gene_id baseMean baseMean_control_NX baseMean_case_PX foldChange log2FoldChange pval padj up_down expression_NX1 expression_NX2 expression_NX3 expression_PX1 expression_PX2 expression_PX3 NR id NR annotation Swissprot id Swissprot annotation KEGG id KO KEGG gene name KEGG description Pathway Pathway definition KOG id KOG defination KOG code KOG categories KOG class eggNOG abbreviation eggNOG id eggNOG description GO annotation Pfam IDs Pfam Description TRINITY_DN0_c0_g1_i1 10.93225522 21.86451044 0 0 #NAME? 1.37E-05 0.000108333 Down 6.276514 5.156044 1.629421 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10001_c0_g1_i2 10.99418558 1.0637287 20.92464246 19.6710331 4.298000823 1.93E-05 0.000148379 Up 0.1113687 0 0.2538748 2.034083 0.9366297 2.13824 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10003_c0_g1_i2 48.29795428 28.10814328 68.48776528 2.436580908 1.284858129 0.000667136 0.003645957 Up 4.097411 6.288985 6.018089 8.379287 11.54505 12.2441 PIN09438.1 hypothetical protein CDL12_17977 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10004_c0_g1_i1 65.04831442 93.56789218 36.52873666 0.3903982 -1.356981695 3.05E-05 0.000225292 Down 14.30406 13.33725 12.76903 3.816703 3.85873 5.05465 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10012_c0_g1_i1 6.025535559 1.740436795 10.31063432 5.924164756 2.566611764 0.029656958 0.09333314 Up 3.73E-32 0.4872679 0.1944708 1.650037 1.177839 0.5340894 KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN10021_c0_g1_i1 6.913107456 13.09119654 0.735018369 0.056146004 -4.154672852 0.001618183 0.007990232 Down 2.552885 1.029422 1.271101 0.204648 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10040_c0_g1_i1 7.92151635 14.33643764 1.506595062 0.105088523 -3.250322972 0.003466701 0.015473351 Down 1.78684 3.99117 1.566722 0.242912 0 0.2467556 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10044_c0_g1_i2 13.66210421 0.624179352 26.70002907 42.77621325 5.418736869 6.15E-07 6.09E-06 Up 0 0.2394066 0 5.287366 2.357025 2.741772 AIC62617.1 "UBB, partial [synthetic construct]" P42740|UBIQP_AGLNE Polyubiquitin OS=Aglaothamnion neglectum OX=2765 PE=2 SV=2 -- -- -- -- -- -- KOG0001 Ubiquitin and ubiquitin-like proteins [OR] CELLULAR PROCESSES AND SIGNALING|POORLY CHARACTERIZED "Posttranslational modification, protein turnover, chaperones |General function prediction only " O COG5272 ubiquitin Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737); "PF00240.22,PF11976.7,PF14560.5,PF13881.5,PF10302.8" Ubiquitin family|Ubiquitin-2 like Rad60 SUMO-like|Ubiquitin-like domain|Ubiquitin-2 like Rad60 SUMO-like|DUF2407 ubiquitin-like domain TRINITY_DN10050_c0_g1_i1 8.773311348 13.90844849 3.638174202 0.261580161 -1.934674966 0.040807523 0.120534611 Down 1.439737 2.303599 2.589397 0.4544184 0.9066939 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10054_c0_g1_i1 4.628141781 0.936269028 8.320014533 8.886350274 3.151591009 0.046307753 0.133288063 Up 0 0.6278409 0 0.6640935 0.6746277 2.689734 XP_012840056.1 PREDICTED: uncharacterized protein LOC105960429 isoform X2 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10056_c0_g1_i1 12.52008907 25.04017815 0 0 #NAME? 8.82E-07 8.55E-06 Down 1.111235 2.635581 1.279311 0 0 0 PIN01285.1 Iron/ascorbate family oxidoreductase [Handroanthus impetiginosus] Q9XG83|G2OX_PHACN Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus OX=3886 GN=GA2OX1 PE=2 SV=1 gra:105778651 K04125 E1.14.11.13 gibberellin 2-oxidase ko00904 Diterpenoid biosynthesis KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: gibberellin biosynthetic process (GO:0009686);|Molecular Function: gibberellin 2-beta-dioxygenase activity (GO:0045543);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN10063_c0_g1_i1 6.542435686 12.3604009 0.724470471 0.058612215 -4.092654839 0.002433759 0.011400422 Down 1.929548 0.9496704 1.230443 0 0.1555269 0 PIN03091.1 hypothetical protein CDL12_24389 [Handroanthus impetiginosus] Q43845|SPSA_SOLTU Probable sucrose-phosphate synthase OS=Solanum tuberosum OX=4113 GN=SPS PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Biological Process: sucrose biosynthetic process (GO:0005986);|Molecular Function: sucrose synthase activity (GO:0016157);|Molecular Function: sucrose-phosphate synthase activity (GO:0046524); -- -- TRINITY_DN10063_c1_g1_i2 8.814019818 17.62803964 0 0 #NAME? 3.94E-06 3.42E-05 Down 1.265988 2.207692 1.723247 1.34E-79 1.05E-99 2.30E-86 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10066_c0_g1_i1 16.12787573 30.71259808 1.543153387 0.050244964 -4.314877184 1.66E-07 1.78E-06 Down 1.958176 4.43779 4.106316 0 0 0.421474 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10066_c0_g2_i1 19.73044178 38.72586519 0.735018369 0.018980037 -5.719373356 1.01E-10 1.62E-09 Down 5.968591 3.960035 3.192213 0.1770621 0 6.92E-07 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10076_c0_g1_i1 16.3825201 25.67059272 7.094447476 0.276364771 -1.855354372 0.006228986 0.025535299 Down 5.947773 3.159219 3.624074 0 1.413617 1.44881 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10082_c0_g1_i1 36.51537524 72.30628001 0.724470471 0.010019468 -6.641050257 6.00E-21 2.10E-19 Down 4.626811 5.926473 6.52467 0 0.1589702 0 ADR78284.1 chimeric ATP6 protein [synthetic construct] P21535|ATP6_SCHPO ATP synthase subunit a OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=atp6 PE=3 SV=3 spo:ScpofMp06 K02126 "ATPeF0A, MTATP6, ATP6" F-type H+-transporting ATPase subunit a ko00190 Oxidative phosphorylation KOG4665 ATP synthase F0 subunit 6 and related proteins [C] METABOLISM Energy production and conversion C COG0356 it plays a direct role in the translocation of protons across the membrane (By similarity) "Cellular Component: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) (GO:0000276);|Molecular Function: structural molecule activity (GO:0005198);|Molecular Function: proton transmembrane transporter activity (GO:0015078);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: mitochondrial ATP synthesis coupled proton transport (GO:0042776);|Biological Process: ATP hydrolysis coupled cation transmembrane transport (GO:0099132);" -- -- TRINITY_DN10083_c0_g1_i1 20.70176573 35.84168947 5.561841986 0.155178008 -2.68800398 2.19E-05 0.000166578 Down 6.697565 6.447953 5.31048 0.3795179 1.182724 0.8474719 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10094_c0_g1_i1 11.30971747 18.51953912 4.099895831 0.221382174 -2.175389036 0.009619105 0.036878379 Down 2.049482 1.505174 1.482789 0.3145522 0.2363893 0.3557305 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10105_c0_g1_i2 30.08233175 60.16466351 0 0 #NAME? 2.27E-10 3.48E-09 Down 10.4709 4.0583 7.685715 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10108_c0_g1_i1 6.723047041 13.44609408 0 0 #NAME? 6.73E-05 0.000463566 Down 0.8623277 0.7183476 1.925275 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10108_c0_g2_i1 60.94130634 37.48791076 84.39470191 2.251251142 1.170727008 0.000278653 0.00167535 Up 2.471933 2.353643 1.509728 3.778692 3.718018 4.003466 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10115_c0_g1_i1 20.18075937 38.18810732 2.173411413 0.056913305 -4.13509022 0.000113697 0.000744571 Down 4.519278 11.58805 5.718132 0 0.988965 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10116_c0_g1_i2 127.2312255 173.5064619 80.95598917 0.466587747 -1.099779673 1.84E-06 1.69E-05 Down 6.967912 6.842878 7.64174 2.194529 3.102111 2.781623 PIM97452.1 hypothetical protein CDL12_30078 [Handroanthus impetiginosus] O65695|SAU50_ARATH Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1 sind:105166021 K14488 SAUR SAUR family protein ko04075 Plant hormone signal transduction -- -- -- -- -- S ENOG410YQII auxin-responsive protein Biological Process: auxin-activated signaling pathway (GO:0009734);|Biological Process: regulation of growth (GO:0040008); -- -- TRINITY_DN10132_c0_g1_i1 5.305323052 10.6106461 0 0 #NAME? 0.000631501 0.003472107 Down 0.8239897 3.287345 2.206843 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10134_c0_g1_i1 34.93119798 54.95640248 14.90599347 0.271233065 -1.882395033 3.34E-05 0.000245281 Down 6.974327 5.817638 6.743232 1.277295 1.294076 1.68609 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10139_c0_g1_i1 275.2524541 0 550.5049081 Inf Inf 4.36E-178 2.61E-175 Up 0 0 0 7.27722 8.677736 8.693533 XP_026383234.1 uncharacterized protein LOC113278679 [Papaver somniferum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBST Mariner sub-class -- -- -- TRINITY_DN10144_c0_g1_i2 91.00425591 54.78257964 127.2259322 2.322379359 1.215603655 6.47E-06 5.41E-05 Up 9.563901 14.42764 9.603259 21.51817 18.93391 22.31871 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10148_c0_g1_i1 9.563338047 19.12667609 0 0 #NAME? 1.14E-06 1.09E-05 Down 1.220496 1.255228 1.981348 0 0 0 KHN23468.1 "Transposon TX1 putative 149 kDa protein, partial [Glycine soja]" -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111K5V Reverse transcriptase (RNA-dependent DNA polymerase) -- -- -- TRINITY_DN10153_c0_g2_i1 53.16965491 34.12053725 72.21877256 2.116577826 1.081733537 0.00211591 0.0101092 Up 2.662446 3.227632 2.668483 6.126886 3.452719 5.09153 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10157_c0_g1_i1 8.11568894 16.23137788 0 0 #NAME? 1.20E-05 9.57E-05 Down 1.160973 1.943419 1.080692 0 0 0 XP_022889475.1 uncharacterized protein LOC111404988 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10158_c0_g1_i1 7.641012334 15.28202467 0 0 #NAME? 5.62E-05 0.000393778 Down 4.24785 2.488723 1.319755 0 3.84E-76 0 EPS59181.1 "hypothetical protein M569_15629, partial [Genlisea aurea]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHE3 NA -- -- -- TRINITY_DN10166_c0_g1_i1 16.52817152 25.6752343 7.381108746 0.287479704 -1.798467992 0.008655624 0.033789539 Down 4.263753 2.857241 2.288534 0.861244 0.860293 0.4214804 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10170_c0_g1_i1 8.773391213 3.41482296 14.13195947 4.138416437 2.049078827 0.030328043 0.095041827 Up 0 1.214969 0.6459107 2.596241 1.511155 1.99827 EOY08513.1 Uncharacterized protein TCM_023017 [Theobroma cacao] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YIHT Retrotransposon protein -- -- -- TRINITY_DN10176_c0_g1_i1 16.95343228 31.59213448 2.31473008 0.073269189 -3.770649538 6.93E-07 6.81E-06 Down 5.841124 5.244561 6.560246 0 0 1.095948 XP_020551503.1 potassium channel SKOR-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- U ENOG410XPSE "Potassium voltage-gated channel, subfamily H (Eag-related), member" -- -- -- TRINITY_DN10184_c0_g1_i3 58.77557436 36.31868687 81.23246186 2.236657458 1.161344326 0.000473118 0.002689238 Up 2.88829 3.81905 2.741169 5.72244 6.027581 5.267796 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10190_c1_g1_i2 47.90517129 17.93748423 77.87285834 4.341347836 2.118143018 3.63E-08 4.27E-07 Up 1.15308 0.2677085 0.6407604 2.514884 2.519227 2.177818 XP_019197536.1 PREDICTED: uncharacterized protein LOC109191356 isoform X1 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBST Mariner sub-class -- -- -- TRINITY_DN10190_c1_g2_i1 68.94898947 44.72190018 93.17607876 2.083455273 1.058978129 0.000810149 0.004334129 Up 4.417654 5.279826 5.716652 7.285045 8.313592 10.44568 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10196_c0_g1_i1 677.6831423 117.6567206 1237.709564 10.51966736 3.395017182 6.21E-157 3.13E-154 Up 11.76437 14.3807 11.36901 100.6654 101.3672 116.5835 EYU43991.1 hypothetical protein MIMGU_mgv1a015249mg [Erythranthe guttata] O24248|PRU1_PRUAV Major allergen Pru av 1 OS=Prunus avium OX=42229 GN=PRUA1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YZ38 Pathogenesis-related protein Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607); PF00407.18 Pathogenesis-related protein Bet v I family TRINITY_DN10203_c0_g1_i1 152.1479148 61.56577484 242.7300547 3.942613495 1.979152286 1.12E-18 3.35E-17 Up 6.917205 9.827293 14.31534 33.57608 31.21677 33.60663 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10212_c0_g2_i1 8.970290894 14.1923733 3.748208493 0.264100191 -1.920842752 0.041248744 0.121608381 Down 1.450047 1.639923 1.091972 0.495211 0 0.3419999 XP_018860397.1 PREDICTED: uncharacterized protein LOC109022054 [Juglans regia] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN10221_c0_g1_i1 14.30095127 28.60190254 0 0 #NAME? 0.002326801 0.010959892 Down 3.204095 4.229672 1.70E-48 3.26E-56 1.45E-61 2.45E-61 NP_001345198.1 putative aquaporin PIP1 [Glycine max] P25794|PIP2_PEA Probable aquaporin PIP-type 7a OS=Pisum sativum OX=3888 GN=TRG-31 PE=2 SV=2 gmx:100780145 K09872 PIP aquaporin PIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Cellular Component: plasma membrane (GO:0005886);|Molecular Function: channel activity (GO:0015267);|Cellular Component: integral component of membrane (GO:0016021); PF00230.19 Major intrinsic protein TRINITY_DN10236_c0_g1_i1 9.609849807 17.03046635 2.18923326 0.128548051 -2.959620357 0.021556352 0.071917352 Down 0.5128884 4.383281 3.908474 0.5331749 0.5238886 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10237_c0_g1_i1 11.94823702 23.89647405 0 0 #NAME? 3.74E-08 4.37E-07 Down 1.807141 2.404005 2.744618 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10249_c0_g1_i1 143.9072147 34.67474261 253.1396868 7.300405649 2.86797663 1.72E-23 6.93E-22 Up 1.832842 1.25358 3.192837 13.70941 10.05489 13.31669 KZV27092.1 hypothetical protein F511_36998 [Dorcoceras hygrometricum] P86352|LECA_SPAPA Seed lectin alpha chain OS=Spatholobus parviflorus OX=132465 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41122PY L-type lectin-domain containing receptor kinase Molecular Function: carbohydrate binding (GO:0030246);|Biological Process: killing of cells of other organism (GO:0031640);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: defense response to fungus (GO:0050832); PF00139.18 Legume lectin domain TRINITY_DN10249_c0_g2_i1 894.2940855 386.0302461 1402.557925 3.633285057 1.86127456 1.97E-73 3.53E-71 Up 22.21387 25.85802 26.08888 73.16917 75.85537 68.23326 KZV27092.1 hypothetical protein F511_36998 [Dorcoceras hygrometricum] P81371|LECS_VATMA Seed lectin OS=Vatairea macrocarpa OX=77050 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: carbohydrate binding (GO:0030246);|Molecular Function: metal ion binding (GO:0046872); PF00139.18 Legume lectin domain TRINITY_DN10250_c0_g1_i2 26.864211 51.48680858 2.241613431 0.043537626 -4.521593437 1.07E-08 1.35E-07 Down 4.802739 2.542379 2.770217 0.2525086 0 0.129188 XP_015162527.1 PREDICTED: protein TSS isoform X2 [Solanum tuberosum] F4JKH6|TSS_ARATH Protein TSS OS=Arabidopsis thaliana OX=3702 GN=TSS PE=1 SV=1 sot:102597930 K03255 "TIF31, CLU1" protein TIF31 -- -- KOG1839 "Uncharacterized protein CLU1/cluA/TIF31 involved in mitochondrial morphology/distribution, also found associated with eIF-3" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XQUQ Involved in proper cytoplasmic distribution of mitochondria (By similarity) Biological Process: cell cycle (GO:0007049);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: response to abscisic acid (GO:0009737); -- -- TRINITY_DN10260_c0_g1_i1 8.758250619 17.51650124 0 0 #NAME? 0.004339255 0.018791433 Down 3.788699 4.157696 0 0 0 0 ACU15064.1 unknown [Glycine max] Q8LD26|DRMH3_ARATH Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g56220 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YZ0W Dormancy auxin associated -- -- -- TRINITY_DN10286_c0_g1_i1 84.36509151 168.730183 0 0 #NAME? 1.19E-52 1.40E-50 Down 7.843942 7.344928 7.247906 0 0 0 XP_012831975.1 PREDICTED: WAT1-related protein At2g37460-like [Erythranthe guttata] Q9ZUS1|WTR13_ARATH WAT1-related protein At2g37460 OS=Arabidopsis thaliana OX=3702 GN=At2g37460 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBPN Auxin-induced protein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); PF00892.19 EamA-like transporter family TRINITY_DN10293_c0_g1_i1 6.489754528 0 12.97950906 Inf Inf 4.42E-05 0.000316303 Up 0 0 0 1.462389 2.921606 2.193007 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10296_c0_g1_i1 19.62462472 2.391659921 36.85758952 15.41088229 3.945877555 1.04E-07 1.14E-06 Up 0.3190588 0.7843852 0.25329 7.757621 3.520402 5.841778 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10298_c0_g1_i1 17.88396473 8.132529875 27.63539959 3.398130718 1.764741351 0.023017606 0.075922201 Up 2.370157 0.9304539 0.3652135 1.33679 4.042818 4.686902 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10299_c0_g1_i1 15.22151667 28.12830327 2.31473008 0.082291849 -3.603106654 6.47E-06 5.42E-05 Down 6.224247 3.926566 3.817128 0 0 0.9676655 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10314_c0_g1_i1 26.67621305 51.83282582 1.519600276 0.029317334 -5.092102265 2.93E-13 5.92E-12 Down 2.759779 1.988431 2.291246 0 0.03941563 0.1289159 XP_011089981.1 agmatine coumaroyltransferase-2 [Sesamum indicum] Q7XPK7|AHT1_ORYSJ Agmatine hydroxycinnamoyltransferase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=AHT1 PE=1 SV=1 sind:105170772 K13065 "E2.3.1.133, HCT" shikimate O-hydroxycinnamoyltransferase ko00940|ko00945|ko00941 "Phenylpropanoid biosynthesis|Stilbenoid, diarylheptanoid and gingerol biosynthesis|Flavonoid biosynthesis" -- -- -- -- -- S ENOG410XTI7 Transferase family Molecular Function: hydroxycinnamoyltransferase activity (GO:0050734); PF02458.14 Transferase family TRINITY_DN10328_c0_g1_i1 10.92935646 21.85871293 0 0 #NAME? 0.007098946 0.02859548 Down 1.938457 3.494526 0 0 0 0 KHN38354.1 "Oxygen-evolving enhancer protein 2, chloroplastic [Glycine soja]" P16059|PSBP_PEA "Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum OX=3888 GN=PSBP PE=1 SV=1" gmx:100813388 K02717 psbP photosystem II oxygen-evolving enhancer protein 2 ko00195 Photosynthesis -- -- -- -- -- S ENOG4110ARY Oxygen-evolving enhancer protein 2 Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: photosystem II oxygen evolving complex (GO:0009654);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: extrinsic component of membrane (GO:0019898); PF01789.15 PsbP TRINITY_DN10333_c0_g1_i1 9.337815237 4.160699294 14.51493118 3.48857972 1.802639802 0.040725718 0.120379143 Up 1.570828 0 0.5921068 1.684335 2.07769 2.243245 XP_011078802.1 fatty acyl-CoA reductase 2 [Sesamum indicum] -- -- sind:105162476 K13356 FAR alcohol-forming fatty acyl-CoA reductase ko00073|ko04146 "Cutin, suberine and wax biosynthesis|Peroxisome" -- -- -- -- -- S ENOG410XS7R fatty-acyl-CoA reductase (alcohol-forming) activity -- -- -- TRINITY_DN10341_c0_g2_i1 11.73763081 0.651223126 22.8240385 35.04795452 5.131258343 0.001133 0.005829114 Up 0.3155394 1.83E-40 6.71E-08 0.5074216 3.634832 4.300234 PIN20308.1 hypothetical protein CDL12_06988 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111CVP NA -- -- -- TRINITY_DN10343_c0_g1_i1 6.208893311 11.64620993 0.771576693 0.066251313 -3.915907154 0.003868133 0.016996047 Down 1.248733 2.198382 0.8982 0 6.88E-68 0.1849534 KZV21584.1 peroxidase 64 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YP2B Retroviral aspartyl protease -- "PF08284.10,PF13975.5" Retroviral aspartyl protease|gag-polyprotein putative aspartyl protease TRINITY_DN10343_c0_g3_i1 3.676923539 7.353847077 0 0 #NAME? 0.021378267 0.07147556 Down 2.626299 1.856631 4.37E-13 0 2.55E-67 5.79E-97 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10347_c0_g1_i1 7.06238193 14.12476386 0 0 #NAME? 5.40E-05 0.000380147 Down 1.13251 2.63086 1.352029 0 0 0 KYP47726.1 Transposon TX1 uncharacterized [Cajanus cajan] P92555|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN10351_c0_g1_i1 3.159141626 6.318283252 0 0 #NAME? 0.015797418 0.055726778 Down 1.454829 1.858309 0.7523098 0 0 0 XP_023920489.1 receptor-like protein EIX2 [Quercus suber] -- -- -- -- -- -- -- -- -- -- -- -- -- T ENOG41102Z7 receptor protein kinase -- "PF12799.6,PF13855.5" Leucine Rich repeats (2 copies)|Leucine rich repeat TRINITY_DN10352_c0_g1_i1 4.09308986 8.186179719 0 0 #NAME? 0.003876702 0.017023813 Down 1.343844 1.638491 1.284702 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10354_c1_g1_i1 8.123956802 13.98802101 2.259892593 0.161559136 -2.629865756 0.009843354 0.037579426 Down 1.659563 2.460008 2.575092 0.3611832 0 0.3875481 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10355_c0_g1_i1 18.2143402 26.74584679 9.682833612 0.362031297 -1.465813672 0.01781406 0.061535166 Down 2.871182 4.145048 3.878107 1.18427 0.8001471 1.165647 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10366_c0_g1_i1 13.0501842 23.51761552 2.582752871 0.109822055 -3.186760279 0.001124562 0.005790953 Down 3.241522 5.591253 1.929929 1.66E-53 0.6260948 0.3269732 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10371_c0_g1_i1 15.56649286 25.33722195 5.795763768 0.228745037 -2.128187654 0.00288782 0.013230401 Down 3.830252 3.654744 3.521654 2.96E-94 2.052673 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10379_c0_g1_i1 11.05689532 16.80414959 5.309641042 0.315972017 -1.662131298 0.037249883 0.112090418 Down 1.549519 4.558407 3.591264 0.8040918 0 1.580639 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10380_c0_g1_i1 8.573787565 13.33679789 3.810777245 0.285734048 -1.807255138 0.049729165 0.141093566 Down 0.8536192 1.482473 1.53065 0.00011104 0.1524526 0.7593445 XP_011090870.1 uncharacterized protein LOC105171448 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10388_c0_g1_i1 15.04065151 0.624179352 29.45712366 47.19336448 5.560512122 9.16E-07 8.84E-06 Up 0 0.151941 0 0.9489338 2.711395 2.848349 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10390_c0_g1_i1 35.74302858 49.86295465 21.6231025 0.433650646 -1.205394836 0.006156784 0.025293594 Down 6.604121 5.966417 5.181124 2.846811 1.149955 2.199472 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10391_c0_g1_i1 6.017624636 1.740436795 10.29481248 5.915074023 2.564396223 0.029715838 0.093497679 Up 0 0.7868756 0.2398557 1.777929 2.161811 0.7514695 KYP57718.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN10403_c0_g1_i1 18.85171998 2.184627732 35.51881222 16.25851934 4.023123972 1.52E-08 1.87E-07 Up 0 1.06136 0 3.767582 6.681549 4.256909 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z97W NA -- PF17440.1 Thiol-activated cytolysin beta sandwich domain TRINITY_DN10407_c0_g1_i1 12.16179532 22.85355391 1.470036737 0.064324207 -3.958494418 0.047318395 0.135549913 Down 1.07E-80 8.028979 4.120964 0.6580409 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10409_c0_g1_i1 6.605062769 0 13.21012554 Inf Inf 0.004694898 0.020093862 Up 0 0 0 2.380177 0 3.161742 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10427_c0_g1_i1 162.3753742 319.971031 4.779717395 0.014937969 -6.064872164 3.45E-81 7.16E-79 Down 48.33478 46.13317 41.70592 0 1.291017 0.3406431 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10430_c0_g1_i1 16.01576692 23.59254645 8.438987392 0.357697182 -1.483189341 0.03288365 0.101619412 Down 4.022646 5.637417 2.711551 1.012661 1.986904 0.497046 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10436_c0_g1_i1 8.888276774 17.40904436 0.367509184 0.021110245 -5.565912896 2.85E-05 0.000211778 Down 1.597922 2.256432 1.874443 0.1203283 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10436_c0_g2_i1 18.39814696 35.70958821 1.086705707 0.030431762 -5.038278299 2.79E-09 3.78E-08 Down 2.691641 2.482668 2.252086 0 0.1964295 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10440_c0_g1_i1 9.265833651 2.765158638 15.76650866 5.701845979 2.511429069 0.008806928 0.034274083 Up 0.2730176 0.1315742 0.4143738 0.9019902 0.8510781 1.907011 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10450_c0_g1_i1 14.02198967 20.92316212 7.12081722 0.34033179 -1.554986176 0.031850803 0.099014074 Down 1.931435 2.33391 1.583791 0.3903767 0.3825119 0.7796718 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10454_c0_g1_i1 4.845603165 0.738117137 8.953089193 12.12963193 3.600463868 0.018577861 0.063762864 Up 0 1.13E-49 0.4411708 1.568883 1.056004 1.660612 -- -- -- -- sind:105159745 K06617 E2.4.1.82 raffinose synthase ko00052 Galactose metabolism -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10462_c0_g1_i1 167.8826645 51.2669379 284.4983911 5.549354083 2.472319859 1.28E-21 4.63E-20 Up 9.755552 9.430069 9.847957 37.23342 51.19522 41.74783 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10466_c0_g1_i2 12.69253714 25.38507429 0 0 #NAME? 0.000102682 0.000679255 Down 1.027892 4.107286 2.017201 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10468_c0_g1_i1 33.48149606 66.96299212 0 0 #NAME? 1.86E-21 6.73E-20 Down 11.23853 14.11061 9.873502 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10470_c0_g1_i1 18.81888104 29.29665175 8.341110329 0.284712069 -1.812424445 0.003203804 0.014454851 Down 2.774586 3.727383 3.122346 0.8271562 0 1.428584 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10475_c0_g1_i1 7.853260612 14.16336784 1.543153387 0.108953845 -3.198210982 0.002847218 0.013077384 Down 0.9720204 0.8063981 1.801018 0 0 0.2849175 BAV56707.1 transposase [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z2X5 "CACTA, En Spm sub-class" -- "PF13960.5,PF13963.5" Domain of unknown function (DUF4218)|Transposase-associated domain TRINITY_DN10482_c0_g1_i1 19.79310819 0 39.58621637 Inf Inf 2.90E-14 6.28E-13 Up 0 0 0 2.521823 2.842861 4.172865 XP_012843198.1 PREDICTED: pathogenesis-related protein STH-2-like [Erythranthe guttata] Q40280|MAL12_MALDO Major allergen Mal d 1 OS=Malus domestica OX=3750 PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YZ38 Pathogenesis-related protein Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607); PF00407.18 Pathogenesis-related protein Bet v I family TRINITY_DN10485_c0_g1_i1 33.72526061 11.88916619 55.56135503 4.673276001 2.224434244 1.92E-06 1.76E-05 Up 1.232845 0.6126644 0.9493897 4.145486 2.362269 3.994981 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10499_c0_g1_i1 12.50972174 18.7327717 6.286671774 0.335597523 -1.575196029 0.045103722 0.130523603 Down 3.718109 1.722926 1.908572 1.30782 0.3250315 0.3549476 XP_016438238.1 PREDICTED: aquaporin NIP6-1-like isoform X2 [Nicotiana tabacum] Q9SAI4|NIP61_ARATH Aquaporin NIP6-1 OS=Arabidopsis thaliana OX=3702 GN=NIP6-1 PE=1 SV=1 sind:105158323 K09874 NIP aquaporin NIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Cellular Component: plasma membrane (GO:0005886);|Biological Process: water transport (GO:0006833);|Molecular Function: glycerol transmembrane transporter activity (GO:0015168);|Molecular Function: urea transmembrane transporter activity (GO:0015204);|Molecular Function: channel activity (GO:0015267);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: borate transport (GO:0046713);|Molecular Function: active borate transmembrane transporter activity (GO:0046715);|Biological Process: cellular response to boron-containing substance levels (GO:0080029); PF00230.19 Major intrinsic protein TRINITY_DN10501_c0_g1_i2 44.65536636 70.65161612 18.6591166 0.264100351 -1.920841877 1.53E-06 1.42E-05 Down 2.526709 2.812164 3.109966 0.3613945 0.6482703 0.7992624 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10503_c0_g1_i1 16.2578611 32.51572221 0 0 #NAME? 1.18E-10 1.87E-09 Down 7.917173 8.5084 3.992412 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10506_c0_g1_i1 31.59601408 63.19202816 0 0 #NAME? 1.99E-20 6.70E-19 Down 11.79463 8.157174 11.24922 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10507_c0_g1_i2 8.101186211 16.20237242 0 0 #NAME? 9.47E-06 7.70E-05 Down 1.495618 2.167427 3.172886 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10527_c0_g2_i1 5.926060509 11.85212102 0 0 #NAME? 0.001059918 0.005501128 Down 2.162796 1.679129 0.327742 0 6.66E-98 0 PIN26155.1 Tripeptidyl-peptidase II [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10535_c0_g1_i1 12.49143407 2.724592978 22.25827516 8.169394601 3.03022917 0.000308839 0.001837609 Up 0 0.2787694 0.3634945 1.40801 1.644529 1.420445 PIM97624.1 H+/oligopeptide symporter [Handroanthus impetiginosus] Q9LQL2|PTR14_ARATH Protein NRT1/ PTR FAMILY 7.3 OS=Arabidopsis thaliana OX=3702 GN=NPF7.3 PE=1 SV=2 sind:105167169 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Biological Process: leaf senescence (GO:0010150);|Biological Process: response to nitrate (GO:0010167);|Molecular Function: nitrate transmembrane transporter activity (GO:0015112);|Molecular Function: symporter activity (GO:0015293);|Molecular Function: potassium:proton antiporter activity (GO:0015386);|Biological Process: nitrate transport (GO:0015706);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: potassium ion homeostasis (GO:0055075);|Biological Process: proton transmembrane transport (GO:1902600); PF00854.20 POT family TRINITY_DN10535_c0_g2_i1 8.299578799 0.984156182 15.61500142 15.86638553 3.987901605 0.000571456 0.003180492 Up 0 0 0.3658857 2.145862 1.284795 1.659985 XP_011085074.1 protein NRT1/ PTR FAMILY 7.3 isoform X2 [Sesamum indicum] Q9LQL2|PTR14_ARATH Protein NRT1/ PTR FAMILY 7.3 OS=Arabidopsis thaliana OX=3702 GN=NPF7.3 PE=1 SV=2 sind:105167169 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Biological Process: leaf senescence (GO:0010150);|Biological Process: response to nitrate (GO:0010167);|Molecular Function: nitrate transmembrane transporter activity (GO:0015112);|Molecular Function: symporter activity (GO:0015293);|Molecular Function: potassium:proton antiporter activity (GO:0015386);|Biological Process: nitrate transport (GO:0015706);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: potassium ion homeostasis (GO:0055075);|Biological Process: proton transmembrane transport (GO:1902600); PF00854.20 POT family TRINITY_DN10536_c0_g1_i1 13.85602518 27.34454118 0.367509184 0.013439947 -6.21732874 2.96E-08 3.52E-07 Down 2.478018 2.863204 3.004488 0.08045938 0 0 XP_011070477.1 46 kDa FK506-binding nuclear protein [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41116DF NA -- -- -- TRINITY_DN10545_c0_g1_i1 6.033421159 0.651223126 11.41561919 17.52950523 4.131713372 0.001759338 0.008599292 Up 0.2997331 0 0 2.016771 1.985411 0.9270623 XP_012853343.1 PREDICTED: scarecrow-like protein 23 [Erythranthe guttata] Q9LDL7|PAT1_ARATH Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBEA GRAS domain family "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: red, far-red light phototransduction (GO:0009585);|Biological Process: photomorphogenesis (GO:0009640);|Molecular Function: sequence-specific DNA binding (GO:0043565);" PF03514.13 GRAS domain family TRINITY_DN10559_c0_g1_i1 63.5214845 127.042969 0 0 #NAME? 5.03E-40 4.04E-38 Down 19.72271 22.1205 19.86024 0 0 0 PQM38675.1 hypothetical protein Pyn_15137 [Prunus yedoensis var. nudiflora] P83241|IP23_CAPAN Proteinase inhibitor PSI-1.2 OS=Capsicum annuum OX=4072 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z7Y9 Potato type II proteinase inhibitor family Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867); -- -- TRINITY_DN10587_c0_g1_i1 25.8406613 10.24334778 41.43797481 4.045354674 2.016266195 8.77E-05 0.000588543 Up 0.9678769 2.78188 0.7333664 4.543315 6.164208 3.98436 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10588_c0_g1_i1 24.50114997 49.00229995 0 0 #NAME? 4.51E-16 1.13E-14 Down 3.88743 4.952075 5.771255 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10603_c0_g2_i1 36.14206806 20.62723941 51.65689672 2.504304899 1.324410221 0.038304637 0.114563149 Up 0.5286853 5.057996 2.165428 3.779994 4.304943 7.438019 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10612_c0_g1_i1 15.85976575 22.7875381 8.931993397 0.391968336 -1.351190979 0.037410062 0.112479328 Down 3.137029 4.572532 6.194896 0.8996261 1.815668 1.736342 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10618_c0_g1_i1 9.912487399 0.624179352 19.20079545 30.76166391 4.943061636 7.59E-06 6.28E-05 Up 0 0.2542632 0 2.036192 2.137 1.182347 XP_011072201.1 uncharacterized protein LOC105157495 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10621_c0_g1_i1 11.58713909 23.17427819 0 0 #NAME? 5.35E-07 5.35E-06 Down 4.838826 3.926779 1.706765 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10629_c0_g1_i1 41.88162237 60.68347003 23.07977471 0.380330503 -1.394674444 0.011068881 0.041391359 Down 9.86293 6.890951 4.12843 2.400156 1.680935 2.258321 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10631_c0_g1_i1 36.82044658 18.36463279 55.27626038 3.009930065 1.589729967 0.000301933 0.001802379 Up 4.179238 1.121048 4.510534 10.29541 6.950421 7.104952 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10634_c0_g1_i2 8.401050169 14.17997251 2.622127829 0.184917695 -2.435044812 0.01331751 0.048401867 Down 0.8518002 2.282716 2.093745 0.2875144 0.1425248 0.3245549 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10647_c0_g1_i1 13.91149401 21.12979143 6.693196599 0.316765862 -1.65851123 0.030706979 0.096063535 Down 3.030192 0.8955737 3.325818 0.6145166 0.6126314 0.6972774 XP_022862348.1 protein phosphatase 2C 70-like [Olea europaea var. sylvestris] P46014|P2C70_ARATH Protein phosphatase 2C 70 OS=Arabidopsis thaliana OX=3702 GN=KAPP PE=1 SV=2 cit:102613902 K01090 E3.1.3.16 protein phosphatase -- -- -- -- -- -- -- -- -- -- Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: [pyruvate kinase]-phosphatase activity (GO:0050408); -- -- TRINITY_DN10675_c0_g1_i1 2.750296799 5.500593598 0 0 #NAME? 0.029067051 0.091863862 Down 1.199739 1.737053 0.4684353 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10684_c0_g1_i1 5.627273868 11.25454774 0 0 #NAME? 0.000438353 0.002510493 Down 1.140908 2.244681 1.048968 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10685_c0_g1_i1 24.48219194 48.19280719 0.771576693 0.016010204 -5.964864464 1.22E-13 2.55E-12 Down 8.42579 5.247936 7.055548 0 0 0.2975382 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10686_c0_g1_i2 9.856034692 15.21865394 4.493415442 0.295257088 -1.759956403 0.045689328 0.131881829 Down 2.197371 0.8329344 1.426408 0.0993077 0.3919207 0.5332476 XP_009396708.1 PREDICTED: uncharacterized protein At4g06744-like [Musa acuminata subsp. malaccensis] Q8W3M4|Y4744_ARATH Uncharacterized protein At4g06744 OS=Arabidopsis thaliana OX=3702 GN=At4g06744 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Cellular Component: extracellular region (GO:0005576); -- -- TRINITY_DN10689_c0_g1_i1 19.54902688 28.70375488 10.39429887 0.362123315 -1.465447028 0.013256916 0.048224215 Down 1.924693 1.293541 2.32481 0.6612935 0.4354927 0.469033 OTG14868.1 "putative zinc finger, CCHC-type [Helianthus annuus]" Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN10690_c0_g1_i2 328.1006553 188.8717019 467.3296086 2.474323066 1.307033882 7.01E-19 2.13E-17 Up 28.26263 27.57584 20.00764 46.0055 53.91764 51.6871 PLY67308.1 hypothetical protein LSAT_8X142920 [Lactuca sativa] P82353|NLTP2_PRUAR Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Biological Process: lipid transport (GO:0006869);|Molecular Function: lipid binding (GO:0008289); -- -- TRINITY_DN10694_c0_g1_i1 10.33295075 4.405179536 16.26072197 3.691273384 1.884118591 0.024485886 0.079882695 Up 0.2213609 0.3725078 0.2230882 0.6865178 1.175043 0.6719077 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10695_c0_g1_i1 37.55246033 62.94127788 12.16364277 0.193253826 -2.371431117 6.57E-05 0.00045326 Down 8.715599 18.91244 12.75844 2.50068 2.524977 1.242853 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10697_c0_g1_i1 22.42777751 11.86832281 32.98723222 2.779435035 1.474791662 0.009044349 0.035056795 Up 2.777561 1.351714 1.462445 3.117155 3.161936 6.129581 PIN06019.1 hypothetical protein CDL12_21442 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10699_c0_g1_i1 10.43897744 20.87795487 0 0 #NAME? 3.79E-07 3.87E-06 Down 1.780323 2.310162 1.969787 0 0 0 XP_011073053.2 "LOW QUALITY PROTEIN: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2-like [Sesamum indicum]" -- -- -- -- -- -- -- -- KOG4698 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG410ZHQA glycosyltransferase -- PF04577.13 Protein of unknown function (DUF563) TRINITY_DN10699_c0_g2_i1 7.030136017 14.06027203 0 0 #NAME? 5.56E-05 0.000389867 Down 2.219186 2.403404 1.930502 0 0 0 PIN23282.1 protein O-GlcNAc transferase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG4698 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG410ZHQA glycosyltransferase -- -- -- TRINITY_DN10701_c0_g1_i2 12.48940196 24.97880393 0 0 #NAME? 2.14E-08 2.59E-07 Down 5.356876 3.708299 3.836875 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10701_c1_g1_i1 10.02570987 20.05141974 0 0 #NAME? 4.15E-05 0.000298605 Down 6.173484 1.54578 4.289656 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10702_c0_g1_i2 6.261344752 11.05019545 1.472494053 0.133255023 -2.907738175 0.016634036 0.058095621 Down 0.4899587 1.671197 1.409879 0 0.2463849 0.1327617 XP_011083674.1 zinc-finger homeodomain protein 5 [Sesamum indicum] Q53N87|ZHD4_ORYSJ Zinc-finger homeodomain protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD4 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN10703_c0_g1_i1 13.32481469 19.56818713 7.081442262 0.361885453 -1.466394979 0.047621865 0.136250962 Down 2.208128 2.902491 2.128229 0.235549 0.9294762 0.9083807 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10712_c0_g1_i1 6.560731079 11.96409712 1.15736504 0.096736513 -3.36979565 0.010914833 0.040892787 Down 3.376793 0.4717103 2.949135 0 0 0.5164323 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10713_c0_g2_i1 6.388892492 2.013519615 10.76426537 5.34599479 2.418458432 0.034213232 0.10486307 Up 0.3454962 0.3286435 0.535186 1.724582 2.137695 1.89079 BAL46523.1 hypothetical protein [Gentiana scabra x Gentiana triflora] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN10715_c0_g1_i1 11.02562018 4.378135762 17.67310459 4.036673495 2.0131669 0.013445738 0.048790245 Up 0.2376087 1.173694 0.546107 1.936182 3.311754 1.312591 PIN12567.1 hypothetical protein CDL12_14816 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111KKZ NA -- -- -- TRINITY_DN10718_c0_g1_i2 8.445758009 2.558126449 14.33338957 5.603080947 2.486220335 0.04594569 0.132445081 Up 0.2040213 0.5982424 0.4751036 1.989241 0.3955857 3.209749 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10720_c0_g2_i1 7.050075217 12.65120949 1.448940942 0.114529836 -3.126204619 0.007549337 0.030089301 Down 1.057066 2.256342 1.791474 0 0.4308949 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10726_c0_g1_i1 8.648060871 15.8366329 1.45948884 0.092159037 -3.439730546 0.001329895 0.006719491 Down 1.517971 0.9370324 1.429313 0.1525365 0.1512247 1.38E-12 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10736_c0_g1_i2 23.16067771 46.32135541 0 0 #NAME? 3.57E-15 8.38E-14 Down 2.582267 3.768713 3.494378 8.96E-19 7.93E-73 4.90E-45 XP_022852785.1 RING-H2 finger protein ATL48-like isoform X2 [Olea europaea var. sylvestris] Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2 -- -- -- -- -- -- KOG4431 "Uncharacterized protein, induced by hypoxia " [R] POORLY CHARACTERIZED General function prediction only S ENOG41121ET "HIG1 hypoxia inducible domain family, member" Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transferase activity (GO:0016740);|Molecular Function: ubiquitin protein ligase binding (GO:0031625);|Molecular Function: metal ion binding (GO:0046872); PF04588.12 Hypoxia induced protein conserved region TRINITY_DN10741_c0_g1_i1 17.34213439 26.11942524 8.56484353 0.327910873 -1.608624355 0.015105045 0.053668073 Down 4.532201 3.330707 2.208123 1.52476 0.2999424 0.869403 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10744_c0_g1_i1 13.43600079 6.519115048 20.35288654 3.122032114 1.642485378 0.026282283 0.084624179 Up 0.4835354 0.588928 0.7456814 1.548348 1.779255 1.190664 XP_011090870.1 uncharacterized protein LOC105171448 [Sesamum indicum] Q9FJ30|FBL88_ARATH Putative F-box/LRR-repeat protein At5g41840 OS=Arabidopsis thaliana OX=3702 GN=At5g41840 PE=4 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10748_c0_g1_i1 7.836288838 13.39440592 2.278171756 0.170083822 -2.555682171 0.016346393 0.0573292 Down 1.940575 1.544465 0.6937682 0.1749975 0 0.3813797 XP_012835624.1 PREDICTED: probable serine/threonine-protein kinase WNK4 [Erythranthe guttata] Q6EU49|WNK4_ORYSJ Probable serine/threonine-protein kinase WNK4 OS=Oryza sativa subsp. japonica OX=39947 GN=WNK4 PE=2 SV=1 sind:105173068 K08867 "WNK, PRKWNK" WNK lysine deficient protein kinase -- -- KOG0584 Serine/threonine protein kinase [R] POORLY CHARACTERIZED General function prediction only T ENOG410XQWZ WNK lysine deficient protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: intracellular signal transduction (GO:0035556); -- -- TRINITY_DN10751_c0_g1_i1 15.73043197 25.11162341 6.349240526 0.252840703 -1.983699361 0.01681833 0.058604013 Down 3.44113 1.168983 4.552232 0.5763133 0.5733511 0.8532203 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10755_c0_g1_i3 62.92821248 88.30109403 37.55533093 0.425309917 -1.233413602 0.000253704 0.001540427 Down 10.05047 7.769662 5.884668 2.487928 2.684273 2.917297 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10761_c0_g1_i1 14.71339709 2.359974558 27.06681962 11.469115 3.519682167 1.29E-05 0.000102252 Up 0.1905461 0.1835651 0.7221536 2.708476 4.013288 3.187683 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10762_c0_g1_i1 6.702623952 13.4052479 0 0 #NAME? 0.007107534 0.028619915 Down 2.805369 2.448234 0 0 0 0 KHN33514.1 "Chlorophyll a-b binding protein CP24 10A, chloroplastic [Glycine soja]" P27524|CB4A_SOLLC "Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAP10A PE=3 SV=1" gmx:100527463 K08917 LHCB6 light-harvesting complex II chlorophyll a/b binding protein 6 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- S ENOG410ZGWX Chlorophyll A-B binding protein "Biological Process: response to light stimulus (GO:0009416);|Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis, light harvesting in photosystem I (GO:0009768);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: plastoglobule (GO:0010287);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);" PF00504.20 Chlorophyll A-B binding protein TRINITY_DN10773_c0_g1_i1 19.1615907 8.214344594 30.1088368 3.665397337 1.873969598 0.003154497 0.01426074 Up 0.4932712 1.442956 2.230762 3.744596 4.37853 4.424345 PIN10846.1 hypothetical protein CDL12_16554 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111AVX NA -- PF05553.10 Cotton fibre expressed protein TRINITY_DN10776_c0_g3_i1 21.99318716 32.31448753 11.67188678 0.361196716 -1.469143318 0.009939684 0.037870747 Down 3.510925 2.132368 2.025763 0.5578903 0.40697 1.306745 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1077_c0_g1_i1 4.243932558 8.487865117 0 0 #NAME? 0.025372687 0.082186362 Down 3.419811 0 1.798369 0 0 0 XP_012845857.1 PREDICTED: uncharacterized protein LOC105965855 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10789_c0_g1_i1 71.63732366 31.38550517 111.8891421 3.564994144 1.833899707 3.00E-09 4.05E-08 Up 3.031456 5.554047 2.729984 10.02501 10.97751 11.35831 XP_022869417.1 uncharacterized protein LOC111388838 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z68U NA -- -- -- TRINITY_DN10794_c0_g1_i1 24.69782127 43.78915164 5.606490893 0.128033787 -2.965403525 4.50E-07 4.54E-06 Down 8.472412 9.012972 7.698132 1.010204 0.5177474 1.161304 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10795_c0_g1_i1 980.8292908 1636.764531 324.8940504 0.198497734 -2.332805557 1.31E-79 2.65E-77 Down 239.9223 226.1211 202.8877 37.29493 33.36954 36.61513 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1079_c0_g1_i1 2.38567838 4.771356759 0 0 #NAME? 0.047131608 0.135168377 Down 1.057225 0.3387081 0.5355328 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10800_c0_g1_i1 218.6552927 304.2477758 133.0628096 0.437350147 -1.193139315 3.19E-11 5.37E-10 Down 31.52737 31.16951 33.3531 9.349041 12.50338 12.08413 XP_022868152.1 nudix hydrolase 1-like [Olea europaea var. sylvestris] Q9CA40|NUDT1_ARATH Nudix hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=NUDT1 PE=1 SV=1 sind:105156429 K03574 "mutT, NUDT15, MTH2" 8-oxo-dGTP diphosphatase -- -- -- -- -- -- -- F COG1051 NUDiX hydrolase "Molecular Function: NAD+ diphosphatase activity (GO:0000210);|Cellular Component: cytosol (GO:0005829);|Biological Process: dGTP catabolic process (GO:0006203);|Biological Process: cellular response to DNA damage stimulus (GO:0006974);|Molecular Function: 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity (GO:0008413);|Molecular Function: dihydroneopterin triphosphate pyrophosphohydrolase activity (GO:0019177);|Molecular Function: 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity (GO:0035539);|Molecular Function: metal ion binding (GO:0046872);" PF00293.27 NUDIX domain TRINITY_DN10801_c0_g1_i1 3.595606943 0.558128722 6.633085163 11.88450783 3.571010254 0.041776 0.122875524 Up 0 0.2132404 0.1682424 1.119641 0.9218633 0.4382373 XP_010938192.1 PREDICTED: transcription factor MYB108-like [Elaeis guineensis] Q2QZJ8|JAMYB_ORYSJ Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=2 SV=1 cic:CICLE_v10005387mg K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein Cellular Component: nucleus (GO:0005634);|Biological Process: defense response (GO:0006952);|Molecular Function: sequence-specific DNA binding (GO:0043565); -- -- TRINITY_DN10811_c0_g1_i2 10.90979185 21.81958371 0 0 #NAME? 7.38E-07 7.23E-06 Down 2.715718 3.119259 6.182033 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10814_c0_g1_i1 11.21709968 22.43419937 0 0 #NAME? 1.38E-07 1.49E-06 Down 3.359702 1.769993 2.044504 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10814_c0_g2_i1 12.28000001 0 24.56000003 Inf Inf 4.30E-09 5.69E-08 Up 0 0 0 1.204031 1.226083 1.424938 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10815_c0_g1_i1 15.57363844 22.69528428 8.451992606 0.372411841 -1.425029149 0.043026524 0.12577133 Down 2.334155 3.550776 1.589987 0.4542172 1.356776 0.4514585 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10815_c1_g1_i1 28.7665917 43.60140403 13.93177938 0.319525935 -1.645995061 0.000823531 0.00439923 Down 6.157848 9.635486 7.265461 1.776277 0.9047825 3.393567 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10817_c0_g1_i1 12.19862222 5.230190683 19.16705375 3.664695021 1.873693141 0.023750302 0.077874707 Up 0.1804262 0.5224044 0.7538529 2.129112 1.357287 0.6820009 PIN19102.1 hypothetical protein CDL12_08213 [Handroanthus impetiginosus] O23160|MYB73_ARATH Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1 -- -- -- -- -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: response to ethylene (GO:0009723);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: response to jasmonic acid (GO:0009753);|Biological Process: response to chitin (GO:0010200);|Biological Process: positive regulation of auxin mediated signaling pathway (GO:0010929);|Biological Process: glucosinolate metabolic process (GO:0019760);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: response to cadmium ion (GO:0046686);|Biological Process: negative regulation of response to salt stress (GO:1901001);" "PF00249.30,PF13921.5" Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN1081_c0_g1_i1 4.528199058 9.056398117 0 0 #NAME? 0.002060397 0.009883506 Down 0.9934853 1.543293 1.062968 0 0 0 AIC49126.1 "LDHB, partial [synthetic construct]" P22988|LDHA_HORVU L-lactate dehydrogenase A OS=Hordeum vulgare OX=4513 PE=1 SV=1 smo:SELMODRAFT_236713 K00016 "LDH, ldh" L-lactate dehydrogenase ko00640|ko00620|ko00270|ko00010 Propanoate metabolism|Pyruvate metabolism|Cysteine and methionine metabolism|Glycolysis / Gluconeogenesis KOG1495 Lactate dehydrogenase [C] METABOLISM Energy production and conversion C COG0039 Catalyzes the reversible oxidation of malate to oxaloacetate (By similarity) Molecular Function: L-lactate dehydrogenase activity (GO:0004459);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: carboxylic acid metabolic process (GO:0019752); PF02866.17 "lactate/malate dehydrogenase, alpha/beta C-terminal domain" TRINITY_DN10827_c0_g1_i1 31.04119136 8.831202452 53.25118026 6.029890103 2.592131709 2.40E-07 2.52E-06 Up 0.726166 1.265078 1.228977 4.520542 4.953708 5.825789 XP_011087146.1 uncharacterized protein LOC105168709 [Sesamum indicum] F4JIJ7|BH162_ARATH Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YMWG HLH "Molecular Function: RNA polymerase II regulatory region sequence-specific DNA binding (GO:0000977);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: regulation of transcription by RNA polymerase II (GO:0006357);|Molecular Function: transcription factor binding (GO:0008134);|Molecular Function: protein dimerization activity (GO:0046983);|Biological Process: defense response to fungus (GO:0050832);|Cellular Component: RNA polymerase II transcription factor complex (GO:0090575);" -- -- TRINITY_DN10829_c1_g1_i1 8.118971357 2.703749597 13.53419312 5.005712486 2.323575429 0.042582127 0.124729334 Up 0.227116 0.653686 0.174861 1.981885 2.221558 0.2366768 AAS86319.1 gamma-curcumene synthase [Pogostemon cablin] Q49SP7|TPSCS_POGCB Gamma-curcumene synthase OS=Pogostemon cablin OX=28511 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: cytosol (GO:0005829);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate metabolic process (GO:0045338);|Biological Process: sesquiterpene biosynthetic process (GO:0051762);|Molecular Function: gamma-curcumene synthase activity (GO:0102064); PF03936.15 "Terpene synthase family, metal binding domain" TRINITY_DN10829_c1_g2_i2 5.681175535 0.246039046 11.11631203 45.18108903 5.49764714 0.000868438 0.00460472 Up 0 0 0.1522405 1.941465 0.8765821 0.9743724 AAS86319.1 gamma-curcumene synthase [Pogostemon cablin] Q49SP7|TPSCS_POGCB Gamma-curcumene synthase OS=Pogostemon cablin OX=28511 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBXH synthase Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: cytosol (GO:0005829);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate metabolic process (GO:0045338);|Biological Process: sesquiterpene biosynthetic process (GO:0051762);|Molecular Function: gamma-curcumene synthase activity (GO:0102064); PF03936.15 "Terpene synthase family, metal binding domain" TRINITY_DN10846_c0_g1_i3 38.08427025 0 76.16854051 Inf Inf 7.22E-27 3.50E-25 Up 0 0 0 7.71677 9.020993 8.783609 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10860_c0_g1_i1 2.823887775 5.64777555 0 0 #NAME? 0.040732971 0.120379692 Down 2.273595 0.7397202 0.29579 2.08E-56 1.39E-46 6.06E-77 GAU50532.1 hypothetical protein TSUD_369590 [Trifolium subterraneum] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF00665.25 Integrase core domain TRINITY_DN10861_c0_g1_i1 3.527420792 7.054841585 0 0 #NAME? 0.019003372 0.064990589 Down 0.2909627 2.571941 0.8821621 0 0 0 KZV39537.1 hypothetical protein F511_32705 [Dorcoceras hygrometricum] Q9SUC3|MS5_ARATH Protein POLLENLESS 3 OS=Arabidopsis thaliana OX=3702 GN=MS5 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4110VSD male sterility MS5 Cellular Component: nucleus (GO:0005634);|Biological Process: male meiotic nuclear division (GO:0007140);|Biological Process: microsporogenesis (GO:0009556);|Biological Process: cell division (GO:0051301);|Biological Process: meiotic cell cycle (GO:0051321); -- -- TRINITY_DN10866_c0_g1_i1 6.87622594 1.85437458 11.8980773 6.416221095 2.681723856 0.020128136 0.068169549 Up 0 0.2185503 0.5135603 1.021031 1.347644 1.350109 XP_011076757.1 7-deoxyloganetic acid glucosyltransferase-like [Sesamum indicum] U3U992|UGT8_CATRO 7-deoxyloganetic acid glucosyltransferase OS=Catharanthus roseus OX=4058 GN=UGT709C2 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glucosyltransferase activity (GO:0035251);|Molecular Function: 7-deoxyloganetic acid glucosyltransferase activity (GO:0102970);|Biological Process: (-)-secologanin biosynthetic process (GO:1900994); -- -- TRINITY_DN10867_c0_g1_i1 5.827335682 10.91965299 0.735018369 0.067311513 -3.893002896 0.004953195 0.021032777 Down 1.684065 1.223873 2.593028 0.240673 0 2.81E-105 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10870_c0_g1_i1 20.71838955 41.43677909 0 0 #NAME? 1.20E-09 1.69E-08 Down 3.734189 5.608744 8.782181 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10874_c0_g1_i1 7.705521572 15.41104314 0 0 #NAME? 0.004201607 0.018265039 Down 4.148766 0.7962548 1.347251 2.75E-64 4.06E-66 1.24E-49 KYP40876.