# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: HLH.hmm # target sequence database: SME_r2.5.1_pep.fa # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: HLH [M=53] Accession: PF00010.26 Description: Helix-loop-helix DNA-binding domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.4e-15 57.3 2.0 1.1e-14 56.3 2.0 1.4 1 Sme2.5_07791.1_g00001.1 4.1e-14 54.5 2.3 1e-13 53.2 2.3 1.7 1 Sme2.5_02490.1_g00003.1 4.2e-14 54.4 2.6 9.6e-14 53.3 2.6 1.6 1 Sme2.5_07421.1_g00001.1 1.1e-13 53.1 2.1 2.2e-13 52.1 2.1 1.5 1 Sme2.5_00036.1_g00016.1 1.6e-13 52.5 3.4 2.9e-13 51.7 3.4 1.4 1 Sme2.5_00029.1_g00003.1 3.2e-13 51.6 0.8 5.4e-13 50.8 0.8 1.4 1 Sme2.5_04359.1_g00004.1 3.5e-13 51.4 2.3 6.7e-13 50.6 2.3 1.4 1 Sme2.5_02242.1_g00002.1 4.7e-13 51.0 3.0 2.9e-12 48.5 1.6 2.3 2 Sme2.5_00407.1_g00004.1 1e-12 50.0 1.0 2.1e-12 48.9 1.0 1.6 1 Sme2.5_07550.1_g00004.1 1.3e-12 49.7 0.9 2.3e-12 48.8 0.9 1.5 1 Sme2.5_03826.1_g00003.1 3.7e-12 48.2 0.1 8.1e-12 47.1 0.1 1.6 1 Sme2.5_00592.1_g00005.1 9.4e-12 46.9 0.1 2.4e-11 45.6 0.1 1.7 1 Sme2.5_07215.1_g00003.1 9.6e-12 46.9 3.1 9.6e-12 46.9 3.1 2.1 1 Sme2.5_00190.1_g00012.1 9.8e-12 46.8 1.0 9.8e-12 46.8 1.0 2.3 1 Sme2.5_06460.1_g00003.1 1.1e-11 46.7 0.7 1.8e-11 45.9 0.7 1.4 1 Sme2.5_00407.1_g00003.1 1.3e-11 46.5 3.1 3.7e-11 45.0 3.1 1.9 1 Sme2.5_01171.1_g00003.1 1.6e-11 46.2 0.1 3.6e-11 45.0 0.1 1.7 1 Sme2.5_11653.1_g00001.1 2.6e-11 45.5 0.1 8e-11 43.9 0.1 1.8 1 Sme2.5_03511.1_g00006.1 4.3e-11 44.8 0.1 4.3e-11 44.8 0.1 2.2 1 Sme2.5_00192.1_g00002.1 5.5e-11 44.4 0.2 1e-10 43.6 0.2 1.5 1 Sme2.5_00411.1_g00009.1 7.8e-11 43.9 0.2 1.8e-10 42.8 0.2 1.6 1 Sme2.5_02073.1_g00002.1 8e-11 43.9 1.8 1.7e-10 42.9 1.8 1.5 1 Sme2.5_01944.1_g00011.1 8.1e-11 43.9 3.5 1.6e-10 42.9 0.6 2.4 2 Sme2.5_10149.1_g00003.1 8.2e-11 43.9 1.1 1.5e-10 43.0 1.1 1.5 1 Sme2.5_00186.1_g00004.1 1.1e-10 43.4 0.0 2.5e-10 42.3 0.0 1.6 1 Sme2.5_02266.1_g00009.1 1.1e-10 43.4 0.0 1.1e-10 43.4 0.0 2.4 1 Sme2.5_00341.1_g00013.1 1.5e-10 43.0 0.6 1.5e-10 43.0 0.6 1.9 1 Sme2.5_00502.1_g00009.1 1.5e-10 43.0 0.4 5.8e-10 41.2 0.1 2.1 1 Sme2.5_00047.1_g00028.1 1.6e-10 43.0 0.1 3.5e-10 41.9 0.1 1.6 1 Sme2.5_00130.1_g00003.1 1.6e-10 42.9 2.1 2.8e-10 42.2 2.1 1.4 1 Sme2.5_04004.1_g00006.1 2e-10 42.6 0.2 2e-10 42.6 0.2 1.8 1 Sme2.5_00114.1_g00007.1 2e-10 42.6 0.1 4.1e-10 41.6 0.1 1.5 1 Sme2.5_00014.1_g00019.1 2.1e-10 42.6 0.1 4.9e-10 41.4 0.1 1.6 1 Sme2.5_01795.1_g00002.1 2.1e-10 42.5 0.5 5.1e-10 41.3 0.5 1.7 1 Sme2.5_01725.1_g00004.1 2.3e-10 42.5 2.1 5.1e-10 41.3 2.1 1.6 1 Sme2.5_02282.1_g00013.1 2.5e-10 42.3 0.0 2.5e-10 42.3 0.0 1.8 1 Sme2.5_01011.1_g00006.1 2.6e-10 42.3 0.1 6e-10 41.1 0.1 1.6 1 Sme2.5_02104.1_g00004.1 2.7e-10 42.2 1.4 6e-10 41.1 1.4 1.7 1 Sme2.5_03403.1_g00001.1 3.9e-10 41.7 0.3 9.3e-10 40.5 0.3 1.6 1 Sme2.5_12406.1_g00003.1 4.1e-10 41.6 1.8 4.1e-10 41.6 1.8 1.7 1 Sme2.5_12132.1_g00002.1 4.6e-10 41.5 1.7 6.8e-10 40.9 0.4 2.0 1 Sme2.5_00057.1_g00016.1 4.7e-10 41.5 0.9 4.7e-10 41.5 0.9 2.2 1 Sme2.5_00407.1_g00002.1 5.4e-10 41.3 0.2 1.5e-08 36.7 0.2 2.3 2 Sme2.5_03671.1_g00002.1 /TE 6e-10 41.1 0.0 2.1e-09 39.4 0.0 2.0 1 Sme2.5_04514.1_g00004.1 /TE 6.2e-10 41.1 0.1 1.2e-09 40.1 0.1 1.5 1 Sme2.5_01725.1_g00003.1 6.9e-10 40.9 2.7 8.3e-10 40.6 0.1 2.1 2 Sme2.5_06605.1_g00003.1 8.5e-10 40.6 2.0 1.6e-09 39.7 0.3 2.1 2 Sme2.5_06129.1_g00005.1 1e-09 40.4 0.4 2e-09 39.4 0.4 1.4 1 Sme2.5_00622.1_g00011.1 1.4e-09 39.9 1.4 2.6e-09 39.1 1.4 1.5 1 Sme2.5_15542.1_g00001.1 2.1e-09 39.4 0.5 3.8e-09 38.5 0.5 1.4 1 Sme2.5_11931.1_g00001.1 /TE/partial 2.9e-09 38.9 1.2 5.5e-09 38.0 1.2 1.5 1 Sme2.5_13712.1_g00001.1 3.1e-09 38.8 0.4 6.1e-09 37.9 0.4 1.5 1 Sme2.5_13527.1_g00001.1 4.1e-09 38.4 1.8 1.2e-08 37.0 1.8 1.8 1 Sme2.5_06398.1_g00001.1 4.4e-09 38.3 3.7 9.1e-09 37.3 3.7 1.6 1 Sme2.5_00735.1_g00008.1 6e-09 37.9 0.1 1.2e-08 36.9 0.1 1.5 1 Sme2.5_00114.1_g00006.1 6.7e-09 37.8 2.1 1.5e-08 36.6 2.1 1.5 1 Sme2.5_00008.1_g00032.1 9.9e-09 37.2 0.3 2e-08 36.2 0.3 1.5 1 Sme2.5_03213.1_g00002.1 1e-08 37.1 0.0 1e-08 37.1 0.0 2.3 1 Sme2.5_05426.1_g00001.1 1.2e-08 36.9 0.1 3.3e-08 35.5 0.1 1.7 1 Sme2.5_01286.1_g00009.1 1.3e-08 36.9 5.3 3.1e-08 35.6 5.3 1.7 1 Sme2.5_00169.1_g00018.1 1.6e-08 36.6 0.0 1.6e-08 36.6 0.0 1.9 1 Sme2.5_04383.1_g00001.1 1.8e-08 36.4 0.4 4.3e-08 35.2 0.4 1.7 1 Sme2.5_00563.1_g00003.1 2.1e-08 36.1 2.0 2.1e-08 36.1 2.0 1.7 1 Sme2.5_09905.1_g00002.1 /TE 2.1e-08 36.1 0.1 3.6e-08 35.4 0.1 1.3 1 Sme2.5_09616.1_g00001.1 2.2e-08 36.1 2.8 2.3e-08 36.0 0.2 2.1 1 Sme2.5_05447.1_g00007.1 2.2e-08 36.1 1.4 4.4e-08 35.1 1.4 1.5 1 Sme2.5_02737.1_g00005.1 2.5e-08 35.9 0.3 5.2e-08 34.9 0.3 1.5 1 Sme2.5_00417.1_g00014.1 2.9e-08 35.7 0.3 5.4e-08 34.9 0.3 1.4 1 Sme2.5_00179.1_g00023.1 3e-08 35.7 0.0 9.4e-08 34.1 0.0 1.9 1 Sme2.5_00697.1_g00011.1 /TE 3.9e-08 35.3 0.0 8.5e-08 34.2 0.0 1.6 1 Sme2.5_02756.1_g00007.1 4.6e-08 35.1 0.1 8.4e-08 34.2 0.1 1.4 1 Sme2.5_05369.1_g00003.1 5.7e-08 34.8 0.1 5.7e-08 34.8 0.1 1.7 1 Sme2.5_02585.1_g00003.1 6.7e-08 34.5 0.1 1.5e-07 33.4 0.1 1.7 1 Sme2.5_00595.1_g00014.1 /pseudo 8.5e-08 34.2 2.0 1.9e-07 33.1 2.0 1.6 1 Sme2.5_03973.1_g00005.1 9.5e-08 34.1 0.0 1.8e-07 33.1 0.0 1.5 1 Sme2.5_13814.1_g00002.1 1e-07 34.0 0.1 2e-07 33.0 0.1 1.6 1 Sme2.5_00186.1_g00003.1 1.3e-07 33.7 1.2 3.6e-07 32.2 1.2 1.8 1 Sme2.5_12177.1_g00001.1 1.9e-07 33.1 0.0 7.1e-07 31.3 0.0 2.0 1 Sme2.5_00236.1_g00020.1 2.1e-07 33.0 0.3 4.1e-07 32.0 0.3 1.5 1 Sme2.5_03271.1_g00005.1 2.1e-07 32.9 0.3 4.1e-07 32.0 0.3 1.5 1 Sme2.5_01347.1_g00008.1 3.8e-07 32.1 2.5 0.0099 18.0 0.0 2.6 2 Sme2.5_00537.1_g00003.1 4.8e-07 31.8 0.5 1.3e-06 30.4 0.2 1.8 1 Sme2.5_00386.1_g00001.1 /TE 5.7e-07 31.6 0.1 1.1e-06 30.7 0.1 1.5 1 Sme2.5_06337.1_g00004.1 7.6e-07 31.2 0.3 2.3e-06 29.6 0.0 1.9 1 Sme2.5_03422.1_g00002.1 9e-07 30.9 0.1 1.6e-06 30.2 0.1 1.4 1 Sme2.5_05639.1_g00001.1 /partial 9.4e-07 30.9 0.1 1.6e-06 30.1 0.1 1.4 1 Sme2.5_11033.1_g00001.1 9.8e-07 30.8 0.4 1.5e-06 30.2 0.4 1.3 1 Sme2.5_04079.1_g00005.1 1.1e-06 30.7 0.3 2e-06 29.8 0.3 1.5 1 Sme2.5_05926.1_g00003.1 /pseudo 1.4e-06 30.3 0.0 3.7e-06 29.0 0.0 1.7 1 Sme2.5_06479.1_g00003.1 1.7e-06 30.1 0.5 3.6e-06 29.0 0.1 1.7 1 Sme2.5_09326.1_g00003.1 1.8e-06 30.0 0.0 4.5e-06 28.7 0.0 1.7 1 Sme2.5_01734.1_g00001.1 2e-06 29.8 0.0 4.1e-06 28.8 0.0 1.5 1 Sme2.5_01649.1_g00012.1 2.1e-06 29.8 0.2 4.7e-06 28.6 0.2 1.6 1 Sme2.5_01618.1_g00007.1 2.2e-06 29.7 0.0 6.1e-06 28.3 0.0 1.7 1 Sme2.5_00066.1_g00020.1 3.2e-06 29.2 1.3 3.2e-06 29.2 1.3 2.0 1 Sme2.5_02187.1_g00009.1 3.7e-06 29.0 0.1 9.4e-06 27.7 0.1 1.7 1 Sme2.5_01583.1_g00014.1 4e-06 28.9 0.1 8e-06 27.9 0.1 1.5 1 Sme2.5_00081.1_g00022.1 4.3e-06 28.8 1.4 1.1e-05 27.5 1.4 1.7 1 Sme2.5_00544.1_g00012.1 5.1e-06 28.5 0.1 1.3e-05 27.2 0.1 1.6 1 Sme2.5_00622.1_g00009.1 5.2e-06 28.5 0.1 1.5e-05 27.0 0.1 1.8 1 Sme2.5_01764.1_g00004.1 5.8e-06 28.3 0.1 1.1e-05 27.4 0.1 1.5 1 Sme2.5_01185.1_g00002.1 /pseudo 8.1e-06 27.9 0.0 2.3e-05 26.4 0.0 1.8 1 Sme2.5_01808.1_g00003.1 1.3e-05 27.2 0.0 3.1e-05 26.0 0.0 1.6 1 Sme2.5_00326.1_g00007.1 1.6e-05 26.9 2.9 3e-05 26.0 2.9 1.5 1 Sme2.5_03973.1_g00006.1 3e-05 26.1 1.0 8.2e-05 24.7 0.0 2.3 1 Sme2.5_00925.1_g00014.1 4.3e-05 25.6 0.6 9.5e-05 24.5 0.6 1.6 1 Sme2.5_00240.1_g00009.1 6.4e-05 25.0 0.2 0.00046 22.3 0.0 2.1 2 Sme2.5_05101.1_g00002.1 6.4e-05 25.0 0.1 0.00015 23.8 0.1 1.6 1 Sme2.5_01232.1_g00025.1 8.4e-05 24.6 0.1 0.00015 23.8 0.1 1.4 1 Sme2.5_06123.1_g00003.1 8.5e-05 24.6 0.0 0.0002 23.4 0.0 1.6 1 Sme2.5_00835.1_g00003.1 0.00012 24.1 0.5 0.00089 21.3 0.3 2.0 2 Sme2.5_09229.1_g00001.1 /TE 0.00028 23.0 0.0 0.00047 22.2 0.0 1.4 1 Sme2.5_01047.1_g00014.1 0.00083 21.4 3.0 0.00083 21.4 3.0 2.0 1 Sme2.5_01135.1_g00009.1 0.0014 20.7 0.3 0.0029 19.7 0.3 1.5 1 Sme2.5_06085.1_g00003.1 0.0024 20.0 0.0 0.0038 19.3 0.0 1.3 1 Sme2.5_04102.1_g00014.1 0.0047 19.0 0.7 0.016 17.3 0.6 1.9 1 Sme2.5_06668.1_g00002.1 ------ inclusion threshold ------ 0.012 17.8 0.1 0.02 17.0 0.1 1.3 1 Sme2.5_04864.1_g00002.1 /TE 0.015 17.4 0.0 0.029 16.5 0.0 1.5 1 Sme2.5_10236.1_g00005.1 0.018 17.1 0.4 0.21 13.7 0.1 2.3 2 Sme2.5_07700.1_g00001.1 0.02 17.0 0.2 0.08 15.1 0.2 2.1 1 Sme2.5_05849.1_g00001.1 0.036 16.2 0.0 0.068 15.3 0.0 1.5 1 Sme2.5_04783.1_g00003.1 0.039 16.1 0.0 0.07 15.3 0.0 1.4 1 Sme2.5_02990.1_g00001.1 0.079 15.1 0.2 0.15 14.3 0.2 1.4 1 Sme2.5_05033.1_g00003.1 0.17 14.1 4.4 0.28 13.3 4.4 1.4 1 Sme2.5_00475.1_g00013.1 0.19 13.9 0.0 0.37 13.0 0.0 1.4 1 Sme2.5_03374.1_g00001.1 0.43 12.8 0.1 0.69 12.1 0.1 1.4 1 Sme2.5_15381.1_g00001.1 Domain annotation for each sequence (and alignments): >> Sme2.5_07791.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 56.3 2.0 1.6e-17 1.1e-14 4 53 .] 333 379 .. 331 379 .. 0.97 Alignments for each domain: == domain 1 score: 56.3 bits; conditional E-value: 1.6e-17 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 hn+ ErrRRdriN++++ L+ellP +s+K +Ka++L +A+eY+k+Lq Sme2.5_07791.1_g00001.1 333 VHNLSERRRRDRINEKMKALQELLP---HSTKTDKASMLDEAIEYLKSLQ 379 6************************...9********************9 PP >> Sme2.5_02490.