaggtccaagtcttgactttgctctttctctactaaggaggaacattagacaagttcagacggatcaggggcattttaccatgctgggcgtcagagaccgcctggctgttctcccacgacactcacagcccggaaaaacaatctgggtggagcacaagctcgtgaacgtgctggatgctgttgagttagtggatgagcaaggggtcaacttagaattgactttgattactcttgacaccaatgaaaagttcagagacatcaccaaattcattccagagagtatcagtgctgctagcgacgccactttagtgatcaacacagagcatatgccctcaatgtttgtgccagtaggtgatgtcgtgcagtatggcttcctaaatctcagtggaaaaccaactcaccgcactatgatgtacaatttccccacaaaggcaggtcagtgtggaggagtagtcacatcagttgggaaggtcattggtattcacataggaggcaatggcagacagggtttttgcgcaggactcaagagaagctactttgctagtgaacaaggggagatccaatgggttaaacctaataaagaaacagggaggcttaacatcaatgggccaacccgcactaagctcgaacctagtgtgttctatgacgtctttgagggcaacaaggagccagcagtcttacatagtaaggaccctcgccttgaggtggatttcgagcaggcgttgttctctaagtacgtggggaacacactccatgaacctgatgaatacatcagagaggcagccctccattatgcaaatcagttgaaacagctggacatagacaccgcccagatgagcatggaagaggcttgctatggcacagataaccttgaagctatcgaccttcacactagcgcaggttacccttatagtgctctgggaataaagaagagagatattctagaccctaccaccagagatgtgagtaagatgaagttctacatggacaagtacggtctagacctcccatattccacctatgtcaaagacgagcttcgctcggtagacaagatcaagaaagggaaatcccgactgattgaggccagtagtttgaatgactcagtctatctcaggatggctttcgggcacctatatgaaactttccatgcaaaccctgggactgtgactggctcagctgtggggtgtaacccagatgtgttttggagcaagctaccgattctgctccctggttccctttttgcttttgactattcaggctatgatgctagcctcagtccagtttggtttagagcactggaattggtccttagagagataggctatagtgaggaggcggtctcgctcattgaagggattaaccacacgcaccatgtatatcgcaacaagacttattgtgtgcttggtgggatgccctcaggttgttcaggaacatccatcttcaattcaatgatcaacaatatcatcatcagagcactactcatcaagacatttaagggtattgatttagatgaactcaacatggttgcctacggggatgatgtgctcgctagttaccctttcccaattgattgtctggaactagcaagaacgggtaaagagtatggtctgactatgacccctgcagataagtccccgtgctttaatgaagttagttgggaaaatgcaacctttctcaagaggggtttcctgcctgatgatcaatttccattcttgattcaccctaccatgccaatgaaggagatccaagagtccattcgatggaccaaggatgcacgcaacactcaagatcacgtgcgatccttatgcttgttggcgtggcacaacggcaagcaagaatatgaaaaatttgtgagcacaattaggtcagtcccaataggaaaagcattggcaattcctaactatgaaaatctgagacgcaattggctcgaattatttt-----agaggttaaac-------------------------acac---------------ctcaaccc-caccagga----atctggt------c-g-----tgaacat-a-actg--------gtgggggtaaatgttt-t--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT353722.1_Coxsackievirus_A4_strain_1-E9-CA4_complete_genome
--------------------------------------------------------------------------------------------------------------------------------------------c-----aattc-gtaatttagaagt------------aatgcacaccatt-gatcaa-cagcaagcgtggcgcgccagccatgttcaga-tcaaatacttctg-ttttcccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttatccggctaactacttcgagaaacc-tagtagcaccatcgaaactacagagtgtttcgctcagca--ctt-tcccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------gggcttg-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcataccctcagtcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgtctaacagagcaattgta-----tactta----tttgtt-ggattcgttccac-----tatcata--------------tacatccactaac-accttatactatattataagattgaacacaagaaa-------atgggagcacaagtgtccacacagcgatctgggtctcatgagaccagcaccgtagcaaggg-aaggctcaacaataaatttcaccaatattaattattacaaggactcctatgcagcctctggtagcaagcaggattattcacaagacccttcaaagttcacccaaccagtcatggacgtgctaaaggaaatggcccccccgctgcaatctccatcagctgaggcatgtgggtatagtgatcgggttgcccaattaactgtaggaaactctactataacaacacaagaagctgcaaatatagtagtgggttatggcgagtggccaaattactgtcctgacacagatgccactgcagtagataaacccaccagacctgatgtttccgtgaataggttttacacattatctactaagtcttggacccaaa------------------actcgaaaggctggtactggaaattccctgatgtccttaacgatgttggagtttttggccagaatgcacagtaccactatctgtacagatcaggattttgtgttcacgtgcaatgtaatgccagtaaatttcatcagggagcactcttagtcgccatggtccccgaatttgtcatcgcttctaagagtgaacgttcaaaacccaatgacccctcacaatatccggctttttcagtgactaatccaggaaagaatgggagagaatttacagacccatatgttttggatgcagggataccattgagccaagcattgatctttccacatcaatggatcaaccttaggaccaacaattgtgctactattattatgccttacattaacgcggtcccttttgattcagccataaaccataacaattgtgggctggtagtggtgcctgtggcacccctcaagtatagtgccggcgccaccactgagatcccaatcaccattacaatagcccccttaaattcagaattcagcggtctcaggcaagccgtgaagcaaggtatccctgttgagatgaaacccggaaccaaccagtttttgaccacagatgatggagtgtctgcgcccatactacccggatttgaccctaccccagtaatacacatccctggggaagtcagtagtatacttgaattatgtcaagtggaaactatacttgaagtgaataa----------t------gtgactgatgtgcaaggt------gtaagccggttgctcataccagtaaaagctcaggaga------cagtggatacactctgtgcatcattccaggtcgaccctggacgcgatgggccttggcaatcaaccttgattgggcaattatgtagatattacactcagtggtcaggttccttagagattacttttatgtttacgggctcattcatggcaacaggtaagatgcttatagcatacacccctccaggcagtgcacaacccacaacacgtgaattggcaatgctcggcacacacataatctgggattttggattgcagtcatcagtcactcttgtggtgccctggataagtaacacacacttcagaactgtgaaaacagggggatacttagattattatgctacaggtgtggttaccatatggtaccagacaaacttcgtagtgccaccagacacaccgaacgaagctaatatcatagcaatgggagcagggcaaaagaatttcacgttaaagttgtgcaaagatacacctgagataacccagcaggccgtgttgcagggtgatgca--------atagctgacgctatac---aaaacacggt--------------------------cacatccaccatacagagagtcaatactaatgttgtcgggcaagat-----gcaacagccgccaacaccacacctagttcccatagtttgaacactggcctagttcctgccctccaggctgcggagacaggagcttcatctacagctacagatggcaacttgatagagacaagatgtgttgtaaactccaatggcactcgtgaaactcatattgaacatttcttctctaggtcaggactagtgggtgttatggaggtggatgatacaggcactgc----tggaaaggggttctcaaactgggatattgacattatggcgtttgtgcaactgcgccgcaagcttgaggcattcacatatatgcggtttgatgcagaattcaccttcgttaccaatctagagaatgggctcacgaacaacagtgtgatccaatacatgtatgtaccaccaggggcccctaaaccttatgctcgagaatcattccagtggcaaaccgcgaccaatccgtcagtttttcagaaaatggacagcccaccaccgcaagtgtcggtgccctttatgtcaccagctagtacctaccaatggttctatgatggttatcccacttttgggcctcactcagagacatctaacctatcttatgggcagtgtcctaacaacatgctggggacattctcagctagagttgtgagcaagcaaattaccaatcagaagtttcagattcgcatttatttgcggcttaagagagtaagggcatgggtccctagacccttgagatcacaaccatacatctacagaaattaccctacttatggtactac----cattcaacacttggccaaggatagacgcaaaatcac---tgaaactgactacaacactgat---------------caacgcacgcacggg------------------------------------------aaattcggtcaacaatctggagctgtttatgtaggaaattttagagtggtgaatcgccatctagccacacataacgactgggccaacctggtgtgggaagatagctcgagggatctcctcgtgtcatccacaacagcccaaggatgcgacaccattgcccgttgcggctgccagactggagtgtactattgcaactctaaaagaaaacattacccagttagtttttcaaaacccagcttgatttatgtggaggccagtgagtactaccctgccaggtatcaatcacacctgatgcttgcggtaggccactctgaaccaggggactgtgggggtatcctcagatgccaacacggtgttgtcggcatagtgtctactggtggcaacgggctagtcggttttgcagacatcagagatcttttatggttggatgaagaggccatggagcaaggggtgtccgattacattaag-ggactcggggacgctttcgggacaggcttcactgacgcagtctccagggaggttgaagcccttaagaaccaccttataggatccgaaggagcagttgagaaaatcttgaagaacctagttaaactgatctctgcactagtaattgtaatcaggagtgattacgatatggtcacccttacagcaaccctagctctaataggttgccacggtagtccttgggcttggatcaaagctaaaacagcatctatcttaggtattcctattgctcaaaagcagagcgcctcttggcttaagaaattcaatgacatggccaatgctgctaagggtttggaatggatttctaacaaaattagtaaattcatcgactggctcaaagaaaaaatcataccagcagccaaggagaaggttgagttcctaaacaacttgaaacagttgcct-ttactagagaaccaaatctcaaacctagagcaatctgctgcctcacaagaagatctcgaggttatgtttgggaatgtgtcgtaccttgccca---------tttttgtcgcaaatttcagccactgtacgctacagaagctaagagagtttacgccctggagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcaggggctcaccaggcacaggaaagtctctagcaacaggcatcatcgcccgtgcgatagctgataaatatcactctagtgtgtactcactcccaccagatcctgatcactttgatggctacaagcagcaagtggtcactgtcatggatgatctatgtcaaaaccctgatggtaaggacatgtcactgttctgccaaatggtgtccactgtcgacttcatcccaccaatggcttccctcgaggagaaaggggtctccttcacatccaaatttgttattgcatccaccaatgctagtaacatcatagtgccaacagtgtccgattccgacgccattcgccgcagattttacatggattgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgctgggcgggccgccaaactgtgctctgaaaataacaccgcaaacttcaaacgttgcaaccccctagtatgtgggaaggctattcagctcagggacaggaagtctaaagttaggtatagcgtggacactgtggtctctgagttgattagggagtacaataacaggtctaccattggtaacacgattgaagctttgtttcaaggtccacctaagttcagacccgtaagaatt---agtttggaagagaggccagccccagacgccattagcgacctcctagctagtgtggatagtgaagaagtgcgccagtactgc-agagatcaagggtggataatcccagaaacccctactaatgttgagcgccaccttaatagagcagtgctagtcatgcaatcaattgctacagtggtagctgtcgtctcgctagtgtatgtcatctacaagctctttgcaggattccagggtgcatactctggtgctcctaagcaggcactcaagaagcctgtcctgcgcacagcaacggtgcaaggcccaagtcttgacttcgctctttctctactgaggaggaacattaggcaagttcagactgatcagggccatttcaccatgctgggcgtcagagaccgcttggctgttctcccacgacactcgcagcctggaaagacaatctgggtggagcacaagcttgtgaacgtgctggacgctgttgagttagtggatgagcaaggggtcaatttggagttgactttgatcactcttgacaccaatgaaaagttcagagacatcaccaagttcatcccagaaagtattagtgctgctagcgacgccactttagtgatcaacacagaacacatgccttccatgtttgtgccagtgggtgatgtcgtgcagtatggtttcctaaatcttagtggaaaaccaactcaccgcaccatgatgtacaactttcccacaaaggcaggtcagtgtggaggagtagtcacatcagttggaaaggtcattggtattcacataggaggtaatggcaggcagggcttttgtgcaggactcaagagaagctactttgctagtgaacaaggggaaatccaatgggtcaaacctaataaagaaacagggaggcttaacatcaatgggccaacccgcaccaagcttgaacctagtgtgttccatgatgtctttgagggtaacaaggagccagcggtcttacatagtaaggaccctcgccttgaggtggatttcgagcaggcgttgttctctaagtatgtggggaacacactccatgagcctgatgagtacatcagagaggcagccttccactatgcaaatcagttgaaacagctggacatagacaccacccagatgagcatggaggaggcttgttatgggacagacaaccttgaagctatcgaccttcacactagtgcaggttatccttacagtgctctgggaataaagaagagagatattttagaccctaccaccagagatgtcagtaggatgaagttctacatggacaagtatggtcttgaccttccatattccacctatgtcaaagacgagcttcgctcgatagacaagatcaagaaagggaaatctcgtctgattgaggccagcagtttgaatgactcggtctatctcaggatggctttcgggcacctctatgaaactttccatgcaaaccctgggacagtaactggctcggctgtggggtgcaacccagatgtgttttggagtaagctgccaattctgctccctggttccctctttgcttttgactattcaggctacgatgctagcctcagccctgtttggtttagagcactggaattagtccttagagagataggctatagtgaggaagcggtttcgctcattgaagggatcaaccatacgcaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcgggttgttcaggaacatccatcttcaattcaatgatcaataatattatcatcagatcactactcatcaagacgttcaagggcatcgatttagatgaactcaacatggttgcctacggggacgatgtgctcgctagttaccctttcccaattgactgcctagaactagcaagaacaggtaaggagtatggcctgaccatgacccctgcagataagtccccgtgctttaatgaagttaattgggaaaatgcaacctttctcaagaggggtttcctgcctgatgatcaatttccattcttgattcaccctaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgtaacactcaagatcacgtgcgatctctgtgtctgttggcgtggcacaacggtaagcaagagtatgaaaaatttgtgagcacaattaggtccgtcccagtgggaaaagcattggcaattcccaattacgaaaatctgagacgcaattggctcgaattatttt-----agaggttaaac-------------------------acgc---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaa-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ541163.1_Coxsackievirus_A4_isolate_701/SH/CHN/2010_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccactcaca-gggcccac-t-gggcgctagcactctgattctgcggaatctttgtgcgcct-g-ttttaca-----ccccc---t---cccc-c-----aattc-gtaatttagaagt------------aatgcacaccatt-gatcaa-cagcaagcgtggcgcgccagccatgtttaga-tcaagtacttctg-ttttcccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatcgaaactgcagagtgtttcgttcagca--ctt-acccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgctggcggcctgcctat--------gggcttg-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcataccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgtctaacagagcaattgta-----tactta----tttgtt-gggttcgttccac-----tatcata--------------tacatccactaac-accttatactatattataagattgaacacaagaaa-------atgggagcacaagtgtccacacagcgatctgggtctcatgagaccagcaccgtagcaaggg-aaggctcaacaataaatttcactaatattaattattacaaggactcctatgcagcctctggcagcaagcaggattattcacaagacccttcaaagttcacccaaccagtcatggacgtgctaaaggaaatggcccccccgctgcaatccccatcagctgaggcatgtgggtatagtgatagggttgcccaattaactgtaggaaactctactataacaacacaagaagctgcaaatatagtagtgggttatggcgagtggccaaattactgtcctgacacagatgccactgcagtagataaacccaccagacctgatgtttccgtgaataggttttacacattatctactaagtcttggacccaaa------------------actcgaaaggctggtactggaaattccctgatgtccttaatgatgttggagtttttggccagaatgcacagtaccactatctgtacagatcaggattttgtgttcacgtgcaatgtaatgccagtaaatttcatcagggagcactcttagtcgccatggtccccgaattcgtcatcgcttctaagagtgaacgttcaaaacccaatgacccctcacaatatccggctttttcagtgactaatccaggaaagaatgggagagaatttacagacccatatgttttggatgcagggataccattgagccaagcattgatcttcccacatcaatggatcaaccttagaaccaacaattgtgctactattattatgccttacattaatgcggtcccttttgattcagccataaaccataacaattgtgggctggtagtggtgcctgtggcacccctcaagtatagtgccggcgccaccactgagatcccaatcactattacaatagcccccttaaattcagaattcagcggtctcaggcaagccgtgaagcaaggtatccctgttgagatgaaacccggaaccaaccagtttttgaccacagatgatggagtgtctgcacccatactacctggatttgaccctaccccagtaatacacatccctggggaagttagtagtatactcgaattatgtcaagtggaaactatacttgaagtgaataa----------t------gtgactgatgtgcaaggt------gtaagccggttgctcataccagtaaaagctcaggaga------cagtggatacactctgtgcatcattccaggtcgaccctggacgcgacgggccttggcaatcaactttgattggacaattatgtagatattacactcagtggtcaggttccttagagatcacttttatgtttacgggctcattcatggcaacaggtaagatgcttatagcatacacccctccaggcagtgcacaacccactacacgtgaattggcaatgctcggcacacacataatttgggattttggattgcagtcttcagtcactctcgtggtgccttggataagtaacacacactttagaactgtgaaaacagggggatacttagattattatgctacaggtgtggttaccatatggtaccagacaaacttcgtagtgccaccagacacgccgaacgaagctaatatcatagcaatgggagcagggcaaaagaatttcacgttaaagttgtgcaaagacacacctgagataacccagcaggccgtgttgcagggtgatgca--------atagccgacgctatac---aaaacacggt--------------------------tacatccaccatacagagggtcactactaatgttgttgggcaagat-----gcaacagccgccaacaccacacctagttcccatagtttgaacactggcctagttcctgccctccaggctgcggagacaggagcttcatctacagctacagatggcaacttgatagagacaagatgtgttgtaaactccaatggcactcgtgaaactcatattgaacatttcttctctaggtcaggattagtgggtgttatggaggtggatgatacaggcactgc----tggaaaggggttctcaaactgggatattgacattatggcgtttgtgcaactgcgccgtaagcttgaggcattcacatatatgcgatttgatgcagaattcaccttcgtcaccaatctagaaaatgggctcacgaacaacagtgtgattcaatatatgtatgtaccaccaggggcccctaaacctgatgctcgagaatcattccagtggcaaaccgcgaccaatccgtcagtttttcagaaaatggacagcccaccaccgcaagtgtcggtgccctttatgtcaccagctagtgcctaccaatggttctatgatggttatcccacttttgggcctcactcagagacatctaacctatcttatgggcagtgtcctaacaacatgctagggacattctcagctagagttgtgagcaagcaaattaccaatcagaagtttcagattcgcatttatttgcggcttaagagagtaagggcatgggtccctagacccttgagatcgcaaccatacatctacagaaattaccctacttatggtactac----cattcaatacctggccaaggatagacgcaaaatcac---tgaaactgactacaacgctgaa---------------caacgcacgcacggg------------------------------------------aaattcggtcaacaatctggagctgtttatgtaggaaattttagagtggtaaatcgccatctagccacacataacgactgggccaacctggtgtgggaagatagctcgagggatctcctcgtgtcgtccacaacagcccaaggatgcgacaccattgcccgctgcaattgccagactggggtgtactattgcaacaccaaaagaaaacattacccagttagtttttcaaaacctagcttgatctatgtggaggccagtgagtactaccctgccaggtatcaatcacacctgatacttgcggtaggtcactctgaaccaggggactgtgggggtatcctcagatgccaacatggtgttgtcggcatagtgtccactggtggcaacggactagtcggttttgcagacatcagagaccttttgtggttggatgaagaggccatggagcaaggggtgtccgattacattaag-ggacttggggacgctttcggaacaggtttcactgacgcagtctccagggaggttgaagcccttaagaatcaccttatagggtccgaaggagcagttgagaaaatcttgaagaacctagttaaactgatctctgcactagtaattgtaatcaggagcgattacgatatggtcacccttacagcaaccctagctctaataggttgccacggtagtccttgggcttggatcaaagctaaaacagcatctatcttaggtattcctattgctcaaaagcagagcgcctcttggcttaagaaattcaatgacatggccaatgctgctaagggtttggaatggatttctaacaaaattagtaaattcatcgactggctcaaagaaaaaatcataccagcagccaaggagaaggtcgagttcctaaacaacttgaaacagttgcct-ttactagaaaaccaaatctcaaacctagagcaatctgctgcctcacaagaagatctcgaggtcatgtttgggaatgtgtcataccttgccca---------tttctgtcgcaaatttcagccactgtacgctacagaagctaagagggtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcaggggctcaccaggcacagggaagtctctagcaacaggcatcatcgccagagcgatagctgacaaatatcactctagtgtgtactcactcccaccagatcctgatcactttgatggctacaagcagcaggtggtcactgtcatggatgacctatgtcaaaaccctgatggtaaggacatgtcactgttctgccaaatggtgtccactgtcgacttcattccaccaatggcttccctcgaggagaaaggggtctcctttacatccaaatttgttattgcatccaccaatgctagtaacatcatagtgccaacagtgtccgattccgatgccattcgccgcagattttacatggattgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgctgggcgggccgccaaactgtgctctgaaaataacaccgcaaacttcaaacgttgcagccccctagtatgtgggaaggctgttcagctcagggacaggaagtctaaagttaggtatagcgtggacactgtggtctctgagttgattagggagtacaataacaggtctaccattggtaacacgattgaagctttgtttcaaggtctacctaagttcaggcccgtaagaatt---agcttggaagagaggccagccccagacgccattagcgacctcctagctagtgtggatagtgaggaagtgcgccagtattgc-agagatcaagggtggataatcccagaaacccctactaatgttgagcgccaccttaatagagcagtgctagtcatgcaatcaattgctacagtggtagctgtcgtctcgctagtgtatgttatctacaagctctttgcaggattccagggtgcatattctggtgctcctaagcaggcactcaagaagcctgtcctgcgcacagcaacggtgcaaggtccaagtcttgactttgctctttctctactaaggaggaatattagacaagttcagactgatcaagggcatttcaccatgctgggcgtcagagaccgcttggctgttctcccacgacactcacagcccggaaagacaatctgggtggagcacaagcttgtggacgtgctggatgctgttgagttagtggatgagcaaggggttaatttggagttaactttgattactcttgacaccaatgaaaagttcagagacatcaccaagttcatcccagaaagtattagtgctgctagtgacgccactttagtgatcaacacagaacacatgccttccatgtttgtgccagtgggtgatgtcgtgcagtatggcttcctaaatcttagtggaaaaccaactcaccgcaccatgatgtacaattttcccacaaaggcaggtcagtgcggaggagtagtcacatcagttggaaaggtcattggtattcacataggaggtaatggcaggcagggcttttgtgcaggactcaagagaagctactttgctagtgaacaaggggaaatccaatgggttaaacctaatagagaaacagggaggcttaacatcaatgggccaacccgcactaagctcgaacctagtgtgtttcatgatgtctttgagggcaacaaggagccagcggtcttacatagtaaggaccctcgccttgaggtggatttcgagcaggcgttgttctctaagtatgtggggaacacactccatgagcctgatgagtacatcagagaggcagccctccactatgcaaatcagttgaaacagctggacatagacactacccagatgagcatggaggaggcttgttatgggacagacaaccttgaagctattgaccttcacactagtgcaggttatccttacagtgctctgggaataaagaagagagatattttagaccctaccaccagagacgtcagtaggatgaagttctacatggacaagtatggtcttgaccttccatattccacctatgtcaaagatgagcttcgctcgatagacaagatcaagaaagggaaatctcgcctaattgaggccagcagtttgaatgactcggtctatctcaggatggctttcgggcacctctatgaaactttccatgctaaccctgggacagtgactggctcggctgtggggtgcaacccagatgtgttttggagtaagctaccaatcctgctccctggttccctctttgcttttgactattcaggctacgatgctagcctcagtccagtttggtttagagcactggaattagtccttagagagataggctatagtgaggaagcggtttcgctcattgaagggatcaaccatacgcaccatgtatatcgcaacaaaacttattgcatacttggtgggatgccctcgggttgttcaggaacatccatcttcaattcaatgatcaataatattattatcagatcactactcatcaagacattcaagggcatcgatttagatgaactcaacatggttgcctacggggacgatgtactcgctagttaccctttcccaattgactgcctagaactagcaagaacaggtaaggagtatggtttgaccatgacccctgcagataagtccccgtgctttaatgaagttaattgggaaaatgcaacctttctcaagaggggtttcctgcctgatgatcaatttcccttcttgattcaccctaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgtaacactcaggatcacgtgcgatctctgtgccagttggcgtggcacaacggtaagcaagagtatgaaaaatttgtgagcacaattaggtccgtcccagtgggaaaagcgttggcaattcccaattacgaaaatctgagacgcaattggctcgaattatttt-----agaggttaaac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-a-actg--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ728260.1_Human_coxsackievirus_A4_strain_CVA4/SZ/CHN/09_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccactcaca-gggcccac-t-gggcgctagcactctgattctgcggaatctttgtgcgcct-g-ttttata-----acccc---t---cccc-c-----aattc-gtaatttagaagt------------aatgcacaccatt-gatcaa-cagcaagcgtggcgcgccagccatgtttaga-tcaagcacttctg-ttttcccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatcgaaactgcagagtgtttcgctcagca--ctt-tcccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------gggctta-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcataccctcaaccca-ggggg-cggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgtctaacagagcaattgta-----tactta----tttgtt-ggattcgttccac-----tatcata--------------tatatccactaac-accttatactatattataggattgaacacaagaaa-------atgggagcgcaagtgtccacacagcgatctgggtctcatgagaccagcaccgtagcaaggg-aaggctcaacaataaatttcactaatattaattattacaaggactcttatgcagcctctggcagcaagcaggattattcacaagacccttcaaagttcacccaaccagtcatggacgtgctaaaggaaatggcccccccgctgcaatctccatcagctgaggcatgcgggtatagtgatagggttgcccaattaactgtaggaaactctactataacaacacaagaagctgcaaatatagtagtgggttatggcgagtggccaaattactgtcctgacacagatgccactgcagtagataaacccaccagacctgatgtttccgtgaataggttttacacattatctaccaagtcttggacccaaa------------------actcgagaggctggtactggaaatttcctgatgtccttaatgatgttggagtttttggccagaatgcacagtaccactatctgtacagatcaggattttgtgttcacgtgcaatgtaatgccagtaaatttcatcagggagcactcttagttgccatggtccccgaattcgtcatcgcttctaagagtgaacgttcaaaacccaatgaccccgcacaatatccggctttttcagtgactaatccaggaaagaatgggagagaatttacagacccatatgttttggatgcagggataccattgagccaagcattgatcttcccacatcaatggatcaaccttaggaccaacaattgtgctactattattatgccttacattaacgcggtcccttttgattcagccataaaccataacaattgtgggctgatagtggtgcctgtggcacccctcaagtatagtgccggcgccaccactgagatcccaatcactattacaatagcccccttaaattcagaattcagcggtctcaggcaagccgtgaagcaaggtatccctgttgagatgaaacccggaaccaaccagtttttgaccacagatgatggagtgtctgcacccatactacctggatttgaccctactccagtaatacacatccctggggaagttagtagtatacttgaattatgtcaagtggaaactatacttgaagtgaataa----------t------gtgactgatgtgcaaggt------gtaagccggttgctcataccagtaaaagctcaggaga------cagtggatacactctgtgcatcattccaggtcgaccctggacgcgacgggccttggcaatcaactttgattgggcaattatgtagatattacactcagtggtcaggttccttagagatcactttcatgtttacgggctcattcatggcaacaggtaagatgcttatagcatacacccctccaggcagtgcacaacccacaacacgtgaactagcaatgctcggcacacacataatctgggattttggattgcagtcttcagtcactctcgtggtgccctggataagtaacacacactttagaactgtgaaaacagggggatacttagattattatgctacaggtgtggttaccatatggtaccagacaaacttcgtagtgccaccagacacgccgaacgaagctaatatcatagcaatgggagcagggcaaaagaatttcacgttaaagttgtgcaaagatacacctgagataacccagcaggccgtgttgcagggtgatgca--------atagccgacgctatac---aaaacacggt--------------------------cacatccaccatacagagggtcaccactaatgttgtcgggcaagat-----gcaacagccgccaacaccacacctagttcccatagtttgaacactggcttagttcctgccctccaggctgcggagacaggagcttcgtctacagctacagatggcaacttgatagagacaagatgtgttgtaaactccaatggcactcgtgaaactcatattgaacatttcttctctaggtcaggactagtgggtgttatggaggtggatgatacaggcactgc----tggaaaggggttctcaaactgggatattgacattatggcgtttgtgcaactgcgccgtaagcttgaggtattcacatatatgcggtttgatgcagaattcaccttcgtcaccaatctagaaaatgggctcacgaacaacagtgtgatccaatacatgtatgtgccaccaggggcccctaaacctgatgctcgagaatcgttccagtggcaaaccgcgaccaatccgtcagtttttcagaaaatggacagcccaccaccgcaagtgtcggtgcccttcatgtcaccagctagtacctaccaatggttctatgatggttatcccacttttgggcctcactcagagacatctaacctatcttatgggcagtgtcctaacaacatgttagggacattctcagctagagttgtgagcaagcaaatcactaatcagaagtttcagattcgcatttatttgcggcttaagagagtgagggcatgggtccctagacccttgagatcacaaccatacatctacagaaattaccctacttatggcactac----cattcaacacctggccaaggatagacgcaaaatcac---tgaaactgactacaacgctgag---------------caacgctcgcacgga------------------------------------------aaattcggtcaacaatctggagctgtttatgtaggaaattttagagtggtgaatcgccatctagccacacataacgactgggccaacctggtgtgggaagatagctcgagggatctcctcgtgtcgtccacaacagcccaaggatgcgacactattgcccgttgcaactgccagactggagtgtactattgcaactctaaaagaaaacattacccagttagtttttcaaaacctagcttgatctatgtggaggccagtgagtactaccctgccaggtatcaatcacacctgatgcttgcggaaggccactctgaaccaggggactgtgggggtattcttagatgccaacacggtgttgtcggcattgtgtctactggtggcaacggactagtcggttttgcagacatcagagatcttttgtggctggatgaagaggccatggagcaaggggtgtccgattacattaag-ggacttggggacgctttcggaacaggtttcactgacgcagtctccagggaggttgaagcccttaagaatcaccttatagggtccgaaggagcagttgagaaaatcttgaagaacctagttaaactgatctctgcactagtaattgtaatcaggagtgattacgatatggtcacccttacagcaaccctagctctaataggttgtcacggtagtccttgggcttggatcaaagctaaaacagcatctatcttaggtattcctattgctcaaaagcagagcgcctcttggcttaagaaattcaatgacatggccaatgctgctaagggtttggaatggatttctaacaaaattagtaaattcatcgactggctcaaggaaaaaatcataccagcagccaaggagaaggttgagttcctaaacaacttgaaacagttgcct-ttactagagaaccaaatctcaaacctagagcaatctgctgcctcacaagaagatctcgaggtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaatttcagccactatacgctacagaagctaagagagtttacgccctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggttcaccaggcacagggaagtctctagcaacaggcatcatcgcccgtgcgatagctgataaatatcactctagtgtgtactcactcccaccagatcctgatcactttgatggctacaagcagcaagtggtcactgtcatggatgacctgtgtcaaaaccctgatggtaaggacatgtcgctgttctgccaaatggtgtccactgtcgacttcatcccaccaatggcttccctcgaggagaaaggggtctctttcacatccaaatttgttatcgcatccaccaatgctagcaacatcatagtgccaacagtgtccgattctgatgccattcgccgcagattttacatggattgtgacattgaagtgacagactcatacaaaacagatctaggtagactggatgctgggcgggccgccaaactgtgctctgaaaataacaccgcaaacttcaaacgttgtagccccctagtatgtgggaaggctattcagctcagggacaggaaatctaaagttaggtacagcgtggacactgtggtctctgaattgattagggagtacaataacaggtctaccattggtaacacgattgaagctttgtttcaaggtccacccaagttcagacctgtaagaatt---agcttggaagagaggccagccccagacgccattagcgacctcctagctagtgtggatagtgaagaagtgcgccagtactgc-agggaccaagggtggataatcccagaaacccctactaatgttgagcgccaccttaatagagcagtgtttgtcgtgcaatcaattactacagtggtagctgtcgtctcgctagtgtatgtcatctacaagctctttgcaggattccagggtgcatattctggtgctcctaagcaggcactcaagaagcctgtcctgcgcacagcaacggtgcaaggtccaagtcttgactttgctctttctctactaaggaggaacatcagacaagttcagacggatcaggggcatttcaccatgctgggcgtcagagaccgcttggctgttctcccacgacactcgcagcccggaaagacaatctgggtggagcacaagcttgtgaacgtgctggatgctgttgagttagtggatgagcaaggggtcaatttggagttaactttgattactcttgacaccaatgaaaagttcagagacatcaccaagttcatcccagaaagtattagtgctgctagcgacgccactttagtgatcaacacagaacacatgccttccatgtttgtgccagtgggtgatgtcgtgcagtatggtttcctaaatcttagtggaaaaccaactcaccgcaccatgatgtacaattttcccacaaaggcgggtcagtgtggaggagtagttacatcagttggaaaggtcattggtattcacataggaggtaatggcaggcagggcttttgtgcaggactcaagagaagctactttgctagtgaacaaggggaaatccaatgggttaaacctaataaagaaacagggaggcttaacatcaatgggccaacccgcactaagcttgaacctagtgtgttccatgacgtctttgagggcaacaaggagccagcggtcttacatagtaaggaccctcgccttgaggtggatttcgagcaggcgttgttctctaagtatgtggggaacacactccatgagcctgatgagtacatcagagaggcagccctccactatgcaaatcagttgaaacagctggacatagataccacccagatgagcatggaggaggcttgttatgggacagacaaccttgaagctatcgaccttcacactagtgcaggttatccttacagtgccctgggaataaagaagagagatattttagaccctaccaccagagacgtcagtaggatgaagttctacatggacaagtatggtcttgaccttccatattccacctatgtcaaagacgagcttcgctcgatagacaagatcaagaaagggaaatctcgcctgattgaggccagcagtttgaatgactcggtctatctcaggatggctttcgggcacctctatgaaactttccatgcaaaccctgggacagtgactggctcggctgtggggtgcaacccagatgtgttttggagtaagctaccaattctgctccctggttccctctttgcttttgattattcaggctacgatgctagcctcagtccagtttggtttagagcactggaattagtccttagagagataggctatagtgaggaggcggtctcgctcattgaagggatcaaccatacgcaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcgggttgttcaggaacatccatcttcaattcaatgatcaataatatcatcatcagatcactactcatcaagacattcaagggcatcgatttagatgaactcaacatggttgcctacggggacgatgtgctcgctagttaccctttcccaattgactgcctagaattagcaagaacaggtaaggagtatggcctgaccatgacccctgcagataagtccccgtgctttaatgaagttaattgggaaaatgcaacctttctcaagaggggcttcctgcctgatgatcaatttccattcttgattcaccctaccatgccaatgaaggagattcatgagtccattcgatggaccaaggatgcgcgtaacactcaagatcacgtgcgatctctgtgcctgttggcgtggcacaacggtaagcaagagtatgaaaaatttgtgagcacaattaggtccgtcccagtaggaaaagcattggcaattcccaattacgaaaatctgagacgcaattggctcgaattatttt-----agaggttaaac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KJ541164.1_Coxsackievirus_A4_isolate_1047/SH/CHN/2010_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccactcaca-gggcccac-t-gggcgctagcactctgattctgcggaatctttgtgcgcct-g-ttttata-----acccc---t---cccc-c-----aattc-gtaatttagaagt------------gatgcacaccatt-gatcaa-cagcaagcgtggcgcaccagccatgtttaga-tcaagtacttctg-tttccccggactgagtatcaataaactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaact-tagtagcaccatcgaaactgcagagcgtttcgctcagca--ctt-tcccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------gggcttg-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcataccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcctatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccag--tgtctaacagagcaattgta-----tactta----tttgtt-ggattcgttccac-----tatcata--------------tacatccactaac-accttatactatattataagattgaacacaagaaa-------atgggagcacaagtgtccacacagcgatctgggtctcatgagaccagcaccgtagcaaggg-aaggctcaacaataaatttcactaatattaattattacaaggactcctatgcagcctctggcagcaagcaggattattcacaagacccttcaaagttcacccaaccagtcatggacgtgctgaaagaaatggcccccccgctgcaatctccatcagctgaggcatgtgggtatagtgatagggttgcccaattaactgtaggaaactccactataacaacacaagaggctgcaaacatagtagtgggttatggcgagtggccaaattattgtcctgacacagatgccactgcagtagataaacccaccagacctgatgtttccgtgaataggttttatacattatctactaagtcttggacccaaa------------------attcgaaaggctggtactggaaattccctgatgtccttaatgatgttggagtttttggtcagaatgcacagtaccactatctgtacagatcaggattttgtgttcatgtgcaatgtaatgccagtaaatttcatcagggagcactcttagtcgccatggtccccgaattcgtcatcgcttctaagagtgaacgttcaaaacccaatgaccctgcacaatatccggctttctcagtgactaatccaggaaagaatgggaaggaatttacagacccatatgttttggatgcagggataccactgagccaagcattgatcttcccacatcaatggatcaaccttaggaccaacaattgtgctactattattatgccttacattaacgcggtcccttttgattcagccataaaccataacaattgtgggctggtagtggtgcctgtggcacccctcaagtatagtgccggcgccaccactgagatcccaatcactattacaatagcccccttaaattcagaattcagcggtctcaggcaagccgtgaagcaaggtatccctgttgagatgaaacccggaaccaaccagtttttgaccacagatgatggagtgtctgcgcccatactaccaggatttgaccctactccagtaatacacatccctggggaagttagtagtatacttgaattatgtcaagtggaaactatacttgaagtgaataa----------t------gtgactgatgtgcaaggc------gtaagccggttgcttataccagtaaaagctcaggaga------cagtggatacactctgtgcatcattccaggtcgaccctggacgcgacgggccttggcaatcaactttaattggacaattatgtagatattacactcagtggtcaggttccttagaaatcacttttatgtttacaggctcattcatggcaacaggtaagatgcttatagcatacacccctccaggcagtgcacaacccacaacacgtgagttagcaatgctcggcacacacataatttgggattttggattgcagtcttcagtcactctcgtggtgccctggataagtaacacacactttagaactgtgaaaacagggggatacttagattattatgctacaggtgtggttaccatatggtaccagacaaacttcgtagtgccaccggacacgccgaacgaagctaatatcatagcaatgggagcagggcaaaagaatttcacgttgaagttgtgcaaagatacacctgagataacccagcaggccgtgttgcagggtgatgca--------atagccgatgctatac---aaaacacggt--------------------------cacgtctaccatacagagggtcaccaataatgctgtcgggcaagac-----gcaacagccgccaacaccacacctagctcacatagtttgaacactggcctagttcctgccctccaggctgcggagacaggagcgtcatctacagctacagatggcaacttgatagagacaagatgtgttgtaaattccaatggcactcgtgaaacccatattgaacatttcttctctaggtcaggactagtgggtgttatggaggtggatgatacaggcactgc----tggaaaggggttctcaaactgggatattgacattatggcgtttgtgcaactgcgccgtaagcttgaggcattcacatatatgcggtttgatgcggaattcacctttgtcaccaatctagaaaatgggctcacgaacaacagtgtgattcaatacatgtatgtaccaccaggggcccctaaacctgatgctcgagaatcgttccagtggcaaaccgcgaccaatccgtcggtttttcagaaaatggacagcccaccaccgcaagtatcggtgccctttatgtcaccagctagtacctaccaatggttctatgatggttatcccacttttgggcctcactcagagacatctaacctatcttatgggcagtgtcctaacaacatgctagggacattctcagctagagttgtgagcaagcaaattaccaatcagaagtttcagattcgcatttatttgcggcttaagagagtgagggcatgggtccctaggcccttgagatcgcaaccatacatctacagaaattaccctacttatggcactac----cattcaacacctggccaaggatagacgcaaaatcac---cgaaactgactacaacgctgag---------------caacgcacgcacggg------------------------------------------aaattcggtcaacaatctggagctgtttatgtaggaaattttagagtggtgaatcgccatctagccacgcataacgactgggctaacctggtgtgggaagatagctcgagggatctcctcgtgtcgtccacaacagcccaaggatgcgacaccatcgcccgttgcaactgccagactggagtgtactattgcaactctaagagaaaacattacccagttagtttttcaaaacctagcttgatctatgtggaggctagtgaatactaccctgccaggtatcaatcacacctgatgcttgcggaaggccactctgaaccaggggactgtgggggtatcctcagatgccaacacggtgttgtcggcatagtgtctactggtggcaatggactagtcggttttgcagacatcagagatcttttgtggttggatgaagaggccatggagcaaggggtgtccgattacataaag-ggacttggggacgctttcggaacaggtttcactgacgcggtctccagggaggttgaagcccttaagaattaccttgtagggtccgaaggagcggttgagaaaatcttgaagaacctagttaaactgatctctgcactagtgatcgtaatcaggagtgattacgatatggtcacccttacagcaaccctagctctaataggttgccacggtagtccttgggcttggatcaaagctaaaacagcatttatcttaggtattcctattgctcaaaaacagagcgcctcttggcttaagaaattcaatgacatggccaatgctgctaagggtttggaatggatttctaacaaaattagtaaattcatcgactggttcaaagaaaagatcataccagcagccaaggagaaggttgagttcctaaacaacttgaaacagttgcct-ttactagagaaccaaatctcaaacctagagcaatctgctgcctcacaagaagaccttgaggtcatgtttgggaatgtgtcgtaccttgccca---------tttctgtcgcaaatttcagccactgtacgctacagaagctaagagagtttacgctctagagaagagaatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttatcatcaggggctcaccaggcacagggaagtctctagcaacaggcatcatcgcccgtgcgatagctgataaatatcactctagtgtgtactcactcccaccagatcctgatcactttgatggctacaagcagcaagtggtcactgtcatggatgacctatgtcaaaaccctgatggtaaggacatgtcactgttctgccaaatggtgtccactgtcgacttcatcccaccaatggcttccctcgaggagaaaggggtctctttcacatccaaatttgttattgcatccaccaatgctagtaacatcatagtgccaacagtgtccgattccgatgccattcgccgcagattttatatggattgtgacattgaagtgacagactcatacaaaacagatctaggtagattggatgctgggcgggccgccaaactatgctctgaaaataacaccgcaaacttcaaacgttgcagcccccttgtttgtgggaaggctattcaacttagggacaggaagtctaaagttaggtatagtgtggacactgtggtctctgagttgattagggagtacaataataggtctaccattggcaacacgattgaagctttgtttcaaggtccacctaagttcagacccgtaagaatt---agcttggaggagaggccagccccagacgccattagcgacctcctagctagtgtggatagtgaagaagtgcgccagtactgc-agagaccaagggtggataatcccagaaacccctactaatgttgaacgccaccttaatagagcagtgctagttatgcaatcaattgctacagtggtagctgtcgtctcgctagtgtacgtcatctataagctctttgcaggattccagggtgcatattctggtgctcctaaacaggcactcaagaagcccgtcctgcgctcagcaacggtgcaaggtccgagtctcgactttgctctttctctgctaaggaggaacattagacaagttcagacggatcaggggcatttcaccatgctgggcgtcagagaccgcttggctgttctcccacgacactcgcagcccggaaagacaatctgggtggagcacaagctcgtaaacgtgctggatgctgttgagttagtggatgagcaaggggttaatttggagttaactttgattactcttgacactaatgaaaagttcagagacatcaccaagttcatcccagaaagtattagtgctgctagcgacgccactttagtgatcaacacagagcacatgccctccatgtttgtgccagtgggtgatgtcgtgcagtatggtttcctaaatcttagtggaaaaccaactcaccgcaccatgatgtacaattttcccacaaaggcaggtcagtgtggaggagtagtcacatcagttggaaaggtcattggtattcacatagggggtaatggcaggcagggcttttgtgcaggactcaagagaagctactttgctagtgaacaaggggaaatccaatgggttaaacctaataaagaaacagggaggcttaacatcaatgggccaacccgcactaagcttgaacctagtgtgttccatgatgtctttgagggtaacaaggagccagcggtcttacatagtaaggacccccgccttgaggtggatttcgaacaggcattgttctctaagtatgtggggaacacactccatgagcctgatgagtacatcagagaggcggccctccactatgcaaatcagttgaaacagctggacatagacaccacccagatgagcatggaggaggcttgttatgggacagacaatcttgaagctatcgaccttcacaccagtgcaggttatccttatagtgctctgggaataaagaagagagatattttagaccctaccaccagagacgtcagtaggatgaagttctacatggacaagtatggtcttgaccttccatattccacctatgtcaaagacgagcttcgctcgatagacaagatcaagaaagggaaatctcgtctgattgaggccagcagtttgaacgactcggtctatctcagaatggctttcgggcacctctatgaagctttccatgcaaaccctgggacagtgactggctcggctgtggggtgcaacccagatgtgttttggagtaagctaccaattctgctccctggctccctctttgcttttgactattcaggctatgatgctagcctcagtccagtttggtttagagcgctggaactagtccttagagagataggctatagtgaggaggcggtttcgcttattgaagggatcaaccatacgcaccatgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcaggttgttcgggaacatccatcttcaattcaatgatcaataatattatcatcagatcactactcatcaagacgttcaagggcatcgatttagatgaactcaacatggttgcctacggggacgatgtgctcgctagttaccctttcccaattgactgcctagaactagcaagaacgggtaaggagtatggcctgaccatgacccctgcagataagtccccatgctttaatgaagttaattgggaaaatgcaaccttcctcaagaggggtttcctgcctgatgatcagtttccattcttgattcaccctaccatgccaatgaaggagattcatgagtccattcgatggactaaggatgcgcgcaacactcaagatcacgtgcgatctctgtgcctgttggcgtggcacaatggtaagcaagagtatgaaaaatttgtgagtacaattaggtccgtcccagtaggaaaagcattggcaattcccaattacgaaaatctgagacgcaattggctcgaactatttt-----agaggttgaac-------------------------atat---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-a-actg--------gtgggggta-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP676984.1_UNVERIFIED:_Coxsackievirus_A4_strain_CVA4/FT/CHN/05_genomic_sequence
-----------------tttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgctagcactctgattctgcggaatctttgtgcgcct-g-ttttata-----acccc---t---cccc-c-----aattc-gtaatttagaagt------------aatgcacaccatc-gatcaa-cagcaaacgtggcgcgccagccatgtttaga-tcaagtacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtagcaccatcgaaactgcagagtgtttcgctcagca--ctt-tcccc---gtgtagatcaggtcgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------gggttta-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagttgtcctccggcccctgaatgcggctaatcttaactgccgaccgcataccctcaatcca-ggggg-tggtgcgtcctaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatgttggctgcttatggtgacaattgac-------agattgttaccatatagctattggatcggccatccag--tgtctaacacaacaattgta-----tactta----tttgtt-ggattcggaccac-----tatcata--------------tacatccactaac-accttacactatattataagattgaacacaagaaa-------atgggagcacaagtgtccacacagcgatctgggtctcatgagaccagcaccgtatcgagag-aaggctcaacaataaatttcactaatattaattattacaaggactcttatgcagcctctggtagcaagcaggattattcacaagacccctcaaagttcacccaaccagtcatggacgtgctaaacgaaatggcccccccactgcaatctccaacagctgatgcatgtgggtatagtgatagggttgcccacttaactgtaagaaactctactataacaacacaagaagctgcatatatagtaatgagttatggcgagtggccaaattactgtcctgacacatatgccactgcactaaataaacccaccagacctgatgtttccgtgaataggttttacacattatctactaartcttggacccaaa------------------actcgaaaggctggtactggaaatttcttgatgtctttaatgatgttggagtttttggccagaatgcacagtaccactatctgtataggtcaggattctgtgttcatgtgcaatgtaatgccagtaaatttcatcagggagcactcttagtcgccatggtccccgaattcgtcatcgcttctaagagtaaacgttcaaaacctaataaccccgcacaatatccggctttttcagtgactaacccaggaaagaatgggagagaatttacagacccatatgttttggatgcagggataccattgagtcaagcattgatcttcccgcatcaatggatcaaccttaggaccaacaattgtgctactatcattatgccttacattaacgcagtcccttttgattcagccataaaccataacaattgtgggctggtagtggtgcctgtcgcacccctcaagtatagtgccggtgccaccactgagattccgatcactatcacaatagcccccttaaattcagaattcagtggcctcaggcaagccgtaaagcaaggtatccctgttgagatgaaacccggaaccaatcagtttttgaccacagatgatggagtgtctgcgcccatactacctggatttgaccctactccagtaatacacatccctggggaagttagtagcatacttgaattatgtcaagtggaaactatacttgaagtgaataa----------t------gtgactgatgtacaaggt------gtaagccggttgctcataccagtaaaagctcaggaga------cggtagatacactctgtgcatcattccaagtcgaccctggacgcgacgggccttggcaatcaactttgattgggcaactatgtagatactacactcaatggtcaggttccttagagatcactttcatgtttacgggttcattcatggcaacaggtaagatgcttatagcatacactcctccaggcagtgcacaacccacaacacgtgagttagcaatgctcggcacacacataatctgggattttgggttgcagtcttcagtcactcttgtggtgccctggataagtaacacacactttagaactgtgaaaacagggggatacttagattattatgctacaggtgtggttaccatatggtaccaaacaaacttcgtagtaccaccagatacgccgaacgaagctaatatcatagcaatgggagcagggcaaaagaatttcacgttgaagttgtgcaaggacacacctgaaataactcagcaagccgtgttgcagggtgatgca--------atagccgacgctatac---aaaacacggt--------------------------cacatccgctatacagagggtcaccactaatgttgtcgggcaagat-----gcaacagccgccaacaccgcacctagctcccatagtttgaacactggcctagttcctgccctccaggctgcggagacaggagcttcatctacagctacagatggcaacctgatagagacaagatgtgttgtaaactccaatggcactcgtgaaactcatattgaacatttcttctctaggtcagggctggtgggtgttatggaggtggatgacacaggcactgc----tggaaaggggttctcaaactgggatattgacattatggcgtttgtgcaactgcgccgtaagcttgaggcattcacatatatgcggtttgatgcggaattcaccttcgtcaccaatctagaaaatggactcacgaacaacagtgtgatccaatacatgtatgtacccccaggagctcctaaacctgatgctcgagaatcattccagtggcaaaccgcgaccaatccgtcagttttccagaaaatggacagcccaccaccgcaagtgtcggtgcccttcatgtcaccagccagtgcctaccaatggttctatgatggttatcccacttttggacctcactcagagacgtccaacctatcttatgggcagtgtcctaacaacatgctagggacattctcagctagagttgttagcaagcaaattaccaatcagaagtttcagattcgcatttatttgcggcttaagagagtgagggcatgggtccctagacccttgagatcacaaccatacatctatagaaattaccctacttacggcactac----cattcaacacctggccaaggacagacgtaaaatcac---tgaaactgactacaacgctgag---------------caacgcacgcacggg------------------------------------------aaattcggacaacaatctggagctgtttatgtaggtaattttagagtggtgaatcgccatctagccacacataacgactgggccaacctggtgtgggaagatagctcgagggatctcctcgtgtcgtccacaacagctcagggatgcgacaccattgcccgttgcaactgccagactggagtgtactattgcaactctaaaagaaagcattacccagttagtttttcaaagcctagtttgatctatgtagaggccagcgagtactaccctgccaggtatcaatcacacctgatgcttgcggaaggccactccgaaccaggggactgtgggggtatcctcagatgccagcacggtgttgtcggcatagtgtctactggtggcaacgggctagtcggttttgcagatattagagatcttttgtggttggatgaggaggctatggagcaaggggtgtccgattacattaag-ggacttggagacgctttcggaacaggtttcactgacgcagtctccagggaggttgaagcccttaagaatcaccttatagggtctgaaggagcagttgagaaaatcttgaagaacctagttaaactgatctctgcactagtaattgtaatcaggagtgattacgatatggtcacccttacagcaaccctagctctaataggttgccacggtagtccttgggcttggatcaaagctaaaacagcatctattttaggtattcccattgctcaaaagcagagcgcctcttggcttaagaaattcaatgacatggccaatgctgctaagggtttagaatggatttctaacaaaattagtaaattcatcgattggctcaaggaaaaaattataccagcagccaaggagaaggttgagttcctaaataacttgaaacagttacct-ctactagagaaccagatctcaaatctagagcaatctgctgcttcacaagaagatcttgaggctatgttcgggaatgtgtcgtaccttgccca---------tttctgtcgcaaatttcagccactgtacgctacagaagctaagagagtttacgccctagagaggagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgccttatcatcaggggctcgccaggcacagggaagtctctagcaacgggtatcatcgcccgtgcgatagctgataaatatcactctagtgtgtactcactcccaccagatcttgatcactttgatggctacaagcagcaagtggtcactgtcatggatgacctatgtcaaaaccctgatggtaaggacatgtcactgttttgccaaatggtgtccaccgtcgacttcatcccaccaatggcttcccttgaggagaaaggggtctctttcacatccaaatttgttatggcatccaccaatgctagtaacatcatagtgccaacagtgtctgattgggatgccatccgccgcagattttacatggatcgtgacattgaagtgacagactcatacaaaacagacctaggtagactggatgctgggcgggccgccaaactgtgctctgaaaataacaccgcgaacttcaaacgttgcagccccctagtatgtgggaaggctattcagctcagggacaggaaatctaaagttaggtacagcgtggatactgtggtctctgagttgattagggagtacaataataggtctgctattggtaacacgattgaagctttgtttcagggtccacccaagttcagacccgtaagaatt---agcatggaagagaggccagccccagatgccattagcgacctcctagctagtgtggatagtgaggaagtgcgccagtattgc-agagaccaagggtggatagttccagaaacccctactaatgttgagcgccacctcaatagagcagtgctagttatgcaatcaattgctacagtggtagctgtcgtctcactagtgtatgtcatctacaagctctttgcaggattccagggtgcatattctggtgctcccaagcaggcactcaagaagcctgtcctgcgcacagcaacggtgcaaggtccaagtcttgactttgctctttctctattgaggaggaacattagacaagttcagacggatcaggggcatttcaccatgctgggcgttagagaccgcttggctgttctcccacgacactcgcagcccggaaagacaatctgggtggagcacaagcttgtgaacgtgctggatgctgttgagttagtggatgagcaaggggtcaatttggagttaactttggtcactcttgacaccaatgaaaagttcagagacatcactaaattcatcccagaaagtattagcgctgctagcgacgccactttagtgatcaacacagaacacatgccctccatgtttgtgccagtgggtgatgtcgtgcaatatggtttcctaaatcttagtggaaaaccaacacaccgcaccatgatgtacaatttccccacgaaggcaggtcagtgtggaggagtagttacatcagttggaaaggtcattggtattcacataggaggtaatggcaggcagggcttttgtgcaggactcaagagaagctactttgctagtgaacaaggggaaattcaatgggttaaacctaataaagaaacagggaggcttaacatcaatgggccaacccgcactaagcttgaacctagtgtgttccatgacgtctttgagggcaacaaggaaccagcggtcctacacagtaaggaccctcgccttgaggtggatttcgagcaggcgttgttctctaagtacgtggggaacacaatccatgagcctgatgaatacatcagagaggcagccctccactatgcaaatcagttgaaacagctggacatagacaccacccagatgagcatggaggaggcttgttatggcacagacaaccttgaagctattgaccttcacactagtgcaggttatccttacagtgctctgggaataaagaagagagacatcctggaccctaccactagagacgtgagcaggatgaagttttacatggacaagtatggccttgaccttccatattccacctatgtcaaagacgagcttcgcacgatagacaagattaagaaagggaaatctcgtctgattgaggccagtagtttgaatgattcggtttatctcaggatggctttcgggcacctctatgaaactttccatgcaaaccctgggactgtgactggctcggctgtggggtgcaatccagatgtgttttggagcaagctaccaattctgctccctggttccctctttgctttcgactattcaggctacgatgctagcctcagtccagtttggtttagagcactggaattagtccttagggagataggctatagtgaggaggcggtctcgctcattgaagggattaaccacacgcaccacgtatatcgcaacaaaacttattgcgtacttggtgggatgccctcgggttgttcaggaacatccatcttcaattcaatgatcaataatattatcatcagggcattactcatcaagacattcaagggcatcgatttagatgaactcaacatggttgcctacggggacgatgtacttgctagttaccctttcccaattgactgcctagagttagcaaaaataggtaaggagtatggtctgaccatgacccctgcagataagtccccgtgctttaatgaagttaattgggaaaatgcaacctttctcaagaggggtttcctgcctgatgatcaatttccattcttgattcaccctaccatgccaatgaaggagattcacgagtccattcgatggaccaaggatgcgcgtaacactcaagatcacgtgcgatccctgtgcctgttggcgtggcacaacggtaagcaagagtatgaaaaatttgtgagcacaattaggtctgtcccagtaggaaaagcattggcaattcccaattacgagaatttaagacgcaattggctcgaattatttt-----agaggtcaaat-------------------------acac---------------ctcaaccc-ccccagag----atctggt------c-g-----tgaacat-a-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagccaaaaa-----------------------------------------------------------------------------aaaaaaaa----aaaa------------------aaaaaaa-------------------------------------------------------------aaaaaa---------------------------------