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only K ENOG41128X0 calmodulin-binding transcription activator Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN10875_c0_g1_i1 9.009290364 18.01858073 0 0 #NAME? 3.62E-06 3.16E-05 Down 2.934513 3.321736 1.629011 0 0 0 XP_008783284.1 uncharacterized protein LOC103702572 [Phoenix dactylifera] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF08284.10,PF13975.5" Retroviral aspartyl protease|gag-polyprotein putative aspartyl protease TRINITY_DN10877_c0_g1_i1 19.16593679 30.26812663 8.063746943 0.266410506 -1.908277116 0.009381977 0.03613713 Down 2.050502 2.724449 0.9537285 0.4786448 0.5864814 0.1171407 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10883_c0_g2_i1 52.56634581 33.77676221 71.35592941 2.112574585 1.079002277 0.00232734 0.010961292 Up 3.453456 3.914216 3.96489 6.352484 8.01509 4.958603 EYU43990.1 hypothetical protein MIMGU_mgv1a015287mg [Erythranthe guttata] O50001|PRU1_PRUAR Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YZ38 Pathogenesis-related protein Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607); PF00407.18 Pathogenesis-related protein Bet v I family TRINITY_DN10884_c0_g1_i2 10.88824767 21.77649533 0 0 #NAME? 0.005390894 0.022601723 Down 5.600735 3.622797 0 0 0 0 KHN48094.1 "Ferredoxin, chloroplastic [Glycine soja]" Q9ZTS2|FER_CAPAN "Ferredoxin, chloroplastic OS=Capsicum annuum OX=4072 GN=AP1 PE=1 SV=1" gmx:100305932 K02639 petF ferredoxin ko00195 Photosynthesis -- -- -- -- -- C COG0633 Ferredoxin "Molecular Function: electron transfer activity (GO:0009055);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);" PF00111.26 2Fe-2S iron-sulfur cluster binding domain TRINITY_DN10885_c0_g1_i2 14.24676008 25.49860919 2.994910962 0.117453895 -3.08983354 7.11E-05 0.000486539 Down 1.702992 3.109774 3.854265 0.5408846 0 0.3152181 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10887_c0_g1_i1 9.26276994 3.674383892 14.85115599 4.041808483 2.015000963 0.028406761 0.090210446 Up 0.2526538 0.9707055 0.7839676 2.289509 2.024443 1.944049 XP_012840958.1 PREDICTED: uncharacterized protein LOC105961266 [Erythranthe guttata] Q9ZUZ3|SAU32_ARATH Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1 sind:105174268 K14488 SAUR SAUR family protein ko04075 Plant hormone signal transduction -- -- -- -- -- S ENOG411175A SAUR family Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: auxin-activated signaling pathway (GO:0009734);|Biological Process: regulation of growth (GO:0040008);|Biological Process: regulation of seedling development (GO:1900140); PF02519.13 Auxin responsive protein TRINITY_DN10893_c0_g1_i1 12.63993512 20.48433099 4.795539242 0.234107682 -2.094755821 0.006101108 0.0251063 Down 2.677115 2.192964 5.134418 0.5025316 0.9991084 0.498265 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10903_c0_g1_i1 4.151818996 8.303637992 0 0 #NAME? 0.01597104 0.05622128 Down 2.641905 2.210975 0 0 0 0 KHN46622.1 "Serine hydroxymethyltransferase, mitochondrial [Glycine soja]" P34899|GLYM_PEA "Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum OX=3888 PE=1 SV=1" gmx:100499635 K00600 "glyA, SHMT" glycine hydroxymethyltransferase ko00260|ko00630|ko00460|ko00670 "Glycine, serine and threonine metabolism|Glyoxylate and dicarboxylate metabolism|Cyanoamino acid metabolism|One carbon pool by folate" KOG2467 Glycine/serine hydroxymethyltransferase [E] METABOLISM Amino acid transport and metabolism E COG0112 "Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (By similarity)" Molecular Function: glycine hydroxymethyltransferase activity (GO:0004372);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: glycine biosynthetic process from serine (GO:0019264);|Molecular Function: pyridoxal phosphate binding (GO:0030170);|Biological Process: tetrahydrofolate interconversion (GO:0035999); PF00464.18 Serine hydroxymethyltransferase TRINITY_DN10904_c0_g2_i1 27.36261716 44.91444657 9.810787749 0.218432787 -2.194738671 0.022550764 0.074718746 Down 9.486027 5.859919 2.440359 0.391089 0.7744109 1.966746 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10906_c0_g1_i1 14.28742938 28.57485877 0 0 #NAME? 0.0027896 0.012846536 Down 1.987278 2.844171 6.41E-76 7.01E-55 1.18E-73 7.53E-62 XP_006584499.1 serine hydroxymethyltransferase 3 isoform X1 [Glycine max] P50433|GLYM_SOLTU "Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum OX=4113 PE=2 SV=1" gmx:100499634 K00600 "glyA, SHMT" glycine hydroxymethyltransferase ko00260|ko00630|ko00460|ko00670 "Glycine, serine and threonine metabolism|Glyoxylate and dicarboxylate metabolism|Cyanoamino acid metabolism|One carbon pool by folate" KOG2467 Glycine/serine hydroxymethyltransferase [E] METABOLISM Amino acid transport and metabolism E COG0112 "Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (By similarity)" Molecular Function: glycine hydroxymethyltransferase activity (GO:0004372);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: glycine biosynthetic process from serine (GO:0019264);|Molecular Function: pyridoxal phosphate binding (GO:0030170);|Biological Process: tetrahydrofolate interconversion (GO:0035999); PF00464.18 Serine hydroxymethyltransferase TRINITY_DN10911_c0_g1_i2 26.93601943 51.55730879 2.31473008 0.044896255 -4.477261083 5.93E-09 7.69E-08 Down 3.972404 8.705043 7.958862 0 0 0.7627937 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10914_c0_g1_i1 21.51761524 39.39705629 3.638174202 0.092346346 -3.436801308 1.86E-07 1.97E-06 Down 3.262557 5.282417 4.71869 0.2624641 0.6561804 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10919_c0_g1_i2 14.42775007 5.282719427 23.57278071 4.462243555 2.15776926 0.003566922 0.015847439 Up 0.1045251 0.7070886 0.7420821 1.958822 1.245951 2.549388 XP_022846362.1 uncharacterized protein LOC111369111 [Olea europaea var. sylvestris] Q9FX67|HRS1_ARATH Transcription factor HRS1 OS=Arabidopsis thaliana OX=3702 GN=HRS1 PE=2 SV=1 spen:107007236 K09955 K09955 uncharacterized protein -- -- -- -- -- -- -- S COG3533 Secreted protein "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);|Biological Process: cellular response to phosphate starvation (GO:0016036);|Biological Process: regulation of response to nutrient levels (GO:0032107);|Biological Process: primary root development (GO:0080022);|Biological Process: cellular response to nitrogen compound (GO:1901699);" -- -- TRINITY_DN10921_c0_g1_i1 140.2659591 215.0825056 65.44941271 0.304299099 -1.716438032 8.41E-14 1.77E-12 Down 40.06405 43.88836 35.55502 7.053204 14.10117 8.321994 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10937_c0_g1_i2 15.73142639 23.91195762 7.550895156 0.315779046 -1.663012655 0.014633398 0.052332297 Down 2.914003 4.615787 2.593858 0 0.8191504 1.666306 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10945_c0_g2_i1 18.40050463 36.80100926 0 0 #NAME? 0.000171144 0.001079742 Down 1.461289 12.31974 7.780223 1.79E-87 2.68E-56 7.65E-71 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10956_c0_g1_i2 16.8468346 33.69366921 0 0 #NAME? 2.62E-11 4.45E-10 Down 2.984929 3.795076 5.506142 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10963_c0_g1_i1 93.6885735 187.377147 0 0 #NAME? 3.24E-58 4.36E-56 Down 3.193729 3.479684 3.045608 0 0 0 APB87341.1 large protein [synthetic construct] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF14318.5,PF00946.18" Mononegavirales mRNA-capping region V|Mononegavirales RNA dependent RNA polymerase TRINITY_DN10964_c0_g1_i1 18.86911381 35.80928589 1.928941734 0.053867082 -4.214452278 9.04E-06 7.38E-05 Down 8.174804 9.717922 3.541252 0 0 0.98713 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10967_c0_g1_i1 13.56468085 1.674386165 25.45497554 15.20257159 3.926243478 0.000234316 0.001432113 Up 0 0.5049233 0.4091252 4.897898 1.400494 4.772493 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10973_c0_g1_i2 15.00908211 30.01816421 0 0 #NAME? 4.49E-10 6.67E-09 Down 3.929383 3.182118 4.517256 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10974_c0_g1_i1 15.65030383 31.30060767 0 0 #NAME? 3.59E-08 4.22E-07 Down 6.755774 5.189942 2.496173 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN10975_c0_g1_i1 20.36213324 28.91231105 11.81195544 0.408544146 -1.291436114 0.0264841 0.08517129 Down 1.256896 1.91381 1.861011 0.7830128 0.5374372 0.3242971 XP_011084671.1 serine/threonine-protein kinase TIO [Sesamum indicum] Q2QAV0|TIO_ARATH Serine/threonine-protein kinase TIO OS=Arabidopsis thaliana OX=3702 GN=TIO PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T ENOG410XRQ6 Serine threonine kinase Biological Process: cytokinesis by cell plate formation (GO:0000911);|Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoskeleton (GO:0005856);|Biological Process: male meiosis cytokinesis (GO:0007112);|Cellular Component: phragmoplast (GO:0009524);|Biological Process: embryo sac cellularization (GO:0009558);|Molecular Function: kinesin binding (GO:0019894); -- -- TRINITY_DN10979_c0_g2_i1 6.559185204 0 13.11837041 Inf Inf 4.21E-05 0.000302521 Up 0.02907166 0 3.66E-53 2.072352 1.157408 2.947866 PIN21777.1 hypothetical protein CDL12_05525 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- O ENOG410YIE6 Heat shock protein -- -- -- TRINITY_DN10994_c0_g1_i1 4.317296691 7.899575013 0.735018369 0.093045305 -3.425922831 0.032968283 0.101804713 Down 0.7350617 1.694388 0.9502999 0.2235985 0 0 XP_011071492.1 serine/threonine-protein kinase RUNKEL [Sesamum indicum] F4JY37|RUK_ARATH Serine/threonine-protein kinase RUNKEL OS=Arabidopsis thaliana OX=3702 GN=RUK PE=1 SV=1 sind:105156925 K17545 ULK4 serine/threonine-protein kinase ULK4 -- -- KOG0597 Serine-threonine protein kinase FUSED [R] POORLY CHARACTERIZED General function prediction only T ENOG410XRQ6 Serine threonine kinase Biological Process: cytokinesis by cell plate formation (GO:0000911);|Biological Process: phragmoplast assembly (GO:0000914);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: spindle (GO:0005819);|Cellular Component: microtubule (GO:0005874);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: cellularization (GO:0007349);|Molecular Function: microtubule binding (GO:0008017);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: phragmoplast (GO:0009524);|Biological Process: pollen development (GO:0009555);|Biological Process: microsporogenesis (GO:0009556);|Cellular Component: preprophase band (GO:0009574);|Biological Process: radial microtubular system formation (GO:0010245);|Biological Process: endosperm cellularization (GO:0010342);|Molecular Function: transferase activity (GO:0016740); "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN11002_c0_g1_i1 16.77458268 26.24644721 7.302718147 0.278236444 -1.845616694 0.006232034 0.025540873 Down 3.305141 4.12778 3.276479 1.366421 1.018814 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11004_c0_g1_i1 31.00143393 54.16039679 7.842471058 0.144800842 -2.787858103 7.75E-08 8.68E-07 Down 10.89036 9.761307 7.310358 0 1.627912 1.619674 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1100_c0_g1_i2 4.459048231 8.918096463 0 0 #NAME? 0.002017013 0.00970514 Down 0.5116422 1.509546 1.796623 0 0 0 PQM39464.1 hypothetical protein Pyn_41061 [Prunus yedoensis var. nudiflora] Q6JN46|EIX2_SOLLC Receptor-like protein EIX2 OS=Solanum lycopersicum OX=4081 GN=EIX2 PE=1 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); -- -- TRINITY_DN11014_c0_g1_i1 18.18428203 31.04064386 5.327920205 0.171643353 -2.542514102 0.001456616 0.007282761 Down 7.84831 3.286207 4.478955 0.5721374 0 1.672253 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11016_c0_g1_i1 29.13770815 58.27541631 0 0 #NAME? 4.46E-13 8.88E-12 Down 6.721663 12.99232 7.698189 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11017_c0_g1_i1 41.20083829 63.35113837 19.05053821 0.300713432 -1.733538787 2.89E-05 0.000214236 Down 4.847039 6.041938 5.150216 1.497708 0.8067101 1.633547 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11019_c0_g1_i2 10.59789367 17.0934342 4.102353147 0.239995843 -2.058918679 0.013367437 0.048558585 Down 1.514321 2.946243 4.718804 0 0.9172319 0.883292 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1101_c0_g1_i1 6.079924921 11.06259624 1.097253604 0.099185904 -3.333721092 0.011178861 0.041737296 Down 1.46614 1.527397 0.8907718 0.2091974 0.1035814 0 XP_019168755.1 PREDICTED: ethylene-responsive transcription factor ERF003-like [Ipomoea nil] Q94AW5|ERF03_ARATH Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873); PF00847.19 AP2 domain TRINITY_DN11022_c0_g1_i1 5.03013829 10.06027658 0 0 #NAME? 0.001033395 0.005375809 Down 2.806217 1.976007 1.672764 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11027_c0_g1_i1 14.90422606 29.80845212 0 0 #NAME? 6.31E-10 9.17E-09 Down 2.627603 2.866857 2.42086 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11045_c0_g2_i1 9.641391229 4.134776621 15.14800584 3.663560871 1.873246587 0.047888665 0.136881189 Up 0 0.3970422 1.262295 1.979866 1.959884 1.177455 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11046_c0_g1_i2 8.389822129 15.62227922 1.15736504 0.074084263 -3.754689075 0.000787511 0.004224971 Down 3.13808 2.20337 2.099214 0 0 0.4479495 XP_021602663.1 uncharacterized protein LOC110607810 [Manihot esculenta] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN11046_c0_g2_i1 6.562001503 13.12400301 0 0 #NAME? 0.000107582 0.00070847 Down 2.744249 2.289891 2.39652 0 0 0 XP_011081378.1 uncharacterized protein LOC105164425 [Sesamum indicum] P92520|M820_ARATH Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Cellular Component: mitochondrion (GO:0005739); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN1104_c1_g1_i1 3.269979214 6.539958429 0 0 #NAME? 0.011167919 0.041707434 Down 0.3482005 0.6801208 1.311238 0 0 0 CDP18090.1 unnamed protein product [Coffea canephora] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111K5V Reverse transcriptase (RNA-dependent DNA polymerase) -- -- -- TRINITY_DN11050_c0_g1_i1 4.607771576 9.215543151 0 0 #NAME? 0.001923437 0.009301225 Down 1.140745 1.249093 0.7346877 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11051_c0_g1_i1 18.4105023 29.75748218 7.063522417 0.237369626 -2.074792756 0.001243385 0.006335278 Down 2.774456 1.862055 2.213333 0.8124753 0.1612942 0.3529596 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11053_c0_g1_i1 11.98413745 19.54270216 4.425572742 0.226456541 -2.142693881 0.008472067 0.033195489 Down 2.117741 2.077994 1.878616 0.5028162 0.3319148 0.1713513 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11055_c0_g1_i1 16.32539441 28.50132946 4.149459369 0.145588274 -2.78003393 0.013549907 0.049123148 Down 1.593849 6.827354 3.422269 0 0.4964257 0.9448568 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11058_c0_g1_i1 11.94147391 21.63887707 2.244070747 0.103705508 -3.26943557 0.000234611 0.001433724 Down 1.900842 3.503421 1.689146 0 0.2937053 0.3289838 XP_012857372.1 PREDICTED: protein NRT1/ PTR FAMILY 7.3 [Erythranthe guttata] Q9LQL2|PTR14_ARATH Protein NRT1/ PTR FAMILY 7.3 OS=Arabidopsis thaliana OX=3702 GN=NPF7.3 PE=1 SV=2 sind:105155943 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Biological Process: leaf senescence (GO:0010150);|Biological Process: response to nitrate (GO:0010167);|Molecular Function: nitrate transmembrane transporter activity (GO:0015112);|Molecular Function: symporter activity (GO:0015293);|Molecular Function: potassium:proton antiporter activity (GO:0015386);|Biological Process: nitrate transport (GO:0015706);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: potassium ion homeostasis (GO:0055075);|Biological Process: proton transmembrane transport (GO:1902600); -- -- TRINITY_DN11060_c0_g1_i1 13.82455904 5.740432251 21.90868582 3.816556814 1.932271668 0.021771017 0.072515936 Up 0.2767106 1.606539 1.066778 1.219622 4.634655 3.620787 PIN22198.1 hypothetical protein CDL12_05100 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZH4A NA -- -- -- TRINITY_DN11063_c0_g1_i1 11.95183321 20.9351252 2.968541218 0.141797156 -2.818099496 0.000990991 0.005180703 Down 2.910894 5.320706 2.831535 0 0.817441 0.4216391 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11073_c0_g1_i2 343.6885596 681.778719 5.598400311 0.008211462 -6.928145108 3.77E-175 2.14E-172 Down 129.289 148.0235 135.7492 9.57E-07 1.482929 1.278527 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11079_c0_g2_i1 79.72253276 1.872538056 157.5725275 84.14917227 6.394877176 1.03E-31 6.11E-30 Up 0 1.163533 0 19.71976 30.83946 28.3477 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11084_c0_g1_i1 24.69262506 45.38484069 4.000409437 0.088144177 -3.503990923 7.33E-06 6.09E-05 Down 6.316285 3.435154 3.148775 0.2231116 0.6632401 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11084_c1_g1_i1 64.05809566 116.4784055 11.63778577 0.099913677 -3.323174012 9.39E-18 2.66E-16 Down 7.002707 5.246525 4.748115 0.2481161 0.3605881 0.7233042 XP_016503535.1 PREDICTED: cytidine deaminase 1-like [Nicotiana tabacum] O65896|CDA1_ARATH Cytidine deaminase 1 OS=Arabidopsis thaliana OX=3702 GN=CDA1 PE=1 SV=1 sind:105173608 K01489 "cdd, CDA" cytidine deaminase ko00240 Pyrimidine metabolism KOG0833 Cytidine deaminase [F] METABOLISM Nucleotide transport and metabolism F COG0295 cytidine deaminase Molecular Function: cytidine deaminase activity (GO:0004126);|Cellular Component: cytosol (GO:0005829);|Biological Process: cytidine catabolic process (GO:0006216);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: cytidine deamination (GO:0009972);|Molecular Function: protein homodimerization activity (GO:0042803);|Molecular Function: deoxycytidine deaminase activity (GO:0047844); -- -- TRINITY_DN11093_c0_g1_i1 8.912316361 17.82463272 0 0 #NAME? 0.000250141 0.001520642 Down 1.191454 4.611523 2.142028 0 0 0 XP_012836341.1 PREDICTED: uncharacterized protein LOC105956976 [Erythranthe guttata] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN11093_c0_g2_i1 9.867545679 19.73509136 0 0 #NAME? 1.03E-06 9.90E-06 Down 4.413908 2.720405 2.156529 0 0 0 XP_023908235.1 uncharacterized protein LOC112019924 [Quercus suber] -- -- bna:106392594 K00620 argJ glutamate N-acetyltransferase / amino-acid N-acetyltransferase ko00220 Arginine biosynthesis KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN11099_c0_g1_i1 18.9547095 37.909419 0 0 #NAME? 0.001098156 0.00567106 Down 3.658128 3.811665 0 0 0 0 KRH74072.1 hypothetical protein GLYMA_02G309500 [Glycine max] Q32904|CB23_PEA "Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum OX=3888 GN=lhca3 PE=1 SV=1" gmx:100784090 K08909 LHCA3 light-harvesting complex I chlorophyll a/b binding protein 3 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- S ENOG410ZM8E Chlorophyll a-b binding protein "Cellular Component: photosystem I (GO:0009522);|Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis, light harvesting (GO:0009765);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: metal ion binding (GO:0046872);" PF00504.20 Chlorophyll A-B binding protein TRINITY_DN11100_c0_g1_i2 95.84765508 191.6953102 0 0 #NAME? 7.99E-60 1.13E-57 Down 4.052075 4.167703 4.758608 3.54E-33 1.72E-81 5.77E-107 XP_022899445.1 uncharacterized protein LOC111412764 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11100_c0_g2_i1 25.94999877 51.89999755 0 0 #NAME? 6.60E-17 1.76E-15 Down 6.34781 5.519989 6.623642 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11112_c0_g1_i2 13.58328794 23.4735642 3.693011689 0.157326414 -2.668167182 0.000629848 0.00346386 Down 5.783891 2.838839 5.672949 0 1.321635 0.4804761 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11120_c0_g1_i1 4.770577357 9.541154714 0 0 #NAME? 0.001534341 0.00762935 Down 1.152421 1.237258 0.7706329 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11120_c0_g2_i1 5.98289652 10.87908733 1.086705707 0.099889418 -3.323524333 0.010079736 0.038291863 Down 0.8233772 1.342796 2.005239 0 0.2873823 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11121_c0_g2_i1 7.688102675 15.37620535 0 0 #NAME? 0.030718167 0.096085496 Down 0.8470559 7.396635 1.325529 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11122_c0_g1_i3 73.75342854 145.192127 2.31473008 0.015942532 -5.970975444 1.78E-38 1.36E-36 Down 11.74149 11.0726 10.51966 0 0 0.4237228 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11123_c0_g1_i1 6.678260083 13.35652017 0 0 #NAME? 8.94E-05 0.000598712 Down 2.444149 2.420893 2.445135 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11128_c0_g1_i1 69.80338814 103.6782633 35.928513 0.34653853 -1.528912325 1.31E-06 1.23E-05 Down 4.12729 6.05739 5.230859 1.471187 1.604349 1.238103 PIN16796.1 Oxysterol-binding protein [Handroanthus impetiginosus] Q9SW00|ORP4B_ARATH Oxysterol-binding protein-related protein 4B OS=Arabidopsis thaliana OX=3702 GN=ORP4B PE=2 SV=2 sind:105161654 K20464 "OSBPL5_8, ORP5_8" oxysterol-binding protein-related protein 5 -- -- KOG2210 Oxysterol-binding protein [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XRW6 Oxysterol-binding protein Cellular Component: cytosol (GO:0005829);|Molecular Function: lipid binding (GO:0008289);|Molecular Function: sterol transporter activity (GO:0015248);|Cellular Component: membrane (GO:0016020);|Molecular Function: sterol binding (GO:0032934);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231); PF01237.17 Oxysterol-binding protein TRINITY_DN1112_c0_g1_i1 5.81036248 11.62072496 0 0 #NAME? 0.000343617 0.002024635 Down 2.187289 2.45722 1.422892 0 0 0 XP_011084630.1 shikimate O-hydroxycinnamoyltransferase-like [Sesamum indicum] Q8GSM7|HST_TOBAC Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum OX=4097 GN=HST PE=1 SV=1 sind:105166835 K13065 "E2.3.1.133, HCT" shikimate O-hydroxycinnamoyltransferase ko00940|ko00945|ko00941 "Phenylpropanoid biosynthesis|Stilbenoid, diarylheptanoid and gingerol biosynthesis|Flavonoid biosynthesis" -- -- -- -- -- S ENOG410XPQ7 hydroxycinnamoyl-Coenzyme A shikimate quinate hydroxycinnamoyltransferase-like Molecular Function: shikimate O-hydroxycinnamoyltransferase activity (GO:0047172); PF02458.14 Transferase family TRINITY_DN11131_c0_g1_i1 4.029360024 8.058720047 0 0 #NAME? 0.004462156 0.019228992 Down 1.257425 2.410614 0.9739542 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11135_c0_g1_i2 12.90500773 25.81001547 0 0 #NAME? 1.16E-08 1.45E-07 Down 5.4198 3.430077 3.830938 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11135_c0_g2_i1 6.496931715 12.99386343 0 0 #NAME? 0.000452555 0.002583681 Down 2.693965 3.511934 0.7023813 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11141_c0_g2_i1 7.337006142 14.67401228 0 0 #NAME? 0.002499204 0.011664239 Down 1.340413 4.833684 1.398167 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11141_c0_g3_i1 6.087106046 12.17421209 0 0 #NAME? 0.000209554 0.001297721 Down 2.372539 1.724752 2.070035 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11142_c0_g1_i1 100.6560406 188.1835221 13.12855899 0.069764658 -3.84135983 3.48E-26 1.62E-24 Down 15.78111 23.04268 18.70649 0.4228318 1.041659 1.704381 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11154_c0_g1_i1 49.34806577 97.55704565 1.139085878 0.011676101 -6.420297646 2.13E-27 1.06E-25 Down 2.346901 2.250488 2.38452 0.02297582 0 0.04688439 XP_011093261.1 uncharacterized protein LOC105173270 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF04434.16,PF10551.8" SWIM zinc finger|MULE transposase domain TRINITY_DN11156_c0_g1_i2 24.91760396 36.07884822 13.7563597 0.381285999 -1.391054538 0.009750275 0.037293222 Down 2.198365 2.522693 1.620774 0.4440464 0.7775124 0.6951728 XP_011090927.1 putative serine/threonine-protein kinase [Sesamum indicum] Q8L4H4|NORK_MEDTR Nodulation receptor kinase OS=Medicago truncatula OX=3880 GN=NORK PE=1 SV=2 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Biological Process: nodulation (GO:0009877);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein autophosphorylation (GO:0046777); "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN11157_c0_g1_i1 5.113371554 10.22674311 0 0 #NAME? 0.000883115 0.004673808 Down 1.892903 1.492336 1.606828 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11158_c0_g1_i1 6.33758524 12.67517048 0 0 #NAME? 0.000131185 0.000849117 Down 3.429651 1.108766 3.717479 0 0 0 XP_011100958.1 mitogen-activated protein kinase 7 [Sesamum indicum] Q39027|MPK7_ARATH Mitogen-activated protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=MPK7 PE=1 SV=2 sind:105179061 K20537 MPK7_14 mitogen-activated protein kinase 7/14 -- -- KOG0660 Mitogen-activated protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XNY0 Mitogen-activated protein kinase Molecular Function: MAP kinase activity (GO:0004707);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: defense response (GO:0006952);|Biological Process: regulation of gene expression (GO:0010468);|Biological Process: intracellular signal transduction (GO:0035556);|Biological Process: response to hydrogen peroxide (GO:0042542); -- -- TRINITY_DN11163_c0_g1_i1 30.284053 17.43720924 43.13089676 2.47349769 1.306552552 0.007318327 0.02932305 Up 0.549513 1.190376 1.345759 2.590623 1.546118 1.986761 PIN15575.1 hypothetical protein CDL12_11781 [Handroanthus impetiginosus] Q9M5J9|PGIP1_ARATH Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=PGIP1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YB0Y polygalacturonase inhibiting protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Molecular Function: polygalacturonase inhibitor activity (GO:0090353); "PF13855.5,PF12799.6,PF08263.11,PF00560.32,PF13516.5" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine rich repeat N-terminal domain|Leucine Rich Repeat|Leucine Rich repeat TRINITY_DN11166_c0_g1_i1 10.98768272 21.97536544 0 0 #NAME? 3.57E-05 0.000260503 Down 7.302433 2.875404 2.864572 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11167_c0_g1_i1 45.29792737 75.86492162 14.73093312 0.19417318 -2.364584148 1.32E-08 1.65E-07 Down 11.56467 10.1407 9.302336 2.255515 1.820858 0.8345829 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11169_c0_g1_i1 33.70895134 67.41790268 0 0 #NAME? 7.35E-22 2.70E-20 Down 7.619963 8.604539 11.04836 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1116_c0_g1_i1 17.19099177 33.99619519 0.385788347 0.011347986 -6.461419915 3.42E-10 5.13E-09 Down 1.724292 1.285725 1.301599 0 0 0.04759775 KYP76889.1 "hypothetical protein KK1_021151, partial [Cajanus cajan]" -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN11173_c0_g1_i3 17.4714394 26.92623809 8.016640721 0.297725984 -1.747942959 0.048829383 0.139018576 Down 2.119522 5.326455 2.270309 0.9060695 1.341563 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11178_c0_g1_i1 19.3974842 29.46663877 9.328329642 0.316572573 -1.659391827 0.007415468 0.029636409 Down 5.278068 6.567435 3.560172 1.111839 1.13321 1.696147 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11193_c0_g1_i2 13.73008194 21.44960548 6.010558402 0.280217667 -1.835380179 0.012140606 0.044751137 Down 3.145062 3.82734 3.443331 0.7850001 0.3897621 1.219697 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11194_c0_g1_i1 22.90500448 45.44777371 0.362235236 0.007970363 -6.971138927 1.56E-13 3.24E-12 Down 4.219942 3.605551 2.26367 0 0.07960682 0 XP_012857318.1 PREDICTED: metacaspase-9-like [Erythranthe guttata] Q9FYE1|MCA9_ARATH Metacaspase-9 OS=Arabidopsis thaliana OX=3702 GN=AMC9 PE=1 SV=1 -- -- -- -- -- -- KOG1546 Metacaspase involved in regulation of apoptosis [DO] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning |Posttranslational modification, protein turnover, chaperones " O ENOG410Y41C Metacaspase Molecular Function: cysteine-type peptidase activity (GO:0008234);|Cellular Component: apoplast (GO:0048046); PF00656.21 Caspase domain TRINITY_DN11194_c0_g2_i1 4.538558359 8.352646247 0.724470471 0.086735443 -3.527234545 0.024628044 0.08022539 Down 0.8977517 1.287587 1.184759 0 0.183862 0 PIN11039.1 Metacaspase involved in regulation of apoptosis [Handroanthus impetiginosus] Q9FYE1|MCA9_ARATH Metacaspase-9 OS=Arabidopsis thaliana OX=3702 GN=AMC9 PE=1 SV=1 -- -- -- -- -- -- KOG1546 Metacaspase involved in regulation of apoptosis [DO] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning |Posttranslational modification, protein turnover, chaperones " O ENOG410Y41C Metacaspase Molecular Function: cysteine-type peptidase activity (GO:0008234);|Cellular Component: apoplast (GO:0048046); PF00656.21 Caspase domain TRINITY_DN11197_c0_g1_i1 26.46338016 37.1549777 15.77178261 0.424486397 -1.236209773 0.01773141 0.061286979 Down 7.220607 6.610396 3.853726 1.714097 1.219801 3.147394 PNT41417.1 hypothetical protein POPTR_004G155400v3 [Populus trichocarpa] Q9SIJ5|RADL2_ARATH Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1 -- -- -- -- -- -- KOG0724 "Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " K ENOG410YUEI Myb-like DNA-binding domain Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: gravitropism (GO:0009630);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: response to red light (GO:0010114); -- -- TRINITY_DN1119_c0_g1_i1 75.73230523 47.75014024 103.7144702 2.172024411 1.119040317 0.000140703 0.00090479 Up 3.854902 4.024924 3.636969 7.025881 7.411833 5.724264 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11201_c0_g1_i1 15.64396085 9.071478808 22.21644289 2.449043134 1.292218184 0.049358507 0.140243535 Up 2.389425 0.7725861 1.523821 3.077317 3.788587 2.659852 PIN25501.1 hypothetical protein CDL12_01753 [Handroanthus impetiginosus] Q680Z7|PPR24_ARATH "Pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E25 PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN1120_c0_g1_i1 2.492075819 4.984151638 0 0 #NAME? 0.03631915 0.109936039 Down 0.3343936 0.9777534 1.300065 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11211_c0_g1_i2 9.73671945 2.013519615 17.45991929 8.671343035 3.116255458 0.001029266 0.005356738 Up 0.2106099 0.2040717 0.3198596 1.345936 2.351675 2.071353 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11217_c0_g1_i3 238.4029468 86.19591645 390.6099772 4.531652929 2.180037372 1.04E-21 3.80E-20 Up 16.07346 9.039758 15.30788 56.22746 42.72465 48.80233 OMO98386.1 hypothetical protein COLO4_13926 [Corchorus olitorius] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11218_c0_g1_i1 37.63947664 72.74330664 2.535646649 0.034857457 -4.842388887 1.17E-15 2.84E-14 Down 15.58128 13.99044 9.055205 0 1.10839 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11221_c0_g1_i2 59.68990902 82.42064413 36.95917391 0.448421318 -1.157073228 0.000473038 0.002689238 Down 6.00933 6.504477 7.302457 2.432833 1.791067 2.940149 PIN01354.1 hypothetical protein CDL12_26136 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111USD Late embryogenesis abundant protein -- -- -- TRINITY_DN11226_c0_g1_i2 15.5693094 26.57981797 4.558800827 0.171513621 -2.54360494 0.000421171 0.002426167 Down 4.56601 3.123142 2.908861 0 0.3565273 1.098443 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11232_c0_g1_i1 15.32224863 30.64449726 0 0 #NAME? 0.023806324 0.078024583 Down 14.44282 2.884525 0.6594253 0.000139893 1.06E-06 3.28E-76 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11234_c0_g1_i1 13.87911179 21.53693719 6.22128639 0.288865883 -1.791528271 0.016860223 0.058722943 Down 5.103549 2.989453 3.136128 1.85372 0.7182684 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11238_c0_g1_i1 10.54911422 21.09822843 0 0 #NAME? 0.004011415 0.01753396 Down 4.031875 2.999777 0 0 0 0 NP_001276268.2 photosynthetic electron transfer C-like protein [Glycine max] P26291|UCRIA_PEA "Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum OX=3888 GN=petC PE=2 SV=1" gmx:100799420 K02636 petC cytochrome b6-f complex iron-sulfur subunit ko00195 Photosynthesis KOG1671 "Ubiquinol cytochrome c reductase, subunit RIP1" [C] METABOLISM Energy production and conversion C COG0723 "Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (By similarity)" "Molecular Function: plastoquinol--plastocyanin reductase activity (GO:0009496);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity (GO:0045158);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);" PF08802.9 Cytochrome B6-F complex Fe-S subunit TRINITY_DN11239_c0_g1_i2 86.45582361 115.3413932 57.57025398 0.499129171 -1.002514872 0.000507982 0.002863737 Down 8.984606 12.14283 13.71058 6.110528 3.559972 4.264872 -- -- Q9M373|AGP20_ARATH Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: plasma membrane (GO:0005886);|Cellular Component: anchored component of membrane (GO:0031225); -- -- TRINITY_DN11240_c0_g1_i1 19.00728475 37.24299282 0.771576693 0.020717365 -5.593015636 2.28E-10 3.49E-09 Down 4.170413 4.785175 3.595947 0 0 0.2400975 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11254_c0_g2_i1 67.03848436 2.286602434 131.7903663 57.63588997 5.848895555 3.72E-37 2.70E-35 Up 0.5109613 1.05E-36 0.39025 14.66454 11.41702 14.8117 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11260_c0_g1_i1 20.11275249 28.27504751 11.95045747 0.422650306 -1.242463602 0.034627479 0.105898076 Down 1.375008 1.080658 1.150006 0.3888258 0.316825 0.5241332 XP_009590113.1 "PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like [Nicotiana tomentosiformis]" P52410|KASC1_ARATH "3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KAS1 PE=1 SV=2" jcu:105645646 K09458 fabF 3-oxoacyl-[acyl-carrier-protein] synthase II ko00061|ko00780 Fatty acid biosynthesis|Biotin metabolism KOG1394 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [IQ] METABOLISM|METABOLISM "Lipid transport and metabolism |Secondary metabolites biosynthesis, transport and catabolism " I COG0304 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (By similarity) Molecular Function: 3-oxoacyl-[acyl-carrier-protein] synthase activity (GO:0004315);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Cellular Component: chloroplast stroma (GO:0009570); "PF00109.25,PF02801.21" "Beta-ketoacyl synthase, N-terminal domain|Beta-ketoacyl synthase, C-terminal domain" TRINITY_DN11263_c0_g2_i1 21.81572152 43.63144304 0 0 #NAME? 2.01E-05 0.000154311 Down 6.271702 3.25932 13.23405 4.83E-33 3.42E-48 2.05E-48 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11266_c0_g1_i2 15.86345782 31.72691565 0 0 #NAME? 1.19E-10 1.89E-09 Down 4.006693 3.500059 5.587618 0 0 0 XP_011100958.1 mitogen-activated protein kinase 7 [Sesamum indicum] Q39027|MPK7_ARATH Mitogen-activated protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=MPK7 PE=1 SV=2 sind:105179061 K20537 MPK7_14 mitogen-activated protein kinase 7/14 -- -- KOG0660 Mitogen-activated protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XNY0 Mitogen-activated protein kinase Molecular Function: MAP kinase activity (GO:0004707);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: defense response (GO:0006952);|Biological Process: regulation of gene expression (GO:0010468);|Biological Process: intracellular signal transduction (GO:0035556);|Biological Process: response to hydrogen peroxide (GO:0042542); PF00069.24 Protein kinase domain TRINITY_DN11269_c0_g1_i3 326.6627831 460.5280725 192.7974937 0.418644389 -1.256202804 5.58E-17 1.49E-15 Down 8.180724 9.477094 10.14807 3.200299 3.364347 2.832722 XP_019163427.1 PREDICTED: uncharacterized protein LOC109159770 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z0Y2 transposon protein -- -- -- TRINITY_DN11270_c0_g1_i1 14.11260165 1.441869006 26.7833343 18.57542827 4.215323568 9.10E-07 8.80E-06 Up 0.09932819 0.1924653 0.150458 1.987192 1.688882 1.968436 XP_011081030.1 probable transcriptional regulator SLK3 isoform X2 [Sesamum indicum] Q94BP0|SLK2_ARATH Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana OX=3702 GN=SLK2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Biological Process: negative regulation of transcription by RNA polymerase II (GO:0000122);|Molecular Function: RNA polymerase II activating transcription factor binding (GO:0001102);|Cellular Component: nucleus (GO:0005634);|Cellular Component: transcription factor complex (GO:0005667);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: response to aluminum ion (GO:0010044);|Biological Process: cell differentiation (GO:0030154);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Biological Process: positive regulation of transcription by RNA polymerase II (GO:0045944);|Biological Process: regulation of response to osmotic stress (GO:0047484);|Biological Process: gynoecium development (GO:0048467);|Biological Process: plant ovule development (GO:0048481);|Biological Process: negative regulation of response to salt stress (GO:1901001);" PF01803.15 LIM-domain binding protein TRINITY_DN11270_c0_g2_i1 17.00526902 3.542282632 30.4682554 8.60130559 3.104555663 1.55E-05 0.000121131 Up 0.1140642 0.3316275 0.5174986 1.500677 2.517863 2.225983 XP_011081029.1 probable transcriptional regulator SLK3 isoform X1 [Sesamum indicum] Q8W234|SEUSS_ARATH Transcriptional corepressor SEUSS OS=Arabidopsis thaliana OX=3702 GN=SEU PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410XT7C NA "Biological Process: negative regulation of transcription by RNA polymerase II (GO:0000122);|Molecular Function: RNA polymerase II activating transcription factor binding (GO:0001102);|Biological Process: response to hypoxia (GO:0001666);|Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleoplasm (GO:0005654);|Cellular Component: transcription factor complex (GO:0005667);|Biological Process: cellular response to DNA damage stimulus (GO:0006974);|Biological Process: response to oxidative stress (GO:0006979);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to fungus (GO:0009620);|Biological Process: response to nematode (GO:0009624);|Biological Process: response to auxin (GO:0009733);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: regulation of flower development (GO:0009909);|Biological Process: response to silver ion (GO:0010272);|Biological Process: cell differentiation (GO:0030154);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Biological Process: positive regulation of transcription by RNA polymerase II (GO:0045944);|Biological Process: response to cycloheximide (GO:0046898);|Molecular Function: protein heterodimerization activity (GO:0046982);|Biological Process: gynoecium development (GO:0048467);|Biological Process: plant ovule development (GO:0048481);|Molecular Function: molecular adaptor activity (GO:0060090);|Biological Process: cellular response to external biotic stimulus (GO:0071217);" PF01803.15 LIM-domain binding protein TRINITY_DN11272_c0_g1_i1 5.498989816 10.27350916 0.724470471 0.070518307 -3.825858355 0.013206387 0.048066654 Down 2.982825 0.9450378 1.029271 0 0.2809316 0 GAU40717.1 hypothetical protein TSUD_263670 [Trifolium subterraneum] P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN11275_c0_g3_i1 7.119532213 2.445747469 11.79331696 4.821968379 2.26962219 0.027283883 0.087316505 Up 1.094456 0 0.2862605 1.062335 2.811588 1.13781 PIN02916.1 Ubiquitin--protein ligase [Handroanthus impetiginosus] Q6AVN2|SIRP1_ORYSJ E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1 sind:105170616 K11982 RNF115_126 E3 ubiquitin-protein ligase RNF115/126 -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Cellular Component: cytoplasm (GO:0005737);|Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: ubiquitin protein ligase activity (GO:0061630); -- -- TRINITY_DN1127_c0_g1_i1 92.57273587 29.55001229 155.5954595 5.265495592 2.396569325 6.18E-17 1.65E-15 Up 0.874069 1.290402 1.237623 4.966412 4.705051 4.657338 XP_012850744.1 PREDICTED: cytochrome P450 CYP72A219-like [Erythranthe guttata] H2DH21|C7A29_PANGI Cytochrome P450 CYP72A219 OS=Panax ginseng OX=4054 PE=2 SV=1 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN11285_c0_g1_i1 19.78363541 31.02316378 8.544107052 0.275410565 -1.860344193 0.002939116 0.013423413 Down 5.483882 4.529311 8.048791 3.117321 0 1.003204 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11289_c0_g1_i1 7.905970104 2.66474274 13.14719747 4.933758621 2.302687135 0.02154999 0.071911982 Up 0.4240094 0.2075317 0.244708 1.232021 0.4674713 1.768441 XP_021292688.1 probable S-adenosylmethionine-dependent methyltransferase At5g37990 [Herrania umbratica] Q9FKR0|MT878_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana OX=3702 GN=At5g38780 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111PH9 methyltransferase Molecular Function: methyltransferase activity (GO:0008168);|Molecular Function: metal ion binding (GO:0046872); PF03492.14 SAM dependent carboxyl methyltransferase TRINITY_DN11291_c0_g1_i1 12.28318682 20.11479047 4.451583169 0.221308951 -2.175866295 0.016580328 0.057939247 Down 2.50998 1.038052 1.051312 0.1191111 0.4158322 0.2768093 XP_011081326.1 protein NRT1/ PTR FAMILY 7.3 [Sesamum indicum] Q9LQL2|PTR14_ARATH Protein NRT1/ PTR FAMILY 7.3 OS=Arabidopsis thaliana OX=3702 GN=NPF7.3 PE=1 SV=2 sind:105164382 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Biological Process: leaf senescence (GO:0010150);|Biological Process: response to nitrate (GO:0010167);|Molecular Function: nitrate transmembrane transporter activity (GO:0015112);|Molecular Function: symporter activity (GO:0015293);|Molecular Function: potassium:proton antiporter activity (GO:0015386);|Biological Process: nitrate transport (GO:0015706);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: potassium ion homeostasis (GO:0055075);|Biological Process: proton transmembrane transport (GO:1902600); PF00854.20 POT family TRINITY_DN11291_c0_g2_i1 9.45440239 17.43876804 1.470036737 0.084297052 -3.56837401 0.000480906 0.002729745 Down 2.216793 2.188323 3.630289 0.6082608 0 0 XP_012857372.1 PREDICTED: protein NRT1/ PTR FAMILY 7.3 [Erythranthe guttata] Q9LQL2|PTR14_ARATH Protein NRT1/ PTR FAMILY 7.3 OS=Arabidopsis thaliana OX=3702 GN=NPF7.3 PE=1 SV=2 mdm:103436871 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Biological Process: leaf senescence (GO:0010150);|Biological Process: response to nitrate (GO:0010167);|Molecular Function: nitrate transmembrane transporter activity (GO:0015112);|Molecular Function: symporter activity (GO:0015293);|Molecular Function: potassium:proton antiporter activity (GO:0015386);|Biological Process: nitrate transport (GO:0015706);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: potassium ion homeostasis (GO:0055075);|Biological Process: proton transmembrane transport (GO:1902600); -- -- TRINITY_DN11292_c0_g1_i1 17.38269773 27.38710334 7.378292113 0.269407539 -1.892137872 0.03088544 0.096495477 Down 4.820634 1.468663 2.735934 0.2720977 1.165615 0.5506397 AJD25237.1 cytochrome P450 CYP706C35 [Salvia miltiorrhiza] F8S1I0|C7BL2_LACSA Costunolide synthase OS=Lactuca sativa OX=4236 GN=CYP71BL2 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN11297_c0_g1_i1 15.70481167 31.40962335 0 0 #NAME? 0.003779419 0.016667556 Down 6.633452 3.870385 1.18E-27 2.34E-26 2.16E-26 6.66E-55 KRH11350.1 hypothetical protein GLYMA_15G102000 [Glycine max] P15102|GLNA4_PHAVU "Glutamine synthetase leaf isozyme, chloroplastic OS=Phaseolus vulgaris OX=3885 PE=2 SV=1" gmx:100780873 K01915 "glnA, GLUL" glutamine synthetase ko00910|ko00630|ko00250|ko00220 "Nitrogen metabolism|Glyoxylate and dicarboxylate metabolism|Alanine, aspartate and glutamate metabolism|Arginine biosynthesis" KOG0683 Glutamine synthetase [E] METABOLISM Amino acid transport and metabolism E COG0174 glutamine synthetase Molecular Function: glutamate-ammonia ligase activity (GO:0004356);|Molecular Function: ATP binding (GO:0005524);|Biological Process: glutamine biosynthetic process (GO:0006542);|Cellular Component: chloroplast (GO:0009507); PF00120.23 "Glutamine synthetase, catalytic domain" TRINITY_DN11300_c0_g1_i1 29.332323 41.86872643 16.79591957 0.401156687 -1.31776225 0.006811178 0.027595483 Down 3.01614 3.025207 2.583438 1.098431 0.5680413 1.092104 XP_020548841.1 uncharacterized protein LOC105159669 isoform X2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YU0E WRC -- PF08879.9 WRC TRINITY_DN11306_c0_g1_i1 7.204680892 2.592491717 11.81687007 4.55811295 2.188436675 0.04904305 0.13951314 Up 5.15E-45 0.2305803 0.7182455 0.8529753 1.95345 0.9685392 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11316_c0_g1_i2 19.09825496 28.42755445 9.768955475 0.343643893 -1.541013775 0.009623843 0.036887198 Down 2.728292 4.827822 4.92221 0.495594 0.9994847 1.994792 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11319_c0_g1_i1 44.64813157 66.24531549 23.05094765 0.347963437 -1.522992376 0.000110443 0.000725521 Down 3.739601 3.627757 3.833023 1.117867 0.9472867 1.049642 PIN07578.1 Lysophospholipase [Handroanthus impetiginosus] Q9C942|CSE_ARATH Caffeoylshikimate esterase OS=Arabidopsis thaliana OX=3702 GN=CSE PE=1 SV=1 sind:105157552 K18368 CSE caffeoylshikimate esterase ko00940 Phenylpropanoid biosynthesis KOG1455 Lysophospholipase [I] METABOLISM Lipid transport and metabolism I COG2267 alpha beta hydrolase fold Molecular Function: 2-acylglycerol O-acyltransferase activity (GO:0003846);|Molecular Function: lysophospholipase activity (GO:0004622);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: lignin biosynthetic process (GO:0009809);|Biological Process: response to zinc ion (GO:0010043);|Cellular Component: membrane (GO:0016020);|Molecular Function: hydrolase activity (GO:0016787);|Biological Process: response to hydrogen peroxide (GO:0042542);|Biological Process: response to cadmium ion (GO:0046686);|Molecular Function: caffeoyl-CoA: alcohol caffeoyl transferase activity (GO:0090430); "PF12146.7,PF12697.6" "Serine aminopeptidase, S33|Alpha/beta hydrolase family" TRINITY_DN11325_c0_g2_i1 8.79662201 0.558128722 17.0351153 30.52183957 4.931770012 3.72E-05 0.000270556 Up 3.33E-84 0.09018908 0.07188356 1.407009 1.325964 1.074548 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11339_c0_g1_i1 27.00704552 44.78770511 9.226385932 0.20600265 -2.2792652 0.001537945 0.007642984 Down 13.55363 6.578811 6.576768 1.780294 1.756837 0.9093888 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11344_c0_g1_i1 26.42194927 41.2345805 11.60931803 0.281543255 -1.828571504 0.013802164 0.049874354 Down 8.313975 3.29233 4.357872 1.573053 0.3996782 1.588311 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11349_c0_g1_i2 56.89910634 75.93056937 37.86764331 0.49871407 -1.003715188 0.003446271 0.015394156 Down 5.218903 3.521013 4.628139 1.375325 2.121576 1.80972 XP_011077952.1 meiotic nuclear division protein 1 homolog [Sesamum indicum] Q8GYD2|MND1_ARATH Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana OX=3702 GN=MND1 PE=1 SV=1 -- -- -- -- -- -- KOG3433 Protein involved in meiotic recombination/predicted coiled-coil protein [DR] CELLULAR PROCESSES AND SIGNALING|POORLY CHARACTERIZED "Cell cycle control, cell division, chromosome partitioning |General function prediction only " D COG5124 meiotic nuclear divisions 1 homolog (S. cerevisiae) Molecular Function: double-stranded DNA binding (GO:0003690);|Cellular Component: nucleolus (GO:0005730);|Biological Process: double-strand break repair (GO:0006302);|Biological Process: reciprocal meiotic recombination (GO:0007131);|Biological Process: embryo sac development (GO:0009553);|Biological Process: pollen development (GO:0009555);|Biological Process: response to ionizing radiation (GO:0010212); PF03962.14 Mnd1 family TRINITY_DN11351_c0_g1_i1 4.343297902 0.492078091 8.194517713 16.65288063 4.057699852 0.01624467 0.05704737 Up 0 0 0.2179882 1.043702 1.049676 1.376876 ORD93171.1 ART2 [Enterospora canceri] Q8TGM7|ART2_YEAST Putative uncharacterized protein ART2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ART2 PE=5 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111JHC senescence-associated protein -- -- -- TRINITY_DN11352_c0_g1_i1 17.16197953 24.71460141 9.609357646 0.388812973 -1.362851739 0.035258358 0.107429363 Down 3.791551 2.194836 3.012205 0.4878177 1.452153 0.7439818 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11359_c0_g1_i1 10.46089275 16.49093881 4.43084669 0.268683714 -1.896019217 0.029342129 0.092559226 Down 1.757626 2.683369 1.576313 0.7204814 0.3511414 0.1736721 PNX74294.1 ribonuclease H [Trifolium pratense] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11376_c0_g1_i1 6.343566782 12.68713356 0 0 #NAME? 0.000130485 0.000844949 Down 1.614251 1.249592 2.31126 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11377_c0_g1_i1 24.54404148 39.50719307 9.580889903 0.242510013 -2.043883779 0.00025758 0.001561473 Down 6.156522 8.014462 5.20533 1.88701 1.272925 0.5658616 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1137_c0_g1_i1 6.369315909 11.24258465 1.496047164 0.133069682 -2.909746184 0.017048088 0.059254506 Down 1.751737 1.721706 1.223317 0 0.2294401 0.2372198 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11389_c0_g1_i1 13.35660961 24.8756733 1.837545922 0.073869193 -3.758883366 0.02926671 0.092353407 Down 3.581117 9.614204 1.407336 0.8891971 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11389_c0_g2_i2 16.06021629 27.74196606 4.378466519 0.15782827 -2.66357245 0.00020522 0.001272962 Down 1.708002 3.28431 2.913215 0.4778935 0.4749986 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11394_c0_g1_i1 7.737457263 13.20201672 2.272897807 0.172162924 -2.538153606 0.015756362 0.055600139 Down 1.166299 1.927944 1.173831 0.1219912 0.1227025 0.3896512 GAU30230.1 hypothetical protein TSUD_67820 [Trifolium subterraneum] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111K5V Reverse transcriptase (RNA-dependent DNA polymerase) -- PF13966.5 zinc-binding in reverse transcriptase TRINITY_DN11395_c0_g1_i1 32.927471 62.52416554 3.330776453 0.053271826 -4.230483463 1.26E-13 2.63E-12 Down 5.357429 5.664085 6.09346 0 0.5079265 0.2477292 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11401_c0_g1_i2 12.71361462 23.18315849 2.244070747 0.096797455 -3.368887069 0.000112768 0.000739402 Down 3.525911 2.116575 1.529376 0 0.2728269 0.2986214 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11406_c0_g1_i1 11.63812644 23.27625289 0 0 #NAME? 1.26E-06 1.19E-05 Down 5.166674 2.823675 1.993243 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1140_c0_g1_i1 4.990289642 9.256108812 0.724470471 0.078269442 -3.675407032 0.015974749 0.056229977 Down 2.514974 1.654636 1.298208 0 0.4390904 0 PON99959.1 "hypothetical protein TorRG33x02_043770, partial [Trema orientale]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN11410_c0_g1_i1 39.68880975 52.93824128 26.43937822 0.499438168 -1.001622017 0.013595215 0.049256782 Down 1.765302 1.300452 1.819015 0.6846215 0.554259 0.737909 XP_011090143.2 ABC transporter B family member 11-like [Sesamum indicum] Q9FWX7|AB11B_ARATH ABC transporter B family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCB11 PE=2 SV=1 sind:105170910 K05658 ABCB1 "ATP-binding cassette, subfamily B (MDR/TAP), member 1" ko02010 ABC transporters KOG0055 "Multidrug/pheromone exporter, ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1132 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: auxin efflux transmembrane transporter activity (GO:0010329);|Biological Process: basipetal auxin transport (GO:0010540);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);" "PF00005.26,PF02463.18" ABC transporter|RecF/RecN/SMC N terminal domain TRINITY_DN11414_c0_g1_i1 5.420757251 10.11704403 0.724470471 0.071608908 -3.803717131 0.023069665 0.076060526 Down 3.026904 0.1042673 3.037604 0 0.3994223 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11420_c0_g1_i1 21.31199232 37.36144983 5.26253482 0.140854674 -2.827720662 0.005839443 0.024205579 Down 3.693851 3.291909 9.232948 0.6015679 0.2965872 0.9932962 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11422_c0_g1_i1 35.23823096 64.26572343 6.210738492 0.09664154 -3.371212743 3.00E-11 5.07E-10 Down 5.355635 6.930852 7.657249 0.9042086 0.6050944 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11434_c0_g1_i1 13.64976043 21.36735306 5.932167804 0.27762764 -1.848776888 0.014207149 0.051041166 Down 3.347066 4.581706 2.573768 1.152592 0.5714755 0.5619772 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11439_c0_g1_i1 4.262656584 8.525313169 0 0 #NAME? 0.003074153 0.013958691 Down 1.333091 1.109274 1.013293 0 0 0 PSS36078.1 Endonuclease [Actinidia chinensis var. chinensis] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN1143_c0_g1_i1 6.733109621 13.46621924 0 0 #NAME? 9.28E-05 0.000619133 Down 1.416648 2.876207 1.057378 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11440_c0_g1_i1 633.7447015 357.0234391 910.4659638 2.550157396 1.350586293 2.95E-25 1.30E-23 Up 51.39542 56.50125 51.82868 97.81838 107.8423 123.1673 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11448_c0_g1_i1 8.206364861 1.926625604 14.48610412 7.518899413 2.910521501 0.003221504 0.014523165 Up 0.4679534 0.3051836 0 1.163138 1.876935 1.592832 XP_011080441.1 transcription factor BEE 1-like [Sesamum indicum] A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana OX=3702 GN=BHLH75 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YIJY Transcription factor "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: protein dimerization activity (GO:0046983);|Biological Process: positive regulation of brassinosteroid biosynthetic process (GO:2000488);" -- -- TRINITY_DN1144_c0_g1_i1 8.986153957 2.412503302 15.55980461 6.449651116 2.689221122 0.006484869 0.026443376 Up 0 0.2707277 