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 53.2 2.3 1.5e-16 1e-13 2 53 .] 188 236 .. 187 236 .. 0.97 Alignments for each domain: == domain 1 score: 53.2 bits; conditional E-value: 1.5e-16 HHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 2 raahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 aahn+ ErrRRd+iN +++ L++l+P + +K +Ka++Le++++Y+k+Lq Sme2.5_02490.1_g00003.1 188 AAAHNQSERRRRDKINGKMKALQKLVP---NASKTDKASMLEEVIKYLKQLQ 236 589************************...99*******************9 PP >> Sme2.5_07421.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 53.3 2.6 1.4e-16 9.6e-14 4 53 .] 360 406 .. 358 406 .. 0.97 Alignments for each domain: == domain 1 score: 53.3 bits; conditional E-value: 1.4e-16 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 hn+ ErrRRdriN++++ L+el+P + K +Ka++L +A+eY+k+Lq Sme2.5_07421.1_g00001.1 360 VHNLSERRRRDRINEKMKALQELIP---RCNKTDKASMLDEAIEYLKSLQ 406 6************************...9********************9 PP >> Sme2.5_00036.1_g00016.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 52.1 2.1 3.3e-16 2.2e-13 4 53 .] 202 248 .. 200 248 .. 0.97 Alignments for each domain: == domain 1 score: 52.1 bits; conditional E-value: 3.3e-16 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 hn+ ErrRRdriN++++ L++l+P + K +Ka++L ++++Y+k+Lq Sme2.5_00036.1_g00016.1 202 VHNQSERRRRDRINQRMKALQRLVP---NANKTDKASMLDEVIDYLKQLQ 248 6************************...999******************9 PP >> Sme2.5_00029.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 51.7 3.4 4.3e-16 2.9e-13 3 53 .] 147 194 .. 145 194 .. 0.97 Alignments for each domain: == domain 1 score: 51.7 bits; conditional E-value: 4.3e-16 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 + hn+ E+rRR riN++++ L++l+P + K +Ka++L +A+eY+k+Lq Sme2.5_00029.1_g00003.1 147 QVHNLSEKRRRSRINEKMKALQKLIP---NANKTDKASMLDEAIEYLKQLQ 194 57************************...999******************9 PP >> Sme2.5_04359.1_g00004.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 50.8 0.8 8e-16 5.4e-13 2 53 .] 46 95 .. 45 95 .. 0.98 Alignments for each domain: == domain 1 score: 50.8 bits; conditional E-value: 8e-16 HHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 2 raahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 r++h+ E+rRR +iN++++ Lr+l+P +++K + a+ L ++++Y+++Lq Sme2.5_04359.1_g00004.1 46 RSKHSVTEQRRRSKINERFQILRDLIP--HTDQKRDTASFLLEVIQYVQYLQ 95 899************************..7*********************9 PP >> Sme2.5_02242.1_g00002.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 50.6 2.3 9.9e-16 6.7e-13 4 53 .] 451 497 .. 449 497 .. 0.97 Alignments for each domain: == domain 1 score: 50.6 bits; conditional E-value: 9.9e-16 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 hn+ ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+k Lq Sme2.5_02242.1_g00002.1 451 VHNLSERRRRDRINEKMRALQELIP---NCNKADKASMLDEAIEYLKTLQ 497 6************************...9********************9 PP >> Sme2.5_00407.1_g00004.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 48.5 1.6 4.2e-15 2.9e-12 4 53 .] 177 223 .. 174 223 .. 0.95 2 ? 1.4 0.0 2.2 1.5e+03 42 50 .. 326 334 .. 324 336 .. 0.89 Alignments for each domain: == domain 1 score: 48.5 bits; conditional E-value: 4.2e-15 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 h ++Er+RR+r+ + + +L +l+P + kKl+Ka+iLe A++YIk+L+ Sme2.5_00407.1_g00004.1 177 DHVLAERKRRERLTQYFITLSTLIP---NLKKLDKASILEDAIKYIKQLE 223 6899*********************...9*******************96 PP == domain 2 score: 1.4 bits; conditional E-value: 2.2 HHHHHHHHH CS HLH 42 LekAveYIk 50 L +++eYIk Sme2.5_00407.1_g00004.1 326 LNMTTEYIK 334 89******9 PP >> Sme2.5_07550.1_g00004.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 48.9 1.0 3.2e-15 2.1e-12 3 53 .] 63 110 .. 61 110 .. 0.96 Alignments for each domain: == domain 1 score: 48.9 bits; conditional E-value: 3.2e-15 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ++h+++E+rRRdriN l++Lr+l+P +s+K++Ka L+ +ve++k+L+ Sme2.5_07550.1_g00004.1 63 RSHSQAEKRRRDRINAQLSTLRKLIP---SSEKMDKAGLLRSVVEHVKDLK 110 68************************...9******************995 PP >> Sme2.5_03826.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 48.8 0.9 3.5e-15 2.3e-12 2 53 .] 46 95 .. 45 95 .. 0.98 Alignments for each domain: == domain 1 score: 48.8 bits; conditional E-value: 3.5e-15 HHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 2 raahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 r++h+ E+rRR +iN++++ Lr l+P ++++K + a+ L+++++Y+++Lq Sme2.5_03826.1_g00003.1 46 RSKHSVTEQRRRSKINERFQMLRNLIP--NTDQKRDTASFLTEVIQYVQYLQ 95 899************************..8*********************9 PP >> Sme2.5_00592.1_g00005.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 47.1 0.1 1.2e-14 8.1e-12 4 53 .] 482 528 .. 480 528 .. 0.96 Alignments for each domain: == domain 1 score: 47.1 bits; conditional E-value: 1.2e-14 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h ++ErrRR+++N+++ Lr+l+P +K++Ka+iL ++eY+k+L+ Sme2.5_00592.1_g00005.1 482 NHVLAERRRREKLNERFIILRSLVP---FVTKMDKASILGDTIEYVKQLR 528 7999*********************...9*******************95 PP >> Sme2.5_07215.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.6 0.1 3.6e-14 2.4e-11 7 53 .] 366 409 .. 361 409 .. 0.94 Alignments for each domain: == domain 1 score: 45.6 bits; conditional E-value: 3.6e-14 HHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 Er+RR+ri+++l+ Lr l+P + +K++K++iL Av+YI++Lq Sme2.5_07215.1_g00003.1 366 VTERKRRNRIKDGLFALRALVP---NISKMDKVAILGDAVDYINELQ 409 57********************...9********************9 PP >> Sme2.5_00190.1_g00012.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 46.9 3.1 1.4e-14 9.6e-12 3 53 .] 104 151 .. 102 151 .. 0.96 Alignments for each domain: == domain 1 score: 46.9 bits; conditional E-value: 1.4e-14 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ++h+e+ErrRR+riN+ l++Lr+llP + +K +Ka+ L ++++++k+L+ Sme2.5_00190.1_g00012.1 104 KSHSEAERRRRERINNHLAKLRSLLP---NTTKTDKASLLAEVIQHVKELK 151 68************************...9******************995 PP >> Sme2.5_06460.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 46.8 1.0 1.4e-14 9.8e-12 3 53 .] 46 93 .. 44 93 .. 0.96 Alignments for each domain: == domain 1 score: 46.8 bits; conditional E-value: 1.4e-14 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ++h+e+E+rRRdriN l++Lr+l+P + +K++Ka+ L +v+++k+L+ Sme2.5_06460.1_g00003.1 46 RSHSEAEKRRRDRINAQLSTLRKLIP---TCEKMDKATLLASVVNHVKDLK 93 68************************...9******************995 PP >> Sme2.5_00407.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.9 0.7 2.7e-14 1.8e-11 3 53 .] 111 158 .. 109 158 .. 0.95 Alignments for each domain: == domain 1 score: 45.9 bits; conditional E-value: 2.7e-14 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 + h ++Er+RR+r+ +++ L +l+P + kKl+Ka++L A++YIk+L+ Sme2.5_00407.1_g00003.1 111 QDHVMAERKRRERLTQRFIALSTLIP---NLKKLDKATVLGDAIKYIKQLE 158 56999*********************...9*******************96 PP >> Sme2.5_01171.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.0 3.1 5.5e-14 3.7e-11 3 53 .] 64 111 .. 62 111 .. 0.96 Alignments for each domain: == domain 1 score: 45.0 bits; conditional E-value: 5.5e-14 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ++h+e+ErrRR+riN+ l +Lr+llP + +K +Ka+ L ++++++k+L+ Sme2.5_01171.1_g00003.1 64 KSHSEAERRRRERINNHLTKLRSLLP---NTTKTDKASLLAEVIQHVKELK 111 68************************...9******************995 PP >> Sme2.5_11653.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.0 0.1 5.4e-14 3.6e-11 3 52 .. 282 328 .. 280 329 .. 0.95 Alignments for each domain: == domain 1 score: 45.0 bits; conditional E-value: 5.4e-14 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++h + ErrRR+++N++++ Lr+llP p++K +Ka++L ++eY+ +L Sme2.5_11653.1_g00001.1 282 VHHMISERRRREKLNDSFQLLRSLLP---PGTKKDKASVLACTTEYLASL 328 579999********************...******************998 PP >> Sme2.5_03511.1_g00006.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 43.9 0.1 1.2e-13 8e-11 4 52 .. 286 331 .. 284 332 .. 0.96 Alignments for each domain: == domain 1 score: 43.9 bits; conditional E-value: 1.2e-13 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 +h e+Er+RR+++N+++ Lr+ +P + +K++Ka+ L Av YI++L Sme2.5_03511.1_g00006.1 286 NHVEAERQRREKLNHRFYALRSVVP---HVTKMDKASLLSDAVAYINEL 331 799**********************...9******************99 PP >> Sme2.5_00192.1_g00002.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 44.8 0.1 6.3e-14 4.3e-11 1 53 [] 129 180 .. 129 180 .. 0.97 Alignments for each domain: == domain 1 score: 44.8 bits; conditional E-value: 6.3e-14 HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 1 rraahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +r +h ++Er+RR+++N+ l+ Lr+l+P + ++ + a+i+ A++Y+k+L+ Sme2.5_00192.1_g00002.1 129 QRITHIAVERNRRKQMNDYLSILRSLMP-QSFVQRGDQASIVSGAINYVKELE 180 699*************************.9********************995 PP >> Sme2.5_00411.1_g00009.