>KP289442.1_Coxsackievirus_A4_isolate_CV-A4/P1033/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacttgca-gggcccac-t-gggcgctagcactctgattctgcgggatctttgtgcgcct-g-ttttata-----acccc---a---ccc--c-----tactc-gtaacttagaagt------------aacacacaccatt-gatcaa-cagcaagcgtggcgcaccagccacgtttaga-tcaagcacttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgaaggagaaatcgttcgttacccggctaactacttcgagaaacc-tagtagcaccattgaaactgcagagtgtttcgttcagca--ctt-tcccc---gtgtagatcaggccgatgagtcactgca-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------gggcttt-cccataggacgctctaatgtggacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcataccctcaatcca-ggggg-tggtgcgtcgtaacgggcaactttgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------aaattgttaccatatagctattggattggccatccag--tgtctaacagagcagttgta-----tactta----tttgct-ggattcgttccac-----tatcata--------------cacatctattaat-accttatattatattataagattgaacgcaaggaa-------atgggagcgcaagtgtccacgcagcgatctggatctcatgagaccagcactgtagcgaggg-aaggctctacaataaatttcaccaatattaattattacaaggactcctatgcagcctctggtagtaagcaggattactcacaagatccttcgaagttcacccaaccagtcatggacgtgttaaaggaaatggcccccccactacaatctccatcagctgaagcgtgcgggtatagtgatagggttgcccaattaactgtgggaaattccaccataacaacacaagaagctgcaaatatagtagtgggttatggcgaatggccaaattactgccctgacacagatgccactgcggtagacaaacccaccagacctgatgtttccgtaaataggttctacacattatctactaagtcttggacccaaa------------------actcgaaaggctggtactggaaattccctgatgtccttaatgatgtgggagtcttcggccagaatgcacagtaccactatctgtatagatcaggattttgtgttcacgtgcaatgtaatgccagtaaatttcatcagggagcactcttagtcgccatgatccccgagtttgtcatcgcttctaagagtgagcgttcaaaacccaatgaccccgcacaatacccggctttttcagtgactaacccaggaaagaatgggagagaatttacagacccatatgttttggatgcagggataccattgagccaagcattgatcttcccacatcagtggatcaaccttaggaccaacaattgtgccactatcattatgccttacattaacgcagtcccttttgattcagctataaaccataataattgtgggctggtagtggtgcctgtggcacctctcaagtatagcgccggcgccaccactgagatcccgatcactatcacaatagcccccttgaattcggagttcagcggtcttaggcaagccgtgaaacaaggtattcctgttgagatgaagcctggaaccaatcagtttttgaccacagatgatggagtgtctgcgcccatattacctggatttgaccccactccagtaatacatatccctggagaagttagtagcatacttgaattatgtcaagtggaaactatacttgaagtgaataa----------t------gtgactgatgtacaaggt------gtaagccggttgcttataccggtgaaggctcaggaga------cagtggatacactctgtgcgtcattccaggtcgaccctggacgcgacgggccttggcaatcaactttgattggacaattatgtaggtattacactcagtggtcaggttccttagagatcactttcatgtttacgggttcatttatggcaacaggtaagatgctcatagcatacactcctccgggcagtgcacaacctacaacacgtgaactagcgatgctcggcacacatataatctgggattttggattacagtcttcagtcactcttgtggtgccctggataagtaacacacacttcagaactgtgaaaacaggggggtacttagattattatgctacaggtgtggttactatatggtaccagacaaactttgtagttccacccgatacgccaaatgaagctaacatcatagcaatgggagcagggcaaaagaatttcacgttaaagttgtgcaaagatacacctgagataacccagcaagccgtgttgcagggtgatgca--------atagccgacgctatac---aaaacacggt--------------------------cacatctaccatacagagggttaccactaatgttgtcgggcaagat-----gcaacagccgccaacaccgcacctagttcccatagtttgaacactggtctagtccctgcccttcaggccgcggagacaggagcttcatctacagctacagatggcaacttgatagagacaagatgtgtcgtaaactccaatggcacacgtgaaacccatattgaacacttcttctctaggtcaggactggtgggtgttatggaggtggatgatacaggcactgc----tgggaaggggttctcaaactgggatattgacattatggcatttgtgcaactgcgccgtaagcttgaggcattcacatatatgcggtttgatgcggaattcaccttcgtcaccaatctagaaaatgggctcacgaacaacagtgtgatccaatacatgtacgtacctccgggggctcctaaacctgatgctcgagaatcattccagtggcaaactgcaactaatccgtcagtttttcaaaaaatggacagcccaccaccgcaagtgtcggtgcccttcatgtcaccagctagtgcctaccaatggttctatgatggttaccccacttttgggcctcactcagagacatctaacctatcatacggtcagtgtcctaacaacatgttagggacattctcagctagagttgttagtaagcaaattaccagccaaaagtttcagattcgcatttatttgcggcttaagagagtgagggcatgggtccctagacccttgagatcacaaccatacatctacagaaattaccctacttatggcactac----cattcaacacctggccaaggatagacgcaaaatcac---tgaaactgactacaacgctgag---------------caacgcacgcacggg------------------------------------------aaattcggtcaacaatctggagctgtttatgtgggaaactttagagtggtgaatcgccatttagccacacacaacgactgggccaatctggtgtgggaagatagctcaagggatctcctcgtgtcgtccacaacagcccaagggtgcgacactattgcccgttgcaattgccagactggagtatattattgcaactctagaagaaagcattacccagttagtttttcaaaacctagtttgatttatgtggaggccagtgagtactatcctgctaggtatcaatcacacctaatgctcgcggcaggccactctgaaccaggggattgtgggggtatcctccgatgccaacacggtgttgtcggcatagtgtccactggtggtaacggactagtcggttttgcggacatcagggaccttctgtggttggatgaagaagcaatggagcaaggagtctctgattacatcaaa-gggcttggtgatgcatttggaactggtttcaccgatgcagtttccagggaagtggagtctctcaagaattatcttattggttctgaaggggctgttgaaaagatccttaagaacttaatcaagttgatctctgctctagtcattgtgattaggagtgattatgacatggtcaccctcactgcaactctagccttaattgggtgccacggtagtccctgggcttggatcaaggcgaagacagcatctattttaggcatccccatcgcccagaagcaaagcgcatcctggcttaagaagttcaacgacagggccaacgctgctaaggggctggaatggatttccaacaaaatcagcaaatttatcgactggcttaaagagaagattgtaccagcggctaaagagaaagttgagttcctaaataatctgaaacagttgcca-ctcctggaaaatcaaatctcaaatctagaacaatctgctgcctcacaggaggatcttgaagccatgtttggaaatgtgtcgtacttagccca---------cttttgtcgcaagtttcaaccactgtacgccacagaggctaaaagagtctatgctttggagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgcctcatcatcagaggatctccgggaactggaaagtcattagcgactggcatcattgctcgggcaatagctgataagtaccattctagtgtatattctctaccgccggacccagaccactttgatgggtataaacaacaagtagtcacagttatggatgacttgtgccaaaaccctgatggcaaggatatgtcactgttttgccagatggtgtctactgtagacttcatcccaccaatggcttccctggaagaaaaaggagtctctttcacatctaaattcgttattgcatccaccaatgccagtaacattatagtaccaacagtgtctgactcagacgccattcgtcgtagattctatatggactgcgacattgaggtcacagattcatataagacagaccttggtagactagatgcaggtcgagctgctaggctatgctcagagaacaatacagcaaactttaaacgctgcagcccgctagtatgtggcaaagccatccaactgagagacaggaaatccaaggttaggtacagtgtggatacagtggtctcagaactcataagggaatacaacaataggtctgccattggaaatacaattgaagcactgtttcaggggccacccaagtttaggcctattagaatc---agcctagaggagaagccagccccagatgctatcagtgaccttcttgccagtgtggatagcgaagaggtgcgccaatactgt-agagatcaaggttggatcatcccggaaactcctaccaatattgagcggcatctcaacagggctgtattaatcatgcaatccattgctacagtggtggcagttgtctcattggtgtatgttatctacaagctctttgctggtttccagggcgcatattcaggtgcgcctaagcaggtccttaagaaacccatccttcgcacagcaacagtgcaaggtccgagtcttgattttgctttgtccctactgaggagaaatatcagacaagttcagacagatcaaggacattttaccatgctaggagtcagggaccgcttggccgtccttccacgacactcgcagcctggaaaaacaatttgggtggagcacaagctcgtgaacatcttggatgctgttgagttggtggatgagcaaggagtcaatttagagctcaccctggtcactctcgacactaatgaaaaattcagagacatcaccaaatttatcccagagaacattagtgctgccagtgacgccactctggtgatcaatacagagcatatgccttcaatgttcgttccagtgggtgatgttatgcagtatggttttctaaaccttagtggaaagcctactcaccgtaccatgatgtacaacttccctactaaagcaggacagtgtggaggggtggtgacatcagttggaaaggtcatcggtatccacatagggggcaatggtagacaaggcttctgcgcgggacttaaaagaagttacttcgccagtgagcaaggagagatccaatgggtgaagcctaacaaggagactggaagactcaacattaatggtccgacccgcactaagcttgaacccagcgtattccatgatgtgtttgagggcaacaaagaaccagcagtcttgcacagcaaagatcctcgccttgaagtggattttgagcaggcactgttctccaaatacgtggggaacacgctacatgagcctgatgagtacatcagagaggctgccttacattatgcaaatcagttgaagcagctagatatagatacttctcaaatgagcatggaggaagcttgttatggtacagactaccttgaggccattgaccttcacacaagcgcaggttacccttacagtgccttgggaatcaaaaagagagatattttggaccctaccactagggatgtgagtaagatgaaattttacatggacaagtatggccttgacctcccttactctacctatgttaaggatgagctacgctcaatggacaagatcaggaagggaaagtcccgcttaattgaagctagtagcttgaatgactcagtttaccttagaatggcctttgggcacctctatgaaattttccatgcaaatcctgggactgtaactggttcggcagtagggtgtaacccagatgtgttttggagtaagctgccaatcctgcttcctggttccctcttcgctttcgactactcgggctacgatgccagtctcagcccagtctggttcagagcactagagctggtcctcagagaaataggctacagtgagaaagcagtttcactcattgagggaatcaaccatacgcaccatgtgtaccgtaataaaacctattgtgtacttggtgggatgccctcaggctgctcaggcacatccattttcaactcaatgattaacaacatcatcatcagagcattgcttatcagaacatttaagggtattgatttggatgaacttaacatggttgcctacggggatgatgtgcttgctagctacccatttccgattgactgcctagaactagcaaaaacaggcaaagagtatggtctaaccatgacacctgcagacaagtctccctgctttaatgaagttaattgggagaacgcaaccttcctcaaaagaggctttttgcctgacgaacaattcccattcttgattcacccaaccatgccaatgaaggagattcatgagtcaatccggtggaccaaagatgcacgcaacacacaagatcatgtgcgatccttatgcttgttggcgtggcacaacggtaagcaagaatatgagaagtttgtgagcacaattagatctgtcccagtgggaaaggcattagcaattccaaactatgaaaatctgaggcgcaattggctcgaattgtttt-----agaggttgagc-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----cgagcat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagcaaaaaa-----------------------------------------------------------------------------aaaaaaaa----aa-------------------------------------------------------------------------------------------------------------------------------
>AY421762.1_Human_coxsackievirus_A4_strain_High_Point_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-c-tcccacccaca-gggcccac-t-gggcgctagcacactgattttacggaatctttgtgcgcct-g-ttttata-----tcccc---t---cccc-c-----aaaca-gtaatttagaagt------------ttaatgcatttat-ggccag-tagcgggcatgacgcaccagtcatgtcttgg-tcaagcacttctg-ttttcccggactgagtatcaataaactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-cagtaacaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgta-aaccccacgggcgaccgtgacagtggctgcgttggcggcctgcccat--------gggacaa-cccatgggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacaccctcaatcca-ggggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttattgtggctgcttatggtgacaattaaa-------gaattgttaccatatagctattggattggccatccgg--tgtctaacagagcaattgtg-----tattta----tttgct-ggatttgttccat-----tatcata--------------cacatcttttaat-actttatactttattataaaattgaacacaagaaa-------atgggagcgcaagtttccacgcagcggtcggggtcccatgagaccagcactgtagcgagag-aaggctcaacgataaactttactaatattaattactataaggattcttatgcagcctctggtagcaagcaggattatacacaagacccctcgaaattcacccaaccagtcatggatgtcttgaaggaaatggcccctccactacaatctccatcagctgaagcatgtgggtacagtgacagggttgctcaattaaccgtagggaactccactataacaacacaagaagctgcaaatatagtagtgggctacggtgaatggccaaactactgtcccgacacagacgctactgcagtggacaaacccaccagacccgatgtctctgtgaataggttttatacattgtctaccaaatcttggacccaga------------------attctaaaggttggtattggaaattccccgatgtccttaatgacgttggggtttttgggcagaatgcacagtatcactacctatacaggtcaggattttgcgttcatgtgcaatgtaatgccagcaaattccaccagggagcactgttagtcgctatggtccctgaatttgtcattgcctccaagagtgagcgctcaaagcctaacaaccctgcgcaatacccagccttctcagtgaccaacccaggaaagaatggaagagaatttgtagacccttatgttttagacgctgggataccactgagtcaagcgttaatattcccccatcaatggatcaaccttaggactaacaactgtgctaccattatcatgccttacatcaatgcagtcccttttgattctgccataaaccacaacaattgcgggttggtggtagtgcccgtggcaccacttaagtacagtgccggtgccaccactgagatcccgatcaccatcacaatagcccctctgaactctgagtttagcggccttaggcaagctgtaaaacagggcatcccagttgagatgaagcctggaaccaaccagtttctaaccacagacgacggagtatctgcacccatactgcctggatttgaccccactccgacaatacacatccccggagaagtcagtagcatacttgagttgtgtcaagtggaaactatacttgaggtaaacaa----------t------gtgactgatgtgcaaggc------gtgaaccggttgcttataccagtgaaagctcaggaga------cagtggacacgctctgtgcctcattccaggttgatcctggtcgtgatggaccttggcaatccactctaatcggtcagctgtgtagatattacacccaatggtcgggctctctggagatcacatttatgtttacaggatcattcatggcaacaggtaagatgctcatagcatacacccctccgggcagtgcacaacctacaactcgtgagttggcaatgctcggtacgcacataatctgggactttggattacagtcttcagtcacccttgttgtaccctggataagtaacactcactttagaactgtgaagacagggggctacctagattattatgccacaggtgtagtcaccatatggtatcagacaaatttcgtggtaccaccagacacgccgaatgaagctaatattatagcaatgggggcagggcaaaagaatttcacgctgaagctgtgcaaggacacgcctgagataacccagcaagctgtgttgcagggtgatgca--------atcgctgatgctatac---aaaacacagt--------------------------tacatctactatacagagagtcacaaccaacactgttgggcaagat-----gcaacagctgctaacacagcacccagctctcatagtttgaacactggcctagtccccgcgcttcaagctgctgagacaggagcttcatccacagccacggatgggaatttgattgagactagatgtgttgtaaactccaatggtacacgtgaaacccacattgagcatttcttctctaggtcagggctggtgggagttatggaggtagatgatacgggtactag----tggcaagggattctcaaactgggacattgacatcatggcgtttgtgcaactgcgccgtaaactcgaggcatttacatatatgcggttcgacgcagagtttacctttgtcaccaatttggagaacgggctcacgaataatagtgtgatacagtacatgtatgtaccacctggagcgcctaaacccgatgcccgggaatcattccagtggcaaactgcaaccaatccgtcagtctttcaaaaaatggacagtccgccacctcaagtttcagtacccttcatgtcaccagccagtgcctatcaatggttctatgacggttaccccacctttgggccccactcggagacatctaatctatcttacgggcaatgtcccaataatatgctgggaacattctcggccagggttgttagcaagcaaatcaccaatcagaaattccagatccgtatttatctacggctgaagagggtgagggcgtggatccccagacctttgagatcgcagccgtacatttacagaaactaccccacctatggtactac----catccaatacctggccaaagataggcgcaagatcac---tgaaactgattataatgctgaa---------------cagcgcacgcatggg------------------------------------------aaattcggccaacaatccggagctatctacgtggggaattttagggtagtgaaccgccatctcgccactcacaatgattgggcaaatcttgtctgggaagatagtgctcgcgacctacttgtgtcatccaccaccgctcaaggctgtgatacaattgcccgctgtaattgccaaacaggggtgtactattgtaactcaaggagaaaacactacccagttagtttctcaaaacccagcctcgtttttgtggaggctagtgagtactatccagccaggtatcaatcacatcttatgcttgcagaaggtcactctgaacctggagattgtggaggtatcctcagatgtcaacatggtgttgttggtatagtgtccactggtggcaatgggttagtcggatttgctgacatcagggatcttttgtggttggacgaggaagcaatggagcagggagtgtctgattacatcaag-ggactcggtgatgcatttggaacgggtttcactgatgcagtttccagagaggttgaggccctcaagaatcacctcatgggatctgaaggggcggttgagaagattctaaaaaaccttattaagctgatctctgcgctggtaattgtaattaggagtgattatgatatggttactctcacagcaactttagctctaattggctgtcacggcagcccgtgggcctggattaaggctaagacagcgtccattctaggtatccccattgctcaaaaacaaagcgcgtcctggctcaagaaattcaatgacatggccaatgctgccaaggggttggaatggatatccaataaaatcagcaaattcattgactggctcaaggagaagattgtgccagcagctaaagagaaggtagaatttctgaataatctgaagcaactacca-ctgttagagaatcagatctcaaacctggaacagtctgccgcctcgcaagaggaccttgaagcaatgtttgggaatgtgtcgtatctcgccca---------tttctgccgcaaattccagccactgtacgctacagaggccaagagagtctacaccctagagaaaaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggctctccaggtactggaaagtctttggcgactagcattgttgcccgggcaatagctgacaagtaccactccagtgtgtattcactcccaccagacccagatcacttcgacgggtacaagcagcaagtagttacggttatggatgacttatgtcagaatcccgatggtaaagacatgtcattattttgtcaaatggtgtccactgtagacttcattccaccaatggcttctttagaagaaaaaggagtttcctttacatccaagtttgtcattgcgtctaccaatgccagtaacatcatagtgccaacagtatccgattctgatgccattcgccgcagattttacatggattgtgatatagaagtaacagattcatacaaaacagatttgggcagattggacgctggacgagccgccagattgtgttccgagaataacactgcaaattttaagcgctgcagcccactagtgtgtggaaaagccattcaacttagagacagaaaatctaaagtcagatatagtgtggacacagtggtctctgaacttattagagaacacaataatagatccgctataggcaacacaattgaagctctgtttcagggcccacccaagttcagacccatcaggatt---agtcttgaggagaagccagccccagatgccatcagtgatctccttgccagtgtggatagcgaggaagtgcgccaatactgc-agagaccaaggttggatcatcccagaaactcccactaatgtcgagcgccacctcaatagggcggtactggttatgcagtccatcgctactgtagtggcagttgtctcgctggtgtatgttatctacaagctgtttgcagggttccaaggtgcatactctggtgcccctaagcaagcactcaagaaacctgttcttcgcacagcgacagtacaaggtccaagtctcgactttgctctctcactgctgaggaggaacatcaggcaagttcagacagatcaagggcacttcactatgctaggtgtcagagaccgcttggccgtcctcccgcgacactcgcaacctggaaagacaatctgggtggagcacaaacttgtaaacatcctggatgctgttgagttggtggatgaacaaggagttaacttagaactgaccctgatcactcttgataccaatgagaagtttagagatatcaccaaatttattccagaaaacattagtgctgctaatgacgccactctagtgatcaatacagagcacatgccttctatgttcgtgccagtgggtgacgtcgtgcagtacggatttctgaatcttagcgggaagcccactcaccgcactatgatgtacaacttccctactaaagcgggacaatgtggaggggtagtgacatctgttggaaaggtcattggtatacacattggtggtaacggcaggcaaggtttttgtgcaggacttaagaggagctactttgccagcgagcaaggagagattcagtgggtcaaacctaataaagagactggaaggctcaacatcaatggaccaacccacaccaagctcgagcctagtgtatttcatgatgtcttcgagggagacaaagaaccagctgttttgcatagcaaggatccacgccttgaagtggactttgagcaggctctattctccaagtatgtggggaatacattacacgagcctgatgagtacattagagaagcagctcttcactatgcaaatcaattgaaacaactagacatcaatacttcccaaatgagtatggaagaagcttgctatggcactgagaacctagaagccattgatctccataccagtgcaggttacccctacagtgccctgggaataaaaaagagagacatcctagaccccaccaccagagatgtgagtaagatgaagttctacatggataagtatggtctcgatctcccttattccacctacgtcaaggatgagcttcgctcggtggataagatcaagaaagggaaatcccgcctaatcgaggctagtagcttgaatgactcagtgtacctcaggatggtttttggccacctatatgaaaccttccacgcgaaccctgggactgtaactggttcagccgtggggtgcaacccggatacattctggagtaagctaccaatcctgctacctggctcactcttcgcttttgattattcaggctatgatgctagtctcagccctgtctggttcagggcactggagctagtcctcagggagataggctatagtgaggaggcggtttcactcattgaggggatcaatcatacacaccatgtgtaccgcaacaaaacctactgtgtgcttggtggaatgccttcaggctgctcaggaacatccattttcaattcgatgatcaacaacatcattattagggcactactcataaaaacattcaggggtattgatttagatgagctcaacatggttgcctacggggatgatgtgcttgctagttatcctttcccaattgactgtctggaattggcaagaacgggtaaggagtatggtttgactatgactcctgcagacaaatccccttgttttaatgaggtgaactgggagaatgcaaccttcctcaaaagaggcttcctacccgatgagcagttcccattcttgatccatcccaccatgccaatgaaggagatccatgaatctattcgatggaccaaggatgcacggaatactcaagaccacgtgcgatccctgtgtcttttggcatggcacaatggcaaacaagaatatgaaaaatttgtgagtacaattaggtccgtcccagtgggaaaagcattggcaattccaaattatgaaaatctgagacgcaattggctcgaactatttt-----agaggttaaac-------------------------gcac---------------ctcaaccc-caccagag----atctggt------c-g-----tgtatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ746659.1_Human_coxsackievirus_A16_isolate_CV-A16-genotypeA_complete_genome
--------------------------------t-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcactctgattctacggaatccttgtgcgcct-g-ttttatg-----tccct---t---cccc-c------aatcagtaacttagaagc------------attgcacctctttcgaccgt-tagcaggcgtggcgcaccagccatgtcttgg-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgagggagaaaacgtccgttacccggctaactacttcgagaagcc-tagtagcaccatgaaagttgcagagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgcg-atccccacgggcgaccgtggcagtggctgcgttggcggcctgcctgt--------ggggtaa-cccacaggacgctctaatatggacatggtgca-aagagtctattgagctagttagtactcctccggcccctgaatgcggctaatcctaactgcggagcacataccctcgaccca-ggggg-cagtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatactggctgcttatggtgacaattgaa-------agattgttaccatatagctattggattggccatccgg--tgtgcaacagagctattatt-----taccta----tttgtt-gggtatataccac-----tcacatcc-----------agaaaaaccctcgac-acactagtatacattctttacttgaattctagaaa-------atggggtcacaagtctcaacccaacgatcgggttcccacgaaaattcgaactcagcatcag-aaggatctactataaactacaccaccattaactattacaaggatgcatatgctgccagcgcgggtcgccaagatatgtctcaggaccctaagaaatttacagaccctgtgatggatgtcatacacgagatggctcctcccttgaaatcacccagtgctgaagcttgtggttatagtgatcgagttgcccaactcacaattggaaactccacaatcactacacaagaagctgcaaacattataatagcatatggggaatggcccgagtattgcaaggacgctgatgccacagctgttgacaagcccaccagacccgatgtgtcggtaaataggttcttcacccttgatactaaatcgtgggctaaag------------------actcgaagggatggtactggaaattcccggacgttttgacggaggtgggcgtgtttgggcagaatgcgcaattccattatctgtatagatccggattctgtgtgcacgtgcagtgcaatgccagcaaattccaccagggtgctctcttggttgccatactgcctgagtacgtgctgggcacca------ttgccgggggcgatggtaccgagaactcacatcccccgtacttcatcacccagccaggacaggtgggtgctgtacttacaaatccttatgttttggatgctggggtaccccttagtcaattgacggtgtgtccgcatcagtggattaacctacgaaccaacaactgtgcgaccatcatagtaccatacatgaatactgtaccattcgattcggccctaaaccattgcaactttggcttaattgtagtgcccgtagtaccactcgactttaacgctggagctacatcagaaataccaataactgtcaccatcgcacccatgtgcgctgaatttgcaggcttgcgacaggcaatcaaacaggggatacctaccgagttgaagcccggtactaatcagtttctcactactgatgatggtgtctcagctcccattttgcccggattctaccctactccagccatacacatacctggtgaagtgcgcaatctgttggagatttgcagggtagagaccatattggaggtgaacaa----------tctacagagtaatgagacaaccccc------atgcaacgactatgcttccctgtctcggtgcagagta------agacgggggaattgtgtgctgtttttagggccgaccctggtaggaatggaccgtggcagtcgactattttaggacagttgtgtaggtactatactcaatggtctggatctctggaagtcactttcatgtttgctggatcgttcatggccacaggaaagatgctaatcgcatacacacctccggggggtggggtcccagcagatcggctcactgcaatgctgggaacccatgtgatatgggattttggcctccaatcctcagtcacgctagttataccatggataagcaacacacactatagggcgcacgccagggacggttattttgattattacaccactggcacgatcactatatggtatcagacaaattatgtcgtacctattggagcccccacaacagcctatattgtggccctcgcagccgctcaggacaactttaccatgaaactgtgcaaagacactgaggatgttgagcaatctgcaaacatccagggtgatgga--------attgcagacatgattgaccaggctgtcacttcccgagttggtcgtgcgc------tgacatccttacaggtagaacct-------------------------------accgccgccaacaccaatgctagtgagcacagattgggcaccgggctcgtccccgccttgcaggctgcagagaccggcgcctcttctaatgcacaggatgagaatcttatagaaacccggtgtgtgttgaaccatcactccactcaagagaccacgattggcaactttttcagtcgagcaggactagtgagtattattaccatgcccaccacaggtacccg-agacaccgatgggtatgtgaactgggatattgacttgatgggttatgctcaaatgaggcgtaagtgtgagctattcacatacatgcgctttgatgcagagtttacatttgtagctgccaaaccaaacggtcagctagtaccacaattgttgcagtacatgtatgtgcctcccggagctccaaaacctacgtcccgggattcctttgcctggcagactgctaccaatccttccatcttcgtcaagttgactgaccccccggcacaagtgtcagtacccttcatgtctcccgccagcgcctaccagtggttttacgatggctatccaacgtttggagcccatccacaatcgaatgacgcagactatggccaatgtccaaacaacatgatgggcacctttagcatcagaactgtaggcactgagaaatccccccattctatcacccttcgggtgtatatgaggatcaagcatgtcagggcctggataccccggccactcagaaaccaaccgtacctttttaagacaaatccaaattataaaggcaa----cgacatcaaatgcaccagcacaagtagggacaaaat---aacaac---------------------------------------actagga------------------------------------------aaatttggccagcaatctggtgctatttacgtgggtaactatagagtggtcaatcgtcacttggccacgcacaatgactgggccaatttagtatgggaagacagctcaagggatcttttagtctcctccaccactgcacagggatgtgacactattgctcgatgcgattgtcaaacgggggtgtattattgcagctcaagaagaaagcactacccagtcagtttctcaaagcccagtctaatctttgtggaagctagtgagtactacccagccaggtaccaatcgcacctcatgctcgctgtagggcattccgagcctggagattgcggaggtgttctcaggtgccagcatggtgttgttggtatagtgtctacaggtggaaatgggcttgttggttttgctgatgttagagacctcctgtggctggatgaagaggctatggaacaaggagtgtctgattacatcaaa-gggcttggtgatgcgtttgggacaggtttcactgacgctgtttccagagaggttgaggctcttaaaaatcacctcataggatctgagggtgcagttgagaagattcttaaaaacttaattaagctcatttctgcactagtgattgtgatcaggagtgattacgatatggtcactctcacagcaactctggctctaattgggtgtcatggcagcccttgggcttggatcaaggctaagacagcatctattctgggcatccccattgctcagaaacagagcgcatcatggctaaaaaaattcaacgacatggctaatgctgccaaagggctagaatggatatctaataaaattagtaagttcattgattggctcaaggagaagattataccagcagctaaggaaaaggttgaattcttgaacaacctgaaacagctacca-ttattagagaaccagatctcaaacctagaacaatctgctgcttcacaagaggaccttgaagcaatgtttggaaatgtgtcataccttgccca---------tttctgccgcaaatttcagccactgtacgctacagaagccaagagggtctacgccctggagaaaaggatgaataactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcaggggctcaccaggtactgggaaatctttggcaaccggtatcattgcccgggcaatagccgacaagtaccactccagtgtgtattcacttcccccagacccagatcactttgatgggtacaaacagcaagtagttacagttatggatgatttgtgtcaaaatcctgatggtaaggatatgtcattattttgtcaaatggtatccactgtggactttatcccaccaatggcctccctagaagaaaaaggagtttctttcacatccaaattcgtcattgcgtccaccaatgccagcaacatcatagtgccaacggtgtccgactctgatgccatccgccgcagattctatatggactgtgacattgaggtgacagactcatacaagacagatttgggcagattggatgcaggacgggccgccagattatgttctgagaacaacactgcaaacttcaagcgctgcagcccactggtgtgtgggaaagccattcaactcagagagaggaaatccaaggtcagatacagtgtggacacgatggtctccgaactcattagagagtacaataacagatatgctattggtaatacaatcgaagccttgttccagggtccacctaagtttaggcccattagaatc---agtcttgaggaaaagccagccccagatgccattagtgatctcctcgctagtgtggacagtgaggaagtgcgtcaatactgc-agagaccaaggctggatcatcccagaaactcccaccaatgtcgagcggcaccttaatagggcggtgttgatcatgcagtccattgccactgtggtagcagttgtttcgctggtgtatgttatctacaaattgtttgcagggttccaaggtgcatactctggtgcccctaagcaaacactcaagaaacctatactccgcacagcgacagtgcaaggcccaagtcttgattttgctctctcattgcttaggaggaacatcagacaagtccagacagaccaaggccacttcactatgctaggtgttagagatcgcttggctgtcctcccgcgacactcgcagcctgggaggacaatatgggtagaacacaagcttataaacatcttagatgctgttgagttggtggatgaacaaggggtcaacttagaactgaccctggttactcttgataccaatgagaagttcagagacatcaccaagttcatcccagaaaacattagcgctgccagtgatgccaccctagtgatcaacacagagcacatgccctccatgttcgtgccagtgggtgacgttgtgcaatacggtttcctaaacctcagcggaaaacccacccatcgtaccatgatgtacaactttcccactaaggctggacaatgtggtggagtggtgacatctgttggaaaggttatcggcatacatattggtggcaatggcaggcagggcttttgtgcaggactcaagaggagttattttgccagtgagcaaggagagatccagtgggtcaagcccaataaagagacaggcagactcaacatcaatgggccgactcgcactaagctcgaacccagtgtgttccatgatgtctttgaggggaacaaagaaccagcagtcttgcatagcagagacccacgccttgaagtggactttgagcaggctttattctccaagtatgtagggaacacactgcatgagcctgacgagtacatcaaagaggcggccctccactatgcaaatcagttgaagcaactggacatcaacacttctcaaatgagtatggaggaagcttgctatggtactgagaaccttgaggccattgatctccacaccagcgcgggctacccctacagtgctctgggaataaagaagagagatattttagatcccactaccagagatgtgagtaagatgaaattctatatggacaagtatggccttgaccttccttactctacctatgtcaaggatgagctccgctcgatagataagattaagaaaggaaaatcccgcctgatcgaggctagtagtctaaatgactcagtgtacctcagaatggcctttggtcacttgtacgagactttccacgcaaatccaggaatcataactggctcagctgtgggatgcaacccggatacattctggagtaaactaccaatcctgcttccaggttcactctttgcatttgattactcaggctatgatgctagtctcagcccagtctggtttagagcactggagctggtcctcagggaggtgggctatagtgaggaggcagtctcccttatagaggggattaaccatacacaccatgtataccgcaataaaacttactgtgtacttggtggaatgccctcaggctgttcaggaacatccattttcaactcaatgatcaacaacatcataattaggacattgctcataaaaacattcaagggcattgatttggacgagcttaacatggtcgcctacggggatgatgtgcttgctagttatcctttcccaatcgattgcctggaattggcaagaacaggcaaagagtatggtttgactatgactcctgcagacaaatctccttgcttcaatgaggtaaattggggcaatgcaacctttcttaaaagaggcttcttgcccgatgagcaattccctttcttgatccatcctaccatgccaatgaaggagattcacgaatctattcgatggaccaaggacgcacgaaacactcaagatcacgtacgatccctgtgtcttttggcgtggcacaatggtaagcaggagtatgaaaaatttgtgagcacaattaggtctgtcccagtaggaaaagctttggctataccgaattatgaaaatctgagacgcaattggctcgaattatttt-----agaggtcagac-------------------------atac---------------ctcaaccc-caccaggg----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-ta----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP036482.1_Coxsackievirus_A14_isolate_PZ05Y/JS/2012_complete_genome
----------------tttaaaac--aag-ctc-tggggttg-t-acccacccaca-gggcccac-t-gggcgctagcactcttattctacggaatatttgtgcgcct-g-ttttata-----gccct---c---cccc--------attaagtaacttagaagt------------gatgtgcagcaca-gatcaa-tagcaggcatagcgcaccagctgtgtcttga-tcaagcactcctg-tttccccggactgagtatcaataaactgc-tcacgcggttgaaggagaaaacgttcgttacccggctaaccacttcgagaaact-tagtaacaccattgaagctgtagagtgtttcgctcagca--ctt-cccca---gtgtagatcaggctgatgagtcactgcg-accctcacgggcgaccgtggcagtggctgcgttggcggcctgcctat--------ggggcaa-cccataggacgctctaaagtggacatggtgtg-aagagtctattgagctggttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcatgccctcaaacca-ggggg-tggtgcgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcatattggctgcttatggtgacaattgaa-------gaattgttaccatatagctattggattggccatccgg--tgtgtaacagagcgattatc-----ttctct----tttatt-gcctttgtcccat-----tgacccc--------------aactgcgttaaac-actctgcaatatatactctatcttaactctaggaagc-gaacatgggagctcaagtatcaacacagcggacgggttcacacgagaccaccaacaccgtccgtg-atgggtccaccctgaacttcaccaacattaactattacagggaatcgtacgctgcggcagcaaatagacatgatatggcccaagatccttccaaattcaccaagcctgttttggacatactcacagaagcagcagccccccttcaatcgcctactgccgaagcgtgtggttatagcgatagagtggcacagctcactataggcaattctactataacaacgcaagaggctgcaaatgtgattgtagcatatggggaatggccagaatattgtaatgacaccgatgctactgcagttgataaacctacaagaccagatgtgtcagtaaatagattctacactttagatactaaagattgggaggcca------------------gttctaaagggtggtactggaaattcccagatgtgttagcaatgacaggtgtctttggacaaaacgcgcagtatcactacttgtatagatcaggtttttgcattcacgtgcaatgcaatgctagtaaatttcaccaaggcgcacttctcgtggccatagtgccggagtatgttactggcacag------ttgctggtaacaccggtaatgaacacacacaccccccatacgccaccacgcagccaggattggatggattccctctatccaacccatatgtgttggatgctggtatacccattagtcagctattgatatgcccccaccagtggatcaatcttaggaccaacaattgtgccaccctcattgtgccctatatcaacacagtgcctttcgattccgccctcaaccattgtaatttcggcttagttgtgatcccggtatcaccattggcctatgcatcttcagcaaccaccacaataccgataactattacagtggcgccaatgtgctcagaatttgcaggcctcaggcaggccgtgcaacagggcatcccggcagaacttagaccgggcactaatcagtttcttaccactgaagatggtacttctgcccctatattacccgggtttcacccaactcaggttatccatataccaggagaagttagaaatcttctcgaattatgtcaagtagagacaatgttagaagttaacaa----------cttaaagtcaaatgagagtgatcca------atgcaacgtcttctagtcccagttcaatctcagagtg------agaaggggaagttgtgtgccgtcttccgagcagacccgggacttgatggaccatggcagtcaacattattagggcagctgtgcaggtactacacacaatggtccggctcgttgaaactcaccttcatgttcactggttctttcatggctacaggtaagatgctaatagcctacactccaccagggggggtcactccagcctctaggatggatgcaatgttgggcactcacatcatatgggactttgggttacaatcctcggtttcattagtcataccttggatcagtaatacacactatagggcgcaatccaagaatcagtactttgattattactcctctggagttgtatctatatggtatcagacaaattttgttgtaccagctgagacacccaccacagccaatataatagttctgggagcagctcaacccaacttcactatgcggttgtgcagggatgcagattcattaactcagactgctgagtatcagggtgataag--------gtggcagacatgattg---agactgcggtgagcagaacagtatcctcgc------taacctctcccacccaaattccc-------------------------------acagctgccaacactagtgtgagcaaccaccgaattggccttggggaagttcctgcattgcaagctgctgagactggtgcgacgtccctagtgtccgatgagagcatgatagagactcgctgtgtggtgaacaatcacagcacggaagagaccacagtagggcacttcttttcaagagctggattggtgggggtcatcgacct-cccgctgcaggggacagccaacacagggggctttgcttcatgggatatcgacgtgatgggatatgtccagatgaggaggaagcttgaattattcacatacgctcggttcgatgctgagtttactttcatagcttccactccagatggtgaggtgaaaccattgttcttgcaatacatgtttgtcccacctggcgcgccaaagccaacagggcgcaacacttatgaatggcaaacagctacaaatccctccgtgctggtcaagagcacggaccccccagcacaggtctctgtgccattcatgtctccagccagtgcataccagtggttttacgatggttatccaacctttgggaaacatctccctgctgatgacttccagtatgggatgacgccaaataacatgatgggatcattctgtgctagaatagtgggggaaggaacgcccagtgtgcacctcgtcatccgcatctacatgcgaatgaaacacgtgcgagtgtggatcccgcgaccgatgcgcagtcaaccatatgtcgcaaagaactatcccaattacaaaggatc----tgagatcaagtgcgcctcgtccagtcgtacatcaat---cactac---------------------------------------tttgggc------------------------------------------aagttcggacaacagtctggtgctatctacgtgggaagctatagggtggtgaatagacwccttgccacccacaatgactgggctaacttagtgtgggaagacagttcaagggatctcctcgtttcgtccacgactgctcaaggatgtgatgttatcgctcgatgcaactgccagactggagtgtactactgtaactcccaaagaaaacactacccggttagtttctcaaagcctagcctgatctatgtggaagctagtgagtattacccagctaggtaccaatctcacctcatgctcgcacaaggacattcagaacccggtgattgtggtggtatcctcaggtgccaacacggtgttgttggtatagtgtccaccggtggtaacgggcttgtcggcttcgcagacgtcagggatctcctttggctagatgaggaggcgatggagcaaggtgtgtctgattacatcaag-ggactcggtgatgcatttggaactggcttcaccgatgctgtctccagagaagtggaagcccttaagaaccacctaattggctctgaaggagctgttgaaaaaattctcaagaatttgatcaagttaatttctgcccttgtcattgtaattaggagtgattatgacatggtcacccttacagcaactctagctttgatcgggtgtcacggtagtccttgggcatggattaaagcaaaaacggcgtccattttaggcatccccattgctcaaaaacagagcgcctcttggcttaagaagttcaacgatatggccaacgctgctaagggattggaatggatctccaacaagatcagcaagttcattgattggctcaaggagaagatcataccagcagccaaggagaaggttgagttcctgaacaacttgaaacagttaccg-ctgttagagaaccaaatctcaaatctggaacaatctgctgcttcacaagaggatcttgaagctatgtttggaaatgtgtcatatctagctca---------cttctgtcgtaagttccaaccactatatgccactgaagccaaaagagtctatactttagagaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcattatcaggggctcgccgggcactgggaagtctttggcaactggcatcattgctcgagcgatagctgataagtatcattccagtgtctattcactcccaccagatccagatcactttgacggatataaacaacaggtggttactgttatggatgacctatgccagaaccctgacggtaaggacatgtctttgttctgccaaatggtatccactgtagattttatccctccaatggcttcccttgaggagaaaggagtgtctttcacctctaaatttgtcatcgcatccactaacgccagcaacatcatagtaccaacagtgtcagattccgacgccatccgccgcagattttatatggattgcgacattgaggtgacggactcatataaaacagacttgggcagattggatgccggtcgggccgccaagctgtgctctgaaaataacactgccaacttcaaacgctgtagccctctggtgtgcgggaaagccattcagctcagagataggaaatctaaggttagatatagcgtggacacagtggtgtctgagctcattagggagtacaacaatagatctgccattggaaacacgattgaagccctgttccagggaccacccaagtttagaccaattaggatc---agccttgaggagaaaccagctccggatgctattagcgaccttcttgccagcgtggatagcgaagaggtgcgccagtactgc-agagaccaaggttggattatcccagagactcccacaaatgttgaacgacacctcaacagagctgtgctgattatgcaatccatcgccacagtagtagcagttgtctctttggtgtatgttatctacaagctctttgctggattccagggtgcttactctggtgcccctaagcaggcgctcaagaaacctattctccgcacggcaacagtgcagggcccaagtctcgactttgccttatcactactgagaaggaatatcagacaagtccaaacagaccaagggcactttaccatgttgggagtcagagatcgcttagctgtccttccgcgacactcacaacctggaaagacaatctggatagagcacaagcttgtgaacgttctggacgctgtcgaactagtggatgaacagggggtcaatttggagctaaccttagtcaccctagacaccaatgagaagttcagggatattaccaaattcattccagaaagtatcagcgccgctagtgacgctactttagtgatcaacacagagcatatgccttcaatgtttgtgccagtaggtgacgtcgtgcaatatggctttctaaatctcagtggaaagccaactcaccgcactatgatgtacaattttcccactaaggcaggtcagtgtggaggagtggtcacatcagttgggaaggtcattggcattcacataggaggtaatggcagacaaggcttctgtgcgggactcaagagaagctattttgctagtgaacaaggagagatccagtgggtcaaacctaataaagaaacaggaaggctaaacatcaatgggccaactcgcactaaactcgagcccagtgtgttccatgacgtctttaagggcaacaaagagccagcagtcttacacagtaaagacccccgcctcgaggtggacttcgagcaggcattgttctctaagtacgtgggaaacatactacatgaacctgatgagtacgtcagagaggcagcccttcactatgcgaatcagttgaagcagctagacatagacaccacccagatgagcatggaggaagcgtgctacggcacagataaccttgaggccattgacctccacactagcgcaggttacccctacagtgctctgggaataaaaaagagagatatcctagaccctaccactagagacgtgagcaagatgaagttttacatggataagtatggccttgacctcccttactccacctatgtcaaagacgagcttcgctcgatagataagatcaagaaagggaaatctcgactgattgaagccagcagcttaaacgactcagtctacctcagaatggcctttgggcacctctatgaaaccttccatgcaaaccctggaactgtgactggttcagctgtggggtgtaacccagatgtattttggagcaagctaccaatcttgctccctggttccctctttgcctttgactactcaggttatgatgctagtctcagcccagtttggttcagggcactggagctagtcctcagggagataggctatagtgaggaggcggtttcgcttattgaaggaatcaatcacacacaccatgtgtaccgcaacaagacttattgcgtgcttggtgggatgccctcgggttgctcaggaacatccatctttaactcaatgattaataacattatcatcagaacactccttattaagacattcaagggtattgacttggatgaactcaatatggttgcctacggggacgacgtactcgccagttatcctttcccaattgactgcctagaactagcaagaacaggtaaggagtatggtctaaccatgacccctgctgataagtccccttgcttcaatgaagttaattgggaaaatgcaacctttctcaaaaggggcttcttgcctgatgatcaattcccattcttaatccaccctaccatgccaatgaaggagatccatgaatccattcgatggaccaaggatgcacgcaacactcaagatcacgtgcgatccttatgcctattggcatggcacaatggcaagcaagaatatgaagaatttgtgagcacaatcagatctgtcccagtaggaaaagcattggcaattcccaattatgagaatctgagacgcaattggctcgaattatttt-----agaggttagat-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaacat-g-actg--------gtgggggtaaatttgt-at-ccac--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY421769.1_Human_coxsackievirus_A14_strain_G-14_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgattctgcgggatctttgtgcgcct-g-ttttata-----tcccc---t---cccc-cc--a-aactaggtaacttagaaga------------ttagcacttgtat-gaccaa-tagtaggcgtgacgcgccagtcatgtcttgg-tcaagcacttctg-tttccccggactgagtatcaataagctgc-ttgcgcggctgaaggagaaaacgttcgttacccggctaactacttcgagaaacc-tagtaacaccatgaaagttgcggagtgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-aaccccacgggtgaccgtggcagtggctgcgttggcggcctgcctat--------gggtcaa-cccataggacgctctaatacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacacgcttgcaaacca-gtgag-tagtgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attctcatactggctgcttatggtgacaattgaa-------gaattgttactatatagctattggattggccatccgg--tgtgtaacagagcgataatc-----tactcc----tttgtt-gcatttgttccac-----taaccct--------------tactacattagac-attctacaatacatactttatctcaactccaagaaac-gaacatgggagctcaagtgtcaacgcagcggacaggctcacacgaaaccatcaacaccgttcgtg-acgggtccaccctgaacttcaccaatattaattattacagggagtcatacgcggcagcagcaaacagacatgatatggcccaggatccttccaaattcacaaaacctgttttagatatacttacagaaatggctgctccccttcaatcaccgactgccgaggcgtgtgggtatagtgatagagtagcacaacttaccatcggcaactctactataacaacacaggaggctgcgaacgtgatagtggcgtatggagaatggccagagtattgtagcgacactgacgccactgcagttgacaagcccacgaggcccgatgtgtcagtgaacagattttacactttggatactaaagactggcaagcca------------------gttcaaaagggtggtactggaagtttcccgacgtgttagcaatgacaggtgtcttcgggcaaaatgcacaataccattatttgtacaggtcagggttttgcattcatgtacaatgcaatgccagcaaatttcatcaaggcgcgcttctcgtagctatagtgccagagtatgtaactggtacga------tagccggcaataccggtaacgagcacacacaccctccctatgccaccacacaaccagggttggacgggtttcctctattcaacccttatgtgttagatgctggtatacccatcagccaattattgatatgtccacaccagtggatcaatcttaggactaacaattgcgccactctcatagtgccttacattaacacagtgccttttgattcagctctgaaccactgtaattttggcttagtggtaatcccgatatcacccttgtcctacgcatcaacagcaaccaccactatcccgataacaatcactgtagcaccaatgtgttctgaatttgctggcctcagacaggccgtgcagcaagggattccagcagaacttaraccaggcactaaccaatttctcaccactgaggatggtacatcagctccgatattgcccgggttccacccgactcaggttatacacataccgggcgaggttagaaaccttctcgaattgtgccaagtagagacaatgctagaagtcaacaa----------cttagagtcaaacgagaatgaccca------atgcagcggcttctgattccagtgcagtctcagagtg------agaaaggtaagttatgtgctgtcttccgagcggacccaggtctcgacgggccatggcaatcaaccttattagggcagctgtgcaggtattacacacagtggtccggatcactgaaacttaccttcatgttcacaggctcgttcatggccactggcaagatgctaattgcctacactccaccgggcggagttaccccagcctctagaatggatgcaatgctaggcactcacatcatatgggattttgggttgcaatcttcagtttcgttagtcataccctggatcagcaacacacactacagagcgcagtcgaagaaccagtattttgattattattcctctgggatcatatctatatggtaccaaacaaactttgttgtaccggctgagacacccaccacagccaacataatagtcttgggagcagctcaacccaactttactatgcgtctatgcagagacgctgactctttgacccaaaccgctgaataccaaggtgacaaa--------gtggcagacatgattg---agaccgcagtggagaagaccgtgtcctcac------taacttcccctactcaaaccccc-------------------------------acagccgccaacacaaacgtgagtaatcatcgaattgagctgggggaagtcccggctttgcaagctgctgaaaccggcgcgacgtctcttgtgtctgatgaaaacatgatagagactcgttgtgtagtgaatagccatagtacagaggaaactacagtggggcacttcttttcaagagcggggttggtgggagtgattgacct-cccattacagggaacagtcaacacaggaggattcgcctcgtgggatattgatgtaatgggatatgttcagatgagaaggaaacttgagctgttcacatatgcccgcttcgatgcggagtttaccttcatagcttccaccccagatggcgaggtgaagccagtgttcttacagtacatgttcgtcccccctggtgcaccaaaaccaacagggcgcaacacctacgaatggcaaactgcaacaaacccttctgtgttggtcaagagcacagatcctccagcacaagtctctgtaccgttcatgtcaccagccagcgcatatcagtggttctatgacgggtacccaacctttggaaagcacctgcctgctgatgactttcagtacggtatgaccccaaataacatgatgggatcgttctgtgccaggatagtgggggaaggagcgcctagtgtacacttggttatccgtatctacatgcgcatgaaacacgtgcgggtgtggattccacgacctatgcgcagccagccatacgttgcgaagaattaccctaactacaagggttc----tgagatcaagtgcgcatcatctagtcgtaagtcaat---caccac---------------------------------------attaggt------------------------------------------aagtttgggcaacaatctggcgccgtctatgtgggtaacttcagagtggtaaatcggcaccttgccactcacaatgactgggctaatctagtgtgggaagatagctcacgggacctcctcgtgtcatccactacggctcaagggtgtgacaccattgcccgttgcaattgccagacaggagtatattactgcaattcaaggagaaaacactacccggtcagtttctcaaaacccagccttgtctttgtggaagccagtgagtactaccctgctagatatcaatcacaccttatgctcgcagaaggtcactctgaacccggagattgtgggggcattctgaggtgccaacacggtgtggttggcatagtatccactgggggtaacgggctcgtcggttttgccgatgtgagagatctactgtggctggatgaagaagccatggagcaaggagtgtctgattatatcaag-ggacttggtgatgcatttggaacaggtttcactgacgctgtttccagagaggttgaagccctcaaaaaccatcttattgggtccgagggagcagttgaaaagattctcaaaaacctcatcaagctaatttcagcactggtgatagtaattaggagtgattatgacatggttactctcacagcaaccttagctctgatcggatgtcatggaagcccttgggcttggattaaagccaaaacggcatccattctaggcattcctattgcccagaagcagagcgcgtcttggctaaaaaaattcaatgacatggccaatgctgccaaagggttagagtggatatccaacaaaatcagcaaattcattgattggctcaaagagaagattataccagcagctaaagagaaggttgaattcttgaataacctgaaacagctacca-ctgttggagaatcaaatctcaaacctagaacaatctgctgcttcacaagaggaccttgaagcaatgttcgggaatgtgtcataccttgctca---------tttctgtcgcaaattccagccactgtacgctacagaggccaagagagtctatgccctagagaaaagaatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcattatcaggggttcgccaggcactgggaaatctctaacaaccggcattatcgccagggcaatagctgataaataccactccagtgtgtactcactcccaccagacccagatcacttcgatgggtacaaacagcaagcggtcacagttatggatgacctatgtcaaaatcctgacggcaaggatatgtcattattttgtcagatggtgtctactgtagacttcatcccaccaatggcttcccttgaagaaaaaggagtttctttcacatccaaatttgtcattgcgtccaccaatgccagtaacatcatagtgccaacggtatccgattctgatgccatccgtcgcagattttatatggattgtgacattgaagtgacggattcatacaaaacagatttgggcagattggacgctggacgtgccgccaaattatgtacagagaacaacactgcaaactttaaacgctgcagcccactagtgtgtgggaaggctatccaacttagagacaggaaatccaaggtcagatatagtgtggacacagtagtctctgaactcattagagagtacaataataggtctgctatcggcaacacaattgaagctctgtttcagggcccacccaagttcaggcccattagaatc---agccttgaggagaagccagccccagatgccatcagcgacctccttgctagcgtggacagtgaagaagtgcgccagtactgc-agagatcaaggctggatcatcccagaaacccccaccaatgtcgagcgccatcttaatagggcagtgctggtcatgcaatccattgctactgtggtggcagttgtttcactggtgtatgttatttacaaactttttgcaggattccaaggtgcatactctggtgcccctaagcaagcactcaagaaacctgttctccgcacggcaacagtgcagggcccaagtctcgactttgctctctctctgctgaggaggaacatcaggcaagtccaaacagaccaagggcacttcactatgctaggtgtcagagatcgcttggctgtcctcccgcgacattcacagcccggaaaaacaatctgggtggagcacaaacttgtgaacattctggacgctgttgaattggtggatgaacaaggagttaacttagaactgaccttggtcactcttgataccaacgagaagttcagggatatcaccaaattcattccagagaatatcagtgctgctagtgacgccactctagtgatcaacacagaacacatgccctcaatgtttgtgccagtgggtgacgtcgtgcagtacggtttcctgaacctcagcggaaaacctacccatcgtactatgatgtacaactttcccactaaagcagggcaatgtggaggagtggtgacatctgttggaaaggtcattggtattcacatcggtggcaacggtaggcaaggtttctgtgcaggacttaaaagaagttacttcgccagtgagcaaggggaaattcagtgggtcaagcccaacaaagagactggaaggctcaacatcaatgggccaacccgcaccaagctcgaacctagtgtgttccatgacgtcttcgagggaaacaaagagccagctgttttacacagcaaggatccacgtcttgaagtggactttgaacaggcactattctccaagtatgtagggaacacacttcacgagcctgatgaatacattaaggaagcggccttccactatgcaaaccaattgaagcaactggatattgatacttctcaaatgagtatggaggaggcttgctatggaactgagaacctagaggccattgaccttcataccagtgcaggctatccttacagtgctctgggaataaagaagagagatatcctagatcccatcaccagggatgtaagtaagatgaagttctacatggacaagtacggccttgaccttccttattccacctatgttaaagatgagctccgctcaattgaaaagatcaagaaagggaaatcccgtctaatcgaagctagtagcttgaatgactcagtgtacctcagaatggcttttggccatctgtatgaaactttccacgcaaaccctgggactgtgactggctctgccgtggggtgtaacccggatactttctggagcaagctaccaatcttgctccctggttcactcttcgcctttgattattcaggttatgatgctagtctcagtcctgtttggtttagagcactggagctagttcttagggagataggctatagtgaggaggcgatttcactcattgaggggatcaaccatacacatcatgtgtaccgcaacaaaacctattgtgtgcttggtggaatgccctcaggctgctcgggaacatccattttcaattcaatgattaacaacatcatcattagggcgctactcataaaaacattcaaaggtgttgacctggatgagcttaacatggtcgcctacggggatgacgtacttgctagttaccctttcccaattgactgtctggaattggcgagaacaggtaaggagtatggcttgactatgactcctgcagacaagtctccttgctttaatgaggttaattgggacaatgcgacctttctcaaacgtggttttttgcctgatgagcagttcccattcttgatccatcccaccatgccaatgaaggagatccatgagtctattcgatggaccaaggatgcacggaacactcaagatcacgtgcgatccctgtgccttctggcatggcataacggcaaacaagaatatgagaaatttgtgagtacaattaggtctgtcccagtaggaaaagcattggccattccaaattatgaaaatctgagacgtaattggctcgaattatttt-----agaggttagac-------------------------atac---------------ctcaaccc-caccagag----atctggt------c-g-----tgtatat-g-actg--------gtggggttaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY421766.1_Human_coxsackievirus_A8_strain_Donovan_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccaa-t-gggcgtcagcactctggtaccgaggtacctttgtgcgcct-g-ttttatt-----tcccc---t---tccc-ctgat-------gcaacttagaagctc--------------cgaactaat-gatcaa-tagtaggtgtggcacgccagccacatcttga-tcaagcacttctg-tttacccggaccgagtatcaataagctgc-gcaagcggctgaaggagaaagcgttcgttatccggccaactacttcgagaagct-tagtaccaccatgaacgttgcagagtgtttcgttcagca--caa-ccccg---gtgtagatcaggccgatgagtcaccgcg-ttccccatgggcgaccatggcggtggctgcgttggcggcctgcccat--------ggagcaa-tccatgggacgctctaatactgacatggtgcg-aagagcctattgagctagttggtgatcctccggcccctgaatgcggctaatcctaactgcggagcatgcgcccacaagcca-gtggg-tggtgtgtcgtaacgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttacattggctgcttatggtgacaattgaa-------gaattgttaccatatagctattggattggccatccgg--tgtgcaatagagcgattata-----taccta----tttgtt-ggatttgttccat-----tgacata--------------tagatctcttaac-actctacaacacatcttgatcttgaacacgagaaa-------atgggggcacaagtttcaacacagaaatctggcagccatgaaactggcaatatagccactg-aggggtctactatcaattttaccaacatcaattattacaaggactcatatgctgcttctgccagtaggcaggacttcactcaagatcctaccagattcactagccctgtacttgatgcactgagagaagtggcaccccctttgaaatcaccttcagtggaagcgtgcgggtacagtgacagagtggcacaactaactgtggggaattcgacaatcacaacacaagaagctgccaacatagttcttgcctacggggaatggcccgagtattgccccgataaggatgccactgcagtggacaaacccacacgtcctgatgtatcagttaacaggttttacaccatgtccacacaaatgtggcaggata------------------cctcaaagggatggtattggaagtttcctgatgtcctcactaaaacaggtgtttttggtcaaaacgctcagtaccattacttgtacagatctggcttctgcatacacgtccagtgtaatgccagcaaattccatcaaggagcgctgctggtggcagctgtacctgagatggtgttgggagccaacagttcggaccctaagcccaaca---ctgcaaagcacccagaattcgctacgaccatgccaggtgccaacggtggaacgtttgagaacccttatattatggatatgggagtccccttaagtcaagccctcgtgttcccccatcagtggatcaacttgcggactaacaattgtgccaccattatagtgccctatatcaatgctgtcccatttgactctgctattaatcacaacaacttcacgctggttgtgatcccaattagtcccctgaaatattgcactggtgcaacaacagccatccctataacagtaacaatagccccgctgaactcagagttttgtggtttaaggcaagctaccacgcaagggataccagttgaactaaaacctggcactaatcaatttctcacgactgacaatgaggtctcagtgcccatactgcccgggtttcaaccaacgccgactatacatataccgggcgaggtcaataatctcctagagctctgccaagtggagtccatccttgaggtcaacaa----------t------gtaaccggacaagaagga------ataaaccggctcctcatcccagtatccacacaaagtg------acaaggacactttgtgtgcatcacttcgagtagacccgggtagggacgggccatggcaatccaccttggttggtcagatatgtaggtactacactcagtggtcaggctcactggagattacgttcatgtttactggctcatttatggcgactgggaaaatgctgatagcgtactcccctcccgggagtgcacaaccaaccacaagagacctggccatgcttggcacccatgttgtgtgggatttcgggctacaatcatccattactcttgtcatcccatggatcagcaacacacacttcagaacaggcaaggttggtggctatttcgattactacgcttccggcatagtgaccatctggtaccagacaaactttgttgtacctcctgatacaccgagtcaagcacacataatagctctgggtgctgcacagaagaattttacactcaaactgtgcaaggacacagatgaggtcacgcagcaagcagtattacaaggagattcc--------attgaagacataataa---gcaacactgt-----cacccgtacactgcaacaaatcagtgccccatcacacgacact--------------------------------acagcagccaacacctcagtgagtaatcataaaattggtacgggggatgtcccagctctccaagctgcagagactggcgctacttccaatgcctcagacgagaacatgattgagacacgatgtgtgttaaatcgcaatggggttgtggaaactagtttggaccatttcttttcaagagcaggccttgtgggagtgatcaatgtgcaagatggcggcactca-------gaagggttttgaagtgtgggacatagatgtcatggggtttgttcaactcaggaggaagttggagatgttcacgtacatgaggttcaacgccgagttcacattcgtatccacactcgcggatggcacaactcccagagtgatgttgcagtacatgtacgttccacctggtgcccccaaacctcaggagagagattcgtttcagtggcaaactgcaaccaacccatcagtattttgcaaaatgagtgaccctcctccacaggtttccgttcctttcatgtcaccagctagtgcctaccaatggttctacgatgggtacccaacattcgatgatcgaccggccacctcaaaccacccgtacggtcagtgccccaataacatgatgggcacattcgcagtgcggtttgtcagcaagaccccagccacacgggatctgcgtgtcagagtgtacatgcgcctgaaacacgtgcgcgcatgggtaccgagacctatccgatctcaaccctatattttgaaaaactacccaaattatgatggcac----aaagataacgtcgacatctaaggat-----------------------------aggcaaagcatc-------------aaaacaacaggg------------------------------------------aaatttggacagcaatcaggggctatatacgtgggcaattacagagtagtgaacaggcatcttgccacccacaatgattgggccaacctggtctgggaggacagctccagagatcttttggtgtcttcaactactgctcaagggtgcgacaccattgcccgatgcaactgccagatcggagtgtactactgcaactcccgcaggaagcactacccagtcagcttctccaaacctagctttgtctttgtggaagcgagcgagtactacccagctagataccaatctcaccttatgctcgcacaaggtcattcagagcctggagattgtggtggtatactcagatgccaacacggtgtcgtagggatagtctcgaccgggggaaatggcctcgtggggtttgccgatgtgagggatctcttgtggttggatgatgaagccatggaacaaggcgtgtctgattacatcaag-ggacttggtgacgcttttggtacggggttcactgacgcagtgtcaagagaggttgaggctttgaagaattatttgatcggttcagaaggtgctgtggaaaagatccttaagaacctggtaaagctcatctctgcacttgttatcgtcgtcaggagtgactatgatatggtcacgttaacagcaacacttgccctgattggatgccacgggagcccttgggcctggattaaatcaaagacagcgtcgatcttaggcatcccaatggctcaaaagcagagtgcctcttggctgaagaaattcaacgacatggcgaacgccgctaaagggctcgaatggatctccaacaaaatcagtaaattcattgattggctcaaagagaagatcatcccggctgcgaaagagaaggttgagtttttaagtaatttgaaacaactccct-ttgttggagaaccaaatctctaacctcgagcaatcagccgcgtcgcaggaagatcttgaagcgatgtttggcaatgtgtcctatctggctca---------cttctgccgcaaatttcagcctctctatgccacagaggcaaagagggtgtatgccctggagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgcctggtcattagaggttcgcctggcacaggaaagtccctggcaacggggattattgctagagctatagcagataagtatcactctagtgtgtactccctacccccagacccagatcacttcgatgggtacaagcaacaggtcgtcactgtcatggacgacctctgccagaacccagatgggaaggacatgtcactgttttgtcagatggtctccacagtggactttataccacctatggcatctctagaggagaaaggagtttcatttacatccaagtttgtgattgcttccactaatgcgagtaacatcatagtaccaacggtctcagactcagatgccattcgtcgccggttctttatggactgcgacatcgaagtgaccgactcctacaagacagacttgggtagacttgatgcggggagagcggctaggctatgctctgataataacactgcgaacttcaagcgatgcagtccattagtttgtgggaaagccatccaactcagagacagaaaatccaaggtgaggtacagcgtggacacagtggtgtccgagctcattagggagtgcaacaataggtcagctattgggaacaccattgaagctctcttccaggggccccctaagtttagaccgataagaatt---agtctggaggagaagcccgcgcctgacgctattagtgatttactagctagtgttgacagcgaggaggttcgccaatactgc-agagatcaggggtggatcgtgcccgatactcccaccaacgtagagcgccacttaaacagagcagttttgattatgcaatccatagctactgtggtagcagttgtgtcccttgtttacgtcatctacaaactgttcgctggtttccaaggagcatactccggtgctcctaagcaagcactcaagaaaccagtgttacgctcagctaccgtgcaggggccaagtttggacttcgccctgtccctacttagaaggaatatcagacaggttcaaactgatcagggccactttaccatgctaggagtgcgagaccacctagctgtactccctagacactcccaaccgggaaaaaccatttgggttgagcacaaactagtgaagatcttagatgctgtagagctagtagatgaacaaggagtcaacttagagctcacactagtgacactggacaccaatgaaaagttcagagacatcacaaagtttataccagagactattagccctgctagtgatgccaccttggtgataaatactgagcacatgcctagcatgtttgtaccggtcggagatgtggtccaatacggcttcttgaaccttagtggtaagcccacccaccgaactatgatgtacaacttcccaacaaaagcagggcagtgtggtggtgtcgtaactgcagtaggcagagtgattggtatccacattggtggcaatggtagacagggcttctgcgctgctctgaagagagggtacttttgcagtgagcaaggtgagattcaatggatgaagcccaacaaagaaactggcaggttgaacattaatgggccaacccgcactaagcttgaaccaagcgtctttcatgacgtgtttgagggcaccaaggaaccggcagtgctgactaacaaagatcctaggctagaagtagactttgagcaagccttgttttcaaagtatgtggggaacacgctccatgagcctgatgaatttgttagagaagcagctctgcattatgctaaccaactcaagcaattggatattaaaaccaccaagatgagcatggaggatgcttgctatggcacagaaaatttggaggccatagaccttcacacaagtgcagggtacccatatagtgcattgggcatcaagaagagagacatcttggacccaacaactcgtgatgttagcaagatgaagttttacatggacaagtacgggctagacctaccatactctacttatgtcaaagatgaactcagggccatagacaagatcaagaaagggaagtctcgcctcatagaggcaagtagcctaaatgactcagtatacttgaggatgacatttgggcacctttatgaagctttccatgctaatccaggtacaatcaccggttcagctgtcggatgcaacccagatgtgttctggagcaagcttccaattctgctcccgggatcgctttttgcatttgactactcagggtatgatgctagtctcagtcctgtatggtttagggcactagaaatagtcctgcgggaaattggctactcagaggaagcagtgtctcttatagaagggatcaaccacactcaccacgtgtaccgcaataaaacctattgtgtactcggagggatgccctcaggctgctcaggtacttccattttcaactcaatgattaacaacatcattatcaggacactcttgattaagacgtttaaggggatagacctagacgagttaaatatggtggcttacggggatgatgtgttagctagttacccttttcccattgattgcctagagctggcgaaaacaggcaaggagtatggtttgactatgacccctgccgacaagtcaccctgcttcaatgaggtcacttgggagaatgccaccttcttgaaaaggggatttctacctgatcatcaattcccattcctaattcaccccacaatgcctatgaaggagattcacgagtccattcgttggaccaaggacgcgcgcaacacccaagatcacgtgcgttccctctgcttgttagcatggcataatggaaaggaggaatatgaaaattttgtgagcacaattagatcagttccgattggaaaggcattggctataccaaacttcgagaatctgagaagaaattggctcgaactatttt-----aaacttacagt-------------------------ttatg-------------actgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>LK021688.1_Enterovirus_A120_complete_genome_strain_MAD-2741-11
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactgatttcacggaatccttgtgcgcct-g-ttttaca-----ccccc--tc---cccc-c-----aactcagtaacttagaagt------------tgtaaacacacgt-ggccaa-cagcgggcgtagcgcaccagctatgtcttgg-tcaagcacttctg-tttccccggacagagtatcaataagctgc-ttgcgcggctgaaggagaaaatgttcgttacccggtcaactacttcgagaaacc-tagtagcatcatgaatgttgcgaggcgtttcgctcagca--ctt-ccccc---gtgtagatcaggtcgatgagtcactgca-ctccccacgggcgaccgtggcagtggctgcgttggcggcctgcccat--------ggggtga-cccatgggacgcttcaatacggacatggtgtg-aagagtctattgagctagttgataatcctccggcccctgaatgcggctaatcctaactgcggagcacataccctcaaccca-ggggg-cggtgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atacttatactggctgcttatggtgacaattgaa-------gaattgttaccatatagctattggattggccatccgg--tgactaacagagctattata-----tattta----tttgtt-ggatttgttccat-----taacata--------------cacatctttcagc-actttacacctcattttacaatacaatacaagaaaa-------tgggagcacaggtttctacgcagaagtccggaagtcatgagactggcgtcgtggcggcag-aaagttccaccatcaactttaccaacatcaattactacaaggattcttacgcagcttcggcgagtaaacaggacttcactcaagacccgaagaaattcacgagccccgtgctagatgtgttgactgaaatggctgcaccacttcaatccccaagcgcagaagcgtgcggttacagtgatagagtggcacaattgacagtggggaattccaccatcacaacccaagaagcggcgaatgttgtggtgtcctatggtgaatggccagattactgcccggacgttgacgccactgcggtggataaaccgactagaccagatgtggctgtgaacagattttacacttttgacaccaaggactgggccaaga------------------attctccaggctggttttggaaattcccggatattttgacagaagtcggtgtattcggacaaaacgcacaatttcactacttataccgatctggattctgcatacacgttcagtgtaacgcaagtaaattccaccagggcgccctgctggtagcggtcttgccagaatacgtgttaggcacagtgtcaggaaacacaggagtag------agcacacgcaccctccattcgccaccacccagccaggtccaaatggttttcaactacaacatccatacatccttgatgctggaattccacttagtcaactattggtatgtccacatcagtggataaatttgagaacaaacaactgtgctaccatagtagtgccatatattaacacagtgccctttgattccgctttaaaccattgcaactttggccttttggtggttccagtatcccccttagattacatgacaggcgcaacgcccaccatcccaatcaccctcacagtagctcctatgtgctcagaatttggaggcttaagacaagcagttaaacaaggctttccagttgtacttaatccaggctcaaatcagttcctaaccacgagtgataggagtgcccccccaattttacctggctttcaccccactccacaaatacacatccccggggaagtacacaacttgttggagttgtgtcagatagatacaatcttagaagtgaacaa----------cctcacagaaaacgagtccaatcca------atgcaacgcctcgtaattccagtcaaagtgcaaacgt------ccaatggggccctgtgtgcagcattcagaacagatcctggattggatggcccttggcaagctactattttagggcagctgtgccggtactacacgcagtggtcgggatccttgaaaataacctttatgttcactggatcattcatggcgactgggaaaatgctaatagcatacactccccccggcggtggattgccaaaagacagaatgacagcgatgcttggtacacacgtcatttgggattttggattacaatcatcagtcacacttgtggtaccgtggatatcgaacacacacttcaggacacaagccaccggtaattattatgattattactcgaccggtgttgtcacgttgtggtatcagacaaattttgttgtaccagatggtgcccctaccacagcaaacatcatagttttggggtccgcgcaaccaaatttcacaatgcgactatgtcgtgatgcagtgtcactcgcacagacagcagaatttcagggtgaccct--------atagcagacatggtag---aaacccatgt--------------------------atccaccacaatgggcgacattctcaac----ccccaccagcag-------cctacggctagcgatgtcgaggccagctcacatgctataggacttggcagagtgccagcgctccaagcagcagaaacaggcgcctcatcaaacgctacagataaaaatatgatagagaccaggtgtgtggtcaacagacatagcacagcagagactaccttgacacacttctattccagatcgggactggtaggagtaattgatctacccacccagtcaac----caaaccagtgggcttcgcctcatggacaatagatgtgatgggatatgtgcagatgcgcaggaagcttgagctgcttacctacatgcgttttgacgctgagttcacctttgtagccacaaccccaaatggagcatcgaaggatctggttctacaatacatgtacgtgcctcccggtgcccctaaacctaccgctcgaaacagctacgagtggcagacggcaacaaatccctcagtgttcgttaaaagtagtgacccaccagctcaagtatcagtgccttttatgtcacctgctagtgcctaccaatggttttacgatgggtatccctcattcggagaacataagcaggaacaagacttccagtatggcatgacccctaacaacatgatgggtgacttttgtgcacgtgtagtggggagtggaacgccaccgacatcgctaaccatcaggatctatatgcgattaaagcacatcagagggtggatacccaggcccatgcgtagtcaggattacacggctaggaattatcccaactacaacggctc----caacatcaaatgcaccaccgtgagccgcacatctat---aaccac---------------------------------------attaggt------------------------------------------aagtttggccaacagtctggagccatctatgtgggcaacttcagggtggtgaatcgtcatcttgccactcacaatgattgggcaaacttagtgtgggaggatagcgccagagatctgcttgtgtcgtcgaccacagctcaagggtgcgacaccattgctcgctgtaactgccagactggagtgtattattgcaactcccgaagaaaacactacccagttagtttctctaagcctagtttaatttttgtggaagctagtgagtactacccagctagataccagtcacatcttatgcttgctgagggtcactctgaaccgggagattgtggcggaattctcaggtgtcaacatggggttgtgggcattgtctccactgggggtaatggcttggtcggattcgctgacgtcagggatctcttatggttagatgaagaggccatggagcaaggcgtatccgactatatcaaa-ggattgggcgatgcctttggcacaggattcactgacgcagtgtctagggaagtggaagccctgaaaaatcacttagtcggctcggagggagcagtggagaagatcttgaagaacctggtgaaactcatttcagccttggtcatagtcattagaagtgattatgacatggtcactctcaccgcaactcttaccctaatcggatgtcacggtagcccttggtcatggatcaagtcaaaaactgctgccatattgggcattccgatggcccagaaacagagtgcgtcttggttgaagaaattcaatgacatggcaaatgctgcaaaggggctggaatggatctccaacaagattagcaagtttatcgattggcttaaagaaaagattgttccagctgctaaagaaaaggttgagtttctaaataacctcaagcagttgcct-ttattggagaatcaaatatctaacttagagcagtctgctgcctctcaggaggaccttgaagctatgtttggtaacgtatcatacctggctca---------cttttgtcgcaaattccagccactttatgcaactgaggcaaagagagtttatgctctggagaaaaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtgtgcttaattatcagaggctcaccagggacaggcaaatcacttgccacaggcattattgccagagctatcgctgataaatatcactctagtgtgtattccctcccccctgatccagaccattttgatggatataagcagcaagtggtgacagtcatggacgacctgtgtcaaaatcccgatggtaaagacatgtcgttgttctgccaaatggtgtccactgttgacttcatccctccgatggcatccctagaagagaaaggggtatctttcacttcaaaatttgtcatcgcttcaaccaacgctagcaacatcatcgttcccacggtctcagattctgatgctatccgcaggaggtttttcatggactgtgatattgaagtaactgactcttacaagacagatctcgggcgcttggatgcgggtagggccgcgagactttgctcggaaaacaacaccgccaacttcaaaaggtgcagtccactagtgtgcggtaaagctatccagttgagagataggaagtccaaggttaggtatagtgttgatactgtggtgtcagaactggtcagagagtataataatagatcagccatagggaacaccatagaagctctgtttcaagggccgcccaagtttagacccataaaaatc---agtcttgaggagaaacctgctccggatgccattagtgatttgcttgctagtgttgacagtgaagaggtgcggcagtactgc-agagatcaagggtggataatacctgagacaccaactaatatagagcgacacctcaacagggcagtactagtcatgcagtccattgccactgtggttgcagttgtatcccttgtctatgttatctacaagttgtttgctggtttccaaggtgcatactccggagcgcccaagcaaaccctcaagaaacctgtgttgaggacagctactgttcaagggcctagcctagattttgccctatcccttctgcggcgcaacatcaggcaggtgcaaaccgaccaaggacacttcaccatgctcggggtacgcgatcgccttgctatcttgccccgtcattcacaaccaggcaaaaccatctggattgagcataagctggtcaatgtacttgatgctgttgagctagtggacgagcaaggtgtcaacctggaacttacactagtgactttagatactaatgagaagtttagagacatcactaaattcattccagagagcatcagcggtgctagcgatgccacattggtgatcaacaccgaacacatgccgtcgatgtttgtcccagtaggggatgttgtacaatatgggtttctaaatctcagtggtaaaccaacccacaggaccatgatgtacaatttccctacaaaggcagggcagtgtggaggtgtggtgacatctgttggtaaagtcattggtatccacattgggggcaatgggcggcaagggttctgtgctggtctgaagaggagttattttgcaagtgaacaaggtgagatccagtgggtaaaacccaacaaggagactggcagactgaacatcaatggtccaacacgcactaagttagagcctagtgtgttccatgacgtgtttgagggcaataaggaaccagcggtcttgacaagcaaggatcccagactggaggttgattttgaacaagccctcttctccaagtacgtgggcaatgttctccatgaacctgatgagtatgtgcgacaagctgccctccactatgccaaccagctcaagcaactagacataaacaccaacaaaatgagcatggaggaagcatgctatggcacagaaaacttagaagctattgacctccatactagcgctgggtacccatacagtgctctgggcataaagaagagggacatactagaccccacttccagggatgtgtcgaaaatgaaattttacatggataaatacggcctggacttgccctactccacctatgtgaaagatgagcttaggtctctagacaagatcaagaaagggaaatctcgcttaatagaagctagcagtctgaacgactcagtgtatcttagaatgacttttggccacctttatgaagtgttccacgccaacccagggacagtaacagggtcagcagttgggtgtaacccagatgtgttctggagtaagctcccgattctactgcctggatcattgtttgccttcgattactcaggttatgatgctagtcttagtcctgtctggttcagggccttggagatggtcctacgtgacattggttattcggaagaagcagtgtcactcatagagggaataaaccacacccaccatgtgtaccgaaataaaacatattgtgtccttggtgggatgccctcaggatgttcaggtacctccatcttcaactcaatgatcaacaacattatcatcaggaccctcttgatcaaaactttcaaagggatagatctggatgagttaaacatggtggcttatggagatgatgtactagctagttaccctttccccattgattgccttgaactggctaagactggcaaggagtacgggctaaccatgacaccagcagataaatcaccctgctttaatgaggtaacgtgggagaatgctacgttcctgaagagagggttccttccagaccatcaatttccatttttaattcaccctacactgcctatgaaagagatccatgagtccatacggtggaccaaagacgcacgcaacactcaggatcacgtgcgttctctgtgcctattagcttggcacaatggtaaggatgagtatgaaaaatttgtgagtacaatcagatcagtaccaattgggaaagcattagcaataccaaattttgagaatctgagaagaaattggctcgaattatttt--aa-atttacagttt-------------------------aaga---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF422142.1_Coxsackievirus_A12_strain_QD-LXH535/SD/CHN/2009_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgtcagcactctggtacctcggtacctttgtgcgcct-g-ttttata-----tcccc-------ccccatt----------gaaacttagaagc------------aatgcacctc----gatcaa-tagcgggcgtggcgcaccagccacgtcatga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-taacgcggttgagggagaaaacgtccgttacccggccaactgcttcgagaaatc-cagtaacatcatgaaaattgcagagtgtttcgctcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcctgt--------ggagcaa-cccacaggacgctctaatatagacatggtgtg-aagaatctattgagccagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgtgccctcaatcca-gtggg-tagcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--attt---attcttacattggctgcttatggtgacaattgaa-------agattgttgccatatagctattggattggccatccgg--tatcgaatagagcggttatc-----tatcag----tttatt-ggatttatcccgt-----tgagtgtgcagcagtatcgc---------------actttgcttttaatagtgagactgaatagtataaaa-------tgggcgctcaggtatcaacacaaaaatctgggtcccacgagacaagtacttttgcatcag-aaggctctactataaattttaccaacattaattattataaggattcgtacgccgcatcagctagtaggcaggatttcacccaagatccaagtaaatttaccagccccatactagatgcattgagagagacagctccccccttgaagtcacctagtgcggaggcatgtggttacagtgatcgcgtggcacaactgactgttggcaactcgaccatcactactcaggaggctgctaacattgtgatggggtacggggagtggccggaatattgcgcagacacagacgctacagcagtagacaagcccacccgcccagatgtgtcagtgaatcgcttttacaccctatctgctaagatgtgggacaaaa------------------gttccaaaggatggtactggaagttcccagatctactaacgcaaaagggagtgtttggccaaaacgcacagtttcactatttgtacagggcgggattctgcatacacgtgcagtgcaatgctagtaagtttcaccaaggagctctgctggttgcagctttgccagagcacgtagtggctggaatgggaccgggagataagccgcaaa---atgcaccgcatccaacctaccaggtcacccagcccggtgctggcgggcaggaactgacacacccttatgtgctggattgtggcatacctattagtcagctcttggtgtgcccccatcagtggatcaacctgcggacaaataattgtgccaccatcataatgccatatactaattcggtgccatatgactcggccattcaccataacaatttcacattatttgtgatcccgatagcgccattgaattatgacacaggagccacaacagccataccaatcactatcacagtcgctccattatgtgctgaattcggaggcctaaggcaagctgtgcaacagggggtaccgatggagttaaaacccgggtcgaaccaattcctcaccactgacgacgaggtttcagctcccattttacctgggtttaatgcgactcccaacattcatatccctggggaggtgaccaacttacttgaattgtgccaaattgaaactatgctagaggtgaataa----------------tgtcaccgatgtagatggc------atgcagaggctcctaataccagtgtccgcgcaaacag------aggcagataagttgtgtgcttcgtttaaagtggacccggggagagatgggccatgggaggccactacagttgggcaaatatgtcgatattacacccagtggtctggctctttggaggtgacatttatgttcactgggtcattcatggcaactggcaaaatgctcattgcatacaccccacctgggggccaacaaccggccactagggacatagccatgttgggaactcatgtcatttgggattttggcctgcagtcctctgtcacactagtgatcccatggataagcaacacccactatagaacagtagagactggagggatcctagactattattctacaggggtggtcactatctggtaccaaacaaactttgtagtcccaaatggggcccctactagcgcatatattattgcaatgggggcagctcaaaagaatttcactcttaaattgtgccgggacacagaatctatatcccaaacagctatcttgcaaggggacacc--------gtgagtgacatgatag---agagctccat-------------------------------------taatcgaatcaccaacgcaatttctaccactcaaacccaccaaacggcggctgacacgagagttagtaatcacagactgggcacgggtgaggtgccggccttacaagcagcagaaacaggcgctacctctaacgcaactgatgagagcatgattgaaacacgctgcgttgtcaataagcatggagtgagtgagactagtgtggaatacttcttctctcgatcaggcttggcaggtgtcgttgtggtagaggatgcgacagctac----caacaaagggtatgccacatggaagatcgatgttatgggctttgcccagctgcgccgcaagctagagatcttcacatacatgcgctttgacgcagagttcacttttgtggcgacagagcgcaatggaaataccagtcctgtcatgttgcagtacatgtttgtacctccaggtgcccccgttccaacagggagagacactttccaatggcagtcagcgacaaatccctcaatactggtgaagatgacagacccccctgctcaagtggcaatccctttcatgtcaccagcaagtgcataccaatggttttatgatggctaccccaccttcggtgagaggccagtcacaactaacatgaattatggacagtgtccgaacaataaaatggggactttttgtatgcgcactgtctcaggtgaagcgtcaggaaagaacatcaccgttcgcattttcatgaggttgaagcacgtgagagcttgggttccacgaccaatccggagtcagttatacctcctgaagaactatccaaattttgataatac----caagattctaaatgcttctcacaacagaacttctat---tacggcaa-------------------------------------atacgggc-----------------------------------------aaatttgggcaacagtccggtgctatatatgtgggaaattacagagtggtgaatagacaccttgctacccataatgactgggccaacttggtttgggaggatagttcaagggacctcctagtgtcatccacgacagctcaaggatgtgacgtcatcgcccgttgcaaatgccagactggagtgtactattgtaattctcggaggaagcactatccagttagcttctcaaaacccagtcttatctttgtagaggctagtgagtactaccctgccagataccaatcccacctcatgcttgctcagggtcactcggaaccaggggattgtggaggtattctcaggtgccaacatggtgttgttggcatagtgtccactggtggcaatggactcgttggctttgctgatgtcagggacctcctgtggttggatgaggaagccatggagcaaggcgtgtccgattacatcaag-ggactcggagatgcattcggaatgggtttcactgatgcagtatccagagaagtggaggccctaaagaatcacctcatagggtctgaaggggctgttgagaagattttgaagaacctaatcaagttaatctcagcactagtgatagtgattaggagtgattatgacatggtcaccctaacggcaactttggccctaattgggtgtcatggaagcccttgggcctggatcaaagccaaaacggcatctattttaggcatccccattgctcagaagcaaagcgcatcctggctcaagaaattcaacgacatggcaaatgctgccaaggggttggaatggatttctaacaaaatcagtaaatttattgattggctcagggaaaagattgtaccagcagccaaggagaaagtggagtttctaaacaacctgaaacagttgcca-ctattggaaaaccaaatttcgaatctagagcaatccgcagcctcacaggaagaccttgaagtaatgtttgggaatgtgtcataccttgccca---------tttttgtcgcaaattccagccactctacgctgtagaagccaaaagaatctacgctttggaaaagaagatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggctctccaggtactggcaaatctttggcgactggaatcattgcccgagcgatagcagataaatatcattctagtgtgtattcactacctccagacccagaccactttgatggttacaaacaacaagtggtcacagtcatggatgacttgtgccaaaaccctgacggtaaggatatgtcgttattctgccagatggtgtccactgtagatttcatcccaccgatggcttccctcgaggagaaaggagtctccttcacatctaaatttgtcatcgcgtccaccaacgccagcaacattatagtgccaacagtgtccgactccgatgccatccgtcgcaggttttacatggactgtgacatagaagtgacggactcatataaaacagatctgggcagattggacgctgggcgagctgcaaaactgtgctctgagaataatacagcaaattttaaacgctgtagtccactagtgtgtggaaaggctatccaactaagagataggaagtccaaggttaggtatagtgtggacacagtggtttctgagctcatgagagagtataacaatagatctgccattggcaacactattgaagccttgttccagggaccgcctaaattcagacccatcaggatc---agccttgaggaaaagccagctccggatgccatcagcgatctccttgctagcgtggacagcgaggaggtacgccaatattgt-agagatcggggttggattattccagacactcccaccaatgtagagcggcatctcaatagagcagtgctagttatgcagtctattgccacagtggtggcagttgtctcactagtgtacgttatctataagctctttgctgggttccaaggtgcgtactctggtgctcccaaacaagtgctcaagaaacccatccttcgtacggcaacagtgcagggtccaagcctcgatttcgctctgtctctactgaggaggaatatcaggcaagtgcaaacagatcaaggacattttaccatgctgggtgttagggaccgtttggctgttctcccacgccactcccaacccggcagagcaatctgggtagagcacaaacttgtgaacattctggacgctgtagaactggtggatgagcaaggggtcaacctagaactaaccctaatcaccctcgacactaatgagaagttcagagacatcactaagttcatcccagagagcatcagtgctgcaagcgatgctaccctagtaatcaacacagaacacatgccctctatgttcgtaccggtgggagacgttgtacaatatggctttctcaaccttagtggaaaaccaacccaccgtaccatgatgtacaactttcccactaaggcagggcaatgcggaggagtggtgacatcagttggaaaggtcatcggtatacacataggtggtaacggtagacaaggattttgcgcaggtctcaagagaagctacttcgccagtgaacaaggagagatccagtgggttaagcccaataaagaaactgggagactcaatatcaatgggccaacacgcaccaagctcgaacccagtgtatttcatgatgtttttgaggggaacaaggagccagcagttctacatagtaaagatccccgtcttgaagtggactttgagcaggctctgttttccaagtacgtaggtaacacactacatgagcctgatgagtacattaaggaggcagctcttcattatgcaaatcagttgaaacagctagatattgatacctcccagatgagtatggaggaagcttgttacggcactgagaaccttgaggctattgatcttcataccagcgcaggctacccatacagtgctctagggataaagaaaagagacatcctagatcctactactagggacgtgagcaagatgaaattttatatggacaagtatggtttggaccttccctactccacttatgttaaggacgagctgcgctcgatagataagatcaagaaagggaaatctcgtctgattgaagccagcagcttgaatgactctgtgtacctcaggatgacttttgggcacctttatgaaaccttccatgcaaaccctggaactgtgaccggctcagccgtggggtgcaatccggacacattctggagcaaactacccatcctactccctggctcactctttgcttttgattactcagggtatgacgctagtcttagccctgtctggttcagggccttggaattagttcttagggaaataggctacagcgaggaagcgatttcacttgttgaggggatcaatcacacacaccatgtgtaccgcaacaaaacttattgtgtgcttggtggtatgccctctggttgttcaggaacatccatattcaattcaatgattaataacattattattagagcattgctcattaaaacattcaagggcattgatctggacgagctcaacatggttgcctatggggatgatgtgcttgctagctacccttttccaattgactgtctagagctagcaaggacaggcaaggagtatggtttgaccatgactcctgcagacaaatccccttgctttaatgaagtcaattgggaaaatgcaacttttctcaagagaggtttcttgcctgatgagcaatttccatttttgattcatcctactatgccaatgaaggagatccacgagtccattcggtggaccaaggatgcacgcaacactcaagaccacgtgcgatccctatgcttattggcgtggcacaacggcaagcaagaatatgacaactttgtgagcacaatcaggtctgtcccagtagggaaagcattggctattccgaattatgagaatctgagacgtaattggctcgagttgtttt-----agaggttaaac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgagtat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-agtagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KF422143.1_Coxsackievirus_A12_strain_QD-HDH507/SD/CHN/2011_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccactcaca-gggcccac-t-gggcgtcagcactctggtacctcggtacctttgtgcgcct-g-ttttata-----ccccc-------ccccatt----------gaaacttagaagc------------gatgcacttc----gatcaa-tagcgggcgtggcacaccagccacgtcgtga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-taacgcggttgagggagaaaacgtccgttacccggccaactgcttcgagaaatc-cagtaacaccatgaaaattgcagagtgtttcgctcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcctgt--------ggggcaa-cccacaggacgctctaatatagacatggtgtg-aagaatctattgagccagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgtgccctcaatcca-gtggg-tggcgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttcc--attt---attcttacattggctgcttatggtgacaattgaa-------agattgttaccatatagctattggattggccatccgg--tgtcgaatagagcgattatc-----tatcag----tttatt-ggatttatcccgt-----tgaatgtgcagcagtatcgc---------------actttgcttttaatagtgagattgaatagtacaaaa-------tgggcgctcaggtatcaacacaaaaatctgggtcccacgagacaagtacttttgcatcag-aaggctctaccataaattttaccaacattaattattataaggattcgtacgccgcatcggctagtagacaggatttcacccaagatccaagtaaatttaccagccccatactagatgcattgagagagacagctccccccttgaagtcacctagtgcggaggcgtgtggttacagtgatcgcgtggcacaactgactgttggcaactcaaccatcactactcaagaagctgctaacattgtgatggggtacggggagtggccggaatattgcgcggacacagacgctacagcagtagacaagcctacccgcccggatgtgtcagtgaatcgcttctacaccctatctgctaagatgtgggacaaaa------------------gttctaaaggatggtattggaagttcccagatctactaacgcaaaagggagtgtttggtcaaaatgcacagtttcactatttgtacagggcaggattctgcatacacgtgcagtgcaatgctagtaagtttcaccaaggagctctgctggttgcagctttgccagagcacgtggtggctggaatgggaccgggagataagccgcaaa---atgcaccgcatccaacctaccaggtcacccagcccggtgctggcgggcaggaactgacacacccttatgtgctggattgtggcatacccattagtcagctcttggtgtgcccccatcagtggatcaacctgcggacaaataattgtgccaccatcataatgccatatactaattcggtgccatacgactcggccattcaccataacaatttcacattatttgtgatcccgatagcaccattgaattatgacacgggagccacaacagccataccaatcactatcacagtcgctccattatgtgccgaattcggaggcctaaggcaagctgtgcaacaaggggtaccgatggagttaaaacccgggtcgaaccaattcctcaccactgacgacgaggtttcagctcccattttacctgggtttaatgcgactcccaacatccatatccctggagaggtgaccaacttacttgaattgtgccaaattgaaactatgctagaggtgaataa----------------tgtcaccgatgtagatggc------atgcagagactcctaataccagtgtccgcgcaaacag------aggcagataagttgtgcgcttcgtttaaagtggacccggggagagatgggccatgggaggccactacagttgggcagatatgtcgatattacacccagtggtctggctctttggaggtgacatttatgttcactgggtcattcatggcaactggcaaaatgctcattgcatataccccacctgggggccaacaaccggccactagggacatagccatgttgggaactcatgtcatttgggattttggcctgcagtcctctgttacactggtgatcccttggataagcaacacccactatagaacagtagagactggagggatcctagactattattctacaggggtggtcactatctggtatcaaacaaactttgtggtcccaaatggggcccctactagtgcatatattattgcaatgggggcagctcaaaagaatttcaccctcaaattgtgccgggacacagaatctatatcccaaacagctatcttgcaaggggacgcc--------gtgagtgacatgatag---aaaactccat-------------------------------------taatcgaattactaacgcaatttctaccactcaaacccaccaaacggcggctgatacgagagttagtaatcacagactgggcacgggtgaggtgccggccttacaagcagcagaaacaggcgctacctctaacgcaactgatgagagcatgattgaaacacgctgcgttgtcaataagcatggagtgagtgagactagtgtggagtacttcttctctcgatcaggcttggcaggtgtcgttgtggtggaggatgcgacagctac----caacaaagggtatgctacatgggagatcgatgttatgggctttgcccagctgcgccgcaagctagagatcttcacatacatgcgctttgacgcagagttcacttttgtggcgacggagcgcaatggaaaaaccagtcctgtcatgttgcagtacatgtttgtacccccaggtgcccccgttccaacagggagggacactttccaatggcagtcagcgacaaacccctcaatactggtgaagatgacagacccccctgctcaagtagcaatccctttcatgtcamcagcaagtgcataccaatggttttatgatggttaccccacctttggtgagaggccagtcacaactaacatgaattatggacagtgcccgaacaacaaaatggggactttttgcatgcgtactgtctcaggtgaagcgtcaggaaagaatgtcaccgttcgcattttcatgaggttgaagcacgtgagagcttgggttccgcgaccaatccggagtcagctatacctcctgaaaaactatccaaattttgataatac----caagattctaaatgcttcccacaacagaacttctat---tacggcga-------------------------------------atacgggc-----------------------------------------aagtttgggcaacagtccggtgccatatatgtgggaaattacagagtggtgaacagacaccttgctacccataacgattgggccaacttggtttgggaggatagctcaagggatcttctagtgtcatccacgacagctcaagggtgcgacgtcatcgcccgttgcaaatgccagactggagtgtactattgtaattctcggaggaagcactatccagttagtttcacaaaacccagtcttatctttgtagaggctagtgagtactatcctgccagataccaatcccacctcatgcttgctcagggccactcagaaccaggggattgtggaggtattctcaggtgccaacatggtgttgttggcatagtgtccactggtggcaatggacttgttggctttgctgatgtcagggacctcctgtggttggatgaggaagccatggagcaaggcgtgtccgattacattaag-ggactcggagatgcattcggaatgggtttcactgatgcagtatccagagaagtggaggccctaaagaatcacctcatagggtctgaaggggctgttgagaagattttgaagaacctaatcaagttaatctcagcactagtgatagtgattaggagtgattatgacatggtcaccctaacggcaactttagccctaattgggtgccatggaagcccttgggcctggatcaaagccaaaacggcatctattttaggcatccccattgctcagaagcaaagcgcatcctggctcaagaaattcaacgacatggcaaatgctgccaaggggttggaatggatatctaacaaaatcagcaaatttattgattggctcaaggaaaagattgtaccagcagccaaggagaaagtggagtttctaaacaacctgaaacagttgcca-ctattggaaaaccaaatttcgaatctagagcaatccgcagcctcacaggaagaccttgaagtaatgtttggaaatgtgtcataccttgccca---------tttttgtcgcaaattccagccactctatgctgtagaagccaaaagaatctacgctttagaaaagaagatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggctctccaggtactggcaaatctttggcgactggtatcattgcccgagcgatagcagataaatatcattctagtgtatattcactacctccagacccagaccactttgatggttataaacaacaagtggtcacagtcatggatgatttgtgccaaaaccctgacggtaaggatatgtcgttattctgccagatggtgtccaccgtagatttcatcccaccgatggcttccctcgaggagaaaggagtctccttcacatctaaatttgtcatcgcgtccaccaacgccagtaacatcatagtgccaacagtgtccgactccgatgccatccgtcgcaggttttacatggactgtgacatagaagtgacggactcatataaaacagacctgggcagactggacgctgggcgagctgcaaaactgtgctctgagaataacacagcaaattttaaacgctgtagtccactagtgtgtggaaaggctatccaactaagagataggaagtccaaggttaggtatagtgtggacacggtggtttctgagctcatgagagagtataacaatagatctgccatcggcaacactattgaagccttgttccaaggaccgcctaaattcagacccatcaggatc---agccttgaggaaaagccagctccggacgccatcagcgatctccttgccagcgtggacagtgaggaggtacgccaatattgt-agagatcggggctggattattccagacactccaaccaatgttgagcggcacctcaatagagcagtgctagttatgcaatccattgccacagtggtggcagttgtctcgctagtgtacgttatctataagctctttgctgggttccaaggtgcgtactctggtgctcccaaacaagtgcttaagaaacccatccttcgtacggcaacagtgcagggtccaagcctcgatttcgctctgtctctactgaggaggaatatcaggcaagtgcaaacagatcaaggacatttcaccatgctgggtgtcagggaccgtttggctgttctcccacgccactcccaacccggtaaaacaatctgggtagagcacaaacttgtgaacattctggacgctgtagaattggtggatgagcaaggggtcaacctagaactaaccctaatcaccctcgacactaatgagaagttcagagacatcactaagttcatcccagagagcatcagtgctgcaagcgatgccaccctagtaatcaacacagaacacatgccctctatgttcgtgccggtgggagacgttgtacaatatggctttctcaaccttagtggaaaaccaacccaccgtaccatgatgtacaactttcccaccaaggcagggcaatgcggaggagtggttacatcagttggaaaggtcatcggtatacacattggtggcaacggtagacaaggattttgtgcaggtctcaagagaagctacttcgccagtgagcaaggagagatccagtgggttaaacccaacaaagaaactgggagactcaatatcaatgggccaactcgcaccaagctcgaacccagtgtatttcatgatgtttttgagggaaacaaggagccagcagttctacatagtaaagatccccgtcttgaagtggactttgagcaggctctgttttccaagtacgtgggcaacacactacatgagcctgatgagtacattaaggaggcagctcttcattatgcaaatcagttgaaacagctagatatcgacacctcccagatgagtatggaggaagcttgttacggcactgaaaaccttgaggctattgatcttcataccagcgcaggctacccgtacagtgctctagggataaagaaaagagacatcctagatcctactactagggacgtgagcaagatgaaattttatatggacaagtatggtttggaccttccctactccacctatgtcaaggacgagctgcgctcgatagataagatcaagaaagggaaatctcgtctgattgaagccagcagcttgaatgactctgtgtaccttaggatgacttttgggcacctttatgaaactttccatgcaaaccctggaactgtgaccggctcagccgtggggtgcaatccggacacattctggagcaaactacccatcctactccctggctcactctttgcttttgattactcagggtatgacgctagtcttagccctgtctggttcagggccttggagttagttcttagggaagtaggctacagcgaggaagcagtttcacttgttgaggggatcaatcacacacaccatgtgtaccgcaacaaaacttattgtgtgcttggtggtatgccctctggttgttcaggaacatccatatttaattcaatgatcaataacattattattagagcattgctcatcaaaacattcaagggcattgatctggatgagctcaacatggttgcctatggggatgatgtgcttgctagttacccttttccaattgactgcctagagctagcaaggacaggcaaggagtatggtttgaccatgactcctgcagacaaatccccttgctttaatgaagtcaattgggaaaatgcaacttttctcaagagaggtttcttgcctgatgagcaatttccatttttgattcatcctactatgccaatgaaggagatccacgagtccattcggtggaccaaggatgcacgcaacactcaagaccacgtgcgatccctatgcttattggcgtggcacaatggcaagcaagaatatgacaactttgtgagcacaatcaggtctgtcccagtaggaaaagcattggctatcccgaattatgagagtctgagacgtaattggctcgagttgtttt-----agaggttgaac-------------------------acac---------------ctcaaccc-caccagaa----atctggt------c-g-----tgaatat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-agtagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KU761262.1_Coxsackievirus_A5_strain_CVA5/13164/HUN/2015_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactctggtactacggtacccttgtgcgcct-g-ttttatc-----ttcccaaa----ccccgt------aacg-ctacactagaagttagacact-gt---------------gaccaa-tagtcagtggggcaacccagccccacttcgg-tcaagtacctctg-tttccccgggtctagtaccaataggctgc-ttacgcggctgaaggggagcgcgcccgttatccggctaactacttcgagaaacc-tagtaccaccatggaagttgcagagtgtttcgctcagca--caa-cccca---gtgtagatcaggtcgatgagtcaccgta-caccccacgggcgaccgtgacggtggctgcgttggcggcctgcccat--------ggtgcac-accatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcatgtgctctcaaccca-gaggg-tagcatgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgaa-------agattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattgta-----tattct----tttgtt-ggctttgtgccat-----tagatta--------------tacggcaactggt-actttaagatacattcagcttttgaacacagcaaaa-------tgggagtccatgtgtcaacaaccaaaaccgggtctcatgcaaatggaaacatatcgacag-ggggctcaacaataaattaccacaatattaactattatagggactcctattcagcagcctccacacggcaggaattcactcaagatcctaacaaatttactagtcctgttttagatgcattaagggaagtcgcacctccactgaagtccccgtcagcagaagcgtgtggttacagtgatagggtggcacaactcacagttggcaactccaccatcactactcaggaggctgccaacataattgtgggatatggtgaatggccagaatactgccctgatgtcgacgcaaccgccgttgacaagcccacgagaccagacgtgtcagtcaatcgattctacaccctatcagccaaaatgtggcaaaaag------------------aatcgaagggttggtattggaagtttcctgatatcctcactgaaaagggagtgtttggacaaaatgctcagtttcattatttatatagatcaggtttctgtgtccatgtccagtgtaatgccagtaagtttcatcaaggtgcactccttgttgcactcatgcctgagcatgtggttgctggtatgggtgctggagacaaaccctcaa---cagctccgcatcctgactttaaagctacgcaacccggacctgatggcgctgagctgcaacacccctatgtcttagattgcggggtccccataagccagctactgatatgcccgcatcagtggatcaacctcaggaccaataattgtgctacaatcataatgccttatatcaacagcgtgccctacgattcggccattaatcattgtaacttcccattgtttgttattcccgtgagtccattgaattatgacgcaggcgctacggcagccataccaatcacagtaactgtcgcgccactgtgcgcggagttggggggtttgcgtcaagcagtctctcaaggcttgccagtagaaataaagcccggatcttaccaattcctgaccacggatgatgaagtgtccgctccaatattaccaggatttcaaccgaccccagagattcacattccaggtgaagttaggaatttgctagaactgtgccaagttgagacaatcctagaggttaacaa----------------tactacagatactcatggt------atgtctaggttactgatccctgtgtctgcacagacag------ctgctgataagttgtgcgcatcattcagagttgaccccgggcgaagcggaccgtgggagtctacactcctgggtcagatctgtaggtattacactcaatggtcaggctcactggaagtgacatttatgtttacgggctcctttatggccacaggtaaaatgctcatagcctatacaccacctggaggagagcagcccaagacacgtgatgtggccatgctgggcacccatgtaatttgggatttcggactccaatcctcggtcaccttagtcatcccctggatcagcaattcacattatagaacggtggagactggtggtatactcgattactactccacagggatagtaaccatttggtatcaaactaatttcgtcgtacctactggggcacccaccagtgcctacatcatagccctcggagcagctcaaaagaacttcacacttaagttgtgcagggacactgagtccatttcccagactgctatactacagggtgacccg--------attgctgacataatag---aaggagcagt--------------------------gacccagaccactaatagggcaattagtggatcgattcaacca--------gtaacagctgctaatactcagcccagttcacatcggctcgggacagggcaggtaccagctctgcaagcggcggaaacaggagcaacttcaaacgccactgatgagagtatgattgaaaccaggtgtgtggtcaacaggcatggggttatggaaacaagtgttgaacacttcttttctcgctcgggcctagcaggaatcttgataattgaggactctgggacctc----cacaaaggggtacgccacttgggaaatcgacgtgatgggatttgtccaattgagacgcaagctggaaatgttcacgtacatgcgatttgacgcggagttcacctttatcaccgcggaaaggaacggtaacaccagtccgatacccgttcaatacatgtatgttccaccaggagctcctgtccccaccggtagggacacattccagtggcaaacagcaacaaacccgtcagtgatttcgaaaatgacagacccaccagctcaggtgtcagtaccattcatgagcccagctagcacttatcaatggttttatgatggctatcctacattcggggaagtcccggtcaccaccaatctaaattatgggcagtgccccaataacaagatgggcactttctgcattcgcatggtgtcaggagtgtcaacgggcaaagacgtcactgtgcgcatttttatgaaactgaagcacgtgcgcgcttgggtgcctagacccatcaggagtcagccctacttgttgaagaactacccaaattttgataaggc----aaatattgcagatgcttcatccaatagaactagcat---aaccac---------------------------------------tactggg------------------------------------------agatttgggcaacagtcaggagctatatatgtgggaaattacagagtggtcaatcgccacttggccacacacaatgattggaccaatctggtgtgggaagacagttcaagggaccttctagtctcctccaccactgcacaggggtgtgacactattgcccggtgtaattgccaaaccggggtgtactactgcaactctaagagaaagcactacccagttagtttcacaaaacctagtcttatctttgtggaggccaatgagtattatcctgctaggtatcaatcccacctcatgcttgcagaaggtcactctgaaccaggagactgcggaggcatcctcaggtgccaacatggagttgttgggatagtgtcaactggtggcaatggcctggtaggatttgccagtgttagagatctcctatggttagatgaggaagctatggaacagggtgtgtccgattacatcaag-ggactgggcgatgcctttggcacgggcttcaccgatgctgtatccagagaagtggaagctctaaagaatcacttgattggctcagaaggtgcagtggaaaaaattctaaagaatttggtgaagctcatctcagctctagtcatagttattaggagtgattatgatatggtcacccttactgcaacccttgccctgattggatgccacggaagtccatgggcgtggattaagtcaaaaacagcatccattttgggcatccccatggcacagaaacagagtgcatcttggttgaagaaattcaatgacatggcaaacgctgcaaaaggattggagtggatctccaacaaaatcagcaaatttattgattggcttaaagagaagatcatcccagccgcgaaagagaaagtcgagttcttgagcaacctcaagcaattgtct-ttattggagaaccaaattgctaacttagaacaatccgccgcttcacaggaagatcttgaagctatgtttgggaatgtgtcatatctggccca---------cttctgccgcaaattccaacctctttatgcaactgaagcaaggagagtctatgccctagagaaaagaatgaataattacatgcagttcaagagcaaacaccgtattgaacctgtgtgcttaattattagaggttcgccaggaacaggcaaatcacttgccacgggcattattgcaagggcaattgccgataaataccactccagtgtgtactctctaccgccggacccagatcatttcgacgggtacaagcaacaggtggtcacagttatggacgacttgtgtcaaaaccccgatggcaaggacatgtcattgttttgccaaatggtatccacggttgacttcatccctccaatggcctcactggaggagaaaggtgtgtccttcacctctaagtttgtcatcgcttcaaccaatgccagcaacatcattgtcccgacagtctcggattccgatgcaattcgcaggagattctttatggactgcgacattgaggtgaccgactctttcaaaacagaccttggacgcttagacgcaggcagggctgcaaaactatgctcggaaaacaacactgccaacttcaagaggtgtagtccgttagtgtgcggcaaagccatccaattaagggacaggaagtccaaggtcaggtacagtgttgatactgtggtgtcggaactgatcagggagtacaatagtaggtctgccatagggaacactatagaagcactatttcagggaccacccaagtttaggccaataagaatc---agtcttgaagagaagcctgctccggatgccatcagtgatttgttagctagcgttgacagtgaagaggttcgtcagtattgc-agggaccaagggtggataattccggaaacaccaactaatgtggagcgacacctcaacagagcagtgttagtgatgcaatccatagctactgtagttgcggttgtgtctcttgtctatgtcatctataagctgtttgctggtttccagggtgcgtattctggagcgcccaagcaaaccctcaagaagcctatgttgagaacagctacagtccaggggcccagtttggactttgctttgtctcttttgagacgcaatatcaggcaggcgcaaactgaccatggacacttcaccatgctcggggtgcgcgaccgccttgccatcttgcctcgccattcgcaaccaggaaaaaccatctgggttgaacacaagctggttaatgtgcttgacgctgttgagttggtggatgagcaaggcgttaacttggaacttacgctagtgaccctagacaccaacgaaaagtttagagatatcaccaaatttatcccagagaacatcagtggtgccagtgatgcgactttggtgattaacaccgagcacatgccatcaatgtttgtcccggtaggagacgttgtacaatatgggttcttaaacctcagtggtaagccaacccatagaactatgatgtacaatttccccacaaaggctggacagtgcgggggcgtggtcacgtcagttggcaagattattggtatccacattgggggcaatgggcggcaaggtttctgcgctggtctgaagaggagctacttcgctagtgagcaaggtgagatccagtgggtaaaacccaacaaggagactggtaggttgaacatcaatggaccaacacgcactaagttagaacctagcgtgttccatgatgtgttcgaaggcaacaaagaaccagcagtcttaacaaacaaagatcctagactggaagtcgactttgaacaagctctgttctccaagtacgtgggcaatgttctccatgaacctgatgagtatgtgcagcaagccgctctccattatgcaaatcagcttaagcaactggatataaacactaacaaaatgagcatggaagaggcgtgttacggcacagaaaatttggaagctattgatcttcatactagtgctgggtacccttacagtgctttgggtataaagaagagggacatcttggatcctgctactagagatgtgtcaaagatgaaattttacatggacaagtacggcttggacttaccctactccacctacgtgaaagatgaactcaggtccctagataaaattaagaaagggaaatcccgcctgatagaagctagtagtctgaacgactcagtgtaccttagaatgacttttggccacctatatgaagtgtttcatgccaacccagggacagtgacagggtcagcagtcgggtgtaacccggacgtgttttggagcaaacttccaatcttgctgccaggttcattatttgcttttgactattcaggatatgatgctagtcttagtcctgtctggtttagggctctggagatggtcttgcgggacattggttattcagaagaggcagtatcactcatagaagggataaaccacacacaccatgtgtaccgaaacaagacttactgtgtcctcggtgggatgccatcagggtgctcgggcacttctatctttaattcaatgatcaataacattataatcagaactctcttgatcaaaacttttaaggggatagacttggatgagctaaatatggtggcttatggagatgatgtgctagccagctaccccttccccatcgactgtctagaactggccaagactggcaaggaatatggactaaccatgacacctgcagacaaatcaccttgcttcaatgaagtgacatgggagaacgccaccttcttgaagagagggtttttgcctgaccaccagttcccattcttgattcaccccacaatgcccatgaaagaaatccacgaatccatacggtggactaaggacgcacgtaatactcaagatcacgtgcgttctttgtgcctattggcttggcataacggtaaggatgagtatgaaaaatttgtgagcacaattagatcagttccagttggaaaagcattggcgattccaaattttgagaacttgaggagaaattggctcgaattgtttt--aa-atttacagttt-------------------------gtga---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289362.1_Coxsackievirus_A5_isolate_CV-A5/P74/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggtgctagcactctggtaccacggtacctttgtgcgcct-g-ttttatc-----tccccaaac---ccccgt------aacg-ctacactagaagatagacaat-ac---------------gaccga-tagccagtggggcaacccagcctcactttgg-tcaagcacctctg-ttttcccgggcttagtaccaataggctgc-tcgcgcggctgaaggggaacgcgctcgttatccggctaactacttcgagaaacc-tagtaccaccatggaagttgcagagtgtttcgctcagca--caa-cccca---gtgtagatcaggccgatgagtcaccgtg-caccccacgggcgaccgtgacggtggctgcgttggcggcctgcccat--------ggtgtac-accatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgcgctctcaaccca-gagag-tagcgtgtcgtaacgggcaactccgcagcggaaccgactactttgggtgtccgtgtttct--cttt---attcttacatcggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccgg--tgtgtaatagagctatcata-----tattct----tttgtt-ggtttcgtgccac-----tagatta--------------tattgcaattatt-actttaaggtacatcttgcttctgaacacagcaaaa-------tgggagcgcaggtgtcaacaaccaaaaccgggtctcatgaaaatggaaatattgcgacag-ggggctctacaataaattacaccaacatcaactattatagggactcctatgctgcagctgctacacggcaggacttcactcaagatcctaataaatttactagccctgtcttagacgcattaagggaagttgcacctccactgaaatccccttctgcagaagcgtgcggttacagtgacagggttgctcaactcacagttggcaactccaccatcaccacccaggaggctgccaacataattgtgggatatggtgagtggccagaatactgccctgatgttgatgcaactgccgttgacaagcccacgagaccagacgtgtcagtcaatcgattttacaccctatcagccaaaatgtggcaaaaag------------------aatcaaagggttggtattggaagtttcctgatatcctcactgaaaagggagtatttggacaaaatgcccagtttcattatttatatagatcgggattctgtgtccatgtccaatgcaatgctagtaaattccatcaaggtgcactccttgttgcactcatgcctgagcatgtggttgctggcatgggtgctggagataaaccctcaa---cagctccgcatcctgactataaagccacgcaacccggacctgacggtgctgagctgcaatacccctatgtcttagattgcggggtacctataagccaactactgatatgccctcaccaatggattaacctcaggaccaacaattgtgctacaatcataatgccttacatcaacagcgtgccctacgattcggccattaatcattgcaacttcacattgttcgtcattcccgtgagtccattgaattatgacgcaggcgccacggcagctataccgatcacagtaactgtcgcgccactgtgcgcggagtttgggggtttgcgtcaagcagtctctcaaggcttgccagtggagataaagcctgggtcttatcaattcctgactacagacgatgaggtctctgccccaatactgccaggattccaacctaccccggaaatccacattccaggcgaagtcagaaacttgctagagttgtgccaagttgagacaatcctagaggttaacaa----------------cactactgacactcatggt------atgtctaggttactgatccctgtgtctgcacaaacag------ccgctgataaactgtgtgcatcattcagagttgaccccgggcgaagcggcccgtgggaatctacactcctgggccagatctgcaggtattacacacaatggtctggttcactcgaagtgacattcatgtttacaggctcctttatggctacgggcaagatgctcatagcctacacaccacccggtggagaacaacctaagacacgtgatgtggccatgttgggcacccatgtgatttgggactttgggctccagtcctcggtcaccttggtcatcccttggatcagcaattcacactatagaacagtggagactggcggcatactcgattactattccacagggatagtaaccatctggtatcaaaccaatttcgtcgtgcctaccggggcacccaccagtgcttatatcatagcccttggagcagctcaaaagaatttcacgcttaagttgtgcagggataccgaatctatctctcagactgccatactacagggtgatccg--------attgctgacataatag---aaggagcagt--------------------------gacccagactactaacagagcaataagtggatcgattcaacca--------gtgacagctgctaacactcagcccagttcacatcggcttgggacagggcaggtaccagcactgcaagcggcggagacaggagcaacttcaaacgccaccgatgagagcatgattgaaaccaggtgtgtggtcaacaggcatggggtcatggaaacaagtattgagcactttttctctcgttcgggcctagcaggaatcttgataattgaggattctggaacctc----tacaaaggggtatgccacttgggaaattgatgtgatgggatttgtccaattgagacgcaagctggaaatgttcacatacatgcgatttgacgcagagttcacctttatcactgcagaaaggaacggtaacaccagtccgatacccgtccaatacatgtatgttccacccggggctcctgtccccactggtagggacacgtttcagtggcaaacagcaacgaacccatcagtgatttcgaagatgacagacccgccagctcaagtgtcagtaccatttatgagtccagctagcacctaccaatggttttatgatggatatcctacattcggggaggtcccggtcactaccaatctaaattacgggcagtgccccaacaataaaatgggtactttctgcattcgcatggtgtcaggagtatcaacgggcaaagatgtcacggtgcgcatttttatgaagctgaagcacgtgcgcgcttgggtacctagacccatcaggagtcagccctacttgttgaagaactacccaaactttgataaggc----aaatattgcggacgcttcatctaataggactagcat---taccac---------------------------------------cactggg------------------------------------------aaatttgggcaacaatcaggagctatatatgtgggaaattacagagtggtcaatcgccacttggccacacacaatgattggaccaacttggtgtgggaagacagttcgagagaccttctagtctcctccaccactgcacaggggtgtgacaccatcgctcggtgcaattgtcagaccggagtgtactactgcaattccaagagaaagcactacccagttagtttctcaaaacccagcctcattttcgtggaggccaacgagtattaccctgccaggtatcaatcccacctcatgcttgcagaaggccactctgaaccaggagattgtgggggcattcttaggtgccaacatggagttgttgggatagtgtcaactggtggcaatggcctagtagggtttgccagcgttagagatctcctatggttagatgaggaagccatggaacaaggcgtgtccgattacatcaag-ggactaggcgatgccttcggcacgggcttcaccgacgctgtatctagagaagtggaagccctaaagaatcacttgattggctcagaaggtgcagtagaaaaaattctaaagaatttggtaaagctcatttcagctctagtcatagttattaggagcgactatgatatggtcacgcttaccgcaacccttgccctaattggatgtcacggaagcccatgggcatggattaagtcaaaaacagcatccattttgggcattcccatggcacagaaacagagtgcatcttggttgaagaagttcaatgacatggcaaacgctgcaaaaggattggagtggatctccaacaaaatcagcaagtttattgattggcttaaagagaagatcatcccagccgcgagggagaaagtcgagttcctgagcaaccttaagcaattgcct-ttactggagaatcaaatttccaatttggaacaatctgccgcttcacaggaagatcttgaagccatgttcgggaatgtgtcatatctggctca---------cttctgccgtaagtttcagcctctttatgcaactgaggcaaaaagggtttacgccctggaaaaaagaatgaataattatatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattattagaggctcaccaggaacaggcaaatcactagcgacaggcattattgcaagggcaattgccgataaataccactccagtgtgtactctctaccaccggacccagatcatttcgacgggtacaagcagcaggtggttacggttatggacgacttgtgtcaaaaccctgacggtaaggacatgtcactgttttgtcaaatggtgtccacggttgactttattcctccaatggcttcactggaagagaaaggagtgtccttcacctccaaatttgttatcgcctcaaccaatgccagcaacattattgttccgacggtctcagattctgatgcaattcgcagaagattctttatggactgcgacattgaggtgactgactcttacaaaacagaccttggacgtttggacgcaggcagggctgcaaaactttgttcggagaacaacaccgccaacttcaagaagtgtagtccgctggtgtgcggcaaagctatccagttaagggacaggaagtccaaggttaggtacagtgttgatactgtggtgtcagaattaatcagagagttcaatagcaggtctgccatagggaacaccatagaagcactatttcaggggccacccaagtttaggccaataagaatc---ggtcttgaagagaagcctgctccagatgctatcagtgacttgctagccagtgttgatagcgaagaggttcgacagtattgc-agggaaccaaggtggataattccggaagcaccaactaatgtggagcgacaccctcacagagcagtgttagtgatgcaatccatagccactgtagttgcggttgtgtctcttgtctacgtcatctataagctgttcgctggtttccagggcgcgtattctggagcgcccaaacaaatcctcaagaagcctgtgttgagaacagccacagtccaagggcccagtttagacttcgctttgtcccttttgagacgcaatatcaggcaggcgcaaactgaccagggacacttcaccatgctcggagtgcgtgaccgtctcgccatcctgccccgtcattcgcaaccaggaaagaccatctgggtcgaacacaagctggttaatgtgcttgatgctgttgaactggtggatgagcagggtgttaacttggaacttacgctggtgaccctagacaccaacgagaagtttagagacatcaccaaattcattccagagaacatcagtggtgccagtgatgcaactttggtaattaacaccgagcacatgccatcaatgtttgtcccgataggagatgttgtgcaatatggattcctaaacctaagtggtaagccaacccacagaaccatgatgtacaactttcccacaaaggctgggcagtgcgggggcgtggtcacgtcaattggtaagattattggtatccacattgggggcaatggacgccaaggtttctgtgctggtctgaagaggagctactttgctagtgagcaaggcgagatccagtgggtgaaatctaacaaggaaactggtagaatgaacgttaatggaccaacacgcactaagctagaacccagtgtgttccatgatgtgtttgagggcagcaaagaaccagcagttttaacaaataaagatcctagactagaagtcgactttgagcaagctctgttctccaaatacgtgggcaatgttctacacgagcctgacgagtatgtgcagcaagctgccctccactatgcaaaccagctcaaacaactggatataaataccaacaaaatgagtatggaggaggcgtgttacggcacggagaacttggaagccattgaccttcgtactagtgctgggtacccttacagtgctctgggtataaagaagagggacatcttggatcctaccactagagatgtatcaaagatgaagttttacatggacaagtacggcttagacctaccctactccacctacgtgaaagatgaactcaggtccctagacaaaattaagaaggggaaatcccgcctgatagaagctagcagtctgaatgactcggtgtacctcagaatgacttttggccacctttatgaagtgttccatgccaacccagggacagtgacagggtcagcagtcgggtgcaacccggacacgttttggagcaaactcccaatcttgctgcctggctcattgtttgcctttgactactcaggatatgatgctagccttagtcccgtctggtttagagctttggagatggtcttgcgggacattggttattcagaggaggcagtatcactcatagaaggaataaaccacacacaccatgtataccggaacaagacatactgcgtcctcggtgggatgccatcagggtgctcaggcacttccatctttaattcaatgattaacaacattataatcagaaccctcttgatcaaaactttcaaagggatagatttagatgagctaaatatggtggcttatggagatgatgtgttagccagttacccctttcccatcgactgtctagaactagccaagactggtaaagagtatggcctgaccatgacacctgcagacaaatcaccttgcttcaacgaagtgacgtgggaaaacgccacctttttgaaaagggggtttttgccagaccaccagttcccattcttgatccaccccacgatgcccatgaaagaaatccacgaatccatacggtggactaaggacgcgcgcaacactcaagatcatgtgcgctctctgtgcttattggcttggcataatggtaaggatgagtatgaaaattttgtgagcacaattagatcagttccagttggaaaagcattggcaattccaaactttgagaatttgaggaggaattggctcgaattgtttt--aa-atttacagttt-------------------------ataa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gcgggggtaaatttgt-ta-taacc-a-g-agtagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289363.1_Coxsackievirus_A5_isolate_CV-A5/P836/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactctggtactgcggtacctttgtgcgcct-g-ttttatc-----tccccagac---ccccgc------aacg-tcacattagaagatagacaat-ac---------------gaccaa-tagtcagtggggcaacccagcctcactttgg-tcaagtacctctg-tttccccgggcttagtaccaataggctgc-ttgcgcggctgaaggggaacgcgcccgttatccggctaactacttcgagaaacc-tagtaccaccatggaagttgccgagtgtttcgctcagca--caa-cccca---gtgtagatcaggtcgatgagtcaccgta-caccccacgggcgaccgtgacggtggctgcgttggcggcctgcccat--------ggtgcac-accatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgtggagcatgcgctctcaaccca-gagag-tagcgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttct--cttt---attcttacattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccgg--tgtgcaacagagctatcata-----tattct----tttgtt-ggctttgtaccac-----tagatta--------------tactgcaattatt-gctttaaggtacatcttgcttttgaacacagcaaaa-------tgggagcgcaggtgtcaacaaccaagaccggatctcatgaaaatggaaacattgcgacag-ggggctctacaataaattacaccaatatcaattattatagagactcctacgctgcagctgctactcggcaggacttcactcaagatcctaataaatttaccagtcctgttttagatgcattaagggaagttgcacctccactgaaatccccctcagcagaagcgtgcggttacagcgacagggtggcacaactcacagttggcaactccaccatcaccactcaggaggctgccaacataatcgtgggatatggtgaatggccagaatactgccccgatgttgatgcaactgccgttgacaagcccacgagaccagacgtgtcagttaatcgattctacaccctatcagccaaaatgtggcaaaaag------------------aatcaaagggttggtattggaagtttcctgatatcctcactgaaaagggagtttttggacaaaatgcccagtttcattatttgtatagatcgggtttctgtgtccatgtccaatgcaatgctagcaagttccatcaaggtgcactccttgttgcactcatgcccgaacatgtggttgctggtatgggtgctggagataaaccctcaa---cagctccgcatcctgactataaagccacgcaacccggacctgatggtgccgagctacaatacccctatgtcttagattgcggggtccctataagtcagctactaatatgccctcatcaatggattaacctcaggaccaacaattgtgctacaatcataatgccttacatcaacagcgtgccctacgattcggccattaatcattgtaacttcacattgttcgtcattcccgtgagcccactgaattatgacgcaggtgccacggcagctataccaatcacagtaactgtcgcaccactgtgcgcggagtttgggggtttgcgtcaagcagtctctcaaggcttgccagtagagataaagcctgggtcttatcaattcctgactacagatgatgaggtctctgccccaatattgccaggatttcaacctaccccggagatccacattccaggcgaagtcaggaacttgctagaattgtgccaagttgagacaatcctagaggtcaacaa----------------cactactgacactcatggt------atgtctaggttactgatccctgtgtctgcacaaacag------ctgctgataaactgtgtgcatcattcagagttgaccccgggcggagcggcccgtgggaatctacactcctgggccagatctgtaggtattacacacaatggtctggttcactcgaagtgacattcatgttcacgggctcctttatggctacgggcaagatgctcatagcctacacaccacccggcggagaacaacccaagacacgtgatgtggccatgctgggcacccatgtgatttgggactttggactccagtcctcggtcaccttggtcatcccttggatcagcaattcacattatagaacagtggagactggtggtatactcgattactattccacagggatagtgaccatctggtatcaaaccaatttcgtcgtgcctaccggggcacccaccagtgcttatatcatagcccttggagcagctcaaaagaatttcacgcttaagttgtgcagggatactgagtctatctctcagactgccatactacagggtgatccg--------attgctgatataatag---aaggggcagt--------------------------ggcccagaccactaacagagcaataagtggatcgattcaacca--------gtgacagctgctaacactcagtccagttcacaccggcttgggacagggcaggtgccagctctgcaagcggcggagacaggagcaacttcaaacgccaccgatgagagcatgattgaaaccagatgtgtggtcaacaggcatggggttatggagacaagtgttgagcactttttctctcgttcgggcctggcaggaatcttgataattgaggactctggaacctc----tacaaagggttatgccacttgggagattgatgtgatgggatttgtccaattgagacgcaagttggaaatgtttacatacatgcgatttgacgcagagttcacctttattactgcggaaaggaacggtaacaccagtccgatacccgtccaatacatgtatgttccacccggggctcctgtccccaccggtagggacacatttcagtggcaaacagcaacaaacccatcagtgatttcgaagatgacagacccgccagctcaagtgtcagtaccattcatgagtccagctagcacctaccaatggttttatgatggttatcctacattcggggaggtcccggccactaccaatctaaattacggacagtgccccaacaataaaatgggtactttctgcatccgcatggtgtcaggagtgtcaacgggcaaagatgtcacggtgcgcatttttatgaagctgaagcatgtacgcgcttgggtacctagacccatcaggagtcagccctacttgttgaagaactacccaaattttgataagac----aaatattgtagacgcttcatctaataggactagcat---aaccac---------------------------------------cactggt------------------------------------------aaatttgggcaacagtcaggagctatatatgtgggaagttacagagtggtcaatcgccacttagccacacacaatgattgggccaatttggtgtgggaagacagttcaagagacctgctagtctcctccaccaccgcacaggggtgtgacaccattgctcggtgcaattgccaaaccggagtgtattactgcaattctaagagaaagcactacccggtcagtttctcaaaacccagcctcattttcgtggaggccaacgagtactaccctgccaggtatcaatcccaccttatgcttgcagaaggtcactctgaaccaggagactgtgggggcattctcaggtgccaacatggagttgttgggatagtgtcaactggtggcaacggcctagtagggtttgccagcgttagagatctcctatggttagatgaggaagccatggaacagggcgtgtccgattacatcaag-ggactaggcgatgccttcggcacaggcttcaccgacgctgtatctagagaagtggaagctttaaagaatcacttaattggctcagaaggtgcagtggaaaaaattctaaagaatttggtaaagctcatttcagctctagtcatagttattaggagcgactatgatatggtcactcttactgcaacccttgccctgattggatgtcacggaagtccatgggcatggattaagtcaaaaacagcatccatcttgggtattcccatggcacagaaacagagtgcatcttggttgaagaagttcaacgacatggcaaacgctgcaaaaggattggagtggatctccaacaaaattagcaagtttattgattggcttaaagagaagatcatcccagccgcgagggagaaagtcgaattcctgagcaatcttaagcaattgcct-ctactggagaatcaaatttccaacttggaacaatctgccgcttcacaggaagatcttgaagccatgttcgggaatgtgtcatatctggccca---------cttttgccgtaagttccagcctctttatgcaactgaggcaaaaagggtttacgccctggaaaaaagaatgaataattatatgcagttcaagagcaaacaccgtattgaacctgtatgtttaattattagaggctcaccaggaacaggcaaatcactagcgacaggcattattgcaagagcaattgccgataaataccactccagtgtgtactctctaccaccagacccagatcatttcgacgggtacaagcagcaggtggttacagttatggacgacttgtgccaaaatcctgacggtaaggacatgtcattgttttgccaaatggtgtccacggttgacttcattcctccaatggcttcactggaagagaaaggtgtgtccttcacctccaaatttgttatcgcttcaaccaatgccagtaacatcattgttccgacagtctcagattccgatgcaattcgcagaagattctttatggactgcgacattgaggtgactgactcttacaaaacagaccttggacgcttggacgcaggcagggctgcaaaactttgttcggagaacaacaccgccaacttcaagaagtgtagtccgctggtgtgcggtaaagccatccaattaagggacaggaagtccaaggttaggtacagtgttgacactgtggtatcagaattaattagggagtacaatagcaggtccgccatagggaacaccatagaagcactatttcaggggccacccaagtttaggccaataagaatc---agtcttgaagagaagcctgctccggatgctatcagtgacttgctagctagtgttgacagcgaggaggttcgacagtactgc-agggaccaagggtggataattccggaaacaccaactaatgtggagcgacacctcaatagagcagtgttagtaatgcaatccatagccactgtagttgcagttgtatctcttgtctatgtcatctataagctgttcgctggtttccagggcgcgtattctggagcgcccaaacaaactctcaagaagcctgtgttgagaacagccacagtccaagggcctagcttagactttgctttgtcccttctaagacgcaatatcaggcaggcgcaaactgaccagggacatttcaccatgctcggagtgcgtgaccgcatcgccatcctgccccgtcactcgcaaccaggaaagaccatctgggtcgagcacaaactagttaatgtgctggatgctgttgaactagtggatgagcagggtgttaacttggaactcacgctagtgaccctagacaccaacgagaagtttagagacatcaccaaatttattccagagaacatcagtggtgccagtgatgcaactttggtgattaacaccgagcacatgccgtcaatgtttgttccgataggggatgttgtgcagtatggattcctaaacctcagtggcaggccaacccacagaaccatgatgtacaattttcccacaaaggctggacagtgcgggggcgtggtcacgtcaattggcaagattattggtatccacattggaggcaatggacgccaaggtttctgtgctggtctgaagaggagctattttgctagtgagcaaggtgagatccagtgggtgaaacctaacaaggagactggtagattgaacattaatgggccaacacgcactaagctagaacctagcgtgttccatgatgtgtttgagggcagcaaagagccagcagttttaacaaataaagatcctagactagaagtcgactttgagcaagccctgttctccaagtacgtgggcaatgttctacacgagcctgatgagtatgtgcagcaagctgctcttcactatgcaaaccagctcaaacaattggatataaataccaacaaaatgagtatggaggaggcgtgttacggcacggagaacttggaagccattgacctccatactagtgctgggtacccttacagtgccctgggtataaagaagagggacatcttggatcctaccactagagatgtttcaaagatgaagttttacatggacaagtatggcttagacctaccctattccacctacgtgaaagatgaactcaggtccctagacaaaatcaagaaggggaaatcccgcctgatagaagctagtagtctgaatgactcggtgtacctcagaatgacttttggccacctttatgaagtgttccatgccaatccagggacagtgacagggtcagcagtcgggtgcaacccggacacgttttggagcaaactcccaatcttgctgcctggttcattatttgcctttgactactcagggtatgatgctagccttagtcccgtctggtttagagctttggagatggtcttacgggatattggttatccagaggaggcggtatcactcatagaagggataaaccacacacaccatgtataccggaacaagacatactgcgtcctcggtgggatgccatcagggtgctcaggcacttccatctttaattcaatgattaacaacattataatcaggacccttttgattaaaactttcaaagggatagatttagatgagctaaatatggtggcttatggagatgatgtgttggccagctacccctttcccatcgactgtctagaactagccaagactggtaaagagtatggcctgaccatgacacctgcagacaaatcaccttgcttcaatgaagtgacgtgggagaatgccacctttttgaagagggggtttttaccagaccaccagttcccgttcttgatccaccccacaatgcccatgaaagagatccacgaatctatacggtggactaaggatgctcgcaacactcaagatcatgtgcgctctctgtgcttattggcttggcataatggcaaggatgagtatgagaaatttgtgagcacaattagatcaattccagttggaaaagcattggcaattccaaactttgagaatttgaggaggaattggctcgaattgtttt--ga-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-agtagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KP289364.1_Coxsackievirus_A5_isolate_CV-A5/P99/2013/China_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactctggcaccacggtacctttgtgcgcct-g-ttttatc-----tccccagac---ccccgc------aacg-ttacattagaagatagacaat-gc---------------gaccaa-tagccagtggggcaatccagcctcactttgg-tcaagtacctctg-tttccccgggcttagtaccaataggctgc-ttgcgcggctgaaggggaacgcgcccgttacccggctaactacttcgagaaacc-tagtaccaccatggaagttgacgagtgtttcgctcaaca--caa-cccca---gtgtagatcaggtcgatgagtcaccgta-caccccacgggcgaccgtgacggtggctgcgttggcggcctgcccat--------ggtgcac-accatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgtggagcatgcgctctcaaccca-gagag-tagcgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttgccatatagctattggattggccatccag--tgtgtaatagagctattgtg-----tattct----tttgtt-ggctttgtgccat-----tagatta--------------tactgcagttgct-actttaagatacatcttgtttctgaacacagcaaaa-------tgggagcacaagtatcaacaaccaaaaccgggtctcacgaaaatggaaacatcgcgacag-ggggctctacaataaattacaccaatattaactattatagagactcctatgctgcagctgctactcggcaggacttcacccaagatcctaataaatttactagccctgttttggatgcattaagggaagttgcacctccactgaaatccccttcagcagaagcgtgcggctacagtgatagggtggcacaacttacagttggcaactccaccatcaccacccaggaggctgctaacataattgtggggtatggtgagtggccggaatactgtcccgatgtcgatgcaactgccgttgacaaacccacgagaccagacgtgtcagttaatcgattttacaccctatcagccaaaatgtggcagaaag------------------aatcaaagggttggtattggaagttccctgatatcctcactgaaaagggagtgtttggacaaaacgcccagtttcattacttgtatagatcgggtttctgtgtccatgtccagtgcaatgctagtaagttccatcaaggcgcacttcttgttgcgctcatgcctgagcatgtggttgctggtatgggtgctggagacaaaccctcaa---cagctccgcatcccgactataaagctacgcaacccggacctgatggtgctgagctacaatacccctatgtcctagactgtggggtccccataagtcagttactaatatgcccgcatcagtggatcaacctcaggaccaacaactgtgctacaatcataatgccttatatcaacagtgtgccatacgattcggccatcaatcattgtaacttcacattgtttgtcattcccgtgagtccattgaactatgacgcaggtgccacggcagccataccaatcacagtaactgttgcgccactgtgcgcggagtttgggggattgcgccaagcagtctctcaaggtttgccagtagaaataaagcctgggtcttatcaattcctgactacagacgacgaggtatctgccccaatattgccaggattccaacccaccccagaaattcacattccaggcgaagttaggaatttgctggaattgtgtcaagttgagacgatcctagaggttaataa----------------taccactgatactcatggc------atgtctaggttattgatccctgtgtctgcacagacag------ctgctgacaagctgtgtgcatcattcagagttgatcccgggcgaagcggcccgtgggagtctacgctcctgggacagatctgtaggtactacacacaatggtctggttcactggaagtgacatttatgtttacgggctcctttatggctacaggcaagatgctcatagcctacacaccacccggtggagagcagcccaagacacgagatgtggctatgctgggcactcatgtaatttgggactttggacttcagtcctcggtcaccttagtcattccttggatcagcaattcacattatagaacagtagaaactggtggcatactcgattactactccacagggatagtgaccatctggtatcaaactaacttcgttgtacccactggggcacccaccagtgcttacatcatagcccttggagcagctcaaaagaacttcacgcttaaactgtgcagggatactgagtctatctctcagactgccatattacagggtgatccg--------attgctgacataatag---aaggggctgt--------------------------gactcagaccactaatagagcaataagtggatcgattcaacca--------gtgacggctgctaacactcagcccagttctcatcggcttgggacagggcaagtaccagctctgcaagcagcggagacaggagcaacttcaaacgctaccgatgagagcatgattgaaaccaggtgtgtggtcaacaagcatggggttatggaaacaagtgttgagcacttcttttctcgttcgggtctagcagggatcttgataattgaggactctggaacctc----tacaaaaggatatgccacttgggaaatcgatgtgatgaggtttgtacaattgagacgcaacctggaaatgtgcacatacatgcgatttgacgcagagttcacctttattactgcggaaaggaatggcaacaccagtccgatacccgtccaatacatgtatgttccacccggggctcctgtccctaccggtagggacacgtttcagtggcaaacagcaacaaacccatcagtgatttcgaagatgacagacccgccagctcaggtgtcagtaccattcatgagcccagctagcacctatcaatggttttatgatggctatcctacgtttggggagcccccagctaccaccaacctaaattacgggcaatgccccaacaataagatgggtactttctgcatccgcatggtgtcaggagtatcaacgggcaaagacgtcacagtgcgcatttttatgaagctaaagcacgtgcgtgcttgggtacctagacccattaggagtcagccctacttgttgaagaactacccaaattttgataaggc----aaatattgtagatgcttcatctaatagaactagcat---aaccac---------------------------------------cactggg------------------------------------------aaatttgggcaacagtcaggagctatatatgtgggaaattacagggtggtcaatcgccatttggccacacacaatgattggaccaatttggtgtgggaagacagctcaagagaccttttagtctcttccaccaccgcacaggggtgtgacaccattgctcggtgcagttgccaaaccggagtgtactactgcaattctaagagaaagcactacccagttagtttctcaaaacctagcctcatctttgtggaggccagcgaatattaccctgccaggtatcagtcccacctcatgcttgcggcaggtcattctgaaccaggagactgtgggggcatcctcaggtgccaacacggggtcgttgggatagtgtcaactggtggcaatggccttgtagggtttgccagtgttagagatctcctatggttagacgaggaagccatggaacagggcgtgtccgattacattaag-ggactgggcgatgccttcggcacgggcttcaccgacgccgtatccagggaagtggaagctctaaagaatcacttgattggctcagaaggcgcagtggaaaaaatcctaaagaatttggtaaagctcatctcagctctagtcatagttattaggagcgactatgatatagtcactcttaccgcaactctagccctgatcggttgtcacggaagtccatgggcatggattaagtcaaagacagcgtccatcttaggcatccccatggcgcagaaacagagtgcatcttggttgaagaagttcaatgacatggcaagcgctgcaaaaggactggagtggatctcaaataaaattagcaagtttattgattggcttaaagagaagatcatcccagccgcgagagaaaaagttgaattcctgagcaaccttaagcaattgcct-ttactggagaatcaaatttccaacttggaacaatctgccgcttcacaggaagatcttgaagccatgttcgggaatgtatcgtatctggccca---------cttctgccgcaagtttcaacctctttatgcaaccgaagcaaaaagggtttacgccctggagaaaagaatgaataattatatgcagttcaagagcaaacaccgtattgaacctgtgtgtttaattattagaggctcaccaggaacaggcaaatcacttgccacaggcattattgcaagggcaattgccgataaatatcactccagtgtgtactctctaccaccagacccagaccatttcgacgggtacaagcaacaggtagtcacagtcatggacgacttgtgtcaaaatcctgacggcaaggacatgtcattgttctgtcaaatggtgtccacggttgacttcattcctccaatggcctcactggaagagaaaggtgtgtccttcacctccaaatttgttatcgcttcaactaatgccagtaacattattgtcccgacggtctcagactccgatgcaattcgcaggaggttctttatggactgcgacattgaggtgaccgactcttacaaaacagaccttggacgcctggacgcaggcagggctgcaaaactttgttcggaaaacaacactgccaacttcaagaagtgtagtccgctggtgtgtggtaaagccatccaattaagggacaggaagtccaaggttagatacagtgttgatactgtggtgtcagaactaatcagagagtacaatagcagatctgccatagggaacaccatagaagcattatttcacgggccacccaagtttaggccaataagaatc---aatcttgaagagaagcctgctccggacgctatcagtgacttgctagctagtgttgacagcgaggaggttcgacagtactgc-agggaacaagggtggataatcccggaaacaccaactaatgtggagcgacaccttaacagagcagtattggtgatgcaatccatagccactgtagttgcggttgtgtctcttgtctatgtcatctataagctgttcgctggtttccagggcgcgtattctggagcgcccaaacaagccctcaagaagcctgtgttgagaacagctacagttcaagggcccagtttggacttcgctttgtctctcttgagacgcaatatcaggcaggcgcaaactgaccaaggacacttcactatgctcggggtgcgcgaccgccttgccatcttgccccgccactcgcaaccaggaaaggctatctgggttgagcacaagttagttaatgtgctggatgctgttgaactggtggacgagcagggcgttaacttggaacttacgctagtaaccttagacaccaacgagaagtttagagacatcaccaaatttattccagagaacatcagtggtgccagcgatgcaactttggtgattaacaccgagcacatgccatcaatgtttgtcccggtaggagatgttgtgcaatatggattcctgaacctcagtggtaagccaacccacagaaccatgatgtacaactttcccacaaaggctggacagtgcgggggcgtggtcacgtcagttggcaagatcattggtattcacattggaggtaatggacggcaaggtttctgtgctggtctgaagaggagctactttgctagtgagcagggtgagatccagtgggtgaaacccaacaaagagactggtagattgaacatcaatggaccaacacgcaccaagttggaacctagtgtgttccacgatgtgttcgagggtaataaagaaccagcagttttgactaacaaagatcctagactggaagttgactttgagcaagctctattctccaaatacgtgggcaatgttctccatgagcctgatgaatatgtgcagcaagctgctctccactatgcaaaccagcttaaacaactggatataaataccaacaagatgagcatggaagaggcgtgttatggtacagagaacttggaagctattgaccttcatactagtgccgggtacccttacagcgctttgggcataaaaaagagggacatcctggaccctgccactagagatgtatcaaagatgaagttttacatggacaagtacggtttggacctaccctactccacctacgtgaaagatgagctcaggtctctagacaaaatcaagaaagggaaatcccgcctgatagaagctagtagtctgaatgactcagtgtacctcagaatgacttttggccatctttatgaagtgtttcacgccaacccagggactgtgacagggtcagcagtcggatgcaacccggacgtgttttggagcaaactcccaatcttgctgcctggttcgttatttgcttttgactactcaggatatgatgctagccttagtcctgtctggtttagagctttggagatggtcttgcgggacattggctattcggaagaggcagtatcactcatagaagggataaaccatacacaccatgtgtatcggaacaagacatactgtgtcctcggtgggatgccatcagggtgctcaggcacttccatcttcaattcaatgatcaacaacattataatcaggactctcttgatcaaaactttcaaagggatagacttggatgagttaaatatggtggcttatggagatgatgtactagccagctacccctttcccattgactgtctagaactagccaagactggtaaagagtacggactaaccatgacacctgcagacaaatcaccttgtttcaacgaagtgacgtgggagaacgccacctttttaaagagggggttcttgccagaccaccagttcccattcttgattcaccctacaatgcccatgaaagaaatccacgaatctatacggtggaccaaggacgcgcgcaacactcaagatcatgtgcgctctctgtgcttattggcttggcacaacggtaaggatgaatatgaaaattttgtgagtacaattagatcagttccagttggaaaagcattggcaattccaaattttgagaatttgaggaggaattggctcgaattgtttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gcgggggtaaatttgt-ta-taacc-a-g-agtagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>HQ728261.1_Human_coxsackievirus_A5_strain_CVA5/SD/CHN/09_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactctggtactgcggtacctttgtgcgcct-g-ttttatc-----tccccagac---ccccgc------aacg-tcacattagaagatagacaat-ac---------------gaccaa-tagtcagtggggcaacccagcctcactttgg-tcaagtacctctg-tttccccgggcttagtaccaataggctgc-ttgcgcggctgaaggggaacgcgcccgttatccggctaactacttcgagaaacc-tagtaccaccatggaagttgccgagtgtttcgctcagca--caa-cccca---gtgtagatcaggtcgatgagtcaccgta-caccccacgggcgaccgtgacggtggctgcgttggcggcctgcccat--------ggtgcac-accatgggacgctctaatacagacatggtgcg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgtggagcatgcgctctcaaccca-gagag-tagcgtgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatattggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccgg--tgtgcaatagagctattgta-----tattct----tttgtt-ggctttgtgccat-----tagatta--------------tactgcaattgct-actttaagatacatcttgtttctgaacacagcaaaa-------tgggagcgcaggtgtcaacaaccaaaaccgggtctcatgaaaatggaaacatcgcgacag-ggggctctacaataaattacaccaacattaactattatagagactcctatgctgcagctgctactcggcaggacttcacccaagaccctaataaatttactagccctgttttggatgcattaagggaagttgcacctccactgaaatccccttcagcagaagcgtgcggttacagcgatagggtggcacaacttacagttggcaactccaccatcaccacccaggaggctgccaacataattgtgggatatggtgagtggccggaatactgtcccgatgtcgatgcaactgccgttgacaaacccacgagaccagacgtgtcagtcaatcgattctacaccctatcagccaaaatgtggcaaaaag------------------aatcaaagggttggtattggaagttccctgatatcctcactgaaaagggagtgtttggacaaaatgcccagtttcattacttgtatagatcgggtttctgtgtccatgtccagtgcaatgctagcaagttccatcaaggtgcactccttgttgcgctcatgcctgagcatgtggttgctggtatgggtgctggagataaaccctcaa---cagctccgcatcccgactataaagccacgcaacccggacctgatggtgctgagctacaatacccctatgtcctagactgtggggtccccataagtcagttattaatatgcccgcatcagtggattaacctcaggaccaacaactgtgctacaatcataatgccttatatcaacagcgtgccatacgattcggccatcaaccattgtaacttcacattgtttgtcattcccgtgagtccattgaactatgacgcaggtgccacggcagccataccaatcacagtaactgtcgcgccactgtgcgcggagttcgggggattgcgtcaagcagtctctcaaggtttgccagtagaaataaagcctgggtcttatcaattcctgactacagacgacgaggtctctgccccaatattgccaggatttcaacctaccccagaaattcacattccaggcgaagttaggaatttgctggaattgtgccaagttgagacaatcctagaggttaacaa----------------tactactgatactcatggc------atgtctaggttactgatccctgtgtctgcacaaacag------ctgctgacaaactgtgtgcatcattcagagttgatcccgggcgaagcggtccgtgggagtctacgctcctgggtcagatctgtaggtactacacacaatggtctggctcactggaagtgacatttatgtttacgggctcctttatggctacaggcaagatgctcatagcctacacaccacccggtggagaacagcccaagacacgtgatgtggccatgctgggcacccatgtaatttgggactttggactccagtcctcggtcaccttagtcatcccttggatcagcaattcacattatagaacagtggagactggtggcatactcgattactactccacagggatagtgaccatctggtatcaaactaatttcgttgtacccaccggggcacccaccagtgcttacatcatagcccttggagcagctcaaaagaatttcacgctaaaattgtgcagggatactgagtctatctctcagactgccatattacagggtgatccg--------attgctgacataatag---aaggggcagt--------------------------gactcagaccactaatagagcaataagtggatcgattcaacca--------gtgacagctgctaacactcagcccagttctcatcggcttgggacagggcaggtaccagctctgcaagcggcggagacaggagcaacttcaaacgccaccgatgagagcatgattgaaaccaggtgtgtggtcaacaggcatggggttatggaaacaagtgttgagcacttcttttctcgttcgggtctagcaggaatcttgataattgaggactctggaacctc----tacaaaagggtatgctacttgggaaatcgatgtgatgggatttgtccaattgagacgcaagctggaaatgttcacatatatgcgatttgacgcagagttcacctttattactgcggaaaggaacggtaacaccagtccgatacccgtccagtacatgtatgttccacccggggctcctgtccccaccggtagggacacgtttcagtggcaaacagcaacaaacccatcagtgatttcgaagatgacagacccgccagctcaggtgtcagtaccatttatgagcccagctagcacctatcaatggttttatgatggttatcctacattcggggagcccccagccaccaccaatctaaattacgggcagtgccccaacaataaaatgggtaccttctgcattcgcatggtgtcgggagtatcaacgggcaaagacgtcacagtgcgcatttttatgaagctgaagcacgtgcgcgcttgggtacctagacccatcaggagtcagccctacttgttgaagaactacccaaattttgataaggc----aaatattgtagatgcttcatctaatagaactagcat---aaccac---------------------------------------cactggg------------------------------------------aaatttgggcaacagtcaggagccatatatgtgggaaattacagagtggtcaatcgccacttggccacacacaatgattggaccaatttggtgtgggaagacagttcaagagaccttctagtctcttccaccaccgcacaggggtgcgacaccatcgctcggtgcaattgccaaaccggagtgtactactgcaattctaagagaaagcactacccagttagtttctcaaaacccagtctcatcttcgtggaggccagcgagtattatcctgccaggtatcaatcccacctcatgcttgcagcaggtcattctgaaccaggagactgtgggggcattctcaggtgccaacacggagttgttgggatagtatcaactggtggcaatggcctagtagggtttgccagtgttagagatctcctatggttagatgaggaagccatggaacagggcgtgtccgattacattaag-gggctaggcgatgccttcggcacgggcttcaccgacgccgtatccagagaagtggaagctctaaagaatcacttgattggctcagaaggcgcagtggaaaaaatcctaaagaatttggtaaagctcatctcagctctagtcatagttattaggagcgactatgatatggtcactcttaccgcaacccttgccctgatcggatgccacggaagtccatgggcatggattaagtcaaagacagcgtccatcttaggcatccccatggcgcagaaacagagcgcatcttggttaaagaagttcaatgacatggcaaacgctgcaaaaggactggagtggatctccaataaaatcagcaagtttattgattggcttaaagagaagatcatcccagccgcgaaagaaaaagttgaattcctgagcaaccttaagcaattgcct-ttactggagaatcaaatttccaacttggaacaatctgccgcttcacaggaagatcttgaagccatgttcgggaatgtgtcgtatctggccca---------cttctgccgtaagtttcaacctctttatgcaaccgaagcaaaaagggtttatgccctggagaaaagaatgaataattatatgcagttcaagagcaaacaccgtattgaacctgtgtgtttaattattagaggctcaccaggaacgggcaagtcacttgccacaggcattattgcaagggcaattgccgataaataccactccagtgtgtactctctaccaccggacccagaccatttcgacgggtacaagcaacaggtagtcacagttatggacgacttgtgtcaaaatcctgacggtaaggatatgtcattgttttgtcaaatggtgtccacggttgatttcattcctccaatggcctcactggaagagaaaggtgtgtccttcacctccaaatttgttatcgcttcaaccaatgccagtaacattattgtcccgacggtctcagactccgatgcaattcgcaggagattctttatggactgcgacattgaggtgaccgactcttacaaaacagaccttggacgcctggacgcaggcagggctgcaaaactttgttcagaaaacaacactgccaacttcaagaggtgtagtccgctggtgtgcggcaaagccatccaattaagggacaggaagtccaaggttagatacagtgttgacactgtggtgtcagaactaatcagagagtacaacagcaggtctgccatagggaacaccatagaagcactatttcaggggccacccaagtttaggccaataagaatc---agtcttgaagagaagcctgctccggatgctatcagtgacttgctagctagtgttgacagcgaggaggttcgacagtactgc-agggaacaagggtggataattccggaaacaccaactaatgtggagcgacaccttaacagagcagtgttggtgatgcaatccatagctactgtagttgcggttgtgtctcttgtctatgtcatctataagctgttcgctggtttccagggcgcgtattctggagcgcccaaacaagccctcaagaagcctgtattgagaacagctacagtccaagggcccagtttagacttcgctttgtctctcttgagacgcaatatcaggcaggtgcaaactgaccaaggacacttcactatgctcggggtgcgtgaccgccttgccatcttgccccgccattcgcaaccaggaaaggccatctgggttgagcacaagctagttaatgtgctggatgctgttgaactggtggacgagcagggcgttaacttggaacttacgctagtaaccttagacaccaacgagaagtttagagatgtcaccaaatttattccagagaacatcagtggtgccagtgatgcaactttggtgatcaacaccgagcacatgccgtcaatgtttgtcccggtgggagatgttgtgcagtatggattcctaaacctcagtggtaagccaacccacagaaccatgatgtacaattttcccacaaaggctggacagtgcgggggcgtggtcacgtcagttggcaagatcattggtattcacattggaggcaatggacggcaaggtttctgtgctggtctgaagaggagctactttgctagtgagcaaggtgagatccagtgggtgaaacccaacaaggagactggtagattgaacatcaatggaccaacacgcactaagttggaacctagtgtgttccatgatgtgttcgagggtaataaagaaccagcagttttgacaaataaagatcctagactggaagttgactttgagcaagctctattttccaaatacgtgggcaatgttctccatgagcctgatgagtatgtgcagcaagctgctctccactatgcaaaccagctcaaacaactggatataaataccaacaaaatgagtatggaagaggcgtgttacggcacagagaacttggaagccattgaccttcatactagtgccgggtacccttacagtgctttgggtataaaaaagagagacatcctggaccctaccactagagatgtatcaaagatgaagttttacatggacaagtacggtttggacctaccctactccacctacgtgaaagatgaactcaggtctctagacaaaatcaagaaagggaaatcccgcctgatagaagctagtagtctgaatgactcagtgtacctcagaatgacttttggccatctttatgaagtgtttcacgccaacccagggactgtgacagggtcagcagtcgggtgcaacccggacgtgttttggagcaaactcccaatcttgttacctggttcgttatttgcttttgactactcaggatatgatgctagccttagtcctgtctggtttagagctctggagatggtcttgcgggacattggctattcggaggaggcagtatcactcatagaagggataaaccatacacaccatgtgtatcggaacaagacatactgtgtcctcggtgggatgccatcagggtgctcaggcacttccatcttcaattcaatgatcaacaacattataatcaggactctcttgatcaaaactttcaaagggatagatttggatgagttaaatatggtggcttatggagatgatgtgctagccagctacccctttcccattgactgtctagaactagctaagactggtaaagagtatggactgaccatgacacctgcagacaagtcaccttgtttcaacgaagtgacgtgggagaacgccacctttttaaagagggggttcttgccagaccatcagttcccattcttgattcaccccacaatgcccatgaaagaaatctacgaatctatacggtggaccaaggacgcgcgcaacactcaagatcatgtgcgctctctgtgcttattggcttggcacaatggtaaggacgagtatgaaaattttgtgagcacaattagatcagttccagttggaaaagcattggcaattccaaatttcgagaatctgaggaggaattggctcgaattgtttt--aa-atttacagttt-------------------------gtaa---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-agtagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY421763.1_Human_coxsackievirus_A5_strain_Swartz_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgccagcactctggtatcgcggtacctttgtgcgcct-g-ttttatg-----accc--------ctcccc------aacc-gaaacttagaagttacacata-cc---------------gatcaa-tagtgggcatagcacgccagctgtgtcttga-tcaagcacttctg-tttccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaagcgttcgttatccggctaactacttcgagaaacc-tagtaacaccatgaaagttgcggagtgtttcgctcagca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgcg-ttccccacgggcgaccgtggcggtggctgcgctggcggcctgcctat--------gggatga-cccataggacgcttcaacacagacatggtgtg-aagagtctattgagctagttagtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgtgccctcaagcca-gaggg-tggcgtgtcgtaacgggcaactctgcagcggaaccgactactttgggagtccgtgtttcc--tttt---attcttacactggctgcttatggtgacaattgag-------agattgttaccatatagctattggattggccatccgg--tgagcaacagagcgattgta-----tactct----tttgtg-ggttttgtgccat-----taaatct--------------tactgtgattacc-acactgaaactcatcttgcagtttaatacagcaaaa-------tgggagcacaagtgtctactacgaggacagggtcacatgagaatggcaacatagcgacag-gaggttccacgataaattacactaacatcaattattatagggactcttatgcagcagctgctactcggcaagacttcacgcaagatcctagcaagttcgccagtcctgttttggatgcgcttaaggaagtagcacccccactaaaatccccttcagcggaagcatgtggatacagcgatagggtggcacagctcactgtcggtaactccaccataacgacacaagaggctgctaacatcattgtagggtacggtgaatggccagagtattgccccgatgtcgacgcaaccgctgtcgataaaccaacgagacctgacgtgtcagtcaaccgattttacaccctgtcggccaagatgtggcagaaag------------------agtcaaaggggtggtattggaagtttccagacattcttactgaaaagggagtctttggacaaaatgcccaattccattacctgtatagatcagggttttgtatccatgttcagtgcaatgctagtaagttccatcaaggcgcgcttttagtcgcactaatgccagagcatgtggttgccggtatgggtgctggggataagccctcca---cagccccacaccctgactacaagtcgactcaacctggacccgatggggctgagctccaatttccatatgtgttggactgtggtgttccggtgagtcaacttctaatctgcccgcatcagtggatcaacctgaggactaacaactgtgccacgattattatgccttacatcaacagtgtgccctacgactctgccattaaccattgtaatttcacattgtttgtcatccccataagcccactaaactatgatgcgggtgccacagcagccataccaattacagtgacagttgcaccgttgtgtgcagaatttggaggcttgcgtcaagcagtttcccagggtttaccagtggagataaaacctgggtcttaccaattcctgactactgatgatgaagtttctgccccgatcctgccagggtttcaacctactcccgaaattcacatcccaggagaagtacgaaacctattggagctgtgccaagttgagacgattttggaagtcaataa----------------tactactgacactcacggt------atgtctaggatgcttatacctgtgtctgcacagacag------ctgcagataagttatgtgcgtctttcagagttgatccaggtaggaacggcccgtgggagtccacgaccctgggtcaaatctgcaggtattatacacaatggtcaggctccttggaagtgacatttatgtttacaggatcatttatggctacaggcaagatgcttatagcttacacaccacctggtggcgaacagcccaagacgcgtgatgtggccatgttaggtactcatgtgatttgggattttgggcttcaatcttcagttactttagttatcccatggatcagtaactcacactataggacagtggagactggtggcatactcgactactattctacagggatagtaaccatttggtaccaaactaattttgtggtgcctaccggagcgcccaccagtgcttatattatagctcttggagcagcccaaaagaacttcacgctcaagttgtgcagagacactgagtccatctctcaaaccgctatactgcagggagaccca--------attgcagatataatag---aaggagcagt--------------------------agctcaaactaccaccagagcactaagtggaccaattcagcca--------gtgacagcggccaacacctctcccagttcacatcggcttggtacggggcaagtgccagctttgcaagcagcagaaacgggagccacctcgaatgcgaccgacgagagtttgattgaaaccaggtgtgtggtcaacagacatggagtcatggaaactagcattgaacacttcttttcacgctcaggcttggcaggaattttgataattgaggactccggtacttc----cacgaaaggctacgccacttgggaaatcgatgttatgggatttgtccagctgaggcgtaaactagagatgttcacatacatgcgatttgatgcagagttcacctttatcacagcagaaaggaatggcaacaccagcccaatacccatccagtacatgtatgtcccacccggagccccagtccctactggtagggagacattccaatggcaaacagcgaccaatccatccgtgatctcaaagatgactgatccaccagcccaggtgtctgtaccatttatgagcccagccagtacttatcaatggttctacgatggctaccccacgttcggagaagttccagtgactacgaacttgaactatggacagtgcccaaacaacaaaatgggcactttctgcatccgcatggtctcaggtgtatctacaggcaaggacgtcactgtgcgcattttcatgaagttgaagcatgtgcgcgcctgggtgccaaggcccatcaggagccagccttacttgttaaagaattatcccaactttgacaagtc----aaatattgtagacgcatcatcgaacaggaccaatat---aaccac---------------------------------------cactgga------------------------------------------agatttgggcagcagtcgggagctatatacgtgggcaactatagggtggtaaacaggcacctcgccactcataacgattgggcaaatttggtgtgggaagacagttccagggacctcttggtctcttcaaccactgctcaaggatgtgacaccattgctcggtgcagctgtcaaactggagtgtattattgcaactctcgcaggaaacactacccagttagtttctccaaacccagcctgatttttgtggaagccagcgaatattaccctgcccggtatcaatctcatctcatgcttgccgaaggacactcagaacccggagattgtgggggcatccttagatgccagcacggagtggtagggatagtctccacaggcggaaatggacttgtagggtttgctgacgtgagagatcttttgtggctggatgaagaggctatggaacaaggggtgtctgattacatcaag-gggcttggtgatgcgttcgggacaggcttcactgatgcagtttccagagagattgaggccctcaagaaccatctcatagggtctgaaggggcagttgagaagatcctcaagaacctcattaaactgatctctgcactggtaattgtgatcaggagtgattatgatatggtcaccctcacagcaactttggccctaatcggatgccatggcagtccctgggcctggatcaaggctaagacagcttctattctaggcatccccattgctcaaaaacagagtgcatcatggctaaaaaaattcaatgatatggccaacgccgccaagggactggaatggatatctaataaaatcagtaaatttattgattggctcaaggataagatcataccagcagctaaggagaaggtggaatttctgaataacttgaagcagctgcca-ttactagagaatcagatctcaaacctggagcaatctgctgcttcacaggaggacctcgaggcaatgtttggcaatgtgtcgtatctcgcaca---------tttctgccgcaagttccaaccgttgtacgccactgaagccaaaagggtctacgccctggaaaagaggatgaacaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtcttattattaggggctccccaggcactgggaaatccttggcaactggtatcattgcccgggcaatagccgacaaataccactccagtgtgtactcacttccaccagacccggatcactttgatggatataagcagcaagtggttacggtcatggatgatttgtgtcaaaatccagatggtaaggacatgtctttattttgccaaatggtctccactgtggatttcatcccaccaatggcttctcttgaggaaaagggtgtctcttttacatctaagttcgtcatcgcatcaactaatgccagtaatattatagtaccaacggtgtctgattccgacgctatccggcgcagattctttatggattgtgacatcgaagtgacggactcatacaaaacagatctgggcagactagacgctggacgggctgccaggttatgttccgagaataacacagcgaattttaaacgctgtagtccgctggtgtgcgggaaagccattcagcttagggataggaaatccaaggtcaggtacagtgtggacactgtggtttctgaactcatcagggagtacaacaacagatcagcaattggtaatacaattgaagccctgtttcaaggcccacccaaatttagaccaataaggatt---agtcttgaggagaaaccagctccagatgccattagcgacctacttgctagtgttgacagtgaagaagttcgccagtattgc-agggaccagggatggatcatcccagaaacacccacaaatgttgagcgccatcttaacagggcggtactggtcatgcaatctatcactactgtagtggcggtagtttcactggtgtatgtcatttacaagttgtttgctggatttcaaggtgcgtattctggcgcacccagacaggtactcaagaagcccattctccgtacggcaacagtccagggcccgagccttgactttgctctctcgttattgaggaggaatattaggcaagttcagacagatcagggacacttcaccatgctcggcgtcagagatcgcctggctgttcttccacgtcactcacatcccggtaagacaatctgggtggaacacaaattagtgaatgttctagatgctgtggaattagtggatgagcagggagtaaacctggagcttgtccttataactcttgacatcaatgagaagtttagagacattacaaaattcattccagaaagtatcagtgctgctactgacgccaccctagtgatcaacacagagcacatgccatccatgttcgtgccagtaggtgatgtagtgcagtatggcttcctaaaccttagtggtaagcctacccatcgcaccatgatgtacaattttcccaccaaggctgggcagtgtggtggtgtagtgacatctgttggaaagatcattggcattcacattggtggtaatggacgccaaggattctgtgctggtttgaagagaagctacttcgcaagtgaacagggcgagatccagtgggtgaagccaaacaaggagactgggagactgaacatcaatggcccgacacgtaccaaactggaaccaagtgtgttccatgatgtgttcgagggcaacaaagaaccagcagtcctgacaagcaaagacccaaggctggaggttgattttgagcaagcgctgttctccaaatatgtgggcaatgtcttacacgagcctgacgagtatgtgactcaggctgcccttcattatgcaaatcaactcaagcaactggacataaacaccaccaaaatgagcatggaggaagcatgttacggcactgagaacttggaggccatagatctccatactagtgcaggatatccatacagtgctttggggattaagaagagagatatcctcgatccaacaaccagggatacctccagaatgaaattttacatggacaagtacgggctggacttaccctattccacctatgtgaaggatgaactcagatctctggataaggttaagaagggaaagtcacgcttgatagaggccagtagcttgaatgattctgtttaccttagaatgacttttggtcacctttatgaggcgtttcatgccaaccccggtactgtaactggttcagcggtgggctgcaacccagatatattttggagcaaattaccaattttgttgcctggctcactcttcgcctttgattactcaggatatgacgctagcctcagcccagtgtggttcagagccttggaggtagtgctgcgggagatcggttattcagaagaggctgtgtcactaattgaggggataaatcacactcatcatgtgtaccggaacaagacatattgtgtccttggcgggatgccctcaggatgctctggtacttccatcttcaactcaatgatcaataacatcattattaggactctcctaattaaaacttttaaaggaatagatttggatgagttgaacatggtggcttatggagatgatgtgctggctagttaccccttcccaattgactgcctggagttggcaagaacgggtaaggagtatgggttgaccatgacaccagctgacaagtcaccctgctttaatgaagtcacttgggaaaatgctacttttctgaagagagggttcctgcctgaccatcagttccctttcctcatccaccctacgatgcctatgaaagagattcatgagtctattcgctggacaaaggacgctcgtaatactcaagaccacgtgcgttctctctgcctgttggcgtggcacaacgggaaggatgaatatgaaaagtttgtgagtacaattagatcagttccaattggaaaggcattagcgataccaaattatgagaatttgaggaggaattggctcgaattatttt--aa-atttacagttt-------------------------aaaa---------------ctgaaccc-caccagaa----gtctggt------c-g-----tgctaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JQ041367.1_Human_coxsackievirus_A7_strain_LEV8_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-ccccacccaca-gggcccac-t-gggcgttagcactctggtattacggtacctttgtgcgcct-g-ttttata-----acccc---t---cccc--------aact-gtaaattagaagc------------aacacacgtc----gatcaa-tagtaggcgtgacgcaccagtcacgtcttga-tcaaggacttctg-ttgccccggaccgagtatcaatagactgc-tcacgcggttgaaggagaaaacgttcgttacccgaccaactacttcgaaaaacc-tagtagcaccatgaaggttgcggagtgtttcgctcggca--ctt-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgctggcggcctgcctat--------ggggtaa-cccataggacgctctaatacggacatggtgcg-aagagtctattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcgcgcgcccccattcca-ggagg-tagcgcgtcgtaacgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---atctttattctggctgcttatggtgacaattgac-------agattgttaccatatagctattggattggccatccga--tcacaagcagagcgattatc-----taccaa----tttatt-ggatttatcccac-----tgcacactcgt----------gaatataac-----acattactgctgatactgagtttggacaaagcaaaa-------tgggcgctcaaatatcaacacaaaaatctggctcccatgagacgggtaacatcgctactg-agggatccaccataaactttactaatatcaattactacaaagactcctacgctgcctcagctagcaagcaagactttactcaagatccggggaaattcaccagcccggtcctagatgttttatcagagatggcagcaccactgcaatcaccgacagcagaagcatgtggatacagtgatagggtcgcgcagctcacagtaggtaactcgacaattacaacgcaagaagcggctaatgtgattgttgcttatggggagtggccacaatattgtcctgacactgacgctacagcggtggacaagcccactcgtcctgacgtctcagtcaatagattttatacactagacaccaaagattggtcatcta------------------gttcaaaggggtggtattggaaattcccagatattctagcggaaactggagtcttcggtcaaaatgcacagttccactttttgtataggtcagggttttgcattcacgttcaatgcaatgccagcaagtttcatcagggagcactattggttgcagtcttaccagaatatgttactggtactgtgtctggcaacactggacttg------agaatactcacccaccatacgctgctactcagcctggtgctacagggtttgagttgaccaacccgtacattctagacgctgggatcccgttgagccagttgttagtgtgccctcaccagtggattaaccttcgaactaacaactgtgccactatagtggtaccatacattaacagcgtcccttttgattcggccttaaaccattgcaatttcggtttagtagtgattccagtctcaccccttgggttcctgcaaggggccacaccaacaattcccataaccatcacagtggcccctatgaactccgagttctctggattgagacaagctgttactcaaggtttgcccatggagttaaaacccggcaccaaccaatttctcaccaccgatgatggtgtatcagcccctatactgcctgggttccacccaacaccagtaatacatattcctggggaagttagaaacctcttagagctgtgtcaaattgacacaataatggaagttaacaa----------tcttaccacgaatgaagccactccc------atggagcgcttgcgcatacccgtacaagtccaaacac------agtcgggtgaattgtgcgcagcattcaaagctgatcctgggcttgatggcccatggcaatccactatggttgggcagctttgtagatattacacccaatggtcagggtctttaaaaataactttcatgttcaccgggtcatttatggccactgggaaaatgctgatagcctacactcctcctggtggctctctgcccgccaacagaatgcaggcaatgctgggcacccacgtcatctgggattttggtttgcaatcatctgtcacactagttgtaccatggattagcaacactcattatcgctcgcaggccactggcagcttctttgattactatgccactggcatagtatctctatggtaccagacaaaattcgtcgtccctataggtgcgccaactactgcttatatagtggttctgggtagcgcccaaaagaatttcaccatgcggctatgcagggacactagtgaactgacacaagccgcagagtatcagggagacgaa--------atagtcgacctaatcg---agagtgctgt--------------------acag---------aataccactaaagccattacc--agctcaatcgaca------ccaaaactggtgctaacactcaagctagccaacatcgtataggcttgggggaggttcccgctcttcaagctgctgagacaggatcgtcttcgctcgtttcggacaagaacatgatagaaacaagatgtgtcgtaaacaaacacagcacagaggaaaccagcattacaaacttctactccagggcgggcctagtgggggttgtgaacatgccagtacaaggaaccag-caacacaaagggtttcgcaaagtgggggatagatataatgggctttgtgcagatgaggcgcaaacttgagctcatgacatacatgagattctccgccgagtttacgttcgtagccagcactcctgggggagagactactaaccttatactgcaatacatgtatgcacctcccggagctccgctgccaaccaggcgggattcatacgaatggcaaacatccactaacccctctattatcagcaagatggcggacccacccgctcaggtatcggttccattcctttctcctgcatcagcatatcagtggttctatgatggctaccccacatttgggaaacacccaatagatcaggacttccaatatggcatgtgcccaaacaacatgatgggcacattctgtgtgcgcatgatcggtgggggcaaaccgacccaatcagttaccatacgtatatacatgagattaaagcatatccgtgcatgggtgccccggccactgaggagtcagaattacactatgaggaattacccgaactacaacggggg----cgcaataaaatgtacatcaaaaagcagagctaccat---aacaac---------------------------------------cttagga------------------------------------------aaatttggccaacaatccggagcaatttatgtggggagctacagagtggtaaacaggcatttggcaacccacaatgactggaaaaacctggtgtgggaggacagttccagagatttgttagtctcatccactactgcccaaggctgtgatgccatcgcccggtgtgactgtcaaacgggggtgtattattgcaattcccgtagaaaacattatccagtcagtttctctaagcccagtttcgttttcgtggaagctagtgagtactacccggcaaggtaccaatctcacctcatgttagctcaagggcactcagaacccggtgactgtgggggcatcctcagatgccagcacggcgtggttggtatagtctccacgggcgggaatggtctagtgggttttgctgatgtgagagaccttttgtggctagatgaggaagccatggagcaaggggtgtctgattacatcaag-ggacttggtgatgcctttggcacaggatttactgacgcggtttccagagaagttgaggccttgaagaaccacttaatcgggtctgagggtgctgtggagaagatcctcaaaaacctggtgaagcttatttccgcacttgtcatcgtcattaggagtgattatgatatggtcacattgacagcaacactcgccctgattggatgtcgcggaagcccgtgggcctggattaaatcaaaaacagcatccatcctgggcattccaatggcccagaagcagggtgctacttggttgaagaagttcaacgacatggtaaatgctgcaaaagggctcgagtggatctctaacaaaatcagcaagttcatcgattggctcaaggaaaagataatcccagccgcaaaagaaaaggttgagtttttgaacaatttgaagcaacttccc-ttactggaaaaccaaatctccaacctggaacaatcagctgcctcgcaagaagaccttgaggcaatgtttggtaatgtgtcgtatcttgccca---------tttctgccgcaaatttcaaccattatatgcgacagaagctaaaagggtatatgctttaraaaagaggatgaacaactacatgcagttcaagagcaaacaccgtattgaacctgtatgtttaatcatcagaggctccccaggcacgggtaagtcacttgccacaggcatcattgctagggccattgctgataaataccactctagtgtttactcacttccgccagatccagatcactttgacgggtacaaacagcaagttgtcactgtcatggatgatctctgccaaaatccagatgggaaagacatgtctctgttctgtcaaatggtttccactgtagacttcattccgcccatggcctccttggaagagaaaggagtgtcattcacctccaagttcgttatagcatcaactaatgccagcaacatcatagttccaacagtgtcagactccgacgccatccgtaggcgattctttatggactgtgacatcgaagtgactgattcttataagacagacttgggcaggcttgatgctggaagggctgccaaattgtgctcagaaaacaacaccgctaactttaaaagatgtagtccactagtatgtgggaaagctatccaattgagagataggaaatccaaagttcggtatagtctggacacagtaatttcagagcttattagagaatacaataatagatcagctattgggaacaccatagaagcactatttcagggacccccaagatttagacctattagaatt---agcctcgaggaaaagcccgcacctgatgccattagtgacttacttgctagtgttgatagtgaggaagttcggcaatattgc-agggaccaggggtggataatacctgaaacccctacaaatgtggagcgccatctaaatagggctgttcttgtaatgcagtcaattgctacggttgtggcagtagtgtctcttgtctatgttatctacaagctctttgcaggcttccagggtgcttattctggcgcacccaagcaggtgttgaagagaccggtactgaggaccgcaactgtgcaagggccgagtcttgactttgctctttcccttctgcgtaggaacatcaaacaagctcagactgatcaaggtcatttcactatgttgggtattcgcgatcgactggccatcttgccgcgtcatgcacaaccaggaaagaccatttgggttgaacacaaactggtcaatgtcttagatgcggtcgagttggttgawgaacaaggagttaatctagaactcaccttagtcaccttggataccaatgagaaatttagagatatcactaagttcatcccagaggtaataagcggagctagtgatgcaaccttagtgatcaatactgagcacatgccatctatgttcgtacctgtgggtgacgtggtgcaatacgggttcctaaatcttagtggtaaacctacccacagaaccatgatgtacaacttccccacaaaagcgggccagtgtggtggtgtggttacctcagtagggaaaattattggaatccacattggtgggaatggacgccaggggttctgtgcaggtctgaaaagaggctattttgtaagtgagcaaggggaaattcagtggatgaagcccaataaggagactggcaggttgaacatcaatgggcccacccgcacaaaacttgaacccagtgtgttctatgatgtatttgagggtaacaaggagccagctgtccttactagtaaagatcccagactagaggtagactttgaacaagccttgttttctaaatacgtgggaaatgtactgcacgaacctgatgagtacgtgacccaggcagcactacattatgctaatcaattgaagcagctggacatcaataccaacaagatgagcatggaggaagcgtgctatggcactgaaaatttagaagctattgacctccacactagtgctggttacccatacagtacgctgggtatcaagaagagggacatccttgatccaactactagagatgtttctaaaatgaagctttacctggacaaatatggcctagatctaccttactccacttatgtgaaagatgagcttagatcactagacaaaatcaagaaagggaagtcccgcctgattgaagccagtagtctaaatgattctgtttaccttagaatgacttttggccatctgtatgaggtgtttcatgccaacccagggacggtaaccggttcagcagtaggttgtaatccagacgtgttttggagtaaactcccgattttgcttccagggtcgctctttgcatttgactattcaggatatgacgctagtcttagtcctgtgtggtttagagctttagaaatagtcctgcgggaggtcggttactcagaggaagcagtgtctcttatagagggaatcaaccacacccaccacgtgtaccgcaacaagacctattgtgttcttggtgggatgccctcaggctgttcaggcacctctatcttcaattcaatgatcaataatataattattagaaccctcttgatcaagacgtttaaggggatagaccttgatgagttgaatatggtggcatacggagatgatgtattagctagctacccttttcccattgattgctcagaattagcaaaaacaggtaaagagtatgggttaactatgacaccagctgataaatcaccctgtttcaatgaagttacctgggaaaatgccaccttcctgaagagggggttccttcctgatcatcagttccctttcctcatccaccccacaatgcctatgagagaaatccatgagtccatacgttggacaaaggatgcacgcaacacccaagaccatgtacgctctctttgtctgttggcatggcataatgggaaggacgagtacaaaagatttgtaagcacaattagatcagtcccaattggaaaagcgttagctataccaaattttgagaatttgagaagaaattggcttgaattatttt--aa-acctacagctt-------------------------tgag---------------ctgaaccc-caccagaa----atctggt------c-g-----tgttaat-g-actg--------gtggaggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>GU942820.1_Human_coxsackievirus_A7_isolate_275/58_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcctac-t-gggcgccagcactctggtactatggtacctttgtgcgcct-g-ttttata-----ttcct---c---cccc-------aaatt-gcaacttagaaga------------catgcactcc----gatcaa-tagcaggcgtggcgcaccagctgcgtcttga-tcaagcatttctg-tttccccggactgagtatcaatagactgc-tcacgcggttgagggagaaaacgtccgttacccggccaactacttcgagaagcc-tagtaacactatgaaagttgcggggcgtttcgctcagca--ctc-cccca---gtgtagatcaggtcgatgagtcaccgca-ttccccacgggcgaccgtggcggtggctgcgttggcggcctgcctat--------ggggcaa-cccatgggacgctctaatatggacatggtgtg-aagagcttattgagctagttggtagtcctccggcccctgaatgcggctaatcctaactgcggagcacgtgcctccaaacca-gaagg-tggcgtgtcgtaatgggcaactctgcagcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttactctggctgcttatggtgacaattgac-------agattgttaccatatagctattggattggccatccgg--tgacgaacagagcgattgtg-----taccag----tttatt-ggtttcgtccact-----tgaatacacgt----------gaattcaat-----accttgctgttggtattgaatttcaatacaacaaaa-------tgggcgctcaagtatcaacgcaaaaatctggctcccatgaaacgggcaatatcgcgacag-aggggtccaccataaatttcactaacattaactactataaggattcctatgctgcgtcggccagcaggcaagacttcacacaagacccgaagaagtttaccagtccggtgctggacgtcctgtcagagatgtctgcaccattgcagtcaccgacggcggaggcgtgtggttacagtgatagggttgcacaactcacagtgggtaactcgacaataactacacaagaagcagccaatgtaatcgtggcatatggagagtggccacagtattgtcctgacactgacgccacagctgtggataaacccactcgtcctgatgtctcggttaacaggttttacacactagacaccaaagactggtcctcca------------------gctcaaaagggtggtattggaaattccctgacattcttgcagagacaggtgtctttggtcaaaatgcacaatttcacttcttgtataggtcagggttctgcattcatgtccagtgcaatgccagtaaattccatccaggggcactattagttgcgatcctgccggagtatgtcactggtactgtgtccggcaaccctgggctcg------aggacacccacccaccatacgccgctacccagcctggtgctgcagggtttgagttaaccaatccatacattttggatgcagggatcccgctaagtcaactgttagtatgccctcaccaatggatcaaccttcgcacgaacaattgtgctactatcgtggtcccatacattaacagtgtccctttcgattcggccctcaaccattgcaattttggcttggtagttgttccagtctcacccctcgggttcttgcagggggccacacccacgatccctataaccatcacagtggctcccatgaattcagagttttctgggttgaggcaagctgtcacacaaggattgcccatggaactgaagcctggtaccaaccaatttctcacgaccgacgatggtgtatcagcccctatattgcccgggtttcacccaacaccagtgatacacatccctggggaggtgaaaaacctcttggagttgtgtcagattgacacaataatggaagtcaacaa----------cctcactaccaatgaggcaacacct------atggaacgcctacgcataccagtgcaagttcagacac------agtcaggtgaactgtgcgcagcattcaaagctgatcccggccttgatggtccgtggcagtccaccatggtcgggcagctttgtagatactacactcagtggtcaggttctttaaaaataacttttatgttcactggatcatttatggctacagggaaaatgctgatagcctataccccccccggaggctccctacctgctaatagaatgcaggcaatgcttggtactcacgtcatatgggactttggtcttcaatcatctgtcacactagttgtcccgtggatcagtaacacccactaccgatctcaggccactggcaatttctttgactattatgccactggtatagtgtccctgtggtaccagaccaacttcgttgttcccatcggtgctcctaccactgcttatatagtggttctgggtagtgctcagaaaaattttaccatgcgactgtgcagggataccagtgagttgtcacagtctgcggagtatcaaggagatgag--------attgtcgatctcattg---agagtgctgc--------------------acag---------aataccactaaagctattact--agctcaattgaca------ccaagactggcgccaacactcaagctagtcagcaccgtataggcttaggggaagtccccgcccttcaggctgctgaaacagggtcatcctcacttgtctcagacaagaacatgattgagacgagatgtgtcgtgaataaacacagtacagaggagaccagtatcacaaatttctattctagagcaggcttggtggggtttgtgaatatgccggttcaggggactag-caacacagaaggttttgcgaaatgggaaatcgatataatgggctttgtgcagatgaggcgcaagctagaactcatgacatacatgaggttttccgctgaatttacgtttgtagcgagcactcctggggggaagactaccaacctcatattacaatatatgtatgcacctcccggggcgccactgccatctaaacgggattcatacgaatggcaaacatccactaacccatcaataattagcaagatgacagatccccctgcccaagtgtcggtcccattcctttcccctgcatcagcttaccagtggttttatgatggttaccctacatttggaaagcacccaatagaccaggacttccagtacggtatgtggccgaacaacatgatgggtacgttttgcgtacggatgattggtgaaggcaatccaacacaatctgtcaccatacgcgtgtacatgagattgaagcacatccgcgcatggataccccggccactgaggagccaaaactacaccatgaagaactacccaaactataatggggg----cgctataaaatgtacatcaaagagtagggctacaat---aacaac---------------------------------------attggga------------------------------------------aagtttgggcagcaatctggagcaatatatgtgggcaactacagggtagtaaatagacacctagccacccacaatgactgggcgaacttggtgtgggaagatagttccagagacttgttggtatcatccactactgcccagggatgtgatatcatcgcccggtgcaactgccagactgggatatactactgtaattcccgcaggaaacactacgcagttagcttttctaaacccagtttaatttttgtggaagctagtgaatactacccagctagataccaatcccatcttatgttagctgcaggtcactcagaacctggtgattgtggaggcatcctcaggtgtcagcatggtgtcgtgggaatagtttccactggagggaacggccttgtaggattcgctgatgtgcgagatctgctttggctagatgaagaagctatggaacagggtgtttctgattacatcaaa-ggccttggcgatgccttcggcacaggtttcactgatgcagtgtctagggaagtggaggccttaaagagtcatcttattggatcggagggcgcagtggagaaaatcctgaagaacctagtaaaactcatttcagccctggtcatagtcatcaggagcgattacgacatggtcactctaactgcaactctcgccctgataggatgtcacgggagcccgtgggcgtggattaaatcaaagacagcttccattttgggtattcccatagcacagaaacagagtgcatcatggctgaagaaatttaacgacatggcaaatgctgcaaaggggttagaatggatctctaacaagatcagtaagtttattgattggctaaaagagaagatcatcccggctgccaaggagaaagttgagttcttaaacaacctcaaacagttaccc-ttgttggaaaaccaaatttccaacttagagcaatctgccgcttcacaagaagaccttgaggccatgtttgggaacgtgtcatatttagccca---------cttctgccgcaagttccaaccgctttacgcaactgaagcaaaaagggtgtatgccctggagaagagaatgaacaactacatgcagttcaagagcaaacaccgtattgagcctgtgtgtctgatcattagaggatccccaggtactggcaaatcacttgccacaggcatcattgctagagctattgctgacaaatatcactctagtgtatactctcttccaccggacccagatcatttcgacggatacaagcaacaagtggtcacggtcatggatgacctatgtcagaaccctgatggtaaagacatgtccctgttttgccaaatggtgtcaactgttgatttcatccccccaatggcatcactggaggaaaaaggagtgtctttcacttccaagtttgtcatcgcatccaccaatgccagcaatatcatcgtccctactgtttcagactccgatgcaattcgcaggagatttttcatggactgtgacatagaggtgactgactcctacaaaacggatctcggccgattggacgcgggcagagccgccaaattgtgttcagaaaacaacactgccaattttaaaagatgcagcccgttagtatgtggtaaagctatccaactacgggataggaagtctaaggttagatacagcgtcgatactgtagtgtcagaattgatcagagagtacaacaatagatttgccattggcaataccattgaagcactcttccagggacctccaaaatttagaccaattaggata---agccttgaggaaaaacccgcccctgacgctattagcgacttgttggctagtgtggacagtgaggaggtgcgacagtattgc-agagaccaagggtggataatacctgaaacaccgaccaatgttgagcgtcatctcaacagggccgtccttattatgcaatctatagcaacagtggtagcggtggtctcattagtttatgtcatctacaaattgtttgctggattccaaggggcgtactctggagctccaaagcaggtgctaaagaaaccagttctgaggacagccaccgtacagggccctagtctggatttcgccctgtctcttttgcggcgcaacattaggcaagtgcagacagatcagggccacttcaccatgttgggcgttcgtgaccggctggccatattaccacgccacgcccaaccaggaaagaccatatggattgagcataaactggtggacatcctggatgccgtggagctggttgacgagcaaggagtgaacttggaactaaccttagtaactttagatgccaatgagaaatttagggacatcaccaaattcatcccagaaacgatcaccggcgctagtgacgctaccctagtgatcaatacagagcacatgccatctatgttcgttccagtaggcgatgttgtacagtacgggttcttaaaccttagtggcaagcctacccacaggactatgatgtacaactttcccacgaaagcgggacaatgtgggggtgttgtcacttcagtgggcaagatcatcgggatccacattggtgggaatggtcgtcaaggcttctgtgctggtttgaagaggagttattttgccagtgaacagggagagattcaatggatgaagcccaacaaagaaactgggaggttgaacatcaacggtccaacccggactaaactggagcccagtgtgttccatgatgtgttcgagggcaacaaggagccggcggtcctaactagcaaagatccaaggttagaggttgactttgagcaggccctattctctaagtatgttggtaacacactacatgaacctgatgagtatgtaacccaagccgcccttcattacgcaaaccagttgaagcagctggacattaacactagcaagatgagtatggaggaagcatgttatggaactgtgaatctagaagccattgacttacacactagtgctgggtacccctacagtgctttaggcattaagaagagggacatccttgatccggttaccagagatactaccaagatgaagttctacatggacaaatatggattggatttaccttactccacctatgtgaaggatgagctcagatccttagacaaaatcaagaaaggaaagtctcgcttaattgaggccagcagtctaaatgattctgtttacctcaggatgacctttggacacctttatgaagtgttccacgccaacccaggaactataactgggtcagctgtggggtgcaaccctgatgtgttctggagtaaattgccaatcctgctaccgggtgcgctcttcgcatttgattattcagggtacgatgcaagtctcagtcctgtgtggtttagagccttggaagtggttttacgagagattggttacccagaggaagctgtgtcccttatagaaggaatcaaccacacccatcacgtgtaccgaaataggacatattgcgttcttggtgggatgccttcaggttgctctggcacctctatttttaactccatgatcaataacataataatcaggaccctcttgattaagactttcaaaggaatagatctggatgaactaaacatggtggcgtatggagacgatgtgctggccagttacccatttcctattgactgtttggagctggcaagaaccggtaaggagtacggactaacgatgacacctgccgacaaatcaccctgttttaatgaagtcacctgggagaatgctactttcttgaagagaggctttttaccagatcatcaattcccattcttgattcatcccataatgcccatgagggaaatccatgagtccattcggtggaccaaggatgcacgtaacacccaagaccacgtgcgttccttgtgcctgctggcgtggcataatgggaaggaagagtatgagaaatttgtgagcacaatcagatcagtcccagttggaaaggtattggcaattccaaattacgagaatttgagaagaaattggctcgaattatttt--aa-atttgcagttt-------------------------aaag---------------ctggaccc-caccagaa----atctggt------c-g-----tgtaaat-g-actg--------gtgggggtaaatttgt-ta-taacc-a-g-aatagc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>KT277550.1_Enterovirus_A89_strain_KSYPH-TRMH22F/XJ/CHN/2011_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacactggtatcacggtacctttgtgcgcct-g-ttttatg-----caccc---t---tttt-cc-------ct-gtaactcagaagaaacaaacaaac---------------gatcaa-tagtgggcttagcgctccagctaagtcttga-tcaagcacttctg-ttaccccggaccgagtatcaataggctgt-acccacggctgaaagagaaaacgttcgttatccggctatctacttcgggaaacc-tagtaccatcatgaagattgcaaagcgtttcgctcagca--caa-cccc---agtgtagatcaggtcgatgagtcactgca-ttccccacaggtgactgtggcagtggctgcgttggcggcctgcctat--------ggggaaa-cccataggacgctttaatattgacatggtgcg-aagagtctactgagctaggtagtagtcctccggcccctgaatgcggctaatcccaaccacggagcaggcgctcacactcca-gtgag-tagcttgtcgtaacgcgaaagtctgtggcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttatcatggctgcttatggtgacaatc-ta-------agattgttatcatatagctattggattggccatccgg--tgaattctagagacattatt-----tacttg----tttgtt-ggttttaccacac-----tgaacat--------------taccaatcacaga-actctcctttacatcttgttgttaaacaatagaaaga-gaaaatgggagctcaagtgtccactcaaaagaccgggtcacatgagaatcagaacgttgctgcca-atggttctacaataaattataccactatcaattactacaaagagtcatatgcagcttcggccactaagcaggacttttcacaagacccatctaaatttacacaaccagtggtagatgcattgaaagagactgcacctcctctgaaatccccctcagctgaagcgtgcgggtacagcgacagagtggcacagctcacagttgggaactccaccattaccacacaagaggctgccaacatcacttgtgcttatggggaatggccagactactgccctgacactgaggcgactgcagttgacaagccgaccaagcctgatgtgtcagtaaacagattttacacattgtcagctaaattatgg---------acaaaga---------actcttctggttggtattggaaattccctgacgtattgactgaaattggtgtttttggtcaaaatgctcaattccattatctatataggtcaggcttttgcattcatgtccaatgtaatgccagcaagtttcatcaaggtgcactcttggtagtggcaattccagagtatgtacagggcaggtctagtaactcaaccactcctgctt---cagcccctcacccaacataccaagcggtgcagccagggaaaaatggaaaagagctagccttcccatatgtcttggatgctggtatcccacttagtgaagcactaatctttcctcatcagtggataaacttgagaactaacaactgtgccactatagttatgccctacatcaatgctgtgccatatgactcagcgttgaaccattgcaatttcggattgtgtgtgatccctatagtccctcttgactacaatgaaggtgccacctcagcaatacccataacggttactattgcaccgctgaactccgaattcggtggtctgagacaagctgtgcaacaaggacttcctgccgaactcaaaccaggtaccaaccaattcctcactacagatgatggtatttctgctccaatcttaccaggcttccaccccactcctgagatacacataccaggtgaagtgacaaatttactagagatatgtcaagtagagtctattattgaagtgaacaa----------tttgagtaccctagaaacctcatcaactgccatgcagagactctcatttgaggtctcagtgcaaagtg------cagtagaccagttgtgtgctgcattcagggtagacccaggtagagatggaccatggcaatcaaccttagttggccagatttgtaaatactacacccagtggtcaggttcactggaggtcacattcatgttcactggttccttcatggccacgggtaaaatgctcatagcatacacccctccagggggccccaaaccagctaatcgtgagacagccatgctaggtacgcatgtcatctgggattttggcctacagtcctccgttacactagtgattccatggattagtaatacacacttcagaacacaagccacaggtggttactttgattactacacagctggaattgtaacaatttggtaccagacaaattttgttgtcccagatggggcgccaacccaagcccgtatcatagcacttggtgctgctcaaaagaacttcactctaaggctgtgcaaggacactgcagagataactcaaacagccattctacagggtgaccct--------atggaagacatggtca---acaatgctgt--------------------------ctccaatgccctgtccaatgccttttcacgtcccagcacccag--------tccacagctgagaataccagacccagctctcacactattggcactggtgaagttcccgcattgcaagctgccgaaactggagccacctccaacactagtgatgagaatatgattgaaactagagcagttgtcaataaacacagtgttgctgagaccagtgtggaacatttcttttccagagccgctctagtgggtatggtagaattgcttacttctgacaccac----cacaattggttacacaaattgggatattgatgtgatgggatatgttcaaatcagacgcaaactggagatgttcacttacatgagatttaatgctgaatttacttttgtcaccaccaatgccaaaggggaagccccgaacactatgttacagtatatgtatattcctccaggagcacccaaaccaactgctagagattcattccagtggcaaacgtccacaaatccatcaatatttgtgaaaatgtcagacccaccggcccaagtttcagtgcctttcatgtcaccagccagtgcttaccagtggttttacgatgggtatcccacttttggctcacacccagtagcacaagatgtgcaatatggaattgccccgaacaacttgatggggacatttgcagttagggttgtgggttcagagcagataacagataagatcactgtgagaatcttcatgagactcaaacacgttaaagcatgggtgccacgcccgctccgctcacaaaaataccttttgaagaactacccaaactttgacggcgc----gaatctcactatgtctagcgccagtcgagctgacat---caaaaa---------------------------------------tcttggt------------------------------------------aaatttggacaacaatcaggagcggtttatgtgggaaactacagaatagttaacagacacttagccatacctcaagattggacaaatctagtgtgggaagatgtaaatagggacctactaatctcaagcaccacagcgcacggttgcgacaccatcgctagatgccagtgcacaaccggcgtttacttctgtaaatccagatcaaaacactacccagtcagtttttctaaaccaggccttgtctttgtaaatgagagcatgtattaccctgctagataccaatcacacgtgctcctggcaccaggacacgctgaaccaggcgattgtggtggaatactccgttgccaacatggggtggtggggatagtttccacaggaggagatggcttagtgggttttgcagacttgcgggacattctgtggcttgatgatgaggtcatggagcagggtgtcactgattacatcaag-ggtttaggtgatgcctttggcacaggattcacagactcaatctcccgagaaattaaccagcttaagaattatctattaggctcagagaatctggtagaaaagatattgaaagctttaatcaaagttgtatcagcattggtgattgtggttagaagtgattatgacctagtgacgttgactgccactctggcgcttatcgggtgtcatggaagcccgtggagatggctcaagcacaaagtgtcaacactcttggacatccctatggcagagaagcaaagcgattcttggctcaaaaagttcactgaattcgccaatgctgctagaggcttagaatggatctcaaacaaaattagcaaattcattgattggatcaaagacaagataatcccggctgctaaggaaaaagtagaatttctaaataatctgaaacaactcaca-ctcctcgagaatcagatttccaatattgagcaatctgctgccagtcaaggtgacttggaacaactctttgggaacgtctcatatctagccca---------ttactgtaggaaatttcaaccactgtatgctgccgaggcgaagagggtctttgcattggaaaagcgcatctctaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaattgtcagaggtgctcccgggactgggaaatcattagcaactggcatcatttcccgagccattgctgaaaaataccactccagtgtgtactctctgccaccagatcccgaccattttgatggttacaaacaacaggtagttacagtcatggatgacttgtgtcaaaacccagatggtaaagacatggccctattttgtcaaatggtttctacagttgactttatccccccaatggcatcattagaagaaaagggtgtctccttcacctctaaatttgtgattgcttccacgaacatgagcaacatcatagtccccacagtgtcggatgctgacgctattagaaggagattttacatggattgtgacatagaagtcactgactcatacaaattggaatctggaaggcttgatgcaggtagggctgcaaaattgtgctcagagaataatactgccaactttaagaaatgcagtcctttagtctgcgggaaagcaatccaactcagggatagaaagacaaaggttagatatagcctagattcagtagtctccgagctcataagggagtacaacaatagatcagcaattggtaacaccattgaagctttgtttcaagggcccccagtctttaaaccagttaggatc---tccttagaagaaaagccagcaccagatgccattagtgatcttttgaagagtgtggatagtgaagaggtgagacaatactgc-agggatcagggatggatagtgcctgttcaaccaactaatgtggagaagcatcttgggagagctgtgctaataatgcaatccattgctacagttgttgcagttgtgagtctagtgtatgtcatctataagctatttgctggattccaaggtgcttactctggcatgccaaagcagaatgttaagaaaccaatcctcaggacagcaacagtgcagggaccgagtctagactttgccctttccctacttaggaggaacattagacaagtgcagacagatcagggccatttcaccatgctaggcatcagagaccagatcgcagtgctaccgcgacacgctcttcctggcaagcaaatttggattgaacataaattagttaatgttttagatgcggtggagttagtggatgaacaacaggttaatttggaactcaccttagtgactttggataccaatgagaaattcagagacattactaaatttataccagaacaaattgagggttctcccgatgctgtcttagtgataaacactgagaccatgccatcaatgtttgtccctgttggggacgttaccgaatatggctttctcaatcttagtggtagaccaacccaccgaaccatgatgtacaatttcccaactagagcaggacagtgtggaggagtcgtcacttcagtgggcaaggtagtggggattcacattggaggaaatggtagacagggattctgtgcagctttaaagcgaggctactttacaactgagcaaggtgagatccagtggatgaagcccaacaaagagacaggcaatttcaacatcaacggtccaaccaagactaagcttgaacccagtgttttccatgatgtgtttgagggagtcaaagagccagcagtcctccactccaaggacaagagacttgaagttgattttgaaaccgccctcttctccaaatacatagggaataagatccatgaaccagatgaatacatgattcaagctgcaaaccattatgcagatcagctcaaacaactagatattgatacatcaaaaatgagcatggaggatgcttgctatggaacagaattcctagaaggaattgatctggcaacaagtgcaggatacccctataatgcactaggaattaaaaagaaggacatcttgaacccccaaactagggatgtaaccaaaatgaaaatgtacttggataaatatggcattgacctcccctactccacttatgtcaaggatgagcttagagctaaagacaaaatcaagaaaggaaaatctaggcttattgaagccagtagtattaatgattcagtttaccttagaatgtgttttggccacctgtatgagaaattccatgcaaacccagggacaataactgggtcagcagtcggttgtaacccagacactttctggagtaaagttcctataatgctccctggttctctttttgcttttgattatactgggtatgatgctagtctttctcctgcttggtttagggctctagaaattgtccttaaaagattaggttatgatcaagatgctatttccttaattgagggaatcaatcactcccatcacatttacagaaatcaaacatactgtgtaatgggtgggatgccatctggatgctctggcaccagcatctttaattccatgattaataatataataatcagaactctcttaattaagaccttcaagggaattgacctagatgaattaaatatgattgcatacggggatgatgtccttgctagctaccccttccctatcgactgtgctgagctcgcaaaaacaggattggaatatggcttagttatgacaccagctgataaatctgcttgttttaacgaagtgaactgggagaacgcaacatttctcaagaggggatttaaaccagatgaacaatatccattcctcatccacccaatcatgccaatgaaagagatacacgagtccattcgctggactaaggacccacgtaatacgcaagatcacgtgcggtcactgtgtctcttggcgtggcacaatggtagggaaacttatgaggaatttgttgataaaattagaactgtaccaattggcaaggttttagctcttccaaattacgataacttgagaagaaattggcttgaactgtttt---a-aatgataatttg--------------------------aa---------------ttaatgtt-aattggcaaaacctttggtgcaccct-g-ggcttgataaa---gtca--------ccaaaggt-taattac-cc-taaccca-g-tagggt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY697459.1_Human_enterovirus_89_polyprotein_gene_complete_cds
------------------ttaaaa--cag-cct-ctgggttg-c-acccacccaca-gggcccac-t-gggcgctagcacactggtatcacggtacctttgtgcgcct-g-ttttata-----caccc---t---cccc-cc-------tt-gtaacttagaagaaacaaacaaac---------------gatcaa-tagtaggcttagcactccagctaagtctcga-tcaagcacttctg-ttaccccggaccgagtatcaataggctgt-acccacggctgaaagagaaaacgttcgttacccggctatctacttcgggaaacc-cagtaccatcatgaagattgcaaagcgtttcgctcagca--caa-cccc---agtgtagatcaggtcgatgagtcactgca-ttccccacaggcgactgtggcagtggctgcgttggcggcctgcctat--------ggggaaa-cccataggacgctttaatattgacatggtgcg-aagagtctactgagctaggtagtagtcctccggcccctgaatgcggctaatcccaaccacggagcaggcgctcacactcca-gtgag-tagcttgtcgtaatgcgaaagtctgtggcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttatcatggctgcttatggtgacaatc-ta-------agattgttatcatatagctattggattggccatccgg--tgaattctagagatattatt-----tacttg----tttgtt-ggttttaccacat-----taaacat--------------taccaattacaga-actctcctctacatcctgttattgaataatagaaaga-gaaaatgggagctcaagtgtccactcaaaagaccggatcgcatgagaatcagaatgttgctgcca-atggctctacaataaattacaccactattaattactacaaagaatcatacgcagcttcggccactaagcaggacttttcacaagatccatctaaattcacacaaccagtggtagatgcactgaaagaaactgcacctcctttgaaatctccctcagctgaagcgtgcggctacagtgacagagtggcgcaactcacagttgggaactccactattaccacacaagaggctgccaatatcgcttgtgcctacggggaatggccagactactgtcccgacactgaggcaactgcagttgacaagccaaccaagcctgatgtgtcagtaaatagattttacacattatcagccaaattatgg---------acaaaga---------actctcctggttggtattggaaattccctgatgtactgactgagattggtgtctttggtcaaaatgctcaattccactatctatataggtcaggtttttgtattcacgtccagtgtaatgccagcaagtttcatcaaggcgcactcttagtagtggcaattccagaatatgtgcagggtaggtctagtaactcaaccactcctgctt---cagcccctcacccaacataccaagcggtgcagccagggaaaaatggaaaggaattagccttcccgtatgtcttggatgctggtatcccacttagtgaagcactaatcttccctcaccagtggataaatttgagaactaacaactgtgccactatagttatgccctacatcaatgctgtgccatatgactcagcgttgaaccattgcaatttcgggttgtgtgtgatccctatagtcccccttgactacaatgaaggtgccacctcagcaatacctataacagttactattgcaccgctgaactccgagttcggtggtctgagacaagctgtacaacagggactccctgccgaactcaagccaggcaccaatcaattcctcactacagacgatggtgtttctgctccaatcttaccaggcttccaccctacccctgaaatacacataccaggtgaagtaacaaatttgctagagatatgccaagtagagtctattattgaagtgaacaa----------cttgagtaccctagaaacctcatcaaccgccatgcagagactctcatttgaggtctcagtgcagagtg------cagtagatcagttgtgtgctgcattcagagtggacccaggtagagatggaccatggcaatcaactctagttggccagatttgtaaatactatacccagtggtcaggttcattggaggttacattcatgttcactggctctttcatggccacaggtaaaatgctcatagcatacacccctccaggggggcccaaaccagctaaccgtgagacagccatgctaggcacgcacgtcatctgggattttggcctacagtcctccgttacactagtgattccatggattagcaacacacacttcagaacacaagctacaggtggttactttgattactacacagctggaattgtaacaatttggtaccagacaaattttgttgtcccagacggggcgccaacccaagcccgcattatagcacttggtgctgcccaaaagaacttcactctaaggttgtgtaaagatactgcagagataactcaaacagctatcttacaaggtgacccc--------atggaagacatggtca---acaatgctgt--------------------------ctctaatgctctgtccaatgccttttcacgtcccagtacacaa--------tccacagctgagaacactaggcccagctctcacaccattggcactggtgaagtccctgcattacaagctgccgaaactggagccacttccaacactagtgatgagaatatgattgagactagagcagttgtcaataagcacagtgttgctgagaccagtgtggaacacttcttttccagagccgctctggtgggcatggtagaattgctcacttctgacactac----cacaataggttacacaaattgggatattgatgtgatgggatatgtccaaatcagacgcaaattggagatgttcacttacatgagatttgatgctgaattcacttttgtcaccaccaatgccaaaggggaagccccgaataccatgttacagtatatgtacattcctccgggagcacccaaaccaaccgctagggactcatttcagtggcaaacatccacaaatccatcaatatttgtgaaaatgtcagacccaccagcccaagtttcggtgccctttatgtcaccagccagtgcttatcagtggttttatgatgggtatcccacttttggttcacacccagtagcacaagatgtgcaatatggaattgccccaaacaacttgatgggaacgtttgcagtcagggtcgtgggttcagaacagataacagataaaattactgtgagaatcttcatgagactcaagcatgttaaaacctgggtgccacgcccgctccgctcacaaaagtaccttttgaagaactacccaaattttgatggcgc----aaacctcactatgtctagcgccagccgagctgacat---caaaaa---------------------------------------tcttggt------------------------------------------aaatttggacaacaatcaggagcagtttatgtgggaaattacagaatagttaacagacacttagctatacctcaggattggacaaatctagtgtgggaagatgcaaatagggatcttctaatttcaagtaccacagcacatggctgcgacaccatcgctagatgtcagtgcacaaccggtgtttacttctgtaaatccaaatcaaaacactacccagtcagtttttctaaaccaggccttgtttttgtgaatgagagtatgtattaccctgccagataccaatcacacgtgctcctagcaccgggacacgctgaaccaggtgattgcggtggaatactccgttgccaacatggagtggtagggatagtttccacaggaggggatggtttagtgggctttgcggacttgcgggacattctgtggcttgacgatgaggtcatggagcagggtgtcactgattacatcaag-ggtctaggggatgcctttggcacaggattcacagactcaatttcccgagaaattaatcagctcaagaattatttattaggttcagagaatgtagtagagaaaattttgaaggccttaatcaaagttgtttcagcattagtgattgtggttaggagtgactatgatcttgtgacattgactgctaccttggcacttatagggtgtcatgggagtccatggaggtggctcaaacataaggtgtcaacacttctagacatacctatggcagagaagcaaagtgactcctggcttaagaaattcactgaattcgccaatgctgccaggggtttagaatggatctccaacaagatcagcaagttcattgactggattaaagataagatcgttccagccgccaaggaaaaagtggaatttctaaataaccttaagcaacttaca-ctccttgagaaccagatttccaacattgagcaatctgctgctagccagagtgacctagaacaactctttggaaacgtttcatatctggccca---------ttattgcagaaaatttcaaccactgtatgctgctgaagcaaagagggtctttgcactagaaaaacgcatctctaattacatgcagttcaagagcaaacaccgtattgaacctgtatgtttgattgttagaggtgctcctggaactgggaagtcgttggcaactggtatcatttctcgagctattgctgaaaaataccattccagtgtgtactccttaccaccagaccctgatcactttgatggttacaagcaacaagtagttacagttatggatgacttgtgtcaaaatccagatggtaaagatatggccctattttgtcaaatggtttctacagttgattttattcctccaatggcatcattagaagaaaagggtgtctccttcacctctaagtttgtaattgcttccacgaacatgagcaacatcatagtccctacagtgtcagatgctgatgctatcagaaggagattttacatggattgtgacatagaggtcactgactcatacaaactggagtctggaagattggatgcgggcagagccgcaaaactgtgctcagaaaacaacactgctaacttcaagaagtgtagcccgttagtctgtgggaaagcaattcagctcagggatagaaagacaaaagtcagatacagcctagattcggtggtctctgagctcataagggagtacaacaatagatcagcaattggtaacaccattgaagccttgttccaaggtcccccagtcttcaaaccagtcaggatc---tccttagaggagaaaccagcaccagatgctattagtgaccttttgaaaagtgtggatagtgaggaagtgagacagtattgc-agagatcagggatggatagtgcctgtccaaccaactaatgtggaaaaacaccttggaagagctgtgctaataatgcaatctattgctacagttgttgcagttgtgagtctagtgtatgtcatctacaagttgttcgctggattccaaggtgcttactctggtatgcccaagcaaaatgttaagaaaccagttctcaggacagcaacggtgcagggaccgagtctagactttgccctttccctactcaggagaaacatcaggcgagtgcagacagaccaaggccatttcactatgttaggcatcagagaccaaattgcagtgctgccacgacatgcccttcctggcaaacaaatttggattgaacataaattagtcaatattttagatgcagtagagttagtggatgaacaacaggttaatttagaactcaccttagtgactttggacaccaacgagaaattcagagacattactaaattcataccagagcaaattgagggttctcctgatgctgtcctagtgattaacactgaaaccatgccatcgatgttcgtccccgtcggggatgttactgaatatggtttccttaatctcagtggtagaccaacccaccggaccatgatgtacaatttcccaaccagggcaggacagtgtggaggagttgtcacctctgtgggcaaggttgtagggattcacattggagggaatggcaggcaaggattctgtgctgccttgaagcgaggctactttacaactgagcaaggtgagatccagtggatgagacctaataaggagacaggcaactttaacatcaatggcccaaccaagactaaacttgaacccagtgtttttcatgatgtatttgaaggagtcaaagaaccagcagtccttcattccaaggacaaaagacttgaggtcgactttgaaactgcccttttctctaaatatatagggaacaaaatccatgaaccagatgagtacatgattcaggctgcaaaccattatgcggaccagctcagacaattggatattgacacatcaaaaatgagcatggaggatgcttgttatggaacagaattcctagaaggaattgatttggcaacaagtgcagggtatccctacaatgcattgggcatcaagaagagagacatcctgaacccccaaaccagagatgtaaccaaaatgaaaatgtacttggacaagtatggtattgacctcccctactctacttacataaaggatgagcttagagctaaggataaaatcaagaaaggaaaatctaggttgattgaagctagtagcattaatgattcagtttaccttagaatgtgctttggccatttgtatgagaaattccatgcaaatccagggacgatcactggttcagcagttggttgtaacccagacactttctggagtaagatccctataatgctccctggttccctctttgcttttgattatactgggtatgatgctagtctttctcctgcttggtttagagctttagaaattgttctcaaaagattaggttatgatcaagatgctatctcattgattgaggggatcaaccactcccatcacatttacagaaatcaaacgtactgtgtaatgggcggaatgccatctgggtgctctggtactagtattttcaattccatgatcaacaatatcataatcaggactcttctgatcaggacatttaaagggattgatttggatgagttaaatatgattgcatatggagatgatgttcttgctagttaccccttccctattgactgtgctgaacttgcaaaaacaggattagaatatggtttagtcatgacaccagctgataaatctacctgctttaacgaagtgaattgggaaaatgcaacattccttaagagaggattcaaaccagatgagcaatatccattcctcatccacccaactatgccaatgaaggaaatacatgagtccattcgttggactaaggacccacgtaacacacaagatcacgtgcggtcgctgtgcctcctagcatggcataatggcagggaaacctatgaggagtttgttgataaaatcagaactgtgccaattggcaaagtcttagctcttccaaattatgataacttgagaagaaattggcttgaactatttt---g-aatgataatttg--------------------------ag---------------ataatgtt-aattggctatatctttggtgcaccct-g-ggcttgacaaa---gtca--------ccaaagat-caattac-cc-taaccca-g-tagggt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JF905564.1_Human_enterovirus_76_strain_04360/SD/CHN/2004/EV76_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggctcac-t-gggcgctagcacactggtatcacggtacccttgtgcgcct-g-ttttata-----caccc---t---cccc-cc----ttttt-gtaacttagaagaaacaaacacac---------------gatcaa-tagcaggcttagcgcaccagctaagtcttga-tcaagcacttctg-ttaccccggactgagtatcaataagctgt-gcccacggctgaaagagaaaacgttcgttacccggctgtctacttcgggaaacc-tagtaccatcatgaagactgcaaagcgtttcgctcagca--caa-cccc---agtgtagatcaggtcgatgagtcactgca-ttcctcacaggcgactgtggcagtggctgcgttggcggcctgcctat--------ggggaaa-cccataggacgctttaatgttgacatggtgcg-aagagtctactgagctaggtagtagtcctccggcccctgaatgcggctaatcccaaccacggagcaggcgctcacactcca-gtgag-tagcctgtcgtaatgcgcaagtctgtggcggaaccgactactttgggtgtccgtgtttcc--tttt---attcttatcatggctgcttatggtgacaatc-ta-------agattgttatcatatagctattggattggccatccgg--tgaactctagagatattatc-----tatttg----tttgtt-ggttttaccaagt-----taaacat--------------caccagctacacc-actcttctttatatcatattattgaacagtaaaaaga-gaaaatgggagctcaagtgtctactcaaaagaccgggtctcacgagaatcagaatgttgctgcta-atggttccaccataaattataccactattaattattacaaagaatcttacgcagcatctgccaccaaacaggatttttctcaggatccatcaaagtttacacagccagtagtggatgcattgaaggaaaccgcaccacccttgaaatccccgtctgctgaagcatgtggttatagtgatagggtagcacaattgactgtaggaaattccacaatcacaacacaggaggcggcaaacatcactgtaggttatggagaatggccagagtactgtcctgacactgatgctactgcagtagataaacccactcgccctgatgtatctgttaacaggttctataccttaccagccaaattatgg---------accaaagaaggaacaggctctaagggatggtactggaaattccccgatgtgcttacagaaaagggagtattcggacagaatgcacagtttcatttcttgtacaggtcaggattctgcattcatgtgcagtgcaatgctagtaagtttcaccaaggtacactattagttgcttgcctcccagagtatgttaatgctcgtgcaagtactaatgataccaatgcaa---ctgcacctcacccaccatatgccgtaactcaaccaggccccaacggtaaggaattgactttcccatatgtgttggatgcaggaatacccattaatcagctgttaatcgcaccacaccaatggattaatttgcgcacaaataattgtgccactatagttatgccatatattaatgcagtgccctatgactccgccctcaaccattgcaattttggtttgtttgtgattccagtagcacccctcaattattctgacggtgcgacaacagccatacccatcacagttactattgcccctctttgctcagagtttggaggccttagacaggctattacacaaggtctcccagcggaactcaagccaggtaccaaccaattcttgactactgataacggagtttcagcaccaatactgcctggtttccaccctactccagcaattcacatccctggcgaggtacataacctgttagagattgcacaagttgaaagcatacttgaggttaataa----------cctgacctcattggaaacacccagtacactaatgcaaagattgct------gatcccagtagaggccaaatcatcaccagatactttatgtgccagctttaaagttgatcctggcagggatggaccatggcaatctacattagtcgggcaaatttgcaaatattacacacaatggtctggatcactagaagttacgttcatgttcactggatcttttatggccactgggaaaatgttaattgcttacacgccaccaggaggtgcacaacccactacaagagaccttgcaatgttgggcacacacgttatctgggactttggtttacaatcatcaatcaccctagtgataccttggattagtaacagccacttcagaacacaggcaacaggtggattctttgattactatgcatcaggtgttgtcactatttggtaccaaacaaattttgtggtgccatctggagcccctaccagtgcatacatcattgcactaggtgcagcacagaaaaatttcactctcagattgtgcaaagacactgaagccatctcacaaactgcaatattacagggtgaccca--------gtggaggacatgatta---acactgctgt--------------------------taacaacacactgtcacaatctatagggagacctcaaactcaa--------ataactgctgagaacaccagacccagcacacaccaaatcggtactggagaagtccctgcacttcaagcagctgaaactggggccacctctaataccacagatgaaaacatgattgaaaccagggcagttattaacaagcatagcactgaggagacttgcatcgaacacttcttctccagagcaggccttgtgagcatgatctcccttctagtgtctgagaaaac----aacccaagcctatgccaactgggaaattgatacaatgggctttgtccagatgaggagaaaacttgaaatgtttacatacatgagatttaatgctgaattcacctttgtcgctacaggactcaatggcacagctcctcaaacaatgttacagtatatgtatgtcccgcctggtgcaccagtaccgacagacagggattcattccaatggcagactgctactaacccttctgtgtttgttaaaatgtcagatcccccggcccaagtgtctgtcccattcatgtcaccagcaagtgcttaccagtggttttatgacgggtatcccacatttggctcacaccctgtatcagaagatctcaggtatggtattagccctaacaacaaaatgggtaccttctcaatcagagtggttggatccggacagcttacagaagctgttgtgatcaggatcttcatgcgcattaagcacgtgcgcgcctgggtcccgagacccatccgttcccagaaatatatagtgaagaattaccctaactttgacccagctgttaaaccacac-------agtaccagcagggctagtataaccactaa---------------------------------------cacaggg------------------------------------------gcatttggacaacaatcaggagcaatctatgttggaaattacagaattgtcaacaggcacctggcaacaaagaaagattgggagaacttggtatgggaatcatatgaaagagatttacttgtctccactatcaccgctcatggttgtgataagatcgccagatgcaagtgcagagctggagtgtacttttgcaaatcaatgaacagacactatcctgtcacttttggtgaaccagccttcttccatgtagatgctaatgagtactacccagaaagataccaatcacatgtgatctcatcagccggcatcgccttaccaggtgattgtggaggcattctcaggtgtgaacacggagtcatcgggatcgtctcaattggcggtcctaacttagttggcttcgcagatgttagagatttactgtggttagatgatgaggttatggaacaaggagttacagactatataaaa-ggattaggtgatgcttttggaactggtttcactgattcaatctctagggaaatcaatcagctcaaaaattacctattaggctcagaaaatgtggtggagaagattttgaaagctctaatcaaagttgtatcagcactggtgattgtggttagaagtgactatgacctagtgacgttgactgccactctggcgcttattgggtgccatggaagcccgtggaaatggctcaagcacaaagtgtcaacactcctagacatccctatggcagagaagcaaagtgattcttggcttaaaaagttcactgaattcgccaacgctgctagaggtttagaatggatctcaaacaaaattagtaaattcattgattggattaaagacaaaatcatcccggccgccaaggaaaaagtggaatttctaaataatctaaagcaactcaca-ctccttgagaatcagatttccaacattgagcaatctgccgccagtcagggtgacttagaacaactctttgggaacgtttcatatctagccca---------ttactgcagaaaatttcaaccactgtatgctgctgaagcaaagagggtctttgcattggaaaagcgcatctctaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaattgttagaggcgctcctgggactggaaaatcattagcaactggcatcatctcccgagccattgccgaaaaataccactccagtgtgtactctctaccaccagaccccgaccatttcgatggttacaaacaacaggtagttacagtcatggatgacttgtgtcaaaatccagatggtaaagatatggctctattttgtcaaatggtttctacagttgattttattcccccaatggcatcgttagaagagaagggtgtctccttcacctctaaatttgtgattgcttccacgaacatgagcaatatcatagtccccacagtatcggatgctgatgctattagaaggagattctacatggattgtgacatagaagtcactgattcatacaaattggagtctggaaggcttgatgcaggtagagctgcaaaattgtgctcagaaaacaatactgccaacttcaagaaatgcagccctttagtctgtgggaaagcaattcaactcagagatagaaagacaaaggttagatacagcctagattcagtagtctccgagctcataagggaacacaataacaggtcagcaattggtaacaccattgaagctttgttccaagggcccccagtttttaaaccagttaggatc---tccttagaggaaaagccagcaccagatgctattagtgatcttttgaagagtgtggatagtgaagaggtgagacaatactgc-agagatcagggatggatagtgcctatccaaccaaccaatgtggagaaacaccttgggagagctgtgctaataatgcaatccatcgctacagttgttgcagttgtgagtctagtgtatgtcatctataagctatttgctggattccaaggtgcttactctggcatgcccaagcaaaatgttaagaaaccagtcctcaggacagcaacagtgcagggaccgagcctagactttgccctttccctactcaggaggaacattagacaagtgcagacagatcagggccatttcaccatgttaggtatcagagatcagatcgcagtgctaccgcgacacgcccttcctggcaagcaaatttggattgaacataaactagtcaatgttttagatgcagtggaactagtagatgagcaacaggttaatttggaactcaccttagtgactttggacaccaatgagaaattcagagacattactaaatttataccagagcaaattgagggctctcccgatgctgtcctagtgatcaacactgaaaccatgccatcaatgtttgtccctgttggggacgttaccgaatatggcttccttaacctcagtggcagaccaacccaccggaccatgatgtacaatttcccaactagggcaggacagtgtggaggagtcgttacctctgtcggcaagatagtggggattcacattggaggaaatggtagacagggattctgcgcggctttaaagcgaggctactttataactgaacaaggtgaaatccagtggatgaagcccaacaaagagacaggcaatttcaacattaacggtccaaccaagaccaagcttgaacccagcgttttccatgatgtgtttgagggagtcaaagaaccagcagtcctccattccaaggacaagagacttgaagttaattttgaaactgccctcttctccaaatacatagggaacaagatccatgagccagatgaatacatgattcaagctgcaaaccattacgcagaccagctcaaacaattagacattgatacatcaaagatgagcatggaagatgcttgctatggaacagaattcctagaaggaattgatctggcaacaagtgcaggatacccctacaacgcattggggattaagaagagggacatcttgaacccccaaactagggatgtgaccaaaatgaaaatgtacctggataaatacggcattgacctcccttattccacttatatcaaggatgagcttagagctaaagacaagattaagaaaggaaaatccagactaattgaagccagtagtattaatgattcagtttaccttagaatgtgttttggccacttgtatgagaaatttcatgcaaacccggggacaatcactggatcagcagttggttgcaacccagatactttctggagtaaaatccctataatgctccctggttctctctttgcttttgattatactgggtatgatgctagtctttctcctgcttggtttagggctttggaaattgtccttaaaagattaggttatgatcaagatgctatttccttgattgagggaatcaatcactcccatcacatttacagaaatcaaacatactgtgtaatgggtgggatgccatctggatgttctggtaccagcatttttaattccatgattaataacataataatcagaactctcttaatcaagactttcaaaggaattgatctagatgaattaaacatgattgcatatggggatgatgtccttgctagctaccccttccctatcgactgtgctgagcttgcaaaaacaggattggaatatggcttagttatgacaccagctgataagtctgcttgctttaacgaagtgaactgggagaatgcaacatttctcaagagaggatttaaaccagatgaacaatatccattcctcatccacccaaccatgccaatgaaggagatacacgaatccattcgctggactaaagacccacgtaacacacaagaccacgtgcggtcactgtgtctcctagcgtggcacaatggtagggaaacctatgaggaatttgttggtaaaattagaactgtaccgattggcaaaattttagctcttccaaattatgacaacttgagaagaaattggcttgaattgtttt-----aatgataatttg--------------------------aa---------------ttgatgtt-aattggcaaaacctttggtgcaccct-g-ggcttgacaaa---gtcg--------ccaaagat-caattac-cc-taaccca-g-tggggt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY697458.1_Human_enterovirus_76_polyprotein_gene_complete_cds
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacaccggtattacggtacccttgtgcgcct-g-ttttata-----taccc---t---cccc-c--------tt-gtaacttagaagaaacaaataaac---------------gatcaa-tagtaggcttagcgcaccagctaagtcttga-tcaagcacctctg-ttaccccggactgagtatcaataagctgt-acccacggctgaaagagaaaacgttcgttatccggctatctacttcgggaaacc-tagtaccatcatgaagattgcaaagcgtttcgctcagca--caa-cccc---agtgtagatcaggtcgatgagtcactgca-ttccccacaggcgactgtggcagtggctgcgttggcggcctgcctac--------ggggaaa-cccgtaggacgctttaatgttaacatggtgcg-aagagtctactgagctaggtagtagtcctccggcccctgaatgcggctaatcctaaccacggagcaggtgctcacactcca-gtgag-tggcctgtcgtaacgcgcaagtctgtggcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttatcatggctgcttatggtgacaatc-ta-------agattgttatcatatagctattggattggccatccgg--tgaactctagagatattatt-----tacttg----tttgtt-ggttttatcaagt-----taaatat--------------caccagttacacc-actctcctttacattgtactactgaacaatagaaaga-gaaaatgggagctcaagtgtctactcagaaaaccgggtctcacgagaaccaaaatgttgctgcta-atggttccaccataaactataccaccatcaattattacaaagagtcttatgcagcatctgccaccaaacaggatttttcccaggatccatcaaagtttacacaaccagtagtggacgcattgaaagaaactgcaccacccttgaagtctccatccgctgaggcatgtggttatagtgatagagtcgcgcaattgactgtagggaattccacaatcacaacacaggaggcagccaatatcactgtaggttatggagaatggccagagtattgccctgatactgatgctactgcagtggacaaacccactcgacctgatgtgtctgtcaataggttctacaccctaccagccaagttgtgg---------accaaaacaggaaccggctccaagggatggtactggaaattccctgacgtgctcacagaaaaaggagtattcgggcagaatgcacaattccatttcttatacagatcagggttctgtatccatgtgcagtgcaatgctagcaaattccaccaaggtacactgttagttgcttgtctcccagagtacgttaatgctcgcgcaagtactaacagtactaatgcaa---ctgcaccccacccaccgtatgccacaacacaaccaggccccaatggtaaagaattagctttcccatatgtattggatgcaggaatacccattaaccagctattgattgcaccacaccaatggatcaatttgcgcacgaataactgtgctaccatagtcatgccatacattaatgcagtgccctatgactctgccctcaaccattgcaattttgggttgtttgtgattccagtggctcctctcaattactctgatggagcaacaactgccatacccatcacagtcaccattgcccctctttgctcagagtttggaggtcttaggcaggccatcacacaaggtcttccagcagaacttaaaccaggcaccaaccagtttttgactaccgacaatggggtttcagcaccaatattacctggttttcaccccactccagcaattcacatccctggagaagtgcacaacctgttagagattgcacaagttgaaagtatacttgaggtcaacaa----------cctgagttcactagaaacacctgacacactaatgcagaggttgtt------aatcccagtggaggctaaatcatcaccagacactttatgtgctagctttaaggttgacccaggtagagatggtccatggcaatccacgctggtcggacaaatttgcaaatactacacacaatggtctgggtcgttggaagtcacattcatgttcactgggtcatttatggctactggtaagatgttgattgcttatacaccaccgggaggtgcgcagcctaccacgagagaccttgccatgttgggcacacacgtgatctgggactttggtctacaatcatcagtcactttagtaataccttggatcagcaatagtcattttagaacacaggcaacaggtggattttttgattactatgcctcaggagttgttaccatctggtatcagacaaactttgtggtgccatcaggagctcctaccagtgcatacattattgctctgggcgcagcccagaagaatttcactctcaggttatgtaaagacactgaggccatctcacaaactgcaatattacagggtgatcca--------gtggaggacatgatta---acactgcagt--------------------------cagcaacacactgtcgcagaccatagggaggcctcaaacccag--------acaactgctgagaacaccagacctagcacgcatcagattggcacaggggaagttccagctctccaagcggctgaaactggagccacttccaataccacagatgagaatatgattgaaaccagggcagtcatcaataagcatagcactgaagagacttgcattgagcactttttctccagagcaggccttgtgagcatgatctcccttctcgtgtccgaagagac----gactcaggcttatgccaactgggaaattgacacaatgggtttcgttcaaatgagaagaaagcttgaaatgttcacatatatgaggttcaatgctgaattcacatttgttgccacaggactcaatggtacagccccccagacaatgctgcagtacatgtatgttccacccggtgcacctgtaccgacggatagagattcctttcaatggcagactgctactaatccctctgtatttgtcaagatgtcagaccccccagcccaagtgtctgtcccatttatgtcaccagcaagtgcttatcagtggttctatgacgggtaccccacattcggttcacaccctgtgtcagaagatctcagatacggaatcagcccaaacaataaaatgggcactttctcaattagagtggttgggtccggtcagctcacagaggctgttgtaattagaattttcatgcgcattaagcacgtgcgcgcctgggtcccgaggcccattcgatcccagaagtacatagtgaaaaattaccccaactttgatccagccgtcaaaccacac-------agcaccagtaggaatagcataactaccaa---------------------------------------cacagga------------------------------------------gcatttggacaacagtcaggagcaatttatgtcggaaattacagaattgtcaacaggcacctggcaacaagaaaagactgggagaacttagtgtgggaatcttatgaaagagatctacttgtctccactaccactgcccatggttgtgataagattgccagatgcaagtgtagagctggggtgtacttttgtaaatcaatgaacagacactaccctgtcaccttcggtgaaccagctttcttccatgtagatgctaatgagtactacccagaaaggtatcaatcacatgtaatctcatcagctggcatcgccttaccaggcgattgtggaggcatcctcaggtgtgagcacggggtcattgggatcgtctcaattggcggccctaacctggttggcttcgcagatatcagagacttactgtggctagatgatgaggttatggagcaaggagtcacagactacataaag-ggtttgggtgacgcttttggaactggcttcactgattcaatctctagggaaattaatcaacttaaaaattacctattaggctcagagaatgtagtggagaaaattttgaaagctttaatcaaagttgtctcagcactagtaattgtagttagaagtgactatgaccttgtaacattaactgctaccttggcgcttatagggtgtcatggaagcccgtggaaatggctcaagcacaaggtgtcaacactcctagacatacctatggcagagaagcaaagtgattcttggctcaaaaagttcactgaattcgccaatgctgctaraggcctagagtggatttcaaataaaatcagtaaattcattgattggattaaggacaaaatcattccagccgccaaggaaaaggtggaatttttaaacaatttaaagcaactcaca-ctccttgagaaccagatctctaacattgaacagtctgctgcaagccagagtgatttggaacagctatttggaaatgtctcatatctagctca---------ttactgtagaaagttccaaccactgtacgccgctgaggcaaagagggtctttgcactggagaaacgtatctccaattacatgcagttcaagagcaaacaccgtattgaacctgtatgcttaattgttagaggtgctcctggaactgggaagtcactagcaactggtattatctctcgagccattgctgaaaaataccactccagtgtgtactctctaccaccagaccctgatcactttgatggttacaaacaacaggcagttacagtcatggatgatttgtgtcaaaatccagatggtaaagatatggctctattttgtcaaatggtttctacagttgatttcattcccccaatggcatcattagaagagaagggtgtctccttcacctctaaatttgtaattgcttccacaaacatgagcaacatcatagtccctacagtgtcagatgctgatgctattagaaggagattttacatggattgtgacatagaggtcactgactcatacaaactggaatctggaaggttggatgcgggcagagccgcaaaattgtgctcagagaacaacactgccaactttaagaagtgcagccctttagtctgtgggaaagcaattcagctcagggatagaaagacaaaagttagatacagcctagattcagtagtctccgagctcataagagagtacaacaatagatcagcaattggtaacaccattgaagctttgttccaaggtcccccagtcttcaagccagtcaggatc---tccttagaggagaaaccagcaccagatgctatcagtgacctcttgaaaagtgtggacagtgaggaagtgaggcagtactgc-agagatcagggatggattgtacccgttcaaccaaccaatgtggaaaagcaccttggaagagctgtactaataatgcagtctattgccacagttgttgcagttgtaagcttggtgtatgttatctacaagctatttgcagggttccaaggtgcctattctggcatgcccaaacaaaacgttaagaaaccagtccttagaacagctacagtgcagggaccgagtctagacttcgctctctccctgctcagaagaaacatcagacaagtgcagacagaccagggtcatttcactatgctaggcattagagatcagattgcagtgctaccacggcacgcccttcccggtaaacaaatttggatcgagcataaattagtcaatgttttagatgcagtagagctagtagatgagcaacaggtcaatttggaactcactttagtgaccctagatactaatgagaaattcagagacatcaccaagttcataccagaacaaattgagggttctcctgatgctgtcttagtgatcaacactgaaaccatgccatcgatgtttgtcccagttggggacgtcaccgaatatggcttccttaaccttagtggcagaccaactcatcggaccatgatgtacaatttcccaacyagggcaggacagtgtggaggagtcgtcacctctgtaggcaaggttgtggggattcacattggaggaaatggtaggcagggattctgtgccgcccttaagcggggttactttacaactgagcagggtgaaatccagtggatgaggcctaacaaggagacaggcaattttaatatcaatggcccaaccaaaaccaagcttgaacctagtgtttttcatgatgtgttcaagggagtcaaagaaccggcagtcctccattctaaagataagaggcttgaagttgactttgaaaccgctcttttctccaaatatatagggaataagatccatgagccagatgagtacatgacccaagctgcaaaycactatgcagaccaactcaagcaattagacattgatacatcaaaaatgagcatggaggatgcttgttatggaacagagtttctggaaggaattgacctggcaacaagtgcaggatacccatacaatgcactaggcattaagaagagagacattctgaatcctcaaactagggatgtgaccaaaatgaaaatgtacttggacaagtacggtattgacctcccttattctacttatgtcaaggatgagcttagggctaaggataaaatcaagaaagggaaatctagattgattgaggctagcagcatcaatgattcagtttacctcagaatgtgttttggccacttgtatgagaaatttcatgccaacccagggacaatcaccggctcagcagtcggttgcaacccagatactttctggagtaaaatccccataatgcttcctggctctctatttgcttttgattatactgggtatgatgctagtctttctcccgcttggtttagggctttagaaattgttctcaaaagattaggttatgatcaagatgctatttctctgattgaggggatcaaccattcccaccatatttacagaaatcaaacgtactgtgtaatgggtgggatgccatctgggtgctccggtactagtatctttaattccatgatcaataacatcataatcagaactcttttaatcaagacctttaaaggaattgacttggacgaattaaatatgattgcatatggagatgatgttcttgctagctaccccttccccatcgactgtgctgaacttgcaaaaacaggactggaatatggtctagttatgacaccagctgacaagtctgcttgcttcaatgaagtgaattgggaaaatgcaacattcctcaagagaggattcaaaccagatgaacaatatccattccttattcacccaaccatgccaatgaaggagatacatgagtccattcgttggactaaggacccacgtaacacgcaagatcacgtgcggtcactgtgtctcctagcgtggcacaatggtagggagacctatgaggaatttgttgataaaatcagaactataccaattggcaaagtcttagctcttccaaattatgacaacttgagaagraactggctygaactgtttt---a-aacagcaatttg--------------------------aa---------------tttatgtt-aattggcaacatctttggtgcaccct-g-ggcttgacaaa---gtca--------ccaaagat-caattac-cc-taaccca-g-tggggt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX390654.1_Human_enterovirus_90_isolate_01336/SD/CHN/EV90_polyprotein_gene_complete_cds
-----------------tttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagcacaccggtatctcggtacccttgtgcgcct-g-ttttata-----caccc---t--tcccc-ct-------tt-gtaacttagaagaaatgaacaaat---------------gatcaa-taggaggcttagcacaccagctaggtcttga-tcaagcacttctg-ttaccccggactgagtatcaataagctgt-atccacggctgaaagagaaaacgttcgttatccggccatttacttcgggaaacc-tagtaccatcatgaaggttgcaaagcgtttcgctcagca--caa-cccc---agtgtagatcaggtcgatgagtcaccgca-ttccccacaggcgaccgtggcagtggctgcgttggcggcctgcccat--------ggggcaa-cccataggacgcttcaatgttgacatggtgtg-aagagtctattgagctaagtagtaatcctccggcccctgaatgcggctaatcctaaccacggagcaggcgctcacactcca-gtgag-tggcctgtcgtaacgcgcaagtctgtggcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttataatggctgcttatggtgacaatc-ta-------agattgttatcatatagctattggattggccatccgg--tgaattctagagatattatc-----tactta----tttgtt-ggttttaccaagt-----ttaatat--------------cactagttatacc-actctcctttatatcatacaattgaatagtagaaaga-gaaaatgggagctcaagtctcaacccaaaagactggatctcatgagaaccagaacatagctgcta-gcggttttaccataaattacacaaccatcaactattataaggattcctacgccgcttcagctgcaaaacaagatttctctcaagacccctccaagttcactcaacctgttgtagatgctctcaaagaaacagctccaccactcaaatcaccatcagctgaagcatgtggctatagtgatagggttgctcaattaacactaggtaattccaccatcacaacccaggaggccgccaatattacagtcggatatggtgaatggcccgagtattccaaggacactgaggccacagcagttgacaaacctaccaggccagatgtgtcagtcaatagattctacacactcccagcaaaattatgg---------gctagta---------actccaaaggatggtattggaagtttccagatgttctctgtgagttgggagtatttggtcaaaacgcacagtatcattacttgtataggtctggattctgcatacatgtacagtgtaatgctagtaaatttcatcaaggcgcactcttagtggctgttataccagaattaatgcttgctaggtcgagtgctgacactaacccagcca---ctgccccccatccaccatataatgctacacaacctggagaggcgggtaaggagtttgctttcccttacgttcttgactctggcatcccactgtctcaagctctgatcttccctcatcagtggatcaacttgcgcactaacaactgtgctactatagtcatgccctatattaactgtttaccctttgactcagccctgaaccactgtaacttttccttggtggttataccaatcgcaccactcgcttataatgaaggagccactactgctatacctattactataactgttgctccaatgtgctcagaattcagtggcctcaggcaagctgtgtctcagggtctaccggctgagctgaaacctggaactaaccaattcctgactacagatgacggagtctcagcaccgattctacctggtttccacccaaccccagagatgcacatcccaggtgaagtgaagaaccttttagaaatctgtcaagtggagtccattcttgaggttaacaa----------ccttaccactaataaagcagctgaccaactcatgacgcgcctgttgataccagtgcaagcgcaaactg------cagtggatacactctgcgcagccttcaaagttgaccctggtcgcgatggaccgtggcaatcaacattagtgggtcagatatgcagatattacacccaatggtcagggtcccttgaagtgacattcatgttcactggtagtttcatggcaacagggaaaatgctcatcgcctacaccccaccgggtgcgccacaacctgccaacagaaggaccgcaatgttagggacgcatgtgatttgggattttggtctacaatcatctgtcaccttggtgatcccctggatcagcaacacacattacagagctatgggtagtaatgactattttgactactactctgcaggtattgtaacaatttggtatcagaccaactttgtggtgccatcaggagccccaacatcagcttacattgttgcccttgctgctgctcagaagaactttacattgagattgcccaaagacactggtgacatttcacaaactgctatcctacaaggtgaccct--------gttgaagaggccatca---ataacacagt--------------------------tgctggaacactaaatcgagc---actaggaggtgcaacacac--------acaacagcccaaaacacacagcaaagtagccaccagattggaacaggagaagtccccgccctgcaagcagcagagactggggctacatccaacacctcggatgaaaacatgctggaaacccgctgtgtggttaactcccacagcgtggctgaaactagtgtctcgcacttcttttccagagctggattagttggtatgcttgatctactaacatcagaaaaaac----taatatagggtttacaacctgggacattgacattatgggatttgttcagcagcgcaggaaactggagatgttcacatacatgagatttgatgcagagttcactttcttaactgtgggagcgactggcgctgcgccagccaccgttattcagtacatgtatgtaccaccaggtgcacccaaacccactcaacgtgattcctttgaatggcagactgcgaccaatccttccatctttgttaaaattagtgatcctccagcccaggtttcggtacccttcatgtcacctgcagcagcatatcaatggttttacgatggataccccacattcggcaatcacccaactaatcaagacttcagatatggaatctgccccaacaatctcatggggactttctgcgtgcgggttcttggttcagagaaacttaccgaggctctcagagtgcgcatctatatgcgcatcaaacacgtcagagcatgggtccctagaccacttaggtcacaaaaatatcttctgaagaattacccaaatttcgatggggc----taatatcacacctactagtgcatctagatccagcat---cacaac---------------------------------------agctggt------------------------------------------gcatttggtcaacaatcaggagcagtctatgttgggaattacaaaatagttaacagacatctagcaactaaagaagattggagcaacttagtctgggaagactacaacagggatctcttagtgaccagtgtgtgtgcacaaggttgtgacactatagcacgttgctcgtgcaaggcaggtgtttacttctgcaagtccatgaacaagcattactccatcagtttccagggacctggaattgtcgaggttcaagccaatgaattttacccacacagataccaaacccatgttctacttgggcatggcacatcaataccaggggactgtggtggcatccttagatgccaacacggtgttattggtctggtgaccatggggggtgatggcttggttggtttcgcagaccttagagacctgttttggctcgacgatgaagcgatggaacagggggtcacagattacatcaag-ggacttggcgatgctttcggcacaggattcaccgattccatttctagggagattcagcaactaaaaaattacctcttgggttcggaaaatgtagtagagaagatccttaaagcattaatcaaagtagtttcagcattagtgatagttgttaggagtgactatgacctaatcaccctgactgcaacccttgctttaattgggtgtcacggaagtccttgggcctggctcaaatccaaagtttccaatctacttgatattcccattgcacaaaagcaaagtgactcatggctcaagaaatttacagagatggctaatgccgccaggggtcttgaatggattgcaaataaaatcagcaagtttatagactgggtgaaagagaagattgtcccagctgctaaagaaaaagtggaattcctctccaacctcaagcaattgccc-ttgctagagacccagattgctaacattgaacaatcagcagctagtcaggaagatctagaaaatctattcagtaatgttgcctacttagccca---------ttattgcagaaagttccagccgctctacgcctcagaggcaaagagaatctatgccatggagaaaagaatcaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgcttaataattagaggaccccctggcactggcaagtcactagcgacaggcatcattggtagagctattgcagaaaagtaccattctagtgtatattccctacctccagacccggaccattttgatggttacaagcagcaagcggtcacagtgatggatgacctttgtcagaatccagatgggaaggacatgtcactcttttgccagatggtctctacagtagaattcattccacccatggctagcttggaagaaaaaggtgtttcattcacttcaaaatttgtgattgcctccaccaactcatccaacatcatagtcccaactgtctcagatagtgatgccattagaaggaggttctatatggattgtgacattgaggttcccgagtcatttagaacaccccaagggaggttggatgctgctagagctgccaaactttgttcagaaaacaacactgctaactttaagaagtgcagccccctggtttgtggtaaggccattcaacttagggataggaaatcaggagtcagatatggtttggactctgttgtctcagaactaattagagaatataacaaccgctcggcagtaggcaataccatagaggcacttttccaaggcccaccccaattcaaaccggttaggata---accct---tgacaaaccagcgccagatgcaattagtgatcttctggcaagtgtggatagtgaagaggtcagacaatattgt-agggaccaggggtggattattccagaaaagcccaccaacattgagagacatgtgaatagagctctaatgatcctacaatcagtcactactgtagttgcagtgatttcacttgtgtacgtcatttacaaactctttgctggattccaaggtgcctactcggggatgcccaaaacagcagtcaagaaaccagtactgagaaccgctgtggcccaagggcctggattagactttgctctctctctgttgaagaagaatatcaggaagtgccaaacaaaccaggggcacttcaccttgttaggaattagagacagactggctgtactcccaagacatgcttcaccaggagattcaatttggatcgagcataagcaggttaaagtcttggatgctgttgagttggtagatgaacaacaggttaatcttgaactcacattgatcacccttgataccaatgagaaattcagagatatcacaaaattcatccctgagcaaattgagggaactgttgacgccacccttgttatcaacacggaagccatgccatcaatgtttgtcccagttggtgacgttcaacagtacggctttcttaacctcagtggcaaaccaacacatagaaccatgatgtacaacttcccaactaaagcaggacagtgtggtggagtggttacttcagtggggaagattgtaggcatccacatagggggtaatggccgccaaggtttctgtgctgcactcaaacgtagttacttcgcctccgagcaaggtgagattcaatggatgaggtctaataaagagacaggtaatttcaacatcaacggtcccaccaaaaccaaactcgaacccagtgtttttcatgaagtgtttgaaggagttaaagaaccagcagtccttcactccaaagacaagaggcttgaggttgattttgaaactgctcttttctctaaatacataggaaacaagattcatgagccagatgaatacatgattcaagctgcaagccactatgcagaccaactcaaacagttagacattgatacatcaaaaatgagcatggaggatgcttgttatggaacagattttctagaagggattgatttggcaacaagtgcagggtacccttacaatgcactaggtatcaagaagagagacattctaaatccccaaactagggatgtaaccaaaatgaaaatgtacttggacaaatatggtattgacctcccttattctacttatgttaaggatgagcttagagctaaggacaaaatcaagaaaggaaaatccagattgattgaagctagtagcatcaatgattcagtttaccttagaatgtgcttcggtcacctatatgagaaattccatgccaatccagggacaatcactggttcagcagttggttgtaatccggacactttctggagtaagattcctataatgctccctggctccctttttgcttttgattatactgggtatgatgctagtctttctcctgcttggtttagggctttagaaattgttctcaaaagattaggttatgatcaagatgctatttctctgattgaggggatcaaccactcccaccacatttacaggaatcagacgtactgtgtaatgggtggaatgccatctgggtgctctggtactagcatttttaattctatgattaacaatattataatcagaactcttttgatcaagaccttcaagggaattgatttggatgaattaaacatgattgcatatggagatgatgttcttgctagttaccccttccctatcgactgtgctgaactcgcaaaaacaggattggaatatggcttggttatgacaccagctgataagtccgcctgcttcaatgaagtgaattgggagaatgcaacattcctcaagagaggattcaaaccagatgaacaatacccattcctcatccacccaaccatgccaatgaaggagatacatgagtccattcgctggactaaggacccgcgtaacacacaggatcacgtgcggtcattatgtctcctagcatggcataatggtagggaaatctacgaggaatttgttgataaaattagaactgtaccaattggcaaagttttagctcttccaaattatgacaacttgagaagaaattggctcgaattgttct---a-aataacaatttg--------------------------aa---------------tttgtgtt-aattggcaacatctttggtgtaccct-g-ggcttgacaaa---gtca--------ccaaagat-caattac-cc-taaccca-g-tggggt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX390656.1_Human_enterovirus_90_isolate_03446/SD/CHN/EV90_polyprotein_gene_complete_cds
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcacaccggtatcacggtacccttgtgcgcct-g-ttttata-----caccc---t--ccctc-ct-------tt-gaaacttagaagaaataaacaaat---------------gatcaa-taggaggcttagcacaccagctaggtcttga-tcaagcacttctg-ttaccccggactgagtatcaataagctgt-acccacggctgaaagagaaaacgttcgttacccgactatctacttcgggaaacc-tagtaccatcatgaagactgcaaagcgtttcgctcagca--caa-cccc---agtgtagatcaggtcgatgagtcactgca-ttcctcacaggcgactgtggcagtggctgcgttggcggcctgcctat--------gggaaaa-cccataggacgctttaatgttgacatggtgcg-aagagtctactgagctaggtagtagtcctccggcccctgaatgcggctaatcctaaccacggagcaggtgctcacactcca-gtgag-tggcctgtcgtaatgcgtaagtctgtggcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttgtcatggctgcttatggtgacaatc-ta-------agattgttatcatatagctattggattggccatccgg--tgaattctagagatattatc-----taccta----tttatt-ggtttcaccaagt-----taaatat--------------cactagttatacc-actctcctttatatcatacaattgaatagtagaaaga-ggaaatgggagctcaagtctcaacccaaaagactggatctcatgagaaccagaacatagctgcta-gcggttctaccataaattacacaaccatcaactattataaggattcctacgccgcttcagctgcaaaacaagatttctctcaagacccctccaagttcactcaacctgttgtagatgctctcaaagaaacagctccaccactcaaatcaccatcagctgaagcatgtggctatagtgatagggttgctcaattaacactaggtaactccaccatcacaacccaggaggctgccaatatcacagtcggatatggtgaatggcccgagtattccaaggacactgaggccacagcagttgacaaacctaccaggccagatgtgtcagtcaatagattctacacactcccagcaaaattatgg---------actagta---------actcaaaaggatggtattggaagtttccagatgttctctgtgagttgggagtatttggtcaaaacgcacagtatcattacttgtataggtctggattctgcatacatgtacaatgtaatgctagtaaatttcatcaaggcgcactcttggtggctgctataccagaattaatgcttgccaggtcgagtgctgacactaacccagcca---ctgccctccatccaccatataatgctacacaacctggagaggcgggtaaggagtttgctttcccttacgttcttgactctggcataccactgtctcaagctctgatcttccctcatcagtggatcaacttgcgcactaacaactgtgctactatagtcatgccctatattaactgcttaccctttgactcagccctgaaccactgtaacttttccttggtggttataccaatcgcgccactcgcttataatgaaggagccactactgctatacctattactataactgttgctccaatgtgctcagaattcagcggcctcaggcaagctgtgtctcagggtctaccggctgagctgaaacctggaactaaccaattcttgactacagatgacggtgtctcagcaccaatcctacctggtttccacccaaccccagagatgcacatcccaggtgaagtgaagaaccttttagaaatttgtcaagtggagtccattcttgaggttaacaa----------ccttgccactaataa---agctggccaactcatgacgcgcctgttaataccagtgcaagcgcaaactg------cagtggacacactctgcgcagccttcaaagttgatcctggtcgcgatggaccgtggcaatcaacattagtgggtcagatatgtagatactacacccaatggtcagggtcccttgaggtgacattcatgttcactggtagtttcatggcaacagggaaaatgctcatcgcctacaccccaccgggtgcgccacaacctgccaacaggaggaccgcaatgttagggacgcatgtgatttgggattttggtctacaatcatctgttaccttggtgatcccctggattagcaacacacattacagagctatgggtagtaatgattattttgactactactctgcaggtattgtaacgatttggtatcagaccaactttgtggtaccatcaggagccccaacatcagcttacattgttgcccttgctgctgctcagaagaactttacattgagattgcccaaagacactggtgacatttcacaaactgctatcctacaaggtgaccct--------gttgaagaggccatca---ataacacagt--------------------------tgctggaacgctaaatcgagc---actaggaggtgcaacacac--------acaacagcccaaaacacacagcaaagtagccaccagattggaacaggagaagtccccgccctgcaagcagcagagactggggctacatccaacacctcagatgaaaacatgctggaaacccgctgtgtggttaactcccacagcgtggctgaaactagtgtctcgcacttcttctccagagctggattagttggtatgcttgatctgctaacatcagaaaaaac----taatatagggttcacaacctgggacattgacattatgggatttgttcaacagcgcaggaaactggagatgttcacatacatgagatttgatgcagagttcaccttcttaactgtgggagcgactggcgctgcgccagccaccgttattcagtacatgtatgtaccaccaggtgcacccaaacctactcaacgtgattcctttgaatggcagactgcgaccaatccttccatctttgttaaaattagtgatcctccagcccaggtttcggtacccttcatgtcacccgcagcagcatatcaatggttttacgatggataccccacattcggcgatcacccaactaatcaagacttcagatatggaatctgtcccaacaatctcatggggactttctgcgtgcgggttcttggttcagagaaacttaccgaggctctcagagtgcgcatctatatgcgcatcaagcacgtcagagcatgggtccctagaccatttaggtcacaaaaatatcttctgaagaattacccaaattttgacggggc----taatatcacacctactagtgcatctagatccagtat---cataac---------------------------------------agctgga------------------------------------------gcatttggtcaacaatcaggagcagtctatgttgggaattacaaaatagttaatagacatctagcaactaaggaagattggagcaacttggtctgggaagactacaacagggatctcttagtgaccagtgtgtgtgcacaaggttgtgacattatagcacgttgctcgtgtaaggcaggtgtttacttctgcaagtccatgaacaagcattaccccatcagtttccagggacctggaattgtcgaggttcaagccaatgaattttacccacacagataccaaacccatgttctacttgggcatggtacatcaataccaggggactgtggtggaatccttagatgccaacacggtgttattggcctggtgaccatggggggtgatggcttagttggtttcgcagaccttagagacctgttttggctcgacgatgaagcgatggaacagggggtcacagattacatcaag-ggacttggcgatgctttcggcacaggattcaccgattccatttctagggagattcagcaactaaaaaattacctcttgggttcagaaaatgtagtagagaagatccttaaagcattaatcaaagtagtctcagcattagtgatagttgttaggagtgattatgatctagtcaccctgactgcaacccttgctttaattgggtgtcacggaagtccttgggcctggctcaaatccaaagtttccaatctacttgatattcccattgcacaaaagcaaagtgattcatggctcaagaaatttacagagatggctaatgccgccaggggtcttgaatggattgcaaataaaattagcaagtttatagactgggtgaaagaaaagattgtcccagcagctaaagaaaaagtggaattcctctctaacctcaagcaattacct-ttgctagagacccagattactaacattgaacaatcagcagctagtcaggaagatctagaaaatctattcagcaatgttgcctacctagccca---------ttattgtagaaagttccagccgctctacgcctcagaggcaaagagaatctatgccatggagaaaagaatcaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgcttaataattagaggaccccctggcactggcaagtcactagcgacaggcatcatcggtagagctattgcagaaaagtaccattctagtgtatactccctacctccagacccggaccactttgatggatacaagcagcaagtggtcacggtgatggatgacctttgtcagaacccagatgggaaggacatgtcactcttttgccagatggtctctacagtagaattcattccacccatggctagcttggaagaaaaaggtgtttcgttcacttcaaaatttgtgattgcctccaccaactcatccaacatcatagtcccaactgtctcagatagtgacgccattagaaggaggttctatatggattgtgacattgaggttcctgagtcatttagaacaccccaagggaggttggatgctgctagagctgccaaactttgttcagaaaacaacactgctaactttaagaagtgcagccccctggtttgtggtaaggccattcaacttagggataggaaatcaggagtcagatatggtttggactctgttgtctcagagctgatcagagaatacaacaaccgctcggcagtaggcaataccatagaggcacttttccaaggcccaccccaattcaaaccggttaggata---accct---tgacaaaccagcgccagatgcaattagtgatcttctggcgagtgtggatagtgaagaggtcagacaatattgt-agggaccaggggtggattattccagaaaagcccaccaacattgagagacatgtgaatagagctctaatgatcctacaatcagtcactactgtagttgcagtgatttcacttgtgtacgtcatttacaaactctttgctggattccaaggtgcctactcggggatgcccaaaacagcaatcaagaaaccagtactgagaaccgctgtggcccaagggcctggattagactttgctctctctctgttgaagaagaacatcaggaagtgccaaacaaaccaggggcacttcaccttgttaggaattagagacagactggccgtactcccaagacatgcttcaccaggggattcaatttggattgagcataagcagattaaagtcttggatgctgttgagttggtagatgaacaacaggttaatcttgaactcacattgatcacccttgataccaatgagaaattcagagatatcacaaagttcatccctgagcaaattgagggaactgttgacgccacccttgttatcaacacggaagccatgccatcaatgtttgtcccagttggtgacgttcaacagtacggctttcttaacctcagtggcaaaccaacacatagaaccatgatgtacaacttcccaactaaagcagggcagtgtggtggagtggttacttcggtgggaaagattgtaggcatccacatagggggtaatggccgccaaggtttctgtgctgcactcaaacgcagttacttcgcctccgagcaaggtgagattcagtggatgaggtccaataaagagacaggtaatttcaacatcaacggtcccaccaaaaccaaactcgaacccagtgttttccatgaagtgtttgaaggagttaaagaaccagcagtccttcactccaaagacaagaggcttgaggttgattttgaaactgctcttttctctaaatacataggaaacaagatttatgagccagatgaatacatgatccaagctgcaaaccactatgcagaccaactcaaacagttagatattgatacatcaaaaatgagcatggaggacgcttgttatggaacagattttctagaagggattgatttggcaacaagtgcagggtacccttacaatgcactaggtatcaagaagagagatattctaaatccccaaactagggatgtgaccaaaatgaaaatgtacttggacaaatatggtattgacctcccttattctacttatgttaaggatgagcttagagctaaggacaaaatcaagaaagggaaatccagattgattgaagctagtagcatcaatgattcagtttaccttagaatgtgtttcggtcacctatatgagaaattccatgccaatccagggacaatcactggttcagcagttggttgtaatccggacactttctggagtaagattcctataatactccctggctccctttttgcttttgattatactgggtatgacgctagtctttctcctgcttggtttagggctttagaaattgttctcaaaagattaggttatgatcaagatgctatttctctgattgaggggatcaaccactcccaccacatttacaggaatcagacgtactgtgtaatgggtggaatgccatctgggtgctctggcactagcatttttaattctatgattaataatattataatcagaactcttttgatcaagaccttcaagggaattgatttggatgaattaaacatgattgcatatggagatgatgttcttgctagttaccccttccctatcgactgtgctgaactcgcaaaaacaggattggaatatggcttggttatgacaccagctgataagtctgcctgctttaatgaagtgaattgggagaatgcaacattccttaagagaggattcaaaccagatgaacaatacccattcctcattcacccaaccatgccaatgaaggagatacatgagtccatccgctggactaaggacccgcgcaacacacaggaccacgtgcggtcattatgtctcctagcatggcataatggtagggaaatctacgaggaatttgttgacaaaattagaactgtaccaattggcaaagttttagctcttccaaattatgacaacttgagaagaaattggctcgaattgttct---a-aataacaatttg--------------------------aa---------------tttgtgtt-aattggcaacatctttggtgtaccctgg-ggcttgacaaa---gtca--------ccaaagat-caattac-cc-taaccca-g-tggggt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>JX390655.1_Human_enterovirus_90_isolate_01421/SD/CHN/EV90_polyprotein_gene_complete_cds
-----------------tttaaaa--cag-cct-gtgggttg-c-acccacccaca-gggcccac-t-gggcgctagcacaccggtattacggtacccttgtgcgcct-g-ttttata-----caccc---t---cccc-ct-------tt-gtaacttagaagaaacaaacaaat---------------gatcaa-taggaggcttagcgcaccagctaggtcttga-tcaagcacttctg-ttaccccggactgagtatcaataagctgt-acccacggctgaaagagaaaacgttcgttacccggctatctacttcgggaaacc-tagtatcatcatgaagattgcaaagcgtttcgctcagca--caa-cccc---agtgtagatcaggtcgatgagtcactgca-ttccccacaggcgactgtggcagtggctgcgttggcggcctgcctat--------ggggaaa-cccataggacgctttaatgttgacatggtgtg-aagagtctactgagctagatagtagtcctccggcccctgaatgcggctaatcctaaccacggagcaggtgctcacactcca-gtgag-tggcctgtcgtaacgcgcaagtctgtggcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttatcatggctgcttatggtgacaacc-ta-------agattgttatcatatagctattggattggccatccgg--tgaattctagagatattatc-----tactta----tttgtt-ggttttaccaagt-----taaatat--------------cactagttacacc-actctcctttatatcatacaattgaatagtgaaaaga-gaaaatgggagctcaagtctcaacccaaaagactggatctcatgagaatcagaacatagctgcta-gcggttctactataaattacacaaccatcaactattataaggactcctacgccgcttcagctgcaaaacaagatttctctcaagacccctccaagttcactcaacctgttgtagatgctctcaaagaaacagctccaccacttaaatcaccatcagctgaagcatgtggctatagcgatagggttgctcaattaacactaggcaattccaccatcacaacccaggaggccgccaacattacagtcggatatggtgaatggcccgaatattccaaggatactgaggctacagcagttgacaaacctaccaggccagatgtgtcagtcaatagattctacacactcccagcaaaattatgg---------gctagta---------actctaaaggatggtattggaagtttccagatgttctctgtgagttgggagtatttggtcaaaacgcacagtatcactacttgtataggtctggattctgcatacatgttcagtgcaatgctagtaaatttcatcaaggcgcactcttagtggctgctataccagaattgatgcttgctaggtcgagtgctgacactaacccagcca---ccgccccccatccaccatataatgctacacaacctggagaggcgggtaaggagtttgctttcccttacgttcttgactctggcatcccactgtctcaagctctgatcttccctcatcagtggatcaacttgcgcactaacaactgtgctactatagtcatgccctatattaactgtttgccctttgactcagccctgaaccactgtaatttttccttggtggttataccaatcgcaccactcgcttataatgagggagccactacagctatacctattactataactgttgctccaatgtgttcagaattcagtggcctcaggcaagctgtgtctcaaggtctaccggctgagctgaaacctggaactaaccaattcttgactacagatgatggtgtctcagcaccaattctacctggtttccacccaaccccagagatgcacatcccaggtgaagtgaagaaccttttagaaatttgtcaggtggagtctattcttgaggttaacaa----------ccttacaactaataaagcagctgaccaactcatgacgcgcctgttgataccagtgcaagcgcaaactg------cagtggatacactctgcgcagccttcaaagttgaccctggtcgcgatggaccgtggcaatcaacattagtgggtcagatatgtagatattacacccaatggtcagggtcccttgaggtgacattcatgttcactggtagtttcatggcaacagggaaaatgctcatcgcctacaccccaccgggtgcgccacaacctgccaacagaaggaccgcaatgttaggaacgcatgtgatttgggattttggtctacaatcatctgtcaccttggtgatcccctggatcagcaacacacattacagagctatgggtagtaatgactattttgactactactctgcaggtattgtaacaatttggtatcagaccaactttgtggtgccatcaggagccccaacatcagcttacattattgcccttgctgctgctcagaagaactttacattgagattgcccaaagacactggcgacatttcacaaactgctatcctacaaggtgaccct--------gttgaagaggccatca---acaacacagt--------------------------tgctggaacactaaatcgagc---actaggaggtgcaacacac--------acaacagcccaaaacacacagcaaagtagccaccagattggaacaggagaagtccccgccctgcaagcagcagagactggggctacatccaacacctcggatgagaacatgttggaaacccgctgtgtggttaactcccacagcgtggctgaaactagcgtttcgcatttcttttccagagctggattagttggtatgcttgatctactaacatcagaaaaaac----taatatagggtttacaacctgggacattgacattatgggatttgttcaaaagcgcaggaaactggagatgttcacttacatgagatttgatgcagagttcactttcttaactgtgggagcgactggcgctgcgccagccaccgttattcagtacatgtatgtaccaccaggtgcgcccaaacccactcaacgtgattcctttgaatggcagactgcgaccaatccttccatctttgttaaaattagtgaccctccagcccaagtttcggtacccttcatgtcacctgcagcagcataccaatggttttacgatggataccccacattcggcaatcacccaaccaatcaagacttcagatatggaatctgccccaacaatctcatggggactttctgcgtgcgggttcttggttcagagaaacttaccgaggctctcagagtgcgcatctatatgcgcatcaagcacgtcagagcatgggtccctagaccacttaggtcacaaaaatatcttctgaagaattacccaaattttgatggggc----taatatcacacccactagtgcatctagatccggcat---cacaac---------------------------------------agctggt------------------------------------------gcatttggtcaacaatcaggagcagtctatgttgggaattacaaaatagttaacagacatctagcaactgaagaagattggagcaacttagtctgggaaaattacaacagggatctcttagtgaccagtgtgtgtgcacaaggttgtgacactatagcacgttgctcgtgcaaggcaggtgtttacttctgcaagtccatgaacaagcattaccccattagtttccaaggacctggaattgtcgaggttcaagccaatgaattttacccacacagataccaaacccacgttctacttgggcatggcacatcaataccaggggactgtggtggcatccttagatgtcaacacggtgttattggtctagtgaccatggggggtgatggcttggttggttttgcagacattagagacctgttttggctcgacgatgaagcgatggaacagggggtcacagattacatcaag-ggacttggcgatgctttcggcacaggattcaccgattccatttctagggagattcagcaactaaaaaactacctcctaggttcagaaaatgtagtagagaagatccttaaagcattaatcaaagtagtttcagcattagtgatagttgttaggagtgactatgacctagtcaccctgactgcaacccttgctttgattgggtgtcacggaagtccttgggcctggctcaaatctaaagtttccaatctacttgatattcccattgcacaaaagcaaagtgactcatggctcaagaaatttacagagatggctaatgccgccagaggtcttgagtggattgcaaataaaattagcaagtttatagactgggtgaaagagaagattgtcccagcagctaaagaaaaagtggaattcctctccaacctcaagcaattgccc-ttgttagagacccagattgctaacattgaacaatcagcagctagtcaggaagatctagaaaatctattcagtaatgttgcctacctagccca---------ttattgcagaaaattccaaccgctctacgcctctgaggcaaagagaatctatgccatggagaaaagaatcaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgcttaataattagaggaccccctggcactggcaagtcactagcgacaggcatcattggtagagctattgcagaaaagtaccattctagtgtatattccctgcctccagacccggaccattttgatggttacaagcagcaagtggtcacagtgatggatgacctttgccagaatccagatgggaaggacatgtcactcttttgccagatggtctccacagtagaattcattccacccatggctagcttagaagaaaaaggtgtctcattcacttcaaaatttgtgattgcctccaccaattcgtccaacatcatagtcccaactgtctcagatagtgatgccattagaaggaggttctatatggattgtgacattgaagttcccgagtcatttagaacaccccaaggaaggttagatgctgctagagctgccaaactttgttcagaaaacaacactgctaactttaagaagtgcagccctctggtttgtggtaaggccattcaacttagggataggaaatcaggagtcagatatggtttggattctgttgtctcagaactaatcagagaatacaacaaccgctcggcagtaggtaataccattgaagcacttttccaaggtccaccccaatttaaaccagttaggata---accct---tgacaaaccagcgccagatgcaattagtgatcttctggcaagtgtggatagtgaagaggtcagacaatattgt-agggaccaggggtggattattccagaaaagcccaccaacgttgagagacatgtgaatagagctctaatgatcctacaatcagttactactgtagttgcagtgatttcacttgtgtacgtcatttacaaactctttgctggattccaaggtgcctactcggggatgcccaaaacagcagtcaagaaaccggtactgagaaccgctgtggcccaaggacctggattagactttgctctctctctgttgaagaagaacatcaggaagtgccaaacaaaccaggggcacttcaccttgttaggaattagagacagactggctgtactcccaagacatgcttcaccaggagattcaatttggattgagcacaagcaggtcaaagtcttggatgctgttgagttggtggatgaacaacaggtcaatcttgaactcacattgatcacccttgataccaatgagaaattcagagacatcacaaaattcatccctgagcaaattgagggaactgttgacgccaccctcgttatcaacacggaagccatgccatcaatgtttgtcccagttggtgacgttcaacagtacggctttctcaacctcagtggtaaaccaacacatagaaccatgatgtacaacttcccaactaaagcaggacagtgtggtggagtggttacttcagtgggaaagattgtaggcatccacatagggggtaatggccgccaaggtttctgtgctgcactcaaacgcagttacttcgcctccgagcaaggtgagattcaatggatgaggtccaataaggagacaggcaattttaatattaatggcccaaccaaaaccaaacttgaacctagtgttttctatgatgtgtttgaaggtgtcaaagaaccagcagtccttcattccaaggataagaggcttgaggtcgactttgaaactgctctcttctccaagtatacaggaaacaaaattcatgaaccagatgagtacatgattcaggccgcaaaacattatgcagaccaactcaaacaactggatattgacacatcaaaaatgagcatggaggatgcttgctatggaacagaattcctggaaggaattgatttggcaacaagtgcagggtacccctacaatgcactgggcatcaagaagagagacattctgaacccccaaaccagagacgtgactaaaatgaaaatgtacttggacaaatatggcattgaccttccctactccacttatatcaaagatgaacttagagctagggacaaaattaagaaagggaaatctagattgattgaagctagtagcattaatgattcagtttaccttagaatgtgctttggccacctgtatgaaaaatttcatgcaaatccggggacgattactggttcggcagttggttgtaacccagacactttctggagcaagatccccataatgcttcctggttctctctttgcttttgattacactgggtatgatgctagtctttctcctgcttggtttagagctttagagattgttcttaaaagattaggttatgatcaagatgtcgtctcactgattgagggaatcaaccactcccaccacatttacagaaatcaaacatactgcgtaatgggcgggatgccatctggatgctcaggtaccagcatcttcaattctatgattaacaacatcataatcaggactcttctaatcaggacttttaaaggaattgatttggatgaattaaacatgattgcatatggagatgatgttcttgctagctaccccttccccattgactgtgctgaacttgcaaaaacaggattagaatatggcttagttatgacaccagctgataaatctacctgttttaatgaagtaaattgggagaatgcaacatttcttaagagagggttcaaaccagatgagcaatacccattcctcatccatccaaccatgccaatgaaggagatacatgagtccattcgttggactaaagacccacgtaacacacaagatcatgtgcggtcactgtgcctcctagcatggcataacggtagggaaacctatgaggaatttgttgacaaaattagaactgtgccaattggtaaagtcttagctcttccgaattatgataacttgagaagaaattggcttgatctgtttt---g-aataataattca--------------------------aa---------------attctgtt-aattggcaacatctttggtgtaccct-g-ggcttgacaaa---gtca--------ccaaagat-caattac-cc-taaccca-g-tggggt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY697460.1_Human_enterovirus_90_polyprotein_gene_complete_cds