0.4264519 1.060893 1.51799 1.137124 XP_012833888.1 PREDICTED: protein NRT1/ PTR FAMILY 7.3-like [Erythranthe guttata] Q9LQL2|PTR14_ARATH Protein NRT1/ PTR FAMILY 7.3 OS=Arabidopsis thaliana OX=3702 GN=NPF7.3 PE=1 SV=2 sind:105167169 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Biological Process: leaf senescence (GO:0010150);|Biological Process: response to nitrate (GO:0010167);|Molecular Function: nitrate transmembrane transporter activity (GO:0015112);|Molecular Function: symporter activity (GO:0015293);|Molecular Function: potassium:proton antiporter activity (GO:0015386);|Biological Process: nitrate transport (GO:0015706);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: potassium ion homeostasis (GO:0055075);|Biological Process: proton transmembrane transport (GO:1902600); PF00854.20 POT family TRINITY_DN11459_c0_g1_i1 7.346080106 12.83387781 1.8582824 0.144795083 -2.787915486 0.010185983 0.038650197 Down 0.8954667 1.751306 3.298709 0 0.3601619 0.3426231 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11460_c0_g1_i1 14.69001924 24.25109107 5.128947417 0.211493471 -2.241314971 0.002555912 0.011894662 Down 2.439396 3.513458 2.061728 0.2397078 0.9572686 0.2416057 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11461_c0_g1_i1 9.933762916 3.116255171 16.75127066 5.375448974 2.426385258 0.007212356 0.028970045 Up 0.1294095 0.4968846 0.3905799 1.272635 1.393382 1.585995 PIN14258.1 hypothetical protein CDL12_13117 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11461_c0_g2_i1 14.68726347 3.02936116 26.34516578 8.696607762 3.120452767 3.15E-05 0.000232746 Up 0.1599368 0.2572952 0.08064735 1.123188 1.116077 1.018526 PIN14258.1 hypothetical protein CDL12_13117 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11464_c0_g1_i1 25.65457353 37.94630698 13.36284009 0.352151267 -1.505732821 0.004005519 0.017509874 Down 4.740064 9.233319 6.726699 1.962983 2.000245 1.927096 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11467_c0_g1_i1 303.5607814 108.0371145 499.0844484 4.619564775 2.207756937 2.32E-42 2.00E-40 Up 6.109857 8.334756 7.139888 27.74928 26.57946 26.15609 XP_012840655.1 PREDICTED: metalloendoproteinase 1-like [Erythranthe guttata] Q5XF51|3MMP_ARATH Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1 -- -- -- -- -- -- KOG1565 Gelatinase A and related matrix metalloproteases [OW] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones |Extracellular structures " O ENOG410XQ5D matrix metallopeptidase Molecular Function: metalloendopeptidase activity (GO:0004222);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: extracellular matrix (GO:0031012);|Cellular Component: anchored component of membrane (GO:0031225); "PF00413.23,PF01471.17" Matrixin|Putative peptidoglycan binding domain TRINITY_DN11467_c0_g2_i1 7.464272476 14.56630972 0.362235236 0.024868017 -5.329564728 0.005502121 0.022995836 Down 4.939179 1.339336 1.584057 0.07748694 0.213729 0.003832225 XP_012840654.1 PREDICTED: metalloendoproteinase 1-like [Erythranthe guttata] Q9ZUJ5|5MMP_ARATH Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1 -- -- -- -- -- -- KOG1565 Gelatinase A and related matrix metalloproteases [OW] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones |Extracellular structures " O ENOG410XQ5D matrix metallopeptidase Molecular Function: metalloendopeptidase activity (GO:0004222);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: extracellular matrix (GO:0031012);|Cellular Component: anchored component of membrane (GO:0031225); PF01471.17 Putative peptidoglycan binding domain TRINITY_DN11479_c0_g2_i1 11.23536619 17.84127222 4.629460161 0.259480384 -1.946302618 0.016442068 0.057575777 Down 3.577532 3.662764 3.234024 0 0 2.181027 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11480_c0_g1_i1 8.436532605 15.32991182 1.543153387 0.1006629 -3.312396023 0.00205934 0.009881026 Down 3.709872 1.668628 1.526622 0 0 0.5522038 XP_026396497.1 "uncharacterized protein LOC113291119, partial [Papaver somniferum]" P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN11481_c0_g1_i2 39.50216134 76.73669882 2.267623858 0.029550709 -5.080663444 5.97E-19 1.82E-17 Down 8.024397 6.329113 6.182348 0 0.136569 0.315047 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11483_c0_g1_i2 28.44439418 56.16431789 0.724470471 0.012899123 -6.276583156 4.99E-07 5.01E-06 Down 7.102303 8.363201 2.58327 5.48E-42 0.1604935 1.05E-47 XP_011071161.1 protein SIEVE ELEMENT OCCLUSION B [Sesamum indicum] Q9SS87|SEOB_ARATH Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana OX=3702 GN=SEOB PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111ADI Mediator complex subunit 28 Biological Process: phloem development (GO:0010088);|Molecular Function: protein homodimerization activity (GO:0042803);|Molecular Function: protein self-association (GO:0043621); -- -- TRINITY_DN11487_c0_g1_i1 12.74371192 19.20356871 6.283855141 0.327223301 -1.611652612 0.035226108 0.107359924 Down 2.356168 2.588703 2.297148 0.7048917 0.7067912 0.5043191 CAN72498.1 hypothetical protein VITISV_010513 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only Q COG2124 Cytochrome p450 Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN11488_c0_g1_i2 30.06790416 58.59265493 1.543153387 0.026336977 -5.246766447 1.32E-08 1.64E-07 Down 5.767513 2.624338 3.553786 4.09E-46 8.20E-46 0.247617 PHT35322.1 "RuBisCO large subunit-binding protein subunit alpha, chloroplastic [Capsicum baccatum]" P21239|RUB1_BRANA "RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Brassica napus OX=3708 PE=2 SV=2" -- -- -- -- -- -- KOG0356 "Mitochondrial chaperonin, Cpn60/Hsp60p" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0459 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity) Molecular Function: ATP binding (GO:0005524);|Cellular Component: chloroplast (GO:0009507);|Biological Process: protein refolding (GO:0042026); -- -- TRINITY_DN11495_c0_g2_i1 15.60968824 24.18504044 7.03433604 0.290854839 -1.781628789 0.010654698 0.040082718 Down 2.334487 3.204896 1.907266 0.197023 0.9604152 0.5896346 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11498_c0_g1_i1 64.23619871 21.30286123 107.1695362 5.030757842 2.330775746 4.55E-12 8.29E-11 Up 2.685011 2.319574 1.81747 8.75025 8.814425 10.10701 KZV14017.1 hypothetical protein F511_44612 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- KOG0504 FOG: Ankyrin repeat [R] POORLY CHARACTERIZED General function prediction only S COG0666 Ankyrin Repeat -- PF13962.5 Domain of unknown function TRINITY_DN11502_c0_g1_i1 81.8795092 31.33017416 132.4288442 4.226878649 2.079592694 1.09E-11 1.93E-10 Up 3.513572 5.192332 9.984175 19.79377 23.96942 20.29303 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11512_c0_g1_i1 56.41590278 35.44578857 77.38601698 2.183221762 1.126458681 0.00074221 0.004005688 Up 1.570735 2.093437 1.090683 2.419774 2.908049 3.116487 XP_024963299.1 cysteine-rich receptor-like protein kinase 15 [Cynara cardunculus var. scolymus] Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF01657.16,PF07714.16,PF00069.24" Salt stress response/antifungal|Protein tyrosine kinase|Protein kinase domain TRINITY_DN11514_c0_g1_i1 10.65663276 21.31326551 0 0 #NAME? 3.14E-07 3.24E-06 Down 2.462564 4.899045 2.376929 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11525_c0_g1_i1 15.92384016 24.33334349 7.514336831 0.308808234 -1.695216874 0.01148584 0.04272179 Down 3.286507 4.184305 3.647627 0.217385 0.8713837 1.651926 PIN13482.1 hypothetical protein CDL12_13899 [Handroanthus impetiginosus] Q9SU13|FLA2_ARATH Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- M ENOG4111EHG fasciclin-like arabinogalactan protein Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: membrane (GO:0016020);|Cellular Component: anchored component of membrane (GO:0031225);|Cellular Component: anchored component of plasma membrane (GO:0046658); -- -- TRINITY_DN11526_c0_g1_i2 13.75442635 20.77909778 6.729754924 0.323871373 -1.626507142 0.026166134 0.084310004 Down 4.433532 3.348028 3.395936 0.5620822 0.9513465 1.305736 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11528_c0_g1_i3 115.315093 70.11292916 160.5172569 2.289410224 1.194975993 0.00014129 0.000907924 Up 15.55194 14.18023 9.829149 25.8692 17.48815 29.68158 XP_011086491.1 UDP-glycosyltransferase 74B1 [Sesamum indicum] O22822|U74F2_ARATH UDP-glycosyltransferase 74F2 OS=Arabidopsis thaliana OX=3702 GN=UGT74F2 PE=1 SV=1 sind:105168211 K11820 UGT74B1 N-hydroxythioamide S-beta-glucosyltransferase ko00966|ko00380 Glucosinolate biosynthesis|Tryptophan metabolism KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Cellular Component: cytosol (GO:0005829);|Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Biological Process: salicylic acid metabolic process (GO:0009696);|Biological Process: positive regulation of seed germination (GO:0010030);|Biological Process: benzoate metabolic process (GO:0018874);|Molecular Function: UDP-glucosyltransferase activity (GO:0035251);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);|Molecular Function: salicylic acid glucosyltransferase (ester-forming) activity (GO:0052639);|Molecular Function: salicylic acid glucosyltransferase (glucoside-forming) activity (GO:0052640);|Molecular Function: benzoic acid glucosyltransferase activity (GO:0052641);|Molecular Function: UDP-glucose:4-aminobenzoate acylglucosyltransferase activity (GO:0080002);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);|Molecular Function: nicotinate-O-glucosyltransferase activity (GO:0090704); -- -- TRINITY_DN11531_c0_g1_i1 6.255612127 11.78675378 0.724470471 0.061464801 -4.024095739 0.037457146 0.11256486 Down 0 3.275175 2.34783 0 0.32523 0 XP_011071434.1 condensin-2 complex subunit H2 isoform X1 [Sesamum indicum] -- -- sind:105156882 K11490 NCAPH2 condensin-2 complex subunit H2 -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11536_c0_g1_i1 6.368639562 12.37504389 0.362235236 0.02927143 -5.094362944 0.00074882 0.004034565 Down 1.987155 1.430462 2.801236 0 0.1623028 0 XP_022884402.1 germin-like protein subfamily 1 member 13 [Olea europaea var. sylvestris] P92997|GL113_ARATH Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana OX=3702 GN=GLP6 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YERY nutrient reservoir activity Molecular Function: manganese ion binding (GO:0030145);|Molecular Function: nutrient reservoir activity (GO:0045735);|Cellular Component: apoplast (GO:0048046); "PF00190.21,PF07883.10" Cupin|Cupin domain TRINITY_DN11536_c0_g2_i1 8.129009387 16.25801877 0 0 #NAME? 5.12E-05 0.000362352 Down 3.663729 1.034679 4.374744 0 0 0 PIN06152.1 hypothetical protein CDL12_21302 [Handroanthus impetiginosus] Q9FID0|GL114_ARATH Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana OX=3702 GN=At5g39110 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YERY nutrient reservoir activity Cellular Component: cell wall (GO:0005618);|Molecular Function: manganese ion binding (GO:0030145);|Molecular Function: nutrient reservoir activity (GO:0045735);|Cellular Component: apoplast (GO:0048046); PF00190.21 Cupin TRINITY_DN11542_c0_g1_i1 6.929299828 13.85859966 0 0 #NAME? 0.000348557 0.002050018 Down 1.73808 1.678967 4.801707 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11542_c0_g2_i1 4.426022916 8.852045832 0 0 #NAME? 0.002077945 0.009951904 Down 0.6235486 1.403216 2.047097 2.26E-75 0 7.74E-75 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11543_c0_g1_i3 132.5124683 260.8649293 4.160007267 0.015946978 -5.970573143 3.81E-67 6.03E-65 Down 10.45872 10.39772 11.74232 0.06308892 0.06286034 0.2696673 GAU12981.1 hypothetical protein TSUD_191730 [Trifolium subterraneum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF14111.5 Domain of unknown function (DUF4283) TRINITY_DN11548_c0_g1_i1 12.97105837 25.94211673 0 0 #NAME? 1.09E-08 1.37E-07 Down 5.031016 3.429383 3.377219 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11548_c0_g2_i3 15.18040908 30.36081815 0 0 #NAME? 4.56E-10 6.76E-09 Down 2.626622 1.927071 1.784038 0 0 0 XP_009794119.1 PREDICTED: uncharacterized protein LOC104240911 isoform X2 [Nicotiana sylvestris] -- -- aip:107612138 K07466 "RFA1, RPA1, rpa" replication factor A1 ko03430|ko03030|ko03440|ko03420 Mismatch repair|DNA replication|Homologous recombination|Nucleotide excision repair KOG0851 "Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " -- -- -- -- PF08646.9 Replication factor-A C terminal domain TRINITY_DN11560_c0_g1_i1 10.98465623 2.850931549 19.11838091 6.706011907 2.745455045 0.001073284 0.005560959 Up 0.8001284 1.75E-40 0.06549734 1.307235 1.038704 2.265821 XP_024032903.1 uncharacterized protein LOC112095347 [Morus notabilis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11561_c0_g1_i1 5.423692994 10.11236762 0.735018369 0.072685092 -3.782196702 0.04729764 0.135524667 Down 0 2.730908 1.904665 0.3373677 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11561_c1_g1_i1 12.75257959 20.39167429 5.113484888 0.250763366 -1.995601494 0.023621422 0.077519318 Down 4.172175 1.220421 4.269296 1.149835 0.7642937 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11572_c0_g1_i1 8.132345109 12.91809192 3.3465983 0.259062896 -1.948625694 0.043758949 0.127490777 Down 0.8006963 2.322892 2.501426 0.4358988 0.4330571 0.4226487 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11576_c0_g1_i2 87.88805571 128.2565596 47.51955186 0.370503872 -1.432439477 3.43E-07 3.52E-06 Down 20.99586 20.95074 21.53133 7.159257 5.960926 5.939921 PIN27107.1 hypothetical protein CDL12_00132 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11587_c0_g1_i1 21.40641885 32.59641582 10.21642188 0.313421633 -1.673823334 0.005112527 0.021584165 Down 4.613918 5.940752 3.493272 1.738224 1.701232 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1158_c0_g1_i1 10.4912166 19.82506815 1.15736504 0.058378868 -4.098409949 7.13E-05 0.000487858 Down 3.18991 4.310208 1.877569 0 0 0.4299864 XP_015574659.1 uncharacterized protein LOC107261244 [Ricinus communis] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN11590_c0_g1_i1 16.25062842 26.92359301 5.577663833 0.2071664 -2.271138063 0.00126474 0.006430074 Down 3.417958 2.709078 1.771073 0.4109858 0.4065894 0.4325923 -- -- Q9SN46|LRX5_ARATH Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=LRX5 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: structural constituent of cell wall (GO:0005199);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: cell wall organization (GO:0071555); -- -- TRINITY_DN11599_c0_g1_i1 79.26849752 121.3377774 37.19921763 0.30657573 -1.705684606 2.05E-08 2.49E-07 Down 17.28507 13.61228 13.27712 2.931662 5.665941 2.288232 XP_011084993.1 uncharacterized protein LOC105167116 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YQ10 protease inhibitor seed storage -- "PF14368.5,PF00234.21" Probable lipid transfer|Protease inhibitor/seed storage/LTP family TRINITY_DN11602_c0_g1_i1 33.87507617 67.75015234 0 0 #NAME? 7.47E-22 2.74E-20 Down 7.08859 5.469385 7.085292 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11609_c0_g2_i1 6.174245856 10.88372892 1.464762789 0.134582807 -2.893433978 0.018753308 0.064280671 Down 0.8000107 2.139299 1.679247 0.3232425 0.1608689 0 XP_022847002.1 kinesin-like protein KIN-5D [Olea europaea var. sylvestris] Q9LZU5|KN5D_ARATH Kinesin-like protein KIN-5D OS=Arabidopsis thaliana OX=3702 GN=KIN5D PE=3 SV=1 sind:105170675 K10398 "KIF11, EG5" kinesin family member 11 -- -- KOG0243 Kinesin-like protein [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5059 Kinesin family member "Molecular Function: microtubule motor activity (GO:0003777);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: spindle (GO:0005819);|Cellular Component: kinesin complex (GO:0005871);|Cellular Component: microtubule (GO:0005874);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: microtubule-based movement (GO:0007018);|Molecular Function: microtubule binding (GO:0008017);|Molecular Function: ATP-dependent microtubule motor activity, plus-end-directed (GO:0008574);|Molecular Function: ATPase activity (GO:0016887);" "PF00225.22,PF16796.4" Kinesin motor domain|Microtubule binding TRINITY_DN11619_c0_g1_i1 60.95450644 82.07970619 39.82930669 0.485251575 -1.0431952 0.011918898 0.044076133 Down 20.28691 15.10583 15.19747 10.77366 2.715928 6.173405 XP_011090124.1 CCR4-NOT transcription complex subunit 1 isoform X1 [Sesamum indicum] -- -- sind:105170897 K12604 "CNOT1, NOT1" CCR4-NOT transcription complex subunit 1 ko03018 RNA degradation KOG1831 Negative regulator of transcription [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5103 "Ccr4-NOT transcription complex, subunit" -- -- -- TRINITY_DN11621_c0_g1_i1 8.632132552 1.428347119 15.83591798 11.08688341 3.470781968 0.000854819 0.004543654 Up 0.02307305 0.3943412 0.1578827 2.085706 1.972429 0.8600771 AAY42548.1 "beta-tubulin, partial [Micromonas pusilla]" P29500|TBB1_PEA Tubulin beta-1 chain OS=Pisum sativum OX=3888 GN=TUBB1 PE=3 SV=1 fve:101313099 K07375 TUBB tubulin beta ko04145 Phagosome KOG1375 Beta tubulin [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5023 protein polymerization Molecular Function: GTPase activity (GO:0003924);|Molecular Function: structural constituent of cytoskeleton (GO:0005200);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based process (GO:0007017); -- -- TRINITY_DN11621_c0_g2_i1 6.88675306 1.507919636 12.26558648 8.134111518 3.02398477 0.007108997 0.028623266 Up 0.2094114 0.4041321 0.1644186 1.376341 1.529349 1.602715 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11626_c0_g1_i1 39.71201388 21.74973207 57.67429569 2.651724421 1.406930852 0.000668273 0.003651292 Up 0.7260268 0.6005691 0.6840774 1.452596 1.320177 1.551842 XP_019418409.1 PREDICTED: uncharacterized protein LOC109329191 [Lupinus angustifolius] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410YADE Reverse transcriptase (RNA-dependent DNA polymerase) Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); "PF00078.26,PF13966.5" Reverse transcriptase (RNA-dependent DNA polymerase)|zinc-binding in reverse transcriptase TRINITY_DN11632_c0_g1_i1 17.17009702 25.583261 8.756933038 0.34229151 -1.546702586 0.018810315 0.064451738 Down 4.912447 4.842754 4.739112 1.937925 1.970108 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11633_c0_g1_i1 27.14306618 3.395538383 50.89059397 14.98748894 3.905686784 2.15E-09 2.94E-08 Up 1.498516 0.3640579 0.2843122 6.577726 7.009789 12.12466 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11640_c0_g1_i1 35.06590543 11.77943229 58.35237857 4.953751347 2.308521454 1.38E-05 0.000108775 Up 0.5430775 3.802683 2.156074 11.41548 6.242497 8.050044 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11643_c0_g1_i1 15.30170682 23.00541227 7.598001378 0.330270168 -1.598281432 0.017287241 0.059938874 Down 2.536391 2.914032 3.08247 0 0.5113643 1.805679 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11645_c0_g1_i1 8.208581904 16.41716381 0 0 #NAME? 3.98E-05 0.000287522 Down 4.480918 1.297771 4.625976 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11660_c0_g1_i1 51.6054607 75.13297005 28.07795136 0.373710121 -1.420008457 0.00014861 0.000951458 Down 8.914769 11.47685 6.933421 2.974244 3.275306 1.970069 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11666_c0_g1_i1 18.51207384 27.65398577 9.370161915 0.338835855 -1.561341548 0.03755928 0.112797117 Down 9.013015 2.531817 6.076394 1.208264 1.240131 2.38137 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11667_c0_g1_i2 18.758099 37.516198 0 0 #NAME? 0.001356862 0.006837483 Down 6.173961 7.776821 0 0 0 0 KRH52242.1 hypothetical protein GLYMA_06G055500 [Glycine max] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YXEC Photosystem II reaction centre X protein (PsbX) -- PF06596.10 Photosystem II reaction centre X protein (PsbX) TRINITY_DN11672_c0_g1_i1 6.085205543 12.17041109 0 0 #NAME? 0.013117645 0.047808051 Down 2.287177 1.463375 0 0 0 0 KRH53627.1 hypothetical protein GLYMA_06G136500 [Glycine max] P19954|PRSP1_SPIOL "Ribosome-binding factor PSRP1, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP1 PE=1 SV=2" -- -- -- -- -- -- -- -- -- -- -- J COG1544 sigma 54 modulation protein ribosomal protein S30ea Biological Process: regulation of translation (GO:0006417);|Cellular Component: chloroplast stroma (GO:0009570);|Molecular Function: rRNA binding (GO:0019843);|Biological Process: primary metabolic process (GO:0044238); "PF16321.4,PF02482.18" Sigma 54 modulation/S30EA ribosomal protein C terminus|Sigma 54 modulation protein / S30EA ribosomal protein TRINITY_DN11682_c0_g1_i1 25.66031198 35.70070791 15.61991605 0.437523987 -1.192565982 0.023543948 0.077293008 Down 3.916082 4.37515 3.062912 0.9408728 1.54415 1.485919 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1168_c0_g1_i1 9.471872672 2.166464256 16.77728109 7.744083957 2.953094594 0.002450385 0.01146586 Up 0 0.2965613 0.35524 0.9508932 1.612277 1.846314 AOQ09873.1 Eno-RB [synthetic construct] P42894|ENO_NEOFR Enolase OS=Neocallimastix frontalis OX=4757 PE=3 SV=1 adl:AURDEDRAFT_51988 K01689 "ENO, eno" enolase ko03018|ko00010 RNA degradation|Glycolysis / Gluconeogenesis KOG2670 Enolase [G] METABOLISM Carbohydrate transport and metabolism G COG0148 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (By similarity) Cellular Component: phosphopyruvate hydratase complex (GO:0000015);|Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: phosphopyruvate hydratase activity (GO:0004634);|Biological Process: glycolytic process (GO:0006096); "PF00113.21,PF13378.5,PF07476.10" "Enolase, C-terminal TIM barrel domain|Enolase C-terminal domain-like|Methylaspartate ammonia-lyase C-terminus" TRINITY_DN11697_c0_g1_i1 10.06083713 20.12167426 0 0 #NAME? 6.24E-07 6.18E-06 Down 3.078938 3.250569 3.611794 0 0 0 XP_011084213.1 UDP-glucuronate 4-epimerase 6 [Sesamum indicum] -- -- sind:105166528 K08679 E5.1.3.6 UDP-glucuronate 4-epimerase ko00520|ko00500 Amino sugar and nucleotide sugar metabolism|Starch and sucrose metabolism -- -- -- -- -- M COG1087 udp-glucose 4-epimerase -- -- -- TRINITY_DN1169_c0_g2_i1 3.405180672 6.810361343 0 0 #NAME? 0.010762947 0.04042718 Down 1.347966 1.735303 1.049979 0 0 0 XP_012843176.1 PREDICTED: uncharacterized protein LOC105963330 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11702_c0_g1_i1 27.12179122 37.10089016 17.14269227 0.462056091 -1.113860098 0.031711614 0.098621904 Down 7.596986 8.129807 4.38661 3.747892 1.105777 2.50704 XP_011085847.1 cysteine-rich repeat secretory protein 60 [Sesamum indicum] Q0WPN8|CRR60_ARATH Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana OX=3702 GN=CRRSP60 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG410YCA0 cysteine-rich repeat secretory protein Cellular Component: plasmodesma (GO:0009506);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: viral process (GO:0016032); PF01657.16 Salt stress response/antifungal TRINITY_DN1170_c0_g1_i2 66.44935763 93.77140388 39.12731138 0.417262724 -1.260972053 7.18E-05 0.000491117 Down 7.993382 7.157292 8.385088 2.456034 2.432144 3.06125 XP_011081934.1 cytochrome P450 71D95-like [Sesamum indicum] P93531|C71D7_SOLCH Cytochrome P450 71D7 OS=Solanum chacoense OX=4108 GN=CYP71D7 PE=3 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" -- -- TRINITY_DN11710_c0_g1_i1 6.96042464 13.92084928 0 0 #NAME? 6.43E-05 0.00044376 Down 3.549949 2.791307 2.245405 0 0 0 XP_022635785.1 uncharacterized protein LOC111241502 [Vigna radiata var. radiata] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN11710_c1_g1_i1 19.34997126 38.69994251 0 0 #NAME? 1.08E-12 2.09E-11 Down 3.688649 3.181258 2.923439 0 0 0 KHN17953.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 bna:106454220 K01265 map methionyl aminopeptidase -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN11712_c0_g2_i3 8.658754382 17.31750876 0 0 #NAME? 4.90E-06 4.19E-05 Down 1.392216 1.341214 1.506732 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11718_c0_g1_i1 18.43566671 36.87133342 0 0 #NAME? 3.62E-11 6.08E-10 Down 4.391272 5.373612 8.747097 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11720_c0_g1_i1 22.51766578 43.19005438 1.845277186 0.042724586 -4.548789682 2.19E-10 3.35E-09 Down 1.998456 1.51573 2.238892 0.0882915 0.05871261 0.03533244 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11726_c0_g2_i1 8.879974532 14.74430162 3.01564744 0.20452969 -2.289617812 0.016043853 0.056434011 Down 1.356689 2.370439 1.90763 0 0.3265503 0.6522771 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11732_c0_g1_i1 122.9528924 51.28550425 194.6202805 3.794839953 1.924039041 2.18E-09 2.99E-08 Up 9.610052 13.74771 7.44895 23.20515 34.88838 35.927 PIN08290.1 hypothetical protein CDL12_19143 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11735_c0_g1_i1 439.5341869 596.2593694 282.8090045 0.474305343 -1.076111976 6.00E-16 1.49E-14 Down 36.78193 35.94124 34.42521 12.20191 16.23561 12.58623 EYU18692.1 hypothetical protein MIMGU_mgv1a011638mg [Erythranthe guttata] F4JIK2|ATCA4_ARATH Alpha carbonic anhydrase 4 OS=Arabidopsis thaliana OX=3702 GN=ACA4 PE=3 SV=1 sind:105159852 K01674 cah carbonic anhydrase ko00910 Nitrogen metabolism KOG0382 Carbonic anhydrase [R] POORLY CHARACTERIZED General function prediction only P COG3338 Carbonic anhydrase Molecular Function: carbonate dehydratase activity (GO:0004089);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: chloroplast stroma (GO:0009570); PF00194.20 Eukaryotic-type carbonic anhydrase TRINITY_DN11747_c0_g1_i2 21.22935623 41.37200675 1.086705707 0.026266691 -5.250621739 6.60E-11 1.07E-09 Down 4.786878 4.27511 4.27837 0 0.2597242 0 EYU39677.1 hypothetical protein MIMGU_mgv1a018884mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG2304 "von Willebrand factor, type A" -- -- -- TRINITY_DN11758_c0_g2_i2 19.25104361 31.90310306 6.598984155 0.206844586 -2.273380896 0.000395473 0.002292977 Down 3.524764 2.636899 2.686932 0.5172137 0.7673913 0.1620664 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1175_c0_g1_i1 15.0121823 30.02436461 0 0 #NAME? 4.86E-10 7.18E-09 Down 1.948527 1.335693 1.829514 0 0 0 XP_011084087.2 aluminum-activated malate transporter 12 [Sesamum indicum] O49696|ALMTC_ARATH Aluminum-activated malate transporter 12 OS=Arabidopsis thaliana OX=3702 GN=ALMT12 PE=2 SV=1 -- -- -- -- -- -- KOG4711 Predicted membrane protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410XR8V aluminum-activated malate transporter Cellular Component: plasma membrane (GO:0005886);|Biological Process: sulfate transport (GO:0008272);|Molecular Function: anion transmembrane transporter activity (GO:0008509);|Cellular Component: plant-type vacuole membrane (GO:0009705);|Biological Process: stomatal movement (GO:0010118);|Cellular Component: endomembrane system (GO:0012505);|Biological Process: malate transport (GO:0015743);|Cellular Component: integral component of membrane (GO:0016021); PF11744.7 Aluminium activated malate transporter TRINITY_DN11761_c0_g1_i2 20.46728814 40.93457627 0 0 #NAME? 0.001420378 0.007122761 Down 4.61082 3.357934 0 0 0 0 CAD57680.1 putative phosphatase [Glycine max] Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC24B11.05 PE=3 SV=1 gmx:547678 K07025 K07025 putative hydrolase of the HAD superfamily -- -- KOG3109 Haloacid dehalogenase-like hydrolase [R] POORLY CHARACTERIZED General function prediction only S COG1011 Hydrolase Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: pyrimidine nucleobase metabolic process (GO:0006206);|Molecular Function: nucleotidase activity (GO:0008252);|Molecular Function: 5'-nucleotidase activity (GO:0008253);|Biological Process: nucleotide catabolic process (GO:0009166); "PF13419.5,PF00702.25" Haloacid dehalogenase-like hydrolase|haloacid dehalogenase-like hydrolase TRINITY_DN11765_c0_g1_i1 29.66726912 59.33453824 0 0 #NAME? 3.35E-19 1.04E-17 Down 7.798809 7.3499 7.885884 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11768_c1_g2_i1 12.88798667 20.15647723 5.619496106 0.278793563 -1.842730843 0.015727364 0.055530191 Down 3.56681 1.362344 2.425259 0.3999449 0.3973459 0.7913 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11772_c0_g1_i1 43.0587372 17.58787686 68.52959755 3.89641104 1.962145878 5.78E-05 0.000403373 Up 0.6171781 4.134991 0.7031863 4.336937 5.894224 6.609056 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11777_c0_g1_i1 29.93447909 11.30243489 48.5665233 4.296996512 2.103328606 1.82E-05 0.00014068 Up 0.6005986 1.001454 0.774714 2.344683 3.454751 2.664995 -- -- Q8L940|PDX13_ARATH Pyridoxal 5'-phosphate synthase subunit PDX1.3 OS=Arabidopsis thaliana OX=3702 GN=PDX13 PE=1 SV=2 ath:AT5G01410 K06215 "pdxS, pdx1" pyridoxal 5'-phosphate synthase pdxS subunit ko00750 Vitamin B6 metabolism KOG1606 "Stationary phase-induced protein, SOR/SNZ family" [H] METABOLISM Coenzyme transport and metabolism H COG0214 "Involved in the production of pyridoxal phosphate, probably by incorporating ammonia into the pyridine ring (By similarity)" Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: cellular amino acid metabolic process (GO:0006520);|Biological Process: response to oxidative stress (GO:0006979);|Biological Process: response to lipid hydroperoxide (GO:0006982);|Biological Process: pyridoxine biosynthetic process (GO:0008615);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to UV-B (GO:0010224);|Biological Process: response to non-ionic osmotic stress (GO:0010335);|Cellular Component: endomembrane system (GO:0012505);|Biological Process: chlorophyll metabolic process (GO:0015994);|Molecular Function: amine-lyase activity (GO:0016843);|Molecular Function: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity (GO:0036381);|Biological Process: hyperosmotic salinity response (GO:0042538);|Molecular Function: protein homodimerization activity (GO:0042803);|Biological Process: pyridoxal phosphate biosynthetic process (GO:0042823);|Molecular Function: protein heterodimerization activity (GO:0046982); -- -- TRINITY_DN11778_c0_g1_i1 3.477992246 6.955984491 0 0 #NAME? 0.010116137 0.03841086 Down 1.528973 1.967336 0.7898686 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11780_c0_g1_i2 19.27561829 38.55123658 0 0 #NAME? 1.06E-12 2.05E-11 Down 6.656578 3.63379 5.546038 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11780_c0_g2_i1 16.59413205 32.08573655 1.102527553 0.034361921 -4.863045486 2.57E-08 3.08E-07 Down 3.171019 6.753108 4.754136 0.3902512 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11787_c0_g1_i1 8.000209763 16.00041953 0 0 #NAME? 1.44E-05 0.000113429 Down 2.914628 2.418813 1.889665 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11788_c0_g1_i1 32.11315421 17.52298215 46.70332626 2.665261305 1.414276983 0.002223119 0.010536024 Up 2.963189 3.747935 3.890512 8.151083 8.23558 6.808802 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11797_c0_g1_i2 23.28632463 32.91050201 13.66214725 0.415130321 -1.268363786 0.046197642 0.133027757 Down 6.322876 3.900188 2.562074 1.069247 2.134814 1.075749 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11820_c0_g1_i1 22.87546376 12.31095494 33.43997257 2.716277716 1.44163099 0.006728032 0.027314689 Up 0.7264589 0.971836 0.4378623 1.728675 1.394759 1.553866 XP_011081405.1 DNA mismatch repair protein MSH4 [Sesamum indicum] F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana OX=3702 GN=MSH4 PE=2 SV=1 sind:105164452 K08740 MSH4 DNA mismatch repair protein MSH4 -- -- KOG0220 Mismatch repair ATPase MSH4 (MutS family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG0249 that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity) Cellular Component: nuclear chromosome (GO:0000228);|Biological Process: resolution of meiotic recombination intermediates (GO:0000712);|Cellular Component: condensed nuclear chromosome (GO:0000794);|Cellular Component: synaptonemal complex (GO:0000795);|Molecular Function: damaged DNA binding (GO:0003684);|Molecular Function: ATP binding (GO:0005524);|Biological Process: mismatch repair (GO:0006298);|Biological Process: synapsis (GO:0007129);|Biological Process: reciprocal meiotic recombination (GO:0007131);|Molecular Function: DNA-dependent ATPase activity (GO:0008094);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: meiotic mismatch repair involved in reciprocal meiotic recombination (GO:0010777);|Molecular Function: mismatched DNA binding (GO:0030983);|Cellular Component: mismatch repair complex (GO:0032300);|Cellular Component: germ cell nucleus (GO:0043073);|Biological Process: homologous chromosome segregation (GO:0045143);|Biological Process: chiasma assembly (GO:0051026); PF00488.20 MutS domain V TRINITY_DN11824_c0_g1_i1 13.38954548 26.77909096 0 0 #NAME? 5.44E-09 7.09E-08 Down 2.357514 2.35574 2.248068 0 0 0 AIC62734.1 "TRBV3-1, partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- U ENOG410YSIY T cell receptor beta constant 2 -- PF07654.14 Immunoglobulin C1-set domain TRINITY_DN11825_c0_g1_i1 12.35711021 6.618409845 18.09581058 2.734162888 1.451099194 0.046964978 0.134784173 Up 1.033082 0.4311736 0.4535576 1.819453 1.558859 0.959188 CDP05572.1 unnamed protein product [Coffea canephora] Q8L612|MACP1_ARATH MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana OX=3702 GN=At1g14780 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y947 Membrane attack complex component perforin complement C9 Cellular Component: plasma membrane (GO:0005886);|Biological Process: immune response (GO:0006955);|Biological Process: plant-type hypersensitive response (GO:0009626); PF01823.18 MAC/Perforin domain TRINITY_DN11826_c0_g1_i1 12.80135138 25.60270276 0 0 #NAME? 0.003623082 0.016073355 Down 3.836178 2.616813 0 0 0 0 KRH20937.1 hypothetical protein GLYMA_13G210800 [Glycine max] P15102|GLNA4_PHAVU "Glutamine synthetase leaf isozyme, chloroplastic OS=Phaseolus vulgaris OX=3885 PE=2 SV=1" gmx:548036 K01915 "glnA, GLUL" glutamine synthetase ko00910|ko00630|ko00250|ko00220 "Nitrogen metabolism|Glyoxylate and dicarboxylate metabolism|Alanine, aspartate and glutamate metabolism|Arginine biosynthesis" KOG0683 Glutamine synthetase [E] METABOLISM Amino acid transport and metabolism E COG0174 glutamine synthetase Molecular Function: glutamate-ammonia ligase activity (GO:0004356);|Molecular Function: ATP binding (GO:0005524);|Biological Process: glutamine biosynthetic process (GO:0006542);|Cellular Component: chloroplast (GO:0009507); PF03951.18 "Glutamine synthetase, beta-Grasp domain" TRINITY_DN11849_c0_g1_i1 11.35819199 17.92084474 4.795539242 0.267595602 -1.901873688 0.02216449 0.07362698 Down 2.96406 2.874625 2.30305 0.4443162 0.9046409 0.456585 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11854_c0_g1_i2 29.0307351 52.90615304 5.155317161 0.097442677 -3.359302427 0.000102411 0.000677757 Down 6.74343 2.688233 8.149324 0.7124033 0.4762427 0.2455329 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11856_c0_g1_i1 27.32503308 50.7921827 3.857883467 0.075954276 -3.718725002 2.46E-10 3.76E-09 Down 3.099346 3.186565 4.425162 4.13E-44 0 0.700079 XP_022895990.1 hippocampus abundant transcript-like protein 1 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG2816 Predicted transporter ADD1 (major facilitator superfamily) [R] POORLY CHARACTERIZED General function prediction only U ENOG41101QS Major Facilitator Superfamily -- PF07690.15 Major Facilitator Superfamily TRINITY_DN1185_c0_g1_i1 8.155185616 15.15300619 1.15736504 0.076378576 -3.710688161 0.004554697 0.019578727 Down 2.341011 2.901693 0.5996117 0 0 0.4151335 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11864_c0_g2_i2 125.9492714 251.8985428 0 0 #NAME? 9.26E-78 1.80E-75 Down 8.823556 8.003264 9.754328 1.39E-71 3.47E-63 5.64E-67 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11871_c0_g1_i1 21.32792591 42.65585182 0 0 #NAME? 4.75E-14 1.01E-12 Down 5.880152 6.709528 7.68039 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11877_c0_g1_i1 12.67825327 25.35650653 0 0 #NAME? 1.41E-08 1.75E-07 Down 2.047858 3.103421 2.718456 3.53E-50 3.29E-63 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11880_c0_g1_i1 28.59367162 54.23180723 2.955536004 0.054498202 -4.197647547 7.45E-12 1.34E-10 Down 7.236292 5.895698 6.73017 0.191952 0.3803444 0.2197109 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11896_c0_g1_i1 8.244414669 2.997675797 13.49115354 4.500537902 2.170097442 0.032505984 0.100739564 Up 0.4224891 0.4096786 0.9980149 2.469029 1.063388 2.990435 AKN09643.1 basic helix-loop-helix transcription factor [Salvia miltiorrhiza] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41116U8 NA -- -- -- TRINITY_DN11897_c0_g1_i1 702.1657104 0 1404.331421 Inf Inf 0 0 Up 0 0 0 64.6864 65.2224 65.66985 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1189_c0_g1_i1 4.490494169 0.492078091 8.488910248 17.25114448 4.108620172 0.013003565 0.047468502 Up 0 0 0.251522 1.760795 1.019318 0.5514925 XP_011088158.1 nucleobase-ascorbate transporter 4 isoform X1 [Sesamum indicum] P93039|NAT4_ARATH Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana OX=3702 GN=NAT4 PE=2 SV=2 sind:105169466 K14611 "SLC23A1_2, SVCT1_2" "solute carrier family 23 (nucleobase transporter), member 1/2" -- -- KOG1292 Xanthine/uracil transporters [F] METABOLISM Nucleotide transport and metabolism F COG2233 permease Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); PF00860.19 Permease family TRINITY_DN11900_c0_g1_i1 163.3724243 293.0786856 33.66616309 0.114870732 -3.121916838 1.96E-40 1.59E-38 Down 22.03401 22.99964 20.77091 2.294021 2.216717 1.553188 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00257.18 Dehydrin TRINITY_DN11901_c0_g1_i1 52.22814876 104.4562975 0 0 #NAME? 4.21E-33 2.64E-31 Down 7.415504 5.587036 6.338688 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11914_c0_g1_i1 6.360531992 11.25102725 1.470036737 0.130658002 -2.936132614 0.021248653 0.071131784 Down 0.6094035 2.350704 3.254433 0.6340875 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11919_c0_g1_i1 3.388721862 6.391655376 0.385788347 0.060358127 -4.050308153 0.039656977 0.11779539 Down 0.571008 1.482283 0.8842064 0 0 0.2072365 XP_012844847.1 "PREDICTED: uncharacterized protein LOC105964883, partial [Erythranthe guttata]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11929_c0_g1_i1 52.49506693 82.10808193 22.88205193 0.278682091 -1.843307803 0.00069246 0.003768476 Down 8.151515 18.48403 15.35354 2.322143 2.315171 4.886473 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11931_c0_g1_i1 9.606751182 3.981831979 15.23167039 3.825292093 1.935569914 0.038769968 0.115690584 Up 0.2656506 0.2556746 1.248233 1.882455 1.86417 1.803166 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11939_c0_g1_i4 7.624888411 14.52530635 0.724470471 0.049876433 -4.325497894 0.000613164 0.003378655 Down 1.131101 1.471765 1.212495 1.84E-42 0.182187 2.76E-44 XP_005703596.1 ubiquitin [Galdieria sulphuraria] P69309|UBIQP_AVEFA Polyubiquitin OS=Avena fatua OX=4499 PE=2 SV=2 -- -- -- -- -- -- KOG0001 Ubiquitin and ubiquitin-like proteins [OR] CELLULAR PROCESSES AND SIGNALING|POORLY CHARACTERIZED "Posttranslational modification, protein turnover, chaperones |General function prediction only " O COG5272 ubiquitin Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737); "PF00240.22,PF11976.7,PF14560.5,PF13881.5,PF10302.8,PF04452.13" Ubiquitin family|Ubiquitin-2 like Rad60 SUMO-like|Ubiquitin-like domain|Ubiquitin-2 like Rad60 SUMO-like|DUF2407 ubiquitin-like domain|RNA methyltransferase TRINITY_DN11941_c0_g1_i2 22.57169304 34.36857281 10.77481327 0.313507731 -1.673427076 0.003487966 0.015552973 Down 2.658073 1.42962 1.539836 0.5076615 0.424204 0.4676086 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11941_c1_g1_i3 101.9777088 203.9554175 0 0 #NAME? 4.18E-63 6.21E-61 Down 6.125637 6.352828 5.462601 8.70E-88 0 0 PNY16757.1 "envelope-like protein, partial [Trifolium pratense]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11945_c0_g1_i1 18.06536563 35.0282037 1.102527553 0.031475424 -4.989630391 4.20E-09 5.57E-08 Down 5.049331 9.926735 6.160841 0.5658718 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11945_c1_g1_i1 18.86149152 36.99851257 0.724470471 0.01958107 -5.674396574 2.78E-10 4.21E-09 Down 6.328913 5.64457 4.932108 5.16E-89 0.2787168 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11947_c0_g1_i1 24.83470835 35.28243965 14.38697704 0.407765936 -1.294186833 0.018410855 0.063298035 Down 5.736562 4.554364 3.047074 1.967335 1.559358 0.806719 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11952_c0_g1_i1 69.71806173 129.0263621 10.4097614 0.080679337 -3.631656954 8.70E-23 3.35E-21 Down 5.098211 5.177596 5.140344 0.2180187 0.402997 0.3903607 XP_021681924.1 uncharacterized protein LOC110665926 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41122DF NA -- "PF07468.10,PF03318.12,PF01117.19" Agglutinin domain|Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2|Aerolysin toxin TRINITY_DN11963_c0_g1_i1 18.06980088 34.59644838 1.543153387 0.044604387 -4.486670565 1.39E-07 1.50E-06 Down 5.446609 2.545998 3.648167 0 0 0.3916133 XP_011097161.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 [Sesamum indicum] Q2PCF1|PDR2_NICPL Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia OX=4092 GN=PDR2 PE=2 SV=1 -- -- -- -- -- -- KOG0065 "Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " T COG0515 Serine Threonine protein kinase Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887); -- -- TRINITY_DN11965_c0_g1_i1 17.37202832 28.93247103 5.811585615 0.20086724 -2.315685802 0.000729377 0.00394742 Down 3.138528 2.017863 1.982633 0.2447302 0.8900141 1.16E-58 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1197_c0_g1_i1 13.33303441 23.31173926 3.354329564 0.143890146 -2.7969603 0.00047221 0.002685419 Down 5.677159 3.750819 4.569912 0 0.9173403 0.8507348 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11982_c0_g1_i1 65.93780357 36.31784629 95.55776084 2.631151641 1.395694397 2.26E-05 0.00017092 Up 1.518854 2.146073 2.881546 4.427516 4.642451 4.95293 XP_011075652.1 uncharacterized protein LOC105160086 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKVG NA -- -- -- TRINITY_DN11989_c0_g1_i1 16.20799485 32.41598971 0 0 #NAME? 2.60E-08 3.12E-07 Down 2.88515 6.785769 3.917226 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF05911.10 "Filament-like plant protein, long coiled-coil" TRINITY_DN11992_c0_g1_i1 615.0602982 1014.721719 215.398877 0.212273841 -2.236001499 1.59E-75 2.99E-73 Down 49.36864 50.28861 52.86341 9.096949 8.491434 8.513997 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN11999_c0_g1_i1 6.630768915 0.738117137 12.52342069 16.96671174 4.084635083 0.00191094 0.009247686 Up 0 0 0.3434699 2.053732 1.419505 0.6715073 PIN03189.1 "Transcription factor, Myb superfamily [Handroanthus impetiginosus]" -- -- sind:105170655 K09422 MYBP "transcription factor MYB, plant" -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1199_c0_g1_i2 2.614534791 5.229069583 0 0 #NAME? 0.035604323 0.108258226 Down 1.485392 0.7102669 0.3778117 0 0 0 XP_011079422.1 uncharacterized protein LOC105162932 isoform X2 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG0714 Molecular chaperone (DnaJ superfamily) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0484 "ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)" -- -- -- TRINITY_DN12010_c0_g1_i3 38.47225024 75.85252083 1.091979655 0.014396089 -6.118179244 6.02E-21 2.11E-19 Down 3.49452 3.442177 3.34025 0.04611982 0.09217314 0 KZV51713.1 hypothetical protein F511_13125 [Dorcoceras hygrometricum] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YMEY NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF14223.5,PF03732.16" gag-polypeptide of LTR copia-type|Retrotransposon gag protein TRINITY_DN12012_c1_g1_i1 36.42562126 12.05251511 60.7987274 5.044484645 2.334706888 2.49E-07 2.61E-06 Up 0.2691298 0.9888717 0.6545998 2.955306 2.559104 2.27919 YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta] P93313|NU4M_ARATH NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis thaliana OX=3702 GN=ND4 PE=2 SV=2 -- -- -- -- -- -- KOG4845 "NADH dehydrogenase, subunit 4" [C] METABOLISM Energy production and conversion S ENOG41118VB NA Cellular Component: mitochondrial inner membrane (GO:0005743);|Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: ATP synthesis coupled electron transport (GO:0042773);|Cellular Component: respiratory chain (GO:0070469); -- -- TRINITY_DN12014_c0_g1_i2 32.49730485 55.12987516 9.86473454 0.178936276 -2.482482201 0.000347422 0.002044174 Down 9.764198 14.11888 6.066578 2.495872 1.704705 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12016_c0_g1_i1 19.59748931 38.47050814 0.724470471 0.01883184 -5.730682188 1.12E-10 1.78E-09 Down 2.639135 3.204446 1.996964 0 0.119043 0 OMO52105.1 reverse transcriptase [Corchorus capsularis] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only E COG0520 cysteine desulfurase Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN12027_c0_g1_i1 1349.731355 0 2699.462709 Inf Inf 0 0 Up 0 0 0 106.6588 103.6565 97.48767 XP_016461127.1 PREDICTED: uncharacterized protein LOC107784497 [Nicotiana tabacum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12028_c0_g1_i1 11.76542156 0.571650609 22.95919252 40.16298099 5.327794448 5.21E-07 5.21E-06 Up 0.07954348 0 0.05963035 1.327181 1.791438 1.248856 XP_011089036.1 uncharacterized protein LOC105170116 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKZJ Protein of unknown function (DUF506) -- PF04720.11 PDDEXK-like family of unknown function TRINITY_DN12038_c0_g1_i1 278.5992985 117.0285831 440.1700138 3.761218006 1.91119993 1.18E-30 6.79E-29 Up 4.555561 6.691518 6.001563 17.56924 17.43129 17.37857 XP_011083680.1 uncharacterized protein LOC105166139 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- Q COG3315 Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity (By similarity) -- PF04072.13 Leucine carboxyl methyltransferase TRINITY_DN12043_c0_g1_i2 21.68860307 43.37720613 0 0 #NAME? 0.00087223 0.004622665 Down 5.139922 4.842952 0 0 0 0 KHN40470.1 "Photosystem I reaction center subunit XI, chloroplastic [Glycine soja]" Q39654|PSAL_CUCSA "Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=3659 GN=PSAL PE=2 SV=1" gmx:100500317 K02699 psaL photosystem I subunit XI ko00195 Photosynthesis -- -- -- -- -- C ENOG4111KFU photosystem I reaction center Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: photosystem I reaction center (GO:0009538);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: integral component of membrane (GO:0016021); PF02605.14 Photosystem I reaction centre subunit XI TRINITY_DN12059_c0_g1_i1 47.35443121 25.32173838 69.38712405 2.740219609 1.454291519 0.000177333 0.001114915 Up 3.696429 2.551252 5.276942 10.17637 7.7438 7.613464 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12061_c0_g1_i1 1650.591864 480.7517384 2820.431989 5.866711992 2.552552169 1.31E-192 9.29E-190 Up 88.02367 119.5845 78.57422 455.121 460.9122 437.5479 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12064_c1_g1_i1 18.23884429 3.063726427 33.41396214 10.90631391 3.44709168 1.03E-06 9.86E-06 Up 0.08366622 0.1201102 0.1882432 1.512124 1.020128 1.1248 PIN22658.1 Cytochrome P450 CYP2 subfamily [Handroanthus impetiginosus] O65782|C83B1_ARATH Cytochrome P450 83B1 OS=Arabidopsis thaliana OX=3702 GN=CYP83B1 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Biological Process: tryptophan biosynthetic process (GO:0000162);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: shade avoidance (GO:0009641);|Biological Process: induced systemic resistance (GO:0009682);|Biological Process: indoleacetic acid biosynthetic process (GO:0009684);|Biological Process: indole glucosinolate biosynthetic process (GO:0009759);|Biological Process: response to red light (GO:0010114);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);|Biological Process: regulation of growth (GO:0040008);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: adventitious root development (GO:0048830);|Biological Process: defense response by callose deposition in cell wall (GO:0052544);" PF00067.21 Cytochrome P450 TRINITY_DN12068_c0_g1_i1 27.07863131 49.01249335 5.144769264 0.104968528 -3.25197126 0.000610039 0.003365109 Down 9.514069 3.06612 5.821348 0.5589796 0.7544282 0.2086884 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12069_c0_g1_i1 12.18271467 22.05069925 2.31473008 0.104973092 -3.25190853 0.009571581 0.036737356 Down 6.082195 4.295058 1.203963 0 0 0.9579887 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12072_c0_g1_i5 18.90358708 28.52840805 9.278766103 0.325246543 -1.620394371 0.008305054 0.032625818 Down 2.644999 2.245427 2.744998 0.8623452 0.5743815 0.5890643 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00562.27 "RNA polymerase Rpb2, domain 6" TRINITY_DN12078_c0_g1_i1 32.65421046 5.542280359 59.76614055 10.78367327 3.430776785 5.56E-11 9.10E-10 Up 0.2228245 0.6394458 0.7549766 3.4471 5.426064 4.56734 KRH54197.1 hypothetical protein GLYMA_06G171100 [Glycine max] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YVEP NA -- "PF00036.31,PF13405.5,PF13833.5,PF13499.5,PF13202.5" EF hand|EF-hand domain|EF-hand domain pair|EF-hand domain pair|EF hand TRINITY_DN12080_c0_g1_i2 13.10135258 22.93204015 3.270665017 0.14262425 -2.809708799 0.00056569 0.003151881 Down 4.327162 4.148755 4.201721 0.3484115 1.062002 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12082_c0_g2_i1 26.27151275 9.261871502 43.281154 4.673046262 2.22436332 2.49E-05 0.000186968 Up 0.5019724 1.494442 0.9486772 4.736215 3.681531 2.756294 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12092_c0_g1_i1 4.014378992 0.246039046 7.782718939 31.63204816 4.983315067 0.009672045 0.037050053 Up 2.79E-77 3.43E-66 0.1877968 1.6515 0.6928464 0.751822 XP_022855926.1 uncharacterized protein LOC111377105 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN12098_c0_g1_i1 58.70290883 116.634241 0.771576693 0.006615353 -7.23996611 4.75E-34 3.10E-32 Down 9.673965 14.52776 11.97005 0 0 0.1647925 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12106_c0_g1_i1 20.09674984 40.19349968 0 0 #NAME? 2.48E-13 5.05E-12 Down 2.767284 2.500472 3.901194 0 0 0 PIN19218.1 Tyrosine kinase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN12107_c0_g1_i1 707.3680534 112.5496633 1302.186443 11.56988306 3.532302378 1.13E-65 1.76E-63 Up 11.5293 9.71988 13.79741 94.01939 112.4117 120.8559 PIN08758.1 hypothetical protein CDL12_18655 [Handroanthus impetiginosus] Q93WF6|SAG21_ARATH "Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAG21 PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZEWF late embryogenesis abundant protein "Biological Process: response to reactive oxygen species (GO:0000302);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: defense response (GO:0006952);|Biological Process: response to oxidative stress (GO:0006979);|Biological Process: response to cold (GO:0009409);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to light stimulus (GO:0009416);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to fungus (GO:0009620);|Biological Process: response to insect (GO:0009625);|Biological Process: response to absence of light (GO:0009646);|Biological Process: response to ethylene (GO:0009723);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: leaf senescence (GO:0010150);|Biological Process: response to hydrogen peroxide (GO:0042542);|Biological Process: cellular response to water deprivation (GO:0042631);|Biological Process: root development (GO:0048364);|Biological Process: regulation of leaf senescence (GO:1900055);|Biological Process: regulation of defense response to fungus (GO:1900150);|Biological Process: regulation of defense response to bacterium (GO:1900424);|Biological Process: response to salt (GO:1902074);|Biological Process: regulation of photoperiodism, flowering (GO:2000028);" PF03242.12 Late embryogenesis abundant protein TRINITY_DN12110_c0_g1_i2 38.57121743 53.9440466 23.19838825 0.430045384 -1.217439174 0.005960887 0.024629058 Down 2.925843 4.351468 2.595983 0.9897463 1.733106 0.6641938 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12119_c0_g1_i1 32.47085722 2.453068962 62.48864547 25.47366031 4.67093437 9.49E-07 9.14E-06 Up 0.4842694 2.41E-05 0.6442779 3.951424 7.816131 11.20399 PIM99940.1 hypothetical protein CDL12_27558 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZA7G VQ motif-containing protein -- PF05678.13 VQ motif TRINITY_DN12124_c0_g1_i1 11.41987513 20.65051701 2.18923326 0.106013484 -3.237680317 0.000458665 0.002614812 Down 6.439053 4.496241 2.349929 0.6115707 0.6480569 0 CAN74695.1 hypothetical protein VITISV_024648 [Vitis vinifera] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12124_c0_g2_i1 8.666075876 17.33215175 0 0 #NAME? 4.14E-06 3.58E-05 Down 2.050423 2.814903 4.262984 0 0 0 XP_020968081.1 uncharacterized protein