P A U P * Version 4.0a (build 157) for Macintosh (X86) (built on Aug 10 2017 at 07:18:06) Running on IA-32 architecture (64-bit word length) SSE vectorization enabled Multithreading enabled for likelihood using Pthreads Compiled using Intel compiler (icc) 11.1.0 (build 20091012) -----------------------------NOTICE----------------------------- This is an alpha-test version that is still changing rapidly. It will expire on 1 Jan 2018. Please report bugs to david.swofford@duke.edu ---------------------------------------------------------------- Processing of file "~/Desktop/Chelonioid.nex" begins... Data matrix has 48 taxa, 266 characters Valid character-state symbols: 012345 Missing data identified by '?' Gaps identified by '-' *** Skipping "NOTES" block *** Skipping "MESQUITECHARMODELS" block Character types changed: Of 266 total characters: 37 characters are of type 'ord' (Wagner) 229 characters are of type 'unord' *** Skipping "MacClade" block 'tree(s) from TNT, for data in C:\users\Val\Desktop\Chelonioid.tnt' Processing of input file "Chelonioid.nex" terminated due to errors. Processing of file "Chelonioid.nex" begins... Data matrix has 48 taxa, 266 characters Valid character-state symbols: 012345 Missing data identified by '?' Gaps identified by '-' *** Skipping "NOTES" block *** Skipping "MESQUITECHARMODELS" block Character types changed: Of 266 total characters: 37 characters are of type 'ord' (Wagner) 229 characters are of type 'unord' *** Skipping "MacClade" block 'tree(s) from TNT, for data in C:\users\Val\Desktop\Chelonioid.tnt' 42 trees read from TREES block; time used = 0.01 sec (CPU time = 0.00 sec) Note: Input trees are rooted but current criterion and/or option settings would specify unrooted trees. (You can deroot the trees using the 'DerootTrees' command.) *** Skipping "MESQUITE" block Processing of input file "Chelonioid.nex" completed. paup> ConTree; Strict consensus of 42 trees: /----------------------------------------------------------------------------------------------------------------------------------------- Solnhofia parsonsi | | /------------------------- Allopleuron hoffmanni | | | /--------------------------------------------------------------------------------------+ /------------ Ctenochelys stenoporus | | \------------+ | | \------------ Lophochelys | | | | /------------ Archelon ischyros | | /------------+ | | | \------------ Protostega gigas | | /-----------+ | | | | /------------ Alienochelys selloumi | | | \------------+ | | | \------------ Ocepechelon bouyai | | /-------------------------------------------------+ | | | | /------------ Rhinochelys nammourensis | | | | | | | | \------------------------+------------ Rhinochelys pulchriceps | | | | | | | \------------ Rhinochelys amaberti | | | | | | /-------------------------------------------------- Bouliachelys suteri | | | | | | /------------+ | /------------ Desmatochelys padillaii | | | | /-----------+ /------------------------+ | | | | | | | \------------ Santanachelys gaffneyi | | | | | | | | | | | | \------------+ /------------ Rhinochelys elegans | | | | /------------+ | /------------+ | | | | | | | | \------------ GS63_GS67 | | | | | | \-----------+ | +-----------+ | | | \------------------------- Rhinochelys cantabrigiensis | | | \-----------+ | | | | | \-------------------------------------------------------------- Desmatochelys lowi -------------+ | | | | | | \--------------------------------------------------------------------------- Chelosphargis advena | | | | | +---------------------------------------------------------------------------------------------------- Calcarichelys gemma | | | | | \---------------------------------------------------------------------------------------------------- Syllomus aegyptiacus | | | | /-------------------------------------------------- Argillochelys africana | | | | | +-------------------------------------------------- Argillochelys cuneiceps | | | | | | /------------ Caretta caretta | | | /------------+ | /------------+ | | \------------ Lepidochelys kempii | | | | /-----------+ | | | +------------+ \------------------------- Lepidochelys olivacea | | | | | | | | | \------------------------------------- Chelonia mydas | | | | | | | | /------------ Eochelone brabantica | | | +-------------------------------------+ | | | | \------------ Pacifichelys spp. | | | | | | | +-------------------------------------------------- Erquelinnesia gosseleti | | | | | | | /-----------+-------------------------------------------------- Euclastes acutirostris | | | | | | | | | +-------------------------------------------------- Euclastes platyops | | | | | | | | | +-------------------------------------------------- Euclastes wielandi | | | | | | | | | +-------------------------------------------------- Itilochelys rasstrigin | | | | | | | | | +-------------------------------------------------- Mexichelys coahuilaensis | | | | | | | +-------------------------------------------------+ +-------------------------------------------------- Natator depressus \-----------+ | | | | | | +-------------------------------------------------- Puppigerus camperi | | | | | | | | /------------ Tasbacka aldabergeni | | | +-------------------------------------+ | | | | \------------ Tasbacka ouledabdounensis | | | | | | | \-------------------------------------------------- Terlinguachelys fischbecki | | | | | \-------------------------------------------------------------- Ashleychelys palmeri | | | +---------------------------------------------------------------------------------------------------------------- Carolinochelys wilsoni | | | +---------------------------------------------------------------------------------------------------------------- Corsochelys haliniches | | | | /------------ Dermochelys coriacea | +---------------------------------------------------------------------------------------------------+ | | \------------ Mesodermochelys undulatus | | | +---------------------------------------------------------------------------------------------------------------- Nichollsemys bareri | | | \---------------------------------------------------------------------------------------------------------------- Procolpochelys grandaeva | \----------------------------------------------------------------------------------------------------------------------------- Toxochelys latiremis paup> ConTree / indices treeFile='/Users/Val/Desktop/consensus.tre'; Strict consensus of 42 trees: /----------------------------------------------------------------------------------------------------------------------------------------- Solnhofia parsonsi | | /------------------------- Allopleuron hoffmanni | | | /--------------------------------------------------------------------------------------+ /------------ Ctenochelys stenoporus | | \------------+ | | \------------ Lophochelys | | | | /------------ Archelon ischyros | | /------------+ | | | \------------ Protostega gigas | | /-----------+ | | | | /------------ Alienochelys selloumi | | | \------------+ | | | \------------ Ocepechelon bouyai | | /-------------------------------------------------+ | | | | /------------ Rhinochelys nammourensis | | | | | | | | \------------------------+------------ Rhinochelys pulchriceps | | | | | | | \------------ Rhinochelys amaberti | | | | | | /-------------------------------------------------- Bouliachelys suteri | | | | | | /------------+ | /------------ Desmatochelys padillaii | | | | /-----------+ /------------------------+ | | | | | | | \------------ Santanachelys gaffneyi | | | | | | | | | | | | \------------+ /------------ Rhinochelys elegans | | | | /------------+ | /------------+ | | | | | | | | \------------ GS63_GS67 | | | | | | \-----------+ | +-----------+ | | | \------------------------- Rhinochelys cantabrigiensis | | | \-----------+ | | | | | \-------------------------------------------------------------- Desmatochelys lowi -------------+ | | | | | | \--------------------------------------------------------------------------- Chelosphargis advena | | | | | +---------------------------------------------------------------------------------------------------- Calcarichelys gemma | | | | | \---------------------------------------------------------------------------------------------------- Syllomus aegyptiacus | | | | /-------------------------------------------------- Argillochelys africana | | | | | +-------------------------------------------------- Argillochelys cuneiceps | | | | | | /------------ Caretta caretta | | | /------------+ | /------------+ | | \------------ Lepidochelys kempii | | | | /-----------+ | | | +------------+ \------------------------- Lepidochelys olivacea | | | | | | | | | \------------------------------------- Chelonia mydas | | | | | | | | /------------ Eochelone brabantica | | | +-------------------------------------+ | | | | \------------ Pacifichelys spp. | | | | | | | +-------------------------------------------------- Erquelinnesia gosseleti | | | | | | | /-----------+-------------------------------------------------- Euclastes acutirostris | | | | | | | | | +-------------------------------------------------- Euclastes platyops | | | | | | | | | +-------------------------------------------------- Euclastes wielandi | | | | | | | | | +-------------------------------------------------- Itilochelys rasstrigin | | | | | | | | | +-------------------------------------------------- Mexichelys coahuilaensis | | | | | | | +-------------------------------------------------+ +-------------------------------------------------- Natator depressus \-----------+ | | | | | | +-------------------------------------------------- Puppigerus camperi | | | | | | | | /------------ Tasbacka aldabergeni | | | +-------------------------------------+ | | | | \------------ Tasbacka ouledabdounensis | | | | | | | \-------------------------------------------------- Terlinguachelys fischbecki | | | | | \-------------------------------------------------------------- Ashleychelys palmeri | | | +---------------------------------------------------------------------------------------------------------------- Carolinochelys wilsoni | | | +---------------------------------------------------------------------------------------------------------------- Corsochelys haliniches | | | | /------------ Dermochelys coriacea | +---------------------------------------------------------------------------------------------------+ | | \------------ Mesodermochelys undulatus | | | +---------------------------------------------------------------------------------------------------------------- Nichollsemys bareri | | | \---------------------------------------------------------------------------------------------------------------- Procolpochelys grandaeva | \----------------------------------------------------------------------------------------------------------------------------- Toxochelys latiremis Statistics derived from consensus tree: Component information (consensus fork) = 26 (normalized = 0.565) Nelson-Platnick term information = 209 Nelson-Platnick total information = 235 Mickevich's consensus information = 0.219 Colless weighted consensus fork (proportion max. information) = 0.209 Schuh-Farris levels sum = 2846 (normalized = 0.165) Rohlf's CI(1) = 0.344 Rohlf's -ln CI(2) = 123.171 (CI(2) = 3.22e-54) Consensus tree(s) written to treefile: ~/Desktop/consensus.tre paup> describe 43/apolist:; paup> describe consensus/apolist:; paup> describe consensus/apolist; All trees have been cleared from memory. paup> GetTrees file=consensus.tre; Processing TREES block from file: ~/Desktop/consensus.tre Keeping: trees from file (replacing any trees already in memory) 1 tree read from file Time used = 0.03 sec (CPU time = 0.02 sec) Note: Input trees are rooted but current criterion and/or option settings would specify unrooted trees. (You can deroot the trees using the 'DerootTrees' command.) paup> describe 1/apolist; Tree description: Optimality criterion = parsimony Character-status summary: Of 266 total characters: 37 characters are of type 'ord' (Wagner) 229 characters are of type 'unord' All characters have equal weight 137 characters are constant 33 variable characters are parsimony-uninformative Number of parsimony-informative characters = 96 Gaps are treated as "missing" Multistate taxa interpretation depends on "{}" versus "()" designation ("min" values for CI, RI, and RC are minimum-possible character lengths) Character-state optimization: Accelerated transformation (ACCTRAN) AncStates = "standard" Tree 1 ("Strict"): Tree length = 469 Consistency index (CI) = 0.3753 Homoplasy index (HI) = 0.6610 CI excluding uninformative characters = 0.3106 HI excluding uninformative characters = 0.6894 Retention index (RI) = 0.5534 Rescaled consistency index (RC) = 0.2077 /----------------------------------------------------------------------------------------------------------------------------------------- Solnhofia parsonsi | | /------------------------- Allopleuron hoffmanni | | | /-------------------------------------------------------------------------------------50 /------------ Ctenochelys stenoporus | | \-----------49 | | \------------ Lophochelys | | | | /------------ Archelon ischyros | | /-----------51 | | | \------------ Protostega gigas | | /----------53 | | | | /------------ Alienochelys selloumi | | | \-----------52 | | | \------------ Ocepechelon bouyai | | /------------------------------------------------55 | | | | /------------ Rhinochelys nammourensis | | | | | | | | \-----------------------54------------ Rhinochelys pulchriceps | | | | | | | \------------ Rhinochelys amaberti | | | | | | /-------------------------------------------------- Bouliachelys suteri | | | | | | /-----------63 | /------------ Desmatochelys padillaii | | | | /----------60 /-----------------------56 | | | | | | | \------------ Santanachelys gaffneyi | | | | | | | | | | | | \-----------59 /------------ Rhinochelys elegans | | | | /-----------61 | /-----------57 | | | | | | | | \------------ GS63_GS67 | | | | | | \----------58 | +----------64 | | | \------------------------- Rhinochelys cantabrigiensis | | | \----------62 | | | | | \-------------------------------------------------------------- Desmatochelys lowi ------------75 | | | | | | \--------------------------------------------------------------------------- Chelosphargis advena | | | | | +---------------------------------------------------------------------------------------------------- Calcarichelys gemma | | | | | \---------------------------------------------------------------------------------------------------- Syllomus aegyptiacus | | | | /-------------------------------------------------- Argillochelys africana | | | | | +-------------------------------------------------- Argillochelys cuneiceps | | | | | | /------------ Caretta caretta | | | /-----------65 | /-----------73 | | \------------ Lepidochelys kempii | | | | /----------66 | | | +-----------67 \------------------------- Lepidochelys olivacea | | | | | | | | | \------------------------------------- Chelonia mydas | | | | | | | | /------------ Eochelone brabantica | | | +------------------------------------68 | | | | \------------ Pacifichelys spp. | | | | | | | +-------------------------------------------------- Erquelinnesia gosseleti | | | | | | | /----------70-------------------------------------------------- Euclastes acutirostris | | | | | | | | | +-------------------------------------------------- Euclastes platyops | | | | | | | | | +-------------------------------------------------- Euclastes wielandi | | | | | | | | | +-------------------------------------------------- Itilochelys rasstrigin | | | | | | | | | +-------------------------------------------------- Mexichelys coahuilaensis | | | | | | | +------------------------------------------------71 +-------------------------------------------------- Natator depressus \----------74 | | | | | | +-------------------------------------------------- Puppigerus camperi | | | | | | | | /------------ Tasbacka aldabergeni | | | +------------------------------------69 | | | | \------------ Tasbacka ouledabdounensis | | | | | | | \-------------------------------------------------- Terlinguachelys fischbecki | | | | | \-------------------------------------------------------------- Ashleychelys palmeri | | | +---------------------------------------------------------------------------------------------------------------- Carolinochelys wilsoni | | | +---------------------------------------------------------------------------------------------------------------- Corsochelys haliniches | | | | /------------ Dermochelys coriacea | +--------------------------------------------------------------------------------------------------72 | | \------------ Mesodermochelys undulatus | | | +---------------------------------------------------------------------------------------------------------------- Nichollsemys bareri | | | \---------------------------------------------------------------------------------------------------------------- Procolpochelys grandaeva | \----------------------------------------------------------------------------------------------------------------------------- Toxochelys latiremis Apomorphy lists: Branch Character Steps CI Change ----------------------------------------------------------------------------------------------------------------------------------------------- node_75 --> Solnhofia parsonsi 13 (PA parieta-squamosal contact) 1 0.286 1 --> (01) 40 (PL secondary palate) 1 0.250 0 --> 1 45 (VO vomer-pterygoid contact) 1 0.333 0 --> 1 67 (PT medial contact) 1 0.500 0 --> 1 72 (PT proc. pteryg. externus) 1 0.182 1 --> 2 81 (BO deep C-shaped) 1 0.125 0 --> 1 110 (DE width triturating surface) 1 0.143 0 --> 1 137 (SUP number of suprapygals) 1 0.500 1 --> 2 node_75 --> node_74 1 (NA, presence/absence) 1 0.250 0 --> 1 30 (SQ sq-qudrate contact) 1 0.167 0 --> 1 69 (PT vertical flange) 1 0.500 0 --> 1 74 (PT medial ridge) 1 0.143 0 --> 1 88 (BS ventral surface shape) 1 0.200 0 --> 1 114 (SP splenial) 1 0.500 0 --> 1 142 (VE shape of vertebrals) 1 0.333 0 --> 1 150 (PLA posterior plastral fontanella) 1 0.667 0 --> 1 158 (EN shape in ventral view) 1 1.000 1 --> 2 163 (HYO termination ax. buttress) 1 1.000 0 --> 3 169 (XI shape of xiphiplastron) 1 0.500 0 --> 2 187 (CEV ventral keels) 1 1.000 0 --> 1 190 (CEV central articulation) 1 1.000 0 --> 1 209 (CA caudal centra) 1 1.000 0 --> 1 230 (PUP pubis lateral process) 1 1.000 0 --> 1 237 (HUM lateral process) 1 0.750 0 --> 1 245 (HUM-FEM length) 1 1.000 0 --> 1 249 (MAN paddles) 1 0.667 0 --> 1 253 (MAN-PES flattening of carpals and tarsals) 1 1.000 0 --> 1 257 (Shape of frontals) 1 0.133 0 --> 1 node_74 --> node_73 12 (FR direction orbits) 1 0.143 1 ==> 0 17 (PA foramen stap-tempor.) 1 1.000 1 ==> 0 35 (PM foramen prepalatinum) 1 0.250 0 ==> 1 42 (MX triturating surface definition) 1 0.333 0 ==> 1 66 (PT foramen palat. post.) 2 0.250 0 ==> 2 68 (PT contribution foram. palat. post.) 1 0.333 0 ==> 1 86 (BS rostrum basisphenoidale) 1 0.333 0 ==> 1 101 (PAr palatine artery) 1 0.333 2 ==> 1 198 (CEV cervicals 7 and 8 double) 1 0.333 0 --> 1 212 (CA chevrons) 1 1.000 0 --> 1 219 (SCA internal angle) 1 0.500 0 ==> 1 220 (COR coracoid vs humerus lenght) 1 0.500 0 --> 1 237 (HUM lateral process) 1 0.750 1 ==> 2 249 (MAN paddles) 1 0.667 1 ==> 2 255 (FEM femoral trochanters) 1 1.000 0 ==> 1 262 (Orbits position regarding the nares) 1 0.222 0 ==> 1 node_73 --> node_50 40 (PL secondary palate) 1 0.250 0 ==> 1 57 (QU proc. trochlerais oticum) 1 0.200 1 ==> 2 58 (QU musculatory facet of proc.t.O) 1 0.125 0 ==> 1 66 (PT foramen palat. post.) 2 0.250 2 ==> 0 81 (BO deep C-shaped) 1 0.125 0 --> 1 90 (BS dorsum sellae) 1 0.200 0 ==> 1 91 (BS foramen carotic laterale) 1 0.333 0 ==> 1 116 (CA parallel keels) 1 0.333 0 ==> 3 257 (Shape of frontals) 1 0.133 1 ==> 0 265 (Concavity of the anterior (external) surface of the premaxilla) 1 0.143 0 --> 1 node_50 --> Allopleuron hoffmanni 10 (FR orbit contribution) 1 0.105 2 ==> 0 35 (PM foramen prepalatinum) 1 0.250 1 ==> 0 115 (CA carapacial scutes) 2 