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 43.6 0.2 1.5e-13 1e-10 3 53 .] 95 142 .. 93 142 .. 0.95 Alignments for each domain: == domain 1 score: 43.6 bits; conditional E-value: 1.5e-13 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ++h + Er+RR++++++++ Lr+llP p++K +K+++L ++eY+++L+ Sme2.5_00411.1_g00009.1 95 VHHMISERKRREKLRESFQHLRSLLP---PGTKKDKSSVLASTTEYLSSLK 142 579999********************...*******************995 PP >> Sme2.5_02073.1_g00002.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.8 0.2 2.6e-13 1.8e-10 4 53 .] 266 312 .. 264 312 .. 0.96 Alignments for each domain: == domain 1 score: 42.8 bits; conditional E-value: 2.6e-13 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h e+Er+RR+++N+++ Lr+ +P + ++++Ka+ L Av YI++L+ Sme2.5_02073.1_g00002.1 266 NHVEAERQRREKLNHRFYALRSVVP---NVSRMDKASLLSDAVSYINQLK 312 799**********************...9*******************95 PP >> Sme2.5_01944.1_g00011.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.9 1.8 2.4e-13 1.7e-10 6 53 .] 37 81 .. 33 81 .. 0.93 Alignments for each domain: == domain 1 score: 42.9 bits; conditional E-value: 2.4e-13 HHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 + Er+RR+++N++l+ Lr +P + +K++Ka+i + A+eYI +L+ Sme2.5_01944.1_g00011.1 37 IMSERNRRKKLNERLFALRAVVP---NISKMDKASIIKDAIEYIEELH 81 578********************...9*****************9985 PP >> Sme2.5_10149.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.9 0.6 2.4e-13 1.6e-10 4 52 .. 247 292 .. 245 293 .. 0.96 2 ? 0.8 0.1 3.4 2.3e+03 12 21 .. 339 348 .. 338 348 .. 0.90 Alignments for each domain: == domain 1 score: 42.9 bits; conditional E-value: 2.4e-13 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 +h e+Er+RR+++N+++ Lr+ +P + +K++Ka+ L Av YI++L Sme2.5_10149.1_g00003.1 247 NHVEAERQRREKLNNRFYALRSVVP---NVSKMDKASLLANAVTYINEL 292 899**********************...9******************99 PP == domain 2 score: 0.8 bits; conditional E-value: 3.4 HHHHHHHHHH CS HLH 12 RRdriNsale 21 R++riNs+++ Sme2.5_10149.1_g00003.1 339 RVNRINSSFA 348 9*******96 PP >> Sme2.5_00186.1_g00004.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 43.0 1.1 2.3e-13 1.5e-10 1 53 [] 73 125 .. 73 125 .. 0.97 Alignments for each domain: == domain 1 score: 43.0 bits; conditional E-value: 2.3e-13 HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 1 rraahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ++ +hn+ Er RR++iN ++ Lr+llP++++ kKls +++ + +YI +Lq Sme2.5_00186.1_g00004.1 73 KKLNHNASERDRRKKINGLYSSLRSLLPASEHTKKLSIPSTVSRMLKYIPELQ 125 6899**********************************************998 PP >> Sme2.5_02266.1_g00009.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.3 0.0 3.7e-13 2.5e-10 2 53 .] 100 150 .. 99 150 .. 0.97 Alignments for each domain: == domain 1 score: 42.3 bits; conditional E-value: 3.7e-13 HHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 2 raahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 r +h +Er+RR+++N+ l+ Lr+l+P + k+ + a+i +v+YI++Lq Sme2.5_02266.1_g00009.1 100 RISHITVERNRRKQMNEHLSVLRTLMP-CFYAKRGDQASIIGGVVDYINELQ 150 899************************.7**********************9 PP >> Sme2.5_00341.1_g00013.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 43.4 0.0 1.7e-13 1.1e-10 1 53 [] 65 116 .. 65 116 .. 0.97 Alignments for each domain: == domain 1 score: 43.4 bits; conditional E-value: 1.7e-13 HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 1 rraahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +r++h e+Er+RR+++N+ l+ Lr+l+P + ++ + a+i+ A+e++k+L+ Sme2.5_00341.1_g00013.1 65 QRMTHIEVERNRRKQMNQHLHVLRSLMP-TSYVQRGDQASIVGGAIEFVKELE 116 79**************************.79*******************995 PP >> Sme2.5_00502.1_g00009.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 43.0 0.6 2.2e-13 1.5e-10 4 52 .. 63 108 .. 61 109 .. 0.96 Alignments for each domain: == domain 1 score: 43.0 bits; conditional E-value: 2.2e-13 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 +h+e+ErrRR+riN l +Lr ++P K++Ka+ L k++ +Ik+L Sme2.5_00502.1_g00009.1 63 NHSEAERRRRERINGHLGTLRNIIP---GTNKMDKAALLAKVIGHIKEL 108 8************************...789****************99 PP >> Sme2.5_00047.1_g00028.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.2 0.1 8.6e-13 5.8e-10 4 53 .] 467 513 .. 465 513 .. 0.97 Alignments for each domain: == domain 1 score: 41.2 bits; conditional E-value: 8.6e-13 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h e+Er+RR+++N+++ Lr +P + +K++Ka+ L A+ YI +Lq Sme2.5_00047.1_g00028.1 467 NHVEAERQRREKLNQRFYALRAVVP---NISKMDKASLLGDAIAYITELQ 513 799**********************...9*******************98 PP >> Sme2.5_00130.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.9 0.1 5.1e-13 3.5e-10 5 52 .. 274 318 .. 272 319 .. 0.96 Alignments for each domain: == domain 1 score: 41.9 bits; conditional E-value: 5.1e-13 HHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 h e+Er+RR+++N+++ Lr+ +P + +K++Ka+ L Av YI++L Sme2.5_00130.1_g00003.1 274 HVEAERKRREKLNHRFYALRSVVP---YVSKMNKASLLGDAVTYINEL 318 889*********************...*******************99 PP >> Sme2.5_04004.1_g00006.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.2 2.1 4.1e-13 2.8e-10 3 52 .. 25 71 .. 23 72 .. 0.95 Alignments for each domain: == domain 1 score: 42.2 bits; conditional E-value: 4.1e-13 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++h+e+ErrRR+riN l++Lr llP + K +Ka+ L +Av+ +++L Sme2.5_04004.1_g00006.1 25 KSHSEAERRRRKRINGHLATLRNLLP---NTIKTDKASLLAEAVRCVREL 71 68************************...888*************99998 PP >> Sme2.5_00114.1_g00007.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.6 0.2 2.9e-13 2e-10 2 52 .. 163 210 .. 162 211 .. 0.95 Alignments for each domain: == domain 1 score: 42.6 bits; conditional E-value: 2.9e-13 HHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 2 raahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++h + Er+RR ++N++++ Lr ++P +++K++ a+i++ ++YI++L Sme2.5_00114.1_g00007.1 163 ETKHFATERQRRVHLNDKFQALRNMVP---NPSKNDRASIVKDGIDYINEL 210 689************************...99*****************99 PP >> Sme2.5_00014.1_g00019.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.6 0.1 6.1e-13 4.1e-10 4 53 .] 331 377 .. 329 377 .. 0.97 Alignments for each domain: == domain 1 score: 41.6 bits; conditional E-value: 6.1e-13 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h e+Er+RR+++N+++ Lr +P + +K++Ka+ L A+ YI +Lq Sme2.5_00014.1_g00019.1 331 NHVEAERQRREKLNQRFYALRAVVP---NISKMDKASLLGDAIAYITDLQ 377 799**********************...9*******************98 PP >> Sme2.5_01795.1_g00002.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.4 0.1 7.2e-13 4.9e-10 4 52 .. 497 542 .. 495 543 .. 0.96 Alignments for each domain: == domain 1 score: 41.4 bits; conditional E-value: 7.2e-13 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 +h e+Er+RR+++N+++ Lr +P + +K++Ka+ L A+ YI++L Sme2.5_01795.1_g00002.1 497 NHVEAERQRREKLNQRFYALRAVVP---NVSKMDKASLLGDAISYINEL 542 799**********************...9******************99 PP >> Sme2.5_01725.1_g00004.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.3 0.5 7.5e-13 5.1e-10 3 53 .] 86 133 .. 84 133 .. 0.95 Alignments for each domain: == domain 1 score: 41.3 bits; conditional E-value: 7.5e-13 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 + h ++Er+RR+r + + L + +P + kKl+Ka+iLe A++YI +Lq Sme2.5_01725.1_g00004.1 86 QDHLMAERKRRERFSQLFVLLAKSIP---QIKKLDKATILEDAIKYIGELQ 133 56899*********************...9*******************98 PP >> Sme2.5_02282.1_g00013.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.3 2.1 7.6e-13 5.1e-10 4 53 .] 31 78 .. 28 78 .. 0.92 Alignments for each domain: == domain 1 score: 41.3 bits; conditional E-value: 7.6e-13 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ++ + Er+RR+++N++l+ Lr +P + kK++ a+i + A++YI +L+ Sme2.5_02282.1_g00013.1 31 KNIMSERNRRKKLNERLFALRAVVP--NITKKMDRASIIKDAIDYIEELH 78 55678********************..8******************9985 PP >> Sme2.5_01011.1_g00006.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.3 0.0 3.7e-13 2.5e-10 1 53 [] 95 146 .. 95 146 .. 0.97 Alignments for each domain: == domain 1 score: 42.3 bits; conditional E-value: 3.7e-13 HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 1 rraahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +r++h ++Er+RR+++N+ l+ Lr+l+P + ++ + a+i+ A++++k+L+ Sme2.5_01011.1_g00006.1 95 QRMTHIAVERNRRRQMNDYLAVLRSLMP-PSYAQRGDQASIVGGAINFVKELE 146 79**************************.9********************995 PP >> Sme2.5_02104.1_g00004.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.1 0.1 8.8e-13 6e-10 4 52 .. 461 506 .. 459 507 .. 0.96 Alignments for each domain: == domain 1 score: 41.1 bits; conditional E-value: 8.8e-13 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 +h e+Er+RR+++N+++ Lr +P + +K++Ka+ L A+ YI++L Sme2.5_02104.1_g00004.1 461 NHVEAERQRREKLNQRFYALRAVVP---NVSKMDKASLLGDAIAYINDL 506 799**********************...9******************98 PP >> Sme2.5_03403.