------------------ttaaaa--cag-ctcttagggttg-t-tcccaccctag-aggcccacgt-ggcggctagcactctggtatcacggtacctttgtgcgcct-g-ttttata-----ccccc---c---tccc-cc-------at-gtaacttagaagctattaaataaa---------------gttcaa-tagaagggggtacaaaccagtaccaccacga-acaagcacttctg-tttccccgg--tgaagctacatagactgt-tcccacggttgaaagtggcag-atccgttatccgctttggtacttcgagaaacc-tagtatcatcttggaatcttcgatgcgttgcgttcagcactcaa-cccca-gagtgtagcttaggtcgatgagtctggacg-atcctcactggcgacagtggtccaggctgcgttggcggcctacctgt--------ggcgaaa-gctacaggacgc-tagttgtgaacaaggtgtg-aagagtctattgagctatcaaagagtcctccggcccctgaatgcggctattcccaaccacggagcaagtgctcacaaacca-gtgag-tggcttgtcgtaacgcgcaagtctgtggcggaaccgactactttgggtgcccgtgtttcc--tttt---atttttatcatggctgcttatggtgacaatc-ta-------agattgttatcatatagctattggattggccatccgg--tgactaacagagatatcata-----tattca----tttgtt-ggttttgttaaac-----tagactc--------------aactacattcaag-tctcttctcttcatcatacaattgaataatagaaaga-gaaaatgggagctcaagtctcaacccagaaaactggatctcacgagaaccagaacatagctgcga-gtgggtctaccataaattatacaaccattaattactataaggattcctatgccgcttcagctgcaaaacaggatttctctcaagatccctctaagttcactcaacctgtcgtagatgctctcaaagaggcagctccaccacttaaatcgccatcagctgaagcatgtggttatagtgatagagtcgctcagctaacactaggcaattctaccatcacaactcaagaggccgccaatatcacagtcggatatggtgaatggcccgaatattctaaggacactgaggctactgcagtggataagcctactagaccagatgtatcagtcaacaggttctacacactcccagcaaaattatgg---------gctagta---------actctaaagggtggtattggaaattcccagatgttctctgtgaactgggagtatttggtcaaaatgcacagtaccattacttgtacaggtctggattctgtatccatgttcagtgtaatgcaagtaagttccatcagggtacactcttagtggctgctataccagaattgatgcttgctaggtcaagtgctgacactaaccctgtca---ctgccccccatccaccatattatgcaacacaacctggggaggcaggtaaggagtttgctttcccttacgtccttgattctggtattccactgtctcaagctctaatcttccctcatcagtggatcaacttgcgcactaacaactgtgctaccatagttatgccctatattaattgcttgccctttgactcagccctgaatcactgcaacttttctctggtggtcataccagttgcaccactcgcttataatgaaggagctactacagctatacccattactataactgttgccccaatgtgctcagaattcagtggccttaggcaagccgtgtctcaaggtttaccggccgagctgaaacctggaactaaccaattcttaactacagatgatggtgtctcagcaccaattctacctggtttccacccaaccccagagatgcatatcccaggcgaagtgaagaacctcttagaaatttgccaggtagagtctattctcgaggttaacaa----------ccttaccactaataaagcagctgaccagctcatgacgcgcttgttgataccagtgcaagcgcaaactg------cagtggacacactttgcgcggctttcaaagttgatcctggtcgtgatgggccttggcaatcaacattagtgggccagatatgcagatattacacccaatggtcaggttccctagaggtgacatttatgttcactggcagtttcatggcaacaggaaaaatgcttattgcctacaccccaccaggtgcgccacagcctgccaacagaagaactgcaatgttaggaacgcatgtgatttgggactttggcctacaatcatctgttaccttggtgatcccctggattagcaacacacattacagagccatgggtagcaatgmctattttgactactactctgcaggtattgtaacaatctggtaccagaccaactttgtggtgccatcaggagctccaacatcagcttacatcattgccctcgctgctgctcagaaaaacttcacattaaggttgcccaaagacactggtgacatttcacaaactgcaatcctgcaaggtgacccc--------attgaagaggctatca---acaacacagt--------------------------cgctggaacactaaatcgagc---attaggaggtgcaactcac--------acaacagcccaaaacacacagcagagtagtcatcagattggaacaggagaagtccccgccttgcaagcagcagagactggagctacatctaatacctcagacgagaacatgttggaaactcgttgtgtggttaactcccatagtgtggctgagactagtatctcgcatttcttttccagagccggactagttggcatgcttgacctgctaacatcagaaaagac----taacatagggtttacaacctgggacattgacatcatgggatttgttcaacagcgtaggaagctggaaatgttcacatacatgagatttgatgcagagtttaccttcttaaccgtgggagcgactggtgctgcaccagccactgttatccaatacatgtatgtnccaccgggtgcacccaagcccacccagcgtgattccttcgaatggcagactgcaaccaatccttccatctttgtcaagattagtgatcccccagcccaggtctcggtaccttttatgtcacctgcagcagcatatcaatggttttatgatggataccctacatttggcaatcacccaaccaatcaagacttcagatatggaatctgtcccaacaatctcatggggactttctgcgtgcgggttcttggttcagagaaacttaccgaagctctcagagtgcgtatctacatgcgcatcaagcacgtcagagcatgggtccctagaccactcaggtcacagagatatcttctgaagaattatccaaactttgatggggc----taatattacgcccactagtgcatctagatctggcat---cacaac---------------------------------------agctggt------------------------------------------gcgtttggacaacagtcaggggcagtctatgttgggaattataaaatagttaacagacatctggcaactcaagaagactggagcaatttagtctgggaaaactacaacagggatctcttggtgaccagtgtaaatgcacaaggtcgtgacaccatagcacgttgctcatgcaatacgggtgtttacttctgcaagtccatgaacaaacattaccccgtcagtttccaaggacctggaattgttgaggtccaagccaatgaattctatccacacagataccaaacccacgttctacttgggtatggtatgtcaataccaggggactgtggtggcatccttaggtgccagcacggtgtcattggcctagtgaccatgggaggcgacggcctggttggttttgcagacctcagggacttgttctggctcgatgatgaagcgatggagcagggggtcacagattacatcaag-ggacttggcgatgcctttggtacagggttcactgactccatttctagggagatccagcaactgaagaactatctcctaggttcagagaatgtggtagagaagatccttaaagcattaatcaaagtagtttcagcactagtgatagttgttaggagtgattatgacctggtcactttgaccgcgacccttgctttgactgggtgccatggaagcccttgggcctggctcaaatccaaggtttccaatctgcttgacatccccattgcacaaaaacaaagtgattcatggctcaagaaatttacagaaatggctaatgctgccagaggccttgaatggattgcaaacaaaattagtaagtttatagactgggtgaaagagaagatcgtcccagcagctaaagaaaaagtggagttcctctccaacctcaagcaattgccc-ttattagagtcccagattgccaacattgaacaatcagcagctagccaggaggacctagaaaatctattcagtaatgttgcctacttagccca---------ttattgcagaaagttccagccactctacgcctcagaggcaaagaggatctatgccatggagaaaagaattaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgcttaataattagaggaccccctggcactggcaaatcactagcaacaggcatcatcggtagagctattgcagaaaagtaccattctagtgtgtattccctacctccagatccggaccattttgatggctacaaacaacaagtggtcacagtgatggatgacctttgccaaaatccaaatgggaaagatatgtcgctcttttgccagatggtttctacagtggaatttattccacccatggctagtttagaggaaaaaggcgtttcatttacttcaaaatttgtgattgcctccactaattcatctaacattatagtcccaactgtttcagacagtgatgccattagaagaaggttctatatggattgtgacattgaggttcctgagtcatttagaacaccccagggaagattagatgccgctagagctgccaagctttgttcagaaaacaacactgctaatttcaaaaagtgtagtcctctggtttgtggtaaagccatccaactcagggataggaaatcaggggtcagatatggtttggattctgttgtttcggaattaatcagggaatacaacaaccgctcggcagttggcaacaccattgaggcacttttccaaggcccaccccagtttaaaccaattaggata---accct---tgacaaaccagcgccagacgcaattagtgatcttctggcaagtgtggatagtgaagaggtcaggcaatattgc-agggaccaggggtggattattccagagaaacccaccaacattgagaggcatgtgaacagggctctaatgattctacaatcagtcactactgtagtcgcagtgatttcacttgtgtatgtcatctataagctctttgctggattgcaaggcgcctattcagggatgcccaaaacagcggtcaagaaaccggtgctgagaaccgctgtggcccagggacctggtttagactttgctctctctctactgaagaagaacatcagaaaatgccaaacagaccaggggcactttaccttgttgggtatcagagatagactggctgtgctcccgagacatgcttcaccaggagattcaatctggattgagcacaaacagattaagattctggatgctgttgaattggtggacgaacaacaggtcaaccttgaactcacattgatcacccttgatactaatgaaaaattcagggacattacaaaatttatcccagagcaaattgaaggaactgctgacgccactctcgtcatcaacactgaagccatgccatcaatgtttgtcccagttggtgatgttcaacagtacggtttcctcaatctcagtggtaaaccaacacatagaactatgatgtacaatttcccaaccagagcaggacagtgtggaggagtggttacctcagtaggaaagattgtaggcatccacatagggggcaacggccgccaaggcttctgtgctgcactcaaacgcagctatttcgcctctgagcaaggtgaaatccaatggatgaggcccaataaggagacaggtaatttcaacattaacggcccaaccaagaccaaacttgaacctagtgttttccatgatgtttttgaaggagtcaaagaaccagcagtcctccactctaaggataagagacttgaggttgactttgaaactgccctcttctccaaatacatagggaacaagatccatgaaccagatgagtacatgattcaggctgcaaaccattatgcagaccagctcaaacaattagacattgacacatcaaaaatgagcatggaggatgcttgctatggaacagaattcctagaaggaattgatttggcaacgagtgcagggtacccctataatgcattgggcattaagaagagggacatcttgaacccccaaactagggatgtgaccaaaatgaaaatgtacttggataaatacggcattgacctcccctactctacttatgtcaaggatgagcttagagcaaaagataagatcaagaaaggaaaatctagactaattgaagccagtagtatcaatgactcggtttaccttaggatgtgcttcggccacttgtatgagaaattccatgcaaatccggggacaatcactggatcagcagttggttgtaacccagacactttctggagcaaaatccctataatgctccctggttctctctttgcttttgattatactgggtatgatgctagtctttctcctgcttggtttagggctttggaaattgttcttaaaagattaggttatgatcaagatgctatttctttaattgagggaatcaatcactcccaccacatttacagaaatcaaacgtactgtgtaatgggtgggatgccatctggatgctctggtactagcatttttaattccatgattaataatataataatcagaactctcttaatcaagacttttaaagggattgatctagatgagttaaatatgattgcatatggagatgatgtccttgctagctaccccttccctatcgactgtgctgaacttgcaaagacaggattggaatatggcttagttatgacaccagctgataagtccacttgctttaatgaagtaaactgggagaatgcaacatttctcaagagaggatttaaaccagatgaacaatatccattcctcatccacccaaccatgccaatgaaggagatacacgagtctattcgttggactaaggacccacgtaacacacaagaccacgtgcggtcactttgtctcctagcatggcataatggtaggaaaacctatgaggaatttgttgacaaaattagaactgtgccaattggcaaagttttagctcttccaaattatgataacttgagaagaaattggcttgaactgtttt---a-aatgacaaattg--------------------------aa---------------ttgatgtt-aattggcaaaacctttggtgtaccct-g-ggcttgacaaa---gtca--------ccaaaggt-taattac-cc-taaccca-g-tagggt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY773285.1_Human_enterovirus_90_isolate_F950027_complete_genome
-----------------tttaaaa--cag-ctc-tagggttg-t-tcccaccctag-aggcccaagt-ggcggctagcactctggtattacggtacctttgtgcgcct-g-ttttata------tccc---t---tccc-cc-------at-gtaacttagaagatattaaacaaa---------------gttcaa-taggagggggtacaaaccagtgccaccacga-acaaacacttctg-tttccccgg--tgaagctacatagactgt-tcccacggttgaaagtggcag-atccgttatccgctttggtacttcgagaaacc-tagtaccaccttggaatcttcgatgcgttgcgctcagcactcaa-cccca-gagtgtagcttaggtcgatgagtctggacg-atcctcactggcgacagtggtccaggctgcgttggcggcctacctgt--------ggcgaaa-gccacaggacgc-tagttgtgaacaaggtgtg-aagagtctattgagctaccaaagagtcctccggcccctgaatgcggctaatcccaaccacggagcaagtgcccacaaacca-gtggg-tggcttgtcgtaatgcgtaagtctgtggcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttatcatggctgcttatggtgacaatc-ta-------agattgttatcatatagctattggattggccatccgg--tgactaacagagatcttgca-----tacctg----tttgtt-ggttttactaaac-----tagatat--------------agttacatttaaa-actcttctttatatcatacagttgaatagtagaaaga-gaaaatgggagctcaagtttcaacccaaaagactggatctcatgagaaccagaacatagctgcta-gcggctccactataaattacacaaccatcaactactacaaggattcctatgccgcttcagccgcaaagcaggatttctcccaagacccctccaaattcactcaacctgttgtggatgctctcaaagaaacggctccaccactcaaatcaccatcagctgaagcatgtggctatagtgatagggttgcccagctaacactgggtaattccactatcacaactcaggaggctgccaacatcacagtcggatatggtgagtggcccgaatattccaaggatactgaggccactgcagtggacaagcctactagaccagatgtgtcagtcaataggttctacacactcccggcaaaattatgg---------gccaaca---------actctaaaggatggtattggaagtttccagatgttctctgcgagctgggagtgtttggtcaaaacgcacagtaccattacttgtataggtccgggttctgcatacatgtccaatgtaatgctagtaagtttcatcaaggcacactcttggtggctgctataccagaattaatgcttgccagatcgagtaatgacactaacccagcca---ctgccccccacccaccatataatgcaacacaacctggggaggcaggcaaggaatttgcttacccctacattcttgactccggcatcccactgtctcaagctctgatcttccctcatcagtggatcaacttgcgcactaacaactgtgctaccatagttatgccctatatcaactgcttgccctttgactcagccctgaaccactgcaacttttccttggtggtcataccagttgcaccactcgcttacaatgaaggagccactacagctatacccattactgtaactgttgccccaatgtgctcggaattcagtggtcttaggcaagctgtggttcaaggactaccggcagaattaaaacctgggactaatcaatttttaactacagatgatggtgtctcagcaccaattttacctggtttccacccaaccccagagatgcacatcccaggtgaagtgaagaacctcttagaaatttgccaagtggagtctattctcgaggtcaacaa----------ccttaccaccaataaagcagctagccaactcatgacacgcctgttgataccagtggaagcgcaaactg------cagtggatgcactctgtgcagctttcaaagttgatcctgggcgcgatgggccttggcaatctacattagtgggtcagatatgcagatactacacccaatggtcaggatccctcgaagtgacattcatgttcactggtagttttatggcaacggggaaaatgctcattgcctacaccccaccaggtgcgccgcaacccgctaacagaagaattgcaatgttagggacacatgtaatctgggattttggtttacaatcatctgtcaccttggtcatcccctggatcagcaacacgcattacagagccatgggtagtaatgattattttgactactactctgcaggtattgtaacaatttggtatcagaccaactttgtggtgccatcaggagccccaacatcagcttacattatcgcccttgctgctgctcagaagaactttacattgaggttgcccaaggacactggcgatatctcacaaaccgccatcctgcaaggtgaccct--------attgaagaggccatca---acaacacagt--------------------------cgctggaacactgaatcgagc---actgggaagtgcatcacac--------accacagcccaaaacacacagcaaagtagccatcagattggaacaggagaagtccccgccctgcaagcagcagagactggggctacatccaacacttcagatgagaacatgttggaaacccgttgtgtgatcaactcccatagtgtggctgagactagtatctcgcatttcttctccagagctgggttagttggtatgcttgacctgctaacgtcaggggatac----tgatatagggttcacatcctgggacattgacatcatgggatttgttcaacagcgtaggaaactggagatgttcacatacatgaggtttgatgcagagttcactttcttaactgtgggagcgactggtgctgcgccagccactgttatccaatatatgtatgtaccaccaggtgcacccaaacccacccaacgtgattcctttgaatggcagacttcaactaatccttccatctttgtcaaggttagtgatcccccagcccaggtctcggtacccttcatgtcacctgcagcagcatatcaatggttttatgatggataccctacatttggcaatcacccaaccaatcaagacttcagatacggaatctgtcccaataatctcatggggactttctgcgtgcgagttcttggttcagagaagctcaccgaggccctcagagtgcgcatctacatgcgcatcaagcacgtcagagcatggattcctagaccacttaggtcgcagaaatatcttctgaagaattatccaaacttcgatggggc----tgatgtcacacctactagtgcatctagagccaatat---cacaac---------------------------------------agctggc------------------------------------------gtgtttggtcaacagtcaggggcagtctatgttgggaattataaaatagttaacagacatctggcaactgaagcagactggaatagtttagtctgggaaagctacaacagggacctcttagtgaccagtgtgaatgcacaaggttgcgataccatagcacgttgctcgtgcaaggcaggtgtttatttctgcaagtccatgaacaagcattatcctgtcagtttccaaggacctggaattgtcgaggtccaagccaatgaattctatccacacagataccaaacccacgttctactcgggcatggtacatcgataccaggggactgtggtggtatcctcagatgccaacacggtgtcattggcctagtgaccatgggaggtgatggcttggttggttttgcagacctcagagacctgttttggctcgacgatgaagcgatggaacagggggtcacggattacatcaag-ggacttggtgatgcttttggtacagggttcactgattccatctctagggagatccagcaacttaaaaactacctcctaggttcagaaaatgtggtagagaagatccttaaagcactaatcaaagtagtttcagcattggtgatagttgttaggagtgactatgacctggtcaccctgaccgcaaccctcgctttaattgggtgtcacggaagtccctgggcctggctcaaatccaaagtttccaatctacttgacattcctattgcacaaaagcagagtgactcatggctcaagaaattcacagaaatggctaatgctgctagaggtcttgaatggattgcaaataaaattagcaagtttatagactgggtgaaagagaagattgtcccagcagctaaagaaaaggtggagttcctctccaatctcaagcaattgccc-ttattagagtcccagatcgccaacattgaacagtcagcagctagtcaggaagatttagaaaatctattcagtaatgttgcctacctagccca---------ttattgcagaaagttccagccactctacgcctcagaggcgaagaggatctacgccatggagaaaagaatcaataattacatgcagttcaagagcaaacaccgaattgaacccgtatgtttaataattagaggaccccctggcaccggaaagtcactggcaacaggcattattggtagagctattgcagagaaataccactccagtgtatattccttgcccccagacccagatcactttgatggttacaagcaacaagtggttacagtgatggatgacctttgccaaaacccagacgggaaagacatgtcactcttttgccagatggtttctacagtagagtttataccacccatggctagcctagaggaaaagggtgtctcattcacctcaaaatttgtgattgcttccaccaactcatctaacatcatagtcccgactgtctcagacagtgacgccattagaagaaggttctacatggattgtgacatcgaggttcctgaatcgtttaggacaccccagggaaggctagatgctgctagagctgccaaactttgttcagagaacaacactgctaacttcaaaaagtgcagtcctctggtttgtggcaaagccattcaacttagggataggaaatcaggagtcaggtacggtttggattctgtcgtctcagagctaatcagagagtacaacaaccgctcggcagttggtaacactattgaggcactctttcaaggtccaccccaatttaaaccaattagaata---accct---tgacaaaccagcgccagatgcaattagtgatcttttagcaagtgtggatagtgaggaggttagacaatattgt-aggcaccaggggtggattattccagagaagcctaccaacattgaaagacacgtaaatagggctctgatgattctacaatcagttaccactgtggttgcagtgatttcacttgtgtatgtcatctacaaactctttgccggtttccaaggtgcctactcggggatgcccaagacagcggtcaagaaaccagtactgagaactgctgtagctcagggacctgggctagactttgctctctctctactgaagaagaacatcagaaaatgccagacagaccaggggcacttcaccttgttaggaattagggatagattagctgtgctcccaagacatgcttcaccaggagactcaatttggattgaacacaagcaaattaaaattctggacgccgttgagctggtcgatgaacaacaagtcaatcttgagcttacactgatcaccctcgacaccaatgaaaagttcagagacattacaaagtttattcctgagcaaattgaagggactgcagatgccacccttgtcatcaacacagaggctatgccatcaatgtttgttccagtcggtgatgtccagcaatatggctttcttaacctcagtggcaaaccaacacacagaaccatgatgtataacttcccaaccaaagcaggacagtgtggaggagtggtcacctcagtgggaagaattgtgggcatccacattggaggcaatggccgccagggcttctgcgctgcactcaaacgcagttattttgcttctgaacaaggtgagattcaatggatgaaatccaataaagagacaggcaatttcaatatcaatggtcccactaaaactaaacttgaacccagtgttttccacgatgtgtttgaaggagtcaaagaaccagcagtccttcactccaaagacaagagacttgaggttgattttgagactgctcttttctccaaatacatagggaacaagatgcatgagccagatgagtacatgatccaggccgcgaaccattatgcagaccagcttaaacaattggacatcgatacatcaaaaatgagcatggaggatgcctgttatggaacagaattcctagaaggaattgatttggcaacaagtgcggggtacccctacaacgcattaggcataaagaaaaaggacattctgaacccccaaaccagggatgtgactaaaatgaagatgtacttggacaaatatggtattgacctcccttactccacttatgtcaaagatgaacttagagctaaggataaaatcaagaaagggaaatctagactgattgaggccagtagcattaatgactcagtctaccttagaatgtgctttggccacttgtatgagaaattccatgcaaatccagggacgatcactggctcggcagttggttgtaacccagacactttctggagtaaaatccctataatgcttcctggttccctctttgcctttgattatactgggtatgatgctagtctttctcctgcttggtttagggctttagaaatcgttcttaaaagattaggttatgatcaagatgctatctcactaattgagggaatcaatcactcccatcacatttacagaaaccaaacgtactgtgtaatgggtgggatgccatctgggtgttctggtactagcattttcaattctatgattaacaacattattatcaggactcttctaatcagaacctttaaaggaattgatttggatgaattaaatatgattgcatatggagatgatgttcttgctagttaccctttccctattgattgtgctgaacttgcaaaaacaggattggaatatggtttagtcatgacaccggctgacaaatctacttgtttcaatgaggtaaattgggaaaatgcaacgttcctcaagaggggattcaaaccagatgagcaatatccgttcctcatccacccaaccatgccgatgaaggaaatacacgagtccattcgttggactaaagacccacgtaacacacaagatcacgtgcggtcactgtgcctcctagcatggcataatggtagggaaacctatgaggaatttgttgacaaaattagaactgtaccaattggcaaagtcttagctcttccaaattatgataacttgagaagaaattggcttgaactgtttt---a-aataatgatcta--------------------------aa---------------atagtttc-aattggcaacatctttggtgccccct-g-ggcttgacaaa---gtca--------ccaaagct-caattcc-cc-caaccca-g-tggggtaaaaaa-----------------------------------------------------------------------------aaaaaaaa-------------------------------------------------------------------------------------------------------------------------------------
>AB192877.1_Human_enterovirus_90_genomic_RNA_complete_genome
-----------------tttaaaa--cag-ctc-tagggttg-t-tcccgccctag-aggcccacgt-ggcggctagcactctggtatcacggtacctttgtgcgcct-g-ttttata-----ccccc---t---cccc-cc-------at-gtaacttagaagctattaaacaaa---------------gttcaa-tagaagggggtacaaaccagtaccaccacga-acaagcacttctg-tttccccgg--tgaagctacatggactgt-tcccacggttgaaagtggcag-atccgttatccgctttggtacttcgagaaacc-tagtatcatcttggaatcttcgacgcgttgcgctcagcactcaa-cccca-gagtgtagcttaggtcgatgagtctggacg-atccccactggcgacagtggtccaggctgcgttggcggcctacctgt--------ggcgaaa-gccacaggacgc-tagttgtgaacaaggtgtg-aagagtctattgagctaccaaagagtcctccggcccctgaatgcggctaatcccaaccacggagcaagtgctcacaaacca-gtgag-tggcttgtcgtaacgcgcaagtctgtggcggaaccgactactttgggtgtccgtgtttcc--tttt---atttttatcatggctgcttatggtgacaatc-ta-------agattgttatcatatagctattggattggccatccgg--tgactaacagagatatcata-----tatcta----tttgtt-ggttttgttaagc-----tagacac--------------aactgcattcaat-tctcttctcttcatcacacaattgaataatagaaaga-gaaaatgggagctcaagtctcaacccagaaaactggatctcacgagaaccagaacatagctgcga-gtgggtctactattaattatacaaccattaattattataaggattcctatgccgcttcagccgcaaaacaggatttctcccaagatccctctaagttcacccaacctgttgtagatgctctcaaagaaacagctccaccacttaaatcaccatcagctgaagcatgtggttatagtgatagggtcgcacagctaacactaggcaattctaccatcacaactcaggaggccgccaatatcacagttggatatggcgaatggcccgaatattccaaggacaccgaggctactgcagtggacaagcctactagaccagatgtatcagtcaacaggttctacacactcccagcaaaattatgg---------gctaaca---------attctaaaggatggtattggaaattcccagatgttctctgtgaactgggggtgtttggtcaaaatgcacagtaccattatttgtacagatctggattctgtatccacgttcagtgtaatgctagtaagtttcatcagggtacactcttagtggctgctataccagaattaatgcttgctaggtcaagtgctgaaactaatccagcta---ctgccccccatccaccatatagtgcaacacaacctggagaggcaggtaaggagtttgcttttccttatgttcttgattctggtattccactgtctcaagctctgatcttcccacatcaatggatcaacttgcgcaccaacaactgtgctaccatagttatgccctatgttaattgcttgccctttgactcagccctgaatcactgcaacttttctttggtggtcataccaattgcaccactcgcttataatgatggagcaactactgctattccaatcactatcacagtagcaccgatgtgttcagagttttctgggctcagacaggctgtcacacaaggactaccagcggagctaaaaccaggcactaaccaattcttgactacagatgatggagtctctgcacccatactcccaggtttccaccctacaccagaaatgcacataccgggtgaagttaaaaacttgttagaaatctgccaagttgagtctatactagaggttaacaa----------ccttaatacccaggccactgctgctcagttgatggagcgtctacttatcccagtccaagcccaaacag------cggtagacacactatgtgctgctttcaaggtggaccccgggcgtgatggtccgtggcaatcaacactggttggtcaaatctgtagatactacacccaatggtcagggtcattagaggtgacattcatgttcactgggagttttatggctactggaaagatgctcattgcatacacaccaccaggagccccacaaccagccaacagaagaactgctatgcttggtacacatgtcatatgggactttgggctacagtcttcagttacattggtcataccttggattagtaatacacattatagagccatggggacaaatgattactttgactactattcagcaggtattgtgacaatctggtaccagacaaattttgtggtaccgtctggagctcccacttcagcatacataatagctttggcagctgcccagaagaatttcactctaagactaccaaaggacaccggggacatctcacaaacagccatcctgcaaggggaccca--------atagaagacaccatca---actccgctgt--------------------------ttctaacacactgaaccgcgc---attgggtggagcaagccac--------acaacagcgcaaaacacacaagctagcacacaccaaattggaacaggggaagtcccagcactacaagctgctgaaactggtgccacctccaatacttcagatgaaaacatgctcgagacacgctgtgttgtcaactcacacagtgtcgctgaaacatcaatctcccacttcttttcaagagctggattagttggaatgttagatctgctcacctcagataagac----caccatgggctttactacttgggacatagatatcatgggctttgtacaacaacgtagaaagctagagatgttcacatatatgaggtttgacgcagagttcaccttcctgacagtgggtgccaatggtactgctccagctacagtgattcaatatatgtttgtcccacctggtgctccaaaacccactcagagagactcatttgaatggcagacagccacaaatccatcaatatttgtgaagatatcagaccctccagcacaagtatctgttcctttcatgtctcctgctgctgcctatcaatggttctatgatggctaccccaccttcggtaatcacccaaccaatcaagatttcaggtacggcatttgccccaataatctcatgggaacgttctgcgtgagggttctgggatcagagaagctcactgaagctctcagagtgcgcatatacatgcgcatcaaacatgtcaaggcctgggtgcccagaccactgaggtcgcagaaatacatgttaaagaattacccgaactttgacggggc----aaatattaccccaacaactgcaaatagagcacagat---tacaac---------------------------------------agctggt------------------------------------------gcatttggtcaacagtctggagcagtgtatgtgggcaactacaggatagttaatagacaccttgccactcagagagactgggacaatctagtctgggaatcttatgaaagagacctcttagtttccaccactacagcccagggatgtgatacaattgctagatgtaagtgtaggcatggagtgtactactgtaactcaatgaggaagcattacccagtaagttttggtgaaccagcttttatctatgtagatgaaaatgagttttaccctgctagataccaatcacatgtaatatcttcagccggcatcgcagtgccgggtgattgtggcggtattcttaggtgtgagcatggtgtgattggccttgtcaccatgggtggacctaacatcgtaggtttcgctgacatcagagatctcttttggttggatgatgaagttatggagcaaggtgtgactgactacattaag-ggacttggtgatgcctttggcacaggatttactgactccatctctagggaaattcagcaactgaagaactacctcctaggttcagagaatgtagtagagaagatccttaaagcattaatcaaagtagtctcagcactagtgatagttgttaggagtgattatgacctggttactttgactgcaacccttgctttgattgggtgccacggaagcccctgggcctggctcaaatccaaggtctccaatctgcttgatattcccattgcacaaaaacagagtgattcatggctcaagaaattcacggaaatggctaatgctgccagaggcctcgaatggattgcaaacaaaattagtaagtttatagactgggtgaaagagaagatcgtcccagcagctaaagaaaaagtggagttcctatccaacctcaagcaattgccc-ttactagagtctcagattgccaacattgaacaatcagcagctagccaggaagacctagaaaatctattcagtaatgttgcctacttagccca---------ttattgcagaaagttccagccactctatgcctcagaggcaaagaggatctatgccatggagaaaagaattaataactacatgcagttcaagagcaaacaccgaattgaacctgtatgtttaataattagaggaccccctggcactggtaaatcattagcaacaggcatcattggtagagctattgcggaaaagtaccattctagtgtatattccctacctccagacccagaccattttgatggctacaagcaacaagtagttacagtaatggatgacctttgccaaaacccagatgggaaagatatgtcactcttttgccagatggtttctacagtggaatttattccacccatggctagtttagaagaaaaaggagtttcatttacttcaaaatttgtgattgcctccaccaattcatccaacattatagtcccaactgtctcagatagtgatgccattagaagaaggttctacatggattgtgacattgaagttcctgagtcatttagaacaccccaagggagattagatgctgctagggctgccaagctttgttcagaaaacaacaccgctaatttcaaaaagtgtagtcctctcgtttgtggtaaagccattcaacttagggacaggaaatcaggggtcagatatggtttggattctgttgtttcagaattaattagagaatacaacaaccgctcggcggttggcaacaccattgaggcacttttccaaggcccacctcagtttaaaccaattaggata---accct---tgacaaaccagcgccagatgcaattagtgatcttctggcaagtgtggatagtgaggaggtcaggcaatattgt-agagatcaggggtggattattccagagaaacccactaacattgagagacatgtgaacagggctctaatgattctacaatcagtcactaccgtagtcgccgtgatttcacttgtgtatgtcatctataaactctttgctggattccaaggtgcctactcgggaatgcccaaaacagcagtcaagaaaccggtgctgagaaccgctgtggcccaagggcctggtttagactttgctctctctctactgaagaagaacatcagaaaatgccaaacagatcagggacactttactttgttgggtatcagagatagactggcagtgctccctagacatgctttaccaggagattcaatttggattgagcacaaacagattaagattctggatgctgtcgagttggtggacgaacaacaggtcaatcttgaactcacattgatcacccttgacaccaatgaaaaattcagggacatcacgaaatttatcccagagcaaatcgaaggcactgctgatgctacccttgtcatcaacactgaagccatgccatcaatgtttgtcccagttggtgacgttcaacagtacggctttctcaacctcagtggtaaaccaacacacagaactatgatgtacaatttcccgaccaaagcaggacagtgtggaggagtagtcacttcagtaggaaaaattgtaggcatccacatagggggcaacggccgtcaaggcttctgtgctgcactcaaacgcagttactttgcctctgagcaaggcgagatccagtggatgagacctaataaagagacaggtaattttaacatcaacggcccaactaagaccaaacttgaacctagtgttttctatgatgtttttgaaggagtcaaagaaccagcagtcctccattctaaggacaagagacttgaggttgattttgagactgccctcttttccaaatacatagggaacaagatccatgagccagatgagtacatgattcaggctgcaaaccattatgcagaccaactcaaacaattggacattgatacatcaaaaatgagcatggaggatgcttgctatggaacagaattcctagagggaattgatttggcaacgagtgcagggtatccctacaatgcactaggcattaagaagagggacattctgaacccccaaactagggatgtgaccaaaatgaaaatgtacttggataaatacggcattgaccttccctactctacttatgtcaaagatgagcttagagcaaaagataagatcaagaaaggaaagtccaggttaattgaagccagtagtatcaatgactcagtttaccttagaatgtgctttggtcacttgtatgagaaattccatgcaaatccgggaacaatcactggatccgcagttggttgtaacccagacactttctggagtaaaatccctataatgctccctggttctctctttgcttttgattacactgggtatgatgctagtctttctcctgcttggttcagggctttagaaattgtccttaaaagattaggttatgatcaagatgctatttctttgattgagggaattaatcactcccatcacatttacagaaatcagacatattgtgtgatgggcgggatgccatctggatgctctggtactagcatttttaattccatgattaataatataataatcagaactcttttaatcaagacttttaaaggaattgatctggatgaattaaatatgattgcatacggagatgatgtccttgctagctaccccttccctattgactgtgctgaacttgcaaagacaggattagaatatggcttagttatgacaccagctgataagtctgcttgcttcaatgaggtgacctgggagaatgcaacatttctcaagagaggatttaaaccagatgaacaatatccattccttatccacccaaccatgccaatgaaggaagtgcacgagtccattcgttggactaaggacccacgtaacacacaagaccacgtgcggtcactgtgcctcctagcatggcacaatggtagggaaacctatgaggaatttgttgacaaaattagaactgtaccaattggcaaagttttagctcttccaaattatgataacttgagaaggaattggcttgaactgtttt---a-aattacaatttg--------------------------aa---------------ttaatgtt-aattggcaaaacctttggtgtaccct-g-ggcttgacaaa---gtca--------ccaaaggt-taattac-cc-taaccca-g-tggggt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AY697461.1_Human_enterovirus_91_polyprotein_gene_complete_cds
-------------------ttaaa--cag-ctc-tagggttg-t-tcccaccctag-aggcccacgt-ggcggctagcactctggtatcacggtacctttgtgcgcct-g-ttttata------tccc---t---ttcc-cc-------at-gtaacttagaagttattaaacaaa---------------gttcaa-tagaagggggtacaaaccagtgccaccacga-acaagcacttctg-tttccccgg--tgaagctgtatagactgt-ctccacggttgaaaatggcag-atccgttacccgctttggtacttcgagaaacc-tagtatcaccttggaatcttcgatgcgttgcgctcagcactcaa-cccca-gagtgtagcttaggtcgatgagtctggacg-atcctcactggtgacagtggtccaggctgcgttggcggcctacctgt--------ggtgaaa-accacaggacgc-tagttgtgaacaaggtgtg-aagagtctattgagctaccaaagagtcctccggcccctgaatgcggctaatcctaaccacggagcaagtgccttcaaacca-gtagg-tagcttgtcgtaacgcgcaagtctgtggcggaaccgactactttgggtgtccgtgtttcc--tttt---a-ttttatcatggctgcttatggtgacaatc-ta-------agattgttatcatatagctattggattggccatccgg--tgactaacagagatctcata-----tacctt----tttgtt-ggttttactaaat-----taaatat--------------taccacgttcaag-acacttctccttatcatacaactaaatagtgagaaga-gaaaatgggagctcaagtctcaactcagaaaactggatcgcatgagaatcaaaacatcgctgcaa-gtggatccactataaactataccaccattaattactacaaggattcatatgctgcatctgcagccaagcaggatttctcgcaagacccctccaaattcactcaacctgtagtagatgccctaaaagagacggcaccaccactgaaatcaccatcggcagaagcatgtgggtatagtgacagagtggctcagttaaccgtgggcaactccactattaccacccaagaagcggccaacatcactgtcggatggggtgagtggccagagtattgcccagatactgatgctactgctgtagacaaacccacaaggcccgatgtctccgtcaataggttttacacacttagtgctaagctgtgggaaaagactggcgaga---------attccaaggggtggtactggaaattcccagatgtgttgacagaaacgggagtcttcggacaaaatgcccaatatcactatttgtatagatctggattctgtgtgcatgttcagtgcaacgctagtaaattccatcaaggaacactactggttgtagtgatcccggagtttgttaattctagatcctctaatagtactgaccctacca---cagctccacacccaccatactatgcaactcaaccaggacctggaggtaagacctttgcatacccctatgtgttggatgcaggcgtaccactctcccaagcattaatctggccgcatcaatggattaacctcaggactaacaattgtgccaccatagttatcccctatgctaacaccgtgccctttgactcggctctgaatcattgcaattttggtctcgccatcatcccaatagcaccattggactttaatgagggagcaacgacagctataccaataacagttaccatagctcccttgtgctctgaatttgcaggtctgaggcaggctgtacagcaaggtttgcctacagaatcaaagcctggcacaaaccagttcctgaccacagacgacggagttgcagcacccatactaccagggtatcaccccacacaagagatacacataccaggtgaggttaaaaacctcttggagatttgtagagtggagagtatccttgaagtcaacaa----------cttaacaaccaatgaagcta------acccaatggaaaggctgttaatccctgtttcagtacagagcg------ctgtagattctctctgcgcggcatttagagtagatcctggaagagatggcccctggcaatccacgttgttagggcagctctgcagatattacacacaatggtctggatcattagaaatcactttcatgttcactggttcatttatggcaacaggtaaaatgcttatagcatatacaccaccaggaggagcacaaccaactagccgctcccttgccatgctaggcacacatgttatttgggattttggccttcaatcttcagtcactttagttataccatggataagcaacacccactacagagctcatggggatggaggctattttgattattactccacaggcatagtcaccatttggtaccagaccaattacgtagtgcctattggagcacccacctcagcttacatcatagcattaggtgctgcccaacccaattttaccatgagattgtgcaaagactcaccagaaatatctcaaactgccatattgcaaggggactca--------attgaggacatgatta---attcagcagt--------------------------ttccactgcactcaacaatgctatttccagaccaccaacccag--------actacggctgagaacacaagacctagcacccaccagattggtactggtgaggtaccagcactacaagcagcagagacaggagcaacgtccacaaccagtgatgagaacatgattgagaccaggtgcgtggtaaataaacatagtgtagctgagaccactgtttcccacttctatggtaaagccggtttagtcggttggatacaactattgacttcaacaaaaaa----caaccacggtttcaaaaactgggatgtggatgtgatggggtttgtgcagttgcgcagaaaattagaactattcacttacatgagatttgatgctgagttcacctttgtggcatgtggtctgaacggcactgcacctaattcattgcttcagtacatgtatgttcctcctggagcacccaaacccaccactagagattcctttgaatggcaaaccgcctctaacccatcagtatttgtcaaaatgtcagatccccctgcacaagtgtctgtgcccttcatgtcaccagctagtgcttaccaatggttttatgacggttatccatcttttggaccacatcccacatctaaagacttccagtatggcatttgcccaaacaacttaatgggcactttctgtgtcagggttgtaggctccggtcagatcacagaccaagtggatgtgcgcatctatatgcggatcaagcacgtcaaggcatggttaccccgtccactcagatcccaaccctacatgctcaaaaattacccaaactttgatggaac----caaattgaagtgcacctccaaatctagaaccagtat---caaaac---------------------------------------agcaggg------------------------------------------gcctttggtcaacaatcaggtgcggtgtacgtgggtaattacagaattgtcaacagacaccttgctacccagaaagattgggacaacctggtgtgggagtcctatgagagagatcttctagtttccactacgacagcccagggatgtgacataattgctagatgcaagtgcagacatggagtgtattactgtaactcaatgaggaagcattacccagtgagctttggtgagccagcttttatttatgtggatgaaaatgaattttaccctgctaggtatcaatctcatgtaatatcttcagcaggtattgcagttccaggcgactgcggtggcatccttagatgcgagcatggtgtaattggtctggtcaccatgggcggcccgaacatcgtaggcttcgccgatgttagagatcttctctggttagatgatgaggttatggagcaaggtgtgactgattacattaag-ggccttggtgatgcctttggcacaggttttactgattccatttctagggaaatccagcagcttaaaaattacctcttaggttcagaaaatgtggtagagaaaattcttaaagcactgatcaaagtagtttcagcactagtgatagttgttaggagtgattatgacctagtcaccttgactgcaactcttgccttaattggttgccacgggagcccttgggcttggctcaaatccaaagtctccagcttacttgacattcccattgctcaaaagcaaagtgactcatggctcaagaaattcacagaaatggctaacgctgctagaggccttgaatggattgccaataaaatcagtaaattcatagattgggtgagagaaaggattgttccagcagctaaagagaaggtggaatttctctctaacctcaagcagctaccc-cttttagagtcccagattgccaacattgagcagtcagcagctagtcaggaggatttagaaaatttgttcagcaacgttgcctacctggccca---------ttactgtagaaagttccagccactctacgcttcagaagcaaagagaatatatgccatggagaaaagaatcaataattacatgcagttcaagagcaaacaccgaattgaacctgtatgtctaataattagaggaccccctggcactggcaaatcactggcaacaggtattattggaagagctattgcagaaaaatatcattctagtgtatactccttacctcctgacccagatcattttgacggttataagcaacaagtagtcacagtaatggatgatctttgccaaaacccagacgggaaagacatgtcactcttttgccagatggtatctacggtggaatttataccacccatggctagcttggaggagaaaggtgtctcattcacctcaaaattcgtgattgcctccaccaattcatccaacatcatagtcccgactgtctcagatagtgatgccatcaggagaagattctatatggattgtgatattgaggttcccgagtcatttaggacaccccagggaaggctagacgctgctcgagctgccaaactttgttcagaaaacaacactgctaacttcaaaaaatgtagccccctggtttgtggtaaagccattcaacttagggataggaaatcaggagttagatatggcctggattctgttgtctcagaactgatcagggaatacaacaaccgctcggcagttggtaacactattgaggcacttttccaaggcccaccccaatttaaaccagttaggata---accct---tgacaaaccagcaccagatgcaattagtgaccttctggcaagtgtggatagtgaagaggtcaggcaatattgt-agggatcagggttggattattccagagaagcctactaacatcgagagacatgtgaacagggctctaatgattctacaatcagttactactgtggttgcagtgatctcacttgtgtatgtcatctataaactctttgccgggttccaaggtgcctattcagggatgcccaaaacagcagttaagaaaccagtactaagaaccgctgtggcacaggggcctggattagactttgccctctctctattgaagaagaacatcagaaaatgccaaacagatcaaggacacttcaccttattaggaattagagatagactggctgtactcccaagacatgcttcaccaggagactcaatttggatagagcacaagcaggttaaaattctggatgctgttgaattggtagatgaacaacaagtcaatcttgaactcacattgatcacccttgacaccaatgaaaaattcagagacattacaaaattcatccctgagcaaattgaaggagctgttgacgccactcttgtcatcaatacagaagccatgccatcaatgtttgtcccagttggtgacgttcaacagtatggctttctcaatatcagtggtaagccaacacatagaactatgatgtacaacttcccaaccaaagcaggacagtgtggaggagtggttacctcagtaggaaagattgtaggcatccacatagggggcaacggccgccaaggcttctgtgctgcactcaaacgcagttactttgcctctgagcagggtgagatccaatggatgaaacctaataaggagacaggcaatttcaacatcaacggcccaaccaagaccaaacttgaacctagtgtcttccatgatgtcttcgaaggggtcaaagaaccagcagtcctccattctaaggacaagagacttgaagttgactttgaaactgccctcttctccaaatacatagggaacaagatctatgaaccagatgagtacatgattcaggctgcaaaccattatgcagaccagctcaaacaattggacattgacacatcaaagatgagcatggaggatgcttgttatggaacagaattcctagaagggattgatttggcaacgagtgcagggtacccctacaatgcattgggcattaagaagagggacattttgaacccccaaactagggatgtgaccaaaatgaaaatgtacttggataagtacggcattgacctcccctactctacttatgttaaggatgagcttagagcaaaagataagatcaagaaaggaaaatctagactaattgaagccagtagtattaatgactcagtttaccttagaatgtgctttggccacttgtatgagaaattccatgcaaatccggggacaatcactggatcagcagttggctgtaacccagayactttctggagtaaaatccctataatgcttcctggttctctctttgcttttgattacactgggtatgatgctagtctttctcctgcttggtttagggctttggagattgtcctcaaaagattaggttataatcaagatgctatttctttgattgagggaatcaatcactcccaccacatttacagaaatcaaacgtactgtgtgatgggtgggatgccatctggatgttctggcactagtatttttaattccatgattaataatataataatcagaactctcctaatcaagactttcaaaggaattgatttagatgaattaaatatgattgcatatggagatgatgtccttgctagctaccccttccctatcgactgtgctgaacttgcaaagataggattggaatatggtttagttatgacaccagctgataagtctgcttgctttaatgaagtgaattgggagaatgcaacatttctcaagagaggatttaaaccagatgaacaatatccattcctcatccacccaaccatgccaatgaaggagatacatgagtccattcgttggactaaggacccacgtaatacacaagaccacgtgcggtcactgtgtctcctagcatggcacaatggtagggaaacctatgaggaatttgttgataaaattagaactgtaccaattggcaaagttttagctcttccaaattatgataacttgagaagaaattggcttgaactgtttt---g-aatgacaatttg--------------------------aa---------------ttaatgtt-aattggcaaaacctttggtgtaccct-g-ggcttgacaaa---gtca--------ccaaaggt-taattac-cc-taaccca-g-tagggt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>EF667343.1_Simian_enterovirus_46_strain_RNM5_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccactcaca-gggcccac-g-tggcgttagtactctggtatcacggtacctttgtatgcct-g-ttttatc-----tccct---t---cccc----------c--gtaacgttagaagaataaacaaat---------------gacaac-tagcaaatccaccaacccaggtgggttttcg-tcaagcacttctg-tttccccggacttagtaccaataggctgt-acccacggctgaaggggaaaatgttcgttacccggctacctacttcgaaaagcc-tagtaccaccaatgattgtctcaagtgttacgttcagca--caa-cccc---agtgtagttcaggccgatgagtcaccgaa-ttccccacgggcgaccgtgtcggtggctgcgttggcggcctgcctgc--------gggtttcacccgcaggacgcttgattcatgacatggtgcg-aagagcctattgagctaggtagtagtcctccggcccctgaatgcggctaatcctaaccacggagcattcactggcaaacca-gccag-cagaatgtcgtaatgggtaactctgtggcggaaccgactactttgggtgtccgtgtttcc--tgtt---ttacttattttggctgcttatggtgacaatt-ta------cggattgttaccatatagctattggattggccatccggattat-----tgcaatactact----------a----tttgtg-ggatttctccctt-----tgtgtta--------------taataactacccc-attctaacattagctctcaagtttaatac----------actatgggtgcacaagtatcaactcagaagtcaggctcccacgagaacaccaactttgctgcag-gtggttccaccataaattacaccaccatcaactattataaagactcatatgcagcaagtgctaacaaacaagatttctctcaagatccatctaagtttactcaaccagtagtagatgctttgaaggagggcgcacctgtgctcaagtctccatcagctgaggcttgcggatacagcgacagagttgcacaactcacggtgggtaattcaaccatcaccacgcaggaagctgctaacatcactgttgggtatggtgtgtggcctgagtattcaaaggacacagaggcaactgccgttgacaaacccaccaggccagatgtgtctgttaacaggttttacacgttgtcagccaagctttggcagactg------------------actccaagggatggtactggaaattccctgacgtgcttaccgaaactggtgtctttggtcaaaatgctcagtaccactatttgtataggtcagggttttgcatacatgtgcagtgcaatgccagtaaattccaccagggcaccctcctagttgcagctataccagagtatgtggttgcgagagccagtaatgagcaagatcctaaca---cagcaccacaccccaattacaatgtcactcagccagggcctggtgggaaagaaatagctttcccctatttattagacaatggcactgccctttcccaggctttgatctaccctcatcaatggataaacctgcgcactaacaactgcgcaaccatagttatgccgtacattaattgtcttccctttgactcggctttgaatcattgcaactttggattagttgtaatccctgtagctccacttgcttacagcgcaggtgccaccacagccataccaatcacactctcaattgccccattgaattctgagtttgctggattgcgtcaagctatcactcaagggttgccaacagagctcaaaccagggacgaatcaattcttgacgacagatgatggagtatcagcacccatactaccagggttccatcctactccagagatgtttattccaggtgaggtgaaaaacttgttggaacttgctcaggtggagtctatattagaggtgaataa----------tctgacagaaaatgagtcgaacccc------atgcaaagattgttgattccagtgagtgtacaatcag------aagttgacaagctatgtgcatcattcagaacagacccagggagagatgggccttggcagtccacacttgtaggccaactgtgcagatattacactcaatggtcaggatcattagaggtcacctttatgtttactgggtcattcatggccacaggcgaactattgattgcctacacaccaccaggtgcttcacaacctacaactagaacacaagccatgttagggacccacatagtgtgggattttggtttgcagtcttctgccaccctagttattccttggattagtaacactcacttcaggggcactagcaccaatggtgtgtacaactactactcaagtggcatagtgacgatatggtaccagaccaactttgtagtccctgatggtgcaccaacaagcgcgtatatcattgcgctggctgctgctcaacccaatttcaccatgaggttatgcaaggatacagaccaaatctcccaagctgccattttccaagg---------ggacaaattaggagct--------------gccat--------------------------agaaaataaagtgcttaacaccatacaatctgctggcacacac--------accaccgcagccaacaccagtgaaagtacccacaccatagccaccggcaacactccagctctccaggctgctgagacgggtgcaacttccaccgctagtgatgagtcaatgatagagacgcgatgtgtcgtgaacaaacacagtgtagcggaaacatccataaccaacttctatgcccgtgctggattagtaggctacttaacactactcaccagtggttctac----ggctaatggattcaccaactgggacattgatattatggcctttgtacaacaacggcgcaagctggaaatcttcacctacatgcgctttgatgctgagtttacatttgtagcaaccagtgaggatggaagcactcctaacacaatgctgcagtacatgtatgtgcctccgggtgcccccaaaccaactggaagagaaacttttgagtggcaaacagccactaacccatccatctttgtgaagatgtcagatccaccagcacaagtgtcagtgccgttcgtgtcagcagctagtgcctaccaatggttctatgatggatacccaacatttggtaaccaccctgtaagtgacaacattaattacggtatttgcccaaacaatatgttgggcacttttgctctccgggtggttggttcaacaaacataaccagtcaaatcaaagtcagaatctttatgaggatgaaacatgtgagagcatgggtaccacgtccacttagaagtcaacagtatttaatcaggaactatcccaacttcccc---ac----cacagttagatgcttagcagtcagtagagcaaatat---cactac---------------------------------------cacaggt------------------------------------------gcttttggccaacaatctggagctatctatgtagggaattacagagtcgtgaacaggcatctggcaacccaacaagactgggacaatctcgtgtgggaggactacaaccgtgatctcttggttagtcaaaccacagcacacgggtgcgacaccattgcccggtgcgactgcacaactggagtttatttctgcaaatctatgatgaaacattacccagtttctttccaggggcccggtctagttcatgtcaagaaaaatgagtactacccagagagatatcaatcacatgtgctcttagctacaggacactctgaaccaggggattgcggtggtatccttagatgtcaacatggagttattggaattgtgaccatgggtggagacaatctggttggctttgctgacattcgtgatcttttctggttagatgatgaagtgatggaacagggggtcaccgattacatcaag-actcttggtgacgctttcggaaccggtttcactgagtccatctccagagaagttcagaacatcaaagacacacttgttggatcagaaggtgtggtcgagaagatcctaaagaatttggtcaaattgatctcagctctggtcataattgtgagaagtgagtatgatctggtcacagtcacagcaacacttgtactgattggttgtacaggtagtccatggaggtggctcaaaacaaaagtagcctccattctgggtatccctattgctcagaagcaatcagactcttggttgaagaagttcaatgatatggccaatgcagctcgtggtcttgaatggatagcaaacaaaattagtaaattcattgattggattagggaaaagatcatacctattgcaagagaaaaagctgaatttatcaacaaccttaaacagctcccc-ttgctagaaaaccaaatcaacaacctagaacaggctgctgctagtcaagaaagtcttgaacaattgtttggcaacatccaatatctagcaat---------caactgtagaaagttccaaccgctatatgcagctgaggcaaaaagggtcttctctatggagaagagaatggttaactacatgcagttcaagggcaaacaacgtattgaacctgtatgtttgatcattagaggctccccaggtacgggaaaatccttagcaactagcataattgccagagccattgctgagaagttcaactccagcgtgtactcattgccaccagacccagaccactttgatggatacaagcaacaagttgttacagtcatggatgatttgtgccaaaatcctgatggaaaggatatttcacttttctgccaaatggtttccactgtcgaattcatcccaccaatggcctcactggaagaaaagggcattgcattcaattcaaagtttgtcatcgcgtccacaaacgcgggcaacatcattgtaccaactgtatctgattctgaagccattagaaggagattttacatggattgtgacattgaggttccagatagttttagattggaaagtggtaaattagatgcaggcagggcagccaagttgtgctcagagaataacactgccaacttcaaaagatgcagtccattagtctgtggtaaagccatccagctgagagataggaaatcaaaagtgagatacagtttagattcagtaatctcagaactcattagagagtacaacaacagaatgtcagttggaaacaccattgaggcattgttccaaggtccaccaaagttcaagcctctcacaatc---tcact---agatacaccagctccagatgccattgcagaccttttgagaagtgtagataatgaagaggtcagggaatattgc-aaggaaaaaggatggataatccctgaggtaccaacaaaccttgaaagacactacaacagggctattgcattgattcaatccatcaccaccattttggctgtgatatctatggtgtatgttatctatagattatttgctggtttccagggtgcctactcaggcatgcctaagacagcagtaaagaaaccagttttaagaacagcagttgcacaaggtccaggattagactttgccatttccctgcttaaaaagaacatcagaaaagtacagacagaagaaggacatttcaccatgcttggtgtcagagacagacttgcagtgcttccaaggcatgcaaagccaggcaaaaccatttggatggaaggtaagcaggtgactgtacttgatgcagttgaattggttgatgaacaacaagtaaacctggaactcactttagttacattggacatgaacgagaaattcagagacatcaccaaattcattcctgaatcatttgagcattgcatggatgctactcttatcattaacacagaacagatgccatcaatgtttgtcccagtgggagatgttcaattttatggtttcctcaatctgagtggcaaacccacacacagaacaacgatgtacaacttcccaaccaaagctggtcagtgtggaggagtggttacaagtacagggaaagtgattggaattcatattggaggaaatggaaagcaagggttctgtgcggcattaaagagaagttactttgctactgagcaaggtgagattcagtggatgaaatctaacaaagagactggccgctacaacatcaatggtccaacccagaccaagctggaacccagtgtgtttcatgatgtgtttgaaggtaagaaggagcctgcagcactcagtgcgaaggacccaaggttggaagttgactttgaggaagctctgttcagcaagtacattggcaacgccattcatgagccagatgaatacatcatccaagcagccaaacattactccaaccaactgaagcaacttaacattgacactagcaggatgagcatggaggatgcttgctatggaacagagaatttggaagcaattgaccttagcaccagtgcaggatacccttacaatgctttaggcattaagaagaggcaaatcttggaccctaccaccagagatgtcaccaaaatgaagtattacatggacaagtacgggctagatctaccattttccacctacatcaaggatgaactgagaagcaaagaaaaggtgaagaagggaaaatccagactaattgaagcatcaagcctgaatgattcagtgtacatgagaatgtgttttggacacttgtttgagaagttccatgagaacccaggcaccatcacaggatctgcagtaggagcaaaccccgacaccttttggagtaagattcctatccttctcccaggtagcctgtttgcttttgattacactggttatgatgctagcctgagcccagcatggtttagagcattagagatcgttttgagagatctaggttatgatgatgaggctgtcagtcttatcgagggtataaatcactcacaccacatctatcgcaataagacatactgcgtagttggtggcatgccctctggctgttctggtaccagcatcttcaatagtatgataaataacatcattattaggacccttttgattaaaacattcaagggtgttgacctagatgaattgaatatgattgcatatggtgatgatgtgctagcaagttacccatttccaattgactgtgcagaattggcaaaaaccggtagggagtatggcttaattatgacacctgcagacaagtcatcttgttttaatgaagtcacttgggagaatgcaacattcttaaagagaagtttcaaaccagatgaacaattcccattccttatccacccagtcatgcctatgtcagagatccacgagtccatccgttggaccaaggatgcacgcaacactcaagatcacgtgcgttcactgtgtctcttggcttggcacgctggaagggaggagtacaatgaatttgttgaaaagattagaacagtaccaattggcaaagtactgtcaatccctcagtatgacaacctgaggaggatttggcttgaatctttct-aaa-atttgaaactgaattgatt-------------------aa---------------tttgatcc-aattcggc-cgatcatgccagttct--g-ggcttgtaaaa---gctg--------gcatgtga-caattac-cc-taaccca-g-tagggt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>EF667344.1_Human_enterovirus_92_strain_RJG7_complete_genome