0.333 0 ==> 2 140 (PY pygal notch) 1 0.167 1 ==> 0 170 (PLAS plastral scutes) 1 0.333 0 ==> 1 264 (Dorsal exposure of nasal cavity) 1 0.100 0 ==> 1 node_50 --> node_49 22 (JU medial process) 2 0.167 0 --> 2 39 (PL contribution upp. triturating surf) 1 0.143 0 --> 1 42 (MX triturating surface definition) 1 0.333 1 --> 0 98 (FN foramen nervi hypoglossi (XII)) 1 0.500 0 --> 2 123 (NU posteriomedial fontanelles) 1 0.400 0 ==> 1 262 (Orbits position regarding the nares) 1 0.222 1 --> 0 node_49 --> Lophochelys 133 (CO rib free peripherals) 1 0.600 0 --> (01) node_73 --> node_64 10 (FR orbit contribution) 1 0.105 2 ==> 1 45 (VO vomer-pterygoid contact) 1 0.333 0 --> 1 57 (QU proc. trochlerais oticum) 1 0.200 1 ==> 2 58 (QU musculatory facet of proc.t.O) 1 0.125 0 ==> 1 66 (PT foramen palat. post.) 1 0.250 2 --> 1 75 (PT posterolateral extension) 1 0.500 0 ==> 1 88 (BS ventral surface shape) 1 0.200 1 ==> 0 116 (CA parallel keels) 1 0.333 0 ==> 3 137 (SUP number of suprapygals) 1 0.500 1 ==> 0 153 (PLA hyo-hypo contact and shape) 1 0.667 1 ==> 3 197 (CEV cervicals 6 and 7 central) 1 0.500 1 --> 0 198 (CEV cervicals 7 and 8 double) 1 0.333 1 --> 0 247 (RAD curves towards anterior) 1 1.000 0 --> 1 251 (ULNR ulnare vs intermedium) 1 0.667 1 --> 2 263 (Skull height) 1 0.125 0 ==> 1 node_64 --> node_63 1 (NA, presence/absence) 1 0.250 1 ==> 0 4 (PF medial contact) 1 0.667 1 --> 0 203 (CEV cervicals 7 and 8 shape art.) 1 0.500 1 ==> 0 240 (HUM expansion lateral process) 1 1.000 0 ==> 1 241 (HUM medial concavity) 1 1.000 0 ==> 1 node_63 --> node_55 30 (SQ sq-qudrate contact) 1 0.167 1 --> 0 68 (PT contribution foram. palat. post.) 1 0.333 1 --> 0 111 (DE symphyseal ridge) 1 0.455 1 ==> 0 115 (CA carapacial scutes) 2 0.333 0 ==> 2 135 (CO costal 9 abs/pres) 1 1.000 1 ==> 0 170 (PLAS plastral scutes) 1 0.333 0 --> 1 244 (HUM scar for muscle latissimus) 1 0.500 0 --> 1 node_55 --> node_53 10 (FR orbit contribution) 1 0.105 1 ==> 0 13 (PA parieta-squamosal contact) 1 0.286 1 ==> 0 66 (PT foramen palat. post.) 1 0.250 1 --> 2 158 (EN shape in ventral view) 1 1.000 2 --> 3 160 (EPI shape and contacts) 1 1.000 1 --> 2 257 (Shape of frontals) 1 0.133 1 ==> 0 262 (Orbits position regarding the nares) 1 0.222 1 --> 2 263 (Skull height) 1 0.125 1 --> 0 265 (Concavity of the anterior (external) surface of the premaxilla) 1 0.143 0 --> 1 node_53 --> node_51 1 (NA, presence/absence) 1 0.250 0 ==> 1 21 (JU jugal-quadrate contact) 1 0.200 0 ==> 1 30 (SQ sq-qudrate contact) 1 0.167 0 --> 1 72 (PT proc. pteryg. externus) 2 0.182 1 ==> 3 node_51 --> Archelon ischyros 126 (NE number of neurals) 1 0.333 1 ==> 2 259 (Position of maxillary regarding the nares) 1 0.111 0 ==> 1 260 (Maxillary ventral surface) 1 0.125 0 ==> 1 node_51 --> Protostega gigas 114 (SP splenial) 1 0.500 1 ==> 0 257 (Shape of frontals) 1 0.133 0 --> 2 node_53 --> node_52 7 (PF dorsal exposure) 1 0.500 0 ==> 1 12 (FR direction orbits) 1 0.143 0 ==> 1 24 (QJ qj-maxilla contact) 1 1.000 0 --> 1 34 (PM fusion pm) 1 0.333 0 ==> 1 42 (MX triturating surface definition) 1 0.333 1 ==> 0 57 (QU proc. trochlerais oticum) 2 0.200 2 ==> 0 74 (PT medial ridge) 1 0.143 1 ==> 0 76 (SO crista supraoccip.) 1 1.000 1 ==> 0 98 (FN foramen nervi hypoglossi (XII)) 1 0.500 0 --> 2 node_52 --> Alienochelys selloumi 39 (PL contribution upp. triturating surf) 1 0.143 0 ==> 1 45 (VO vomer-pterygoid contact) 1 0.333 1 ==> 0 80 (BO anterior morphology) 1 0.333 1 ==> 0 258 (Shape of nasals) 1 0.444 0 ==> 2 262 (Orbits position regarding the nares) 1 0.222 2 --> 1 265 (Concavity of the anterior (external) surface of the premaxilla) 1 0.143 1 --> 0 node_52 --> Ocepechelon bouyai 10 (FR orbit contribution) 1 0.105 0 ==> 2 70 (PT pterygoid-exoccipital) 1 0.333 1 ==> 0 257 (Shape of frontals) 1 0.133 0 --> 2 263 (Skull height) 1 0.125 0 --> 1 node_55 --> node_54 86 (BS rostrum basisphenoidale) 1 0.333 1 --> 0 261 (Maxillary bulge over maxillary sulcus) 1 0.400 0 ==> 2 264 (Dorsal exposure of nasal cavity) 1 0.100 0 ==> 1 266 (Relative width of pmx) 1 0.222 0 ==> 1 node_54 --> Rhinochelys pulchriceps 21 (JU jugal-quadrate contact) 1 0.200 0 ==> 1 260 (Maxillary ventral surface) 1 0.125 0 ==> 1 node_54 --> Rhinochelys amaberti 73 (PT position pt respec bs) 1 1.000 0 ==> 1 258 (Shape of nasals) 1 0.444 0 ==> 3 node_63 --> node_62 140 (PY pygal notch) 1 0.167 1 ==> 0 258 (Shape of nasals) 1 0.444 0 ==> 4 node_62 --> node_61 116 (CA parallel keels) 1 0.333 3 ==> 0 142 (VE shape of vertebrals) 1 0.333 1 --> 0 169 (XI shape of xiphiplastron) 1 0.500 2 ==> 0 node_61 --> node_60 10 (FR orbit contribution) 1 0.105 1 --> 0 143 (VE position of ver. 3 and 4) 1 1.000 1 --> 0 150 (PLA posterior plastral fontanella) 1 0.667 1 --> 0 163 (HYO termination ax. buttress) 1 1.000 3 --> 1 258 (Shape of nasals) 1 0.444 4 --> 1 260 (Maxillary ventral surface) 1 0.125 0 ==> 1 263 (Skull height) 1 0.125 1 ==> 0 node_60 --> Bouliachelys suteri 4 (PF medial contact) 1 0.667 0 --> (01) 34 (PM fusion pm) 1 0.333 0 ==> 1 258 (Shape of nasals) 1 0.444 1 --> 3 node_60 --> node_59 10 (FR orbit contribution) 1 0.105 0 --> 2 39 (PL contribution upp. triturating surf) 1 0.143 0 --> 1 264 (Dorsal exposure of nasal cavity) 1 0.100 0 ==> 1 node_59 --> node_56 21 (JU jugal-quadrate contact) 1 0.200 0 ==> 1 266 (Relative width of pmx) 1 0.222 0 ==> 1 node_56 --> Desmatochelys padillaii 18 (PA pineal foramen) 1 0.333 0 ==> 1 257 (Shape of frontals) 1 0.133 1 ==> 0 node_56 --> Santanachelys gaffneyi 22 (JU medial process) 2 0.167 0 ==> 2 57 (QU proc. trochlerais oticum) 1 0.200 2 ==> 1 58 (QU musculatory facet of proc.t.O) 1 0.125 1 ==> 0 68 (PT contribution foram. palat. post.) 1 0.333 1 ==> 0 70 (PT pterygoid-exoccipital) 1 0.333 1 ==> 0 74 (PT medial ridge) 1 0.143 1 ==> 0 100 (IC foramen post. canc. carot. intern.) 