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.1 1.4 8.9e-13 6e-10 6 52 .. 160 203 .. 155 204 .. 0.93 Alignments for each domain: == domain 1 score: 41.1 bits; conditional E-value: 8.9e-13 HHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++ErrRR+r+N++l+ Lr+++P + +K++ +iL A++Y+k+L Sme2.5_03403.1_g00001.1 160 LMAERRRRKRLNDRLSMLRSIVP---KISKMDRTSILGDAIDYMKEL 203 579********************...99*****************98 PP >> Sme2.5_12406.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 40.5 0.3 1.4e-12 9.3e-10 8 53 .] 474 516 .. 471 516 .. 0.96 Alignments for each domain: == domain 1 score: 40.5 bits; conditional E-value: 1.4e-12 HHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ErrRR++iN+++ L ++lP +++K++K++ L +++e++k+L+ Sme2.5_12406.1_g00003.1 474 SERRRREKINERFMHLASILP---TGSKVDKISLLDETIEHMKELE 516 6********************...9******************995 PP >> Sme2.5_12132.1_g00002.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.6 1.8 6.1e-13 4.1e-10 4 52 .. 51 96 .. 49 97 .. 0.94 Alignments for each domain: == domain 1 score: 41.6 bits; conditional E-value: 6.1e-13 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 +h+e+ErrRR+riN l++Lr l+P +s K++Ka+ L k+v +k+L Sme2.5_12132.1_g00002.1 51 SHSEAERRRRQRINAHLSTLRNLVP---SSDKMEKAALLAKVVYQVKQL 96 8************************...9************99888877 PP >> Sme2.5_00057.1_g00016.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 40.9 0.4 1e-12 6.8e-10 3 53 .] 164 211 .. 162 211 .. 0.96 Alignments for each domain: == domain 1 score: 40.9 bits; conditional E-value: 1e-12 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 + h ++Er+RR+++ +++ L l+P kK++Ka++L A++Y+k+Lq Sme2.5_00057.1_g00016.1 164 QDHIIAERKRREKLSQRFIALSALIP---GLKKMDKASVLGDAIKYLKQLQ 211 56999*********************...89*******************9 PP >> Sme2.5_00407.1_g00002.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.5 0.9 6.9e-13 4.7e-10 3 52 .. 128 174 .. 126 175 .. 0.95 Alignments for each domain: == domain 1 score: 41.5 bits; conditional E-value: 6.9e-13 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++h ++Er+RR+++ +++ L +lP kK++Ka+iLe+A++++++L Sme2.5_00407.1_g00002.1 128 QHHIIAERKRREKLSQKFVALSAILP---GLKKVDKASILEQAIKHVQEL 174 789***********************...89*****************99 PP >> Sme2.5_03671.1_g00002.1 /TE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.0 0.0 1.5 1e+03 37 48 .. 111 122 .. 109 124 .. 0.92 2 ! 36.7 0.2 2.2e-11 1.5e-08 6 53 .] 340 385 .. 336 385 .. 0.95 Alignments for each domain: == domain 1 score: 2.0 bits; conditional E-value: 1.5 THHHHHHHHHHH CS HLH 37 sKaeiLekAveY 48 +K+e+L++++++ Sme2.5_03671.1_g00002.1 111 NKSETLQQTTDH 122 8********997 PP == domain 2 score: 36.7 bits; conditional E-value: 2.2e-11 HHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +++Er RR ri +++ +L+el+P + +k + a++L Av+YIk+L+ Sme2.5_03671.1_g00002.1 340 SIAERVRRTRISDRMRKLQELVP--NMDKQTNTADMLDFAVDYIKELE 385 789********************..8*******************996 PP >> Sme2.5_04514.1_g00004.1 /TE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 39.4 0.0 3.1e-12 2.1e-09 1 53 [] 166 217 .. 166 217 .. 0.97 Alignments for each domain: == domain 1 score: 39.4 bits; conditional E-value: 3.1e-12 HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 1 rraahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +r++h ++Er+RR+++N+ l Lr+l+P + + ++ + a+i A+e++++L+ Sme2.5_04514.1_g00004.1 166 QRMTHIAVERNRRKQMNEHLRVLRSLMP-GSYVQRGDQASIIGGAIEFVRELE 217 79**************************.9********************995 PP >> Sme2.5_01725.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 40.1 0.1 1.8e-12 1.2e-09 3 53 .] 110 157 .. 108 157 .. 0.95 Alignments for each domain: == domain 1 score: 40.1 bits; conditional E-value: 1.8e-12 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 + h ++Er+RR+++ + + L +++P kKl+K++iL ++eY+k+Lq Sme2.5_01725.1_g00003.1 110 QDHVIAERKRREKLGDLFISLSKIVP---GLKKLDKSSILGDTIEYMKELQ 157 56999*********************...89*******************9 PP >> Sme2.5_06605.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 40.6 0.1 1.2e-12 8.3e-10 4 52 .. 73 120 .. 71 121 .. 0.92 2 ? -0.2 0.5 7.2 4.9e+03 14 29 .. 125 147 .. 124 164 .. 0.65 Alignments for each domain: == domain 1 score: 40.6 bits; conditional E-value: 1.2e-12 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++ rE+ RRd++N++++eL ++l ++++K++K+ iL Av+ + +L Sme2.5_06605.1_g00003.1 73 SKAHREKMRRDKLNDRFQELSSILE-PGKQPKMDKSVILGDAVRMVVQL 120 5789*********************.9****************987666 PP == domain 2 score: -0.2 bits; conditional E-value: 7.2 HHHHHHHHHHHHCST.......C CS HLH 14 driNsaleeLrellP.......s 29 ++++++++ L+e + Sme2.5_06605.1_g00003.1 125 QKLKESYNNLQEKVIelkaeknE 147 57899999999997745444441 PP >> Sme2.5_06129.1_g00005.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -0.3 0.1 7.5 5.1e+03 22 36 .. 176 190 .. 173 192 .. 0.75 2 ! 39.7 0.3 2.4e-12 1.6e-09 10 53 .] 248 288 .. 244 288 .. 0.98 Alignments for each domain: == domain 1 score: -0.3 bits; conditional E-value: 7.5 HHHHCSTCSTTSS-S CS HLH 22 eLrellPslppskKl 36 +L ++P++++s+Kl Sme2.5_06129.1_g00005.1 176 RLHGHVPKNKRSTKL 190 789999977777776 PP == domain 2 score: 39.7 bits; conditional E-value: 2.4e-12 HHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 r+RR+riN++l++L++l+P +++K++ +++Le+Av+Y+k Lq Sme2.5_06129.1_g00005.1 248 RKRRERINDRLKTLQSLIP---NGTKVDISTMLEEAVQYVKFLQ 288 9******************...9********************9 PP >> Sme2.5_00622.1_g00011.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 39.4 0.4 2.9e-12 2e-09 6 53 .] 311 356 .. 307 356 .. 0.96 Alignments for each domain: == domain 1 score: 39.4 bits; conditional E-value: 2.9e-12 HHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +++Er RR ri +++ +L+el+P + +k + a++L +AveYIk Lq Sme2.5_00622.1_g00011.1 311 SIAERVRRTRISERMRKLQELVP--NMDKQTNTADMLDLAVEYIKGLQ 356 789********************..8*********************9 PP >> Sme2.5_15542.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 39.1 1.4 3.8e-12 2.6e-09 6 52 .. 152 195 .. 147 196 .. 0.94 Alignments for each domain: == domain 1 score: 39.1 bits; conditional E-value: 3.8e-12 HHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++ErrRR+r+N++l+ Lr+++P + +K++ +iL +++Y+k+L Sme2.5_15542.1_g00001.1 152 LMAERRRRKRLNDRLSMLRSIVP---KISKMDRTSILGDTIDYVKEL 195 579********************...99*****************98 PP >> Sme2.5_11931.1_g00001.1 /TE/partial # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 38.5 0.5 5.6e-12 3.8e-09 6 53 .] 328 373 .. 324 373 .. 0.96 Alignments for each domain: == domain 1 score: 38.5 bits; conditional E-value: 5.6e-12 HHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +++Er RR ri +++++L+el P + +k + a++L +Av+YIk+Lq Sme2.5_11931.1_g00001.1 328 SIAERMRRTRISERMKKLQELFP--NMDKQTNTADMLDLAVDYIKDLQ 373 789********************..8*********************9 PP >> Sme2.5_13712.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 38.0 1.2 8e-12 5.5e-09 6 52 .. 178 221 .. 173 222 .. 0.94 Alignments for each domain: == domain 1 score: 38.0 bits; conditional E-value: 8e-12 HHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++ErrRR+r+N++l+ Lr+ +P + +K++ +iL +++Y+k+L Sme2.5_13712.1_g00001.1 178 LMAERRRRKRLNDRLSMLRSVVP---KISKMDRTSILGDTIDYMKEL 221 579********************...99*****************98 PP >> Sme2.5_13527.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 37.9 0.4 9e-12 6.1e-09 5 53 .] 269 314 .. 266 314 .. 0.97 Alignments for each domain: == domain 1 score: 37.9 bits; conditional E-value: 9e-12 HHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 h+++Er RR+ri ++++ L+el+P + K +Ka++L + ++Y+k Lq Sme2.5_13527.1_g00001.1 269 HSIAERLRRERIAERMKALQELVP---NANKTDKASMLDEIIDYVKFLQ 314 99**********************...999******************9 PP >> Sme2.5_06398.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 37.0 1.8 1.7e-11 1.2e-08 7 52 .. 318 360 .. 314 361 .. 0.94 Alignments for each domain: == domain 1 score: 37.0 bits; conditional E-value: 1.7e-11 HHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++ErrRR+++N++l Lr+ +P + +K++ a+iL A+eY+k L Sme2.5_06398.1_g00001.1 318 MAERRRRKKLNDRLYMLRSVVP---NISKMDRASILGDAIEYLKNL 360 78********************...9******************87 PP >> Sme2.5_00735.1_g00008.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 37.3 3.7 1.3e-11 9.1e-09 1 53 [] 89 141 .. 89 141 .. 0.97 Alignments for each domain: == domain 1 score: 37.3 bits; conditional E-value: 1.3e-11 HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 1 rraahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ++ +h e+Er+RR+++ + ++ Lr+ lP + + K s ++ +A +YI +Lq Sme2.5_00735.1_g00008.1 89 KKLMHREIERQRRQEMSTLYASLRQKLPLENIKGKRSTSDHILEAANYIEQLQ 141 6889************************999999******************9 PP >> Sme2.5_00114.1_g00006.