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Click to view | Rank | C-score | Cluster size | PDB Hit | Lig Name | Download Complex | Ligand Binding Site Residues |
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1 | 0.26 | 32 | 1qn4A | Nuc.Acid | Rep, Mult | 18,20,46,47,64,66,69,71,73,113,114,116,156,157,161,163,173,175,185,188 |
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2 | 0.22 | 26 | 1qnbA | Nuc.Acid | Rep, Mult | 9,10,18,45,46,51,53,60,62,64,75,76,116,157,158,175,177,179,181,183 |
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3 | 0.03 | 3 | 5iy8P | Nuc.Acid | Rep, Mult | 10,53,64,75,158,175,177,179,181,183 |
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4 | 0.03 | 3 | 5fmfQ | Nuc.Acid | Rep, Mult | 9,10,44,45,46,47,49,51,53,60,62,64,66,75,76,78,157,158,177,179,181 |
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5 | 0.02 | 2 | 1ytbA | Nuc.Acid | Rep, Mult | 9,10,18,20,45,46,47,51,53,62,64,66,69,71,73,75,113,114,116,156,157,158,161,163,173,175,177,179,181,183,185,186 |
| Download the residue-specific ligand binding probability, which is estimated by SVM. |
| Download the all possible binding ligands and detailed prediction summary. |
| Download the templates clustering results. |
(a) | C-score is the confidence score of the prediction. C-score ranges [0-1], where a higher score indicates a more reliable prediction. |
(b) | Cluster size is the total number of templates in a cluster. |
(c) | Lig Name is name of possible binding ligand. Click the name to view its information in the BioLiP database. |
(d) | Rep is a single complex structure with the most representative ligand in the cluster, i.e., the one listed in the Lig Name column.
Mult is the complex structures with all potential binding ligands in the cluster. |
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[Click on S313700_results.tar.bz2 to download the tarball file including all modeling results listed on this page]
Please cite the following articles when you use the I-TASSER server: |
1. | J Yang, R Yan, A Roy, D Xu, J Poisson, Y Zhang. The I-TASSER Suite: Protein structure and function prediction. Nature Methods, 12: 7-8, 2015. |
2. | J Yang, Y Zhang. I-TASSER server: new development for protein structure and function predictions, Nucleic Acids Research, 43: W174-W181, 2015. |
3. | A Roy, A Kucukural, Y Zhang. I-TASSER: a unified platform for automated protein structure and function prediction. Nature Protocols, 5: 725-738, 2010. |
4. | Y Zhang. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9: 40, 2008. |
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