LOC110267241 [Arachis ipaensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12128_c0_g1_i2 14.86343975 27.14130999 2.585569504 0.095263254 -3.391936363 0.000253735 0.001540427 Down 1.04983 2.085815 3.11362 0.3369613 0.08382526 0.09128371 XP_010094094.1 GTPase-activating protein GYP1 [Morus notabilis] -- -- nnu:104605264 K20360 "TBC1D22, GYP1" TBC1 domain family member 2 -- -- KOG1092 Ypt/Rab-specific GTPase-activating protein GYP1 [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " S ENOG410XQ68 TBC1 domain family member -- PF01496.18 V-type ATPase 116kDa subunit family TRINITY_DN12132_c0_g1_i1 15.06706219 4.930501794 25.20362258 5.111776375 2.353824724 0.000644281 0.003533812 Up 1.566285 0.3761739 0.3072674 3.805245 2.949016 2.669382 PIN07537.1 hypothetical protein CDL12_19890 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YPGG long cell-linked locus protein -- -- -- TRINITY_DN1213_c0_g1_i1 6.111051052 10.75206537 1.470036737 0.136721336 -2.870689699 0.022612323 0.074878987 Down 2.951493 1.129652 1.360382 0.6639563 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12140_c0_g1_i1 21.55583477 31.3650995 11.74657005 0.374510849 -1.416920582 0.046174237 0.132981777 Down 8.041455 8.413639 3.130379 2.972566 2.428409 0.6486165 XP_011071336.1 protein GFS12 isoform X1 [Sesamum indicum] F4JY12|GFS12_ARATH Protein GFS12 OS=Arabidopsis thaliana OX=3702 GN=GFS12 PE=1 SV=1 sind:105156811 K17601 WDR81 WD repeat-containing protein 81 -- -- KOG1786 Lysosomal trafficking regulator LYST and related BEACH and WD40 repeat proteins [TU] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Signal transduction mechanisms |Intracellular trafficking, secretion, and vesicular transport " S ENOG410XNQC beige BEACH domain containing protein "Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: ATP binding (GO:0005524);|Biological Process: protein targeting to vacuole (GO:0006623);|Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);|Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);" -- -- TRINITY_DN12147_c0_g2_i1 22.16690824 31.1947096 13.13910689 0.421196641 -1.247434165 0.02342883 0.076986551 Down 6.195091 3.591638 5.505357 0.9897309 1.444585 2.830014 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12150_c0_g1_i1 10.67137175 21.3427435 0 0 #NAME? 0.012748247 0.046618961 Down 9.546154 2.293137 1.227026 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12150_c0_g2_i1 29.12970639 45.63932233 12.62009045 0.276517919 -1.854555119 0.000221513 0.001362114 Down 5.894108 3.940928 4.46828 1.20615 0.984219 1.024894 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12154_c0_g1_i1 7.067526554 11.93281464 2.202238473 0.184553145 -2.43789177 0.030305165 0.094983247 Down 2.324906 2.786819 1.497924 0.1998606 0.6188721 0.2286442 XP_012842914.1 PREDICTED: uncharacterized protein LOC105963092 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12159_c0_g1_i1 38.44226467 76.88452934 0 0 #NAME? 1.24E-24 5.29E-23 Down 10.98091 16.8914 13.16848 0 0 0 PHU09858.1 putative inactive leucine-rich repeat receptor-like protein kinase [Capsicum chinense] -- -- -- -- -- -- -- -- -- -- -- -- -- T ENOG410XPGM inactive leucine-rich repeat receptor-like protein kinase -- -- -- TRINITY_DN12160_c0_g1_i1 16.01793472 6.819241641 25.2166278 3.697863945 1.886692145 0.005463853 0.022871695 Up 0.7682682 0.2790188 0.8010306 2.081711 1.857265 1.626496 XP_011096969.1 protein PIN-LIKES 7 isoform X1 [Sesamum indicum] Q9FKY4|PILS7_ARATH Protein PIN-LIKES 7 OS=Arabidopsis thaliana OX=3702 GN=PILS7 PE=2 SV=1 sind:105176005 K07088 K07088 uncharacterized protein -- -- KOG2722 Predicted membrane protein [S] POORLY CHARACTERIZED Function unknown S COG0679 Auxin Efflux Carrier Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: response to auxin (GO:0009733);|Biological Process: auxin-activated signaling pathway (GO:0009734);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: transmembrane transport (GO:0055085); PF03547.17 Membrane transport protein TRINITY_DN12165_c0_g1_i1 58.46544739 38.9080958 78.02279897 2.005310138 1.003825379 0.003309405 0.014860405 Up 2.538278 2.296102 2.6894 3.129773 3.812488 5.249848 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12171_c0_g1_i1 22.67181466 44.24110177 1.102527553 0.024920888 -5.326500699 1.15E-11 2.03E-10 Down 3.965223 3.309987 2.763484 0.2048685 0 1.51E-95 PRQ33508.1 "putative leucine-rich repeat domain, L domain-containing protein [Rosa chinensis]" Q9C699|RLP7_ARATH Receptor-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=RLP7 PE=3 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN12172_c0_g1_i2 15.58783823 6.996550152 24.17912631 3.455864074 1.789046475 0.006535232 0.026624823 Up 0.5362113 0.3428715 0.2011435 0.5611765 1.231459 1.132017 PIN04264.1 hypothetical protein CDL12_23199 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDXA Protein of unknown function (DUF1666) -- PF07891.11 Protein of unknown function (DUF1666) TRINITY_DN1217_c0_g1_i1 7.381466881 13.31399282 1.448940942 0.10882843 -3.199872598 0.014521802 0.052023373 Down 1.8593 1.20928 4.36707 0 0.5897227 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12188_c0_g1_i1 21.43140916 35.38749714 7.475321191 0.211241873 -2.243032254 0.000223682 0.001373405 Down 6.166421 5.467649 3.118646 1.035726 0.5219101 1.04932 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12196_c0_g1_i2 11.28525226 22.57050451 0 0 #NAME? 1.19E-07 1.30E-06 Down 2.478238 3.996084 2.528328 0 0 0 CAN71427.1 hypothetical protein VITISV_027864 [Vitis vinifera] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN12196_c0_g2_i1 21.6273808 42.4831849 0.771576693 0.018161931 -5.782938551 4.79E-12 8.71E-11 Down 2.20855 2.845299 3.24146 0 0 0.09937487 CAN71427.1 hypothetical protein VITISV_027864 [Vitis vinifera] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN12196_c0_g3_i1 11.88548803 23.77097606 0 0 #NAME? 3.48E-07 3.57E-06 Down 3.008854 5.991869 2.58819 0 0 0 XP_021620540.1 uncharacterized protein LOC110620899 [Manihot esculenta] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN12204_c0_g1_i2 18.08416047 33.20751099 2.960809953 0.089160851 -3.487445797 2.07E-06 1.89E-05 Down 3.616629 3.160172 1.610761 0.2342858 0.2281551 0.1261317 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12204_c0_g2_i1 11.2469208 21.39131405 1.102527553 0.051540899 -4.278138493 2.44E-05 0.000183193 Down 3.905723 2.300689 2.743394 0.3937332 0 0 OMO99000.1 reverse transcriptase [Corchorus capsularis] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN12207_c0_g1_i1 22.39748422 31.10117749 13.69379095 0.440298151 -1.183447309 0.029167801 0.09211173 Down 2.495706 2.93746 4.040411 1.370227 1.113102 0.8572854 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1220_c0_g1_i1 35.24871035 13.37624245 57.12117825 4.270345613 2.094352837 2.58E-06 2.32E-05 Up 1.214536 0.761902 0.6800497 3.292928 2.985367 2.717826 KZV14698.1 "hypothetical protein F511_41680, partial [Dorcoceras hygrometricum]" Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN12211_c0_g1_i2 23.2047895 33.29156791 13.11801109 0.394034043 -1.343607818 0.033063209 0.102014563 Down 1.247849 3.065843 3.10417 0.1780567 0.9018002 1.23984 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12212_c0_g1_i1 1629.330293 3120.924558 137.736028 0.044133085 -4.5019956 0 0 Down 257.3777 270.8705 275.7217 9.132569 10.09261 9.374477 EYU35669.1 hypothetical protein MIMGU_mgv1a015417mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12229_c0_g1_i1 16.30940455 7.375811559 25.24299754 3.42240272 1.775009534 0.008197458 0.032284158 Up 0.7318409 1.743631 1.704607 5.229738 3.018208 3.461351 PIN01013.1 hypothetical protein CDL12_26477 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12238_c0_g1_i1 351.2779597 503.9585952 198.5973241 0.394074684 -1.343459024 4.33E-20 1.42E-18 Down 54.66566 52.22427 58.10683 17.14081 18.35086 17.00144 XP_013747152.1 17.6 kDa class I heat shock protein 2-like [Brassica napus] Q9XIE3|HS17A_ARATH 17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6A PE=1 SV=1 bna:106450047 K13993 HSP20 HSP20 family protein ko04141 Protein processing in endoplasmic reticulum KOG0710 Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0071 response to heat Biological Process: response to reactive oxygen species (GO:0000302);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein folding (GO:0006457);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to heat (GO:0009408);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to hydrogen peroxide (GO:0042542);|Molecular Function: protein self-association (GO:0043621);|Molecular Function: unfolded protein binding (GO:0051082);|Biological Process: protein complex oligomerization (GO:0051259); PF00011.20 Hsp20/alpha crystallin family TRINITY_DN12245_c0_g1_i1 23.90095284 34.394776 13.40712968 0.389801337 -1.359189055 0.026171718 0.084322008 Down 5.221076 1.933061 5.330073 0.7738892 1.562254 1.557032 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12251_c0_g1_i1 400.2823672 578.6069668 221.9577675 0.383607147 -1.382298497 1.23E-23 5.02E-22 Down 60.41678 60.10793 71.44405 18.65312 21.46221 19.26969 XP_011081223.1 14 kDa proline-rich protein DC2.15-like [Sesamum indicum] P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YSDK - Protease inhibitor seed storage LTP family protein precursor Cellular Component: integral component of membrane (GO:0016021); "PF14547.5,PF00234.21,PF14368.5" Hydrophobic seed protein|Protease inhibitor/seed storage/LTP family|Probable lipid transfer TRINITY_DN12256_c0_g1_i1 7.981266885 15.96253377 0 0 #NAME? 1.24E-05 9.88E-05 Down 2.174716 2.045506 2.767336 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12259_c0_g1_i2 22.40324069 31.04484774 13.76163365 0.443282369 -1.173702113 0.036219321 0.109709306 Down 3.540493 3.273282 2.899228 0.9100977 1.279303 1.290351 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12271_c0_g2_i1 12.94705069 19.93592315 5.958178231 0.298866432 -1.742427227 0.022358498 0.074195431 Down 2.169671 1.250338 1.504378 0.2536385 0.4188543 0.4467877 XP_011094449.1 GDSL esterase/lipase At5g03810 [Sesamum indicum] Q9FFN0|GDL72_ARATH GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana OX=3702 GN=At5g03810 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG3240 GDSL esterase lipase Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: lipase activity (GO:0016298); PF00657.21 GDSL-like Lipase/Acylhydrolase TRINITY_DN12272_c0_g1_i2 24.66540228 12.38588587 36.94491869 2.982824085 1.576678896 0.002402225 0.011278879 Up 1.072662 0.8701501 0.7552579 2.678716 2.209366 1.425888 PIN07228.1 Cellulase [Handroanthus impetiginosus] P05522|GUN1_PERAE Endoglucanase 1 OS=Persea americana OX=3435 GN=CEL1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- G ENOG410XPC9 hydrolase family Molecular Function: cellulase activity (GO:0008810);|Biological Process: fruit ripening (GO:0009835);|Biological Process: cellulose catabolic process (GO:0030245); PF00759.18 Glycosyl hydrolase family 9 TRINITY_DN12284_c0_g3_i1 21.68381371 42.63260905 0.735018369 0.017240755 -5.858033234 1.10E-08 1.38E-07 Down 2.760289 4.22714 6.393391 0.1566702 6.70E-107 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12291_c1_g1_i1 17.04683996 30.0278851 4.065794822 0.135400639 -2.88469355 5.64E-05 0.000394932 Down 2.99221 2.049192 1.679812 0.121584 0.3563955 0.2358901 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12291_c1_g2_i1 36.58757374 68.04092611 5.134221366 0.075457841 -3.728185372 2.29E-11 3.92E-10 Down 1.898267 3.461099 2.794347 0.118549 0.2988234 0.0603415 PIN02472.1 hypothetical protein CDL12_25012 [Handroanthus impetiginosus] Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 pmum:103344202 K17604 ZSWIM3 zinc finger SWIM domain-containing protein 3 -- -- -- -- -- -- -- S ENOG41106YH transposon protein "Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: zinc ion binding (GO:0008270);" PF03101.14 FAR1 DNA-binding domain TRINITY_DN12296_c0_g1_i1 51.39149557 71.85828806 30.92470308 0.430356802 -1.216394822 0.000776666 0.004170237 Down 3.800027 4.322644 4.093147 1.014342 1.556238 1.719701 XP_012841148.1 PREDICTED: acetylajmalan esterase-like [Erythranthe guttata] Q3MKY2|AAE_RAUSE Acetylajmalan esterase OS=Rauvolfia serpentina OX=4060 GN=AAE PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YA52 GDSL-like Lipase/Acylhydrolase Biological Process: alkaloid metabolic process (GO:0009820);|Molecular Function: acetylajmaline esterase activity (GO:0033879); -- -- TRINITY_DN12297_c0_g1_i1 25.49340774 45.80267125 5.184144221 0.11318432 -3.143253981 9.31E-08 1.03E-06 Down 3.790779 4.07307 3.515025 0.6155296 0.2436938 0.2674499 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12297_c0_g2_i1 13.13639948 22.11279169 4.160007267 0.188126733 -2.41022322 0.001924772 0.009306686 Down 2.436254 3.813297 2.866699 0.2801475 0.277648 0.8686676 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12305_c0_g1_i1 19.89003888 4.597131034 35.18294673 7.653239917 2.936070627 4.65E-06 3.99E-05 Up 0 1.241442 0.5996004 3.389036 4.302219 3.097381 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12305_c1_g1_i1 17.01553291 28.33845306 5.692612756 0.200879446 -2.315598139 0.049172896 0.139801898 Down 7.309432 1.39735 3.757844 2.92E-64 0.523474 1.537591 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12307_c0_g1_i1 288.3219394 387.0388895 189.6049893 0.489886144 -1.029481607 6.42E-05 0.000443354 Down 62.54812 80.5652 91.46413 25.38358 39.76225 27.56841 XP_011081578.1 cellulose synthase A catalytic subunit 1 [UDP-forming] [Sesamum indicum] O48946|CESA1_ARATH Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana OX=3702 GN=CESA1 PE=1 SV=1 sind:105164592 K10999 CESA cellulose synthase A -- -- -- -- -- -- -- M COG1215 "Glycosyl transferase, family 2" Cellular Component: endosome (GO:0005768);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: plant-type primary cell wall biogenesis (GO:0009833);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: cellulose synthase activity (GO:0016759);|Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);|Biological Process: cellulose biosynthetic process (GO:0030244);|Biological Process: hyperosmotic salinity response (GO:0042538);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: cell wall organization (GO:0071555); -- -- TRINITY_DN12312_c0_g2_i1 16.55702248 2.637698967 30.47634598 11.55414108 3.53033811 1.69E-06 1.56E-05 Up 0.2277069 0.4419701 0.2572992 2.436656 2.656728 2.633365 KZV41155.1 CUB and sushi domain-containing protein 3 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YPAM Plastocyanin-like domain -- -- -- TRINITY_DN12323_c0_g1_i2 142.2505858 78.69565836 205.8055132 2.615207974 1.386925681 2.91E-10 4.40E-09 Up 7.162683 12.50515 8.481234 17.89149 19.50336 22.09348 PIN06272.1 hypothetical protein CDL12_21172 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111CKW NA -- -- -- TRINITY_DN12330_c0_g1_i1 22.62833257 11.81423526 33.44242989 2.830689346 1.501153429 0.00578214 0.023995361 Up 1.064838 0.958521 0.7494035 1.99125 2.052479 2.098027 XP_012830097.1 PREDICTED: ribonuclease 3-like protein 3 [Erythranthe guttata] Q69KJ0|RTL3_ORYSJ Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0358800 PE=2 SV=1 -- -- -- -- -- -- KOG0701 dsRNA-specific nuclease Dicer and related ribonucleases [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification K COG0571 "Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)" Molecular Function: RNA binding (GO:0003723);|Molecular Function: ribonuclease III activity (GO:0004525);|Biological Process: RNA processing (GO:0006396);|Molecular Function: metal ion binding (GO:0046872); "PF00636.25,PF14622.5" Ribonuclease III domain|Ribonuclease-III-like TRINITY_DN12339_c0_g1_i5 130.0788817 259.0552358 1.102527553 0.004255955 -7.876301222 1.70E-74 3.14E-72 Down 14.57283 11.88544 11.58058 0.1442598 0 9.07E-52 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12342_c0_g1_i1 3.803603808 7.607207617 0 0 #NAME? 0.006440362 0.02628314 Down 1.490639 1.394227 0.5645913 5.04E-61 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12342_c0_g2_i1 28.24910743 56.49821486 0 0 #NAME? 7.00E-11 1.13E-09 Down 3.789215 9.384735 7.235215 6.43E-62 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12342_c0_g3_i1 6.254920628 12.14760602 0.362235236 0.029819475 -5.067601326 0.012007001 0.044351353 Down 3.51975 0.8948778 1.155484 5.24E-61 0.1849573 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12347_c0_g1_i2 37.01505284 19.05950436 54.97060131 2.884156915 1.528149658 0.000390362 0.002265944 Up 1.503297 0.9661171 1.378422 2.321279 3.56118 3.185588 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y0B9 Cuticle protein -- PF00379.22 Insect cuticle protein TRINITY_DN12348_c0_g1_i1 33.46803265 21.61875191 45.31731339 2.096203961 1.067779098 0.021403929 0.071545549 Up 1.850728 2.134521 3.329808 4.801056 3.680976 3.993597 PIN21992.1 hypothetical protein CDL12_05292 [Handroanthus impetiginosus] Q25AG5|ERG3_ORYSI Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=ERG3 PE=2 SV=1 -- -- -- -- -- -- KOG1030 Predicted Ca2+-dependent phospholipid-binding protein [R] POORLY CHARACTERIZED General function prediction only S COG5038 Domain-Containing protein -- PF00168.29 C2 domain TRINITY_DN1234_c0_g1_i1 16.02534394 32.05068789 0 0 #NAME? 7.39E-10 1.06E-08 Down 6.228475 6.132677 2.76158 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12363_c0_g1_i2 12.62386929 4.232950318 21.01478826 4.964572386 2.311669459 0.002940018 0.013424829 Up 1.871217 0 0 3.184913 2.769509 1.331081 XP_011102160.2 LOW QUALITY PROTEIN: histone-lysine N-methyltransferase ASHH2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12368_c0_g1_i2 49.99275491 98.85169788 1.133811929 0.011469828 -6.446012488 2.74E-26 1.28E-24 Down 4.43964 6.998094 5.488169 0 0.04324807 0.1043739 XP_007049068.2 PREDICTED: 36.4 kDa proline-rich protein [Theobroma cacao] Q00451|PRF1_SOLLC 36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41114YU Proline-rich protein -- PF14547.5 Hydrophobic seed protein TRINITY_DN1236_c0_g1_i1 6.000772585 12.00154517 0 0 #NAME? 0.000226116 0.001386663 Down 1.138641 1.185494 1.424501 0 0 0 BAG73432.1 "nascent polypeptide-associated complex alpha subunit, partial [synthetic construct]" Q9LHG9|NACA1_ARATH Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 ppp:PHYPADRAFT_110184 K03626 "EGD2, NACA" nascent polypeptide-associated complex subunit alpha -- -- KOG2239 Transcription factor containing NAC and TS-N domains [K] INFORMATION STORAGE AND PROCESSING Transcription K COG1308 nascent polypeptide-associated complex Cellular Component: cytosol (GO:0005829);|Cellular Component: nascent polypeptide-associated complex (GO:0005854);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to salt stress (GO:0009651);|Biological Process: protein transport (GO:0015031);|Cellular Component: cytosolic ribosome (GO:0022626); PF01849.17 NAC domain TRINITY_DN12372_c0_g1_i1 234.698935 343.7787378 125.6191321 0.365406927 -1.452424112 1.17E-16 3.08E-15 Down 19.90776 23.15324 24.54403 5.704976 7.212128 7.008262 KZV46536.1 acid phosphatase 1-like [Dorcoceras hygrometricum] P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max OX=3847 GN=VSPA PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111X3R Acid phosphatase Molecular Function: nutrient reservoir activity (GO:0045735); PF03767.13 "HAD superfamily, subfamily IIIB (Acid phosphatase)" TRINITY_DN12372_c0_g2_i1 1431.678649 2053.413687 809.9436112 0.394437622 -1.342130931 7.57E-55 9.46E-53 Down 139.8409 142.9064 140.8253 46.13544 41.65841 47.02803 XP_023912101.1 acid phosphatase 1-like [Quercus suber] P27061|PPA1_SOLLC Acid phosphatase 1 OS=Solanum lycopersicum OX=4081 GN=APS1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: acid phosphatase activity (GO:0003993); PF03767.13 "HAD superfamily, subfamily IIIB (Acid phosphatase)" TRINITY_DN12374_c0_g1_i1 2138.743169 76.59640066 4200.889937 54.84448226 5.777274578 0 0 Up 11.04965 13.0482 12.47146 510.9026 521.9187 588.264 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12377_c0_g2_i2 39.36031705 52.74825147 25.97238264 0.492383765 -1.022144902 0.0148827 0.05303583 Down 7.538441 5.758997 5.68638 2.391834 2.737444 2.341566 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12379_c0_g1_i1 4.781778449 9.563556899 0 0 #NAME? 0.001395626 0.007014909 Down 2.262883 0.8251611 1.749686 0 0 0 XP_015382204.1 uncharacterized protein LOC107175308 [Citrus sinensis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41114AX NA -- PF03732.16 Retrotransposon gag protein TRINITY_DN12379_c0_g2_i1 5.797619995 11.59523999 0 0 #NAME? 0.000347404 0.002044174 Down 3.36979 2.180434 1.789117 0 0 0 XP_024020985.1 uncharacterized protein LOC112091477 [Morus notabilis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41114AX NA -- -- -- TRINITY_DN12385_c0_g1_i3 36.18428223 72.36856445 0 0 #NAME? 2.97E-23 1.18E-21 Down 5.294736 3.741368 4.857274 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12385_c0_g2_i1 19.52031738 39.04063477 0 0 #NAME? 8.60E-13 1.67E-11 Down 4.45314 2.741451 3.089125 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12386_c0_g1_i2 20.30652311 40.61304623 0 0 #NAME? 2.87E-13 5.79E-12 Down 5.272383 4.568723 3.930516 2.93E-61 1.17E-60 8.67E-70 KZV40422.1 hypothetical protein F511_31181 [Dorcoceras hygrometricum] Q9ZT92|AK10B_ARATH RNA demethylase ALKBH10B OS=Arabidopsis thaliana OX=3702 GN=ALKBH10B PE=1 SV=1 -- -- -- -- -- -- KOG4176 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG410YEYR 2OG-Fe(II) oxygenase superfamily Molecular Function: mRNA binding (GO:0003729);|Biological Process: mRNA catabolic process (GO:0006402);|Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);|Molecular Function: demethylase activity (GO:0032451);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213);|Biological Process: response to karrikin (GO:0080167);|Molecular Function: RNA N6-methyladenosine dioxygenase activity (GO:1990931); -- -- TRINITY_DN12398_c0_g1_i1 14.20519409 24.36814646 4.042241711 0.165882199 -2.591769021 0.000750356 0.004041396 Down 2.764424 1.601012 1.861302 0.18598 0.5522298 0.1930245 XP_011075729.1 probable protein S-acyltransferase 7 [Sesamum indicum] Q0WQK2|ZDHC9_ARATH Probable protein S-acyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=PAT07 PE=1 SV=1 -- -- -- -- -- -- KOG1311 DHHC-type Zn-finger proteins [R] POORLY CHARACTERIZED General function prediction only S COG5273 "Zinc finger, DHHC-type containing" Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: protein targeting to membrane (GO:0006612);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: peptidyl-L-cysteine S-palmitoylation (GO:0018230);|Molecular Function: protein-cysteine S-palmitoyltransferase activity (GO:0019706); -- -- TRINITY_DN12403_c0_g1_i2 8.725803266 17.45160653 0 0 #NAME? 0.003505313 0.015616516 Down 6.869758 1.168373 2.497918 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12404_c0_g1_i1 13.56287701 6.061402224 21.0643518 3.475161525 1.797080035 0.016933648 0.058944433 Up 0.3191272 0.3783818 0.7279097 1.434423 1.509269 0.9651988 PIN02012.1 hypothetical protein CDL12_25476 [Handroanthus impetiginosus] Q9LI89|FBK70_ARATH F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana OX=3702 GN=At3g27150 PE=2 SV=1 -- -- -- -- -- -- KOG1072 FOG: Kelch repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG4110X8D Kelch repeat-containing F-box family protein Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829); "PF13964.5,PF01344.24,PF13418.5,PF13415.5,PF07646.14" "Kelch motif|Kelch motif|Galactose oxidase, central domain|Galactose oxidase, central domain|Kelch motif" TRINITY_DN1240_c0_g1_i1 9.541960293 0 19.08392059 Inf Inf 0.000135178 0.000872106 Up 0 0 0 0.7448635 3.802171 4.563357 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12413_c0_g1_i1 53.27904707 106.1958589 0.362235236 0.003411011 -8.195584907 2.82E-32 1.71E-30 Down 4.428735 4.913411 5.225011 0 0.05309905 0 XP_020549848.1 "GDSL esterase/lipase At1g29670-like, partial [Sesamum indicum]" Q9C7N4|GDL15_ARATH GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana OX=3702 GN=At1g29670 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Cellular Component: cell wall (GO:0005618);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid (GO:0009534);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);|Cellular Component: apoplast (GO:0048046);" PF00657.21 GDSL-like Lipase/Acylhydrolase TRINITY_DN12419_c0_g1_i1 23.19456393 13.507906 32.88122186 2.434220512 1.283459865 0.017935252 0.061878458 Up 1.330317 3.978251 2.873497 5.12303 7.030348 4.135736 EPQ26307.1 hypothetical protein PFL1_06242 [Anthracocystis flocculosa PF-1] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG411254W NA -- PF05532.11 CsbD-like TRINITY_DN12421_c0_g2_i3 156.1910996 232.2531129 80.12908632 0.345007588 -1.535300002 6.40E-13 1.26E-11 Down 4.321021 5.028604 4.710237 1.389395 1.040151 1.498846 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12423_c0_g1_i1 22.36886582 13.74974116 30.98799047 2.253714459 1.172304741 0.032821399 0.101493058 Up 1.068526 0.4889427 0.7185544 1.564643 0.9075918 1.653454 KYP48029.1 "Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan]" P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only ADL COG5049 5'-3' exoribonuclease Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN12423_c1_g1_i1 12.49448863 23.90227156 1.086705707 0.045464537 -4.459114533 0.000563171 0.003139773 Down 3.189286 1.043235 4.471036 6.72E-66 0.3422283 0 CAN61630.1 hypothetical protein VITISV_003191 [Vitis vinifera] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only ADL COG5049 5'-3' exoribonuclease Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN12429_c0_g1_i2 29.08070404 46.38476096 11.77664712 0.253890435 -1.977722052 6.59E-05 0.000454282 Down 6.676134 4.710578 5.937389 1.045143 0 2.4632 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12430_c0_g1_i2 35.774658 71.549316 0 0 #NAME? 5.41E-23 2.11E-21 Down 4.666291 3.872506 4.430027 0 0 0 PIN19683.1 hypothetical protein CDL12_07637 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12447_c0_g1_i3 9.212797629 16.58559202 1.840003238 0.110939859 -3.1721503 0.001862485 0.009036319 Down 2.406389 1.697537 1.479265 0.1098821 0.3309484 0.1233158 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12448_c0_g1_i1 122.9049235 242.7966569 3.013190124 0.012410344 -6.332313041 1.25E-64 1.89E-62 Down 41.42272 35.95665 40.69422 0.5672597 0 0.5882198 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12454_c0_g1_i2 7.353847077 14.70769415 0 0 #NAME? 0.007419788 0.029645843 Down 3.416484 2.516747 0 0 0 0 KRH32277.1 hypothetical protein GLYMA_10G042000 [Glycine max] Q41228|PSAEA_NICSY "Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=PSAEA PE=1 SV=1" gmx:100499814 K02693 psaE photosystem I subunit IV ko00195 Photosynthesis -- -- -- -- -- C ENOG41122QJ "Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase (By similarity)" Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: photosystem I reaction center (GO:0009538);|Biological Process: photosynthesis (GO:0015979); PF02427.16 Photosystem I reaction centre subunit IV / PsaE TRINITY_DN12465_c0_g1_i3 21.47212682 29.80268943 13.1415642 0.440952292 -1.181305521 0.038637527 0.115356043 Down 3.703949 2.629759 2.42727 0.2806201 1.133434 1.784544 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12476_c0_g1_i1 15.51491138 23.25765171 7.772171041 0.334176947 -1.581315882 0.021309162 0.071297028 Down 2.287216 2.084598 2.09068 0.7707662 0.5692809 0.4190858 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12482_c0_g1_i1 4.122952589 7.521434706 0.724470471 0.096320782 -3.376009088 0.039982455 0.118592132 Down 0.8590058 1.910725 1.311099 0 0.2487384 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12484_c0_g1_i2 18.03941114 8.07028025 28.00854204 3.470578613 1.795176208 0.006994999 0.028236902 Up 0.6802932 0.1664045 1.459889 1.816176 1.971091 2.791247 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12485_c0_g1_i1 29.46543907 58.93087814 0 0 #NAME? 4.70E-19 1.45E-17 Down 5.918066 8.95264 6.948593 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12489_c0_g1_i1 22.16803202 42.16265263 2.173411413 0.051548261 -4.277932437 1.50E-09 2.10E-08 Down 9.296829 8.915964 8.789865 0 1.083148 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12489_c0_g2_i1 115.3939135 166.9632635 63.82456343 0.382267105 -1.387347036 1.36E-07 1.47E-06 Down 15.53672 15.91076 21.98334 5.261554 5.949471 5.224404 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12489_c1_g1_i1 35.59163529 60.68175404 10.50151653 0.173058882 -2.530665105 6.40E-08 7.26E-07 Down 9.228405 10.93976 10.50395 1.433801 0.7421626 2.073447 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12501_c0_g1_i2 23.44844617 11.94013613 34.95675621 2.927668147 1.549752032 0.004220395 0.018332669 Up 1.340872 2.140648 1.523971 3.57003 4.060607 4.285867 XP_011086790.1 uncharacterized protein LOC105168419 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG411299P drought-induced protein 1 -- -- -- TRINITY_DN12506_c0_g1_i2 11.15581441 17.55510522 4.756523601 0.270948168 -1.883911201 0.032838404 0.101534885 Down 2.603412 1.466693 0.9390854 0.7275913 0.2902531 2.47E-67 PIN15507.1 hypothetical protein CDL12_11840 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YQM1 Protein of unknown function (DUF1645) -- -- -- TRINITY_DN12507_c0_g2_i1 12.54241967 21.31062043 3.77421892 0.17710507 -2.497322583 0.005089917 0.021504712 Down 3.613894 1.553712 1.552614 0.1829591 0.180739 0.5579198 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12508_c0_g1_i2 18.20434925 36.40869849 0 0 #NAME? 5.25E-12 9.53E-11 Down 2.021175 1.64408 1.737877 0 0 0 XP_012839839.1 PREDICTED: putative nuclease HARBI1 [Erythranthe guttata] -- -- -- -- -- -- -- -- KOG4585 Predicted transposase [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG411206Y transposon protein -- PF01609.20 Transposase DDE domain TRINITY_DN1250_c0_g1_i1 10.54724995 18.4410877 2.653412205 0.143885884 -2.797003033 0.001686035 0.008286506 Down 1.732375 2.067095 2.653325 0 0.1938837 0.5910859 PIN16167.1 "Sister chromatid cohesion complex Cohesin, subunit PDS5 [Handroanthus impetiginosus]" Q9HFF5|PDS5_SCHPO Sister chromatid cohesion protein pds5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pds5 PE=1 SV=1 sind:105155372 K11267 PDS5 sister chromatid cohesion protein PDS5 -- -- KOG1525 "Sister chromatid cohesion complex Cohesin, subunit PDS5" [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " S ENOG410XQW7 "PDS5, regulator of cohesion maintenance, homolog" "Cellular Component: nuclear chromosome (GO:0000228);|Cellular Component: chromatin (GO:0000785);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA repair (GO:0006281);|Biological Process: mitotic sister chromatid cohesion (GO:0007064);|Cellular Component: nuclear pericentric heterochromatin (GO:0031618);|Biological Process: establishment of mitotic sister chromatid cohesion (GO:0034087);|Biological Process: maintenance of mitotic sister chromatid cohesion (GO:0034088);|Biological Process: protein localization to kinetochore (GO:0034501);|Biological Process: cell division (GO:0051301);|Biological Process: attachment of spindle microtubules to kinetochore involved in meiotic sister chromatid segregation (GO:0051456);|Biological Process: protein localization to chromatin (GO:0071168);|Biological Process: protein localization to chromosome, centromeric region (GO:0071459);|Cellular Component: Wpl/Pds5 cohesin loading/unloading complex (GO:0090695);|Biological Process: protein localization to nuclear pericentric heterochromatin (GO:1902682);|Biological Process: positive regulation of mitotic cohesin unloading (GO:1905411);|Biological Process: negative regulation of mitotic cohesin loading (GO:1905412);" -- -- TRINITY_DN12516_c0_g1_i1 28.4977052 41.30483502 15.69057538 0.379872608 -1.396412411 0.005109339 0.021572712 Down 5.739384 4.182526 3.804301 0.9852983 1.325421 1.934173 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12517_c0_g1_i1 215.6333986 138.5833157 292.6834816 2.111967665 1.078587747 3.07E-09 4.14E-08 Up 9.885047 8.437913 10.72006 15.10788 16.69517 17.74096 XP_012840654.1 PREDICTED: metalloendoproteinase 1-like [Erythranthe guttata] O04529|2MMP_ARATH Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1 -- -- -- -- -- -- KOG1565 Gelatinase A and related matrix metalloproteases [OW] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones |Extracellular structures " O ENOG410XQ5D matrix metallopeptidase "Molecular Function: metalloendopeptidase activity (GO:0004222);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: multicellular organism development (GO:0007275);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to jasmonic acid (GO:0009753);|Cellular Component: extracellular matrix (GO:0031012);|Cellular Component: anchored component of membrane (GO:0031225);|Biological Process: response to cadmium ion (GO:0046686);|Biological Process: developmental vegetative growth (GO:0080186);|Biological Process: negative regulation of leaf senescence (GO:1900056);|Biological Process: regulation of photoperiodism, flowering (GO:2000028);" "PF00413.23,PF01471.17" Matrixin|Putative peptidoglycan binding domain TRINITY_DN12526_c0_g1_i2 6.231435865 10.59404143 1.868830298 0.176403907 -2.503045582 0.03112754 0.097138211 Down 0.889067 0.763348 1.627585 0.1907529 0.0949473 0.2203418 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12529_c0_g1_i1 22.98426177 5.150618166 40.81790537 7.924855629 2.986384653 9.96E-07 9.56E-06 Up 0.1793803 0.8657494 1.233176 3.542921 5.864086 4.759704 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1252_c0_g1_i1 13.8664817 27.7329634 0 0 #NAME? 0.007971027 0.03150447 Down 0.9801024 3.898327 12.86762 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12530_c0_g1_i1 94.62116677 53.92083866 135.3214949 2.509632607 1.327476179 1.03E-06 9.87E-06 Up 7.981596 7.357543 9.245824 13.52933 16.09214 20.19872 XP_011098748.1 uncharacterized protein LOC105177327 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41115ZU NA -- -- -- TRINITY_DN12533_c0_g1_i1 10.74818577 21.49637153 0 0 #NAME? 2.66E-07 2.78E-06 Down 2.306206 1.761248 1.630855 0 0 0 XP_019161862.1 PREDICTED: uncharacterized protein LOC109158407 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF02992.13 Transposase family tnp2 TRINITY_DN12533_c0_g2_i1 3.894158566 7.788317133 0 0 #NAME? 0.004621325 0.019818793 Down 0.4853262 1.825436 2.240067 0 0 0 XP_021636690.1 uncharacterized protein LOC110632687 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41104TD "CACTA, En Spm sub-class" -- PF02992.13 Transposase family tnp2 TRINITY_DN12535_c0_g1_i1 34.31672746 68.63345492 0 0 #NAME? 3.39E-22 1.27E-20 Down 3.277297 3.369232 4.191638 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12535_c0_g2_i1 127.9394518 255.8789035 0 0 #NAME? 1.33E-78 2.61E-76 Down 8.513908 9.754757 8.60086 0 0 0 GAU46205.1 "hypothetical protein TSUD_401650, partial [Trifolium subterraneum]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12546_c0_g1_i1 16.62287118 26.99808623 6.247656134 0.231411074 -2.111470189 0.001963751 0.009472961 Down 4.947426 5.620643 5.211136 2.980694 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12548_c0_g1_i1 30.3198322 60.6396644 0 0 #NAME? 1.16E-19 3.73E-18 Down 3.565734 2.951591 3.834928 0 0 0 XP_011089416.1 licodione synthase-like [Sesamum indicum] O81973|C93A3_SOYBN Cytochrome P450 93A3 OS=Glycine max OX=3847 GN=CYP93A3 PE=2 SV=1 sind:105170377 K07408 CYP1A1 cytochrome P450 family 1 subfamily A polypeptide 1 ko00380 Tryptophan metabolism KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);" -- -- TRINITY_DN12548_c0_g2_i1 65.35082124 130.3341333 0.367509184 0.002819746 -8.470218942 1.43E-39 1.13E-37 Down 6.496094 8.209337 7.892602 0.06267484 0 0 XP_011089416.1 licodione synthase-like [Sesamum indicum] O81973|C93A3_SOYBN Cytochrome P450 93A3 OS=Glycine max OX=3847 GN=CYP93A3 PE=2 SV=1 sind:105170377 K07408 CYP1A1 cytochrome P450 family 1 subfamily A polypeptide 1 ko00380 Tryptophan metabolism KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);" -- -- TRINITY_DN12548_c0_g3_i1 5.033799036 10.06759807 0 0 #NAME? 0.000946829 0.004973317 Down 1.121566 1.078874 1.28889 0 0 0 XP_011089416.1 licodione synthase-like [Sesamum indicum] O81973|C93A3_SOYBN Cytochrome P450 93A3 OS=Glycine max OX=3847 GN=CYP93A3 PE=2 SV=1 sind:105170377 K07408 CYP1A1 cytochrome P450 family 1 subfamily A polypeptide 1 ko00380 Tryptophan metabolism KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);" -- -- TRINITY_DN12548_c2_g1_i1 3.65255967 7.305119339 0 0 #NAME? 0.006227247 0.025532781 Down 1.071588 0.7782459 2.728168 0 0 0 XP_011089416.1 licodione synthase-like [Sesamum indicum] -- -- sind:105170377 K07408 CYP1A1 cytochrome P450 family 1 subfamily A polypeptide 1 ko00380 Tryptophan metabolism -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12554_c0_g1_i2 15.44841841 0.984156182 29.91268065 30.39424146 4.925726109 3.99E-08 4.66E-07 Up 0 0 0.5236725 4.369331 5.286557 3.076094 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12556_c0_g1_i2 28.52238737 52.51725829 4.527516451 0.086210069 -3.535999813 7.89E-10 1.13E-08 Down 5.525087 6.523829 4.360582 0.3121894 0.1559555 0.6480006 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12560_c0_g2_i1 21.9443697 30.49179831 13.3969411 0.439362118 -1.186517609 0.042920998 0.125503275 Down 3.969854 2.493153 1.626436 1.074316 0.807067 1.048442 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12565_c0_g1_i2 29.7609905 18.86331416 40.65866685 2.155436023 1.107979742 0.014674076 0.052444717 Up 1.242571 1.145079 0.6809618 1.822792 2.171997 1.342764 XP_012828310.1 PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Erythranthe guttata] Q9ZSA7|DLO2_ARATH Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana OX=3702 GN=DLO2 PE=2 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: defense response to oomycetes (GO:0002229);|Biological Process: salicylic acid catabolic process (GO:0046244);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213); "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN12576_c0_g1_i1 10.85892344 5.302441707 16.41540517 3.095820016 1.630321599 0.044707506 0.129562118 Up 1.113272 1.083045 0.8425485 3.047987 1.533711 2.806459 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1257_c0_g1_i1 3.981831979 7.963663959 0 0 #NAME? 0.014821644 0.052868055 Down 0.8299207 0.8104267 3.138334 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12583_c0_g2_i1 18.18484582 36.36969163 0 0 #NAME? 5.34E-12 9.68E-11 Down 4.122474 2.865103 3.448484 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12583_c0_g3_i1 22.27539603 44.55079206 0 0 #NAME? 1.17E-14 2.63E-13 Down 3.213713 3.325244 4.161918 0 1.35E-85 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12591_c0_g1_i1 13.12509893 21.73041267 4.519785186 0.207993528 -2.265389461 0.019710897 0.067020745 Down 1.508508 3.750367 1.433962 0.5674591 0 0.584623 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12595_c0_g1_i1 28.60004094 40.51911124 16.68097064 0.411681553 -1.28039929 0.007701399 0.030628141 Down 2.455037 2.20197 3.440196 1.3644 0.6485495 0.7004688 PIN04898.1 Cytochrome P450 CYP2 subfamily [Handroanthus impetiginosus] P48418|C75A1_PETHY "Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida OX=4102 GN=CYP75A1 PE=1 SV=1" -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN12608_c0_g1_i1 9.769377913 16.93244984 2.606305982 0.153923739 -2.69971235 0.032088156 0.099635929 Down 3.003134 5.341569 0.9246021 0 0.5794663 0.5871364 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12610_c0_g1_i1 52.14020328 34.02588404 70.25452251 2.06473761 1.045958454 0.029448311 0.092823221 Up 4.265162 7.462525 5.159883 11.35333 5.139497 11.57723 XP_012834276.1 PREDICTED: putative leucine-rich repeat-containing protein DDB_G0290503 isoform X2 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12616_c0_g1_i1 28.34907688 43.7397405 12.95841326 0.296261777 -1.755055588 0.000529125 0.002967822 Down 8.429631 5.253237 6.574425 0.5312332 2.638522 1.571062 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12619_c0_g1_i2 13.36100382 22.64039097 4.081616668 0.180280308 -2.471686271 0.026197165 0.084386028 Down 3.821946 0.842005 5.43499 0.6877819 0.3499421 0.3821282 XP_020553315.1 E3 ubiquitin-protein ligase ATL42 [Sesamum indicum] Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 SV=2 sind:105173540 K10664 ATL6S E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN1261_c0_g1_i1 9.262051545 15.98845644 2.535646649 0.158592336 -2.656605045 0.006893101 0.027885085 Down 4.555839 2.203202 2.61297 0 1.161781 0 CAN79884.1 hypothetical protein VITISV_002539 [Vitis vinifera] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF13976.5 GAG-pre-integrase domain TRINITY_DN12632_c0_g1_i1 310.9142659 188.2928532 433.5356787 2.302454243 1.203172486 4.61E-15 1.07E-13 Up 4.865649 5.593287 5.513904 10.07111 10.10793 9.446115 PIN23033.1 "26S proteasome regulatory complex, subunit PSMD10 [Handroanthus impetiginosus]" A2CIR5|NPR4_ORYSJ Ankyrin repeat-containing protein NPR4 OS=Oryza sativa subsp. japonica OX=39947 GN=NPR4 PE=2 SV=1 -- -- -- -- -- -- KOG0504 FOG: Ankyrin repeat [R] POORLY CHARACTERIZED General function prediction only S COG0666 Ankyrin Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021); "PF13962.5,PF12796.6,PF13637.5,PF13606.5,PF13857.5,PF00023.29" Domain of unknown function|Ankyrin repeats (3 copies)|Ankyrin repeats (many copies)|Ankyrin repeat|Ankyrin repeats (many copies)|Ankyrin repeat TRINITY_DN12634_c0_g1_i2 21.92555859 13.19005364 30.66106354 2.324559429 1.21695731 0.025903061 0.083604783 Up 1.807049 1.599384 1.4274 3.976968 3.056049 1.947366 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12635_c0_g1_i1 6.419693942 11.2962345 1.543153387 0.136607768 -2.871888567 0.014227489 0.051094018 Down 0.4260706 1.345243 1.217709 1.25E-57 1.49E-75 0.3107716 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12642_c0_g1_i1 18.03894143 35.35341238 0.724470471 0.020492236 -5.608778776 6.24E-10 9.09E-09 Down 4.029963 4.496017 5.533674 0 0.2388494 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12649_c0_g1_i2 22.17541784 44.35083567 0 0 #NAME? 6.77E-10 9.81E-09 Down 12.30861 5.693702 7.01854 0 0 1.96E-55 XP_012849888.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Erythranthe guttata] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN12651_c0_g1_i1 20.70647392 9.54495572 31.86799212 3.338726031 1.739297714 0.005093208 0.021512607 Up 0.1856293 0.7065361 1.831851 2.846628 2.515723 2.10811 XP_022034436.1 uncharacterized protein LOC110936375 [Helianthus annuus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111J8C NA -- -- -- TRINITY_DN12656_c0_g1_i1 37.81842921 23.98648567 51.65037275 2.153311388 1.106556961 0.010659834 0.040092953 Up 1.816479 0.8772958 2.228662 2.49178 3.118528 3.024138 XP_012829488.1 PREDICTED: uncharacterized protein LOC105950667 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG411164Q Arabidopsis protein of unknown function -- PF03087.13 Arabidopsis protein of unknown function TRINITY_DN1265_c0_g1_i1 6.686342364 11.05795465 2.31473008 0.209327145 -2.256168684 0.040845832 0.120619616 Down 2.684021 1.601892 2.119601 0 0 1.114246 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12666_c0_g1_i1 18.65602767 29.32017503 7.991880307 0.272572735 -1.875286835 0.002006202 0.009662337 Down 2.494781 3.245335 4.411776 0.5742421 0 1.685362 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12669_c0_g1_i1 32.04286751 64.08573502 0 0 #NAME? 9.00E-21 3.10E-19 Down 6.159416 8.074706 8.636774 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12671_c0_g1_i2 11.04675185 16.85979594 5.23370776 0.310425332 -1.687681801 0.03734764 0.112332455 Down 1.903892 1.625707 2.274966 0.3885259 0.3883082 0.6156858 PNT12544.1 hypothetical protein POPTR_011G091200v3 [Populus trichocarpa] Q9C8G9|AB1C_ARATH ABC transporter C family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCC1 PE=1 SV=1 -- -- -- -- -- -- KOG0054 "Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1132 (ABC) transporter "Cellular Component: plant-type vacuole (GO:0000325);|Molecular Function: calmodulin binding (GO:0005516);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Molecular Function: xenobiotic transmembrane transporting ATPase activity (GO:0008559);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: ATPase-coupled arsenite transmembrane transporter activity (GO:0015446);|Biological Process: arsenite transport (GO:0015700);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: response to arsenic-containing substance (GO:0046685);|Biological Process: transmembrane transport (GO:0055085);|Molecular Function: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity (GO:1902417);|Biological Process: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport (GO:1902418);" -- -- TRINITY_DN12672_c0_g1_i1 31.17501086 45.41720945 16.93281227 0.372828108 -1.423417464 0.003062448 0.013913892 Down 5.090027 4.85534 4.176284 0.9975874 2.350849 0.9351948 XP_022868431.1 elongation of fatty acids protein 3-like [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG3071 Fatty acyl-CoA elongase/Polyunsaturated fatty acid specific elongation enzyme [I] METABOLISM Lipid transport and metabolism I ENOG410XRWT elongation of very long chain fatty acids protein -- PF01151.17 GNS1/SUR4 family TRINITY_DN12679_c0_g1_i2 12.48211562 5.656218144 19.3080131 3.413590603 1.771290044 0.027443075 0.087708479 Up 0.1031324 0.2993882 0.7112351 1.096895 1.098916 1.0358 PIM98632.1 hypothetical protein CDL12_28885 [Handroanthus impetiginosus] Q8LC45|XTH33_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana OX=3702 GN=XTH33 PE=2 SV=2 sind:105156601 K08235 E2.4.1.207 xyloglucan:xyloglucosyl transferase -- -- -- -- -- -- -- G COG2273 hydrolase family 16 "Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);|Cellular Component: cell wall (GO:0005618);|Cellular Component: integral component of plasma membrane (GO:0005887);|Biological Process: plant-type cell wall modification involved in multidimensional cell growth (GO:0009831);|Biological Process: xyloglucan metabolic process (GO:0010411);|Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762);|Biological Process: cell wall biogenesis (GO:0042546);|Cellular Component: apoplast (GO:0048046);" -- -- TRINITY_DN12682_c0_g1_i2 22.58430643 45.16861287 0 0 #NAME? 0.000906666 0.00478228 Down 8.128292 9.789489 0 0 0 0 KHN26797.1 "Photosystem II 10 kDa polypeptide, chloroplastic [Glycine soja]" Q40163|PSBR_SOLLC "Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSBR PE=2 SV=1" gmx:100499745 K03541 psbR photosystem II 10kDa protein ko00195 Photosynthesis -- -- -- -- -- S ENOG4112AV0 Photosystem II 10 kDa polypeptide Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: photosystem II oxygen evolving complex (GO:0009654);|Biological Process: response to cytokinin (GO:0009735);|Biological Process: photosystem II oxygen evolving complex assembly (GO:0010270); PF04725.11 Photosystem II 10 kDa polypeptide PsbR TRINITY_DN12688_c0_g1_i1 45.10932366 90.21864732 0 0 #NAME? 6.62E-26 3.03E-24 Down 5.542132 8.748401 6.408611 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12688_c0_g2_i1 53.4840009 104.7945904 2.173411413 0.020739729 -5.591459142 4.30E-27 2.12E-25 Down 14.67568 10.38828 15.35545 0 0.6390869 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12688_c0_g3_i1 17.50115793 35.00231585 0 0 #NAME? 1.15E-11 2.02E-10 Down 4.23769 3.886486 5.573265 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1268_c0_g1_i1 14.39206224 22.70572338 6.078401103 0.267703477 -1.901292216 0.008213345 0.032335504 Down 5.188445 3.814227 3.54036 0 0.7030529 2.139604 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12695_c0_g1_i2 28.74941864 18.01702192 39.48181535 2.191361897 1.131827761 0.015270773 0.054172099 Up 2.074766 3.705923 1.333711 4.199116 3.675478 4.777132 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12698_c0_g1_i1 9.087191718 15.08807666 3.086306774 0.204552697 -2.289455536 0.014848716 0.052943818 Down 1.994158 3.893102 1.937358 0 0 1.267728 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12702_c0_g1_i1 39.19522551 25.78253399 52.60791702 2.040447888 1.028885865 0.014479461 0.051896265 Up 3.758865 5.8374 5.680533 7.909882 7.098016 10.24634 KJB41079.1 hypothetical protein B456_007G089200 [Gossypium raimondii] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y5J2 NA -- -- -- TRINITY_DN12705_c0_g1_i1 23.71563672 41.9977449 5.433528533 0.129376674 -2.95035057 1.12E-06 1.07E-05 Down 8.161694 5.891373 6.684588 0 2.215263 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12706_c0_g1_i2 118.3390749 69.06720675 167.610943 2.426780391 1.279043559 1.23E-07 1.34E-06 Up 4.014985 5.568167 5.270012 9.382457 9.717595 9.960261 CAJ34820.1 "hypothetical protein 12, partial [Plantago major]" Q9SY06|FAF1_ARATH Protein FANTASTIC FOUR 1 OS=Arabidopsis thaliana OX=3702 GN=FAF1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41115QF Protein of unknown function (DUF3049) -- PF11250.7 Fantastic Four meristem regulator TRINITY_DN12711_c0_g1_i1 7.842794008 2.199708423 13.48587959 6.130757809 2.616065413 0.008923683 0.034645293 Up 0.7918338 0 0.1494998 1.680031 0.9338681 2.15665 PIN17438.1 hypothetical protein CDL12_09897 [Handroanthus impetiginosus] Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG41115GS Myb-like DNA-binding domain "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);" PF00249.30 Myb-like DNA-binding domain TRINITY_DN12717_c0_g1_i4 8.617371153 16.84895396 0.385788347 0.022896872 -5.448705651 3.27E-05 0.000240139 Down 2.015484 1.574657 4.04566 0 0 0.1998166 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12717_c0_g2_i1 7.085764957 14.17152991 0 0 #NAME? 5.77E-05 0.000402774 Down 2.313325 2.567378 1.15159 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12722_c0_g1_i1 12.46101653 19.6883253 5.23370776 0.265827981 -1.911435126 0.014776271 0.052747661 Down 2.799266 2.751359 2.170696 0.4597961 0.4629052 0.7311423 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12729_c0_g1_i2 21.03034744 7.663537366 34.39715752 4.4884178 2.166206974 0.000537038 0.003008485 Up 0 0.9533084 2.005314 3.266661 2.668384 4.755469 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12734_c0_g1_i1 26.08646223 0 52.17292445 Inf Inf 1.30E-18 3.89E-17 Up 1.78E-59 7.02E-74 9.00E-66 2.422352 1.37528 2.208267 XP_018503363.1 "PREDICTED: thiamine thiazole synthase, chloroplastic [Pyrus x bretschneideri]" O23787|THI4_CITSI "Thiamine thiazole synthase, chloroplastic OS=Citrus sinensis OX=2711 GN=THI1 PE=2 SV=1" pxb:103948770 K03146 "THI4, THI1" thiamine thiazole synthase ko00730 Thiamine metabolism KOG2960 Protein involved in thiamine biosynthesis and DNA damage tolerance [R] POORLY CHARACTERIZED General function prediction only H COG1635 "Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron-dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance (By similarity)" Cellular Component: cytosol (GO:0005829);|Biological Process: thiamine biosynthetic process (GO:0009228);|Cellular Component: chloroplast stroma (GO:0009570);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: thiazole biosynthetic process (GO:0052837); "PF01946.16,PF01266.23,PF00890.23,PF13450.5" Thi4 family|FAD dependent oxidoreductase|FAD binding domain|NAD(P)-binding Rossmann-like domain TRINITY_DN12743_c0_g1_i1 13.0458791 5.455386348 20.63637186 3.782751677 1.919436072 0.016367982 0.057385902 Up 0.3964462 0.6432539 0.6110987 1.120452 2.714865 1.079796 OMO70245.1 "Glycoside hydrolase, family 9 [Corchorus capsularis]" P0C1U4|GUN9_ORYSJ Endoglucanase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=GLU1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG410XP0H endoglucanase Molecular Function: cellulase activity (GO:0008810);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: cellulose catabolic process (GO:0030245);|Biological Process: cell wall organization (GO:0071555); PF00759.18 Glycosyl hydrolase family 9 TRINITY_DN12747_c0_g2_i1 4.264767947 7.794517526 0.735018369 0.094299405 -3.406607514 0.033986305 0.10433791 Down 1.381582 1.712671 1.588017 0.3647647 0 0 XP_022867097.1 uncharacterized protein LOC111386847 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDXJ NA -- -- -- TRINITY_DN12747_c0_g3_i1 22.48317544 30.6106582 14.35569267 0.468976935 -1.092411124 0.044888318 0.129991414 Down 2.784258 2.227321 3.652367 1.711086 1.07852 0.4755475 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12760_c0_g1_i1 38.929482 69.27620063 8.582763375 0.123891947 -3.01284568 1.17E-10 1.86E-09 Down 10.95058 15.82655 12.04237 0.4509334 1.578672 1.695507 PIN13509.1 