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 36.9 0.1 1.8e-11 1.2e-08 3 52 .. 200 246 .. 198 247 .. 0.95 Alignments for each domain: == domain 1 score: 36.9 bits; conditional E-value: 1.8e-11 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++h++ E++RR + ++++ Lr+l+P +++K++ a+i A+ YI++L Sme2.5_00114.1_g00006.1 200 VKHPASEKQRRVHFSDKFQALRTLIP---NPSKNERASIIADAIVYINEL 246 68************************...9******************99 PP >> Sme2.5_00008.1_g00032.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 36.6 2.1 2.2e-11 1.5e-08 7 52 .. 340 382 .. 336 383 .. 0.94 Alignments for each domain: == domain 1 score: 36.6 bits; conditional E-value: 2.2e-11 HHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++ErrRR+++N++l Lr+ +P + +K++ a+iL A+eY+k+L Sme2.5_00008.1_g00032.1 340 MAERRRRKKLNDRLYMLRSVVP---RISKMDRASILGDAIEYLKEL 382 78********************...99*****************98 PP >> Sme2.5_03213.1_g00002.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 36.2 0.3 2.9e-11 2e-08 10 53 .] 257 297 .. 253 297 .. 0.98 Alignments for each domain: == domain 1 score: 36.2 bits; conditional E-value: 2.9e-11 HHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 r+RR+riN++l L++l+P +++K++ +++Le+Av+Y+k Lq Sme2.5_03213.1_g00002.1 257 RKRRERINERLRILQSLVP---NGTKVDISTMLEEAVQYVKFLQ 297 9******************...9********************9 PP >> Sme2.5_05426.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 37.1 0.0 1.5e-11 1e-08 1 53 [] 109 160 .. 109 160 .. 0.97 Alignments for each domain: == domain 1 score: 37.1 bits; conditional E-value: 1.5e-11 HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 1 rraahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +r++h ++Er+RR+++N+ l+ Lr+l+ + ++ + a+i+ A+e++k+L+ Sme2.5_05426.1_g00001.1 109 QRMTHIAVERNRRKQMNEHLSVLRSLMS-ESYVQRGDQASIVGGAIEFVKELE 160 79**************************.9********************995 PP >> Sme2.5_01286.1_g00009.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 35.5 0.1 4.8e-11 3.3e-08 8 53 .] 84 127 .. 79 127 .. 0.95 Alignments for each domain: == domain 1 score: 35.5 bits; conditional E-value: 4.8e-11 HHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 Er RR++++s +e L llP + ++K +K++i+ Av +I+ Lq Sme2.5_01286.1_g00009.1 84 TERERRKKMRSLFENLHGLLP--QLPAKADKSTIVDAAVTHIRALQ 127 6********************..7999******************9 PP >> Sme2.5_00169.1_g00018.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 35.6 5.3 4.6e-11 3.1e-08 3 52 .. 524 570 .. 522 571 .. 0.94 Alignments for each domain: == domain 1 score: 35.6 bits; conditional E-value: 4.6e-11 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++h+e+ErrRR+riNs l+ Lr+ll ++K +Ka+ L k+v+ +++L Sme2.5_00169.1_g00018.1 524 KNHKEAERRRRERINSHLHSLRTLLS---CNSKTDKASLLAKVVQRVREL 570 79************************...8**************999888 PP >> Sme2.5_04383.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 36.6 0.0 2.3e-11 1.6e-08 1 53 [] 88 139 .. 88 139 .. 0.97 Alignments for each domain: == domain 1 score: 36.6 bits; conditional E-value: 2.3e-11 HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 1 rraahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +r++h ++Er+RR+++N+ l+ r+l+P + ++ + a+i A++++k+L+ Sme2.5_04383.1_g00001.1 88 QRMTHIAVERNRRKQMNEYLAVIRSLMP-PSYVQRGDQASIIGGAINFVKELE 139 79**************************.9********************995 PP >> Sme2.5_00563.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 35.2 0.4 6.3e-11 4.3e-08 1 52 [. 58 141 .. 58 142 .. 0.97 Alignments for each domain: == domain 1 score: 35.2 bits; conditional E-value: 6.3e-11 HHHHHHHHHHHHHHHHHHHHHHHHHCST................................CSTTSS-STHHHHHHHHHHHHHHH CS HLH 1 rraahnerErrRRdriNsaleeLrellP................................slppskKlsKaeiLekAveYIkhL 52 r++ + rE+ RRdr+N+ + eL + l ++p+ +K++Ka+iL +++ +k+L Sme2.5_00563.1_g00003.1 58 RKVQKADREKLRRDRLNEQFMELGKTLEyhrayqtpeyliqclhtaleqstkdpldqklyADPDRPKNDKASILSDTIQVLKDL 141 6888999****************************************************9999999****************98 PP >> Sme2.5_09905.1_g00002.1 /TE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 36.1 2.0 3.1e-11 2.1e-08 1 53 [] 38 90 .. 38 90 .. 0.96 Alignments for each domain: == domain 1 score: 36.1 bits; conditional E-value: 3.1e-11 HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 1 rraahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 rr h +Er+RR+++ ++ Lr+llP + + K s +e +Av+YIk++q Sme2.5_09905.1_g00002.1 38 RRIIHRDIERQRRQEMSALYSSLRSLLPLRYVKGKRSVSEHMHEAVNYIKEMQ 90 6888************************888899*****************98 PP >> Sme2.5_09616.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 35.4 0.1 5.3e-11 3.6e-08 4 53 .] 145 192 .. 143 192 .. 0.97 Alignments for each domain: == domain 1 score: 35.4 bits; conditional E-value: 5.3e-11 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h+++Er RR++i ++++ L++++P + +k Ka iL + ++YI++Lq Sme2.5_09616.1_g00001.1 145 SHSLAERARREKISERMKVLQDIVP--GCNKVIGKALILDEIINYIQSLQ 192 79***********************..8*********************9 PP >> Sme2.5_05447.1_g00007.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 36.0 0.2 3.4e-11 2.3e-08 10 53 .] 141 181 .. 137 181 .. 0.98 Alignments for each domain: == domain 1 score: 36.0 bits; conditional E-value: 3.4e-11 HHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 r+RR+riN++l L++l+P +++K++ +++Le+Av+Y+k Lq Sme2.5_05447.1_g00007.1 141 RKRRERINERLRILQSLVP---SGTKVDLSTMLEEAVHYVKFLQ 181 9******************...9********************9 PP >> Sme2.5_02737.1_g00005.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 35.1 1.4 6.4e-11 4.4e-08 2 53 .] 60 111 .. 59 111 .. 0.95 Alignments for each domain: == domain 1 score: 35.1 bits; conditional E-value: 6.4e-11 HHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 2 raahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 + h +Er RR+++ + +++L ++lP ++ K s + ++Av+YIkhL+ Sme2.5_02737.1_g00005.1 60 KILHRDVERHRRQNMANLYATLISHLPYESSKGKRSMRDHMQEAVNYIKHLE 111 778************************989999*****************96 PP >> Sme2.5_00417.1_g00014.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.9 0.3 7.6e-11 5.2e-08 10 53 .] 270 310 .. 266 310 .. 0.98 Alignments for each domain: == domain 1 score: 34.9 bits; conditional E-value: 7.6e-11 HHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 rrRR+riN++l L+ l+P +++K++ +++Le+Av Y+k Lq Sme2.5_00417.1_g00014.1 270 RRRRERINERLRILQNLVP---NGTKVDISTMLEEAVTYVKFLQ 310 9******************...9********************9 PP >> Sme2.5_00179.1_g00023.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.9 0.3 7.9e-11 5.4e-08 6 53 .] 295 340 .. 291 340 .. 0.96 Alignments for each domain: == domain 1 score: 34.9 bits; conditional E-value: 7.9e-11 HHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +++Er RR ri +l++L++l+P + +k s a++L +Av++I+ Lq Sme2.5_00179.1_g00023.1 295 SIAERERRTRISGKLKKLQDLVP--NMDKQTSYADMLDLAVQHIRTLQ 340 789********************..8*********************9 PP >> Sme2.5_00697.1_g00011.1 /TE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.1 0.0 1.4e-10 9.4e-08 4 53 .] 431 477 .. 429 477 .. 0.96 Alignments for each domain: == domain 1 score: 34.1 bits; conditional E-value: 1.4e-10 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h e+Er+RR+++N+ + Lr +P + +K++Ka+ L A+ +I ++q Sme2.5_00697.1_g00011.1 431 NHVEAERQRREKLNQLFYALRAVVP---NISKMDKASLLGDAIFHITDMQ 477 799**********************...9*****************9998 PP >> Sme2.5_02756.1_g00007.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.2 0.0 1.3e-10 8.5e-08 10 52 .. 44 83 .. 39 84 .. 0.94 Alignments for each domain: == domain 1 score: 34.2 bits; conditional E-value: 1.3e-10 HHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 r RR+ri ++++ L++l+P ++K++ +++Le+A++Y+k L Sme2.5_02756.1_g00007.1 44 RERRHRISDRFKILQSLVP---GGSKMDTVTMLEEAIQYVKFL 83 99*****************...89*****************98 PP >> Sme2.5_05369.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.2 0.1 1.2e-10 8.4e-08 4 53 .] 173 220 .. 171 220 .. 0.97 Alignments for each domain: == domain 1 score: 34.2 bits; conditional E-value: 1.2e-10 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h+++Er RR++i ++++ L++l+P + +k Ka +L + ++YI++Lq Sme2.5_05369.1_g00003.1 173 SHSLAERARREKISERMKILQDLVP--GCNKVIGKALVLDEIINYIQSLQ 220 79***********************..8*********************9 PP >> Sme2.5_02585.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.8 0.1 8.3e-11 5.7e-08 4 47 .. 76 118 .. 73 119 .. 0.95 Alignments for each domain: == domain 1 score: 34.8 bits; conditional E-value: 8.3e-11 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAve 47 ++ rE+ RR+++N+++ eL ll ++++K +K++iL Ave Sme2.5_02585.1_g00003.1 76 SKACREKLRREKLNDKFMELAALLE-PGRPPKTDKSAILVDAVE 118 7889*********************.9***************98 PP >> Sme2.5_00595.1_g00014.1 /pseudo # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.4 0.1 2.3e-10 1.5e-07 3 53 .] 103 152 .. 101 152 .. 