#NEXUS [written Fri Nov 08 20:33:24 CST 2019 by Mesquite version 3.51 (build 898) at LAPTOP-8VLJK7DM/192.168.43.179] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=45; TAXLABELS Ateleaspis Anjiaspis Antiquisagittaspis Asiaspis Bannhuanaspis Changxingaspis Damaspis Dayongaspis Dongfangaspis Duyunolepis Gantarostraspis Geraspis Hanyangaspis Hunanaspis Kwangnanaspis Laxaspis Lopadaspis Lungmenshanaspis Macrothyraspis Meishanaspis Microhoplonaspis Nanpanaspis Pentathyraspis Polybranchiaspis Qingmenaspis Sanchaspis Sanqiaspis Shuyu R.xikengensis Sinogaleaspis Sinoszechuanaspis Wenshanaspis Wumengshanaspis Yunnanogaleaspis Zhaotongaspis Stephaspis Platyventaspis Nanningaspis Gumuaspis Nochelaspis Tridensaspis Pterogonaspis Eugaleaspis Dunyu R.shipanensis ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=59; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1 2 3 4"; MATRIX Ateleaspis 00001??0???000??????00???????00??????01???0?0??000???01???? Anjiaspis 1111020001000100000100??0????200000??0001001110000?00012011 Antiquisagittaspis 111411?001002101100011000????1011010100021200001?0?01011??? Asiaspis 111311?001011110000111100????10?011?10002020000110?0001???? Bannhuanaspis 111211?0010010????0000??0????101100000012020000111?0001???? Changxingaspis 111200?0100000????0000??0????0001000001???20001001000010000 Damaspis 111211?0010010????0000??0????11110000001201000011110?01?101 Dayongaspis 111101?010000100000000??0????00000000?1???20000000?0?011?00 Dongfangaspis 111211?0010010????0000??0????11110000001202000012100001010? Duyunolepis 111211?0010110????1?00??0?????0??????0???????0012100001010? Gantarostraspis 111411?001102120000111010?????01101010002120000110?1001???? Geraspis 111111?001001100001?00??0?????010110100000200?0010?0001110? Hanyangaspis 111010?0100020????0000??0????0000000001???20000?00?0?011?00 Hunanaspis 111311?10101211?001011100?????0???????????????01?0?0001???0 Kwangnanaspis 111111?001001100001?00??0????10?011?10????200?0010?0?01???? Laxaspis 111211?0010010????0000??0????11110000001201000011110?01?101 Lopadaspis 111211?0010010????1?00??0????10110101001202000012100001???? Lungmenshanaspis 111311?101011110001?111010000?0???????????????0110?000110?? Macrothyraspis 111311?101012110101?11101111110???1??0002020000110?000111?? Meishanaspis 1111020002001100000100??0????10000001?0000??010000?00010000 Microhoplonaspis 111211?0010010????0000??10000?0??????0???????0011100001???? Nanpanaspis 111311?001011111101?11100????10101101000202000011100?01???? Pentathyraspis 111211?0010110????0010??1000010?0?101100202000011100001???? Polybranchiaspis 111211?0010010????0000??0????111000000012010000111000011101 Qingmenaspis 111311?001010110001?111011110?0???????????????01?0?000101?? Sanchaspis 111411?001001101100011000????101101010012120000110?0101?1?1 Sanqiaspis 111411?001002120001?11000????10?011??0002020000110?1001???? Shuyu 1111120002001100000100??0????10100001?00002?010000?00010000 R.xikengensis 1111120002001100000100??0????201010011002001110000?00002010 Sinogaleaspis 1111120001101100000100??0????201000011002001110000?00012100 Sinoszechuanaspis 111311?101012110111?111011111?0?0110100020200001?0?0001???1 Wenshanaspis 111411?001002100010000??0????201101000002120000120?0001100? Wumengshanaspis 111411?001?02120000111110?????0???????????????0110?1001010? Yunnanogaleaspis 1111120001001100000000??0????101011111001001110000?00010100 Zhaotongaspis 111411?001002101110100??0????101101010002?20000120?0001???? Stephaspis 111301?001011110101?1110100001???01?00002020000??0?00011??? Platyventaspis 11140???01???0????1011000???????????????????????0100?11???? Nanningaspis 11141???01???0????1011000????????????????????????100?11???? Gumuaspis 111411?0010010????0011000????1010010?00020200001?10000100?? Nochelaspis 1111121001001100000000??0????10101111?001001110000?00010100 Tridensaspis 111112100110111000??11100????10??????100?001110000?00010?00 Pterogonaspis 1111120001101110000011100????101011111001001110000?00010100 Eugaleaspis 1111121001101100001?00??0????101011111001001110000?00010110 Dunyu 1111121001201200001?00??0????101011111001001110000?00010110 R.shipanensis 1111120002001100000100??0????????????????????10000?0000?0?? ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 59; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Mk1 (est.)': 1- 59; END; Begin paup; log start file = platyventaspis.log replace; set autoclose = yes; pset opt = deltran mstaxa = variable; outgroup 'Ateleaspis'; set maxtrees = 1000 increase = auto autoclose = no torder = right tcompress = no taxlabels = full storebrlens = yes storetreewts = yes outroot = polytomy; hsearch addseq = random nreps = 1000; savetrees file = subset2a.tre replace; contree / treefile = subset2acon.tre majrule = yes replace; describetree 10 / apolist = yes chglist = yes; Quit; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1573216404622; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 6689190997588810162; tell It; setDefaultOrder 21 0 1 2 3 4 5 6 7 8 10 11 13 14 15 16 17 18 19 20 22 23 25 26 28 29 30 31 32 33 34 35 36 44 38 39 40 41 12 45 46 47 49 52 53; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 687957669902997440; tell It; setDefaultOrder 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 57 53 54 63 64 59; attachments ; endTell; mqVersion 351; checksumv 0 3 643807585 null getNumChars 59 numChars 59 getNumTaxa 45 numTaxa 45 short true bits 31 states 31 sumSquaresStatesOnly 8793.0 sumSquares 8793.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1920 940; setLocation -9 -9; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #687957669902997440 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1820 868; setLocation -9 -9; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.NoColor.NoColor; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges on; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames on; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize on; toggleColorsPanel off; toggleDiagonal on; setDiagonalHeight 80; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.categ.SmallStateNamesEditor.SmallStateNamesEditor; tell It; panelOpen true; endTell; endTell; endTell; endTell; end;