hypothetical protein CDL12_13867 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12769_c0_g1_i1 19.36990511 10.35884437 28.38096585 2.739781084 1.454060623 0.013876624 0.05010543 Up 1.883241 1.817153 1.270872 2.030732 4.121458 5.10808 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12772_c0_g1_i1 10.99922551 21.99845102 0 0 #NAME? 1.41E-07 1.53E-06 Down 2.285362 1.554593 3.141772 0 0 0 XP_022896741.1 "amidophosphoribosyltransferase, chloroplastic-like [Olea europaea var. sylvestris]" Q9STG9|ASE2_ARATH "Amidophosphoribosyltransferase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ASE2 PE=1 SV=1" thj:104807289 K00764 "purF, PPAT" amidophosphoribosyltransferase ko00230|ko00250 "Purine metabolism|Alanine, aspartate and glutamate metabolism" KOG0572 Glutamine phosphoribosylpyrophosphate amidotransferase [F] METABOLISM Nucleotide transport and metabolism J COG0858 Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA (By similarity) Molecular Function: amidophosphoribosyltransferase activity (GO:0004044);|Biological Process: purine nucleotide biosynthetic process (GO:0006164);|Biological Process: 'de novo' IMP biosynthetic process (GO:0006189);|Biological Process: glutamine metabolic process (GO:0006541);|Biological Process: purine nucleobase biosynthetic process (GO:0009113);|Biological Process: nucleoside metabolic process (GO:0009116);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid stroma (GO:0009532);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: chloroplast organization (GO:0009658);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: iron-sulfur cluster binding (GO:0051536); -- -- TRINITY_DN12772_c0_g2_i2 15.24713588 24.22096451 6.273307244 0.259003197 -1.948958189 0.0059217 0.024492368 Down 1.645952 1.474853 1.412029 0.2083598 0.4780019 0.2315038 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12773_c0_g1_i1 50.33121073 17.659725 83.00269646 4.700112627 2.232695328 3.77E-09 5.04E-08 Up 0.8882191 1.654444 0.8853616 3.423759 4.590322 4.941822 XP_019441400.1 PREDICTED: myb-related protein 340-like [Lupinus angustifolius] Q9C9G7|MYB62_ARATH Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1 vvi:100259502 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: gibberellin biosynthetic process (GO:0009686);|Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: root morphogenesis (GO:0010015);|Biological Process: negative regulation of gibberellin biosynthetic process (GO:0010373);|Biological Process: cellular response to phosphate starvation (GO:0016036);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Biological Process: phosphate ion homeostasis (GO:0055062);" "PF00249.30,PF13921.5" Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN12776_c0_g1_i1 21.63657369 43.27314738 0 0 #NAME? 3.94E-14 8.48E-13 Down 8.959966 6.482475 7.024925 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12780_c1_g2_i1 20.40745825 32.4530697 8.361846807 0.257659657 -1.95646143 0.001919858 0.009285895 Down 3.527447 2.202965 4.608967 0.2618314 0.2607811 1.651953 EYU35692.1 "hypothetical protein MIMGU_mgv1a025168mg, partial [Erythranthe guttata]" Q9SYM9|Y1853_ARATH Receptor-like serine/threonine-protein kinase At1g78530 OS=Arabidopsis thaliana OX=3702 GN=At1g78530 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN12784_c0_g1_i1 19.51289306 31.66787117 7.357914952 0.232346371 -2.105650982 0.046831241 0.134485387 Down 5.081607 10.58637 3.154373 2.945193 0.3539491 0.256215 KZV17493.1 pleiotropic drug resistance protein 1-like [Dorcoceras hygrometricum] Q0JLC5|AB36G_ORYSJ ABC transporter G family member 36 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG36 PE=2 SV=1 -- -- -- -- -- -- KOG0065 "Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG0842 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: transmembrane transport (GO:0055085);" PF01061.23 ABC-2 type transporter TRINITY_DN1279_c0_g1_i1 4.125335773 8.250671545 0 0 #NAME? 0.009460944 0.036401139 Down 0.5498005 3.142847 1.253272 0 0 0 XP_020549562.1 uncharacterized protein LOC110011996 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03108.14 MuDR family transposase TRINITY_DN1279_c0_g2_i1 7.617629307 15.23525861 0 0 #NAME? 2.59E-05 0.000193779 Down 2.469012 2.545399 1.495251 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12801_c0_g1_i7 646.8511515 918.1932832 375.5090197 0.408965113 -1.289950317 1.65E-29 9.13E-28 Down 28.68537 30.22576 26.2727 8.871571 9.372178 9.873418 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12813_c0_g1_i1 8.729428571 15.26962388 2.18923326 0.143371787 -2.802166942 0.005961802 0.024629058 Down 2.656142 2.625069 2.088295 0.4295276 0.4333366 0 KYP36978.1 "hypothetical protein KK1_041872, partial [Cajanus cajan]" -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410YADE Reverse transcriptase (RNA-dependent DNA polymerase) -- -- -- TRINITY_DN12820_c0_g1_i1 16.07027116 32.14054232 0 0 #NAME? 2.32E-08 2.80E-07 Down 2.490828 2.971809 5.520143 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12824_c0_g1_i1 11.43101852 19.92196356 2.940073475 0.147579503 -2.760435736 0.001356337 0.006835595 Down 2.794497 4.536015 4.771546 1.465849 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12827_c0_g1_i2 49.66132783 24.46544475 74.8572109 3.059711837 1.613395787 1.27E-05 0.000101135 Up 1.131255 1.559053 1.237286 3.522703 3.43643 2.816466 XP_011092949.1 (RS)-norcoclaurine 6-O-methyltransferase-like [Sesamum indicum] Q9T003|ASMT_ARATH Acetylserotonin O-methyltransferase OS=Arabidopsis thaliana OX=3702 GN=ASMT PE=1 SV=1 -- -- -- -- -- -- KOG3178 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS7T o-methyltransferase Cellular Component: cytoplasm (GO:0005737);|Molecular Function: O-methyltransferase activity (GO:0008171);|Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757);|Molecular Function: acetylserotonin O-methyltransferase activity (GO:0017096);|Biological Process: aromatic compound biosynthetic process (GO:0019438);|Biological Process: melatonin biosynthetic process (GO:0030187);|Molecular Function: protein dimerization activity (GO:0046983); "PF00891.17,PF08100.10" O-methyltransferase|Dimerisation domain TRINITY_DN12830_c0_g1_i1 10.69255683 21.38511365 0 0 #NAME? 2.57E-07 2.69E-06 Down 2.304921 1.60458 2.146428 0 0 0 BAG73001.1 "chemokine (C-C motif) ligand 5, partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- O ENOG410ZUYI chemokine (C-C motif) ligand 5 -- PF00048.19 "Small cytokines (intecrine/chemokine), interleukin-8 like" TRINITY_DN12831_c0_g2_i1 24.49846133 13.14836688 35.84855578 2.72646452 1.447031381 0.004460471 0.019224664 Up 3.458981 2.714558 1.113952 4.086052 4.929865 7.06367 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12836_c0_g1_i1 9.831781986 2.699108008 16.96445596 6.285208267 2.651960551 0.004483293 0.019310193 Up 0.2450106 0 0.468195 1.296547 1.538813 0.79891 XP_023920850.1 receptor like protein 30-like [Quercus suber] Q9LVM0|Y5830_ARATH Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana OX=3702 GN=At5g58300 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN12840_c0_g1_i1 12.21859573 18.5419413 5.895250162 0.317941367 -1.653167359 0.034873628 0.106488185 Down 2.263984 0.8836576 1.801854 0.09531885 0.8704889 0.308897 XP_011085762.1 ABC transporter B family member 19 [Sesamum indicum] Q9LJX0|AB19B_ARATH ABC transporter B family member 19 OS=Arabidopsis thaliana OX=3702 GN=ABCB19 PE=1 SV=1 sind:105167663 K05658 ABCB1 "ATP-binding cassette, subfamily B (MDR/TAP), member 1" ko02010 ABC transporters KOG0055 "Multidrug/pheromone exporter, ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1132 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: regulation of cell size (GO:0008361);|Biological Process: response to blue light (GO:0009637);|Biological Process: response to red or far red light (GO:0009639);|Biological Process: photomorphogenesis (GO:0009640);|Biological Process: response to auxin (GO:0009733);|Biological Process: auxin-activated signaling pathway (GO:0009734);|Biological Process: auxin polar transport (GO:0009926);|Biological Process: positive gravitropism (GO:0009958);|Biological Process: response to far red light (GO:0010218);|Molecular Function: auxin efflux transmembrane transporter activity (GO:0010329);|Biological Process: basipetal auxin transport (GO:0010540);|Biological Process: acropetal auxin transport (GO:0010541);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);|Biological Process: root development (GO:0048364);|Biological Process: stamen development (GO:0048443);|Biological Process: lateral root development (GO:0048527);|Biological Process: auxin transport (GO:0060918);|Biological Process: formation of plant organ boundary (GO:0090691);" PF00664.22 ABC transporter transmembrane region TRINITY_DN12840_c0_g3_i1 17.19684338 27.33298097 7.060705784 0.258321834 -1.952758504 0.003542113 0.015748006 Down 1.488744 2.391053 1.16257 0.3854074 0.3289784 0.3762599 PIN24485.1 "Multidrug/pheromone exporter, ABC superfamily [Handroanthus impetiginosus]" Q9LJX0|AB19B_ARATH ABC transporter B family member 19 OS=Arabidopsis thaliana OX=3702 GN=ABCB19 PE=1 SV=1 egu:105056548 K05658 ABCB1 "ATP-binding cassette, subfamily B (MDR/TAP), member 1" ko02010 ABC transporters KOG0055 "Multidrug/pheromone exporter, ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1132 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: regulation of cell size (GO:0008361);|Biological Process: response to blue light (GO:0009637);|Biological Process: response to red or far red light (GO:0009639);|Biological Process: photomorphogenesis (GO:0009640);|Biological Process: response to auxin (GO:0009733);|Biological Process: auxin-activated signaling pathway (GO:0009734);|Biological Process: auxin polar transport (GO:0009926);|Biological Process: positive gravitropism (GO:0009958);|Biological Process: response to far red light (GO:0010218);|Molecular Function: auxin efflux transmembrane transporter activity (GO:0010329);|Biological Process: basipetal auxin transport (GO:0010540);|Biological Process: acropetal auxin transport (GO:0010541);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);|Biological Process: root development (GO:0048364);|Biological Process: stamen development (GO:0048443);|Biological Process: lateral root development (GO:0048527);|Biological Process: auxin transport (GO:0060918);|Biological Process: formation of plant organ boundary (GO:0090691);" "PF00664.22,PF00005.26" ABC transporter transmembrane region|ABC transporter TRINITY_DN12845_c0_g1_i1 10.17330707 16.68488682 3.661727313 0.219463719 -2.187945637 0.021531954 0.071857079 Down 2.30026 1.109889 0.7901678 0.2174037 0.4313481 0.1165293 PIN10824.1 Helicase of the DEAD superfamily [Handroanthus impetiginosus] F4HQE2|RTEL1_ARATH Regulator of telomere elongation helicase 1 homolog OS=Arabidopsis thaliana OX=3702 GN=RTEL1 PE=3 SV=1 sind:105157616 K11136 RTEL1 regulator of telomere elongation helicase 1 -- -- KOG1132 Helicase of the DEAD superfamily [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG1199 helicase "Biological Process: telomere maintenance (GO:0000723);|Biological Process: recombinational repair (GO:0000725);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: ATP-dependent DNA helicase activity (GO:0004003);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: DNA replication (GO:0006260);|Biological Process: DNA repair (GO:0006281);|Biological Process: DNA recombination (GO:0006310);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: pollen development (GO:0009555);|Biological Process: regulation of double-strand break repair via homologous recombination (GO:0010569);|Biological Process: DNA duplex unwinding (GO:0032508);|Biological Process: interstrand cross-link repair (GO:0036297);|Biological Process: maintenance of rDNA (GO:0043007);|Biological Process: negative regulation of DNA recombination (GO:0045910);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: root development (GO:0048364);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);|Molecular Function: DNA polymerase binding (GO:0070182);|Biological Process: mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication (GO:0070716);|Biological Process: telomeric loop disassembly (GO:0090657);|Biological Process: negative regulation of t-circle formation (GO:1904430);" PF06733.14 DEAD_2 TRINITY_DN12850_c0_g2_i1 6.242558153 0.936269028 11.54884728 12.33496669 3.624681915 0.003598331 0.015971352 Up 0 0.4432931 0 1.189347 2.01056 2.226991 XP_012850405.1 PREDICTED: probable protein phosphatase 2C 23 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12852_c0_g1_i2 53.27221345 77.5113886 29.03303831 0.374564807 -1.41671274 7.27E-05 0.000496502 Down 2.576947 3.998513 3.511476 1.396768 0.6585796 1.022833 XP_012857277.1 PREDICTED: zeatin O-xylosyltransferase-like [Erythranthe guttata] P56725|ZOX_PHAVU Zeatin O-xylosyltransferase OS=Phaseolus vulgaris OX=3885 GN=ZOX1 PE=2 SV=1 sind:105162555 K13495 CISZOG cis-zeatin O-glucosyltransferase ko00908 Zeatin biosynthesis KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase "Biological Process: protein glycosylation (GO:0006486);|Biological Process: cytokinin metabolic process (GO:0009690);|Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);|Molecular Function: zeatin O-beta-D-xylosyltransferase activity (GO:0050404);" PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN12856_c0_g1_i1 452.9953417 864.6980513 41.29263221 0.047753817 -4.388240146 1.04E-154 5.02E-152 Down 89.97568 81.24176 83.92768 2.326381 3.758155 3.696989 XP_011069851.1 EG45-like domain containing protein [Sesamum indicum] Q9ZP41|EGC_CITJA EG45-like domain containing protein OS=Citrus jambhiri OX=64884 GN=CjBAp12 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XTMI DPBB_1 Cellular Component: extracellular region (GO:0005576); PF03330.17 Lytic transglycolase TRINITY_DN12866_c0_g1_i1 20.40559906 40.81119812 0 0 #NAME? 2.63E-13 5.34E-12 Down 4.403623 4.087675 3.04834 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12867_c0_g1_i2 5.239598968 9.707621242 0.771576693 0.079481541 -3.65323635 0.011646699 0.043211696 Down 1.304935 1.506083 1.023081 0 0 0.2724501 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12869_c0_g1_i1 18.06470764 36.12941528 0 0 #NAME? 5.93E-12 1.07E-10 Down 3.665085 3.80295 3.91363 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1286_c0_g1_i1 6.660088615 12.58515886 0.735018369 0.058403583 -4.097799313 0.00191473 0.009265041 Down 0.7774873 1.651095 1.424392 0.1631076 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12873_c0_g1_i1 123.8387297 79.94548833 167.7319711 2.098079262 1.069069182 0.006822886 0.027633513 Up 10.17545 8.54784 16.13597 18.95601 25.32954 14.61027 XP_022892192.1 elongation factor 2 [Olea europaea var. sylvestris] Q9ASR1|EF2_ARATH Elongation factor 2 OS=Arabidopsis thaliana OX=3702 GN=LOS1 PE=1 SV=1 -- -- -- -- -- -- KOG0469 Elongation factor 2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0480 "Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)" Molecular Function: mRNA binding (GO:0003729);|Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: copper ion binding (GO:0005507);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translational elongation (GO:0006414);|Biological Process: response to cold (GO:0009409);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: chloroplast (GO:0009507);|Biological Process: cold acclimation (GO:0009631);|Biological Process: response to cytokinin (GO:0009735);|Cellular Component: membrane (GO:0016020);|Cellular Component: apoplast (GO:0048046); PF03764.17 "Elongation factor G, domain IV" TRINITY_DN12882_c0_g1_i2 13.08470881 20.25025503 5.91916259 0.292300644 -1.774475086 0.015525257 0.054928915 Down 1.685398 2.417449 4.136923 1.255923 0.4148983 0.4290133 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12889_c0_g1_i2 24.41407073 48.10367098 0.724470471 0.015060607 -6.053076298 2.41E-07 2.53E-06 Down 7.224071 3.412334 3.43888 0 0.1604331 0 XP_012843622.1 PREDICTED: fasciclin-like arabinogalactan protein 8 [Erythranthe guttata] O22126|FLA8_ARATH Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana OX=3702 GN=FLA8 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- M ENOG410YIMZ Fasciclin-like arabinogalactan protein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: anchored component of membrane (GO:0031225);|Cellular Component: anchored component of plasma membrane (GO:0046658);|Cellular Component: apoplast (GO:0048046); -- -- TRINITY_DN12890_c0_g2_i1 45.33292996 9.701420849 80.96443907 8.345626927 3.061020429 8.01E-13 1.56E-11 Up 0.7172304 1.579787 1.401841 8.435607 8.283988 8.214735 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12894_c0_g1_i1 26.87591783 41.74126676 12.01056891 0.287738486 -1.797169895 0.000539041 0.003017475 Down 6.52143 7.215026 5.327737 1.10955 1.088715 2.255413 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12896_c0_g1_i1 57.63126826 114.538066 0.724470471 0.00632515 -7.304684546 1.55E-33 9.90E-32 Down 9.721674 12.96611 12.03536 1.02E-41 0.1707079 1.64E-40 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12898_c0_g1_i2 27.05727718 38.09548544 16.01906893 0.420497829 -1.249829743 0.014704477 0.052536824 Down 3.046889 2.12804 2.00225 0.9245655 0.6181783 0.9057278 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1289_c0_g1_i1 7.648114976 15.29622995 0 0 #NAME? 1.96E-05 0.000150686 Down 0.7515006 2.442592 2.124833 0 0 0 PIN22815.1 [histone H3]-lysine-36 demethylase [Handroanthus impetiginosus] Q336N8|JM706_ORYSJ Lysine-specific demethylase JMJ706 OS=Oryza sativa subsp. japonica OX=39947 GN=JMJ706 PE=2 SV=1 -- -- -- -- -- -- KOG1246 "DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XR9J lysine (K)-specific demethylase "Cellular Component: heterochromatin (GO:0000792);|Molecular Function: DNA-binding transcription repressor activity, RNA polymerase II-specific (GO:0001227);|Molecular Function: chromatin binding (GO:0003682);|Cellular Component: nucleus (GO:0005634);|Molecular Function: histone demethylase activity (GO:0032452);|Molecular Function: histone demethylase activity (H3-K9 specific) (GO:0032454);|Molecular Function: histone demethylase activity (H3-trimethyl-K4 specific) (GO:0034647);|Molecular Function: methylated histone binding (GO:0035064);|Cellular Component: histone methyltransferase complex (GO:0035097);|Biological Process: positive regulation of gene expression, epigenetic (GO:0045815);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: flower morphogenesis (GO:0048439);|Molecular Function: dioxygenase activity (GO:0051213);" -- -- TRINITY_DN12900_c0_g1_i1 16.54642749 33.09285499 0 0 #NAME? 0.001516548 0.007552458 Down 3.935586 4.617331 0 0 0 0 KRH75874.1 hypothetical protein GLYMA_01G115900 [Glycine max] Q9XF88|CB4B_ARATH "Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.2 PE=1 SV=1" gmx:100785180 K08915 LHCB4 light-harvesting complex II chlorophyll a/b binding protein 4 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- I ENOG410YYUX Chlorophyll A-B binding protein "Biological Process: response to light stimulus (GO:0009416);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: photosystem I (GO:0009522);|Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: thylakoid (GO:0009579);|Biological Process: response to blue light (GO:0009637);|Biological Process: response to cytokinin (GO:0009735);|Biological Process: photosynthesis, light harvesting in photosystem I (GO:0009768);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: response to red light (GO:0010114);|Biological Process: response to far red light (GO:0010218);|Cellular Component: plastoglobule (GO:0010287);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: metal ion binding (GO:0046872);" PF00504.20 Chlorophyll A-B binding protein TRINITY_DN12913_c1_g1_i1 11.53900487 5.410179099 17.66783064 3.265664651 1.707376649 0.041244008 0.121608381 Up 0.3516505 0.6731547 1.363644 1.692646 3.294121 1.228759 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12915_c0_g1_i1 19.02197118 26.95400008 11.08994228 0.411439573 -1.281247534 0.030015106 0.094250891 Down 2.153862 3.566284 4.591765 1.194029 1.376004 0.8582606 XP_011074553.1 protein RADIALIS-like 3 [Sesamum indicum] Q8GW75|RADL5_ARATH Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1 -- -- -- -- -- -- KOG0724 "Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " K COG5269 Transcription factor Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634); -- -- TRINITY_DN12917_c0_g1_i1 284.9735269 562.7425719 7.204481767 0.012802447 -6.28743664 4.26E-141 1.71E-138 Down 39.53672 41.06793 45.74439 0.1884533 0.1873302 0.9342495 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12924_c0_g1_i1 1350.533228 2701.066456 0 0 #NAME? 0 0 Down 93.0964 94.82683 94.98615 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12934_c0_g1_i2 1159.959438 328.7336262 1991.18525 6.057138947 2.598636506 1.70E-156 8.49E-154 Up 25.13612 27.02169 28.41328 136.5613 131.441 125.4328 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF04554.12 Extensin-like region TRINITY_DN12936_c0_g1_i1 13.88014336 27.76028672 0 0 #NAME? 0.002004682 0.009656041 Down 6.175003 5.58483 0 0 0 0 KRH44349.1 hypothetical protein GLYMA_08G204800 [Glycine max] Q9SUI6|PSAH2_ARATH "Photosystem I reaction center subunit VI-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAH2 PE=2 SV=1" gmx:100811201 K02695 psaH photosystem I subunit VI ko00195 Photosynthesis -- -- -- -- -- S ENOG4112D30 Photosystem I reaction center subunit Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: photosystem I reaction center (GO:0009538);|Cellular Component: thylakoid (GO:0009579);|Biological Process: response to cytokinin (GO:0009735);|Cellular Component: plastoglobule (GO:0010287);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021); PF03244.13 Photosystem I reaction centre subunit VI TRINITY_DN12942_c0_g1_i1 19.02879984 38.05759969 0 0 #NAME? 1.56E-12 2.97E-11 Down 6.097504 4.487906 5.325351 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12946_c0_g1_i2 21.73469992 38.69178044 4.777619396 0.123478923 -3.017663284 1.51E-06 1.41E-05 Down 6.143155 4.646533 7.487798 1.873977 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12955_c0_g1_i1 32.58662526 9.635807923 55.5374426 5.763651896 2.526983204 1.12E-07 1.23E-06 Up 3.180167 0.7910179 1.23003 8.029674 6.713961 9.369815 XP_022842068.1 defensin-like protein 1 [Olea europaea var. sylvestris] P82787|DEF19_ARATH Defensin-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=PDF1.4 PE=3 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111DG5 Gamma-thionin family Cellular Component: extracellular region (GO:0005576);|Biological Process: defense response (GO:0006952);|Biological Process: killing of cells of other organism (GO:0031640);|Biological Process: defense response to fungus (GO:0050832); -- -- TRINITY_DN12962_c0_g1_i2 196.4151676 329.6311152 63.19922003 0.191727107 -2.382873772 5.52E-32 3.31E-30 Down 55.93293 43.91096 50.82044 6.459107 8.520461 8.419432 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12976_c0_g1_i1 38.5075108 24.69219922 52.32282237 2.119002115 1.083385028 0.007969572 0.031501461 Up 1.133679 0.9566714 0.8318475 1.702436 1.715314 1.572537 XP_021832117.1 putative disease resistance protein RGA4 isoform X1 [Prunus avium] Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Biological Process: defense response (GO:0006952);|Molecular Function: ADP binding (GO:0043531); PF00931.21 NB-ARC domain TRINITY_DN12978_c0_g1_i2 99.31806962 39.79956046 158.8365788 3.990912888 1.996718789 8.60E-14 1.81E-12 Up 2.54129 3.92584 2.624408 8.855119 11.0098 9.577819 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1297_c0_g1_i1 4.052789608 0 8.105579217 Inf Inf 0.002157981 0.010278829 Up 0 0 0 1.19403 1.495453 0.7217734 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1297_c0_g2_i1 5.707809596 0 11.41561919 Inf Inf 0.00014965 0.000957174 Up 0 0 0 2.384875 2.396022 0.9100548 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12982_c0_g1_i3 16.85607433 28.86950319 4.842645464 0.167742598 -2.57567899 0.000244849 0.001491268 Down 2.603627 2.763027 1.678139 0.1959261 0.384323 0.4164413 XP_021673528.1 uncharacterized protein LOC110659789 [Hevea brasiliensis] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" -- -- TRINITY_DN12982_c0_g2_i1 5.057109123 0.804167767 9.310050479 11.577249 3.533220574 0.014707448 0.052543303 Up 2.89E-98 0.1668293 0.265476 1.021945 1.030335 1.318218 KZV37944.1 hypothetical protein F511_17716 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12982_c0_g3_i1 9.591923213 19.18384643 0 0 #NAME? 1.21E-06 1.14E-05 Down 1.550181 2.634083 2.488786 0 2.53E-78 2.58E-63 KZV32717.1 "hypothetical protein F511_31772, partial [Dorcoceras hygrometricum]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12986_c0_g1_i1 20.86273686 30.18927233 11.53620138 0.382129163 -1.387867729 0.01567868 0.055389704 Down 1.653521 1.684828 1.929313 0.9188422 0.206374 0.5155692 XP_011090870.1 uncharacterized protein LOC105171448 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12993_c0_g1_i2 33.32100626 50.16528862 16.47672391 0.328448702 -1.606260033 0.008223129 0.032365603 Down 2.895376 6.624079 4.756339 1.628246 1.798172 0.3058324 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN12993_c1_g1_i2 122.512948 245.0258961 0 0 #NAME? 2.22E-58 3.01E-56 Down 19.56711 19.20596 14.23037 8.46E-71 4.75E-57 4.96E-21 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1299_c0_g1_i1 6.227509642 12.45501928 0 0 #NAME? 0.002968192 0.01353442 Down 1.66638 4.332003 0.8626143 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13001_c0_g1_i2 11.24006242 22.48012484 0 0 #NAME? 0.000184969 0.001159072 Down 4.537372 0.7249132 4.825927 0.000145198 7.17E-37 6.28E-30 XP_020258516.1 uncharacterized protein LOC109834912 [Asparagus officinalis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13002_c0_g1_i1 17.74686696 34.35464804 1.139085878 0.033156674 -4.914556879 0.000133583 0.000863163 Down 3.057315 0.7402335 2.303539 0.07733051 0 0.08594387 CAN64509.1 hypothetical protein VITISV_041217 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN1300_c0_g1_i1 8.32738013 16.65476026 0 0 #NAME? 0.002350656 0.011061926 Down 6.406927 0.8964274 2.802263 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13012_c0_g1_i2 45.86631213 66.57977252 25.15285174 0.377785186 -1.404361964 0.000246232 0.00149854 Down 7.973887 11.82958 9.793384 3.745812 0.9571777 4.357504 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13016_c0_g1_i1 280.4894683 141.4209362 419.5580004 2.966731883 1.56887455 3.56E-17 9.70E-16 Up 6.200703 9.516827 9.932464 21.14205 22.16651 18.06752 XP_012828618.1 PREDICTED: blue copper protein-like [Erythranthe guttata] O82081|UCC1_ARATH Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YP7M Copper ion binding electron carrier Molecular Function: electron transfer activity (GO:0009055);|Cellular Component: anchored component of membrane (GO:0031225);|Cellular Component: anchored component of plasma membrane (GO:0046658);|Molecular Function: metal ion binding (GO:0046872); PF02298.16 Plastocyanin-like domain TRINITY_DN13019_c0_g2_i1 19.67395913 34.20278967 5.145128581 0.150430086 -2.732834963 2.49E-05 0.000186779 Down 2.535863 2.7771 3.077513 1.007862 1.63E-40 2.52E-33 PON41343.1 "Zinc finger, CCHC-type [Parasponia andersonii]" P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 bvg:104905624 K05658 ABCB1 "ATP-binding cassette, subfamily B (MDR/TAP), member 1" ko02010 ABC transporters KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN13027_c1_g1_i1 32.22741093 48.70413504 15.75068682 0.323395268 -1.628629524 0.000454281 0.00259223 Down 2.736473 4.809477 3.547548 0.5277775 0.8577512 1.484261 PIN04079.1 Ubiquitin--protein ligase [Handroanthus impetiginosus] Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1 -- -- -- -- -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transferase activity (GO:0016740);|Molecular Function: ubiquitin protein ligase binding (GO:0031625);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN13031_c0_g1_i1 134.2494088 182.8789079 85.61990965 0.468178155 -1.094870475 1.30E-06 1.22E-05 Down 6.790289 6.124811 6.258878 2.174258 2.326599 2.719595 XP_011092645.1 "probable carotenoid cleavage dioxygenase 4, chloroplastic [Sesamum indicum]" O49675|CCD4_ARATH "Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCD4 PE=1 SV=1" sind:105172767 K09840 NCED 9-cis-epoxycarotenoid dioxygenase ko00906 Carotenoid biosynthesis KOG1285 "Beta, beta-carotene 15,15'-dioxygenase and related enzymes" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG3670 dioxygenase Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: plastoglobule (GO:0010287);|Molecular Function: carotenoid dioxygenase activity (GO:0010436);|Biological Process: carotene catabolic process (GO:0016121);|Molecular Function: 9-cis-epoxycarotenoid dioxygenase activity (GO:0045549);|Molecular Function: metal ion binding (GO:0046872); PF03055.14 Retinal pigment epithelial membrane protein TRINITY_DN13035_c0_g1_i1 35.94240208 19.49905371 52.38575044 2.686579114 1.425770323 0.001154759 0.005924946 Up 2.035118 1.035655 2.00279 3.982328 3.454699 3.666408 XP_023904039.1 probable calcium-binding protein CML45 [Quercus suber] Q9MBG5|CML45_ARATH Probable calcium-binding protein CML45 OS=Arabidopsis thaliana OX=3702 GN=CML45 PE=2 SV=1 gra:105779195 K02183 CALM calmodulin ko04626|ko04070 Plant-pathogen interaction|Phosphatidylinositol signaling system KOG0027 Calmodulin and related proteins (EF-Hand superfamily) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms DTZ COG5126 Calcium-binding protein Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: nucleus (GO:0005634);|Biological Process: calcium-mediated signaling (GO:0019722);|Molecular Function: enzyme regulator activity (GO:0030234);|Biological Process: spindle pole body organization (GO:0051300); "PF00036.31,PF13405.5,PF13202.5,PF13499.5" EF hand|EF-hand domain|EF hand|EF-hand domain pair TRINITY_DN13037_c0_g2_i1 7.961607432 13.3299141 2.593300769 0.194547448 -2.36180604 0.033003186 0.101891697 Down 3.520729 1.266321 1.166012 0.2015928 0.4022698 0.2104124 CDP07536.1 unnamed protein product [Coffea canephora] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41125BH NA -- -- -- TRINITY_DN13042_c0_g1_i1 26.89217027 53.78434053 0 0 #NAME? 0.000619615 0.003411715 Down 6.418068 7.345983 0 0 0 0 KRH76577.1 hypothetical protein GLYMA_01G161500 [Glycine max] Q38853|STR15_ARATH "Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR15 PE=2 SV=1" -- -- -- -- -- -- KOG1530 Rhodanese-related sulfurtransferase [P] METABOLISM Inorganic ion transport and metabolism P COG0607 Rhodanese domain protein Biological Process: response to oxidative stress (GO:0006979);|Biological Process: aging (GO:0007568);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: thylakoid (GO:0009579);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to jasmonic acid (GO:0009753); PF00581.19 Rhodanese-like domain TRINITY_DN13043_c0_g1_i1 44.82458041 62.12714354 27.52201728 0.442995054 -1.174637505 0.003268838 0.014701514 Down 8.006585 9.125062 6.985128 3.037589 4.339601 1.119302 XP_011072663.1 uncharacterized protein LOC105157864 isoform X2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13049_c0_g1_i2 9.981428461 15.49017796 4.472678964 0.288742904 -1.792142604 0.041245908 0.121608381 Down 1.994749 1.288706 1.503464 0.5659374 0.2203518 0.4074838 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13051_c0_g1_i1 288.5447968 0.312089676 576.7775038 1848.114655 10.85183855 9.18E-184 5.71E-181 Up 0 0.03212591 0 11.55298 11.68815 11.46594 OMO72576.1 "Transposase, Tc1-like protein [Corchorus olitorius]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBST Mariner sub-class -- -- -- TRINITY_DN13052_c0_g1_i1 13.61169397 19.75861464 7.464773293 0.377798415 -1.404311446 0.049885717 0.141475844 Down 3.204578 1.529528 3.126452 0.7514299 0.743287 0.9741399 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13054_c0_g1_i1 26.30343351 52.60686703 0 0 #NAME? 4.12E-17 1.12E-15 Down 11.01069 6.227188 9.608805 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13056_c0_g2_i1 26.05095864 16.30010841 35.80180887 2.196415383 1.135150921 0.02885722 0.09138873 Up 0.5758564 0.9046817 0.8689408 1.440612 1.078975 1.622594 XP_012854110.1 PREDICTED: putative disease resistance protein RGA4 [Erythranthe guttata] Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Biological Process: defense response (GO:0006952);|Molecular Function: ADP binding (GO:0043531); PF12799.6 Leucine Rich repeats (2 copies) TRINITY_DN13059_c0_g1_i1 40.68071436 27.00892821 54.35250051 2.012390128 1.008910018 0.034404056 0.105370981 Up 2.986813 3.518261 2.131558 4.007302 3.178985 6.866618 PIN21432.1 hypothetical protein CDL12_05856 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41115QD NA -- -- -- TRINITY_DN13068_c0_g1_i1 10.55657597 21.11315194 0 0 #NAME? 2.67E-07 2.79E-06 Down 2.182951 2.867629 4.03244 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13068_c0_g2_i2 26.11358396 52.22716792 0 0 #NAME? 5.27E-17 1.41E-15 Down 5.475181 3.72017 5.202881 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1307_c0_g1_i1 3.174003465 6.348006931 0 0 #NAME? 0.013187025 0.048010796 Down 1.368233 0.4417741 2.152762 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13089_c0_g1_i3 105.397038 175.1627721 35.63130383 0.203418246 -2.297479006 3.08E-17 8.42E-16 Down 17.87119 22.82833 16.68622 2.304481 3.880058 3.201629 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13092_c0_g1_i1 23.24850831 46.49701661 0 0 #NAME? 0.00243175 0.01139511 Down 9.410914 5.256547 0 0 0 0 ACU21545.1 unknown [Glycine max] O22611|DRM1_PEA Dormancy-associated protein 1 OS=Pisum sativum OX=3888 GN=DRM1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YV4V Auxin-repressed 12.5 kDa Biological Process: multicellular organism development (GO:0007275); PF05564.11 Dormancy/auxin associated protein TRINITY_DN13098_c0_g1_i1 15.6785659 8.863325518 22.49380627 2.537851761 1.343607802 0.047683105 0.136405292 Up 2.603483 0.9517425 0.2511149 2.333792 1.639083 3.751134 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13100_c0_g1_i1 13.28948869 26.57897739 0 0 #NAME? 3.68E-08 4.32E-07 Down 5.117368 2.924017 7.22755 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13105_c0_g1_i1 18.4382962 25.81266055 11.06393185 0.428624234 -1.222214674 0.049098995 0.139628535 Down 2.733787 6.542577 4.241546 2.264722 1.521169 0.7677444 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13110_c0_g1_i1 25.47066317 50.94132634 0 0 #NAME? 1.39E-16 3.61E-15 Down 8.397053 8.197279 8.63341 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13111_c0_g1_i1 52.71698567 104.7095009 0.724470471 0.006918861 -7.175249749 3.12E-24 1.30E-22 Down 2.837974 2.783841 4.176961 2.78E-79 0.05709177 1.37E-26 XP_021717769.1 uncharacterized protein LOC110685538 [Chenopodium quinoa] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13111_c0_g2_i1 29.61247214 41.50719079 17.7177535 0.426859856 -1.228165603 0.012637564 0.046277586 Down 1.273612 1.703439 1.099452 0.5325451 0.5565841 0.3022365 KMS98576.1 hypothetical protein BVRB_4g092630 [Beta vulgaris subsp. vulgaris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03078.14 ATHILA ORF-1 family TRINITY_DN13123_c0_g1_i1 14.86931765 29.73863531 0 0 #NAME? 0.000269081 0.001623514 Down 10.15689 2.495445 3.951594 0 0 0 EXC28856.1 (R)-mandelonitrile lyase-like protein [Morus notabilis] Q9SSM2|MDLL_ARATH (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana OX=3702 GN=At1g73050 PE=2 SV=1 pmum:103328816 K08248 E4.1.2.10 (R)-mandelonitrile lyase ko00460 Cyanoamino acid metabolism KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) [R] POORLY CHARACTERIZED General function prediction only E COG2303 oxidoreductase "Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614);|Molecular Function: mandelonitrile lyase activity (GO:0046593);|Molecular Function: flavin adenine dinucleotide binding (GO:0050660);" -- -- TRINITY_DN13128_c0_g1_i1 8.609667534 17.21933507 0 0 #NAME? 0.000286998 0.001720054 Down 1.021309 3.853716 5.51953 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13128_c0_g2_i2 12.90576973 25.81153945 0 0 #NAME? 1.26E-08 1.57E-07 Down 3.217616 5.259892 2.59826 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13129_c0_g1_i1 18.65205574 30.95487095 6.349240526 0.205112809 -2.285510507 0.000399216 0.002312835 Down 6.150283 3.085045 4.406464 0.5962692 0.5955858 0.9488954 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13132_c0_g1_i1 24.11702571 34.61373644 13.62031498 0.393494502 -1.345584617 0.011906679 0.044045299 Down 1.398993 2.169944 2.12915 0.4849656 0.9545199 0.3894466 XP_011031878.1 PREDICTED: probable pectinesterase 68 [Populus euphratica] Q8LPF3|PME68_ARATH Probable pectinesterase 68 OS=Arabidopsis thaliana OX=3702 GN=PME68 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- G COG4677 pectinesterase Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: pectinesterase activity (GO:0030599);|Biological Process: cell wall modification (GO:0042545);|Molecular Function: aspartyl esterase activity (GO:0045330);|Biological Process: pectin catabolic process (GO:0045490); PF01095.18 Pectinesterase TRINITY_DN13134_c0_g1_i1 10.58517208 16.31715079 4.853193362 0.297428971 -1.749382917 0.044226558 0.128493096 Down 3.45382 4.184557 1.66379 0.9077558 0.4511339 0.9308576 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13135_c0_g1_i1 33.56937063 52.29321855 14.84552272 0.283890017 -1.816595975 8.48E-05 0.00057065 Down 2.345577 1.630544 2.174663 0.1778979 0.7087139 0.5193659 CAN74303.1 hypothetical protein VITISV_032980 [Vitis vinifera] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZXEB Integrase core domain Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); "PF00665.25,PF13976.5" Integrase core domain|GAG-pre-integrase domain TRINITY_DN13139_c0_g2_i4 18.40634596 27.88842979 8.924262133 0.319998731 -1.643861913 0.036265509 0.109813512 Down 3.818153 6.43053 1.905703 1.029151 1.039576 1.081685 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13139_c0_g4_i1 29.57783546 59.15567093 0 0 #NAME? 3.34E-19 1.04E-17 Down 4.344758 4.776364 5.277833 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13141_c0_g1_i1 5.689243459 11.37848692 0 0 #NAME? 0.001253189 0.006376643 Down 0.5955293 1.546067 3.007342 0 0 0 XP_011099111.1 floral homeotic protein APETALA 2 isoform X2 [Sesamum indicum] -- -- sind:105177600 K09284 AP2 "AP2-like factor, euAP2 lineage" -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13141_c0_g2_i1 3.900358959 7.800717919 0 0 #NAME? 0.005434117 0.022759814 Down 1.875725 1.305462 0.807527 0 0 0 XP_012079272.1 floral homeotic protein APETALA 2 isoform X1 [Jatropha curcas] P47927|AP2_ARATH Floral homeotic protein APETALA 2 OS=Arabidopsis thaliana OX=3702 GN=AP2 PE=1 SV=1 jcu:105639741 K09284 AP2 "AP2-like factor, euAP2 lineage" -- -- -- -- -- -- -- K ENOG410YBZ8 floral homeotic protein APETALA Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: flower development (GO:0009908);|Biological Process: meristem maintenance (GO:0010073);|Biological Process: specification of floral organ identity (GO:0010093);|Biological Process: cell differentiation (GO:0030154);|Biological Process: seed development (GO:0048316);|Biological Process: plant ovule development (GO:0048481); PF00847.19 AP2 domain TRINITY_DN13142_c0_g1_i1 27.65742943 1.881418354 53.43344051 28.40061616 4.827850325 1.06E-13 2.22E-12 Up 0.2094736 0 0.4804603 7.309857 5.549074 5.597509 PIN25307.1 Fe2+/Zn2+ regulated transporter [Handroanthus impetiginosus] Q94DG6|ZIP1_ORYSJ Zinc transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ZIP1 PE=1 SV=1 sind:105170429 K14709 "SLC39A1_2_3, ZIP1_2_3" "solute carrier family 39 (zinc transporter), member 1/2/3" -- -- KOG1558 Fe2+/Zn2+ regulated transporter [P] METABOLISM Inorganic ion transport and metabolism P ENOG4111GP2 zinc transporter Molecular Function: zinc ion transmembrane transporter activity (GO:0005385);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: zinc ion transport (GO:0006829);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: zinc ion transmembrane transport (GO:0071577); PF02535.21 ZIP Zinc transporter TRINITY_DN13145_c0_g1_i2 27.23526495 17.6790444 36.7914855 2.081078857 1.057331633 0.036905987 0.111291666 Up 2.393141 0.9088611 2.354369 2.772168 3.521568 3.434673 PIN06045.1 hypothetical protein CDL12_21415 [Handroanthus impetiginosus] Q9FN29|ATB52_ARATH Homeobox-leucine zipper protein ATHB-52 OS=Arabidopsis thaliana OX=3702 GN=ATHB-52 PE=2 SV=1 -- -- -- -- -- -- KOG0483 "Transcription factor HEX, contains HOX and HALZ domains" [K] INFORMATION STORAGE AND PROCESSING Transcription K ENOG410Z2UE homeobox-leucine zipper protein Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to blue light (GO:0009637);|Biological Process: response to absence of light (GO:0009646);|Molecular Function: sequence-specific DNA binding (GO:0043565); PF00046.28 Homeobox domain TRINITY_DN13147_c0_g1_i1 14.24524549 24.79993661 3.690554373 0.148813057 -2.748426983 0.000349773 0.002055576 Down 1.375757 1.323593 1.470067 0.1860628 0.1850729 0.09970838 KYP73871.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13147_c0_g2_i1 24.75204946 49.50409892 0 0 #NAME? 4.26E-16 1.07E-14 Down 5.594685 6.052612 5.374222 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13147_c0_g4_i1 11.36172458 22.72344915 0 0 #NAME? 1.03E-07 1.13E-06 Down 1.6019 3.060126 2.022452 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13147_c0_g5_i1 28.3196768 56.6393536 0 0 #NAME? 2.03E-13 4.16E-12 Down 3.409372 4.284723 1.998818 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13166_c0_g1_i2 420.7327247 817.8743895 23.59105988 0.028844356 -5.115567148 7.65E-170 4.18E-167 Down 27.58459 27.3593 26.97292 0.6186262 0.420369 0.8770938 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13166_c0_g2_i1 47.84504912 0 95.69009823 Inf Inf 1.51E-33 9.64E-32 Up 2.87E-46 1.42E-24 5.07E-22 3.080989 2.97344 2.658564 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13168_c0_g1_i2 14.64008472 29.28016944 0 0 #NAME? 0.001849542 0.008985046 Down 3.820206 4.444721 0 0 0 0 KRH48777.1 hypothetical protein GLYMA_07G112000 [Glycine max] P12301|PSBQ_SPIOL "Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSBQ PE=1 SV=1" gmx:100306034 K08901 psbQ photosystem II oxygen-evolving enhancer protein 3 ko00195 Photosynthesis -- -- -- -- -- S ENOG4111SJA oxygen-evolving enhancer protein Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: photosystem II oxygen evolving complex (GO:0009654);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: extrinsic component of membrane (GO:0019898); PF05757.10 Oxygen evolving enhancer protein 3 (PsbQ) TRINITY_DN13173_c0_g1_i1 85.55048845 21.74016838 149.3608085 6.870269169 2.780366623 6.77E-21 2.35E-19 Up 5.99355 2.702746 1.057645 17.0661 18.55704 18.44288 PQP94916.1 hypothetical protein Pyn_25711 [Prunus yedoensis var. nudiflora] P83241|IP23_CAPAN Proteinase inhibitor PSI-1.2 OS=Capsicum annuum OX=4072 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867); -- -- TRINITY_DN13173_c0_g2_i2 142.1824158 38.69573863 245.669093 6.348737657 2.666469764 1.23E-22 4.70E-21 Up 11.12593 5.077525 6.463052 34.15301 35.72262 46.49061 ONI35750.1 hypothetical protein PRUPE_1G552700 [Prunus persica] P83241|IP23_CAPAN Proteinase inhibitor PSI-1.2 OS=Capsicum annuum OX=4072 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z7Y9 Potato type II proteinase inhibitor family Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867); -- -- TRINITY_DN13174_c0_g1_i3 37.56516655 13.15680947 61.97352362 4.710376308 2.23584232 1.47E-05 0.000115549 Up 0.5688444 0.9917055 0.9473125 3.815704 1.955453 3.768367 XP_012847829.1 PREDICTED: uncharacterized protein LOC105967762 [Erythranthe guttata] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN13174_c0_g2_i1 15.1746259 4.418701422 25.93055037 5.868364456 2.552958473 0.000330596 0.001955531 Up 0.4696847 0.460183 0.361056 1.979502 2.165356 1.643041 XP_024178359.1 uncharacterized protein LOC112184333 [Rosa chinensis] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN13175_c1_g1_i1 594.7438892 842.1139194 347.373859 0.412502217 -1.277526221 7.88E-13 1.54E-11 Down 146.9758 145.9137 119.8931 40.94898 37.62988 59.22872 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13175_c1_g2_i1 323.4760331 462.9826108 183.9694554 0.39735716 -1.331491754 8.26E-10 1.18E-08 Down 84.68146 78.27692 62.22685 24.76319 18.34898 29.24326 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13183_c0_g1_i1 28.22323149 53.11286988 3.333593086 0.062764319 -3.993911568 4.48E-11 7.43E-10 Down 3.123875 2.57111 2.371128 0.2408051 0.09635048 0.106516 XP_012839046.1 PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Erythranthe guttata] Q9SLN8|DBR_TOBAC 2-alkenal reductase (NADP(+)-dependent) OS=Nicotiana tabacum OX=4097 GN=DBR PE=1 SV=1 -- -- -- -- -- -- KOG1196 Predicted NAD-dependent oxidoreductase [R] POORLY CHARACTERIZED General function prediction only S COG2130 alcohol dehydrogenase Molecular Function: oxidoreductase activity (GO:0016491); "PF16884.4,PF00107.25,PF13602.5" N-terminal domain of oxidoreductase|Zinc-binding dehydrogenase|Zinc-binding dehydrogenase TRINITY_DN13184_c0_g1_i1 30.89257718 61.05540995 0.72974442 0.011952166 -6.38658405 1.29E-11 2.26E-10 Down 4.308406 3.309674 2.003168 0.0434818 0.04386106 0 ATG80694.1 omega-3 fatty acid desaturase [Perilla frutescens] P48625|FAD3E_SOYBN "Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max OX=3847 GN=FAD3 PE=2 SV=1" sind:105163949 K10257 "FAD3, FAD7, FAD8, desB" acyl-lipid omega-3 desaturase -- -- -- -- -- -- -- I COG3239 linoleoyl-CoA desaturase activity "Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water (GO:0016717);" -- -- TRINITY_DN13188_c0_g2_i2 6.250182795 11.34300055 1.15736504 0.102033411 -3.292886449 0.008655405 0.033789539 Down 1.756724 1.718817 1.628202 0 0 0.3819935 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13189_c0_g1_i1 28.05618687 38.7150232 17.39735053 0.449369498 -1.154025894 0.021554469 0.071916357 Down 5.382944 3.364896 3.798349 1.616456 1.725619 1.262233 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13191_c0_g1_i1 80.19657929 149.4562902 10.93686841 0.073177706 -3.772452006 3.65E-27 1.80E-25 Down 16.48043 20.74007 15.61338 0.6539072 0.6374964 1.904975 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13199_c0_g1_i1 6.287377291 12.57475458 0 0 #NAME? 0.000148835 0.000952764 Down 3.605542 1.197278 3.311831 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13201_c0_g1_i1 4.41514837 8.058720047 0.771576693 0.095744323 -3.384669246 0.031171657 0.097262512 Down 1.208499 2.374877 0.9229381 0 0 0.3442975 KZV29207.1 Lateral root primordium protein-related [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDRX Domain of unknown function (DUF702) -- -- -- TRINITY_DN13206_c0_g1_i3 8.123133369 13.2306193 3.01564744 0.227929424 -2.133340915 0.032702033 0.101189053 Down 1.609837 0.9505672 1.09977 0 0.273719 0.4517355 CAN79884.1 hypothetical protein VITISV_002539 [Vitis vinifera] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN13215_c0_g1_i1 80.35708769 115.9738918 44.74028352 0.385778927 -1.374153757 4.18E-06 3.62E-05 Down 14.37023 15.76794 11.42132 4.514017 5.059192 3.239636 PIN09585.1 hypothetical protein CDL12_17834 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111P8X Methyltransferase -- -- -- TRINITY_DN13221_c0_g1_i1 32.3637114 20.56010251 44.1673203 2.148205257 1.103131847 0.013593185 0.049256441 Up 2.950945 1.853593 2.067672 3.582658 4.439658 3.884396 XP_011089296.1 uncharacterized protein LOC105170296 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YVXT Pfam:DUF584 -- PF04520.12 Senescence regulator TRINITY_DN13226_c0_g1_i1 34.08074562 55.91700056 12.24449069 0.218976171 -2.191154209 9.36E-06 7.61E-05 Down 4.635187 7.572612 4.405628 0.5401522 1.336967 1.039385 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13227_c0_g1_i1 30.74019636 19.10315281 42.37723992 2.218337483 1.149478864 0.012541597 0.045970665 Up 0.9575491 1.035351 0.7694265 1.69968 1.559128 1.686177 XP_020554265.1 berberine bridge enzyme-like 18 [Sesamum indicum] Q9SA85|BBE8_ARATH Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana OX=3702 GN=At1g30700 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: FAD binding (GO:0071949); "PF01565.22,PF08031.11" FAD binding domain|Berberine and berberine like TRINITY_DN13228_c0_g1_i2 61.63527038 30.85710013 92.41344063 2.994884167 1.582500205 1.90E-06 1.74E-05 Up 2.527855 3.865439 2.845876 6.355371 8.557815 7.364967 XP_022897580.1 "uncharacterized protein LOC111411264, partial [Olea europaea var. sylvestris]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41113TD C1-like domain -- PF03107.15 C1 domain TRINITY_DN13230_c0_g1_i3 19.54670291 35.41058272 3.682823108 0.10400346 -3.265296576 1.58E-06 1.47E-05 Down 2.844642 4.004093 3.720229 0.606846 0.2011834 0.111921 KYP45094.1 Uncharacterized protein At4g06744 family [Cajanus cajan] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YFAF NA -- -- -- TRINITY_DN13231_c0_g1_i1 12.63339208 5.854370035 19.41241413 3.315884376 1.729393701 0.027049807 0.086695748 Up 0.2738952 1.079134 1.07665 1.292273 2.19595 2.793933 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13232_c0_g1_i1 4.481651856 8.963303712 0 0 #NAME? 0.002145834 0.010225263 Down 1.151742 2.192957 1.608206 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13233_c0_g1_i1 23.3425874 32.01591974 14.66925506 0.458186277 -1.125993846 0.039854691 0.118289785 Down 8.598655 4.750248 4.941319 1.459625 1.470777 3.701525 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13235_c0_g1_i1 22.23443097 32.91474072 11.55412123 0.351031817 -1.510326296 0.029731855 0.093535108 Down 5.512267 2.080457 2.922685 0.7927714 1.000653 1.241137 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13237_c0_g1_i2 54.29889103 22.36799155 86.22979052 3.855052892 1.946750654 1.73E-06 1.59E-05 Up 0.9274465 2.708651 8.197531 13.18122 11.08645 12.19145 PIN02139.1 hypothetical protein CDL12_25352 [Handroanthus impetiginosus] Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1 bdi:100827302 K11982 RNF115_126 E3 ubiquitin-protein ligase RNF115/126 -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: ubiquitin protein ligase activity (GO:0061630); -- -- TRINITY_DN13238_c0_g1_i1 23.0977876 13.58483344 32.61074176 2.400525697 1.26335038 0.017338961 0.060095246 Up 1.967893 0.1819716 0.9790411 2.140295 2.136337 1.737767 PIN06523.1 hypothetical protein CDL12_20924 [Handroanthus impetiginosus] Q9M9A5|PCR6_ARATH Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=PCR6 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XUTP Protein PLANT CADMIUM RESISTANCE Cellular Component: integral component of membrane (GO:0016021); PF04749.16 PLAC8 family TRINITY_DN1323_c0_g1_i1 4.048863452 8.097726904 0 0 #NAME? 0.004567699 0.019630901 Down 1.10871 3.190884 0.8704734 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13272_c0_g2_i1 12.77534235 21.03089951 4.519785186 0.214911644 -2.218184445 0.004217613 0.018324091 Down 2.885259 4.211393 3.715661 0.9707131 0 0.955712 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13274_c2_g1_i1 12.69459709 5.794519798 19.59467437 3.381587268 1.757700586 0.019448955 0.066264836 Up 0.72987 0.7131141 0.7013741 2.722231 1.687189 1.269021 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13276_c0_g1_i1 31.75896928 17.3851182 46.13282036 2.653581059 1.407940619 0.002382719 0.011193082 Up 2.780084 1.34764 2.250584 3.755247 5.002622 5.199611 PIM99373.1 hypothetical protein CDL12_28132 [Handroanthus impetiginosus] Q00451|PRF1_SOLLC 36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKTH AAI -- PF14547.5 Hydrophobic seed protein TRINITY_DN13277_c0_g1_i1 11.10609797 19.9811304 2.231065533 0.111658624 -3.162833408 0.000583165 0.003237723 Down 5.587259 3.399458 2.824762 0.3305929 0.3373881 0.343128 PIN16491.1 hypothetical protein CDL12_10857 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13280_c0_g1_i1 45.66788098 16.80458729 74.53117468 4.435168408 2.148988886 4.94E-08 5.68E-07 Up 0.9366638 0.8091905 0.6660836 2.626037 3.263724 2.668068 XP_011094506.1 probable cysteine protease RD19D [Sesamum indicum] Q8VYS0|RD19D_ARATH Probable cysteine protease RD19D OS=Arabidopsis thaliana OX=3702 GN=RD19D PE=2 SV=1 -- -- -- -- -- -- KOG1542 Cysteine proteinase Cathepsin F [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG4870 cathepsin Molecular Function: cysteine-type endopeptidase activity (GO:0004197);|Cellular Component: extracellular space (GO:0005615);|Cellular Component: lysosome (GO:0005764);|Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603); "PF00112.22,PF08246.11" Papain family cysteine protease|Cathepsin propeptide inhibitor domain (I29) TRINITY_DN13282_c0_g1_i1 34.47513084 18.75937777 50.19088391 2.675508992 1.419813378 0.00145016 0.007255278 Up 2.492535 2.412525 2.681136 4.67012 5.862368 5.942564 XP_009777438.1 PREDICTED: uncharacterized protein LOC104227008 [Nicotiana sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZD95 DUF584 domain containing protein -- PF04520.12 Senescence regulator TRINITY_DN13288_c0_g1_i2 28.47285754 38.56360254 18.38211253 0.476670003 -1.068937257 0.036106064 0.109453892 Down 6.255206 7.059207 4.405539 2.650286 3.11349 0.9780179 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13297_c0_g1_i2 8.219984436 16.43996887 0 0 #NAME? 1.00E-05 8.12E-05 Down 2.192195 1.494099 1.58106 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13299_c0_g1_i1 14.32099896 21.21132563 7.430672284 0.350316261 -1.513270139 0.035786391 0.108704673 Down 2.233809 1.373854 1.422383 0.256598 0.5921693 0.5423029 GAU30828.1 hypothetical protein TSUD_267480 [Trifolium subterraneum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13300_c0_g1_i1 46.02185573 66.63289616 25.4108153 0.381355408 -1.390791936 0.04658182 0.133904665 Down 14.89244 12.54398 5.422649 1.798484 5.92786 2.303124 XP_012834275.1 PREDICTED: putative leucine-rich repeat-containing protein DDB_G0290503 isoform X1 [Erythranthe guttata] -- -- sind:105159034 K20478 GOLGB1 golgin subfamily B member 1 -- -- -- -- -- -- -- S ENOG4111UGN "keratin, type II cytoskeletal" -- -- -- TRINITY_DN13303_c0_g1_i1 11.49666373 18.15068199 4.842645464 0.266802397 -1.906156466 0.022859608 0.075522091 Down 2.396946 2.859386 1.133026 0.3306301 0.4923341 0.5228605 XP_021648284.1 uncharacterized protein LOC110641005 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF13963.5 Transposase-associated domain TRINITY_DN13304_c0_g1_i1 100.9707918 201.9415835 0 0 #NAME? 1.74E-38 1.32E-36 Down 13.86495 19.05183 21.37005 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13316_c0_g1_i1 15.08791799 22.38011182 7.795724152 0.348332672 -1.521462297 0.030074342 0.09439014 Down 3.128089 2.440926 2.177526 0.9481154 0.6243723 0.6158551 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13327_c0_g1_i1 4.15914049 8.31828098 0 0 #NAME? 0.003661836 0.016221502 Down 1.540855 2.204367 1.147315 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13327_c0_g2_i2 7.167789545 11.75282622 2.582752871 0.219755897 -2.186026214 0.047976791 0.137020918 Down 1.88222 2.420484 0.9760607 0 0.6414656 0.2216994 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13332_c0_g1_i1 185.6463525 371.292705 0 0 #NAME? 6.09E-112 1.82E-109 Down 16.02314 17.71808 15.54486 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13339_c0_g2_i1 70.8257485 41.29819692 100.3533001 2.429968075 1.28093736 3.48E-05 0.000254372 Up 1.170733 1.46688 1.386367 2.462087 2.677602 2.724991 ANQ46328.1 atpB (chloroplast) [Pogostemon cablin] Q9MU41|ATPB_MAGTR "ATP synthase subunit beta, chloroplastic OS=Magnolia tripetala OX=44926 GN=atpB PE=3 SV=1" sind:11452418 K02112 "ATPF1B, atpD" F-type H+-transporting ATPase subunit beta ko00190|ko00195 Oxidative phosphorylation|Photosynthesis KOG1350 "F0F1-type ATP synthase, beta subunit" [C] METABOLISM Energy production and conversion C COG0055 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (By similarity) "Molecular Function: ATP binding (GO:0005524);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: ATP synthesis coupled proton transport (GO:0015986);|Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261);|Molecular Function: proton-transporting ATP synthase activity, rotational mechanism (GO:0046933);" "PF00006.24,PF02874.22,PF02823.15,PF00401.19" "ATP synthase alpha/beta family, nucleotide-binding domain|ATP synthase alpha/beta family, beta-barrel domain|ATP synthase, Delta/Epsilon chain, beta-sandwich domain|ATP synthase, Delta/Epsilon chain, long alpha-helix domain" TRINITY_DN13341_c0_g1_i1 17.70360433 25.82422075 9.582987902 0.371085269 -1.430177364 0.042571382 0.124705907 Down 2.13275 3.737627 4.752897 0 2.276042 0.9011528 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13344_c0_g1_i4 20.21676674 4.500953845 35.93257964 7.983325509 2.996989836 5.92E-06 4.99E-05 Up 0.6650485 0 1.512018 4.28646 3.007036 6.182131 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13346_c0_g1_i1 8.488719545 3.288922092 13.688517 4.162007069 2.057279416 0.02742021 0.087660087 Up 0.2540329 0.3043094 0.1425107 0.8632512 0.8654404 0.5930887 XP_020550097.1 short-chain dehydrogenase reductase ATA1 [Sesamum indicum] Q9M1K9|ATA1_ARATH Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis thaliana OX=3702 GN=TA1 PE=2 SV=1 -- -- -- -- -- -- KOG0725 Reductases with broad range of substrate specificities [R] POORLY CHARACTERIZED General function prediction only S COG1028 Dehydrogenase reductase Molecular Function: oxidoreductase activity (GO:0016491); "PF13561.5,PF00106.24,PF08659.9" Enoyl-(Acyl carrier protein) reductase|short chain dehydrogenase|KR domain TRINITY_DN13353_c0_g2_i1 7.301247843 14.24026045 0.362235236 0.025437402 -5.296904835 0.000242778 0.001479055 Down 1.843736 1.810359 1.774493 0 0.120938 0 PIN18174.1 hypothetical protein CDL12_09159 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZQDJ Domain of unknown function (DUF2828) -- -- -- TRINITY_DN13354_c0_g1_i1 21.63163581 6.831204724 36.4320669 5.333183292 2.414996912 5.18E-05 0.000365909 Up 0.4665624 0.6815695 0.7203083 2.775377 2.530227 2.801198 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13355_c0_g1_i1 8.003870509 16.00774102 0 0 #NAME? 1.32E-05 0.00010457 Down 2.894182 2.828513 2.666277 2.16E-73 2.16E-39 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13365_c0_g1_i1 14.65776546 7.521434706 21.79409622 2.897598273 1.534857591 0.026313455 0.084688503 Up 0.5095725 1.222537 0.8591892 2.23242 2.401695 1.444989 XP_011082170.1 ethylene-responsive transcription factor ERF003-like [Sesamum indicum] Q94AW5|ERF03_ARATH Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG4111RRZ Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873); PF00847.19 AP2 domain TRINITY_DN13367_c0_g1_i1 18.24955815 31.61182194 4.887294371 0.154603375 -2.693356278 0.000603112 0.003332975 Down 2.790301 6.441585 3.555863 0.7696797 0 0.7237904 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13375_c0_g1_i2 22.33679576 44.31135629 0.362235236 0.008174772 -6.934605788 2.71E-13 5.49E-12 Down 2.04629 2.805556 1.892741 0 0.03578599 0 BAG10958.1 "actin, cytoplasmic 1, partial [synthetic construct]" P43239|ACT1_PNECA Actin-1 OS=Pneumocystis carinii OX=4754 PE=2 SV=1 mlr:MELLADRAFT_45600 K05692 ACTB_G1 actin beta/gamma 1 ko04145 Phagosome KOG0676 Actin and related proteins [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5277 Actin-related protein Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytoskeleton (GO:0005856); PF00022.18 Actin TRINITY_DN13376_c0_g1_i1 17.79421472 25.60874597 9.979683463 0.389698249 -1.359570646 0.032392746 0.100437425 Down 1.998867 2.564627 2.090614 0.8774676 0.7788754 0.4673826 XP_011069952.1 myb-related protein 306 [Sesamum indicum] Q9SN78|MYB94_ARATH Transcription factor MYB94 OS=Arabidopsis thaliana OX=3702 GN=MYB94 PE=1 SV=1 sind:105155728 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to ethylene (GO:0009723);|Biological Process: response to auxin (GO:0009733);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: response to jasmonic acid (GO:0009753);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: response to cadmium ion (GO:0046686);|Biological Process: response to karrikin (GO:0080167);|Biological Process: positive regulation of wax biosynthetic process (GO:1904278);" "PF00249.30,PF13921.5" Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN13377_c0_g1_i1 45.41064298 23.20668177 67.61460419 2.913583461 1.542794638 6.89E-05 0.000473019 Up 3.713424 1.811366 2.962869 6.655969 6.734099 6.77512 XP_011101499.1 vacuolar iron transporter homolog 2-like [Sesamum indicum] Q9M2C3|VITH3_ARATH Vacuolar iron transporter homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At3g43630 PE=3 SV=1 -- -- -- -- -- -- KOG4473 Uncharacterized membrane protein [S] POORLY CHARACTERIZED Function unknown S COG1814 integral membrane protein Molecular Function: iron ion transmembrane transporter activity (GO:0005381);|Molecular Function: manganese ion transmembrane transporter activity (GO:0005384);|Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: intracellular sequestering of iron ion (GO:0006880);|Biological Process: response to iron ion (GO:0010039);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: cellular manganese ion homeostasis (GO:0030026); PF01988.18 VIT family TRINITY_DN13388_c0_g1_i1 8.415596681 16.83119336 0 0 #NAME? 6.60E-06 5.51E-05 Down 1.275284 2.770809 2.43069 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13388_c0_g2_i1 13.91093256 27.43607678 0.385788347 0.014061352 -6.152120822 2.83E-08 3.38E-07 Down 2.288507 3.443325 2.912248 4.55E-44 1.53E-44 0.1126362 AWN64518.1 D14 [Orobanche minor] Q10QA5|D14_ORYSJ Strigolactone esterase D14 OS=Oryza sativa subsp. japonica OX=39947 GN=D14 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG0596 Alpha beta hydrolase Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: secondary shoot formation (GO:0010223);|Molecular Function: hydrolase activity (GO:0016787);|Biological Process: strigolactone biosynthetic process (GO:1901601); -- -- TRINITY_DN13389_c0_g3_i1 8.960880345 15.3491964 2.57256429 0.167602539 -2.576884089 0.009103417 0.035246622 Down 2.794481 2.560469 1.958529 0.9373564 0 0.000699863 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13393_c0_g1_i1 33.81390554 46.65360507 20.974206 0.449573103 -1.15337237 0.010322591 0.03907709 Down 4.57143 4.014744 3.581426 1.444053 0.8923333 2.084428 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13400_c0_g1_i1 17.56860063 28.97920226 6.157999004 0.212497188 -2.234484342 0.017450075 0.060411171 Down 5.966834 8.706018 3.180152 0 3.131122 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13405_c0_g1_i1 14.94439156 23.87295076 6.015832351 0.251993665 -1.988540631 0.005300933 0.022271867 Down 3.366697 4.463246 2.78607 0.7694463 0.260886 1.075325 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13408_c0_g1_i1 495.3646532 208.5154507 782.2138558 3.751347218 1.907408803 3.39E-49 3.60E-47 Up 10.91924 7.823421 10.61523 29.16905 31.54511 28.15997 XP_012836654.1 PREDICTED: basic 7S globulin-like [Erythranthe guttata] P13917|7SB1_SOYBN Basic 7S globulin OS=Glycine max OX=3847 GN=BG PE=1 SV=2 -- -- -- -- -- -- KOG1339 Aspartyl protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XNV7 aspartic Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Biological Process: proteolysis (GO:0006508);|Biological Process: protein catabolic process (GO:0030163);|Molecular Function: identical protein binding (GO:0042802);|Molecular Function: nutrient reservoir activity (GO:0045735); "PF14541.5,PF14543.5" Xylanase inhibitor C-terminal|Xylanase inhibitor N-terminal TRINITY_DN13408_c0_g2_i1 311.5922711 108.7995607 514.3849815 4.72782223 2.24117579 1.03E-44 9.56E-43 Up 3.497857 6.536514 4.219504 16.95725 19.15459 18.21924 PIN06395.1 Aspartyl protease [Handroanthus impetiginosus] P13917|7SB1_SOYBN Basic 7S globulin OS=Glycine max OX=3847 GN=BG PE=1 SV=2 -- -- -- -- -- -- KOG1339 Aspartyl protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XNV7 aspartic Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Biological Process: proteolysis (GO:0006508);|Biological Process: protein catabolic process (GO:0030163);|Molecular Function: identical protein binding (GO:0042802);|Molecular Function: nutrient reservoir activity (GO:0045735); "PF14541.5,PF14543.5" Xylanase inhibitor C-terminal|Xylanase inhibitor N-terminal TRINITY_DN13418_c0_g1_i4 71.54603339 123.0831363 20.00893046 0.162564353 -2.620917153 4.54E-15 1.06E-13 Down 4.36692 3.897032 4.450357 0.5546248 0.6290343 0.4894473 XP_011088500.1 extensin-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF01190.16 Pollen proteins Ole e I like TRINITY_DN13419_c0_g1_i1 135.1893408 18.89147903 251.4872026 13.31220293 3.734677426 1.19E-23 4.86E-22 Up 2.260094 2.43523 2.252707 21.36562 22.81496 31.49324 XP_012833040.1 PREDICTED: non-specific lipid-transfer protein 1-like [Erythranthe guttata] O24038|NLTP2_SOLPN Non-specific lipid-transfer protein 2 OS=Solanum pennellii OX=28526 GN=LTP2 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG410YWBC Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity) Biological Process: lipid transport (GO:0006869);|Molecular Function: lipid binding (GO:0008289); PF00234.21 Protease inhibitor/seed storage/LTP family TRINITY_DN13421_c0_g1_i2 6.661794461 12.59911845 0.724470471 0.057501679 -4.120252095 0.002251867 0.010651139 Down 3.276306 1.445244 1.380856 0 0.2637929 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13422_c0_g1_i5 15.58019429 22.24913166 8.911256919 0.40052156 -1.32004819 0.047052762 0.135001962 Down 2.197839 2.101254 2.845397 0.9436162 0.6339272 0.6907511 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13426_c0_g1_i1 43.03978758 22.04674106 64.0328341 2.904412672 1.538246452 0.000104631 0.000690938 Up 3.481051 5.442101 4.322728 11.94334 11.08571 8.292819 KZV58761.1 hypothetical protein F511_13890 [Dorcoceras hygrometricum] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN13428_c0_g1_i3 48.49537755 72.21511246 24.77564265 0.343081134 -1.543378302 0.011209336 0.041839198 Down 6.23476 16.17984 10.08825 2.610902 3.977654 2.374117 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13429_c0_g1_i1 16.57156799 27.48708154 5.656054431 0.20577137 -2.280885827 0.00073638 0.003978575 Down 2.943506 1.831309 3.092573 0.164093 0.325943 0.8414455 XP_024020247.1 uncharacterized protein LOC112091288 [Morus notabilis] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN13431_c1_g1_i1 7.502642127 2.849372745 12.15591151 4.266171048 2.09294181 0.030567234 0.095679111 Up 0.3785189 0.7497358 0 1.946346 1.401985 0.5850761 XP_011077807.1 E3 ubiquitin-protein ligase PUB23 [Sesamum indicum] Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YC1Z e3 ubiquitin-protein ligase Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: cytosol (GO:0005829);|Biological Process: defense response (GO:0006952);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to chitin (GO:0010200);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: protein autoubiquitination (GO:0051865); -- -- TRINITY_DN13432_c1_g1_i1 4.030699976 8.061399952 0 0 #NAME? 0.00377213 0.016638645 Down 0.668399 0.969856 1.524265 0 0 0 XP_015575166.1 uncharacterized protein LOC107261307 [Ricinus communis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13435_c0_g1_i1 220.9090786 120.4971255 321.3210317 2.66662819 1.415016683 8.24E-15 1.88E-13 Up 17.16453 15.17246 21.12025 35.70629 40.43807 39.00401 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13435_c0_g2_i1 189.8317291 95.04372357 284.6197347 2.994618939 1.582372434 5.69E-16 1.42E-14 Up 16.15743 12.06663 16.27358 32.58261 35.75072 39.40142 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13444_c0_g1_i1 39.57536689 23.40131317 55.7494206 2.382320179 1.252367322 0.007894136 0.031249544 Up 3.048601 1.676053 3.830266 5.509708 3.594631 7.490556 XP_011085034.1 thaumatin-like protein [Sesamum indicum] Q53MB8|TLPH_ORYSJ Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0706600 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBU8 Thaumatin family -- PF00314.16 Thaumatin family TRINITY_DN13446_c0_g1_i1 38.1108712 17.25541633 58.96632608 3.417264757 1.772842027 0.040114146 0.118924615 Up 5.376841 1.855151 0.7378714 11.3995 2.706062 8.159689 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13447_c0_g1_i2 19.83908328 34.15534022 5.522826346 0.161697301 -2.628632492 4.89E-05 0.000346912 Down 2.855522 2.043579 1.969794 0.4843825 0.2737324 0.1527773 XP_022880843.1 uncharacterized protein LOC111398123 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13454_c0_g1_i2 32.64095137 64.51032604 0.771576693 0.011960515 -6.385576733 2.19E-09 3.00E-08 Down 5.223052 8.600874 3.713879 8.50E-66 6.96E-66 0.171794 XP_018503343.1 PREDICTED: uncharacterized protein LOC108867345 [Pyrus x bretschneideri] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN13467_c0_g1_i1 20.78682383 11.05019545 30.52345221 2.762254509 1.465846253 0.012857998 0.046990024 Up 0.3973341 1.144257 1.000836 1.771937 1.777325 2.091202 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1346_c0_g1_i1 17.64186946 32.19743214 3.086306774 0.095855681 -3.382992257 3.09E-06 2.74E-05 Down 7.262305 8.607392 4.626076 0 0 1.63895 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13470_c0_g1_i1 76.06692354 45.12636604 107.007481 2.371285136 1.245669151 1.77E-05 0.00013686 Up 6.96698 9.668797 5.212056 13.92154 13.75207 14.12483 XP_016200854.1 uncharacterized protein LOC107642038 [Arachis ipaensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13476_c0_g1_i1 52.87263977 72.35080386 33.39447568 0.461563298 -1.115399583 0.001678942 0.008257012 Down 10.28339 9.07722 8.863325 4.164116 1.401486 5.03476 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13481_c0_g1_i1 78.95669307 137.2169028 20.69648329 0.150830422 -2.729000655 4.25E-17 1.15E-15 Down 10.63351 10.78218 7.886714 0.6983299 1.849243 0.995769 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13491_c0_g1_i1 64.64130787 24.12322852 105.1593872 4.359258428 2.124082733 2.73E-10 4.13E-09 Up 1.248788 0.9640063 1.32828 3.95004 4.261937 4.253856 XP_011089226.1 UDP-glycosyltransferase 87A1-like [Sesamum indicum] O64733|U87A2_ARATH UDP-glycosyltransferase 87A2 OS=Arabidopsis thaliana OX=3702 GN=UGT87A2 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Biological Process: regulation of flower development (GO:0009909);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN13504_c0_g1_i1 161.1599445 310.4689179 11.85097108 0.0381712 -4.711371658 8.76E-66 1.37E-63 Down 31.68674 27.1219 26.95253 0.7608884 1.13445 0.8296355 EYU35669.1 hypothetical protein MIMGU_mgv1a015417mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13508_c0_g1_i2 13.70819466 27.41638932 0 0 #NAME? 9.05E-08 1.00E-06 Down 2.853905 1.143736 3.278121 0 0 0 ABG37650.2 "CCHC-type integrase, partial [Populus trichocarpa]" Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN13511_c0_g1_i1 9.7018855 17.93900821 1.464762789 0.081652384 -3.61436118 0.000486185 0.002755921 Down 1.699689 1.981329 1.032084 0.2134127 0.1071128 0 XP_011081240.1 uncharacterized protein LOC105164313 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- E COG1794 aspartate racemase -- PF01177.21 Asp/Glu/Hydantoin racemase TRINITY_DN13513_c0_g1_i2 17.09159567 28.97303669 5.210154649 0.179827703 -2.475312802 0.000335821 0.001983338 Down 3.913858 2.04062 2.344618 0.296281 0.4438996 0.4697942 BAT88833.1 hypothetical protein VIGAN_05245900 [Vigna angularis var. angularis] -- -- cic:CICLE_v10032743mg K00799 "GST, gst" glutathione S-transferase ko00480 Glutathione metabolism -- -- -- -- -- O COG0625 glutathione Stransferase -- -- -- TRINITY_DN13514_c0_g2_i1 10.69257611 16.96485343 4.420298793 0.260556262 -1.940333168 0.022286077 0.07398756 Down 1.624075 2.038022 2.083892 0.5018024 0.4990967 0.2187768 XP_011077237.1 transcriptional activator DEMETER [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG0177 endonuclease III -- -- -- TRINITY_DN13521_c0_g1_i1 13.04598881 1.933947097 24.15803052 12.4915674 3.642882608 0.000366808 0.002142097 Up 0.1441992 0.277895 0.3337516 0.9988415 3.59115 2.931751 PIN01702.1 hypothetical protein CDL12_25788 [Handroanthus impetiginosus] K4BWV2|NAP1_SOLLC NAC domain-containing protein 1 OS=Solanum lycopersicum OX=4081 GN=NAP1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111BY0 "NAC domain protein, IPR003441 source" "Molecular Function: DNA binding (GO:0003677);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);" -- -- TRINITY_DN13521_c0_g2_i1 9.482256562 3.05020454 15.91430858 5.217456197 2.383346583 0.010346001 0.039159177 Up 0.235431 0.6817885 0.7464742 2.259253 2.488287 1.847827 PIN01702.1 hypothetical protein CDL12_25788 [Handroanthus impetiginosus] O22798|NAC41_ARATH NAC domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=NAC041 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111BY0 "NAC domain protein, IPR003441 source" Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634); PF02365.14 No apical meristem (NAM) protein TRINITY_DN13526_c0_g1_i3 18.57906185 8.151814452 29.00630925 3.558264165 1.83117362 0.002442872 0.01143542 Up 0.7753754 0.982435 0.3853342 1.709238 2.202983 2.260362 XP_011088907.1 uncharacterized protein LOC105170022 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03107.15 C1 domain TRINITY_DN13529_c0_g1_i1 6.659737496 13.31947499 0 0 #NAME? 0.00040537 0.002345268 Down 3.049858 3.584212 0.6982478 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13529_c2_g1_i1 6.09872743 12.19745486 0 0 #NAME? 0.020269344 0.068504677 Down 4.678663 2.294036 0 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13530_c0_g2_i1 22.84547076 32.66714287 13.02379865 0.398681902 -1.326689979 0.026519246 0.085248081 Down 4.178775 2.289438 2.281482 0.1996389 1.392886 1.212532 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13535_c0_g1_i2 11.53073075 23.0614615 0 0 #NAME? 9.65E-08 1.07E-06 Down 3.862864 4.472476 2.283799 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13539_c0_g1_i1 33.95997559 20.51445755 47.40549364 2.310833397 1.20841325 0.008994362 0.034883893 Up 2.601472 4.320465 5.46526 6.666219 6.694745 9.688794 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13541_c0_g1_i1 48.45995374 2.904581393 94.01532609 32.36794339 5.016493797 1.01E-23 4.12E-22 Up 0 0.2533068 0.4961874 7.224811 5.255808 6.025354 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13557_c0_g1_i1 13.23534531 20.93204242 5.538648192 0.264601422 -1.918107279 0.011627727 0.043157595 Down 3.678235 3.253797 3.396108 1.64086 0.3346172 0.3443869 XP_006339735.1 PREDICTED: uncharacterized protein LOC102589709 [Solanum tuberosum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XNRZ NC domain-containing protein -- -- -- TRINITY_DN13558_c0_g3_i1 8.246611722 13.52186559 2.971357851 0.219744667 -2.186099943 0.031359313 0.097733836 Down 2.804941 1.80067 1.300269 0.6132814 0.1513763 0.3246667 EYU20468.1 hypothetical protein MIMGU_mgv1a002711mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZWEA Cell division cycle associated 7 -- PF10497.8 Zinc-finger domain of monoamine-oxidase A repressor R1 TRINITY_DN13565_c0_g2_i1 5.238981709 0 10.47796342 Inf Inf 0.000343336 0.00202351 Up 4.69E-58 0 3.87E-70 1.656279 0.9285462 2.12013 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13573_c0_g1_i1 1448.244456 746.9352585 2149.553653 2.877831282 1.524982014 2.40E-70 4.11E-68 Up 74.90413 81.77779 76.28121 176.8517 171.6188 192.5637 XP_012842416.1 PREDICTED: glycine-rich protein 3 short isoform-like [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF07172.10 Glycine rich protein family TRINITY_DN13575_c0_g1_i1 1554.126175 3102.333187 5.91916259 0.001907971 -9.033744837 0 0 Down 292.1634 294.4213 313.9388 0.8550067 0.2842908 0.3129625 XP_012831269.1 PREDICTED: EG45-like domain containing protein [Erythranthe guttata] Q9ZP41|EGC_CITJA EG45-like domain containing protein OS=Citrus jambhiri OX=64884 GN=CjBAp12 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41123UD EG45-like domain containing Cellular Component: extracellular region (GO:0005576); PF03330.17 Lytic transglycolase TRINITY_DN13583_c0_g1_i1 57.61563921 19.66284033 95.56843809 4.860357734 2.281062504 9.04E-06 7.37E-05 Up 1.254121 0.8689749 0.8914629 2.763291 5.372873 3.701348 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13588_c0_g2_i1 15.08645738 7.494390933 22.67852383 3.026066299 1.597443596 0.020363176 0.068755257 Up 0.3595709 1.412652 0.8477001 3.069067 1.350798 1.98416 XP_011080440.1 probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Sesamum indicum] Q6JN47|EIX1_SOLLC Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF08263.11,PF12799.6,PF13855.5" Leucine rich repeat N-terminal domain|Leucine Rich repeats (2 copies)|Leucine rich repeat TRINITY_DN13588_c0_g3_i1 20.59906683 10.11436413 31.08376953 3.073230224 1.619755847 0.018618453 0.063866653 Up 1.384039 0.4479384 0.7140968 3.295541 1.625861 1.485912 XP_012844646.1 PREDICTED: leucine-rich repeat receptor-like protein kinase PEPR1 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF13855.5,PF12799.6,PF00560.32,PF13516.5" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine Rich repeat TRINITY_DN13588_c0_g4_i1 16.08442725 6.025478153 26.14337636 4.338805269 2.117297838 0.016428317 0.057547434 Up 0 0.9914779 0.4502487 1.295455 2.723317 1.09116 PIN07762.1 Non-specific serine/threonine protein kinase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat -- "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN13595_c0_g1_i2 177.3785764 333.9035289 20.85362381 0.062454038 -4.001061328 7.88E-61 1.14E-58 Down 36.51621 41.30472 43.51982 1.529522 2.168894 2.400048 EYU39929.1 hypothetical protein MIMGU_mgv1a016953mg [Erythranthe guttata] Q01417|PM1_SOYBN 18 kDa seed maturation protein OS=Glycine max OX=3847 GN=GMPM1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YTH0 18 kDa seed maturation Biological Process: embryo development ending in seed dormancy (GO:0009793);|Molecular Function: phosphatidylcholine binding (GO:0031210);|Molecular Function: disaccharide binding (GO:0048030);|Molecular Function: oligosaccharide binding (GO:0070492); -- -- TRINITY_DN13597_c0_g1_i1 12.49010095 22.06649816 2.913703731 0.132041963 -2.920931605 0.036617493 0.110620116 Down 5.53491 0.5877042 3.504311 0.4184061 0.6437504 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13598_c0_g1_i1 62.40444765 124.8088953 0 0 #NAME? 2.48E-39 1.94E-37 Down 11.40983 13.55095 11.66267 0 1.46E-33 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13598_c0_g2_i2 53.20116431 105.6778581 0.724470471 0.006855461 -7.188530529 5.67E-31 3.31E-29 Down 8.483628 10.61311 11.50711 0 0.1874719 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13602_c0_g1_i1 16.33447151 30.42487228 2.244070747 0.07375777 -3.761061142 1.50E-06 1.40E-05 Down 2.887066 5.50566 4.026192 0 0.3730198 0.3681312 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13603_c0_g1_i3 30.8075179 18.95640856 42.65862724 2.250353863 1.17015188 0.008947996 0.034718896 Up 3.510077 2.741084 1.634679 5.752282 4.397355 4.266343 BAT90197.1 hypothetical protein VIGAN_06139200 [Vigna angularis var. angularis] Q94BV7|NDB2_ARATH "External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDB2 PE=1 SV=1" vra:106756246 K17871 ndh1 NADH:ubiquinone reductase (non-electrogenic) -- -- KOG2495 NADH-dehydrogenase (ubiquinone) [C] METABOLISM Energy production and conversion C COG1252 Nadh dehydrogenase Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Cellular Component: mitochondrial intermembrane space (GO:0005758);|Cellular Component: peroxisome (GO:0005777);|Molecular Function: oxidoreductase activity (GO:0016491);|Biological Process: oxidation-reduction process (GO:0055114); -- -- TRINITY_DN13605_c0_g1_i1 84.41550956 56.09190968 112.7391094 2.009899647 1.00712347 0.000359286 0.002104395 Up 4.587713 9.782497 7.026894 10.33057 11.62229 12.7158 XP_011083342.1 protein transport protein Sec24-like At4g32640 [Sesamum indicum] -- -- sind:105165877 K14007 SEC24 protein transport protein SEC24 ko04141 Protein processing in endoplasmic reticulum -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1360_c0_g1_i1 22.22078334 12.46389958 31.9776671 2.565622973 1.359309177 0.012440449 0.045673673 Up 0.4437282 0.7448643 0.3628343 0.9534124 1.072642 1.136096 AMQ23369.1 ribosomal protein S3 (mitochondrion) [Oryza minuta] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XNN8 mRNA transport -- -- -- TRINITY_DN13620_c0_g1_i1 28.58336183 41.24186717 15.92485648 0.386133257 -1.37282928 0.006538086 0.026634059 Down 4.56367 4.735094 3.072127 1.484519 1.326208 1.053518 XP_011093079.1 uncharacterized protein LOC105173120 [Sesamum indicum] Q6DST1|Y1465_ARATH Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YMTZ harpin-induced protein 1 domain containing protein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); PF03168.12 Late embryogenesis abundant protein TRINITY_DN13621_c0_g1_i2 21.10073736 33.72311237 8.47836235 0.251411028 -1.99188016 0.000916923 0.004830207 Down 3.154826 2.565582 2.406595 0.685924 0.6027428 0.3214081 PIN11829.1 hypothetical protein CDL12_15554 [Handroanthus impetiginosus] Q84MC2|LOG8_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 OS=Arabidopsis thaliana OX=3702 GN=LOG8 PE=1 SV=1 pmum:103322317 K06966 K06966 pyrimidine/purine-5'-nucleotide nucleosidase -- -- -- -- -- -- -- S COG1611 decarboxylase "Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: cytokinin biosynthetic process (GO:0009691);|Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799);|Molecular Function: protein homodimerization activity (GO:0042803);" PF03641.13 Possible lysine decarboxylase TRINITY_DN13623_c0_g1_i1 12.70612175 23.91619633 1.496047164 0.062553725 -3.998760396 1.20E-05 9.63E-05 Down 3.615875 3.537431 4.041607 0 0.3350724 0.3219502 XP_022853141.1 uncharacterized protein LOC111374661 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13623_c0_g2_i1 7.384131306 14.76826261 0 0 #NAME? 2.92E-05 0.000216617 Down 2.647236 0.9191941 2.726738 0 0 0 XP_022895266.1 uncharacterized protein LOC111409451 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13628_c0_g3_i1 3.056404934 6.112809867 0 0 #NAME? 0.018820192 0.064475846 Down 1.874779 1.096158 0.6005129 0 0 0 KZV54506.1 peroxidase 64 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN13637_c0_g1_i1 791.3930591 1578.64439 4.141728104 0.002623598 -8.57423766 0 0 Down 158.1215 153.0342 143.8292 0.2553653 0.1276648 0.5390642 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF07172.10 Glycine rich protein family TRINITY_DN13639_c0_g1_i2 19.15287733 33.86717671 4.438577955 0.131058399 -2.931718283 1.34E-05 0.000106095 Down 2.098683 2.335006 1.699524 0.1971027 0.2565003 0.1975429 GAU27881.1 hypothetical protein TSUD_159750 [Trifolium subterraneum] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111MK6 Retrotransposon protein Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN13646_c0_g1_i2 38.63327953 24.90963569 52.35692338 2.101874312 1.071676402 0.00884264 0.034386057 Up 1.586449 2.396949 1.593461 3.345547 3.019269 2.973013 XP_022859690.1 "(-)-isopiperitenol/(-)-carveol dehydrogenase, mitochondrial-like [Olea europaea var. sylvestris]" Q5C9I9|ISPD_MENPI "(-)-isopiperitenol/(-)-carveol dehydrogenase, mitochondrial OS=Mentha piperita OX=34256 PE=1 SV=1" -- -- -- -- -- -- KOG0725 Reductases with broad range of substrate specificities [R] POORLY CHARACTERIZED General function prediction only S COG1028 Dehydrogenase reductase Molecular Function: nucleotide binding (GO:0000166);|Cellular Component: mitochondrion (GO:0005739);|Molecular Function: isopiperitenol dehydrogenase activity (GO:0018458);|Molecular Function: carveol dehydrogenase activity (GO:0018459);|Biological Process: menthol biosynthetic process (GO:0031525); "PF13561.5,PF00106.24,PF08659.9" Enoyl-(Acyl carrier protein) reductase|short chain dehydrogenase|KR domain TRINITY_DN13648_c0_g1_i1 12.81616742 5.164140053 20.46819478 3.963524337 1.986783835 0.012040436 0.04444231 Up 0.3035812 0.5831404 1.149162 2.770485 1.665838 2.352049 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13651_c0_g2_i2 45.2925553 18.79838463 71.78672598 3.818770996 1.933108407 9.54E-07 9.18E-06 Up 1.742847 2.20198 2.00335 7.203042 6.473052 4.768248 XP_011078506.2 RING-H2 finger protein ATL3-like [Sesamum indicum] Q9SI09|XERIC_ARATH Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1 -- -- -- -- -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to salt stress (GO:0009651);|Biological Process: abscisic acid metabolic process (GO:0009687);|Biological Process: abscisic acid biosynthetic process (GO:0009688);|Biological Process: response to gibberellin (GO:0009739);|Biological Process: response to chitin (GO:0010200);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transferase activity (GO:0016740);|Molecular Function: metal ion binding (GO:0046872); "PF13639.5,PF17123.4,PF13923.5,PF00097.24,PF12678.6" "Ring finger domain|RING-like zinc finger|Zinc finger, C3HC4 type (RING finger)|Zinc finger, C3HC4 type (RING finger)|RING-H2 zinc finger domain" TRINITY_DN13653_c1_g1_i3 49.37721721 98.75443442 0 0 #NAME? 2.09E-31 1.23E-29 Down 6.122383 5.325838 5.936181 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13655_c0_g1_i1 31.482911 43.40524864 19.56057337 0.450649955 -1.149920847 0.015468431 0.054770554 Down 4.952507 3.783931 3.686292 2.030752 1.559498 0.8857845 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13665_c0_g1_i1 24.2095145 47.67100542 0.748023582 0.015691374 -5.99388449 2.11E-13 4.33E-12 Down 6.356999 4.764833 4.520741 0 0.1335935 0.142894 PIN19726.1 hypothetical protein CDL12_07591 [Handroanthus impetiginosus] Q941R6|MLP31_ARATH MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111C37 response to biotic stimulus Biological Process: defense response (GO:0006952); PF00407.18 Pathogenesis-related protein Bet v I family TRINITY_DN13665_c0_g2_i1 7.170338174 14.34067635 0 0 #NAME? 4.16E-05 0.000299174 Down 1.776393 1.714537 2.005465 0 1.12E-27 5.24E-36 PIN19726.1 hypothetical protein CDL12_07591 [Handroanthus impetiginosus] Q9SSK7|MLP34_ARATH MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41114YV Bet_v_1 Biological Process: defense response (GO:0006952); PF00407.18 Pathogenesis-related protein Bet v I family TRINITY_DN13685_c0_g1_i1 16.3524722 29.40790963 3.297034761 0.112113877 -3.156963235 2.39E-05 0.000180099 Down 2.388727 3.18743 2.083826 0.5512904 0.1797718 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13687_c0_g1_i1 10.30868733 17.14527955 3.47209512 0.202510266 -2.30393305 0.014901054 0.0530804 Down 4.612893 1.776748 2.506499 0 0 1.49283 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1368_c0_g1_i1 42.50774073 5.023158494 79.99232297 15.92470615 3.993194846 9.09E-17 2.41E-15 Up 0 1.092214 0.8895209 7.193061 9.159952 9.715859 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13693_c0_g1_i2 23.46600443 15.62115812 31.31085075 2.004387287 1.003161293 0.046271503 0.133198194 Up 0.8775194 0.4364509 0.2497522 0.8426805 0.6795521 0.9723163 XP_012834110.1 PREDICTED: probable beta-D-xylosidase 2 [Erythranthe guttata] Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- G COG1472 hydrolase family 3 "Cellular Component: extracellular region (GO:0005576);|Molecular Function: xylan 1,4-beta-xylosidase activity (GO:0009044);|Cellular Component: plant-type cell wall (GO:0009505);|Biological Process: arabinan catabolic process (GO:0031222);|Biological Process: xylan catabolic process (GO:0045493);|Molecular Function: alpha-L-arabinofuranosidase activity (GO:0046556);" "PF01915.21,PF00933.20,PF14310.5" Glycosyl hydrolase family 3 C-terminal domain|Glycosyl hydrolase family 3 N terminal domain|Fibronectin type III-like domain TRINITY_DN13694_c0_g1_i1 65.66098784 40.47823024 90.84374544 2.24426179 1.166240974 0.008686172 0.033891303 Up 6.609724 12.95635 4.708349 17.78597 16.35371 9.701045 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13695_c0_g2_i1 277.450215 389.2464945 165.6539355 0.425575921 -1.232511568 5.99E-05 0.000416481 Down 48.48628 36.26835 30.67922 13.47468 10.28809 15.9634 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1369_c0_g1_i1 14.48688675 26.71388091 2.259892593 0.084596192 -3.56326347 0.000585983 0.003251778 Down 7.263528 7.124954 2.105552 0.4757353 3.30E-06 0.594935 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13700_c0_g1_i1 28.59571885 13.37580474 43.81563296 3.275738081 1.711820008 0.000615492 0.003389834 Up 0.3322607 0.8618553 0.7237981 1.624928 1.809434 1.669582 ACL86431.1 "Act5C-PA, partial [synthetic construct]" P43239|ACT1_PNECA Actin-1 OS=Pneumocystis carinii OX=4754 PE=2 SV=1 mgl:MGL_1986 K05692 ACTB_G1 actin beta/gamma 1 ko04145 Phagosome KOG0676 Actin and related proteins [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5277 Actin-related protein Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytoskeleton (GO:0005856); PF00022.18 Actin TRINITY_DN13701_c0_g1_i2 16.01394141 32.02788282 0 0 #NAME? 1.46E-10 2.28E-09 Down 2.46537 1.811661 1.539659 0 0 0 XP_015388102.1 uncharacterized protein LOC107177998 [Citrus sinensis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111MDI ZnF_PMZ -- -- -- TRINITY_DN13703_c0_g1_i1 21.76635222 42.08376351 1.448940942 0.034429928 -4.860193031 6.41E-09 8.28E-08 Down 1.389019 2.864105 3.065596 0 0.2168478 0 KHN30958.1 "Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Glycine soja]" Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF00665.25 Integrase core domain TRINITY_DN13707_c0_g1_i1 36.69517671 50.65824212 22.73211131 0.448734704 -1.156065331 0.010665448 0.040107422 Down 8.362776 8.743743 6.525704 4.610529 3.261938 0.6447308 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13712_c0_g1_i1 107.9442188 29.59253963 186.295898 6.295367017 2.654290489 2.72E-23 1.08E-21 Up 1.101574 1.715347 0.9374772 6.996457 6.143524 5.892364 BBG80452.1 cytochrome P450 716A259 [Avicennia marina] A5BFI4|C7A17_VITVI Beta-amyrin 28-monooxygenase OS=Vitis vinifera OX=29760 GN=CYP716A17 PE=1 SV=2 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: saponin biosynthetic process (GO:0016135);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN13713_c0_g1_i2 1284.034645 1962.918208 605.1510825 0.308291543 -1.697632782 1.70E-73 3.06E-71 Down 148.325 133.8832 146.6921 30.57838 37.24323 38.97796 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13716_c0_g1_i1 334.6032174 461.9785224 207.2279124 0.448566118 -1.156607443 9.85E-15 2.24E-13 Down 17.90274 14.61301 15.94377 6.147814 5.709082 5.713775 PIN17379.1 "putative membrane protein, predicted efflux pump [Handroanthus impetiginosus]" Q38956|DTX29_ARATH Protein DETOXIFICATION 29 OS=Arabidopsis thaliana OX=3702 GN=DTX29 PE=1 SV=1 sind:105168299 K03327 "TC.MATE, SLC47A, norM, mdtK, dinF" "multidrug resistance protein, MATE family" -- -- KOG1347 "Uncharacterized membrane protein, predicted efflux pump" [R] POORLY CHARACTERIZED General function prediction only V COG0534 Mate efflux family protein Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: drug transmembrane transport (GO:0006855);|Molecular Function: drug transmembrane transporter activity (GO:0015238);|Molecular Function: antiporter activity (GO:0015297);|Cellular Component: integral component of membrane (GO:0016021); PF01554.17 MatE TRINITY_DN1371_c0_g1_i1 3.642137979 7.284275959 0 0 #NAME? 0.006806502 0.027581729 Down 1.007892 0.7164073 1.52995 0 0 0 SJX31062.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" -- -- -- -- -- -- -- -- -- -- -- -- -- U ENOG410ZR3T mast cell activation -- PF13895.5 Immunoglobulin domain TRINITY_DN13734_c0_g1_i1 6.090206242 12.18041248 0 0 #NAME? 0.000227442 0.001394421 Down 3.683455 2.040481 2.02358 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13734_c0_g2_i1 14.26786477 28.53572955 0 0 #NAME? 1.30E-09 1.82E-08 Down 1.693844 1.657978 2.166277 0 0 0 BAN84686.1 Large protein [Rabies viral vector pHEP5.0-CVSG-mRFP] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF14318.5 Mononegavirales mRNA-capping region V TRINITY_DN13737_c0_g1_i1 13.79184822 27.58369643 0 0 #NAME? 3.53E-09 4.72E-08 Down 5.560598 3.016921 3.089543 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13738_c0_g1_i1 159.1700014 266.1321294 52.20787345 0.196172757 -2.349803393 1.98E-17 5.46E-16 Down 27.57741 29.06708 20.41602 4.633326 4.286482 3.286512 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13739_c0_g1_i1 15.72869795 24.28701514 7.170380758 0.295235158 -1.760063559 0.009671286 0.037050053 Down 1.562378 1.421217 1.300332 0.07605597 0.3026432 0.6497338 -- -- Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica OX=39947 GN=CESA9 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: plant-type primary cell wall biogenesis (GO:0009833);|Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: cellulose synthase activity (GO:0016759);|Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);|Biological Process: cellulose biosynthetic process (GO:0030244);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: cell wall organization (GO:0071555); -- -- TRINITY_DN13741_c0_g1_i3 21.11451251 13.53538748 28.69363755 2.119897756 1.083994685 0.047015172 0.134911163 Up 1.032443 0.5537621 0.4355176 0.8066468 1.261171 1.433922 XP_011098970.2 "histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Sesamum indicum]" Q8GZB6|SUVH4_ARATH "Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana OX=3702 GN=SUVH4 PE=1 SV=2" sind:105177488 K11420 EHMT euchromatic histone-lysine N-methyltransferase ko00310 Lysine degradation KOG1082 "Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing" [BK] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics |Transcription S COG2940 Histone-lysine N-methyltransferase "Cellular Component: chromosome, centromeric region (GO:0000775);|Cellular Component: nucleus (GO:0005634);|Molecular Function: zinc ion binding (GO:0008270);|Molecular Function: methyl-CpG binding (GO:0008327);|Biological Process: maintenance of DNA methylation (GO:0010216);|Molecular Function: double-stranded methylated DNA binding (GO:0010385);|Molecular Function: methyl-CpNpG binding (GO:0010428);|Molecular Function: methyl-CpNpN binding (GO:0010429);|Biological Process: histone methylation (GO:0016571);|Biological Process: peptidyl-lysine methylation (GO:0018022);|Molecular Function: histone methyltransferase activity (H3-K9 specific) (GO:0046974);|Biological Process: histone H3-K9 methylation (GO:0051567);" "PF05033.15,PF00856.27" Pre-SET motif|SET domain TRINITY_DN13743_c0_g1_i2 114.3247912 155.5153278 73.13425459 0.470270395 -1.088437583 7.47E-06 6.19E-05 Down 13.69177 14.59596 15.28289 4.49738 6.415475 5.565858 XP_011069885.1 pathogenesis-related protein PR-1-like [Sesamum indicum] Q40374|PR1_MEDTR Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV=1 -- -- -- -- -- -- KOG3017 Defense-related protein containing SCP domain [S] POORLY CHARACTERIZED Function unknown S COG2340 Scp-like extracellular Cellular Component: extracellular region (GO:0005576);|Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607); PF00188.25 Cysteine-rich secretory protein family TRINITY_DN13746_c0_g1_i2 64.78734561 8.588683895 120.9860073 14.086676 3.816259318 1.10E-24 4.71E-23 Up 1.51794 1.864009 0 11.7374 12.61406 14.70501 KZV27471.1 hypothetical protein F511_02580 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1374_c0_g1_i1 33.9956653 47.62579817 20.36553243 0.427615562 -1.225613739 0.006872889 0.027820676 Down 7.383079 5.40948 5.829796 0.9483565 3.371331 2.082596 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13752_c1_g1_i1 20.70353479 11.5817181 29.82535148 2.575209586 1.364689852 0.015884288 0.055954951 Up 0.6621405 0.4947271 0.3862909 1.216841 0.7604237 1.203227 XP_011082028.2 glutamate receptor 2.7-like [Sesamum indicum] Q9C5V5|GLR28_ARATH Glutamate receptor 2.8 OS=Arabidopsis thaliana OX=3702 GN=GLR2.8 PE=2 SV=2 sind:105164905 K05387 GRIP "glutamate receptor, ionotropic, plant" -- -- KOG1052 Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [PET] METABOLISM|METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Amino acid transport and metabolism |Signal transduction mechanisms P ENOG41120B7 Glutamate-gated receptor that probably acts as non- selective cation channel (By similarity) Molecular Function: ionotropic glutamate receptor activity (GO:0004970);|Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: intracellular (GO:0005622);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: calcium ion transport (GO:0006816);|Molecular Function: glutamate receptor activity (GO:0008066);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: calcium-mediated signaling (GO:0019722);|Biological Process: cellular response to amino acid stimulus (GO:0071230); PF00060.25 Ligand-gated ion channel TRINITY_DN13765_c0_g1_i2 105.5988448 162.6158332 48.58185647 0.298752314 -1.742978207 0.008026066 0.031691652 Down 11.75179 35.14443 30.16651 7.697806 3.336601 7.575315 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13765_c0_g2_i1 136.9864025 207.8326636 66.14014149 0.318237472 -1.651824373 0.006521551 0.026576244 Down 57.15955 42.53858 22.35925 8.56778 14.4989 8.234134 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13767_c0_g1_i1 25.47786182 50.95572363 0 0 #NAME? 2.02E-10 3.12E-09 Down 9.476307 4.54953 5.283188 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13767_c0_g2_i1 24.77479334 49.54958669 0 0 #NAME? 5.24E-16 1.31E-14 Down 4.339695 5.531172 7.753393 0 0 0 -- -- Q9C723|NADE_ARATH Glutamine-dependent NAD(+) synthetase OS=Arabidopsis thaliana OX=3702 GN=At1g55090 PE=2 SV=1 -- -- -- -- -- -- KOG2303 "Predicted NAD synthase, contains CN hydrolase domain" [HR] METABOLISM|POORLY CHARACTERIZED Coenzyme transport and metabolism |General function prediction only -- -- -- Molecular Function: NAD+ synthase (glutamine-hydrolyzing) activity (GO:0003952);|Molecular Function: glutaminase activity (GO:0004359);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: NAD biosynthetic process (GO:0009435); -- -- TRINITY_DN13768_c0_g1_i1 33.12770586 13.46313646 52.79227526 3.921246393 1.971312297 1.92E-05 0.000147777 Up 0.7544852 0.5376069 0.5768823 1.955787 1.963035 2.103165 ALR74633.1 gibberellin biosynthesis-related protein GA20ox1 [Salvia miltiorrhiza] Q39111|GAOX2_ARATH Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=GA20OX2 PE=2 SV=1 sind:105160538 K05282 E1.14.11.12 gibberellin 20-oxidase ko00904 Diterpenoid biosynthesis KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: response to red or far red light (GO:0009639);|Biological Process: gibberellin biosynthetic process (GO:0009686);|Biological Process: response to gibberellin (GO:0009739);|Biological Process: unidimensional cell growth (GO:0009826);|Biological Process: flower development (GO:0009908);|Molecular Function: gibberellin 20-oxidase activity (GO:0045544);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213);|Biological Process: response to karrikin (GO:0080167); "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN13770_c0_g1_i4 24.03611566 48.07223131 0 0 #NAME? 9.38E-16 2.28E-14 Down 4.040212 4.408198 5.227458 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13771_c0_g1_i1 38.82776147 20.69796646 56.95755648 2.751843115 1.460398223 0.000467086 0.002658331 Up 1.563012 2.090212 1.584169 3.748947 3.62415 4.34818 EYU31397.1 hypothetical protein MIMGU_mgv1a021674mg [Erythranthe guttata] Q9FLU7|P2B12_ARATH Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: carbohydrate binding (GO:0030246); PF14299.5 Phloem protein 2 TRINITY_DN13774_c0_g1_i1 19.7959594 37.66297707 1.928941734 0.051215859 -4.287265572 0.001694755 0.008322156 Down 11.23792 8.279084 2.018571 0 0 0.8566021 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13777_c0_g1_i1 528.389171 745.8996061 310.8787359 0.416783617 -1.262629525 2.75E-24 1.15E-22 Down 46.64864 46.71265 41.99715 14.75776 16.42223 14.28989 XP_011077408.1 protein ALUMINUM SENSITIVE 3 [Sesamum indicum] Q9ZUT3|ALS3_ARATH Protein ALUMINUM SENSITIVE 3 OS=Arabidopsis thaliana OX=3702 GN=ALS3 PE=1 SV=1 sind:105161425 K02069 ABC.X2.P putative ABC transport system permease protein -- -- -- -- -- -- -- S COG0390 (ABC) transporter Molecular Function: UDP-glucose transmembrane transporter activity (GO:0005460);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of plasma membrane (GO:0005887);|Biological Process: response to aluminum ion (GO:0010044);|Cellular Component: vesicle membrane (GO:0012506); PF03649.12 Uncharacterised protein family (UPF0014) TRINITY_DN13777_c0_g2_i1 14.73965666 24.9205125 4.558800827 0.182933671 -2.450607453 0.008949839 0.034723079 Down 6.652979 2.421396 3.50159 0 0.3738663 1.475413 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1377_c0_g1_i1 10.00754436 17.0018986 3.013190124 0.177226685 -2.49633225 0.007509594 0.0299572 Down 1.763433 1.744533 4.180446 0.5469812 0 0.6173006 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13780_c0_g1_i2 38.9374608 59.76364849 18.11127311 0.303048317 -1.722380263 5.99E-05 0.000416523 Down 2.219729 2.686166 2.385004 0.5288984 0.7938279 0.4587851 XP_020547648.1 IAA-amino acid hydrolase ILR1-like 2 isoform X1 [Sesamum indicum] Q84XG9|ILL1_ORYSI IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica OX=39946 GN=ILL1 PE=2 SV=1 sind:105156767 K14664 ILR1 IAA-amino acid hydrolase -- -- -- -- -- -- -- E COG1473 amidohydrolase Cellular Component: endoplasmic reticulum lumen (GO:0005788);|Molecular Function: hydrolase activity (GO:0016787); "PF01546.27,PF07687.13" Peptidase family M20/M25/M40|Peptidase dimerisation domain TRINITY_DN13781_c0_g1_i3 36.48884104 13.57551544 59.40216663 4.37568407 2.129508577 1.79E-06 1.65E-05 Up 1.934332 2.572578 2.407931 9.671717 7.305354 7.609618 PIN19762.1 hypothetical protein CDL12_07552 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111EDR NA -- -- -- TRINITY_DN13783_c0_g1_i2 17.12553985 34.25107971 0 0 #NAME? 2.61E-11 4.44E-10 Down 2.721534 4.65514 2.94118 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13787_c0_g2_i2 15.04152474 24.20080453 5.882244948 0.243059893 -2.040616242 0.011615414 0.043129527 Down 1.180757 3.923898 3.755362 0.3404428 1.022834 0.3231184 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13787_c0_g4_i1 15.76707104 8.349966343 23.18417573 2.776559184 1.473298148 0.020704204 0.069673508 Up 1.271308 2.125769 0.3359681 2.260459 2.293326 3.718369 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13788_c0_g1_i1 37.93266521 10.80219472 65.0631357 6.023140424 2.590515894 3.29E-08 3.89E-07 Up 0.3232228 0.4623754 1.956375 4.369501 4.399764 4.678953 PHT78487.1 LOB domain-containing protein 11 [Capsicum annuum] Q9SK08|LBD11_ARATH LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHTF lob domain-containing protein -- PF03195.13 Lateral organ boundaries (LOB) domain TRINITY_DN1378_c0_g1_i1 9.998305383 16.32715219 3.669458577 0.224745781 -2.153634059 0.015676546 0.055386477 Down 2.763088 3.359572 3.595465 0 1.42798 0.4676058 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13794_c0_g1_i1 19.58075888 28.44927324 10.71224452 0.376538424 -1.409131001 0.020854743 0.07006064 Down 3.20021 1.517852 2.134346 1.216754 0.505128 0.3919239 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13796_c0_g1_i1 18.76726632 9.456940608 28.07759204 2.968993166 1.569973773 0.010289905 0.03897936 Up 0.8293996 0.5047523 0.8603459 1.239649 2.477542 1.342744 XP_012833208.1 PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9 [Erythranthe guttata] O82243|GH39_ARATH Putative indole-3-acetic acid-amido synthetase GH3.9 OS=Arabidopsis thaliana OX=3702 GN=GH3.9 PE=2 SV=1 sind:105163158 K14487 GH3 auxin responsive GH3 gene family ko04075 Plant hormone signal transduction -- -- -- -- -- S ENOG410YD5G Indole-3-acetic acid-amido synthetase Cellular Component: chloroplast envelope (GO:0009941);|Molecular Function: ligase activity (GO:0016874); PF03321.12 GH3 auxin-responsive promoter TRINITY_DN13801_c0_g1_i1 220.9435768 96.07757141 345.8095823 3.599274807 1.847706257 1.12E-12 2.16E-11 Up 9.338308 9.88565 15.1703 38.62511 27.63632 33.6051 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13806_c0_g3_i1 10.77240794 2.418703695 19.12611218 7.907587944 2.983237696 0.00069778 0.003794698 Up 0.548354 0.2708077 0.2092776 1.58825 1.868656 3.512228 XP_011100101.1 uncharacterized protein LOC105178332 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111KG5 expressed protein -- -- -- TRINITY_DN13808_c0_g1_i1 968.9923862 351.2876484 1586.697124 4.516803056 2.17530201 3.51E-103 9.16E-101 Up 43.31442 47.45557 42.95116 164.6172 167.3471 155.224 XP_011075272.1 "beta-D-glucosyl crocetin beta-1,6-glucosyltransferase-like [Sesamum indicum]" Q5NTH0|UGAT_BELPE Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase OS=Bellis perennis OX=41492 GN=UGAT PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Cellular Component: cytoplasm (GO:0005737);|Molecular Function: cyanidin-3-O-glucoside 2-O-glucuronosyltransferase activity (GO:0102160); "PF00201.17,PF04101.15" UDP-glucoronosyl and UDP-glucosyl transferase|Glycosyltransferase family 28 C-terminal domain TRINITY_DN13810_c0_g1_i2 15.47173391 23.48396848 7.459499344 0.317642197 -1.654525515 0.014603827 0.052251243 Down 2.466074 3.092514 3.328754 0.553251 0.8088657 0.978182 