0.93 Alignments for each domain: == domain 1 score: 33.4 bits; conditional E-value: 2.3e-10 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ++ rEr RR+++N++++ L + l +++ K +K +iL A++ +++L+ Sme2.5_00595.1_g00014.1 103 GNKACRERLRREKLNERFSDLSSVLE-PGRPVKTDKMAILGDAIRVLNQLK 152 67899********************9.89999***************9995 PP >> Sme2.5_03973.1_g00005.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.1 2.0 2.8e-10 1.9e-07 1 52 [. 72 123 .. 72 124 .. 0.95 Alignments for each domain: == domain 1 score: 33.1 bits; conditional E-value: 2.8e-10 HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 1 rraahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 +++ ++ +Er+RR+++ + +++Lr l+Ps K s ++ Le+ v+Y+k+L Sme2.5_03973.1_g00005.1 72 KKTVRKDVERQRRRDMAKLYQRLRLLIPSKYLMGKRSISDHLEEIVDYVKDL 123 5788999*********************999999****************99 PP >> Sme2.5_13814.1_g00002.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.1 0.0 2.7e-10 1.8e-07 2 52 .. 72 119 .. 71 120 .. 0.94 Alignments for each domain: == domain 1 score: 33.1 bits; conditional E-value: 2.7e-10 HHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 2 raahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++ h+ + r RR++i +++ L++l+P ++K++ a++L +Av+Y+k L Sme2.5_13814.1_g00002.1 72 KEPHSVAARHRREKISERIRILQRLVP---GGTKMDTASMLDEAVHYVKFL 119 67799999*******************...8******************98 PP >> Sme2.5_00186.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.0 0.1 3e-10 2e-07 1 32 [. 40 70 .. 40 96 .. 0.85 Alignments for each domain: == domain 1 score: 33.0 bits; conditional E-value: 3e-10 HHHHHHHHHHHHHHHHHHHHHHHHHCSTCSTT CS HLH 1 rraahnerErrRRdriNsaleeLrellPslpp 32 ++ +hn+ Er RR++iN ++ Lr+llP + + Sme2.5_00186.1_g00003.1 40 KKLNHNASERDRRKKINGLYSSLRSLLP-ASD 70 6899************************.222 PP >> Sme2.5_12177.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 32.2 1.2 5.3e-10 3.6e-07 7 52 .. 165 207 .. 161 208 .. 0.93 Alignments for each domain: == domain 1 score: 32.2 bits; conditional E-value: 5.3e-10 HHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++ErrRR+r+N +l+ Lr+++P + +K++ +iL +++Y k+L Sme2.5_12177.1_g00001.1 165 MAERRRRKRLNGRLSMLRSIVP---KISKMDRTSILGDTIDYTKEL 207 78********************...99***************8876 PP >> Sme2.5_00236.1_g00020.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 31.3 0.0 1e-09 7.1e-07 4 49 .. 463 507 .. 461 510 .. 0.93 Alignments for each domain: == domain 1 score: 31.3 bits; conditional E-value: 1e-09 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYI 49 ++ rE+ RR+r+N+++ eL ll ++++K +K+++L Av+ + Sme2.5_00236.1_g00020.1 463 SKACREKLRRERLNDKFMELGALLE-PGRPPKTDKSTVLVDAVRMV 507 6889*********************.99**************9875 PP >> Sme2.5_03271.1_g00005.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 32.0 0.3 6.1e-10 4.1e-07 5 52 .. 152 196 .. 149 197 .. 0.96 Alignments for each domain: == domain 1 score: 32.0 bits; conditional E-value: 6.1e-10 HHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 h+++Er RR+ri ++++ L+el+P + K + a++L + +Y+k L Sme2.5_03271.1_g00005.1 152 HSIAERLRRERISERIKALQELVP---SCNKTDRAAMLDEILDYVKFL 196 99**********************...9*****************998 PP >> Sme2.5_01347.1_g00008.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 32.0 0.3 6e-10 4.1e-07 5 52 .. 149 193 .. 146 194 .. 0.96 Alignments for each domain: == domain 1 score: 32.0 bits; conditional E-value: 6e-10 HHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 h+++Er RR+ri ++++ L+el+P + K + a++L + +Y+k L Sme2.5_01347.1_g00008.1 149 HSIAERLRRERISERIKALQELVP---SCNKTDRAAMLDEILDYVKFL 193 99**********************...9*****************998 PP >> Sme2.5_00537.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.4 1.5 0.00082 0.56 2 19 .. 258 275 .. 257 275 .. 0.94 2 ! 18.0 0.0 1.5e-05 0.0099 23 53 .] 299 327 .. 297 327 .. 0.96 Alignments for each domain: == domain 1 score: 12.4 bits; conditional E-value: 0.00082 HHHHHHHHHHHHHHHHHH CS HLH 2 raahnerErrRRdriNsa 19 r++h++ E+rRR +iN++ Sme2.5_00537.1_g00003.1 258 RSKHSATEQRRRSKINDR 275 899*************96 PP == domain 2 score: 18.0 bits; conditional E-value: 1.5e-05 HHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 23 LrellPslppskKlsKaeiLekAveYIkhLq 53 Lr ++P ++++K +Ka+ L +++eYI+ Lq Sme2.5_00537.1_g00003.1 299 LRGIIP--NSDQKRDKASFLLEVIEYIHFLQ 327 999***..8********************98 PP >> Sme2.5_00386.1_g00001.1 /TE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 30.4 0.2 1.9e-09 1.3e-06 14 53 .] 20 61 .. 19 61 .. 0.92 Alignments for each domain: == domain 1 score: 30.4 bits; conditional E-value: 1.9e-09 HHHHHHHHHHHHCST..CSTTSS-STHHHHHHHHHHHHHHHH CS HLH 14 driNsaleeLrellP..slppskKlsKaeiLekAveYIkhLq 53 d+iN+ ++L++llP +++s K+s + +L+++++YIk+L+ Sme2.5_00386.1_g00001.1 20 DQINDLVSKLQQLLPelRNRSSDKVSASRVLQETCNYIKSLH 61 79*************77667777*****************96 PP >> Sme2.5_06337.1_g00004.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 30.7 0.1 1.6e-09 1.1e-06 8 53 .] 229 271 .. 223 271 .. 0.94 Alignments for each domain: == domain 1 score: 30.7 bits; conditional E-value: 1.6e-09 HHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 + ++RR+ri ++l+ L+el+P +++K++ +++LekA+ Y+k Lq Sme2.5_06337.1_g00004.1 229 AAKNRRERISERLKILQELVP---NGSKVDLVTMLEKAIGYVKFLQ 271 669******************...9*******************99 PP >> Sme2.5_03422.1_g00002.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.6 0.0 3.4e-09 2.3e-06 10 52 .. 128 167 .. 121 168 .. 0.94 Alignments for each domain: == domain 1 score: 29.6 bits; conditional E-value: 3.4e-09 HHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 r RR+ri +++ L++l+P ++K++ a++L +Av+Y+k L Sme2.5_03422.1_g00002.1 128 RHRRERISERIRILQRLVP---GGTKMDTASMLDEAVHYVKFL 167 99*****************...8******************98 PP >> Sme2.5_05639.1_g00001.1 /partial # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 30.2 0.1 2.3e-09 1.6e-06 5 53 .] 213 258 .. 209 258 .. 0.93 Alignments for each domain: == domain 1 score: 30.2 bits; conditional E-value: 2.3e-09 HHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +++ r+RR++i ++ +eL +l+P + +++ +e+L+ + +YIk Lq Sme2.5_05639.1_g00001.1 213 QSIAARQRRKKITDKTQELGKLIP---GGHRMNTSEMLQATFKYIKFLQ 258 56778*******************...799******************9 PP >> Sme2.5_11033.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 30.1 0.1 2.3e-09 1.6e-06 5 53 .] 215 260 .. 211 260 .. 0.93 Alignments for each domain: == domain 1 score: 30.1 bits; conditional E-value: 2.3e-09 HHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +++ r+RR++i ++ ++L +l+P + +++ ae+L+ + +YIk Lq Sme2.5_11033.1_g00001.1 215 QSIAARQRRKKITDKTQKLGKLIP---GGHRMNTAEMLQATFKYIKFLQ 260 56778*******************...799******************9 PP >> Sme2.5_04079.1_g00005.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 30.2 0.4 2.3e-09 1.5e-06 5 52 .. 151 195 .. 148 196 .. 0.96 Alignments for each domain: == domain 1 score: 30.2 bits; conditional E-value: 2.3e-09 HHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 h+++Er RR+ri +++ L+el+P + K + a +L + v+Y+k L Sme2.5_04079.1_g00005.1 151 HSIAERLRRERIAERIRALQELVP---SVNKTDRAIMLDEIVDYVKFL 195 99**********************...9******************98 PP >> Sme2.5_05926.1_g00003.1 /pseudo # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.8 0.3 2.9e-09 2e-06 6 53 .] 86 130 .. 81 130 .. 0.93 Alignments for each domain: == domain 1 score: 29.8 bits; conditional E-value: 2.9e-09 HHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 + Er+RR r++++l Lr+l+P + +K++Ka+i A+ Y++ Lq Sme2.5_05926.1_g00003.1 86 LISERKRRGRMKEKLYALRSLVP---NITKMDKASIIGDAILYVQGLQ 130 578********************...9*******************98 PP >> Sme2.5_06479.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.0 0.0 5.4e-09 3.7e-06 4 53 .] 176 223 .. 174 223 .. 0.97 Alignments for each domain: == domain 1 score: 29.0 bits; conditional E-value: 5.4e-09 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h+++Er RR++i ++++ L++l+P + +k Ka +L + ++Y+++Lq Sme2.5_06479.1_g00003.1 176 SHSLAERVRREKISERMKILQSLVP--GCDKVTGKALMLDEIINYVQSLQ 223 79***********************..79999*****************9 PP >> Sme2.5_09326.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.0 0.1 5.4e-09 3.6e-06 10 52 .. 150 189 .. 145 190 .. 0.94 Alignments for each domain: == domain 1 score: 29.0 bits; conditional E-value: 5.4e-09 HHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 r RR+ri +++ L++l+P ++K++ a++L +A++Y+k L Sme2.5_09326.1_g00003.1 150 RHRRERISERIRILQRLVP---GGTKMDTASMLDEAIHYVKFL 189 99*****************...8******************98 PP >> Sme2.5_01734.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.7 0.0 6.6e-09 4.5e-06 4 53 .] 149 196 .. 147 196 .. 0.97 Alignments for each domain: == domain 1 score: 28.7 bits; conditional E-value: 6.6e-09 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h+++Er RR++i ++++ L++l+P + +k Ka +L + ++Y+++Lq Sme2.5_01734.1_g00001.1 149 SHSLAERARREKISKKMKCLQDLVP--GCNKVTGKAGMLDEIINYVQSLQ 196 79***********************..799999****************9 PP >> Sme2.5_01649.1_g00012.