1 0.500 1 ==> 2 204 (DR dorsal rib 1 length) 2 1.000 2 ==> 0 246 (ULN contact with radius) 1 0.500 1 ==> 0 249 (MAN paddles) 1 0.667 2 ==> 1 258 (Shape of nasals) 1 0.444 1 --> 3 262 (Orbits position regarding the nares) 1 0.222 1 ==> 0 node_59 --> node_58 257 (Shape of frontals) 1 0.133 1 ==> 2 261 (Maxillary bulge over maxillary sulcus) 1 0.400 0 ==> 1 node_58 --> node_57 259 (Position of maxillary regarding the nares) 1 0.111 0 ==> 1 node_57 --> Rhinochelys elegans 260 (Maxillary ventral surface) 1 0.125 1 ==> 0 node_57 --> GS63_GS67 258 (Shape of nasals) 1 0.444 1 --> 2 node_58 --> Rhinochelys cantabrigiensis 258 (Shape of nasals) 1 0.444 1 --> 0 265 (Concavity of the anterior (external) surface of the premaxilla) 1 0.143 0 ==> 1 266 (Relative width of pmx) 1 0.222 0 ==> 2 node_61 --> Desmatochelys lowi 18 (PA pineal foramen) 1 0.333 0 ==> 1 21 (JU jugal-quadrate contact) 1 0.200 0 ==> 1 35 (PM foramen prepalatinum) 1 0.250 1 ==> 0 86 (BS rostrum basisphenoidale) 1 0.333 1 ==> 0 123 (NU posteriomedial fontanelles) 1 0.400 0 ==> 1 node_62 --> Chelosphargis advena 4 (PF medial contact) 1 0.667 0 --> 1 110 (DE width triturating surface) 1 0.143 0 ==> 1 137 (SUP number of suprapygals) 1 0.500 0 ==> 1 261 (Maxillary bulge over maxillary sulcus) 1 0.400 0 ==> 1 node_64 --> Calcarichelys gemma 72 (PT proc. pteryg. externus) 2 0.182 1 ==> 3 81 (BO deep C-shaped) 1 0.125 0 --> 1 90 (BS dorsum sellae) 1 0.200 0 ==> 1 266 (Relative width of pmx) 1 0.222 0 ==> 1 node_64 --> Syllomus aegyptiacus 80 (BO anterior morphology) 1 0.333 1 ==> 0 112 (DE lingual ridge) 1 0.250 1 ==> 0 117 (CA+PLA sculpturing of surface) 1 1.000 0 ==> 1 135 (CO costal 9 abs/pres) 1 1.000 1 --> (01) 237 (HUM lateral process) 1 0.750 2 ==> 3 239 (HUM lateral process shape) 1 0.250 0 ==> 1 259 (Position of maxillary regarding the nares) 1 0.111 0 ==> 1 node_73 --> node_71 13 (PA parieta-squamosal contact) 1 0.286 1 ==> 0 40 (PL secondary palate) 1 0.250 0 ==> 1 41 (PL palatine-vomer contact) 1 0.500 0 --> 1 50 (VO vomerine pillar) 2 0.400 0 ==> 2 51 (VO upper triturating surface) 1 0.250 0 ==> 1 81 (BO deep C-shaped) 1 0.125 0 --> 1 90 (BS dorsum sellae) 1 0.200 0 --> 1 91 (BS foramen carotic laterale) 1 0.333 0 --> 1 110 (DE width triturating surface) 1 0.143 0 --> 1 111 (DE symphyseal ridge) 1 0.455 1 --> 0 133 (CO rib free peripherals) 1 0.600 0 ==> 1 207 (DV dorsal vert. articulation) 1 0.500 0 --> 1 256 (TIB tibial pit) 1 0.333 0 --> 1 257 (Shape of frontals) 1 0.133 1 ==> 2 264 (Dorsal exposure of nasal cavity) 1 0.100 0 ==> 1 node_71 --> node_70 10 (FR orbit contribution) 1 0.105 2 --> 1 22 (JU medial process) 2 0.167 0 ==> 2 39 (PL contribution upp. triturating surf) 1 0.143 0 ==> 1 140 (PY pygal notch) 1 0.167 1 ==> 0 262 (Orbits position regarding the nares) 1 0.222 1 ==> 0 265 (Concavity of the anterior (external) surface of the premaxilla) 1 0.143 0 ==> 1 266 (Relative width of pmx) 1 0.222 0 ==> 2 node_70 --> Argillochelys africana 10 (FR orbit contribution) 1 0.105 1 ==> 0 260 (Maxillary ventral surface) 1 0.125 0 ==> 1 261 (Maxillary bulge over maxillary sulcus) 1 0.400 0 ==> 1 node_70 --> Argillochelys cuneiceps 22 (JU medial process) 2 0.167 2 ==> 0 207 (DV dorsal vert. articulation) 1 0.500 1 --> 0 257 (Shape of frontals) 1 0.133 2 ==> 1 node_70 --> node_67 8 (PF cranial scutes) 1 0.500 0 ==> 1 55 (QU antrum postoticum) 1 0.333 2 ==> 1 113 (DE dentary-surangular arrangement) 1 0.250 0 ==> 1 116 (CA parallel keels) 1 0.333 0 --> 3 120 (NU nuchal articulation with neural) 1 0.250 1 ==> 2 126 (NE number of neurals) 1 0.333 1 ==> 2 140 (PY pygal notch) 1 0.167 0 ==> 1 239 (HUM lateral process shape) 1 0.250 0 ==> 1 244 (HUM scar for muscle latissimus) 1 0.500 0 ==> 1 256 (TIB tibial pit) 1 0.333 1 ==> 0 257 (Shape of frontals) 1 0.133 2 ==> 1 259 (Position of maxillary regarding the nares) 1 0.111 0 ==> 1 266 (Relative width of pmx) 1 0.222 2 ==> 0 node_67 --> node_66 57 (QU proc. trochlerais oticum) 1 0.200 1 ==> 2 58 (QU musculatory facet of proc.t.O) 1 0.125 0 ==> 1 128 (PE number of peripherals) 1 1.000 1 --> 0 133 (CO rib free peripherals) 1 0.600 1 ==> 2 147 (PLR extrapleurals) 1 1.000 0 ==> 1 177 (IN intergular absence/presence) 1 1.000 1 ==> 0 219 (SCA internal angle) 1 0.500 1 ==> 0 255 (FEM femoral trochanters) 1 1.000 1 ==> 2 260 (Maxillary ventral surface) 1 0.125 0 ==> 