Oligonucleotide sequences used in this study,,,
,Name,Sequence,Components
Illumina MiSeq 16S V1-V2 Amplification and Sequencing Primers,Forward PCR amplification primer,5'-AATGATACGGCGACCACCGAGATCTACAC-XXXXXXXXXXXX-TATGGTAATT-GT-AGAGTTTGATCCTGGCTCAG-3',"5' Illumina adapter, 12-base Golay barcode (X's), forward pad*, linker**, 27F forward primer"
,Reverse PCR amplification primer,5'-CAAGCAGAAGACGGCATACGAGAT-XXXXXXXXXXXX-AGTCAGTCAG-CC-TGCTGCCTCCCGTAGGAGT-3',"Reverse complement of 3' Illumina adapter, 12-base Golay barcode (X's), reverse pad, linker, 338R reverse primer"
,Forward sequencing primer,5'-TATGGTAATT-GT-AGAGTTTGATCCTGGCTCAG-3',"Forward pad, linker, 27F forward primer"
,Reverse sequencing primer,5'-AGTCAGTCAG-CC-TGCTGCCTCCCGTAGGAGT-3',"Reverse pad, linker, 338R reverse primer"
Illumina MiSeq ITS1F and ITS2 Amplification and Sequencing Primers,Forward PCR amplification primer,5'-AATGATACGGCGACCACCGAGATCTACAC-XXXXXXXXXXXX-TGCGGCCTGC-GT-CTTGGTCATTTAGAGGAAGTAA-3',"5' Illumina adapter, 12-base Golay barcode (X's), forward pad*, linker**, ITS1F primer"
,Reverse PCR amplification primer,5'-CAAGCAGAAGACGGCATACGAGAT-XXXXXXXXXXXX-AGTCAGTCAG-CC-GCTGCGTTCTTCATCGATGC-3',"Reverse complement of 3' Illumina adapter, 12-base Golay barcode (X's), reverse pad, linker, ITS2 primer"
,Forward sequencing primer,5'-TGCGGCCTGC-GT-CTTGGTCATTTAGAGGAAGTAA-3',"Forward pad, linker, ITS1F primer"
,Reverse sequencing primer,5'-AGTCAGTCAG-CC-GCTGCGTTCTTCATCGATGC-3',"Reverse pad, linker, ITS2 priemr"