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.8 0.0 6.1e-09 4.1e-06 4 53 .] 75 122 .. 73 122 .. 0.97 Alignments for each domain: == domain 1 score: 28.8 bits; conditional E-value: 6.1e-09 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h+++Er RR++i ++++ L+ l+P + +k Ka +L + ++Y+++Lq Sme2.5_01649.1_g00012.1 75 SHSLAERVRREKISQRMKILQALVP--GCDKVTGKALMLDEIINYVQSLQ 122 79***********************..79999*****************9 PP >> Sme2.5_01618.1_g00007.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.6 0.2 6.9e-09 4.7e-06 10 52 .. 175 214 .. 170 215 .. 0.94 Alignments for each domain: == domain 1 score: 28.6 bits; conditional E-value: 6.9e-09 HHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 r RR+ri +++ L++l+P ++K++ a++L +A++Y+k L Sme2.5_01618.1_g00007.1 175 RLRRERISEKIRILQRLVP---GGTKMDTASMLDEAIRYVKFL 214 89*****************...8******************98 PP >> Sme2.5_00066.1_g00020.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.3 0.0 9e-09 6.1e-06 4 53 .] 258 305 .. 256 305 .. 0.97 Alignments for each domain: == domain 1 score: 28.3 bits; conditional E-value: 9e-09 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ah+++Er RR++i ++++ L++l+P + +k Ka +L + ++Y+++Lq Sme2.5_00066.1_g00020.1 258 AHSLAERVRREKISERMKLLQDLVP--GCNKVTGKAVMLDEIINYVQSLQ 305 8************************..799999****************9 PP >> Sme2.5_02187.1_g00009.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.2 1.3 4.6e-09 3.2e-06 5 53 .] 21 70 .. 17 70 .. 0.91 Alignments for each domain: == domain 1 score: 29.2 bits; conditional E-value: 4.6e-09 HHHHHHHHHHHHHHHHHHHHHCSTCSTTSS.-STHHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsaleeLrellPslppsk.KlsKaeiLekAveYIkhLq 53 ++ +E++RR+++++ + +L +l+ ++++sk ls + Le+A +YIk+Lq Sme2.5_02187.1_g00009.1 21 RKTIEKNRRNQMKDLYMKLNSLVHHDQHSKvFLSLPDQLEEAANYIKKLQ 70 6789********************77777788*****************9 PP >> Sme2.5_01583.1_g00014.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.7 0.1 1.4e-08 9.4e-06 3 53 .] 226 274 .. 224 274 .. 0.96 Alignments for each domain: == domain 1 score: 27.7 bits; conditional E-value: 1.4e-08 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ++h+++Er RR+ri +++ L+el+P + +k Ka +L + ++Y+++Lq Sme2.5_01583.1_g00014.1 226 NSHSLAERVRRERISERMRLLQELVP--GCNKITGKAVMLDEIINYVQSLQ 274 58************************..799999****************9 PP >> Sme2.5_00081.1_g00022.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.9 0.1 1.2e-08 8e-06 4 53 .] 301 348 .. 299 348 .. 0.97 Alignments for each domain: == domain 1 score: 27.9 bits; conditional E-value: 1.2e-08 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h+++Er RR++i ++++ L++l+P + +k Ka +L + ++Y+++Lq Sme2.5_00081.1_g00022.1 301 SHSLAERVRREKISQRMKLLQDLVP--GCNKVTGKALMLDEIINYVQSLQ 348 79***********************..799999****************9 PP >> Sme2.5_00544.1_g00012.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.5 1.4 1.6e-08 1.1e-05 3 52 .. 41 87 .. 40 88 .. 0.91 Alignments for each domain: == domain 1 score: 27.5 bits; conditional E-value: 1.6e-08 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++h ++Er+RR+riNs l++L++l + +K +K +L++Av +k+L Sme2.5_00544.1_g00012.1 41 VTHAIAERKRRERINSHLHTLKKLFS---YLPKKDKPRVLTEAVTQLKEL 87 58**********************88...888999999999999988887 PP >> Sme2.5_00622.1_g00009.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.2 0.1 1.9e-08 1.3e-05 4 53 .] 197 244 .. 195 244 .. 0.91 Alignments for each domain: == domain 1 score: 27.2 bits; conditional E-value: 1.9e-08 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h+++Er RR++iN +++ L+el+P + sk a++L + ++++++Lq Sme2.5_00622.1_g00009.1 197 SHSLAERARREKINARMKLLQELVP--GCSKISGTAMVLDEIINHVQSLQ 244 79***********************..56666669*************98 PP >> Sme2.5_01764.1_g00004.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.0 0.1 2.2e-08 1.5e-05 10 52 .. 299 338 .. 294 339 .. 0.94 Alignments for each domain: == domain 1 score: 27.0 bits; conditional E-value: 2.2e-08 HHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 r+RR+ri +++ L++l+P ++K++ a++L +A +Y+k L Sme2.5_01764.1_g00004.1 299 RQRRERISERIRVLQRLVP---GGSKMDTASMLDEAANYLKFL 338 9******************...89*****************98 PP >> Sme2.5_01185.1_g00002.1 /pseudo # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.4 0.1 1.7e-08 1.1e-05 3 53 .] 332 380 .. 330 380 .. 0.96 Alignments for each domain: == domain 1 score: 27.4 bits; conditional E-value: 1.7e-08 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ++h+++Er RR++i ++++ L++l+P + +k Ka +L + ++Y+++Lq Sme2.5_01185.1_g00002.1 332 NSHSLAERIRREKISERMKYLQDLVP--GCNKVTGKAVMLDEIINYVQSLQ 380 58************************..799999****************9 PP >> Sme2.5_01808.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.4 0.0 3.4e-08 2.3e-05 3 53 .] 343 391 .. 341 391 .. 0.96 Alignments for each domain: == domain 1 score: 26.4 bits; conditional E-value: 3.4e-08 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 ++h+++Er RR++i ++++ L++l+P + +k Ka +L + ++Y+++Lq Sme2.5_01808.1_g00003.1 343 NSHSLAERVRREKISERMKFLQDLVP--GCDKVTGKAVMLDEIINYVQSLQ 391 58************************..79999*****************9 PP >> Sme2.5_00326.1_g00007.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.0 0.0 4.5e-08 3.1e-05 16 53 .] 251 286 .. 249 286 .. 0.95 Alignments for each domain: == domain 1 score: 26.0 bits; conditional E-value: 4.5e-08 HHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 16 iNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 i +++ +Lre++P +++K +Ka+ L +++eYI+ Lq Sme2.5_00326.1_g00007.1 251 ITEGFLKLREIIP--HSDQKRDKASFLLEVIEYIQFLQ 286 67899********..7*********************9 PP >> Sme2.5_03973.1_g00006.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.0 2.9 4.5e-08 3e-05 2 52 .. 111 161 .. 110 162 .. 0.94 Alignments for each domain: == domain 1 score: 26.0 bits; conditional E-value: 4.5e-08 HHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 2 raahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 ++ + +Er+RR+++ + +++Lr l+Ps K ++ L++ v+Y+k+L Sme2.5_03973.1_g00006.1 111 KVLRRDVERQRRRDMAKLYQRLRLLIPSKYLMGKRAISDHLKEIVDYVKDL 161 667889*********************999999****************99 PP >> Sme2.5_00925.1_g00014.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.7 0.0 1.2e-07 8.2e-05 4 53 .] 247 294 .. 245 294 .. 0.97 Alignments for each domain: == domain 1 score: 24.7 bits; conditional E-value: 1.2e-07 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h+++Er RR++i +++ L++l+P + +k Ka +L + ++Y+++Lq Sme2.5_00925.1_g00014.1 247 SHSLAERVRREKISERMRFLQDLVP--GCNKITGKAGMLDEIINYVQSLQ 294 79***********************..799999****************9 PP >> Sme2.5_00240.1_g00009.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.5 0.6 1.4e-07 9.5e-05 8 53 .] 68 113 .. 65 113 .. 0.96 Alignments for each domain: == domain 1 score: 24.5 bits; conditional E-value: 1.4e-07 HHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 Er+RR + + ++ L++l+P+ + K++ i+ + ++YIk+L+ Sme2.5_00240.1_g00009.1 68 KERNRRGKTAEMYSLLQSLIPTISHIHKVTREKIVAESTDYIKRLE 113 6******************************************995 PP >> Sme2.5_05101.1_g00002.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 0.1 0.2 5.8 4e+03 5 15 .. 47 57 .. 39 60 .. 0.84 2 ! 22.3 0.0 6.7e-07 0.00046 4 31 .. 127 154 .. 125 178 .. 0.85 Alignments for each domain: == domain 1 score: 0.1 bits; conditional E-value: 5.8 HHHHHHHHHHH CS HLH 5 hnerErrRRdr 15 +n + r+RRd+ Sme2.5_05101.1_g00002.1 47 KNHAARKRRDD 57 68888999985 PP == domain 2 score: 22.3 bits; conditional E-value: 6.7e-07 HHHHHHHHHHHHHHHHHHHHHHCST.CST CS HLH 4 ahnerErrRRdriNsaleeLrellP.slp 31 +h+++Er RR++i ++++ L++l+P + + Sme2.5_05101.1_g00002.1 127 SHSLAERARREKISERMKILQDLVPgC-N 154 79***********************41.2 PP >> Sme2.5_01232.1_g00025.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.8 0.1 2.2e-07 0.00015 8 52 .. 297 338 .. 294 339 .. 0.93 Alignments for each domain: == domain 1 score: 23.8 bits; conditional E-value: 2.2e-07 HHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 + rrRR++i +++ L++l+P ++ ++ a++L +A +Y+k L Sme2.5_01232.1_g00025.1 297 AARRRREKISERIRILQKLVP---GGTYMDTASMLDEAANYLKFL 338 569******************...7999***************98 PP >> Sme2.5_06123.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.8 0.1 2.2e-07 0.00015 4 53 .] 222 267 .. 220 267 .. 0.93 Alignments for each domain: == domain 1 score: 23.8 bits; conditional E-value: 2.2e-07 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 + n +Er+RR ++++ + L+ ++P ++++ +++L +Av+Y+k+L+ Sme2.5_06123.1_g00003.1 222 TSNCNERKRR-KLKKMVKALKGIVP---GASRMNTVTVLDEAVRYLKSLK 267 6799****98.6*************...799*****************95 PP >> Sme2.5_00835.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.4 0.0 3e-07 0.0002 4 53 .] 