1 node_66 --> node_65 262 (Orbits position regarding the nares) 1 0.222 0 ==> 1 node_65 --> Caretta caretta 10 (FR orbit contribution) 1 0.105 1 ==> 0 47 (VO vo-premaxila contact) 2 1.000 0 ==> 2 113 (DE dentary-surangular arrangement) 1 0.250 1 ==> 0 126 (NE number of neurals) 1 0.333 2 ==> 1 132 (CO distal rib end) 1 0.500 2 ==> 3 138 (SUP sup1 vs sup2) 1 1.000 1 ==> 0 177 (IN intergular absence/presence) 1 1.000 0 --> (01) 179 (HU humero-pectoral sulcus) 1 1.000 0 --> (01) 257 (Shape of frontals) 1 0.133 1 ==> 2 259 (Position of maxillary regarding the nares) 1 0.111 1 ==> 0 node_65 --> Lepidochelys kempii 111 (DE symphyseal ridge) 1 0.455 0 --> (01) 116 (CA parallel keels) 1 0.333 3 --> 0 128 (PE number of peripherals) 1 1.000 0 --> (01) 179 (HU humero-pectoral sulcus) 1 1.000 0 --> (01) node_66 --> Lepidochelys olivacea 111 (DE symphyseal ridge) 1 0.455 0 --> (01) 116 (CA parallel keels) 1 0.333 3 --> (03) 128 (PE number of peripherals) 1 1.000 0 --> (01) 179 (HU humero-pectoral sulcus) 1 1.000 0 --> (01) node_67 --> Chelonia mydas 37 (PM medial premax. hook) 1 1.000 0 ==> 1 42 (MX triturating surface definition) 1 0.333 1 ==> 2 74 (PT medial ridge) 1 0.143 1 ==> 0 101 (PAr palatine artery) 1 0.333 1 ==> 2 110 (DE width triturating surface) 1 0.143 1 ==> 0 111 (DE symphyseal ridge) 2 0.455 0 ==> 2 112 (DE lingual ridge) 1 0.250 1 ==> 0 123 (NU posteriomedial fontanelles) 1 0.400 0 --> (01) 132 (CO distal rib end) 1 0.500 2 ==> 3 179 (HU humero-pectoral sulcus) 1 1.000 0 --> (01) 202 (CEV cervical 8 ventral process) 1 1.000 0 --> (01) 265 (Concavity of the anterior (external) surface of the premaxilla) 1 0.143 1 ==> 0 node_70 --> node_68 50 (VO vomerine pillar) 1 0.400 2 ==> 1 266 (Relative width of pmx) 1 0.222 2 --> 0 node_68 --> Eochelone brabantica 39 (PL contribution upp. triturating surf) 1 0.143 1 ==> 0 40 (PL secondary palate) 1 0.250 1 ==> 0 42 (MX triturating surface definition) 1 0.333 1 ==> 0 51 (VO upper triturating surface) 1 0.250 1 ==> 0 90 (BS dorsum sellae) 1 0.200 1 ==> 0 node_70 --> Erquelinnesia gosseleti 12 (FR direction orbits) 1 0.143 0 ==> 1 22 (JU medial process) 2 0.167 2 ==> 0 34 (PM fusion pm) 1 0.333 0 ==> 1 39 (PL contribution upp. triturating surf) 1 0.143 1 ==> 0 57 (QU proc. trochlerais oticum) 1 0.200 1 ==> 2 58 (QU musculatory facet of proc.t.O) 1 0.125 0 ==> 1 72 (PT proc. pteryg. externus) 2 0.182 1 ==> 3 74 (PT medial ridge) 1 0.143 1 ==> 0 110 (DE width triturating surface) 1 0.143 1 ==> 0 123 (NU posteriomedial fontanelles) 1 0.400 0 ==> 1 257 (Shape of frontals) 1 0.133 2 ==> 1 264 (Dorsal exposure of nasal cavity) 1 0.100 1 ==> 0 node_70 --> Euclastes acutirostris 10 (FR orbit contribution) 1 0.105 1 ==> 0 12 (FR direction orbits) 1 0.143 0 ==> 1 57 (QU proc. trochlerais oticum) 1 0.200 1 ==> 2 58 (QU musculatory facet of proc.t.O) 1 0.125 0 ==> 1 262 (Orbits position regarding the nares) 1 0.222 0 ==> 1 263 (Skull height) 1 0.125 0 ==> 1 node_70 --> Euclastes platyops 1 (NA, presence/absence) 1 0.250 1 ==> 0 10 (FR orbit contribution) 1 0.105 1 ==> 0 264 (Dorsal exposure of nasal cavity) 1 0.100 1 ==> 0 node_70 --> Euclastes wielandi 10 (FR orbit contribution) 1 0.105 1 --> 2 12 (FR direction orbits) 1 0.143 0 ==> 1 57 (QU proc. trochlerais oticum) 1 0.200 1 ==> 2 58 (QU musculatory facet of proc.t.O) 1 0.125 0 ==> 1 264 (Dorsal exposure of nasal cavity) 1 0.100 1 ==> 0 node_70 --> Itilochelys rasstrigin 10 (FR orbit contribution) 1 0.105 1 --> 2 74 (PT medial ridge) 1 0.143 1 ==> 0 81 (BO deep C-shaped) 1 0.125 1 ==> 0 261 (Maxillary bulge over maxillary sulcus) 1 0.400 0 ==> 1 node_70 --> Mexichelys coahuilaensis 10 (FR orbit contribution) 1 0.105 1 --> 2 12 (FR direction orbits) 1 0.143 0 ==> 1 22 (JU medial process) 1 0.167 2 ==> 1 81 (BO deep C-shaped) 1 0.125 1 ==> 0 88 (BS ventral surface shape) 1 0.200 1 ==> 0 90 (BS dorsum sellae) 1 0.200 1 ==> 0 91 (BS foramen carotic laterale) 1 0.333 1 ==> 0 121 (NU costiform process) 1 1.000 0 ==> 1 140 (PY pygal notch) 1 0.167 0 ==> 1 153 (PLA hyo-hypo contact and shape) 1 0.667 1 ==> 3 256 (TIB tibial pit) 1 0.333 1 ==> 0 266 (Relative width of pmx) 1 0.222 2 ==> 0 node_70 --> Natator depressus 10 (FR orbit contribution) 1 0.105 1 ==> 0 55 (QU antrum postoticum) 1 0.333 2 ==> 1 110 (DE width triturating surface) 1 0.143 1 ==> 0 113 (DE dentary-surangular arrangement) 1 0.250 0 ==> 1 120 (NU nuchal articulation with neural) 1 0.250 1 ==> 2 133 (CO rib free peripherals) 1 0.600 1 ==> 2 179 (HU humero-pectoral sulcus) 1 1.000 0 --> (01) 239 (HUM lateral process shape) 1 0.250 0 ==> 1 node_70 --> Puppigerus camperi 10 (FR orbit contribution) 1 0.105 1 --> 2 72 (PT proc. pteryg. externus) 2 0.182 1 ==> 3 111 (DE symphyseal ridge) 1 0.455 0 ==> 1 140 (PY pygal notch) 1 0.167 0 ==> 1 260 (Maxillary ventral surface) 1 0.125 0 ==> 1 263 (Skull height) 1 0.125 0 ==> 1 264 (Dorsal exposure of nasal cavity) 1 0.100 1 ==> 0 node_70 --> node_69 57 (QU proc. trochlerais oticum) 1 0.200 1 ==> 2 58 (QU musculatory facet of proc.t.O) 1 0.125 0 ==> 1 111 (DE symphyseal ridge) 1 0.455 0 ==> 