-----------------tttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-g-cggcgttagtactctggtatcacggtacctttgtatgcct-g-ttttatc-----tccct---t---cccc----------c--gtaacgttagaagaatgaacaaaa---------------gacaat-tagcaaatccaccaacccaggtgggttttcg-tcaagcacttctg-tttccccggacctagtaccaataagctgt-gcccacggctgaaggggaaaacgttcgttatccggctacctacttcgagaagcc-tagtaccaccaatgattgtctcaagtgttacgctcagca--caa-cccc---agtgtagttcaggtcgatgagtcaccgaa-ttccccacgggcgaccgtgtcggtggctgcgttggcggcctgcctgc--------gagtttcactcgcaggacgcttgattcatgacatggtgcg-aagagcctattgagctaggcagtagtcctccggcccctgaatgcggctaatcctaaccacggagccatgcgtcacaaacca-gtggc-gtcatggtcgtaacgagcaattctgtggcggaaccgactactttgggtgtccgtgtttcc--tgtt---ttatttaccttggctgcttatggtgacaatc-ta-------gagttgtcatcatatagcgattggattggccatccgg--------------atattac----------------tttgtg-tgatttatctcttgctcgtaagcaa--------------ttttaaatagttt-atagcatcat-------------------------------tatgggagctcaagtatccacccaacaatctggaacccacgaaaacaccaacgtggctactg-gtgggtccaccattcattataccaccattaattattataaagattcctatgctgcttcggccaacaagcaggacttcagtcaagatccaagcaagttcacccaaccagtagtggatgtgctcaaagagtcggcagtcccactcaaatctccatcagcagaagcctgtggctacagtgacagggtgtgccaaatgacagtcggtaactccaccatcacgacacaggaggcagctaatgtagtagtaggatatggtgagtggcctgaatattgtagtgactcagatgcaactgctgtcgacaaaccaacaagaccagacgtttcagtcaataggttttacaccctgtcagcaaaattatgggagtcaa------------------ctagcaaaggttggtattggaaattccccgatgtcttaactgaaacaggcgtgttcggccagaacgcccaatttcactatctgtataggtcaggctttgccatccatgtgcagtgcaatgcgagcaagttccatcaaggtacgcttctagttgcatgtttacctgagtacacgaatggtagaagcgatgcaaccaatactcctgctg---atgcaaaacacccatcatacaacgccacacagcctggtccagatggtaaggttctagctttcccgtatgtgctagattctgggatagctgtttctcaattgcttgttgcccctcaccaatggatcaacctcagaacaaacaactgtgccactataatcatgccatacgcgaatgcagtgccttatgactcagcattgaaccactgtaattttggtttgtttgtaatccctattgccccactggcctacaatgatggtgctacatcagctgtgcccataacagttaccattgcaccgctctgtgctgaattcgccggactgagaaatgctgtcactcaaggcttaccggttgagttaaagcctggtagcaatcaatttcttaccacagacgatggtgtatccgcacccatactccctggatttcacccaacaccactgattcacataccaggagaggtcaacaacttgttgcagttgtgtcaaattgagagcatactcgaagtcaacaa----------tgttcc--------atctgcatccca----gatgcagagacttctaataccagtgtcagtgcagagtt------cggttgatcagctgtgtgcttcatttagagtggacccaggtagagatggaccatggcaatctacaattgtaggtcaattatgcaggtactatacacaatggtctggttcgctggaggtcaccttcatgttcacaggcagttttatggccacaggcaagctcctgattgcttacacgcctcctggtggaacacaaccgacaagccgagctgtggcaatgctaggtacccatgttatctgggactttggtctacaatcctctataacattagtgattccctggattagcaacacacatttcagaacaaatgcctcaggaacctactttgattactacactgcaggcatagttactatctggtaccaaacaaactttgtagtcccagcaggtgctccaactagtgcctaccttatagccctgggtgctgctcaaccaaacttcaccatgcggctatgtaaggatactgatgaaatctcccagactgcagtgttacaaggtgacatcaaagatatgttagagactcac--a---tcaactccac--------------------------agcgcataaagttctcaacagtgtcaa---tagtgggtcaacc--------agtacaggagctgacactagtgcaagctctcatagcctcatgacagggtccgcaccagcattacaggcagcagagacaggtgcaacatcagtcacctcagatgagtcaatgatagagacaagatgtgtacacaaccatcacagtgttgctgaaaccagtttagaaaacttcttcggaagggccgcccttgttgggatggcaaccctactcacatctgaggatag----tgccaatggttttaccaactggccaattgacataatgggatatgtgcaacagcggaggaagttggaaatctttacttacatgagatttgactctgaattcacttttgtttgtactgactcaacaggccagggacccaacgtggtaatacagtacatgtacatcccaccaggcgcccccgcaccaactgccagagactcatttgcatggcagtccgccacaaatccgtccgtgtttgtcaaagcatctgatcctcccgcgcaagtatcagttccctttatgtcaccagcatcagcttatcagtggttctatgatggataccccacatttggtacacaccctgcatctggtgatattaattatggtatcagtcccaacaacctcttcggaacatttgcatttagagtagtaggttctgaaaatataacaaccaaactaactgtcagaatatacatgagaatcaagcatgttagagcatggatcccaaggccaatgaggagccaaccgtacatattgaagaactacccaaatttcaatggaaa----tgatattagacacatggctaaagataggactagtat---aaccac---------------------------------------aactgga------------------------------------------gccttcggtcagcaaagtggagccgtatacgtgtgcaattacagaattgtcaacagacatttggctacaaagaatgattgggacaaccttgaatgggaggactaccaaagagacatccttgtttccaggacgaatgcacacggctgtgacagaattgctagatgcaattgcagcactggagtgtacttctgtaaatcagcaaacaagcactacccggtttccttccagggacccggacttgtgcatgtccaggcaaatgagtactatcctgaaagataccagtctcatgtcctattagcaaatggaatcgctgtggcaggtgattgtggtggcatcctgagatgccatcacggcgtgatcgggctggtcaccatgggtggtgatggattggttgggtttgctgacctcagagaccttctgtggcttgaggatgaagtgatggaacaaggcgtcacagattatatcaaa-ggcttgggcgacgcttttggcactggattcactgaatctatctctagagaaatccagaacatcaaagacacactcattggttcagaaggagtagttgaaaagatcttaaagaacctggtcaagttgatctcagctttagtcataattgtcaggagtgagtatgatctggtcactgttacagcaacacttgcattgattggttgtacaggcagtccatggaggtggctcaagacaaaggtggcctctattctgggcatccccatcgttcaaaagcaatcagactcttggttaaagaaattcaatgacatggctaacgcagctcgtggtcttgaatggatagcaaacaaaattagcaagtttattgattggattagagacaagattgtgcccattgcaagagaaaaagctgaatttatcaacaaccttaaacagctcccc-ttgctggagaaccaaatcaacaacctggagcaggctgctgctagtcaagagagtctggaacagctatttggtaacatccagtatttagcaat---------caactgcaggaaattccaaccactttacgcagctgaagcaaaaagagttttctctatggagaagagaatggtcaactacatgcagttcaagggcaaacaacgtattgaacctgtatgtttgattatcagaggctccccagggacaggaaaatccctggcaactagcataattgctagagccattgcagagaagttcaattctagtgtatactcactaccaccagacccagaccattttgatggatacaaacaacaagttgttacagtcatggatgatttatgtcaaaatcctgatggaaaggatatttcacttttctgtcaaatggtttctaccgttgaattcatcgcaccaatggcctcactggaagaaaaaggcattgctttcaattcaaaatttgttattgcatccactaattcgggtaacattattgtaccaactgtgtctgactctgaggctattagaagaagattctacatggattgtgacatcgaggtcccagacagttttagattggaaagtggcaaattagatgcaggtagagcagctaaattgtgttcagaaaataacactgccaatttcaagagatgcagtccattggtatgtggtaaagccatccaactgagagacagaaaatcgaaagtgagatacagcttggattcagtgatttcagaactcattagagaatacaacaacagaatgtcagttggaaacaccattgaggcactattccaaggaccaccacagttcagacccctcacaatt---tctct---ggacacaccagctcctgatgccattgcagaccttttgagaagtgtggacaatgaagaggtcagagaatactgc-aaagagaaaggatggataatccctgatgtgccaacaaatctggagagacattacaacagagccattgcgctaatccagtccattactaccattttagctgtggtgtcaatggtgtatgtcatctacagactatttgctggtttccagggtgcttactcaggcatgcccaagacagcagtaaagaaaccagttctaagaacagcagttgcacaaggtccagggttagactttgccatttccctgcttaaaaagaacatcagaaaagtacagacagaagaaggacatttcaccatgcttggtgtcagagacagacttgcagtgcttccaagacatgcaaagccaggcaaaactatttggatggagggtaagcaagtgactgtgcttgatgcagttgaattggttgatgaacaacaagtaaatctggaactcaccctagttacattggacatgaatgaaaaattcagagatatcactaaatttattcctgaatcatttgaacactgcatggatgccactctcatcatcaacacagaacagatgccatcaatgtttgtcccagttggagatgttcaattctatggcttccttaacctgagtggtaaacccacacacagaacaatgatgtacaacttcccaaccaaagctggtcagtgtggaggagtggttacaagtacaggaaaggtgattgggattcatgttggaggaaatggaaagcaagggttctgtgcggcattgaagagaagttactttgctactgagcaaggtgagattcaatggatgaagtccaacaaggaaactggccgctacaatatcaatggtccaacccagaccaaactcgaacccagcgtgtttcatgatgtgtttgagggtaagaaggaacctgcagcacttagtgcaaaggacccaaggttggaggttgactttgaggaagctctattcagtaagtacattggcaatgctattcacgaaccagacgagtacatcatccaagcagccaaacactactcaaatcagctgaagcaactcaacattgacaccagcagaatgagcatggaggatgcttgctatgggacagaaaatttggaagcaattgatctcagcaccagtgcaggatatccttacaatgctttgggcatcaagaagagacaaatcttagatcccaccactagggatgtcactaaaatgaagtactacatggacaagtatggattagacctaccattctctacatacatcaaggatgaactgaggagtaaagaaaaagtcaagaaaggaaaatctagactaattgaggcatcaagtctaaacgactctgtgtacatgaggatgtgctttgggcacttgtttgagaagttccatgagaacccaggtaccatcacaggatctgcagtaggagcaaaccctgacaccttttggagtaaaattcctatccttctcccaggtagcttgtttgcttttgattacaccggttatgatgctagcctgagcccagcatggtttagagcattggagatggttttaagagatctaggttatgatgatgaggctgtcagtcttatcgagggcataaatcactcacaccatatctatcgcaataagacatactgcgtagttggtggcatgccctctggctgttctggtaccagcatcttcaacagcatgataaataacatcattataaggacccttctgattaaaacattcaagggtattgacctagatgagttgaatatgattgcatatggtgatgatgtgctagcaagttacccattcccaattgactgcgcagaattggcaaaaactggtagggagtatggtctgattatgacacctgcagataagtcatcttgctttaatgaagttacttgggagaatgcaaccttcttgaaaagaagtttcaaaccagatgaacaattcccattccttatccacccagtcatgcctatgtcggagatccatgagtccattcgctggactaaggatgcacgtaacacccaagatcatgtgcgttcactgtgtctcttggcttggcacgctggaagggaggagtacaatgaatttgttgaaaagattagaacagtaccaattggcaaagtgctgtcgatccctcagtatgacaacttgaggaggatttggcttgaatctttct-aaa-acatgaaattgaattgatt-------------------aa---------------tttgatct-aattcggc-tgatcatgccagttct--g-ggcttgcaaaa---gctg--------gcatgtga-caattac-cc-taaccca-g-tagggt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AF326764.2_Simian_enterovirus_46_strain_OM22_(P15)_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccaca-gggcccac-t-gggcgctagcactctggtattacggtacctttgtgcgcct-g-ttttatt-----tccct---t---cccc-at-------t--gtaactttagaagaaacaaaactg---------------gatcaa-tagcccatcacccaaaccagggtggtgacga-tcaagcacttctg-tttccccggatctagtatcaatagactgt-tagcacggttgaaggagaacg-attcgttatccggctcactacttcgagaagcc-tagtaccactatgaaagtgaaatagcgtttcgctcagca--caa-cccc---agtgtagatcaggccgatgagtcactgca-ttccccacgggcgaccgtggcagtggctgcgttggcggcctgcctgt--------gggtccc-cccacaggacgctaattcatggacatggtgcg-aagagcctattgagctagtgagtagtcctccggcccctgaatgcggctaatcctaaccacggagcatccgctggcagtcca-gccag-tagggtgtcgtaacgggtaactctgtggcggaaccgactactttgggtgtccgtgtttcc--tgtt---ttacttactttggctgcttatggtgacaatt-ta------cggattgttgccatatagctattggattggccatccggattataaacacacaatactgttatt--ttttcc----tttttg-ggatttcttccct-----tgagttt--------------tactaattatttt-atcttgttaatagttttaaagttgaatac----------attatgggagcccaagtatcaacccagaagtcaggttctcatgagaacaccaactttgctgctg-gaggttctaccataaattataccaccattaattattacaaggactcatacgcagcaagtgcaaacaagcaagatttctcccaagatccgtctaaattcactcaaccagtggtgaacgcattgaaggaaggtgcaccagtgctcaaatccccatctgctgaagcatgtggttatagtgatagggttgcccaacttacagtaggtaactcgactattaccactcaggaagctgctaacatcactgtcggctacggtgtttggccagagtattcaaaagatacggaggctactgccgttgacaaacccaccaagccagatgtttccgtcaacagattctacacactctcagctaaactctggcaatcca------------------actctaaagggtggtactggaagtttcctgatgtgctcactgagactggcgtttttgggcaaaacgctcagtttcattacctttatagatcaggtttttgcatacacgtgcagtgtaatgctagcaaatttcatcagggtacactcttagttgcagctataccagaatatgtggtcgctagggcgagtgacgatgctaaacccaaca---cagcaccacaccctaactatgctgtcactcaaccaggacctgggggagaagaattggctttcccatatttgttagataatggcactgcactctcacaagctccaatataccctcatcaatggataaatttgagaaccaacaactgcgcaactatagtcatgccatacatcaattgccttccttttgattcagcactgaatcattgtaattttggattgattgtcatccctgtagcccctcttgcttacagtagcggtgccacctcagccatacctatcacactgtcaattgctccgttgaattctgaatttgccgggttgcgtcaagctatcgcccaaggattaccaacagagctcaagccagggacaaatcagtttctgacaacagatgatggcgtagcagcgcccattctcccagggtttcaccccaccccagaaatgttcatcccaggagaagtgaagaatttgttggagattgcccaagtagaatcaatattggaagtaaacaa----------tctgacaaccaatgagacaaatccc------atggagagactcctcattccagtgagtgtacaatctg------aggttgacaaattgtgtgcatcatttagaacggatcctggaagggatggaccatggcaatccacccttgtagggcaactatgcagatactatacccagtggtcagggtcgttggaagtcacattcatgttcactggatcttttatggccacagggaaactgctaattgcttacacaccaccaggagcaccacagcctgcaactagagcacaagccatgttaggaacacacatagtgtgggactttggattgcaatcttctgccactctagtcatcccttggattagtaatacccacttcaggggcaccagcactaatggcgtttacaattactactcaagtgggatagtaacaatatggtaccaaaccaactttgtggtgcctgatggagcgcctacaagtgcttacatcatagctctagctgctgcccaacgcaacttcaccatgagattatgcaaggatacagaccaaatctcccagaccgccatcatgcaagg---------agataaattggaggcg--------------gccat--------------------------agaaaacaaagtacttagtactatagaatctgctggcacacac--------tccactgctgctaacacaagtgagagcacccataacataggcactggacacactccagctctgcaggctgctgaaacaggtgcgacttctacaacaagtgatgagtcaatgatagaaactcgctgtgtggtgaacagacacagtgtggcagagacctccataaccaacttctatgctcgtgctgggttggtaggttatttaaaactacttactagtaaagacac----acctaatgggtttactaattgggacatagacatcatggcatttgtacagcaaaggcgaaagctggagattttcacttatatgcgctttgatgctgaattcacatttgtggcaaccagtgaggacggaagcacaccaaacaccatgctacaatacatgtatgtaccccctggtgccccgaaacccactggaagagacacctttgaatggcaaacggccaccaatccatcagtctttgtgaaaatatcagacccaccagcacaagtgtcggtaccatttatgtcagcagcaagtgcttaccagtggttctatgatgggtacccaacatttggacaacacccagcatcagacaacatcaattatggcatttgcccaaacaacatgctaggcaccttctctcttcgagtggttggatcaggcagcataaccagtaaaatcaaggttaggatcttcatgaggataaagcatgttagagcgtggataccacgtccactcagaagtcaacaatacatgatcaggaactaccccaactttccc---ac----aacagtgaagtgcttagccgctagtagaaataacat---caccac---------------------------------------tactggc------------------------------------------ccactcggtcaacaatctggagcagtctatgtcggaaattacaggatagtgaacagacacctggcaacacggaatgactgggacaaccttgtgtgggaggattacaaccgtgatctcctaattagccaaaccaacgcacacgggtgtgacaccattgcccgatgcaactgctcaactggcgtttacttctgtcaatctatgagaaaacactacccagtctcatttcaaggacctggcctagtccatgttaacaagaatgaatactacccagagaggtatcaatcacatgtgcttttagctgtaggacattctgaaccaggagattgtggtggtattcttagatgccagcatggtgtgattgggatagtaaccatgggaggaaacaacctggttggctttgctgatctccgtgatcttctctggttggatgacgaggtcatggaacaaggggttaccgactacatcaaa-acccttggtgatgcttttggcactggcttcacagatgcagtctccagagaagttgagtcaatcaagaactacatgttaggctcagagtctgtggtagaaaaagtgatcaagtacctggtcaaagttgtgtctgcattggtcattgtcgtgaggagtgagtatgatttggtcaccatcactgctaccttggccttgatagggtgccacgggagtccttgggcttggttgaagagtaaagtggcagcagccctgggaatccctattgctcagaaacaaggtgattcatggttaaagaaatttaatgacatggccaatgctgcaagaggacttgagtggatttccaacaaaatcagcaagttcattgattgggtcaaggataagatcatacctgtagccagagagagagtggagttccttaccaatcttaaacaattaccc-ctcctcgaaaaccaaattgcaaccctggaacaagcagcagcgtctcaaaaagatttggaggcgatatttggaaatgttagttatctggcaca---------cttttgtagaaagtttcaaccactgtatgctagtgaggctaagagaatctttgcactggagaaaagggtgaacaattacatgcagttcaagagcaaacaccggattgaacctgtatgtttgataatcagaggaccaccaggtacagggaagtcacttgctactggaataatagctagagcaattgcagaaaaatacaactctagtgtgtactcattaccgccagaccctgatcattttgatggatacaaacagcaagtggttacagctatggatgatttgtgccaaaatccagatggaaaagatatgtccttgttctgccaaatggtgtcaacagtagatttcatccctcctatggcatccctggaggaaaaaggagtctcattcacctcgaaatttgtgattgcttccaccaatgctggaaacattatagtgcccacagtgtctgacagcgatgccatcagaagaaggttctacatggattgtgacatcgaagtgacagactcttacaaaactgaaaccaacagattggatgcaggtagagctgctcgcttgtgcagtgaaaataacacagcaaactttaagaagtgcagcccattggtgtgcggtaaggccattcagttaagggataggcgcactaaggttagatatagtgtggactcagtggtttcggaacttattagagaatacaacaacaggtcagctgttggcaacaccattgaagcacttttccagggacccccaaaattcaagcccatcagaatcgaacttca---agagacccccgcacccgatgccataagtgaccttttggccagtgtggacaatgaggaggttaggcagtactgc-agagagaaaggctggattattcaggacaaacccactaacattgaacatcacttgaacagggcagtcttggtagtgcagtccattgccactattgtagcagtcgtctcattagtatatgttatatacaggatctttgcaggctttcaaggagcttattctggagcacctaaacaggcactgaagaaaccacaacttagaactgctactgtacaaggcccaggcctagactttgctatctccttactcagaaggaacatcagacaggtgcagactgacgccgggcatttcaccatgctggggataagagaccacttagctgtgttgcccagacatgcagaaccaggtaacaccatatgggttgaacacaaactagtgaaggttcttgatgcagtagaactagtggatgagcaaggtgtaaatctagagttgacattggtaaccctcgatgggaatgaaaagttcagagacattaccaaatttatcccagaaagattggaaggtgggacagatgcaacccttatcattaacactgaacaaatgccgtcgatgtttgtgccagttggagatgttgtggagtacggcttcctgaatctgagtggcaaacccacacaccgtactatgatgtataatttccccacaaaagcaggccagtgcggtggtgtaataacatctgtgggtaaaatcttgggaatccacataggggggaatggcagacaaggattctgtgcagctctcaagaggggatattttgcatctgctcaaggtgaaatacaatggatgaaaccaaataaggagacaggaaggtacaatatcaatggaccaaccaagaccaagctggaacctagtgtctttcatgatgtcttcccagggacgaaagaacctgcagcacttagctccagagacccacgtctagaagttgattttgaaactgcacttttctcaaagtacataggcaataaagtgatggaacccgatgagtacatggtccaagcagctcaccattacgctaatcaactgaaacaattggacatatccactgagaaaatgacaatggaagaagcatgctatggcactgagaacctggaagccatagatctcagtactagtgcaggatacccatacaatgcacttagcattaagaagagagacatcttggaccccaccaccagagatgttagcaagatgaaagcttatatggacaaatatggcctggacctaccttactccacatatgtcaaagatgagcttagggacatctcaaaggttaagaaagggaaatctagattgatagaagcttcaagtttgaatgactcagtctatctcagaatgtgctttggcagactttatgagaaatttcatgcaaatccaggcacatgcactggatcagcggttggatgtaacccagacactttttggagcaaaatcccaatcatgcttcccggacatctgtttgcatttgattacacaggttacgatgctagcctcagcccagcgtggttcagagccttggagatagtgctcaaagatctgggctatgatgatgatgccatcagtatgatagaggggataaaccactcccatcacatatacagaaacaagacttactgtgtcttgggaggaatgccatctggttgctcagggactagcattttcaattcaatgataaataatattataatcagaacactaatgattaaaactttttctggaattgatctggatgcattgaatatgattgcatatggtgatgatgtcctagcaagttacccattcctaattgattgtgctgaattggctaagactggactggaatatggattagtcatgacacctgctgataaatccagttgcttcaatgaagtgacctgggagaatgcaacattcttgaaaagagggttcaaaccagatgatcaataccctttccttatacatccaaccatgccaatgaaggagatacatgaatctatcagatggactaaggaccctcgtaacaccaatgaacatgtgaggtccctttgtcttcttgcatggcacaatggaaaggatgtgtatgatgaatttgtcaacaaaattagatcagtaccaattggcaaggtactgtctatacctgaatatggaaatctaagaagattgtggttagaaaactttt---a-acttggaatttcaattcgg-------------------aa---------------cccgctct------------------ccactact--g-ggctagagtaa---agtg--------gagagtgagcaattga-cc-taaccta-g-taggtc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AF326754.2_Simian_enterovirus_SV19_strain_M19s_(P2)_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-acccacccgca-gggcccac-t-gggcgctagtacactgatatcacggtacctttgtacgcct-g-ttttatc-----tccct---a---cccc-ca-------tc-gtaacttagaagcttaacaataca---------------gatcaa-tagcctctgcaccaaaccaggtgtggaatga-tcaagcatttctg-ttaccccggacctagtaccaataggctgtgtcaaacggctgaaggggaaaaagttcgttacccggccacctacttcgagaagcc-tagtagcatcactgaagctgtgaagcgttacgatcagca--caa-cccc---agtgtagttcaggtcgatgagtcactgca-ttccccacaggcgactgtagcagtggctgcgttggcggcctgccctt--------ggtctctgaccaagggacgctttggagtggatatggtgcg-aagagcctattgagctaggtggtagtcctccggcccctgaatgcggctaatcctaaccccggagctggtgcacacaaacca-gtgtg-tggccagtcgtaatgagcaattctgggatggaaccgactactttgggtgtccgtgtttcc--tgtt---tcacttaccttggctgcttatggtgacaattgta-------tagttgtcatcatatagctattggattggccatccgg--------------atattattcttg-tgttta----tttgtg-taatttgatataa------------------------------------------------------tttagaaccctgtat---------aagaatgggagctcaagtttcaactcagaggactggctcgcatgaaaacgccaatatggcaatgg-atggttctaccattaattacaccaccatcaattactacaaggagtcctatgctgcctctgcaaccaaacaggagtttagtcaggacccatccaaatttacgcaaccagtagttgatgtaattaaggagagttcagtccctcttaaatcaccatcagcagaggcgtgtggttatagtgacagggttgcgcaactaactctgggtaattccactattaccacccaagaagctgctaacataacagtgggctacggtgagtggcctgaattctgctcaaacactgatgcaacagctgtggataaaccatcacggcccgatgtctcagtaaacagattctacacactcagtgctaagttgtgggagaaga------------------cgtccaaggggtggtattggaaatttcctgatgtgttgacagagactggagttttcggtcagaatgcacagtttcactacctgtacaggtcagggttctgcattcatgttcagtgtaatgctagtaagtttcaccaaggaactctgcttgtggtcgcaatcccagagttcactgtggccagatcagacacctcaactaaccctgcta---ctgcaaaacacccaagctacgcagcagcacaaccagggaaaaatggcaaagaattttcaatcccctacgtccttgattcaggtgtcccattatctcaagctcttatatacccacatcaatggatcaatctgaggacaaacaactgcgccacgatagtgatgccatacattaatgctgtgccttatgacagtgctttaaaccactgcaattttgggttagctattatccctgtggcgcctcttgactataacgcaggtgcaactacagctataccaatcacagtcactattgccccaatgaattcggagtttgcaggcttgcgtaatgctgtgacccagggaatcccagtcgaactaaaaccaggatccaaccaattcttgaccactgatgatgaagtgtctgcacctattttgcctggattccatccaacaccagaaatacatattccaggtgaagttaagaacctgttggagattgcccaagtggagtcaatattagaagtcaacaa----------cttaaaaacaaatgaaaacgacccc------atgcggcgtctcctcatacctgtgagtgttcaatcag------ctgtagaccaactgtgcgctagtttccgtgttgatcctggccgcgcaggaccatgggaggcaacactcgtaggtcagttgtgtcgctattacacccaatggtctggatcattagaggtgactttcatgtttactggttcttttatggcaacaggtaaaatgctgatagcttacacaccaccagggggtgcacagccaacatcgagagaagttgcgatgctcggtacacatgtcatatgggactttggcctacaatcatctgtcaccatgattataccgtggattagcaacacacactatcgaacacaggcaactaacaactactttgagtattacaccagtggaatagtaacattgtggtaccagaccaattatgttgtaccagaaggagcccccaccagtgcttacatcatcgcattgggagctgcccaaccaaatttctcactaaaactttgtaaagacactgaatcaatttctcagacagctatcttgcaaggtgacccagaatcatcactggagtcgttt--------------gt--------------------------ggagaatcaggttagtaaaactcta-----------------------------acagcagctgacactaaacctagcagccacaacatttcaacaggtaatacaccagctttacaagctgcagaaactggggcaacatcaaacaccagcgatgagggcatgattgagacaaggtgtgttgttaacaaacattctgttgcagaaacctccatagagcacttttatggacgtgcagcactagtgggtcttgtgtctatacttacttcagagacatc----agcaaatggcttcaccaattgggatgtagacatcatgggttttgtgcagcagaggaggaaattagagatcttcacctacatgcgctttgatgctgaattcacctttattgccactgctgatgatggacaagcagattctacaatgatacagtatatgtacataccaccaggtgctcccaaaccaacacagagagattcatttgaatggcagtcagccaccaatccttccatctttgttaggatggctgacccaccagcccaagtttctgtccctttcatgtcccctgcttccgcctaccagtggttctatgatgggtacccaaccttcgggacccacactgcatccacggacagctggtatggagtgtgcccaaataacctcatgggaacctttgccgtgagggctgtggggtcaggaaatatcaaatctaacattagaatcagagtgtacatgaggatgaaacacattagagcttgggtgccaagaccattcagaagccagccataccttctaaagaattatccaaacatggatggtac----aaatttgaagtgcgctagcaccagcagagccaagat---aacaac---------------------------------------cacaggg------------------------------------------gccttcggtcaacagtccggtgctatctatgtctgcaattatagaattgtcaacaggcatttagccactgaagaagattggaagaatcttgtgtgggaggattatcaaagagaccttcttgtttccaacaccagagctcacggctgtgacactattgctaggtgcaaatgtcaaacaggagtttacttctgtaaatcccagaataaacactatccaattagtttccagggccctggtctggttcacgtgcaagcaaatgaatactaccctgaacggtatcagtcacatgtgttgttggccaacggcgtttcaaaagccggtgattgtgggggaatactcaggtgtcaacatggtgtaatcggtcttgtgaccatgggtggtgacggcctggttggctttgctgacattagagacctgctgtggttagaagatgatgtgatggaacaaggtgttacagattacatcaaa-ggtcttggagatgccttcggaactggatttacagagtctatcaccagagaagtccaagcattgaaagatcatctcttaggagcagagggaatcgtggaaaagatcctcaaaaacttggtcaagattgtgtcagcactggtcatagtaatcaggagtgactacgacctagtcacgatgactgcaacacttgctttgatcggttgccacacaagcccatgggcatggttgaaatcaaaagtgtgtagcttccttggcctaccgatagcgcaaaagcagggagacaattggctgaagaaattcaatgacatggcaaatgctgctaagggcttggagtgggttgcgatcaagatttccaagttcatagattggttgaagcagaaagtcgtcccagctgctagagagaaagtggaattcctcaacaacctcaagcaacttcca-ctactggaaaaccaggtcagcaatcttgaacaagcggctgctagccaggatgatttggaagccctgtttggaaatgtacagtacttggctat---------tcattgcagaaaataccaacccttgtatgcttcagaggctcgcaggattgccactttagagcgcagagtcaacaactacatgcagttcaagaacaaacaacggattgaacctgtatgtttgatcatccgcggcgctccaggcacaggaaagtcactcgccacaggcatcattgctagagctattgcagaaaaataccactctagtgtttactccttgccaccagacccagaccattttgatggttaccgccagcaagttgtaactgttatggatgatctgtgtcagaacccagacgggaaggacatctccttgttctgtcagatggtctctactgtggaattcataccccctatggcatcattggaggaaaaaggtctaccttttacatcaaagtttgtgatagcatcaacaaattccagtaacatcatagtgcccactgtttcagatagtgaagcaattaggcgccgtttctatatggattgcgacattgaggtccctgaatcttacaggcttgaaaatggaaaactggatgcgtcaagagcggcgaggttgtgctctgaaaacaacacagctaactttaagaagtgcagtcctttggtttgtggcaaagccatccagctgaaagatagaaaatccaaagtaaggtatagcttggactcagtggtttcagagctcattagagagtataacaacagaaatagtgttgggaacactattgaagccctctttcaaggaccccctgtatttaaaccaatcagcata---tctct---gacagaaccagcacctccagccattgctgacctgttgtcatcagttgatagtgaagaagtcaggcaatattgt-aaggacaaaggctggatcatcccagaagtgcccacaaacattgagagacatgtcaacagagctgtggctattttgcaatctattaccacagtggtggccgtagtgtccttagtttatgtcatctacaaattgtttgctggttttcagggtgcttattcgggtatgcctaaaactgcactgaagaagccagtgttgagaactgccacagtgcaaggaccctgccttgactttgccttgtccctacttcgtaggaatattagacaagtgcagacagacaaaggccactttaccatgctcggcgtgcgtgaccgcattgctgtactgcctcgccatgctgagccaagtggaaccatctggatcgaaggcaagcaggtcaaagtcttagatgctgttgagttggtagatgaacaacaagtcaatcttgaactcactcttgttactcttgacatgaacgaaaagttcagggacattactaaatttatcccagaagacattgaatcaatctcagaagccactctagtgattaacacagaacaaatgccctcgatgttcgtccctgtaggaaaagttgagaactatggattcctgaacttgagtggaagaccaacccaccgaacacttatgtacaatttcccaaccaaagctgggcaatgtggtggagtggtcaccagtgttggtaaaattattggaattcatgttggaggaaatgggcgccagggcttttgtgcagccttgaagcggtgttacttcaccactgagcaaggtgagattcaatggatgaaaccaaatagtgagactggtagatacaatattaatggccccactaataccaaattggaaccaagtgtcttccatgacgtgtttgaagggaagaaagaaccagcagcattgtcatccaaagacaagagattagaggttgactttgaggaagccctctttttaaagtacataggtaataagattcatgaacctgatgaatacatgattcaagcagctcaccattacgccaaccagctcaagcagctgaacatagacacatccaaaatgtctatggttgatgcctgttatggaactgaaaacctggaagcaatagaccttagcactagtgctggttacccatacaatgcattaggcgtcaagaaaaggcagattctgaacccagagactcgtgatgttactaaaatgaaattctacatggacaaatatgggttggatttaccatattccacctatgtgaaggatgagttaaggagcattgaaaaagtcaagaaagggaaatcacgcctcattgaagcaagcagtctgaatgattcagtttacaccagaatgtgcttcgggcatctattcgaggctttccacgccaatccaggcactattactggatctgctgtcggctgcaacccagacactttctggagcaagattcctatactcctaccaggatcactctttgcctttgattacacaggttatgatgctagtttgagccctgcatggtttagagctctagaaatagtactcaaggagctaggatatgattctgaagccatcagtgtgatagaaggtataaaccactcacatcacatatatagaaacaaaacatattgtgtgttgggaggcatgccatctggttgctctgggactagtgtgttcaattccatgataaacaacatcataataagaaccttgcttattaggactttcaaaggaattgatttggatgaattgaacatgattgcatatggtgatgatgtcctggcaagttaccctttcccaattgattgtcaagaattagcaaatactggaaaggagtacgggttaatcatgactcctgctgataagagtagttgtttcaatgaagtgacatgggagaatgctacttttcttaaaaggggcttcaagccagatgaacagttccctttcctcatccacccaactatgccgatgtctgaaattcacgagtctatcaggtggactagagatgcacgaaacactcaagatcacgtgcgatctctgtgccttctggcatggcataatgggaaagaaatttatgatcaatttgtgaaaaagatcagatcagtgcctattggcctggcactgtctataccagagtacaacaaccttcggcgactctggttggaacaatttt---a-gatctgaatttaaataatataaatgaaaatttgaattaaa---------------ttcgattt-aattcggc--ctcctcaatggctct--g-ggctagttgtg---gcca--------ttggggat-caatagt-ct-taaccca-g-taagact-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AF326761.2_Simian_enterovirus_SV43_strain_OM112t_(P12)_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccacccaca-gggcccac-t-gggcgctagtactctggtattacggtacctttgtacgcct-g-ttttaca-----accct---t---cccc-ca-------t--gtaacttagaagcaacaaataaac---------------gaccaa-tagcacactcaccaatccagatgagtgatgg-tcaagcacttctg-ttaccccgggcttagtaccaatagactgc-catcgcggttgaaggggaaaacgctcgttatccggctctctactgcgagaagcc-tagtaacgccttagaaatgctcaagcgttgcgctcagca--caa-cccc---agtgtagctcaggtcgatgagtcactgca-ttccccacgggcgaccgtggcagtggctgcgtttgcggcctgcctac--------agctctacgctgtaggacgcttgtgtatggacatggtgtg-aagagcccattgcgctagggagtagtcctccggcccctgaatgcggctaatcctaaccccggagctggtgcttgtaaacca-acaag-tggccagtcgtaatgggcaactctgggatggaaccgactactttgggtgtccgtgtttcc--tgtt---ttatttaccttggctgcttatggtgacaatc-ta-------gtgttgttgccatatagcgattggattggccatccgg--------------atattgttttagacacttg----tgtttg-tgagtagatctct------------------------------------------------------tctgacataggatat---------aacaatgggtgcacaggtttcaacacagaaaactggatcacatgaaaacgccaacatggcagtag-gaggctccaccatcaactacaccactattaattactataaggagtcctacgcagcatctgcaaccaaacaagatttcacccaggacccatctaagttcactcagcccgttgtcgatgctattaaagaatcctctgtcccactcaagtcaccatcagctgaagcgtgtgggtatagcgatcgtgttgcgcagctgacactaggaaactccacagtcacaactcaagaagcagcaaacatcactgtcgcttatggtgagtggcccgagtattgtccagatacagatgctacagcagttgacaaacccactaggccggatgtttctgtcaacaggttctatacccttagtgctaaactatggcagaaag------------------attcaaagggatggtactggaaattcccagatgtgctcacagaaattggagtctttggacaaaatgctcagttccactacctgtacagatctggtttctgcattcatgttcagtgcaatgcgagcaagttccatcagggtactctacttgttgttgctataccagaaatgacagttgcgagatctagtggtgacaccaagcccacca---ctgcaccccacccttcttacgcagctgcacagcctggcccaaatggcaaagagtttgctttcccttacgttcttgatgcaggggtccccatctcccaagcactgatctacccccaccaatggatcaacctcaggaccaataactgtgctaccatagtagtgccctatataaattgtgtgccctatgattcagcattgaatcactgcaattttggcttggcagtggtccctgtggcaccactcgattacagtgagggtgctactactgccataccgattactatcaccatagcgcccatgtgttcagagtttggtggactccgcaacgcggttactcaagggctgccagttgtgctcacgcctggatctacccagtttcttaccaccaatgatggggtgtctgcaccgatcttacctggatttcaccctacgccagcaatacatatacctggagaagtgaagaacatcctagaaatcatgcaggttgagtcaatcttggaagtcaacaa----------cttgaactcaaatgagtctacaccc------atgaacaggctcgttattccagtaagtgtgcagtcca------gcgtggaccagctgtgtgcaagctttcgagtggatcctggtcgggcagggccatgggaatcaacgttagtgggacagtactgcaagtactacacacaatggtcgggctcgctggaagtcactttcatgttcacaggctcctttatggccacaggcaaaatgttgatcgcttacacaccgccaggtggggcccaacctgccaaccgccgcactgccatgttaggaacacatgtcatatgggattttggtctacaatcttcagtcacccttgtgattccatggattagcaatacacactacaggacacaagcaacaaacaattactttgaatattattcgtcagggatcgtgaccatatggtaccagaccaattatgtggttcctgacggtgcacccaccagtgcttacataatagcactgggtgctgcacaaccaaatttcagtttgaagttgtgtaaggacactgaagccatttctcaaactgccatcttgcaaggtgaccca--------atcgaaggtgctttag---ataatgccat--------------------------cagcgctcacataagcagtgcactg-----------------------------acagcagcagacacacgcccaagcacacatcaagtagcgactggcaacactcctgcgctgcaagctgcagagactggggcgacatcgaatgctagtgatgagagtatgatcgagactcggtgtgtagtcaacaaacacagtgttgctgaaactagtgtagaacattttttctcaagggcagcattagttggttatattagcatactgacatcaacaacgac----cgctaatggcttcacaaattgggatattgacatcatgggttttgtccaacagcgcaggaaagtggaaggtttcacatacatgaggtttgatgctgagttcacatttgttgccaccgcagacgacgggcaagcagacacgacgatgctccagtatatgtacatcccacctggagctcccaaacccactcaaagggactcattcgagtggcaatctgcaaccaacccatctctgtttgttcggatgagtgaacctcctgcacaagtgtcagttcctttcatgtctcccgcctctgcataccaatggttttatgatggctacccaacatttggaacacatagtgcttccacagacagttggtatggtgtgtgccctaataacctcatgggcacctttgctgttagagcagtggggtcaggttctataactgctaacatcagaattagggtttatatgaggatgaagcacattagggcatggatccccaggcccttaagaaaccagccttatgtgctaaagaattaccctaactttgatggaac----aaacatcaagtgcagctccaccagcaggcagagcat---caccac---------------------------------------cacagga------------------------------------------gcttttggtcaacagtctggtgcagtctatgtttgcaactataggatagtgaacaggcacctagccactcaagaagactgggataacctggtctgggaggattatcagagagacgtgctggtgtcaaacacccgtgcgcacggatgtgaccagttggcacgctgccaatgtagtgctggtgtatacttttgcaaatcccaaaacaagcattacccagtgtgtttccagggacctgggttggttcatgcacaggcaaatgagtactaccccgagcgttaccagtcacatgtactactagctagtgggatttcaaaaccaggcgattgtggtggaatactgcgctgccaacacggtgtcattggaattgtgacaatgggtggtgatggactagttgggtttgctgacttgagggacctattgtggctagaagatgatgtcatggagcaaggagtcacagattacattaaa-ggcctgggtgatgcttttggcactggcttcaccgactccatatctagagagatttccaacttgagagaccagttactcgggtctgagggagtggtggaacgcattttgaagaacttagttaaggtgatctctgcactagttattatcattcgcagtgattacgatatggtcacagctgccgccacacttgctctgatcgggtgtcacacaagcccctgggcctggcttaagtccaaagtgtgctcgcttttgggaatacccatggctcaaaaacaaggtgattcgtggttgaagaaattcaatgacatggcaaatgccgccaaaggcttggaatggattgcaaacaaaattagcaagttcatagattggctaaaagaaaagattattccagctgcccgggacaaagttgattttcttaataatctgaagcagttgccc-cttttagaaaatcaggtgagcaatcttgaacagtcagcagcgagccaggatgacctagaagcactctttgggaatgtgcaatacttggctat---------caattgtagaaaataccaacccctttatgcctctgaagccaggagagtggcaacattggagaagagagtaaacaactacatgcagttcaagagcaaacaacgtattgaaccagtatgtttaattattagaggcccaccaggcacaggaaaatcccttgccacaggcatcatagctagagccattgctgagaaatacaactctagtgtctactctctcccaccagaccccgatcattttgacgggtacaggcaacaagtggtgacagttatggatgatttgtgtcaaaatcctgacggaaaggacatctcccttttctgccagatggtttctactgttgagttcatcccacccatggcctcacttgaagaaaaagggctcccgtttacttccaagtttgtgattgcatctaccaactccagtaatattattgtaccaaccgtctcagactgtgaagctatcagaagaaggttttacatggactgtgacatagaagtacctgactcctacaaattagagaacaataaacttgatgcatcgagagcagccaaattgtgttctgagaataacactgcaaattttaagaagtgcagccctctagtgtgtggtaaagcaatacaactgaaagatagaaagtccaaggtgagatatagcttagattctgttgtttctgagctcattagggagtataataacaggtgtagtgttggtaacacaattgaagcactgttccaaggaccccctgttttcaaacctattaagatc---tctat---ggaccaaccggccccgccagctattgcagatctgcttgcttccgtagataatgaggaggtcagacaatactgt-aaagaacaagggtggataataccagacgttccaaccaatgtagaacgacatgtgaacagagcagttgccatcctgcaatcagttaccactattgttgctgttgtgtcattggtatttgtcatctacaaattgttcgccggctttcaaggtgcttacacaggtatgccacgcacagcattgaagaaacccacactcaggaccgcaacagttcaaggcccagcactagattttgccttatccctgctcagaaagaatatcaggcaaatccaaactgatagagggcacttcaccatgctgggagttagagacagacttgctgtggtgcctagacatgcagaaccaggaaacactatctggattgagggtaaacaggtgaaagttttggacgctgtggaactggtggatgagcaacaagtaaatttagagctcacgctggtaacccttgacatgaatgagaagttcagggacataacaaagtttattcctgaagacattgaagtagccaacgaagccactcttgtgattaacacgctccagatgccatccatgttcatcccagttgggaaggtagagaattatgggtttctaaatttaagcgggagacccacacatcgtacattgatgtacaatttcccaactaaagcagggcaatgcggaggggtagtgaccagtgtagggaaaatcattggaatccacgttgggggcaacgggaaacagggcttctgtgctgccctaaagagatgctacttcaccagtgaacaaggcgagatccagtggatgaagccaaacacagaaactggcaggtataacatcaatggacctaccaaaaccaagctggagcccagtgtcttctttgatgtctttgacggcgagaaagaacctgcaccattgacagcaaatgacaaaaggcttgacgtgaattttgaggaagccttattttcaaaatatattggtaacaaaatccatgaaccagatgaatacatgattcaagctgccaagcactattccaatcaactgaagcaactgaacattgacacgtctagaatgtcaatggaagaggcctgctatggcactgagaatctagaagccattgaccttagtactagtgcaggctacccatacaatgccataggcatcaagaagagggacattctaaatcctgagaccagggatacttctaaaatgaagaggtacatggatgagtatggattggacctcccttactccacttatgtcaaggatgaacttaggagtaaagaaaaagtgaaaaaggggaaagccaggctaattgaagcaagcagccttaatgattcagtttacacccgtatgtgttttggccacttatttgaagcatttcatgcaaacccaggtaccgtcaccggttctgctgtggggtgtaacccagatactttctggagcaagctacctattctcttgccagggtcactcttcgcttttgactatacggggtatgatgcaagtcttagcccagcatggtttagggctctagagttggtgctgagggatctaggttacgatgagcaggccatatcagtgatagagggcatcaaccattcccaccatatctatagaaacaagacatattgtgtgcttgggggtatgccatccggatgctctggtaccagtatattcaactctatgatcaataacatcattatcaggaccttgctgatcagaaccttcaaggggattgacctggatgagttgaatatggtggcatatggtgatgatgtgcttgctagctaccctttccccatagattgtcaggaacttgctaacacagggaaagaatatggcttgatcatgacacctgcagataagagtagctgtttcaatgaggtcaactgggaaaatgccacatttcttaagagagggtttaaaccagataaacagtttcctttcctcatacatcctaccatgcccatgaaagagatccatgagtcgatcaggtggaccagggatgcgcgcaacacacaagaccacgtgcgctcactgtgtcttcttgcttggcataatggaaaggaggtgtatgataaatttgttgaaagaataagatcagtgccaattgggctggtactgtccataccagagtacaacaatttgagaagactttggttagaaaatttct---a-att----ggttaaat-----------------------aa---------------ttcggcct-aattagacaaagccttga-ggttct--g-ggctagttgtt---gcct--------caaggttt-caataac-ct-caaccca-g-tgaggtt-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>AF326750.2_Baboon_enterovirus_strain_A13_complete_genome
------------------ttaaaa--cag-cct-gtgggttg-t-tcccactcaca-gggcccaa---gtggcgtagaactctggtatcacggtacctttgttcgcct-a-ttttaaa-----acccc---c---cccc-cc----------gtaacttagaagaa-----------tgaacaaaacaa--actcag-tagtaggtaatgcat-ccagcattatcacgagttaagcacttctg-tttccccgg---tgatggagataggctgt-acccacggctgaaactctatg-atccgttatccggtatggtactgcgagaagtc-tagtaccgtcatgaaagttgctaagcgttacgctcccca--gtaacccca-actggtagttctggctgatgagtctgggca-ctccccacaggcgactgtggcccaggctgcgttggcggccagctcatcctcattgagggtga--------gacgcttaaatacagacatggtgag-aagaacctattgcgctaccatatagtcctccggcccctgaatgcggctaatcccaacctcggagcattcaactgcaaacca-gcagt-gagagtgtcgtaacgcgaaagtccgaggcggaaccgactactttgggtgtccgtgtttcctgtttta----ccttttgatggctgtttatggtgacaatttagagtattcagattgtcatcataaactactaggtcttgccaaccgg--tctataata----------------tattat----tttgtt-ggatttgttccac-----tcacgccaattatttacaa----------------aattttgcttagattcctactcgcaaacttaagatatcaaagatgggtgcacaagtttctacacaacaatctggaactcatgaaaacactaatgttgcaacag-gaggatcagccatacactacaccaccatcaactactacaaagactcttatgcagcatcagcaaacaagcaagatttttcacaggacccttcaaagtttacacaaccagtggtggatgccttaaaagagggcgtgccagtcctgaaatcaccatcggctgaggcatgtggatacagtgatagattagctcaattgacagtggggaattcaacaatcaccactcaggaagctgctaatatagtggtgggctatggagaatggccagaatacagcaaggatacagaggccactgcagtggataagccaacaagaccagatgtatcagttaatagattttacaccctgtccgccaagttgtggcaaaaga------------------attcaaatggttggtactggaaattccctgacgtgttgactgaaaccggagtctttggccaaaatgcacaatttcactatttatacagatcaggctttgtaatacatgtacagtgtaatgctagtaaattccaccaaggaaccctactagtagctgccctaccagaatatgtgaatgcacgctctgatgccacgacggaccccaaga---aagcagcacaccccccatttgtagcaacacagccaggaccaagtggtgaggatcttgcatatccatatgtcttggatgctggtatcccattgagccaattgaccattgcacctcaccaatggattaaccttaggacaaacaattgtgctactatagtaatgccatatgtgaattgtgttccctttgactcagccttgaaccattgtaactttggtttatttgtaattccagttgcacccttggattatatgacaggtgctacaaccgctataccaatcacggtcactatagccccattatgttcagagtttgctgggttgaggcaagctgtcaaacagggtttgccagtggaacttaaaccaggtacaaatcaattcttaactactgatgatgatgatgcccccccagtgcttccgggatttcaagctacacctgaaatgcacattcctggtgaggtcaccaaccttttagagctttgtcaagtggaaagcattctggaagtgaacaa----------------cacaacaactgctaccggt------gtggaaagattgttgattcctgtgtcagtacagagta------atgtggatgagttatgctgtgcttttagggttgaccctgggagaaacggtccatgggagtccaccataattggccaaatatgcagatattatagccagtggtcaggttcattagagatcaccttcatgtttactggttctttcatggccacaggtaaaatgctgattgcctacaccccaccaggaggagctcagccatcaaaccgcactactgccatgctagggacacatgttatttgggacttcgggttacaatcgtcagtgactctagttgtgccttggatttcaaatacccacttcagaacgcaagcaacatcaggatactatgaatactacactgcaggtatagttaccatgtggtatcaaaccaactatgtggttcctgaaggggcacccacgtctgcgcacatcattgcactggctgctgcccaacccaattttagtttgaagctggccaaagacacagactatctagcccagagtgcagtgctacagggagataca--------attgagtcagtgatta---acaacacaat----------------------------------------------------------------------------aaccacagtggcaaacacagctctcagcactcacatgcttgaaactggcaacaccccagcactacaagctgcagagaccggtgctacgtccacagcaagtgatgaaaacatgattgaaaccaggtgtgtggttaacaaacatggtgttgctgaaacatccattcaacacttctttgctaggtctgctctggtcggaatggtgacattgttgacatcagaaactac----agcaaatgggttcacaaattgggacatagatataatgggttacatacaacaaaggagaaagttggaaatgttcacctacatgaggtttgatgctgaattcactttcataaccactacacttaacggacaggctacaaattccaccgttcaatacatgtatgtaccacctggttcaaaagtacctacagctcgtgactcatttgtatggcaaactgcaacaaacccatctatatttgttaagatgagtgatccaccagcccaagtttcagtcccatttatgtcaccagcatgtgcttaccagtggttctatgatggatatccaacttttggcagtcaccccgcttctacagatggatggtatgggatctgtccaaacaacctgatgggtactttctgtttgagagtagtaggatcaggatccatcaaagactcaatcattgtgagaatctacatgaggctgaaacatatcagggcttgggttccacgacctattagatcacaaccatacatgctgaagaactaccccaattttgatgggaa----taacatcaaacatgtcacaaatagaaatagcataaa---aacagcaggt------------------------------------------------------------------------------------gcttttggccaacaaagtgggtctgtctatgtgggatcatacaaaataacaaatttgcacttggccaccgaatttgatttgggttcagaaatttggagatcatatgaaagggacttgattgtgtcaaccaccaccgcatcaggttgtgacaacattgcacgatgtaattgtaactcgggtgtgtacttttgtaagtccaagtccaaacactacccagttgtctttcagggacctggtcttgtgcaagtgggagctaatgattactatccagacagataccaatcacacgtcctactcggtgttggaccagcagaagccggagattgtggtggcatccttaggtgtcaacatggagtgattggtattctcacagctggtggtgatggactggtggcatttgcagacattcgtgatctactttggatagaggatgatgcaatggaacaaggaatcacagactatgtacaa-caactagggagtgcatttggtgctggttttaccaatgaaatagctgaaaagacacaacaaatcaaagagatgctcattgggcaggattccatattagagaaatgtctaaaagctatgataaaaatcatctcagctatggttattctgattaggaatagtgatgatattgttacagtgacagcaaccttagcgctgattgggtgctccacaagcccctggcaatggttgaaatccaaggtttgctcttattttcaaattccaatggcccaaaggcaagctgatagttggatgaaaaagtttacagaagcaacaaatgcagccaaaggaatggaatggttggccaacaaaatatcaaagtttattgactgggttaagtccaaagtggttccacaagtgaaagaaaaactggagttcctgtcgaaattgaaacaacttcca-ttattagaaaatcaaattgccaccctagaacacagtgcccctagccaggatgcgcaagaggtgctgcatggaaatgtacagtaccttgcaca---------ttactgtaggaaatttgccccattgtacgcagctgaggctaagcgtgtgtttcaattagagaagaaaatgaacaattacatgcagttcaagaccaaatcacgcattgaacctgtatgcttactaattcatggttctcctggagcaggaaaatctgtggcttccagtttgataggaagatcaattgctgacaaattgaatagctccgtgtactcactgccgcctgatccagatcattttgatgggtacaaacagcaagcagtagtgattatggatgatttgtgccaaaacccagatggaaaagatgtgtcactgctttgtcaaatggtatccacagtggac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