>consensus
GCACTGAGATGGCGACCGGCGCACGGGTGAGTAACACGTATCCTACCTGCCGATAACTCCGGAATAGCCTTTCGAAAGAAAGATTAATACCGGATGGTATACGAATATCGCATGATATTTTTATTAAAGAATTTCGGTTWTCCGATGGGGAATRKGCKTYCCATTAGTTTGTTGGCCSGGGGTAACSGSCCMCMMMSAMRACRATSGACGGAATWAGKGKTTCTGGARAAGGAAGGTYCCCCMCACATTKGRAACTGAGACACGGTTCCAAAYTCCTTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAACCAGCCCAAGTAGCGTGAAGGATGAAGGCTCTATGGGTCGTAAACTTCTTTTATATGGGAATAAAGTTTTCCACGTGTGGAATTTTGTATGTACCATATGAATAAGGATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGTGGATTGTTAAGTCAGTTGTGAWAGYTTGCGGCTCRWCCGTAAAATTGCAGTTGARACTGGCAGTCTTGAGTACAGTAGAGGYGGGCGGAATTCGTGGKGTAGCGRTGAAATGCTTAGATATCACGAAGAWCTCCGATTGCGAAGGCAGCTCACTAGACTGTYACTGACACTGATGCTCGAAAGTGTGSGWATCAAACAGGAWTASATACCCTGGYAGTCCACWCAGYAAACGATGGAWTACTCGCTGTTTGCGATATWCAGTAAGCGGCCAAGCGAAAGCATTAAGTATTCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTAAATTGCAACAGAATATATTGGAAACAGTATAGCCGTAAGGCTGTTGTGAAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCTTATCTTTAGTTACTAACAGGTTATGCTGAGGACTCTAGAGAGACTGCCGTCGTAAGATGTGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGGGGTACAGAAGGCGGCTACCTGGTGACAGGATGCTAATCCCAAAAACCTCTCTCAGTTCGGATCGAAGTCTGCAACCCGACTTCGTGAAGCTGGATTCGCTAGTAATCGCGCATCA
>alignment
GCACTGAGATGGCGACCGGCGCACGGGTGAGTAACACGTATCCTACCTGCCGATAACTCCGGAATAGCCTTTCGAAAGAAAGATTAATACCGGATGGTATACGAATATCGCATGATATTTTTATTAAAGAATTTCGGTTAT-CGATGGGG---ATGCGTTCCATTAGTTTGTTGG--CGGGGTAACGGCCCACCAAGACAACGATGGA------TAGTGGTTCTG--AAAGGAAGGTCCCCCACA---TTGGAACTGAGACACGG-TCCAAACTCC-TACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAACCAGCC-AAGTAGCGTGAAGGATGAAGGCTCTATGGGTCGTAAACTTCTTTTATATGGGAATAAAGTTTTCCACGTGTGGAATTTTGTATGTACCATATGAATAAGGATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGTGGATTGTTAAGTCAGTTGTGATAGCTTGCGGCTCGTCCGTAAAATTGCAGTTGAGACTGGCAGTCTTGAGTACAGTAGAGGCGGGCGGAATTCGTGGGGTAGCGATGAAATGCTTAGATATCACGAAGATCTCCGATTGCGAAGGCAGCTCACTAGACTGTCACTGACACTGATGCTCGAAAGTGTGCGAATCAA-CAGGAATACATACCCTGGCAGTCCACTCAGCAAACGATGGATTACTCGCTGTTTGCGATATTCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTCGGTTTTCCGATGGGGAATGGGCTTCCCATTAGTTTGTTGGCCGGGGGTAACCGGCCCCACCCAAGACAATCGACGGAATAAGGGTTTCTGGAGAAGGAAGGTTCCCCCCACATTGGAAACTGAGACACGGTTCCAAATTCCTTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAACCAGCCCAAGTAGCGTGAAGGATGAAGGCTCTATGGGTCGTAAACTTCTTTTATATGGGAATAAAGTTTTCCACGTGTGGAATTTTGTATGTACCATATGAATAAGGATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGTGGATTGTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGAAACTGGCAGTCTTGAGTACAGTAGAGGTGGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACTCCGATTGCGAAGGCAGCTCACTAGACTGTTACTGACACTGATGCTCGAAAGTGTGGGTATCAAACAGGATTAGATACCCTGGTAGTCCACACAGTAAACGAT-GAATACTCGCTGTTTGCGATATACAGTAAGCGGCCAAGCGAAAGCATTAAGTATTCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTAAATTGCAACAGAATATATTGGAAACAGTATAGCCGTAAGGCTGTTGTGAAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCTTATCTTTAGTTACTAACAGGTTATGCTGAGGACTCTAGAGAGACTGCCGTCGTAAGATGTGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGGGGTACAGAAGGCGGCTACCTGGTGACAGGATGCTAATCCCAAAAACCTCTCTCAGTTCGGATCGAAGTCTGCAACCCGACTTCGTGAAGCTGGATTCGCTAGTAATCGCGCATCAGCACTGAGATGGCGACCGGCGCACGGGTGAGTAACACGTATCCTACCTGCCGATAACTCCGGAATAGCCTTTCGAAAGAAAGATTAATACCGGATGGTATACGAATATCGCATGATATTTTTATTAAAGAATTTCGGTTWTCCGATGGGGAATRKGCKTYCCATTAGTTTGTTGGCCSGGGGTAACSGSCCMCMMMSAMRACRATSGACGGAATWAGKGKTTCTGGARAAGGAAGGTYCCCCMCACATTKGRAACTGAGACACGGTTCCAAAYTCCTTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAACCAGCCCAAGTAGCGTGAAGGATGAAGGCTCTATGGGTCGTAAACTTCTTTTATATGGGAATAAAGTTTTCCACGTGTGGAATTTTGTATGTACCATATGAATAAGGATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGTGGATTGTTAAGTCAGTTGTGAWAGYTTGCGGCTCRWCCGTAAAATTGCAGTTGARACTGGCAGTCTTGAGTACAGTAGAGGYGGGCGGAATTCGTGGKGTAGCGRTGAAATGCTTAGATATCACGAAGAWCTCCGATTGCGAAGGCAGCTCACTAGACTGTYACTGACACTGATGCTCGAAAGTGTGSGWATCAAACAGGAWTASATACCCTGGYAGTCCACWCAGYAAACGATGGAWTACTCGCTGTTTGCGATATWCAGTAAGCGGCCAAGCGAAAGCATTAAGTATTCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTAAATTGCAACAGAATATATTGGAAACAGTATAGCCGTAAGGCTGTTGTGAAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCTTATCTTTAGTTACTAACAGGTTATGCTGAGGACTCTAGAGAGACTGCCGTCGTAAGATGTGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGGGGTACAGAAGGCGGCTACCTGGTGACAGGATGCTAATCCCAAAAACCTCTCTCAGTTCGGATCGAAGTCTGCAACCCGACTTCGTGAAGCTGGATTCGCTAGTAATCGCGCATCA
>differences
1:2c(45, 45)c(0, 0)
>distance.matrix
00.07544042767887650.07544042767887650
>dendrogram
21
>indels


>stop.codons


>secondary.peak.columns