1 133 (CO rib free peripherals) 1 0.600 1 --> 0 257 (Shape of frontals) 1 0.133 2 --> 1 node_69 --> Tasbacka aldabergeni 13 (PA parieta-squamosal contact) 1 0.286 0 ==> 1 18 (PA pineal foramen) 1 0.333 0 ==> 1 80 (BO anterior morphology) 1 0.333 1 ==> 0 node_70 --> Terlinguachelys fischbecki 110 (DE width triturating surface) 1 0.143 1 ==> 0 112 (DE lingual ridge) 1 0.250 1 ==> 0 217 (SCA glenoid neck) 1 1.000 0 ==> 1 251 (ULNR ulnare vs intermedium) 1 0.667 1 ==> 0 node_71 --> Ashleychelys palmeri 30 (SQ sq-qudrate contact) 1 0.167 1 ==> 0 142 (VE shape of vertebrals) 1 0.333 1 ==> 0 259 (Position of maxillary regarding the nares) 1 0.111 0 ==> 1 263 (Skull height) 1 0.125 0 ==> 1 node_73 --> Carolinochelys wilsoni 10 (FR orbit contribution) 1 0.105 2 ==> 1 13 (PA parieta-squamosal contact) 1 0.286 1 ==> 0 30 (SQ sq-qudrate contact) 1 0.167 1 ==> 0 51 (VO upper triturating surface) 1 0.250 0 ==> 1 64 (PT pt-basioccipital) 1 1.000 1 ==> 0 196 (CEV cervicals 6 and 7 double) 1 1.000 0 ==> 1 259 (Position of maxillary regarding the nares) 1 0.111 0 ==> 1 262 (Orbits position regarding the nares) 1 0.222 1 ==> 0 node_73 --> Corsochelys haliniches 88 (BS ventral surface shape) 1 0.200 1 ==> 0 220 (COR coracoid vs humerus lenght) 1 0.500 1 ==> 0 257 (Shape of frontals) 1 0.133 1 ==> 2 node_73 --> node_72 6 (PR pref-palatine contact) 1 1.000 0 --> 1 10 (FR orbit contribution) 1 0.105 2 --> 0 13 (PA parieta-squamosal contact) 1 0.286 1 --> 0 14 (PA foramen nervi trigemini) 1 1.000 1 --> 0 19 (JU jugal-squamosal contact) 1 1.000 1 --> 0 21 (JU jugal-quadrate contact) 1 0.200 0 --> 1 35 (PM foramen prepalatinum) 1 0.250 1 --> 0 42 (MX triturating surface definition) 1 0.333 1 --> 0 55 (QU antrum postoticum) 1 0.333 2 --> 1 60 (EPt absence/presence) 1 1.000 1 --> 2 67 (PT medial contact) 1 0.500 0 --> 1 69 (PT vertical flange) 1 0.500 1 --> 0 70 (PT pterygoid-exoccipital) 1 0.333 1 --> 0 72 (PT proc. pteryg. externus) 2 0.182 1 --> 3 74 (PT medial ridge) 1 0.143 1 --> 0 88 (BS ventral surface shape) 1 0.200 1 --> 0 92 (BS foramen ant. can. car. int) 1 1.000 1 --> 0 100 (IC foramen post. canc. carot. intern.) 1 0.500 1 --> 2 101 (PAr palatine artery) 1 0.333 1 --> 2 113 (DE dentary-surangular arrangement) 1 0.250 0 ==> 1 115 (CA carapacial scutes) 1 0.333 0 ==> 1 120 (NU nuchal articulation with neural) 1 0.250 1 ==> 2 137 (SUP number of suprapygals) 1 0.500 1 --> 0 170 (PLAS plastral scutes) 1 0.333 0 ==> 1 199 (CEV heigth vs lenght) 1 1.000 1 ==> 0 224 (PEL thryoid fenestra) 1 1.000 0 ==> 1 239 (HUM lateral process shape) 1 0.250 0 ==> 1 242 (HUM anterior projection lateral proc.) 1 1.000 0 ==> 1 246 (ULN contact with radius) 1 0.500 1 ==> 0 251 (ULNR ulnare vs intermedium) 1 0.667 1 --> 2 259 (Position of maxillary regarding the nares) 1 0.111 0 --> 1 260 (Maxillary ventral surface) 1 0.125 0 --> 1 264 (Dorsal exposure of nasal cavity) 1 0.100 0 --> 1 265 (Concavity of the anterior (external) surface of the premaxilla) 1 0.143 0 --> 1 node_72 --> Dermochelys coriacea 111 (DE symphyseal ridge) 1 0.455 1 ==> 0 115 (CA carapacial scutes) 1 0.333 1 ==> 2 128 (PE number of peripherals) 2 1.000 1 ==> 3 153 (PLA hyo-hypo contact and shape) 1 0.667 1 ==> 4 154 (EN absence/presence) 1 1.000 0 ==> 1 237 (HUM lateral process) 1 0.750 2 ==> 3 node_72 --> Mesodermochelys undulatus 8 (PF cranial scutes) 1 0.500 0 ==> 1 111 (DE symphyseal ridge) 1 0.455 1 ==> 2 112 (DE lingual ridge) 1 0.250 1 ==> 0 188 (CEV cervicals 8 vs 7) 1 1.000 1 ==> 0 197 (CEV cervicals 6 and 7 central) 1 0.500 1 ==> 0 198 (CEV cervicals 7 and 8 double) 1 0.333 1 ==> 0 203 (CEV cervicals 7 and 8 shape art.) 1 0.500 1 ==> 0 node_73 --> Nichollsemys bareri 7 (PF dorsal exposure) 1 0.500 0 ==> 1 12 (FR direction orbits) 1 0.143 0 ==> 1 20 (JU participation upp. temp. emargination) 1 1.000 0 ==> 1 22 (JU medial process) 1 0.167 0 ==> 1 66 (PT foramen palat. post.) 2 0.250 2 ==> 0 75 (PT posterolateral extension) 1 0.500 0 ==> 1 81 (BO deep C-shaped) 1 0.125 0 --> 1 257 (Shape of frontals) 1 0.133 1 ==> 2 node_73 --> Procolpochelys grandaeva 10 (FR orbit contribution) 1 0.105 2 ==> 1 13 (PA parieta-squamosal contact) 1 0.286 1 ==> 0 30 (SQ sq-qudrate contact) 1 0.167 1 ==> 0 50 (VO vomerine pillar) 1 0.400 0 ==> 1 51 (VO upper triturating surface) 1 0.250 0 ==> 1 81 (BO deep C-shaped) 1 0.125 0 --> 1 259 (Position of maxillary regarding the nares) 1 0.111 0 ==> 1 264 (Dorsal exposure of nasal cavity) 1 0.100 0 ==> 1 node_74 --> Toxochelys latiremis 39 (PL contribution upp. triturating surf) 1 0.143 0 ==> 1 41 (PL palatine-vomer contact) 1 0.500 0 ==> 1 50 (VO vomerine pillar) 1 0.400 0 ==> 1 111 (DE symphyseal ridge) 1 0.455 1 --> (01) 120 (NU nuchal articulation with neural) 1 0.250 1 --> 2 123 (NU posteriomedial fontanelles) 1 0.400 0 --> 1 150 (PLA posterior plastral fontanella) 1 0.667 1 --> (01) 183 (AN anal vs xiphiplastron) 1 1.000 0 ==> 1 233 (ISC metischial process) 1 1.000 0 --> 1 258 (Shape of nasals) 1 0.444 0 ==> 3 263 (Skull height) 1 0.125 0 ==> 1 266 (Relative width of pmx) 1 0.222 0 ==> 1 paup> Log start;