120 167 .. 118 167 .. 0.92 Alignments for each domain: == domain 1 score: 23.4 bits; conditional E-value: 3e-07 HHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +h+++Er RR +iN++l L++++P + k + a +L + ++Y+++Lq Sme2.5_00835.1_g00003.1 120 SHSLAERVRRGKINERLRCLQDIVP--GCYKTMGMAGMLDEIINYVQSLQ 167 79***********************..57777999999999999999998 PP >> Sme2.5_09229.1_g00001.1 /TE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.3 0.3 1.3e-06 0.00089 18 52 .. 23 59 .. 19 60 .. 0.86 2 ? 0.8 0.0 3.4 2.3e+03 13 28 .. 63 78 .. 61 85 .. 0.78 Alignments for each domain: == domain 1 score: 21.3 bits; conditional E-value: 1.3e-06 HHHHHHHHCST..CSTTSS-STHHHHHHHHHHHHHHH CS HLH 18 saleeLrellP..slppskKlsKaeiLekAveYIkhL 52 + ++L++llP +++s+K s + +L+++++YI+ L Sme2.5_09229.1_g00001.1 23 ELVSKLQQLLPeiRNRRSSKASASKVLQETCNYIRNL 59 56689******88778888****************98 PP == domain 2 score: 0.8 bits; conditional E-value: 3.4 HHHHHHHHHHHHHCST CS HLH 13 RdriNsaleeLrellP 28 +d++ ++l++L + + Sme2.5_09229.1_g00001.1 63 VDDLSDRLSQLLSTID 78 6889999999988875 PP >> Sme2.5_01047.1_g00014.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.2 0.0 7e-07 0.00047 2 53 .] 158 206 .. 157 206 .. 0.85 Alignments for each domain: == domain 1 score: 22.2 bits; conditional E-value: 7e-07 HHHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 2 raahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +a++ + +r RR +i ++++ L ellP+ sk Ka+ + +++Ik+Lq Sme2.5_01047.1_g00014.1 158 KARAALSDRHRRMKIAEGIDALGELLPC---SKQGGKASQMDEIIDHIKYLQ 206 56778889*******************5...555557777789999999998 PP >> Sme2.5_01135.1_g00009.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.4 3.0 1.2e-06 0.00083 3 52 .. 81 127 .. 79 128 .. 0.94 Alignments for each domain: == domain 1 score: 21.4 bits; conditional E-value: 1.2e-06 HHHHHHHHHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhL 52 +h + Er RR++ ++++ L +llP ++K++K +i++ A + I +L Sme2.5_01135.1_g00009.1 81 HKHMIQERIRREKQKQSYLNLHKLLP---MGTKNEKNAIVQTAARRIEEL 127 579999********************...9**************999887 PP >> Sme2.5_06085.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.7 0.3 4.3e-06 0.0029 10 53 .] 227 267 .. 224 267 .. 0.98 Alignments for each domain: == domain 1 score: 19.7 bits; conditional E-value: 4.3e-06 HHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 r+RR+++ ++ L +llP +kK++ a++Le+A +Y+k Lq Sme2.5_06085.1_g00003.1 227 RKRRQKLSEKTRCLEKLLP---WDKKMDTATMLEEAYKYVKFLQ 267 9******************...8********************9 PP >> Sme2.5_04102.1_g00014.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.3 0.0 5.7e-06 0.0038 10 53 .] 241 281 .. 237 281 .. 0.93 Alignments for each domain: == domain 1 score: 19.3 bits; conditional E-value: 5.7e-06 HHHHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 + R +++ +++ L++l+ p K + a++L +A+eYIk L+ Sme2.5_04102.1_g00014.1 241 KARKEKMGDRITALQQLVS---PFGKTDTASVLSEAIEYIKFLH 281 789999*************...999****************995 PP >> Sme2.5_06668.1_g00002.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.3 0.6 2.4e-05 0.016 3 52 .. 16 66 .. 14 75 .. 0.73 Alignments for each domain: == domain 1 score: 17.3 bits; conditional E-value: 2.4e-05 HHHHHHHHHHHHHHHHHHHHHHHCST....CSTTSS-STHHHHHHHHHHHHHHH CS HLH 3 aahnerErrRRdriNsaleeLrellP....slppskKlsKaeiLekAveYIkhL 52 ++e+E++RR+ +++ +eL +llP s ++ + + Av+YI +L Sme2.5_06668.1_g00002.1 16 LERKEVEKNRRNYMKNLCNELYSLLPithvS---QETMVMQDKIDAAVKYIESL 66 5689**********************85442...43333333344566666665 PP >> Sme2.5_04864.1_g00002.1 /TE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 17.0 0.1 2.9e-05 0.02 14 53 .] 20 60 .. 20 60 .. 0.85 Alignments for each domain: == domain 1 score: 17.0 bits; conditional E-value: 2.9e-05 HHHHHHHHHHHHCST.CSTTSS-STHHHHHHHHHHHHHHHH CS HLH 14 driNsaleeLrellP.slppskKlsKaeiLekAveYIkhLq 53 d+i + ++L+ l+ ++s K s + +L+++++YI++L+ Sme2.5_04864.1_g00002.1 20 DQIADLVSKLQLLIEsRTRRSDKGSASKVLQETCNYIRSLH 60 688899999****994445555*****************96 PP >> Sme2.5_10236.1_g00005.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 16.5 0.0 4.3e-05 0.029 12 53 .] 342 380 .. 340 380 .. 0.90 Alignments for each domain: == domain 1 score: 16.5 bits; conditional E-value: 4.3e-05 HHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 12 RRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 R +++ +++ L++l+ p K + a++L +A+eYIk L+ Sme2.5_10236.1_g00005.1 342 RKEKLGDRITALQQLVS---PFGKTDTASVLHEAIEYIKFLH 380 66788899********9...999****************995 PP >> Sme2.5_07700.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 0.7 0.0 3.6 2.4e+03 14 28 .. 158 172 .. 155 199 .. 0.79 2 ? 13.7 0.1 0.00031 0.21 13 53 .] 558 595 .. 554 595 .. 0.94 Alignments for each domain: == domain 1 score: 0.7 bits; conditional E-value: 3.6 HHHHHHHHHHHHCST CS HLH 14 driNsaleeLrellP 28 ++i++ ++eL+el+ Sme2.5_07700.1_g00001.1 158 KHIRDVFSELQELMA 172 6899********997 PP == domain 2 score: 13.7 bits; conditional E-value: 0.00031 HHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 13 RdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 R+ i ++++eLrel+P +++K s + Le++++++ +q Sme2.5_07700.1_g00001.1 558 RQLIQDRIKELRELVP---NGSKCSIDSLLERTIKHMLFMQ 595 67799***********...9*****************9987 PP >> Sme2.5_05849.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 15.1 0.2 0.00012 0.08 30 53 .] 231 254 .. 183 254 .. 0.90 Alignments for each domain: == domain 1 score: 15.1 bits; conditional E-value: 0.00012 STTSS-STHHHHHHHHHHHHHHHH CS HLH 30 lppskKlsKaeiLekAveYIkhLq 53 ++++++ +Ka++L +++eY+k+Lq Sme2.5_05849.1_g00001.1 231 NQSERRIDKASMLDEVIEYLKQLQ 254 56778******************9 PP >> Sme2.5_04783.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 15.3 0.0 0.0001 0.068 4 29 .. 103 131 .. 101 178 .. 0.84 Alignments for each domain: == domain 1 score: 15.3 bits; conditional E-value: 0.0001 HHHHHHHHHHHHHHHHHHHHHHCST...C CS HLH 4 ahnerErrRRdriNsaleeLrellP...s 29 ah+++Er RR++i ++++ L++l+P + Sme2.5_04783.1_g00003.1 103 AHSLAERVRREKIGERMKFLQDLVPgcnK 131 8************************5440 PP >> Sme2.5_02990.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 15.3 0.0 0.0001 0.07 12 53 .] 172 210 .. 170 210 .. 0.92 Alignments for each domain: == domain 1 score: 15.3 bits; conditional E-value: 0.0001 HHHHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 12 RRdriNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 R +++ ++++ L++l+ p K + a++L +A+ YIk Lq Sme2.5_02990.1_g00001.1 172 RKEKLGDRIAALQQLVA---PFGKTDTASVLMEAIGYIKFLQ 210 6678889**********...999******************9 PP >> Sme2.5_05033.1_g00003.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 14.3 0.2 0.00022 0.15 16 52 .. 103 169 .. 100 170 .. 0.92 Alignments for each domain: == domain 1 score: 14.3 bits; conditional E-value: 0.00022 HHHHHHHHHHCST..............................CSTTSS-STHHHHHHHHHHHHHHH CS HLH 16 iNsaleeLrellP..............................slppskKlsKaeiLekAveYIkhL 52 iN a ++L++l P ++++K +K+ iL++ +YI+ L Sme2.5_05033.1_g00003.1 103 INLAKQKLKRLAPtlstwsrrelgdiyanvkdfeertrvakeeFITNNTKENKIKILTLNAQYIRFL 169 8888999999999999****************99999999999888*******************98 PP >> Sme2.5_00475.1_g00013.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.3 4.4 0.00042 0.28 2 19 .. 47 64 .. 46 65 .. 0.93 Alignments for each domain: == domain 1 score: 13.3 bits; conditional E-value: 0.00042 HHHHHHHHHHHHHHHHHH CS HLH 2 raahnerErrRRdriNsa 19 r++h+e E+rRR +iN++ Sme2.5_00475.1_g00013.1 47 RSKHSETEQRRRIKINER 64 89**************85 PP >> Sme2.5_03374.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.0 0.0 0.00054 0.37 14 53 .] 146 182 .. 143 182 .. 0.89 Alignments for each domain: == domain 1 score: 13.0 bits; conditional E-value: 0.00054 HHHHHHHHHHHHCSTCSTTSS-STHHHHHHHHHHHHHHHH CS HLH 14 driNsaleeLrellPslppskKlsKaeiLekAveYIkhLq 53 +++ +++ L +l+ p K + a++L +A+ YI+ Lq Sme2.5_03374.1_g00001.1 146 EKLGDRITSLHQLVS---PFGKTDTASVLSEAIGYIRFLQ 182 567789999999999...899******************9 PP >> Sme2.5_15381.1_g00001.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.1 0.1 0.001 0.69 13 26 .. 61 74 .. 51 108 .. 0.88 Alignments for each domain: == domain 1 score: 12.1 bits; conditional E-value: 0.001 HHHHHHHHHHHHHC CS HLH 13 RdriNsaleeLrel 26 Rd+iN+++++L+el Sme2.5_15381.1_g00001.1 61 RDNINQSYDKLKEL 74 9***********99 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (53 nodes) Target sequences: 85446 (30979771 residues searched) Passed MSV filter: 2650 (0.0310137); expected 1708.9 (0.02) Passed bias filter: 2054 (0.0240386); expected 1708.9 (0.02) Passed Vit filter: 237 (0.00277368); expected 85.4 (0.001) Passed Fwd filter: 126 (0.00147462); expected 0.9 (1e-05) Initial search space (Z): 85446 [actual number of targets] Domain search space (domZ): 126 [number of targets reported over threshold] # CPU time: 0.69u 0.14s 00:00:00.83 Elapsed: 00:00:00.32 # Mc/sec: 5131.02 // [ok]