XP_011086180.1 cytochrome P450 77A3-like [Sesamum indicum] Q9LZ31|C77A4_ARATH Cytochrome P450 77A4 OS=Arabidopsis thaliana OX=3702 GN=CYP77A4 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Biological Process: fatty acid oxidation (GO:0019395);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN13812_c0_g1_i1 159.6631824 305.9631653 13.3631994 0.043675844 -4.517020615 7.91E-63 1.17E-60 Down 27.02336 24.85192 27.00373 1.60913 0.4780158 0.7594547 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13816_c0_g1_i3 92.0141272 139.1912584 44.83699599 0.322125085 -1.634307081 1.88E-08 2.30E-07 Down 18.23239 21.54191 20.27568 3.626557 2.828126 9.214279 XP_002301802.1 uncharacterized protein LOC7459495 [Populus trichocarpa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YY6X NA -- -- -- TRINITY_DN13819_c0_g1_i1 36.09160812 72.18321623 0 0 #NAME? 4.85E-23 1.90E-21 Down 8.830783 6.976312 6.166788 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13820_c0_g1_i1 152.5715991 42.90965006 262.2335481 6.111295424 2.611478224 1.83E-19 5.80E-18 Up 4.006184 3.126251 4.084405 16.39704 16.2727 22.55473 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13820_c0_g2_i1 28.29037663 8.511791282 48.06896198 5.647337955 2.49757097 1.15E-06 1.10E-05 Up 1.254094 1.313912 1.025777 7.006066 5.532448 3.912986 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13824_c0_g1_i1 16.80095944 32.15297793 1.448940942 0.045063973 -4.471881665 0.006666466 0.027092872 Down 5.946928 0.407552 6.438193 1.78E-69 0.4173937 9.83E-59 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13824_c0_g2_i1 11.74296508 23.48593016 0 0 #NAME? 6.78E-08 7.66E-07 Down 1.875808 3.086639 1.448921 6.29E-101 6.46E-102 8.37E-112 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13824_c0_g3_i1 25.6395036 36.95370821 14.32529899 0.38765525 -1.367153892 0.012527589 0.045935521 Down 2.89056 4.050414 2.017315 0.5834567 0.5939906 1.713669 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13828_c0_g1_i2 34.34004616 48.68416706 19.99592525 0.41072748 -1.28374662 0.005466294 0.022879805 Down 7.162167 5.877978 3.933585 2.026892 2.046435 1.513048 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1383_c0_g1_i2 4.308272796 7.863248061 0.753297531 0.095799792 -3.383833662 0.028317113 0.08997611 Down 1.012617 0.9562244 2.691363 0.2449867 0 0.248327 XP_011090059.1 putative RING-H2 finger protein ATL53 [Sesamum indicum] Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1 -- -- -- -- -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " -- -- -- Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transferase activity (GO:0016740);|Molecular Function: metal ion binding (GO:0046872); "PF13639.5,PF17123.4,PF13923.5,PF00097.24" "Ring finger domain|RING-like zinc finger|Zinc finger, C3HC4 type (RING finger)|Zinc finger, C3HC4 type (RING finger)" TRINITY_DN13842_c0_g1_i2 31.58643903 15.01006295 48.1628151 3.20870174 1.681989692 0.000273279 0.001646093 Up 1.424468 1.593043 1.157949 3.83252 3.813563 3.024813 PIN05128.1 hypothetical protein CDL12_22339 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YUVB NA -- -- -- TRINITY_DN13844_c0_g1_i9 152.3413608 4.6303752 300.0523465 64.8008711 6.017941302 3.13E-67 4.98E-65 Up 0.2633641 0.2933295 0.06564762 9.93851 9.038338 12.18272 AKN09620.1 basic helix-loop-helix transcription factor [Salvia miltiorrhiza] Q9M1K1|ORG2_ARATH Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YP85 Transcription factor "Molecular Function: RNA polymerase II regulatory region sequence-specific DNA binding (GO:0000977);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: regulation of transcription by RNA polymerase II (GO:0006357);|Molecular Function: transcription factor binding (GO:0008134);|Biological Process: cellular response to iron ion starvation (GO:0010106);|Molecular Function: protein dimerization activity (GO:0046983);|Biological Process: iron ion homeostasis (GO:0055072);|Cellular Component: RNA polymerase II transcription factor complex (GO:0090575);" PF00010.25 Helix-loop-helix DNA-binding domain TRINITY_DN13851_c0_g1_i2 44.73624257 86.56405536 2.908429782 0.033598585 -4.89545571 2.03E-17 5.59E-16 Down 13.69758 8.133447 11.30415 0.2452464 0.719911 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13856_c0_g1_i1 93.17294747 19.14836006 167.1975349 8.731689522 3.126260832 4.85E-26 2.25E-24 Up 2.282478 2.428267 1.329102 13.8383 15.71281 12.77776 XP_022863954.1 dirigent protein 22-like [Olea europaea var. sylvestris] Q9SS03|DIR21_ARATH Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618); PF03018.13 Dirigent-like protein TRINITY_DN13858_c0_g1_i4 30.13216282 45.77294757 14.49137807 0.316592635 -1.659300403 0.000746277 0.004023724 Down 4.9777 6.032076 3.888913 1.101681 1.414625 1.373475 XP_011074148.1 protein EPIDERMAL PATTERNING FACTOR 2 [Sesamum indicum] Q8LC53|EPF2_ARATH Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YU6S protein EPIDERMAL PATTERNING FACTOR Cellular Component: extracellular region (GO:0005576);|Biological Process: guard cell differentiation (GO:0010052);|Biological Process: stomatal complex development (GO:0010374);|Molecular Function: protein kinase binding (GO:0019901);|Biological Process: plant epidermis morphogenesis (GO:0090626);|Biological Process: negative regulation of stomatal complex development (GO:2000122); -- -- TRINITY_DN13859_c1_g1_i1 8.246945536 3.548483025 12.94540805 3.648152734 1.867166131 0.047916955 0.136918944 Up 0.8749261 0.4344264 0.523207 0.8727623 2.668515 1.621427 KZV51536.1 hypothetical protein F511_05852 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13859_c1_g2_i2 13.53529045 5.704105299 21.36647559 3.745806656 1.905276435 0.01512625 0.053730798 Up 0.1681477 0.1651973 1.424991 2.282704 2.448987 1.007623 PIN12945.1 hypothetical protein CDL12_14435 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13866_c0_g1_i1 9.366166998 18.732334 0 0 #NAME? 1.74E-06 1.60E-05 Down 2.413043 2.902826 2.884004 0 0 0 XP_011088561.1 "30S ribosomal protein 3, chloroplastic-like [Sesamum indicum]" P82412|RRP3_SPIOL "30S ribosomal protein 3, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP3 PE=1 SV=1" sind:105169755 K19032 PSRP3 30S ribosomal protein 3 -- -- -- -- -- -- -- J ENOG4111VGA Probably a ribosomal protein or a ribosome-associated protein (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: rRNA binding (GO:0019843); PF04839.12 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) TRINITY_DN13868_c0_g1_i2 21.95324086 37.94830349 5.958178231 0.157007763 -2.671092205 1.31E-05 0.000103793 Down 4.83234 4.420361 3.632642 0.4347454 0.5808673 0.664311 XP_011079838.1 truncated basic helix-loop-helix protein A [Sesamum indicum] E3SXU5|BHLHM_PEA Truncated basic helix-loop-helix protein A OS=Pisum sativum OX=3888 GN=BHLH PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG4111SJN Transcription factor Biological Process: flavonoid biosynthetic process (GO:0009813); PF14215.5 bHLH-MYC and R2R3-MYB transcription factors N-terminal TRINITY_DN13870_c0_g1_i1 19.23366633 27.9946432 10.47268947 0.374096194 -1.418518807 0.020220342 0.068382908 Down 1.484035 1.214864 1.022824 0.3541305 0.2721411 0.4929474 XP_020552648.1 DNA polymerase epsilon catalytic subunit A [Sesamum indicum] F4HW04|DPOE1_ARATH DNA polymerase epsilon catalytic subunit A OS=Arabidopsis thaliana OX=3702 GN=POL2A PE=1 SV=1 sind:105171162 K02324 POLE1 DNA polymerase epsilon subunit 1 ko03030|ko03420|ko00230|ko00240|ko03410 DNA replication|Nucleotide excision repair|Purine metabolism|Pyrimidine metabolism|Base excision repair KOG1798 "DNA polymerase epsilon, catalytic subunit A" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG0417 DNA polymerase "Molecular Function: nucleotide binding (GO:0000166);|Biological Process: mitotic cell cycle (GO:0000278);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Biological Process: leading strand elongation (GO:0006272);|Biological Process: base-excision repair, gap-filling (GO:0006287);|Biological Process: nucleotide-excision repair, DNA gap filling (GO:0006297);|Molecular Function: zinc ion binding (GO:0008270);|Molecular Function: single-stranded DNA 3'-5' exodeoxyribonuclease activity (GO:0008310);|Cellular Component: epsilon DNA polymerase complex (GO:0008622);|Biological Process: embryonic root morphogenesis (GO:0010086);|Biological Process: DNA replication proofreading (GO:0045004);|Cellular Component: apoplast (GO:0048046);|Biological Process: negative regulation of long-day photoperiodism, flowering (GO:0048579);|Biological Process: regulation of cell division (GO:0051302);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);" -- -- TRINITY_DN13870_c0_g2_i1 26.47306343 39.61493046 13.33119639 0.336519495 -1.57123801 0.002502981 0.011677061 Down 1.427287 2.017019 1.544155 0.2182423 0.6926323 0.4179654 XP_020552648.1 DNA polymerase epsilon catalytic subunit A [Sesamum indicum] F4HW04|DPOE1_ARATH DNA polymerase epsilon catalytic subunit A OS=Arabidopsis thaliana OX=3702 GN=POL2A PE=1 SV=1 sind:105171162 K02324 POLE1 DNA polymerase epsilon subunit 1 ko03030|ko03420|ko00230|ko00240|ko03410 DNA replication|Nucleotide excision repair|Purine metabolism|Pyrimidine metabolism|Base excision repair KOG1798 "DNA polymerase epsilon, catalytic subunit A" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG0417 DNA polymerase "Molecular Function: nucleotide binding (GO:0000166);|Biological Process: mitotic cell cycle (GO:0000278);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Biological Process: leading strand elongation (GO:0006272);|Biological Process: base-excision repair, gap-filling (GO:0006287);|Biological Process: nucleotide-excision repair, DNA gap filling (GO:0006297);|Molecular Function: zinc ion binding (GO:0008270);|Molecular Function: single-stranded DNA 3'-5' exodeoxyribonuclease activity (GO:0008310);|Cellular Component: epsilon DNA polymerase complex (GO:0008622);|Biological Process: embryonic root morphogenesis (GO:0010086);|Biological Process: DNA replication proofreading (GO:0045004);|Cellular Component: apoplast (GO:0048046);|Biological Process: negative regulation of long-day photoperiodism, flowering (GO:0048579);|Biological Process: regulation of cell division (GO:0051302);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);" "PF03104.18,PF00136.20,PF10108.8" "DNA polymerase family B, exonuclease domain|DNA polymerase family B|Predicted 3'-5' exonuclease related to the exonuclease domain of PolB" TRINITY_DN13871_c0_g1_i1 13.57291717 6.73811032 20.40772402 3.02870138 1.59869934 0.031241925 0.097434882 Up 0.3263461 0.8505676 0.9697245 1.496694 2.017072 1.672963 PIN19579.1 hypothetical protein CDL12_07746 [Handroanthus impetiginosus] Q9S7R3|LSH10_ARATH Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41119TN Protein of unknown function (DUF640) Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: mRNA transcription (GO:0009299);|Biological Process: response to light stimulus (GO:0009416);|Biological Process: post-embryonic plant morphogenesis (GO:0090698); PF04852.11 Protein of unknown function (DUF640) TRINITY_DN13874_c0_g1_i2 31.03829712 41.71070249 20.36589175 0.488265374 -1.034262624 0.025945716 0.083716555 Down 1.555813 2.012982 1.974819 0.6782921 0.8950575 0.6336916 XP_011076306.2 3-ketoacyl-CoA synthase 5-like [Sesamum indicum] Q9C6L5|KCS5_ARATH 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana OX=3702 GN=KCS5 PE=2 SV=1 sind:105160568 K15397 KCS 3-ketoacyl-CoA synthase ko00062 Fatty acid elongation -- -- -- -- -- U ENOG4111B0J 3-ketoacyl-CoA synthase Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Biological Process: response to cold (GO:0009409);|Biological Process: response to light stimulus (GO:0009416);|Molecular Function: fatty acid elongase activity (GO:0009922);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: pollen tube development (GO:0048868);|Molecular Function: 3-oxo-arachidoyl-CoA synthase activity (GO:0102336);|Molecular Function: 3-oxo-cerotoyl-CoA synthase activity (GO:0102337);|Molecular Function: 3-oxo-lignoceronyl-CoA synthase activity (GO:0102338);|Molecular Function: very-long-chain 3-ketoacyl-CoA synthase activity (GO:0102756); "PF08392.11,PF08541.9" FAE1/Type III polyketide synthase-like protein|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TRINITY_DN13877_c0_g1_i1 18.54354648 4.981471733 32.10562123 6.44500721 2.688181972 2.38E-05 0.000179366 Up 0.331421 0.9652848 0.08257414 1.538735 2.357363 3.002842 XP_011099228.1 salicylic acid-binding protein 2 [Sesamum indicum] Q6RYA0|SABP2_TOBAC Salicylic acid-binding protein 2 OS=Nicotiana tabacum OX=4097 GN=SABP2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111IVV esterase "Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);|Molecular Function: lipase activity (GO:0016298);|Molecular Function: methyl salicylate esterase activity (GO:0080031);" "PF00561.19,PF12697.6,PF12146.7" "alpha/beta hydrolase fold|Alpha/beta hydrolase family|Serine aminopeptidase, S33" TRINITY_DN13878_c0_g1_i3 26.91119976 42.71417808 11.10822144 0.260059351 -1.943087179 0.000160716 0.00101999 Down 6.397613 4.110075 8.197616 1.241298 1.543242 1.057699 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1387_c0_g1_i1 5.821563572 11.64312714 0 0 #NAME? 0.000312571 0.001858355 Down 1.432408 0.693855 1.094935 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13882_c0_g1_i1 49.82815282 76.68902253 22.9672831 0.299485928 -1.739439877 0.002758581 0.012722636 Down 9.106574 22.42318 15.81459 4.601524 3.690031 3.085272 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13882_c0_g2_i1 1338.455322 2673.965656 2.944988106 0.001101356 -9.826503413 0 0 Down 371.6388 356.0319 325.2594 4.72E-66 0.7211806 0.3020716 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13885_c0_g1_i1 143.4795138 46.9111695 240.0478582 5.11707256 2.355318691 1.27E-23 5.15E-22 Up 7.73622 12.1033 9.679 39.76074 34.50424 47.37205 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13887_c0_g1_i1 48.49995444 20.98569226 76.01421663 3.622192476 1.85686321 1.44E-06 1.35E-05 Up 0.7647841 1.172677 1.367978 3.038073 3.656102 2.972312 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13893_c0_g1_i2 19.39580024 38.79160048 0 0 #NAME? 0.001260291 0.006409186 Down 6.341448 7.982407 0 0 0 0 KRH30385.1 hypothetical protein GLYMA_11G181100 [Glycine max] Q949Q5|PSAO_ARATH Photosystem I subunit O OS=Arabidopsis thaliana OX=3702 GN=PSAO PE=1 SV=1 gmx:100305746 K14332 psaO photosystem I subunit PsaO ko00195 Photosynthesis -- -- -- -- -- S ENOG4112CG2 photosystem i "Cellular Component: chloroplast (GO:0009507);|Cellular Component: photosystem I (GO:0009522);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: thylakoid (GO:0009579);|Biological Process: photosynthetic electron transport chain (GO:0009767);|Biological Process: photosynthesis, light harvesting in photosystem I (GO:0009768);|Cellular Component: integral component of membrane (GO:0016021);" -- -- TRINITY_DN13894_c0_g1_i1 29.5488211 5.482430122 53.61521208 9.779461094 3.289754966 0.015739647 0.055557525 Up 1.218114 0.8511444 1.160045 15.33754 2.390797 7.973333 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13900_c0_g1_i1 22.20592339 7.974505941 36.43734085 4.569228629 2.191950632 0.00016327 0.001034378 Up 0.4482665 0.5069515 0.6256931 2.108699 1.841293 2.057092 KDO37549.1 "hypothetical protein CISIN_1g0482901mg, partial [Citrus sinensis]" Q6JN46|EIX2_SOLLC Receptor-like protein EIX2 OS=Solanum lycopersicum OX=4081 GN=EIX2 PE=1 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF13855.5,PF12799.6,PF00560.32,PF13516.5" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine Rich repeat TRINITY_DN13911_c0_g1_i1 43.55246218 14.90148497 72.20343938 4.845385511 2.276611455 6.07E-08 6.91E-07 Up 0.9370222 0.7595893 1.911287 4.632278 5.522114 4.007127 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13915_c0_g1_i2 61.37097199 0 122.741944 Inf Inf 6.98E-27 3.40E-25 Up 0 0 0 16.55583 22.94698 14.05845 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13919_c0_g1_i1 88.97926605 119.3794316 58.57910047 0.490696761 -1.027096346 0.000204902 0.001271486 Down 4.303476 4.536476 3.76673 1.475332 1.468675 2.080474 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13924_c0_g1_i2 65.27401129 17.63071954 112.917303 6.404577123 2.679103317 1.68E-14 3.73E-13 Up 1.172929 1.952434 2.571613 10.28315 10.89456 8.079965 PIN18174.1 hypothetical protein CDL12_09159 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZQDJ Domain of unknown function (DUF2828) -- PF11443.7 Domain of unknown function (DUF2828) TRINITY_DN13932_c0_g2_i1 6.804436608 1.621857421 11.9870158 7.390918362 2.885753638 0.013630266 0.049347478 Up 0.190429 0.1803409 0.5789728 1.299406 1.486371 2.786892 EYU43294.1 hypothetical protein MIMGU_mgv1a020711mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZD95 DUF584 domain containing protein -- -- -- TRINITY_DN13935_c0_g1_i1 6.632492283 13.26498457 0 0 #NAME? 9.30E-05 0.00062079 Down 1.967534 0.994888 1.722093 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13935_c0_g2_i1 14.86380066 29.72760132 0 0 #NAME? 5.35E-05 0.000376587 Down 1.057341 3.16765 5.165207 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13935_c0_g3_i1 8.685018754 17.37003751 0 0 #NAME? 4.79E-06 4.10E-05 Down 3.267649 3.527185 3.471345 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13935_c0_g4_i1 9.044995584 18.08999117 0 0 #NAME? 2.51E-06 2.26E-05 Down 3.252732 2.699973 4.524022 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13938_c0_g1_i2 63.24312095 88.35826436 38.12797755 0.431515692 -1.212515073 0.019206936 0.065592871 Down 19.49741 16.50535 10.87567 3.145262 3.138356 10.32888 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13941_c0_g1_i2 46.84448077 21.95408436 71.73487718 3.267495743 1.708185356 6.38E-06 5.34E-05 Up 4.236309 3.438428 2.699529 7.076969 10.35455 9.863369 PIN06686.1 hypothetical protein CDL12_20749 [Handroanthus impetiginosus] Q52K95|PCP14_ARATH Precursor of CEP14 OS=Arabidopsis thaliana OX=3702 GN=CEP14 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41118JJ NA Molecular Function: hormone activity (GO:0005179);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: cellular response to nitrogen starvation (GO:0006995);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: response to carbon dioxide (GO:0010037);|Cellular Component: apoplast (GO:0048046);|Biological Process: nitrate import (GO:1902025);|Biological Process: regulation of root development (GO:2000280); -- -- TRINITY_DN13943_c0_g1_i1 10.94695067 20.06690331 1.826998024 0.091045339 -3.457271021 0.002468926 0.011539534 Down 3.968949 1.902384 1.334834 0.2621391 0.2580309 0 XP_011095206.2 putative cyclin-D7-1 [Sesamum indicum] -- -- spen:107030707 K18813 CYCD7 "cyclin D7, plant" -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13953_c0_g1_i1 32.75827473 45.44469093 20.07185853 0.441676643 -1.178937554 0.011771469 0.043630464 Down 3.053333 1.897752 1.73634 0.9143345 0.6837445 0.7746581 XP_011077480.1 probable pectinesterase 15 isoform X1 [Sesamum indicum] Q9ZQA3|PME15_ARATH Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- G COG4677 pectinesterase Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: pectinesterase activity (GO:0030599);|Biological Process: cell wall modification (GO:0042545);|Molecular Function: aspartyl esterase activity (GO:0045330);|Biological Process: pectin catabolic process (GO:0045490); PF01095.18 Pectinesterase TRINITY_DN13954_c0_g1_i3 717.7923751 993.7620374 441.8227128 0.444596087 -1.169432845 5.37E-27 2.63E-25 Down 20.65575 21.65434 20.8782 7.90498 6.86333 7.905351 XP_011098432.1 uncharacterized protein LOC105177098 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZGTH NA -- -- -- TRINITY_DN13957_c0_g1_i3 61.49382818 83.02217561 39.96548076 0.481383202 -1.054742294 0.00184062 0.008946045 Down 5.443398 3.990418 3.795703 1.65484 2.070473 1.402549 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13960_c0_g1_i2 24.573289 47.30903208 1.837545922 0.038841334 -4.686263435 2.12E-11 3.65E-10 Down 2.551796 3.458062 2.583744 0.2581474 0 0 XP_011069700.1 "probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Sesamum indicum]" O82290|SKL2_ARATH "Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SKL2 PE=2 SV=2" -- -- -- -- -- -- -- -- -- -- -- S ENOG410XSXA Shikimate kinase Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: chloroplast (GO:0009507);|Biological Process: phosphorylation (GO:0016310); -- -- TRINITY_DN13964_c0_g1_i2 6.830542437 12.15448981 1.506595062 0.123953789 -3.012125726 0.00914998 0.035390713 Down 0.9463284 1.429707 1.734488 0.2487087 0 0.2569716 XP_011098808.1 protein WVD2-like 7 isoform X3 [Sesamum indicum] Q67Y69|WDL7_ARATH Protein WVD2-like 7 OS=Arabidopsis thaliana OX=3702 GN=WDL7 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YSYI NA Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874); -- -- TRINITY_DN13965_c0_g1_i1 40.67238635 57.45932028 23.88545241 0.415693264 -1.266408724 0.002006922 0.009663752 Down 3.664588 3.219384 3.16149 1.352186 0.7331775 1.348735 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13969_c0_g1_i1 21.59743684 30.28320732 12.91166636 0.426363899 -1.229842806 0.040115738 0.118924615 Down 2.69164 2.59764 1.135279 0.7844607 0.9282758 0.4680683 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13977_c0_g1_i2 150.3816186 231.6513357 69.11190137 0.298344498 -1.744948926 1.72E-15 4.11E-14 Down 26.04158 28.96909 28.48428 5.742766 5.631249 8.809569 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13978_c0_g1_i1 225.7242267 127.5323672 323.9160863 2.539873551 1.344756673 4.41E-14 9.45E-13 Up 8.573024 9.766959 8.117904 20.10502 18.42448 15.51612 EYU31570.1 hypothetical protein MIMGU_mgv1a026142mg [Erythranthe guttata] Q67YM6|DIR11_ARATH Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: apoplast (GO:0048046); PF03018.13 Dirigent-like protein TRINITY_DN13981_c0_g1_i3 36.99695826 64.93803563 9.055880888 0.139454186 -2.842136856 0.006757344 0.027413418 Down 3.824284 14.03242 16.46283 0.000856988 3.884469 2.78E-24 XP_019158513.1 PREDICTED: uncharacterized protein LOC109155282 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z2X5 "CACTA, En Spm sub-class" -- PF02992.13 Transposase family tnp2 TRINITY_DN13997_c0_g1_i1 37.0480158 60.7096384 13.3863932 0.220498648 -2.181158284 1.69E-06 1.56E-05 Down 4.551822 5.088552 3.251216 0.7523038 0.7417683 0.8029705 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13998_c0_g1_i4 6.680580877 13.36116175 0 0 #NAME? 9.71E-05 0.000645277 Down 2.086209 2.857027 1.606958 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13999_c0_g1_i1 34.73925095 51.74001193 17.73848997 0.342838923 -1.544397184 0.00242054 0.01134961 Down 6.646262 5.694163 11.228 1.713192 3.083706 1.678233 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN13_c0_g1_i1 6.314647433 1.56044838 11.06884649 7.093375614 2.826472344 0.013281286 0.048288139 Up 0 0.8315529 0 1.106365 2.578795 1.231342 XP_011100884.1 cytochrome P450 CYP736A12-like [Sesamum indicum] H2DH18|C7A12_PANGI Cytochrome P450 CYP736A12 OS=Panax ginseng OX=4054 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN14002_c0_g1_i1 67.36856358 132.8995812 1.837545922 0.013826574 -6.176412444 5.27E-36 3.66E-34 Down 16.41161 21.826 21.21772 0.5942126 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14002_c0_g2_i1 35.20800592 68.17194109 2.244070747 0.032917806 -4.924987998 1.21E-16 3.17E-15 Down 10.87934 10.17011 10.50648 0 0.3631811 0.3937143 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14009_c0_g1_i2 1912.513262 1238.802858 2586.223667 2.087679771 1.061900434 1.21E-41 1.02E-39 Up 78.37908 83.48509 86.30064 145.9182 137.1334 134.949 XP_012839575.1 "PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic [Erythranthe guttata]" -- -- sind:105155791 K19034 PSRP5 50S ribosomal protein 5 -- -- -- -- -- -- -- S ENOG410ZGCP 50S ribosomal protein 5 -- -- -- TRINITY_DN1400_c0_g1_i1 2.564326842 5.128653685 0 0 #NAME? 0.048056401 0.13719649 Down 1.663085 1.022785 0 0 0 0 KRG97356.1 hypothetical protein GLYMA_18G002800 [Glycine max] O23264|SEBP1_ARATH Selenium-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=SBP1 PE=1 SV=1 gmx:100794235 K17285 SELENBP1 selenium-binding protein 1 -- -- KOG0918 Selenium-binding protein [P] METABOLISM Inorganic ion transport and metabolism S ENOG410XP4F selenium-binding protein Biological Process: sulfate assimilation (GO:0000103);|Cellular Component: cytosol (GO:0005829);|Molecular Function: selenium binding (GO:0008430);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to hydrogen peroxide (GO:0042542);|Biological Process: response to cadmium ion (GO:0046686);|Biological Process: cellular response to selenium ion (GO:0071291); PF05694.10 56kDa selenium binding protein (SBP56) TRINITY_DN1400_c0_g2_i1 4.95908696 9.91817392 0 0 #NAME? 0.014950275 0.053205633 Down 3.447635 2.384132 0 0 0 0 XP_003552370.1 selenium-binding protein 1 [Glycine max] O23264|SEBP1_ARATH Selenium-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=SBP1 PE=1 SV=1 gmx:100794235 K17285 SELENBP1 selenium-binding protein 1 -- -- KOG0918 Selenium-binding protein [P] METABOLISM Inorganic ion transport and metabolism S ENOG410XP4F selenium-binding protein Biological Process: sulfate assimilation (GO:0000103);|Cellular Component: cytosol (GO:0005829);|Molecular Function: selenium binding (GO:0008430);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to hydrogen peroxide (GO:0042542);|Biological Process: response to cadmium ion (GO:0046686);|Biological Process: cellular response to selenium ion (GO:0071291); PF05694.10 56kDa selenium binding protein (SBP56) TRINITY_DN14012_c0_g1_i1 13.00163811 24.55433527 1.448940942 0.059009577 -4.082907069 9.95E-06 8.05E-05 Down 5.135009 2.491019 2.952664 0 0.4755557 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14019_c0_g1_i1 7.461584469 14.92316894 0 0 #NAME? 3.23E-05 0.000237485 Down 2.353141 2.289015 1.402199 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00946.18 Mononegavirales RNA dependent RNA polymerase TRINITY_DN14019_c0_g2_i1 18.87563635 37.7512727 0 0 #NAME? 1.78E-12 3.38E-11 Down 1.20602 1.242146 1.349588 0 0 0 BAN84680.1 Large protein [Rabies viral vector pHEP5.0-delG-mRFP] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00946.18 Mononegavirales RNA dependent RNA polymerase TRINITY_DN14021_c0_g1_i2 7.549818433 15.09963687 0 0 #NAME? 2.14E-05 0.000163172 Down 2.005255 2.016339 3.652851 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14025_c0_g2_i1 11.58920116 17.55890622 5.619496106 0.320036797 -1.643690303 0.035342483 0.107635112 Down 3.35608 2.017454 4.024061 0.5689337 0.5700476 1.222969 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1402_c0_g1_i2 4.938585278 9.877170556 0 0 #NAME? 0.028231621 0.089767299 Down 0.6042033 4.204138 0.9446926 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14030_c0_g1_i1 146.6847905 93.54056789 199.8290131 2.136281804 1.09510197 1.45E-07 1.56E-06 Up 17.31271 15.722 10.27132 24.12148 27.80833 22.75706 PIN10724.1 Stress-induced protein UVI31+ [Handroanthus impetiginosus] Q84W65|SUFE1_ARATH "SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SUFE1 PE=1 SV=2" sind:105168529 K05527 bolA "BolA family transcriptional regulator, general stress-responsive regulator" -- -- KOG2313 Stress-induced protein UVI31+ [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0271 Bola-like protein Cellular Component: mitochondrion (GO:0005739);|Molecular Function: enzyme activator activity (GO:0008047);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570); -- -- TRINITY_DN14036_c0_g1_i2 14.30237622 21.78605903 6.81869342 0.312984253 -1.675838019 0.020151992 0.068235071 Down 4.630619 5.306922 2.870104 0.5362076 0.5413893 2.187803 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14042_c0_g1_i1 79.55734533 119.5374556 39.5772351 0.331086478 -1.594720007 1.32E-07 1.43E-06 Down 11.25108 11.01762 8.605841 2.991726 3.143301 2.13133 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14043_c0_g1_i2 38.91275263 75.58143452 2.244070747 0.029690767 -5.073841837 1.27E-18 3.80E-17 Down 6.050234 4.373687 4.557859 0 0.1781903 0.1775115 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14044_c0_g3_i1 3.237934741 6.475869483 0 0 #NAME? 0.047962779 0.136989519 Down 0.5579441 2.14582 0.2143465 0 0 0 XP_012857113.1 PREDICTED: wiskott-Aldrich syndrome protein family member 2-like [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14044_c0_g4_i1 14.35796441 28.34841964 0.367509184 0.01296401 -6.269344196 1.54E-08 1.90E-07 Down 2.97339 2.6882 2.954285 0.1053069 7.56E-40 8.91E-12 XP_012857113.1 PREDICTED: wiskott-Aldrich syndrome protein family member 2-like [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14046_c0_g1_i1 108.4039831 216.8079662 0 0 #NAME? 2.05E-50 2.27E-48 Down 10.10347 7.121611 8.239891 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14048_c0_g1_i1 27.53202818 44.40629001 10.65776635 0.240005782 -2.058858934 0.006763327 0.027433448 Down 6.301938 8.099322 11.69239 4.994244 3.38E-11 2.89E-84 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14048_c0_g2_i1 36.65986843 51.7432519 21.57648495 0.416991282 -1.261910873 0.028958617 0.091612449 Down 3.557002 2.710827 2.300348 0.5746905 1.968233 0.2948427 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14048_c0_g3_i1 9.526091435 19.05218287 0 0 #NAME? 1.51E-06 1.41E-05 Down 4.827434 2.758134 3.413775 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14048_c0_g4_i1 39.50638449 12.52178814 66.49098084 5.310022828 2.408718063 7.73E-08 8.66E-07 Up 0.6003102 1.152807 2.301775 5.11873 6.325179 5.911902 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14048_c0_g5_i1 20.3503164 5.049081168 35.65155164 7.060997923 2.819872092 0.000517548 0.002912965 Up 0.9943395 0.6237616 0.1188519 3.260751 1.530895 4.563775 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14049_c0_g2_i1 7.575231577 0 15.15046315 Inf Inf 7.57E-06 6.26E-05 Up 0 2.63E-67 0 0.9991142 1.548827 0.8986846 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14057_c1_g1_i1 7.084999505 12.62684562 1.543153387 0.122212105 -3.032540901 0.011778523 0.043642354 Down 0.6917093 2.772313 3.867879 0 0 0.744532 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14068_c0_g1_i3 14.54435692 28.31713716 0.771576693 0.027247694 -5.197722042 9.14E-08 1.01E-06 Down 3.300174 5.346724 3.079301 0 0 0.2230046 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14070_c0_g1_i3 13.73578882 24.49248853 2.979089115 0.121632766 -3.039396179 0.000156441 0.000995976 Down 3.36195 3.912519 3.312948 0.2632381 0.3979244 0.4517902 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14074_c0_g1_i2 27.63278873 2.619535491 52.64604197 20.0974723 4.328942157 3.54E-12 6.52E-11 Up 0.07765968 0 0.2334591 1.954696 1.696451 1.498882 XP_011081934.1 cytochrome P450 71D95-like [Sesamum indicum] Q9XHE7|C71DD_MENPI Cytochrome P450 71D13 OS=Mentha piperita OX=34256 GN=CYP71D13 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: (S)-limonene 3-monooxygenase activity (GO:0018674);|Molecular Function: heme binding (GO:0020037);|Biological Process: oxidation-reduction process (GO:0055114); PF00067.21 Cytochrome P450 TRINITY_DN14076_c0_g1_i1 27.5624013 47.32943776 7.795364835 0.164704362 -2.602049334 5.41E-05 0.000380644 Down 4.947093 11.06487 8.874218 0 2.040871 1.391265 XP_022849203.1 chloride channel protein CLC-e isoform X1 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0475 Cl- channel CLC-3 and related proteins (CLC superfamily) [P] METABOLISM Inorganic ion transport and metabolism -- -- -- -- -- -- TRINITY_DN14078_c0_g2_i1 6.372174 10.83895938 1.905388622 0.175790734 -2.508069069 0.031597409 0.098334099 Down 1.977535 0.8218313 1.304269 0 0.1489701 0.4724882 PSS35035.1 Endonuclease [Actinidia chinensis var. chinensis] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN14079_c1_g1_i1 63.65485156 85.87575224 41.43395088 0.482487196 -1.051437438 0.001365121 0.006876047 Down 5.450839 5.435477 4.284096 1.383639 1.960616 2.563171 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14085_c0_g3_i1 1151.044283 611.5032655 1690.5853 2.764638221 1.467090703 2.53E-14 5.50E-13 Up 93.03032 144.3461 124.0257 259.8579 236.2739 311.3851 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14090_c0_g1_i2 10.82387869 21.64775737 0 0 #NAME? 2.29E-07 2.41E-06 Down 2.250102 3.016027 2.228161 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14090_c0_g2_i1 9.383349632 18.76669926 0 0 #NAME? 1.58E-06 1.47E-05 Down 2.166559 2.408312 3.065637 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14093_c0_g2_i1 10.97128914 17.79030228 4.152276002 0.233401093 -2.099116776 0.012435334 0.045662282 Down 2.410898 1.16606 1.727854 0.414804 0 0.5716833 PIN11942.1 "Chromosome condensation complex Condensin, subunit G [Handroanthus impetiginosus]" -- -- -- -- -- -- -- -- KOG2025 "Chromosome condensation complex Condensin, subunit G" [BD] INFORMATION STORAGE AND PROCESSING|CELLULAR PROCESSES AND SIGNALING "Chromatin structure and dynamics |Cell cycle control, cell division, chromosome partitioning " BD COG5218 Non-SMC condensin I complex subunit G -- PF12719.6 "Nuclear condensing complex subunits, C-term domain" TRINITY_DN14094_c0_g2_i1 15.37063855 22.20280331 8.538473786 0.384567375 -1.378691719 0.042071317 0.123520036 Down 4.120811 2.803837 3.86367 1.068151 1.070027 1.145673 XP_011083922.1 uncharacterized protein LOC105166312 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14095_c0_g3_i1 23.65898709 35.5218406 11.79613359 0.332081148 -1.590392272 0.004043524 0.017659005 Down 2.557088 3.580126 2.724722 0.9096677 1.022498 0.4670339 PIN05336.1 Cl- channel CLC-7 and related proteins (CLC superfamily) [Handroanthus impetiginosus] P60300|CLCG_ARATH Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana OX=3702 GN=CLC-G PE=1 SV=2 sind:105162151 K05016 CLCN7 chloride channel 7 -- -- KOG0474 Cl- channel CLC-7 and related proteins (CLC superfamily) [P] METABOLISM Inorganic ion transport and metabolism P COG0038 chloride channel Molecular Function: voltage-gated chloride channel activity (GO:0005247);|Cellular Component: chloride channel complex (GO:0034707);|Biological Process: regulation of ion transmembrane transport (GO:0034765);|Biological Process: chloride transmembrane transport (GO:1902476); PF00654.19 Voltage gated chloride channel TRINITY_DN14098_c0_g1_i1 10.54685865 17.32722965 3.766487655 0.21737391 -2.201749302 0.035873447 0.10893059 Down 5.8588 4.081493 1.304921 1.018954 0 1.002808 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14098_c0_g3_i1 38.85743738 54.05758151 23.65729325 0.437631366 -1.192211951 0.004458993 0.019221944 Down 2.220453 2.336114 2.384386 0.5437179 1.216826 0.6884589 XP_024464605.1 UDP-xylose transporter 1 isoform X1 [Populus trichocarpa] Q8RXL8|UXT3_ARATH UDP-xylose transporter 3 OS=Arabidopsis thaliana OX=3702 GN=UXT3 PE=1 SV=1 gra:105792402 K15285 SLC35E3 "solute carrier family 35, member E3" -- -- KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [GE] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Amino acid transport and metabolism S ENOG410XP1S solute carrier family 35 member Cellular Component: Golgi membrane (GO:0000139);|Molecular Function: UDP-xylose transmembrane transporter activity (GO:0005464);|Cellular Component: endosome (GO:0005768);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Biological Process: carbohydrate transport (GO:0008643);|Molecular Function: antiporter activity (GO:0015297);|Biological Process: UDP-xylose transmembrane transport (GO:0015790);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN14098_c0_g4_i1 10.32683398 17.30706966 3.3465983 0.193365969 -2.37059418 0.007980696 0.031534446 Down 1.457322 3.709771 1.860081 0.3533641 0.357461 0.3566168 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14099_c0_g1_i2 16.1208483 26.36190897 5.879787632 0.223041041 -2.164618892 0.021356342 0.071418038 Down 1.677679 5.368804 2.577009 0.7355987 0.7395111 0.2604982 XP_019174800.1 PREDICTED: potassium transporter 4-like [Ipomoea nil] Q9LD18|POT4_ARATH Potassium transporter 4 OS=Arabidopsis thaliana OX=3702 GN=POT4 PE=1 SV=2 mdm:103404126 K03549 kup KUP system potassium uptake protein -- -- -- -- -- -- -- P COG3158 Transport of potassium into the cell (By similarity) Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: potassium ion transport (GO:0006813);|Biological Process: cell tip growth (GO:0009932);|Molecular Function: potassium ion transmembrane transporter activity (GO:0015079);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN14104_c0_g1_i1 39.08975626 54.54697969 23.63253283 0.433250988 -1.206725056 0.003635744 0.016120077 Down 4.264808 4.6834 4.005191 0.784436 1.406461 2.390476 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14111_c0_g1_i1 13.95296432 21.26229557 6.643633061 0.312460761 -1.678253067 0.023393936 0.076895073 Down 1.620868 1.810472 1.223178 0.6682415 0.2904102 0.2414503 PIN05529.1 "1,3-beta-glucan synthase [Handroanthus impetiginosus]" Q3B724|CALS5_ARATH Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1 sind:105178085 K11000 CALS callose synthase -- -- KOG0916 "1,3-beta-glucan synthase/callose synthase catalytic subunit" [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis S ENOG410XQ8V synthase "Cellular Component: 1,3-beta-D-glucan synthase complex (GO:0000148);|Molecular Function: 1,3-beta-D-glucan synthase activity (GO:0003843);|Biological Process: (1->3)-beta-D-glucan biosynthetic process (GO:0006075);|Biological Process: regulation of cell shape (GO:0008360);|Biological Process: microsporogenesis (GO:0009556);|Biological Process: pollen germination (GO:0009846);|Biological Process: pollen tube growth (GO:0009860);|Biological Process: pollen wall assembly (GO:0010208);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: cell wall organization (GO:0071555);|Biological Process: regulation of pollen tube growth (GO:0080092);" -- -- TRINITY_DN14111_c0_g2_i1 12.49912509 20.23645263 4.76179755 0.235307919 -2.087378223 0.02574043 0.083162659 Down 3.335851 3.441507 0.9942693 1.128166 0.3681865 0 XP_019184499.1 PREDICTED: callose synthase 5-like [Ipomoea nil] Q3B724|CALS5_ARATH Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1 fve:101295280 K11000 CALS callose synthase -- -- KOG0916 "1,3-beta-glucan synthase/callose synthase catalytic subunit" [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis S ENOG410XQ8V synthase "Cellular Component: 1,3-beta-D-glucan synthase complex (GO:0000148);|Molecular Function: 1,3-beta-D-glucan synthase activity (GO:0003843);|Biological Process: (1->3)-beta-D-glucan biosynthetic process (GO:0006075);|Biological Process: regulation of cell shape (GO:0008360);|Biological Process: microsporogenesis (GO:0009556);|Biological Process: pollen germination (GO:0009846);|Biological Process: pollen tube growth (GO:0009860);|Biological Process: pollen wall assembly (GO:0010208);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: cell wall organization (GO:0071555);|Biological Process: regulation of pollen tube growth (GO:0080092);" -- -- TRINITY_DN14116_c0_g1_i1 20.84076944 41.68153888 0 0 #NAME? 0.001010436 0.005269615 Down 4.159192 4.924124 0 0 0 1.33E-70 XP_003523016.3 "chlorophyll a-b binding protein P4, chloroplastic [Glycine max]" Q9SQL2|CB24_PEA "Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1" gmx:100802922 K08910 LHCA4 light-harvesting complex I chlorophyll a/b binding protein 4 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- S ENOG4110JH3 Chlorophyll a-b binding protein "Cellular Component: photosystem I (GO:0009522);|Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis, light harvesting (GO:0009765);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: metal ion binding (GO:0046872);" PF00504.20 Chlorophyll A-B binding protein TRINITY_DN14117_c0_g1_i2 40.83535682 55.78409354 25.8866201 0.464050206 -1.107647195 0.005660223 0.023548209 Down 6.593844 5.39361 8.281253 4.080267 1.866198 1.624439 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14122_c0_g1_i2 959.4014422 419.0600806 1499.742804 3.578825265 1.839486106 3.28E-75 6.11E-73 Up 60.49768 59.73591 66.70375 172.1828 178.943 188.9618 XP_012836805.1 PREDICTED: uncharacterized protein LOC105957429 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14123_c0_g1_i1 89.2260692 26.74584679 151.7062916 5.672143895 2.503894132 1.34E-17 3.75E-16 Up 1.055021 1.489434 1.433912 6.606942 6.098624 5.501426 XP_022842290.1 uncharacterized protein LOC111365947 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41117GI "function DUF642 (InterPro IPR006946), Galactose-binding like (InterPro IPR008979)" -- PF04862.11 Protein of unknown function (DUF642) TRINITY_DN14126_c0_g1_i1 57.43905502 32.17842808 82.69968196 2.570034862 1.361787929 0.000102002 0.000675667 Up 1.054653 1.13522 1.657498 2.58705 2.900997 2.471937 XP_011080907.1 1-aminocyclopropane-1-carboxylate synthase [Sesamum indicum] P31531|1A1C_SOYBN 1-aminocyclopropane-1-carboxylate synthase OS=Glycine max OX=3847 GN=ACS1 PE=2 SV=1 sind:105164055 K01762 ACS 1-aminocyclopropane-1-carboxylate synthase ko00270 Cysteine and methionine metabolism KOG0256 "1-aminocyclopropane-1-carboxylate synthase, and related proteins" [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms E COG0436 aminotransferase Biological Process: ethylene biosynthetic process (GO:0009693);|Biological Process: fruit ripening (GO:0009835);|Molecular Function: 1-aminocyclopropane-1-carboxylate synthase activity (GO:0016847);|Molecular Function: pyridoxal phosphate binding (GO:0030170); PF00155.20 Aminotransferase class I and II TRINITY_DN14127_c0_g1_i1 47.24510081 94.49020162 0 0 #NAME? 4.40E-30 2.47E-28 Down 6.177712 7.268768 6.647044 0 2.30E-104 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14127_c0_g4_i1 22.48496787 44.96993573 0 0 #NAME? 1.05E-14 2.38E-13 Down 5.807259 3.639114 4.8684 0 0 0 XP_012827447.1 PREDICTED: ABC transporter C family member 12-like isoform X1 [Erythranthe guttata] Q42093|AB2C_ARATH ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 SV=2 -- -- -- -- -- -- KOG0054 "Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1132 (ABC) transporter "Cellular Component: plant-type vacuole (GO:0000325);|Molecular Function: calmodulin binding (GO:0005516);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Molecular Function: xenobiotic transmembrane transporting ATPase activity (GO:0008559);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: transmembrane transport (GO:0055085);|Molecular Function: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity (GO:1902417);|Biological Process: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport (GO:1902418);" -- -- TRINITY_DN14128_c0_g1_i1 10.21166299 16.33643537 4.086890617 0.25017028 -1.999017683 0.024275208 0.079292258 Down 1.222306 2.693843 1.09719 0.5528639 0.2174129 0.3355512 XP_011088030.1 uncharacterized protein LOC105169345 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YIIF NA -- -- -- TRINITY_DN14129_c0_g1_i1 29.57540684 0 59.15081368 Inf Inf 4.27E-21 1.52E-19 Up 0 0 0 5.95094 6.008196 3.907773 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14129_c0_g3_i1 20.40383882 40.80767763 0 0 #NAME? 2.05E-13 4.21E-12 Down 4.739697 4.60666 4.906652 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14130_c0_g1_i1 4.330292688 0.492078091 8.168507286 16.6000223 4.053113274 0.016340008 0.057311232 Up 0 0 0.2437955 2.006286 0.8903965 1.1406 AEI90517.1 "translation elongation factor 1-alpha, partial [Cladosporium cladosporioides]" Q00251|EF1A_AURPU Elongation factor 1-alpha OS=Aureobasidium pullulans OX=5580 GN=TEF1 PE=3 SV=1 pte:PTT_08441 K03231 EEF1A elongation factor 1-alpha ko03013 RNA transport KOG0052 Translation elongation factor EF-1 alpha/Tu [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG5256 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity) Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737); PF00009.26 Elongation factor Tu GTP binding domain TRINITY_DN14138_c0_g1_i1 20.49783743 33.55972863 7.435946233 0.221573491 -2.174142806 0.000432685 0.002483669 Down 1.868755 2.315483 1.315724 0.2185542 0.3907619 0.3805719 PIN20872.1 hypothetical protein CDL12_06428 [Handroanthus impetiginosus] Q1PFD9|TBL31_ARATH Protein trichome birefringence-like 31 OS=Arabidopsis thaliana OX=3702 GN=TBL31 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YERW Pfam:DUF231 Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: O-acetyltransferase activity (GO:0016413);|Biological Process: xylan biosynthetic process (GO:0045492);|Molecular Function: xylan O-acetyltransferase activity (GO:1990538); "PF13839.5,PF14416.5" GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p|PMR5 N terminal Domain TRINITY_DN14143_c0_g1_i1 4189.039694 1131.786119 7246.293268 6.402528839 2.678641846 1.36E-164 7.25E-162 Up 154.4368 133.8112 139.2302 704.4647 704.8349 800.5395 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14148_c0_g1_i2 85.77280611 170.8105939 0.735018369 0.004303119 -7.860401435 5.32E-50 5.85E-48 Down 26.70286 25.41238 21.32304 0.2869722 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14154_c0_g1_i3 15.23062749 5.662418537 24.79883644 4.37954847 2.130782136 0.010975039 0.041077667 Up 1.021095 0.6664247 1.322888 1.720534 5.592723 3.380732 GAK62467.1 12 kDa heat shock protein [Moesziomyces antarcticus] -- -- -- -- -- -- -- -- -- -- -- -- -- O ENOG410ZNFA Heat shock protein 9/12 -- -- -- TRINITY_DN14157_c0_g1_i1 3.202588632 6.405177263 0 0 #NAME? 0.013961586 0.050362227 Down 1.070271 1.713979 1.151613 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14157_c0_g2_i1 7.615595924 14.14448614 1.086705707 0.076828928 -3.702206567 0.002054944 0.009865686 Down 2.725133 3.612583 1.474045 0 0.455852 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14158_c0_g1_i1 23.44576337 38.592608 8.298918738 0.215039075 -2.217329255 0.00514446 0.021704851 Down 7.044911 8.677847 2.962911 0 1.137546 2.228228 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1415_c0_g1_i1 64.11007715 40.77727056 87.44288374 2.144402569 1.100575769 0.003996465 0.017471976 Up 10.18102 6.64858 4.082441 9.909399 10.29228 16.12887 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14161_c0_g2_i1 44.11661911 67.51847576 20.71476246 0.306801394 -1.704623059 2.85E-05 0.000211952 Down 15.91377 12.3179 10.89595 1.662969 5.06996 2.867681 XP_022766212.1 "dynein light chain 1, cytoplasmic-like [Durio zibethinus]" -- -- -- -- -- -- -- -- KOG3430 Dynein light chain type 1 [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton S ENOG4111NK2 "dynein, light chain" -- -- -- TRINITY_DN14162_c0_g1_i2 28.26562408 56.53124816 0 0 #NAME? 6.40E-11 1.04E-09 Down 3.418988 1.622879 1.922681 0 0 0 GAU46010.1 hypothetical protein TSUD_401320 [Trifolium subterraneum] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L ENOG410XP5C Transposase Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN14162_c0_g2_i1 14.97549624 29.95099248 0 0 #NAME? 5.45E-10 7.99E-09 Down 4.289061 2.593987 3.470413 0 0 0 XP_012850949.1 PREDICTED: uncharacterized protein LOC105970659 [Erythranthe guttata] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L ENOG410XP5C Transposase Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN14162_c0_g3_i1 16.99245775 33.9849155 0 0 #NAME? 2.30E-11 3.93E-10 Down 2.716884 3.356619 4.275938 0 0 0 XP_012851415.1 PREDICTED: uncharacterized protein LOC105971114 [Erythranthe guttata] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN14169_c0_g1_i2 59.65067844 25.56353872 93.73781816 3.66685611 1.874543655 0.006756876 0.027413418 Up 4.027966 5.097279 5.266338 8.25118 12.65023 22.18643 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14169_c0_g2_i1 26.62294962 1.722273319 51.52362592 29.9160565 4.902848108 5.08E-07 5.10E-06 Up 0.004604882 6.66E-52 0.9011683 8.363377 10.65805 3.999987 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14170_c0_g1_i2 19.28632812 11.39088771 27.18176854 2.386273067 1.254759143 0.03937453 0.117155746 Up 1.619897 1.146475 1.866162 1.747959 3.430086 3.561757 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14180_c0_g1_i1 109.8889321 193.0050779 26.7727864 0.138715451 -2.849799603 3.69E-25 1.62E-23 Down 17.35694 17.73743 20.54055 2.008831 2.032068 2.195795 XP_011082492.1 monothiol glutaredoxin-S9-like [Sesamum indicum] O82255|GRC13_ARATH Glutaredoxin-C13 OS=Arabidopsis thaliana OX=3702 GN=GRXC13 PE=3 SV=1 sind:105165243 K03676 "grxC, GLRX, GLRX2" glutaredoxin 3 -- -- KOG1752 Glutaredoxin and related proteins [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0695 Glutaredoxin Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: cellular response to nitrogen starvation (GO:0006995);|Molecular Function: electron transfer activity (GO:0009055);|Molecular Function: protein disulfide oxidoreductase activity (GO:0015035);|Biological Process: cell redox homeostasis (GO:0045454); PF00462.23 Glutaredoxin TRINITY_DN14181_c0_g1_i2 29.18571122 54.5500973 3.821325142 0.070051665 -3.835436848 4.22E-11 7.03E-10 Down 8.39608 6.387228 6.889372 0.2122307 0 0.9610025 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14189_c0_g1_i1 11.09621081 17.03710445 5.155317161 0.302593506 -1.724547071 0.039417267 0.117221437 Down 3.359647 3.313336 2.680743 1.10067 0.733762 0.4261429 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14191_c0_g1_i1 123.1466757 74.30447324 171.9888781 2.314650392 1.210794303 1.80E-07 1.92E-06 Up 10.75759 8.786583 8.593073 19.92734 17.5139 15.11916 PIN03279.1 hypothetical protein CDL12_24201 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z2Q7 NA -- -- -- TRINITY_DN14193_c0_g2_i2 3.194636096 6.027036957 0.362235236 0.060101711 -4.056450118 0.049079099 0.139589445 Down 0.6386996 0.911793 0.8859914 0 0.1201065 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14193_c0_g4_i1 15.69643074 31.39286149 0 0 #NAME? 1.92E-10 2.97E-09 Down 1.912199 1.22137 1.564556 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14197_c0_g1_i1 28.78086926 46.06491209 11.49682642 0.24957882 -2.002432584 7.20E-05 0.000492234 Down 6.754719 6.479616 7.422854 1.998882 1.006143 1.109057 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14200_c0_g1_i1 10.38050479 16.30942642 4.451583169 0.272945415 -1.87331563 0.033014491 0.101909653 Down 3.06307 0.8226167 2.070936 0.1688661 0.6748267 0.5165287 XP_011092580.1 B3 domain-containing protein Os01g0234100 isoform X1 [Sesamum indicum] Q0JP99|Y1341_ORYSJ B3 domain-containing protein Os01g0234100 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0234100 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YD7W B3 domain-containing protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634); PF05266.13 Protein of unknown function (DUF724) TRINITY_DN14202_c0_g1_i1 65.31004291 91.53424741 39.08583842 0.427007809 -1.227665642 0.00012164 0.000791631 Down 7.644464 6.141663 7.949394 3.023935 1.852292 2.661062 XP_011094546.1 protein ROS1-like [Sesamum indicum] Q8LK56|DME_ARATH Transcriptional activator DEMETER OS=Arabidopsis thaliana OX=3702 GN=DME PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- L COG0177 endonuclease III "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-(apurinic or apyrimidinic site) endonuclease activity (GO:0003906);|Cellular Component: nucleus (GO:0005634);|Biological Process: base-excision repair (GO:0006284);|Biological Process: DNA methylation (GO:0006306);|Biological Process: regulation of gene expression by genetic imprinting (GO:0006349);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Molecular Function: DNA N-glycosylase activity (GO:0019104);|Cellular Component: polar nucleus (GO:0043078);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);" -- -- TRINITY_DN14207_c1_g1_i2 44.55184095 84.73048934 4.37319257 0.051612974 -4.276122418 5.83E-18 1.68E-16 Down 2.807349 2.589869 2.541003 0.1362938 0.1888574 0 XP_011090522.1 NDR1/HIN1-like protein 13 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14209_c0_g1_i1 51.45699019 0.624179352 102.289801 163.8788606 7.356485957 2.69E-28 1.40E-26 Up 0 0.2208379 0 9.778539 7.191873 6.458895 XP_011084685.1 protein HEADING DATE 3A [Sesamum indicum] Q93WI9|HD3A_ORYSJ Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV=1 sind:105166880 K16223 FT protein FLOWERING LOCUS T ko04712 Circadian rhythm - plant KOG3346 Phosphatidylethanolamine binding protein [R] POORLY CHARACTERIZED General function prediction only S COG1881 phosphatidylethanolamine-binding protein "Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: phosphatidylethanolamine binding (GO:0008429);|Biological Process: flower development (GO:0009908);|Biological Process: regulation of flower development (GO:0009909);|Biological Process: inflorescence development (GO:0010229);|Biological Process: cell differentiation (GO:0030154);|Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);|Biological Process: short-day photoperiodism (GO:0048572);|Biological Process: short-day photoperiodism, flowering (GO:0048575);" -- -- TRINITY_DN14210_c0_g1_i1 120.9657158 185.6382342 56.29319744 0.303241397 -1.721461379 2.06E-12 3.87E-11 Down 8.484019 10.42009 8.248241 2.076675 1.934781 2.627123 PWA49979.1 hypothetical protein CTI12_AA470010 [Artemisia annua] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14223_c0_g1_i3 102.7034463 32.61881801 172.7880746 5.297189939 2.40522724 4.83E-19 1.49E-17 Up 4.539561 4.47562 3.524933 19.89429 15.95028 17.5888 PIN02838.1 hypothetical protein CDL12_24645 [Handroanthus impetiginosus] P47926|RSI1_SOLLC Protein RSI-1 OS=Solanum lycopersicum OX=4081 GN=RSI-1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG41116UK Gibberellin regulated protein Cellular Component: extracellular region (GO:0005576); PF02704.13 Gibberellin regulated protein TRINITY_DN14224_c0_g1_i1 23.05962884 33.50480049 12.61445719 0.376497009 -1.409289689 0.009205329 0.035571422 Down 2.018771 3.37427 3.664487 0.2712672 1.469906 0.9931686 PIN05746.1 "Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Handroanthus impetiginosus]" Q9M439|BCAT2_ARATH "Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCAT2 PE=1 SV=1" sind:105162194 K00826 "E2.6.1.42, ilvE" branched-chain amino acid aminotransferase ko00290|ko00770|ko00280|ko00270 "Valine, leucine and isoleucine biosynthesis|Pantothenate and CoA biosynthesis|Valine, leucine and isoleucine degradation|Cysteine and methionine metabolism" KOG0975 "Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily" [E] METABOLISM Amino acid transport and metabolism E COG0115 brancheD-chain amino acid aminotransferase Molecular Function: branched-chain-amino-acid transaminase activity (GO:0004084);|Biological Process: isoleucine biosynthetic process (GO:0009097);|Biological Process: leucine biosynthetic process (GO:0009098);|Biological Process: valine biosynthetic process (GO:0009099);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: L-leucine transaminase activity (GO:0052654);|Molecular Function: L-valine transaminase activity (GO:0052655);|Molecular Function: L-isoleucine transaminase activity (GO:0052656);|Biological Process: plant-type cell wall organization or biogenesis (GO:0071669); PF01063.18 Amino-transferase class IV TRINITY_DN14228_c1_g2_i1 3.385677243 6.771354487 0 0 #NAME? 0.01094485 0.040986851 Down 1.190224 0.8149545 0.7787309 0 0 0 OMO79377.1 reverse transcriptase [Corchorus capsularis] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 nnu:104602841 K13024 "PPIP5K, VIP" inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase ko04070 Phosphatidylinositol signaling system KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN14236_c0_g1_i2 162.5591852 325.1183705 0 0 #NAME? 1.95E-05 0.000149827 Down 45.77323 41.52353 0 0 0 0 NP_001241137.1 "ribulose bisphosphate carboxylase small chain 4, chloroplastic [Glycine max]" P00865|RBS1_SOYBN "Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max OX=3847 GN=RBCS-1 PE=3 SV=1" gmx:100794277 K01602 rbcS ribulose-bisphosphate carboxylase small chain ko00710|ko00630 Carbon fixation in photosynthetic organisms|Glyoxylate and dicarboxylate metabolism -- -- -- -- -- C COG4451 "RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site" Molecular Function: monooxygenase activity (GO:0004497);|Cellular Component: chloroplast (GO:0009507);|Biological Process: photorespiration (GO:0009853);|Molecular Function: ribulose-bisphosphate carboxylase activity (GO:0016984);|Biological Process: reductive pentose-phosphate cycle (GO:0019253); "PF00101.19,PF12338.7" "Ribulose bisphosphate carboxylase, small chain|Ribulose-1,5-bisphosphate carboxylase small subunit" TRINITY_DN14243_c0_g1_i1 33.11839514 44.63232626 21.60446402 0.484054178 -1.046759563 0.020978744 0.070425095 Down 1.864877 2.290842 1.833591 0.7591678 0.6956249 0.9111219 XP_011073713.1 uncharacterized protein LOC105158577 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4110MH1 Glycosyl transferases group 1 -- "PF13439.5,PF00534.19,PF13692.5,PF13579.5" Glycosyltransferase Family 4|Glycosyl transferases group 1|Glycosyl transferases group 1|Glycosyl transferase 4-like domain TRINITY_DN14246_c0_g2_i1 31.06377428 46.16613375 15.96141481 0.345738608 -1.53224638 0.02092853 0.070282516 Down 4.985885 9.980649 4.131326 1.779384 1.743733 1.73996 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14248_c0_g1_i2 45.04876575 24.04717649 66.05035501 2.746698975 1.457698807 0.000124758 0.000810641 Up 3.412363 2.620986 2.078569 5.654936 6.573084 5.740573 PIN21864.1 hypothetical protein CDL12_05433 [Handroanthus impetiginosus] Q9LZM4|WAKLQ_ARATH Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana OX=3702 GN=WAKL20 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- PF13947.5 Wall-associated receptor kinase galacturonan-binding TRINITY_DN14251_c0_g1_i1 89.09625031 56.40979687 121.7827037 2.15889279 1.110291601 6.35E-05 0.000438973 Up 3.998867 5.605047 5.674333 8.934298 9.064416 8.609707 PIN12133.1 Transcription factor MBF1 [Handroanthus impetiginosus] Q9SJI8|MBF1A_ARATH Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1 sind:105165448 K03627 MBF1 putative transcription factor -- -- KOG3398 Transcription factor MBF1 [K] INFORMATION STORAGE AND PROCESSING Transcription K COG1813 Factor 1 "Molecular Function: transcription coactivator activity (GO:0003713);|Molecular Function: mRNA binding (GO:0003729);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);" "PF08523.9,PF01381.21" Multiprotein bridging factor 1|Helix-turn-helix TRINITY_DN14252_c0_g1_i1 338.7835045 510.7497586 166.8172505 0.32661249 -1.614348132 1.97E-12 3.71E-11 Down 101.9019 101.3245 75.24234 29.43139 20.38128 23.49372 AXL65958.1 "1-deoxy-D-xylulose 5-phosphate synthase, partial [synthetic construct]" O78328|DXS_CAPAN "Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 GN=TKT2 PE=2 SV=1" jcu:105628480 K01662 dxs 1-deoxy-D-xylulose-5-phosphate synthase ko00730|ko00900 Thiamine metabolism|Terpenoid backbone biosynthesis KOG0523 Transketolase [G] METABOLISM Carbohydrate transport and metabolism H COG1154 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (By similarity) Molecular Function: 1-deoxy-D-xylulose-5-phosphate synthase activity (GO:0008661);|Biological Process: thiamine biosynthetic process (GO:0009228);|Cellular Component: chloroplast (GO:0009507);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: 1-deoxy-D-xylulose 5-phosphate biosynthetic process (GO:0052865); "PF02780.19,PF02779.23" "Transketolase, C-terminal domain|Transketolase, pyrimidine binding domain" TRINITY_DN14255_c0_g1_i1 18.86752978 27.67171154 10.06334801 0.363669157 -1.45930152 0.016360822 0.057370936 Down 1.931555 1.48372 1.955439 0.5251298 0.453258 0.60472 XP_011075404.1 condensin complex subunit 1 [Sesamum indicum] Q06156|CND1_YEAST Condensin complex subunit 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YCS4 PE=1 SV=1 -- -- -- -- -- -- KOG0414 "Chromosome condensation complex Condensin, subunit D2" [BD] INFORMATION STORAGE AND PROCESSING|CELLULAR PROCESSES AND SIGNALING "Chromatin structure and dynamics |Cell cycle control, cell division, chromosome partitioning " BD COG5098 "Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity)" "Biological Process: mitotic sister chromatid segregation (GO:0000070);|Cellular Component: condensed chromosome, centromeric region (GO:0000779);|Cellular Component: nuclear condensin complex (GO:0000799);|Molecular Function: chromatin binding (GO:0003682);|Cellular Component: nucleolus (GO:0005730);|Biological Process: mitotic chromosome condensation (GO:0007076);|Biological Process: synaptonemal complex assembly (GO:0007130);|Biological Process: meiotic chromosome condensation (GO:0010032);|Biological Process: chromatin silencing at silent mating-type cassette (GO:0030466);|Molecular Function: histone binding (GO:0042393);|Biological Process: maintenance of rDNA (GO:0043007);|Biological Process: cell division (GO:0051301);|Biological Process: chromosome separation (GO:0051304);|Biological Process: meiotic chromosome separation (GO:0051307);|Biological Process: tRNA gene clustering (GO:0070058);|Biological Process: negative regulation of meiotic DNA double-strand break formation (GO:1903342);" PF12717.6 non-SMC mitotic condensation complex subunit 1 TRINITY_DN14262_c0_g1_i1 70.36372472 45.67409048 95.05335895 2.081122097 1.057361609 0.000435191 0.002495845 Up 3.940986 3.917014 2.636313 6.022838 4.773399 6.849276 EYU35851.1 hypothetical protein MIMGU_mgv1a011313mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF04043.14 Plant invertase/pectin methylesterase inhibitor TRINITY_DN14264_c0_g1_i2 25.52699767 15.39596245 35.65803289 2.316063903 1.21167506 0.014096314 0.050715223 Up 2.033327 0.9948472 0.7809977 2.796052 2.072037 2.238783 XP_011082563.1 "ent-copalyl diphosphate synthase, chloroplastic isoform X1 [Sesamum indicum]" Q38802|KSA_ARATH "Ent-copalyl diphosphate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GA1 PE=1 SV=1" sind:105165295 K04120 E5.5.1.13 ent-copalyl diphosphate synthase ko00904 Diterpenoid biosynthesis -- -- -- -- -- I ENOG410XNXR diphosphate synthase Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: chloroplast (GO:0009507);|Biological Process: gibberellin biosynthetic process (GO:0009686);|Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);|Molecular Function: ent-copalyl diphosphate synthase activity (GO:0009905);|Molecular Function: terpene synthase activity (GO:0010333);|Biological Process: diterpenoid biosynthetic process (GO:0016102); PF01397.20 "Terpene synthase, N-terminal domain" TRINITY_DN14264_c2_g1_i1 85.62344855 142.6548439 28.59205316 0.200428197 -2.318842609 1.17E-14 2.62E-13 Down 3.900827 3.643154 3.564374 0.6906009 0.553478 0.5657182 EYU40922.1 "hypothetical protein MIMGU_mgv1a023046mg, partial [Erythranthe guttata]" O04408|KSA_PEA "Ent-copalyl diphosphate synthase, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1" sind:105165295 K04120 E5.5.1.13 ent-copalyl diphosphate synthase ko00904 Diterpenoid biosynthesis -- -- -- -- -- I ENOG410XNXR diphosphate synthase Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: chloroplast (GO:0009507);|Biological Process: gibberellin biosynthetic process (GO:0009686);|Molecular Function: ent-copalyl diphosphate synthase activity (GO:0009905);|Molecular Function: terpene synthase activity (GO:0010333); "PF01397.20,PF03936.15" "Terpene synthase, N-terminal domain|Terpene synthase family, metal binding domain" TRINITY_DN14265_c0_g1_i1 62.91238584 125.8247717 0 0 #NAME? 1.17E-39 9.26E-38 Down 3.422647 3.053699 3.172321 0 0 0 PNY00673.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN14271_c0_g1_i2 22.81523018 31.9683131 13.66214725 0.427365285 -1.226458371 0.021953953 0.073018448 Down 2.439256 1.635834 3.585496 0.6519397 1.304783 0.7070155 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14275_c0_g1_i1 3613.119485 6993.460131 232.778839 0.033285217 -4.90897461 0 0 Down 650.4275 668.8967 686.915 17.58392 17.42991 18.9385 XP_012855601.1 PREDICTED: miraculin-like [Erythranthe guttata] P13087|MIRA_SYNDU Miraculin OS=Synsepalum dulcificum OX=3743 PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00197.17 Trypsin and protease inhibitor TRINITY_DN1427_c0_g1_i1 6.020276013 12.04055203 0 0 #NAME? 0.000222249 0.001365347 Down 1.709106 2.783908 2.68932 0 0 0 XP_019107055.1 PREDICTED: G2/mitotic-specific cyclin S13-7 isoform X2 [Beta vulgaris subsp. vulgaris] P25011|CCNB1_SOYBN G2/mitotic-specific cyclin S13-6 OS=Glycine max OX=3847 PE=2 SV=1 -- -- -- -- -- -- KOG0653 Cyclin B and related kinase-activating proteins [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D COG5024 g2 mitotic-specific Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);|Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: cyclin-dependent protein kinase holoenzyme complex (GO:0000307);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: regulation of mitotic nuclear division (GO:0007088);|Biological Process: positive regulation of cell proliferation (GO:0008284);|Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);|Molecular Function: protein kinase binding (GO:0019901);|Biological Process: positive regulation of cell cycle (GO:0045787);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN14282_c0_g1_i1 25.11082007 9.283152586 40.93848755 4.409976802 2.140771067 5.41E-05 0.000380466 Up 1.793827 0.8618419 0.7843388 3.572988 4.065716 4.554878 XP_022871411.1 ethylene-responsive transcription factor 1B-like [Olea europaea var. sylvestris] Q8LDC8|ERF92_ARATH Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2 gra:105775839 K14516 ERF1 ethylene-responsive transcription factor 1 ko04075 Plant hormone signal transduction -- -- -- -- -- K ENOG410YJNR Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: defense response (GO:0006952);|Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);|Biological Process: ethylene-activated signaling pathway (GO:0009873); PF00847.19 AP2 domain TRINITY_DN14283_c0_g1_i3 22.42084948 31.45003182 13.39166715 0.425807746 -1.231725902 0.028643299 0.090847212 Down 2.64271 2.262976 1.992927 0.8385624 0.7342955 0.862725 PIN21921.1 hypothetical protein CDL12_05375 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14283_c0_g2_i1 31.26219955 50.884156 11.64024309 0.228759677 -2.128095322 1.08E-05 8.69E-05 Down 4.663611 3.809353 4.993489 0.1804899 0.8980665 1.380798 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14290_c0_g1_i2 87.8682659 53.5785876 122.1579442 2.27997694 1.189019233 2.12E-05 0.000161772 Up 2.366202 3.460201 3.417237 5.54292 5.81516 5.560258 PIN15941.1 hypothetical protein CDL12_11394 [Handroanthus impetiginosus] Q9ZV89|TBL42_ARATH Protein trichome birefringence-like 42 OS=Arabidopsis thaliana OX=3702 GN=TBL42 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG411157M Pfam:DUF231 Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: O-acetyltransferase activity (GO:0016413); "PF13839.5,PF14416.5" GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p|PMR5 N terminal Domain TRINITY_DN14297_c0_g1_i2 21.95336614 43.90673227 0 0 #NAME? 0.000925069 0.004868032 Down 5.205298 6.095006 0 0 0 0 NP_001347300.1 "chlorophyll a-b binding protein CP26, chloroplastic [Glycine max]" Q9XF89|CB5_ARATH "Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB5 PE=1 SV=1" gmx:100806585 K08916 LHCB5 light-harvesting complex II chlorophyll a/b binding protein 5 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- S ENOG41110WY Chlorophyll A-B binding protein "Biological Process: response to light stimulus (GO:0009416);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: PSII associated light-harvesting complex II (GO:0009517);|Cellular Component: photosystem I (GO:0009522);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: thylakoid (GO:0009579);|Biological Process: response to blue light (GO:0009637);|Biological Process: photosynthesis, light harvesting in photosystem I (GO:0009768);|Cellular Component: photosystem II antenna complex (GO:0009783);|Biological Process: response to red light (GO:0010114);|Biological Process: nonphotochemical quenching (GO:0010196);|Biological Process: photosystem II assembly (GO:0010207);|Biological Process: response to far red light (GO:0010218);|Cellular Component: plastoglobule (GO:0010287);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: protein domain specific binding (GO:0019904);|Cellular Component: thylakoid membrane (GO:0042651);|Molecular Function: metal ion binding (GO:0046872);" PF00504.20 Chlorophyll A-B binding protein TRINITY_DN14298_c0_g1_i1 34.91721486 18.6234755 51.21095422 2.749806512 1.459330108 0.007439072 0.029715047 Up 4.443044 3.200603 1.42684 6.603047 9.293886 3.929813 XP_012845043.1 PREDICTED: RING-H2 finger protein ATL40-like [Erythranthe guttata] Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1 sly:101259348 K19038 ATL41 E3 ubiquitin-protein ligase ATL41 -- -- -- -- -- -- -- O ENOG41121N2 zinc ion binding Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN14298_c0_g2_i1 17.0271347 4.120133633 29.93413576 7.265331278 2.861028582 0.000214722 0.001326288 Up 0.6891727 0.3346666 0.3844071 4.194769 2.459977 1.731727 PIN00042.1 hypothetical protein CDL12_27454 [Handroanthus impetiginosus] Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1 sind:105176819 K19038 ATL41 E3 ubiquitin-protein ligase ATL41 -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transferase activity (GO:0016740);|Molecular Function: metal ion binding (GO:0046872); "PF13639.5,PF17123.4,PF13923.5,PF12678.6,PF14634.5,PF00097.24,PF13445.5,PF14447.5,PF13920.5" "Ring finger domain|RING-like zinc finger|Zinc finger, C3HC4 type (RING finger)|RING-H2 zinc finger domain|zinc-RING finger domain|Zinc finger, C3HC4 type (RING finger)|RING-type zinc-finger|Prokaryotic RING finger family 4|Zinc finger, C3HC4 type (RING finger)" TRINITY_DN14307_c1_g1_i1 39.16393203 19.15103996 59.1768241 3.090005776 1.627609535 9.48E-05 0.000631508 Up 1.02265 0.9840878 0.9837895 2.608622 2.860174 1.898334 XP_022868431.1 elongation of fatty acids protein 3-like [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG3071 Fatty acyl-CoA elongase/Polyunsaturated fatty acid specific elongation enzyme [I] METABOLISM Lipid transport and metabolism I ENOG410XRWT elongation of very long chain fatty acids protein -- -- -- TRINITY_DN14309_c0_g1_i2 8.91691212 14.49249989 3.341324351 0.230555417 -2.116814534 0.027388658 0.087569584 Down 2.773206 1.930286 1.793712 0.2691415 0.5379043 0.4677403 XP_012835371.1 PREDICTED: basic form of pathogenesis-related protein 1-like [Erythranthe guttata] P11670|PRB1_TOBAC Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1 -- -- -- -- -- -- KOG3017 Defense-related protein containing SCP domain [S] POORLY CHARACTERIZED Function unknown S COG2340 Scp-like extracellular Cellular Component: extracellular region (GO:0005576);|Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607); PF00188.25 Cysteine-rich secretory protein family TRINITY_DN14311_c0_g1_i2 22.94650663 32.16266399 13.73034927 0.426903358 -1.228018583 0.026782044 0.085940713 Down 2.396323 1.638298 1.818433 0.6785652 0.673115 0.6430226 XP_011080287.1 origin of replication complex subunit 1A [Sesamum indicum] Q710E8|ORC1A_ARATH Origin of replication complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=ORC1A PE=1 SV=1 -- -- -- -- -- -- KOG1514 "Origin recognition complex, subunit 1, and related proteins" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG1474 Involved in regulation of DNA replication (By similarity) "Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: nuclear chromosome, telomeric region (GO:0000784);|Cellular Component: origin recognition complex (GO:0000808);|Molecular Function: chromatin binding (GO:0003682);|Molecular Function: DNA replication origin binding (GO:0003688);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nuclear origin of replication recognition complex (GO:0005664);|Biological Process: DNA replication (GO:0006260);|Biological Process: DNA replication initiation (GO:0006270);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: double-stranded methylated DNA binding (GO:0010385);|Biological Process: mitotic DNA replication checkpoint (GO:0033314);|Molecular Function: metal ion binding (GO:0046872);" PF00004.28 ATPase family associated with various cellular activities (AAA) TRINITY_DN14314_c0_g1_i1 34.88956765 47.29466961 22.48446568 0.475412258 -1.072748992 0.013105739 0.047780002 Down 2.278587 3.455959 4.058725 1.238084 1.707729 0.7624808 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14319_c0_g1_i2 104.8944617 57.40526756 152.3836559 2.65452392 1.408453142 3.25E-08 3.85E-07 Up 5.994985 3.04125 4.883292 10.81016 10.25832 8.863143 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14322_c0_g1_i2 174.5372475 243.2547726 105.8197223 0.435016017 -1.200859574 2.02E-09 2.78E-08 Down 24.97086 23.55483 23.50506 7.390762 7.968021 9.881186 PIN19617.1 Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [Handroanthus impetiginosus] Q9FIT9|HS217_ARATH 21.7 kDa class VI heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP21.7 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YHRU kDa class VI heat shock Cellular Component: cytoplasm (GO:0005737); PF00011.20 Hsp20/alpha crystallin family TRINITY_DN14325_c0_g1_i1 25.9429747 35.54156288 16.34438652 0.459866849 -1.120711896 0.031566256 0.09825736 Down 3.066425 3.585797 2.613401 0.7768789 1.397044 1.212802 XP_012847056.1 PREDICTED: uncharacterized protein LOC105967041 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHH8 NA -- -- -- TRINITY_DN14328_c0_g5_i1 15.09305856 7.570880665 22.61523645 2.987134185 1.578762046 0.024357915 0.079545239 Up 1.705701 0.4282557 2.065508 2.894862 3.934111 3.16611 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14331_c0_g1_i1 9.518551089 19.03710218 0 0 #NAME? 1.52E-06 1.42E-05 Down 2.335625 2.537679 2.020296 0 0 0 PNX61902.1 "retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Trifolium pratense]" P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN14333_c1_g1_i1 20.89591815 30.96991681 10.82191949 0.349433276 -1.516911094 0.009955838 0.037922744 Down 2.390459 2.686068 1.872873 0.7387241 0.4279377 0.7741286 PIN01392.1 hypothetical protein CDL12_26103 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YQM1 Protein of unknown function (DUF1645) -- PF07816.10 Protein of unknown function (DUF1645) TRINITY_DN1433_c0_g1_i1 17.58238078 27.78365282 7.381108746 0.265663727 -1.912326838 0.003248889 0.014627736 Down 1.397436 3.337984 3.768677 0.7475133 0.7344203 0.3652895 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14355_c0_g1_i4 200.5770211 122.889626 278.2644161 2.264344234 1.179093299 2.16E-05 0.000164677 Up 12.51723 11.48112 12.75325 20.38589 28.06157 18.62446 XP_011094390.1 60S acidic ribosomal protein P2-1 [Sesamum indicum] P41099|RLA2_PARAR 60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1 sind:105174098 K02943 "RP-LP2, RPLP2" large subunit ribosomal protein LP2 ko03010 Ribosome KOG3449 60S acidic ribosomal protein P2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2058 Ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translational elongation (GO:0006414); PF00428.18 60s Acidic ribosomal protein TRINITY_DN14356_c0_g1_i1 26.22764505 37.4457863 15.0095038 0.400832918 -1.3189271 0.019812341 0.067290804 Down 4.253153 5.904119 3.104245 2.168067 1.898019 0.2485342 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14359_c0_g1_i1 256.814247 506.9824036 6.646090377 0.013109114 -6.253285953 1.45E-126 4.95E-124 Down 32.49308 34.23544 28.88383 0.3353632 0.4448654 0.2387582 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14359_c0_g2_i2 27.91670999 54.36338325 1.470036737 0.027040935 -5.208711129 0.002176982 0.010355205 Down 10.24641 2.433642 19.05042 0.6567354 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14367_c0_g1_i2 150.7406685 87.06762401 214.4137129 2.462611279 1.300188918 1.14E-09 1.61E-08 Up 7.775536 9.9168 9.051054 18.47719 19.7778 14.8166 PIN07292.1 hypothetical protein CDL12_20147 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- PF07939.10 Protein of unknown function (DUF1685) TRINITY_DN14376_c0_g1_i1 729.9456693 0 1459.891339 Inf Inf 0 0 Up 0 0 0 119.6139 124.0198 125.3143 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14377_c0_g1_i1 7.701891865 2.838530762 12.56525297 4.426674931 2.146223434 0.045711466 0.131920693 Up 0 0.3480928 1.107355 2.265524 1.597567 1.073266 XP_020551098.1 putative pentatricopeptide repeat-containing protein At1g19290 isoform X2 [Sesamum indicum] Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana OX=3702 GN=At1g19290 PE=3 SV=2 sind:105166185 K17964 LRPPRC "leucine-rich PPR motif-containing protein, mitochondrial" -- -- -- -- -- -- -- S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN14382_c0_g1_i1 169.3097565 88.22052374 250.3989894 2.838330342 1.505042509 5.61E-07 5.60E-06 Up 7.433288 7.485424 10.6556 21.86632 21.84105 14.90334 XP_022897293.1 heavy metal-associated isoprenylated plant protein 2-like [Olea europaea var. sylvestris] Q9SFF7|HIP43_ARATH Heavy metal-associated isoprenylated plant protein 43 OS=Arabidopsis thaliana OX=3702 GN=HIPP43 PE=2 SV=1 -- -- -- -- -- -- KOG1603 Copper chaperone [P] METABOLISM Inorganic ion transport and metabolism S COG2608 heavy metal transport detoxification protein Biological Process: metal ion transport (GO:0030001);|Molecular Function: metal ion binding (GO:0046872); PF00403.25 Heavy-metal-associated domain TRINITY_DN14385_c0_g1_i1 34.0330122 67.70378916 0.362235236 0.005350295 -7.546165881 1.85E-20 6.22E-19 Down 3.033081 3.702127 3.189182 0 0.04280626 0 XP_019156926.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Ipomoea nil] P08770|TRA1_MAIZE Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG410YEFW Pfam:hATC Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: transposition (GO:0032196);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN14387_c0_g1_i1 272.2816584 542.3192461 2.244070747 0.004137915 -7.916880401 2.72E-149 1.22E-146 Down 37.48474 36.10467 33.75023 0 0.1540702 0.1620904 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14388_c0_g1_i1 14.05800115 5.195825416 22.92017688 4.411267709 2.141193317 0.003242626 0.014605332 Up 0.2640127 0.6772861 0.4589287 2.011192 1.8076 1.147747 PIN01528.1 hypothetical protein CDL12_25964 [Handroanthus impetiginosus] Q9SGS5|Y1607_ARATH Uncharacterized protein At1g76070 OS=Arabidopsis thaliana OX=3702 GN=At1g76070 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YQZK NA Cellular Component: plasma membrane (GO:0005886); -- -- TRINITY_DN14397_c0_g1_i2 21.09146749 42.18293497 0 0 #NAME? 0.001163464 0.005966234 Down 3.579399 2.800137 4.62E-62 0 0 0 KRH31002.1 hypothetical protein GLYMA_11G221000 [Glycine max] O98997|RCA_VIGRR "Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=RCA PE=2 SV=2" -- -- -- -- -- -- KOG0651 "26S proteasome regulatory complex, ATPase RPT4" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG1222 26S protease regulatory subunit Molecular Function: ATP binding (GO:0005524);|Cellular Component: chloroplast stroma (GO:0009570); PF00004.28 ATPase family associated with various cellular activities (AAA) TRINITY_DN14418_c0_g1_i1 86.75178229 15.43256992 158.0709947 10.24268774 3.356522431 1.17E-25 5.28E-24 Up 0.9537552 1.228017 2.512264 13.51921 13.40907 12.28158 PIN08414.1 hypothetical protein CDL12_19015 [Handroanthus impetiginosus] O50001|PRU1_PRUAR Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YZ38 Pathogenesis-related protein Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607); PF00407.18 Pathogenesis-related protein Bet v I family TRINITY_DN14421_c0_g2_i2 105.520846 184.9982907 26.04340129 0.140776443 -2.828522158 1.41E-23 5.69E-22 Down 6.972817 7.912842 5.901191 1.060397 0.5249072 0.7692478 EYU26264.1 hypothetical protein MIMGU_mgv1a004586mg [Erythranthe guttata] Q9LUC5|C7A15_ARATH Cytochrome P450 72A15 OS=Arabidopsis thaliana OX=3702 GN=CYP72A15 PE=2 SV=1 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN14424_c0_g1_i2 26.68179482 36.60177109 16.76181856 0.457951024 -1.126734778 0.023209471 0.076404927 Down 2.852751 3.596985 3.987149 1.328763 1.060417 1.412002 XP_011069795.1 uncharacterized protein LOC105155598 isoform X2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111E32 NA -- -- -- TRINITY_DN14426_c0_g2_i1 7.795904212 12.62572452 2.966083902 0.234923857 -2.089734866 0.039308984 0.117006737 Down 2.253863 2.576577 2.867787 0.7661663 0.3967646 0.4170735 KYP69041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN14428_c0_g1_i2 37.22671142 68.24795829 6.205464543 0.090925277 -3.459174767 4.10E-12 7.50E-11 Down 7.719273 12.87277 10.99225 1.157898 1.12737 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14432_c0_g1_i1 82.60743588 52.05958029 113.1552915 2.173572873 1.120068465 6.70E-05 0.000461283 Up 5.638628 3.327954 4.118183 7.676068 7.967101 7.140051 PIM99072.1 Glyoxalase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XW6K Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily -- "PF00903.24,PF13669.5" Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily|Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TRINITY_DN14433_c0_g2_i1 831.3835397 472.2704596 1190.49662 2.520794167 1.333878321 1.82E-24 7.70E-23 Up 62.71577 75.83563 77.06804 147.8083 130.2663 160.9643 XP_015889056.1 40S ribosomal protein S29-like [Ziziphus jujuba] Q680P8|RS29_ARATH 40S ribosomal protein S29 OS=Arabidopsis thaliana OX=3702 GN=RPS29A PE=3 SV=2 vvi:100241311 K02980 "RP-S29e, RPS29" small subunit ribosomal protein S29e ko03010 Ribosome KOG3506 40S ribosomal protein S29 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0199 "Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); -- -- TRINITY_DN14434_c0_g1_i1 13.59671047 20.49249307 6.700927864 0.326994273 -1.612662729 0.028961462 0.091612449 Down 1.429783 1.482097 1.221791 0.1478333 0.4892927 0.4723826 XP_011077893.1 growth-regulating factor 3 [Sesamum indicum] Q9SJR5|GRF3_ARATH Growth-regulating factor 3 OS=Arabidopsis thaliana OX=3702 GN=GRF3 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410Y9TR growth-regulating factor "Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: transcription, DNA-templated (GO:0006351);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: negative regulation of cell proliferation (GO:0008285);|Biological Process: response to nematode (GO:0009624);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: root development (GO:0048364);|Biological Process: regulation of nematode larval development (GO:0061062);" "PF08879.9,PF08880.10" WRC|QLQ TRINITY_DN14436_c0_g1_i1 23.01030568 34.90429934 11.11631203 0.318479736 -1.650726516 0.003847495 0.016920109 Down 5.115073 3.830862 2.819348 1.571599 0.6969636 0.7478592 XP_012839019.1 PREDICTED: guanosine nucleotide diphosphate dissociation inhibitor 2-like [Erythranthe guttata] Q9LXC0|GDI_ARATH Guanosine nucleotide diphosphate dissociation inhibitor At5g09550 OS=Arabidopsis thaliana OX=3702 GN=At5g09550 PE=3 SV=1 sind:105158839 K17255 GDI1_2 Rab GDP dissociation inhibitor -- -- KOG1439 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG5044 GDP dissociation inhibitor Molecular Function: Rab GDP-dissociation inhibitor activity (GO:0005093);|Molecular Function: GTPase activator activity (GO:0005096);|Cellular Component: intracellular (GO:0005622);|Biological Process: small GTPase mediated signal transduction (GO:0007264);|Biological Process: protein transport (GO:0015031);|Cellular Component: apoplast (GO:0048046); -- -- TRINITY_DN14441_c0_g1_i2 42.79438344 69.49130735 16.09745952 0.231647096 -2.1099995 2.22E-05 0.000168891 Down 3.9784 2.586235 5.170063 0.7075405 0.5045711 1.030728 XP_021686871.1 uncharacterized protein LOC110669491 [Hevea brasiliensis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN14450_c0_g1_i1 16.40365196 8.664735923 24.14256799 2.786301648 1.478351454 0.023955149 0.078438728 Up 0.3886813 0.600497 0.5269891 0.8037787 1.478202 1.287902 XP_010255731.1 PREDICTED: probable cellulose synthase A catalytic subunit 5 [UDP-forming] isoform X1 [Nelumbo nucifera] Q851L8|CESA5_ORYSJ Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica OX=39947 GN=CESA5 PE=2 SV=1 nnu:104596339 K10999 CESA cellulose synthase A -- -- -- -- -- -- -- M COG1215 "Glycosyl transferase, family 2" Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: plant-type primary cell wall biogenesis (GO:0009833);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: cellulose synthase activity (GO:0016759);|Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);|Biological Process: cellulose biosynthetic process (GO:0030244);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: cell wall organization (GO:0071555); "PF03552.13,PF13632.5" Cellulose synthase|Glycosyl transferase family group 2 TRINITY_DN14450_c0_g2_i1 13.12288734 5.887614202 20.35816049 3.457794581 1.789852165 0.014608106 0.052262432 Up 0.8687115 0.5070422 0.5255871 1.915766 2.050136 1.48774 XP_008233413.1 PREDICTED: probable cellulose synthase A catalytic subunit 3 [UDP-forming] [Prunus mume] A2XNT2|CESA5_ORYSI Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica OX=39946 GN=CESA5 PE=3 SV=1 pmum:103332444 K10999 CESA cellulose synthase A -- -- -- -- -- -- -- M COG1215 "Glycosyl transferase, family 2" Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);|Biological Process: cellulose biosynthetic process (GO:0030244);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: cell wall organization (GO:0071555); PF03552.13 Cellulose synthase TRINITY_DN14456_c0_g1_i1 29.20831702 43.59676244 14.81987161 0.339930554 -1.556688053 0.001490395 0.007436083 Down 1.313612 1.802735 1.60358 0.5803973 0.3794116 0.3310785 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14457_c0_g1_i1 51.67554748 76.90116884 26.44992612 0.343946997 -1.539741834 2.68E-05 0.00019985 Down 4.36641 4.985304 4.542068 1.448569 0.9758335 1.430068 EYU22200.1 hypothetical protein MIMGU_mgv1a021482mg [Erythranthe guttata] Q42716|C71A8_MENPI Cytochrome P450 71A8 OS=Mentha piperita OX=34256 GN=CYP71A8 PE=3 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" -- -- TRINITY_DN14464_c0_g1_i2 14.78254649 29.56509298 0 0 #NAME? 6.46E-10 9.38E-09 Down 2.823853 2.739452 3.234215 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14468_c0_g1_i1 17.17944841 5.772117613 28.58677921 4.952563534 2.308175483 0.000359264 0.002104395 Up 0.1803719 0.8661602 0.1361197 1.738627 1.499312 1.499043 XP_011078584.1 NAC domain-containing protein 92 [Sesamum indicum] Q9FK44|NAC87_ARATH NAC domain-containing protein 87 OS=Arabidopsis thaliana OX=3702 GN=NAC087 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDQ3 No apical meristem (NAM) protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737); PF02365.14 No apical meristem (NAM) protein TRINITY_DN14469_c0_g2_i1 23.81217185 37.54271653 10.08162717 0.268537498 -1.896804537 0.000541402 0.003029193 Down 6.350587 3.282232 6.196709 1.01954 1.019324 1.505316 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14470_c0_g2_i1 26.25457525 15.89956592 36.60958457 2.302552456 1.203234024 0.018918067 0.064747631 Up 1.266965 3.584717 2.386353 3.083921 4.4232 6.041419 PIN20229.1 hypothetical protein CDL12_07087 [Handroanthus impetiginosus] O49636|MPC4_ARATH Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana OX=3702 GN=MPC4 PE=3 SV=1 -- -- -- -- -- -- KOG1589 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG4111UER mitochondrial pyruvate carrier 2 Cellular Component: mitochondrion (GO:0005739);|Biological Process: mitochondrial pyruvate transmembrane transport (GO:0006850);|Cellular Component: integral component of mitochondrial inner membrane (GO:0031305);|Molecular Function: pyruvate transmembrane transporter activity (GO:0050833); PF03650.12 Uncharacterised protein family (UPF0041) TRINITY_DN14471_c0_g1_i2 152.1455102 62.84329619 241.4477243 3.842060154 1.941880107 2.81E-19 8.81E-18 Up 8.553217 8.532738 5.793246 21.91943 23.24096 25.83587 PIN10433.1 hypothetical protein CDL12_16982 [Handroanthus impetiginosus] O04681|PTI5_SOLLC Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YP8B Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: defense response (GO:0006952); PF00847.19 AP2 domain TRINITY_DN14474_c0_g1_i1 21.23296594 41.73618746 0.72974442 0.017484693 -5.837763734 9.06E-12 1.61E-10 Down 2.287097 3.488388 3.133683 0.0886595 0.08796033 0 XP_021652956.1 uncharacterized protein LOC110644478 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14479_c0_g1_i1 209.8255807 318.2403847 101.4107767 0.318660929 -1.649905953 9.35E-09 1.18E-07 Down 36.3299 26.67931 27.78457 7.237511 10.96164 5.096854 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14494_c0_g1_i1 23.39914353 35.85368738 10.94459968 0.305257296 -1.711902315 0.010790841 0.040512808 Down 7.447175 2.982442 5.331053 0.341066 1.000341 2.534363 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14498_c0_g2_i1 45.10521876 1.46891278 88.74152474 60.41306601 5.916788701 6.73E-26 3.08E-24 Up 0.2230972 3.53E-48 0.1139974 4.605705 5.250451 4.838797 PIM98090.1 hypothetical protein CDL12_29430 [Handroanthus impetiginosus] Q850K7|EXLB1_ORYSJ Expansin-like B1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLB1 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- G ENOG410Y95B expansin-like -- "PF01357.20,PF03330.17" Pollen allergen|Lytic transglycolase TRINITY_DN1449_c0_g1_i1 7.140090202 13.17765285 1.102527553 0.083666459 -3.579206811 0.002735866 0.012632402 Down 0.8309069 1.860633 2.125592 0.2648117 0 0 RHN71658.1 putative RNA-directed DNA polymerase [Medicago truncatula] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN14500_c0_g1_i1 97.23021612 135.504036 58.9563962 0.435089595 -1.200615578 0.000475776 0.00270299 Down 19.44644 28.02408 26.96384 6.816576 13.55752 5.693657 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14504_c0_g1_i1 18.78613167 28.16026915 9.411994189 0.334229554 -1.581088788 0.00920791 0.035578367 Down 1.792109 1.363202 2.998085 0.3082852 0.3634919 0.9791284 XP_012836131.1 PREDICTED: 125 kDa kinesin-related protein-like [Erythranthe guttata] O23826|KN5C_TOBAC Kinesin-like protein KIN-5C OS=Nicotiana tabacum OX=4097 GN=KIN5C PE=1 SV=1 sind:105161746 K10398 "KIF11, EG5" kinesin family member 11 -- -- KOG0243 Kinesin-like protein [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5059 Kinesin family member Molecular Function: microtubule motor activity (GO:0003777);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: spindle (GO:0005819);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based movement (GO:0007018);|Molecular Function: microtubule binding (GO:0008017); "PF00225.22,PF16796.4" Kinesin motor domain|Microtubule binding TRINITY_DN14508_c1_g1_i1 22.00302205 33.1946725 10.81137159 0.325695986 -1.618402155 0.004499717 0.019375417 Down 1.090583 2.116339 1.359679 0.3641051 0.3577895 0.4825181 PIN20104.1 DHHC-type Zn-finger protein [Handroanthus impetiginosus] Q9M115|ZDH16_ARATH Protein S-acyltransferase 18 OS=Arabidopsis thaliana OX=3702 GN=PAT18 PE=2 SV=2 sind:105162981 K20027 ZDHHC1_11 palmitoyltransferase ZDHHC1/11 -- -- KOG1311 DHHC-type Zn-finger proteins [R] POORLY CHARACTERIZED General function prediction only S COG5273 "Zinc finger, DHHC-type containing" Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: Golgi apparatus (GO:0005794);|Biological Process: protein targeting to membrane (GO:0006612);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: peptidyl-L-cysteine S-palmitoylation (GO:0018230);|Molecular Function: protein-cysteine S-palmitoyltransferase activity (GO:0019706);|Cellular Component: cytoplasmic vesicle membrane (GO:0030659); PF01529.19 DHHC palmitoyltransferase TRINITY_DN14511_c0_g1_i1 74.09085249 25.51565157 122.6660534 4.807482697 2.265281665 7.09E-13 1.39E-11 Up 1.308567 1.785625 1.518068 4.895128 6.51857 6.385791 KZV38999.1 hypothetical protein F511_39118 [Dorcoceras hygrometricum] Q9FHE1|GSTT3_ARATH Glutathione S-transferase T3 OS=Arabidopsis thaliana OX=3702 GN=GSTT3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZRC6 NA Molecular Function: glutathione transferase activity (GO:0004364);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: toxin catabolic process (GO:0009407); -- -- TRINITY_DN1451_c0_g1_i1 21.79252264 12.63924641 30.94579888 2.448389554 1.291833118 0.022815185 0.075407724 Up 0.6607618 0.6839806 0.7617792 1.167438 1.295722 1.689235 XP_012838124.1 PREDICTED: uncharacterized protein LOC105958655 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03478.17 Protein of unknown function (DUF295) TRINITY_DN14526_c0_g2_i1 13.57104959 21.99732992 5.144769264 0.233881534 -2.096150137 0.005648332 0.023516328 Down 2.365637 1.146796 1.944448 0.3616451 0.5080255 0.1509929 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14528_c0_g1_i1 14.77554111 23.30905935 6.242022868 0.267793855 -1.900805237 0.00949825 0.036526099 Down 4.10977 3.195685 2.137302 0.8783033 0.8822778 0.2175603 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14531_c0_g1_i1 265.0474279 50.72896916 479.3658865 9.449549133 3.240245496 1.19E-69 1.99E-67 Up 6.891565 4.04068 4.393596 40.03382 37.4092 39.28999 PIN21995.1 hypothetical protein CDL12_05295 [Handroanthus impetiginosus] Q58FX0|BAP2_ARATH BON1-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=BAP2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZCTQ bon association protein Biological Process: defense response (GO:0006952);|Cellular Component: membrane (GO:0016020); PF00168.29 C2 domain TRINITY_DN14536_c0_g1_i1 8.806538984 3.309765473 14.3033125 4.321548645 2.111548401 0.048252124 0.137668679 Up 0.3228658 0.5473789 0.9768808 3.41612 2.688377 0.6457622 XP_020550457.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Sesamum indicum] Q9ZUZ6|WTF9_ARATH "Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410YF4Q Plant organelle RNA recognition domain Biological Process: Group II intron splicing (GO:0000373);|Molecular Function: RNA binding (GO:0003723);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: mRNA processing (GO:0006397);|Biological Process: cytochrome complex assembly (GO:0017004); PF11955.7 Plant organelle RNA recognition domain TRINITY_DN14540_c0_g2_i1 28.94481755 42.33756175 15.55207335 0.36733512 -1.444831258 0.00279582 0.012872569 Down 1.114566 1.410787 1.730731 0.4439575 0.4636336 0.3518252 PIN17190.1 Phospholipase D1 [Handroanthus impetiginosus] P93400|PLDA1_TOBAC Phospholipase D alpha 1 OS=Nicotiana tabacum OX=4097 GN=PLD1 PE=2 SV=2 sind:105158388 K01115 PLD1_2 phospholipase D1/2 ko00564|ko04144|ko00565 Glycerophospholipid metabolism|Endocytosis|Ether lipid metabolism KOG1329 Phospholipase D1 [I] METABOLISM Lipid transport and metabolism I COG1502 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity) Molecular Function: phospholipase D activity (GO:0004630);|Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: membrane (GO:0016020);|Biological Process: lipid catabolic process (GO:0016042);|Biological Process: phosphatidylcholine metabolic process (GO:0046470);|Molecular Function: N-acylphosphatidylethanolamine-specific phospholipase D activity (GO:0070290); "PF00168.29,PF00614.21" C2 domain|Phospholipase D Active site motif TRINITY_DN14542_c0_g1_i1 83.0610716 111.5081439 54.61399934 0.48977588 -1.029806366 0.004352549 0.018829224 Down 16.66296 18.87078 9.974666 5.829477 6.077475 6.033679 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14545_c0_g1_i1 11.13132677 22.26265355 0 0 #NAME? 1.26E-07 1.37E-06 Down 3.002499 2.570294 3.711823 0 0 0 EPS69625.1 hypothetical protein M569_05141 [Genlisea aurea] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN14545_c0_g2_i1 5.565864826 11.13172965 0 0 #NAME? 0.02823417 0.089769116 Down 1.35843 5.178768 0.5167461 0 0 0 OMO88292.1 reverse transcriptase [Corchorus capsularis] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN14554_c0_g1_i1 21.1250293 30.66711032 11.58294829 0.377699371 -1.404689713 0.017848286 0.061639322 Down 4.723428 6.923813 2.797224 1.284827 1.274715 1.909189 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14555_c0_g1_i1 22.84181286 34.72038756 10.96323816 0.315757943 -1.663109069 0.020958638 0.070362801 Down 7.02329 2.549468 6.964357 1.556083 0.1181905 2.577406 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14568_c0_g1_i1 29.60924716 53.2944171 5.924077222 0.111157557 -3.169322059 7.01E-09 9.01E-08 Down 5.099943 3.410716 3.803039 0.1201049 0.5832532 0.3821102 CAN76473.1 hypothetical protein VITISV_016007 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only Q COG2124 Cytochrome p450 Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN14579_c0_g1_i1 246.8854359 90.62850782 403.142364 4.448295285 2.15325256 4.17E-30 2.34E-28 Up 6.52934 7.218866 6.24153 21.87979 22.00022 27.7873 EYU40062.1 hypothetical protein MIMGU_mgv11b021772mg [Erythranthe guttata] O03982|HIP39_ARATH Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1 -- -- -- -- -- -- KOG1603 Copper chaperone [P] METABOLISM Inorganic ion transport and metabolism S COG2608 heavy metal transport detoxification protein Biological Process: metal ion transport (GO:0030001);|Molecular Function: metal ion binding (GO:0046872); PF00403.25 Heavy-metal-associated domain TRINITY_DN14580_c0_g1_i1 34.83159852 48.62923893 21.03395812 0.432537267 -1.209103655 0.005534704 0.023107308 Down 2.372025 2.198015 2.343913 0.3342167 0.7358151 1.333246 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14583_c0_g1_i2 124.9531109 176.5104256 73.39579613 0.415815643 -1.265984061 1.43E-07 1.55E-06 Down 12.66053 15.69505 11.10892 3.353108 4.598831 5.262071 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14589_c0_g1_i2 70.26898718 120.341869 20.19610534 0.167822766 -2.574989656 2.62E-14 5.69E-13 Down 20.21602 28.82364 23.51444 4.355165 4.191645 1.21448 XP_021682743.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Hevea brasiliensis] -- -- -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein -- -- -- TRINITY_DN14614_c0_g1_i1 11.01574847 4.803042122 17.22845482 3.586988076 1.842772949 0.017347416 0.06011341 Up 1.465427 0.9473429 0 1.332478 2.220493 3.709157 XP_020553040.1 "putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Sesamum indicum]" Q9SXD1|PPR91_ARATH "Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2" -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- PF13041.5 PPR repeat family TRINITY_DN14615_c1_g2_i1 3.522218653 7.044437306 0 0 #NAME? 0.008931483 0.034669642 Down 1.825107 0.5769622 1.14739 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14615_c2_g1_i1 9.06698308 17.74817781 0.385788347 0.021736786 -5.523717537 2.28E-05 0.000172631 Down 1.489408 1.800865 1.540509 0 0 0.08112897 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14621_c0_g1_i1 15.49149347 4.580526362 26.40246058 5.764066942 2.527087091 0.000562856 0.003138402 Up 0.5100953 0 0.8899843 1.599187 2.445762 2.357294 PIN04549.1 hypothetical protein CDL12_22916 [Handroanthus impetiginosus] Q9LQR0|LBD1_ARATH LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHTF lob domain-containing protein Cellular Component: mitochondrion (GO:0005739); PF03195.13 Lateral organ boundaries (LOB) domain TRINITY_DN14626_c0_g1_i1 16.14304636 6.082245605 26.20384711 4.308252052 2.107102657 0.002952138 0.013473396 Up 0.09628023 0.2517134 0.8032947 1.438533 1.746963 0.940777 XP_022843226.1 uncharacterized protein LOC111366761 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN14626_c1_g2_i1 9.879952063 2.990354303 16.76954982 5.60788058 2.487455627 0.005083778 0.021484772 Up 0.6388895 0.2049368 0.2383366 1.414693 1.616289 1.94829 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14631_c0_g1_i5 40.73677276 12.52530862 68.94823689 5.504713613 2.460667508 9.11E-09 1.15E-07 Up 0.5597241 0.6492345 0.5481081 2.343078 3.067644 2.404345 XP_020552603.1 helicase protein MOM1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG0553 helicase -- -- -- TRINITY_DN14639_c0_g1_i1 13.25395278 6.034796154 20.47310941 3.392510515 1.762353287 0.014387492 0.051595152 Up 1.452948 0 0.4981877 1.411811 1.879071 2.058483 PON66838.1 hypothetical protein TorRG33x02_266960 [Trema orientale] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN14639_c0_g2_i1 20.03359234 12.23406233 27.83312236 2.275051541 1.18589923 0.046116691 0.132870513 Up 0.5926081 0.7458542 0.8543455 1.000897 1.643289 1.323516 PIN19969.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9M0G7|MIK1_ARATH MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN14641_c0_g1_i1 392.6566362 140.3733208 644.9399515 4.594462451 2.199896077 7.23E-53 8.53E-51 Up 17.25067 15.15766 13.77113 56.36986 57.27143 57.46198 XP_011076934.1 protein NIM1-INTERACTING 2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF15699.4 NPR1 interacting TRINITY_DN14642_c0_g1_i1 48.58902741 0 97.17805481 Inf Inf 4.71E-34 3.08E-32 Up 0 0 0 2.486353 2.779285 2.358124 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14643_c0_g1_i1 26.84008117 43.32523842 10.35492391 0.23900443 -2.064890736 8.87E-05 0.000594498 Down 4.648714 5.484932 5.340253 0.9808744 1.224686 0.8411572 XP_003518964.1 nuclear transcription factor Y subunit B-5 [Glycine max] O82248|NFYB5_ARATH Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana OX=3702 GN=NFYB5 PE=1 SV=1 -- -- -- -- -- -- KOG0869 "CCAAT-binding factor, subunit A (HAP3)" [K] INFORMATION STORAGE AND PROCESSING Transcription B COG2036 "Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling" "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Molecular Function: protein heterodimerization activity (GO:0046982);" PF00808.22 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TRINITY_DN14650_c0_g1_i1 25.77625491 39.18497963 12.36753019 0.315619156 -1.663743325 0.00112363 0.005787465 Down 4.582117 4.273416 7.881244 0.8783999 1.282568 2.202147 PIN11480.1 hypothetical protein CDL12_15918 [Handroanthus impetiginosus] Q84RF2|OPF17_ARATH Transcription repressor OFP17 OS=Arabidopsis thaliana OX=3702 GN=OFP17 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YX8K NA "Cellular Component: nucleus (GO:0005634);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);" -- -- TRINITY_DN14652_c0_g1_i1 20.59708881 30.79460481 10.39957282 0.337707624 -1.566153346 0.016641123 0.058108886 Down 2.857544 1.220384 1.551707 0.7102288 0.3512538 0.4457636 XP_012856614.1 PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD3 isoform X2 [Erythranthe guttata] Q9FIT8|AGD1_ARATH ADP-ribosylation factor GTPase-activating protein AGD1 OS=Arabidopsis thaliana OX=3702 GN=AGD1 PE=2 SV=2 sind:105158221 K12489 ACAP "Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein" ko04144 Endocytosis KOG0521 Putative GTPase activating proteins (GAPs) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms U COG5347 "domain, ankyrin repeat and PH domain" Molecular Function: GTPase activator activity (GO:0005096);|Cellular Component: endosome (GO:0005768);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: cytoskeleton organization (GO:0007010);|Cellular Component: endocytic vesicle (GO:0030139);|Cellular Component: root hair (GO:0035618);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: root hair cell tip growth (GO:0048768); "PF12796.6,PF01412.17,PF00023.29,PF13637.5,PF13857.5,PF13606.5" Ankyrin repeats (3 copies)|Putative GTPase activating protein for Arf|Ankyrin repeat|Ankyrin repeats (many copies)|Ankyrin repeats (many copies)|Ankyrin repeat TRINITY_DN14652_c0_g2_i1 5.969288662 11.93857732 0 0 #NAME? 0.000754121 0.004059269 Down 0.776002 3.617617 1.814452 0 0 0 XP_012856613.1 PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD3 isoform X1 [Erythranthe guttata] Q5W7F2|AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana OX=3702 GN=AGD3 PE=1 SV=1 sind:105158221 K12489 ACAP "Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein" ko04144 Endocytosis KOG0521 Putative GTPase activating proteins (GAPs) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms U COG5347 "domain, ankyrin repeat and PH domain" Molecular Function: GTPase activator activity (GO:0005096);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: endocytosis (GO:0006897);|Biological Process: response to auxin (GO:0009733);|Biological Process: leaf morphogenesis (GO:0009965);|Biological Process: xylem and phloem pattern formation (GO:0010051);|Biological Process: phloem or xylem histogenesis (GO:0010087);|Cellular Component: trans-Golgi network transport vesicle (GO:0030140);|Molecular Function: phosphatidylinositol binding (GO:0035091);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN14657_c0_g1_i1 66.07220281 0.571650609 131.572755 230.1628881 7.846511419 1.05E-42 9.14E-41 Up 0.05345156 0 0.04080199 5.170675 5.061417 5.316337 BAJ90061.1 predicted protein [Hordeum vulgare subsp. vulgare] P43239|ACT1_PNECA Actin-1 OS=Pneumocystis carinii OX=4754 PE=2 SV=1 mlr:MELLADRAFT_45600 K05692 ACTB_G1 actin beta/gamma 1 ko04145 Phagosome KOG0676 Actin and related proteins [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5277 Actin-related protein Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytoskeleton (GO:0005856); PF00022.18 Actin TRINITY_DN14661_c0_g1_i1 6.632429893 12.54038932 0.724470471 0.057770971 -4.113511439 0.002113963 0.010102022 Down 2.76842 1.175762 1.893933 0 0.2995673 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14661_c0_g2_i2 20.37281726 38.13405459 2.611579931 0.068484192 -3.868085168 4.18E-08 4.85E-07 Down 1.559127 1.93811 1.607369 0.04031186 0.1197049 0.1244857 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14661_c0_g3_i1 5.377660046 9.668614386 1.086705707 0.112395185 -3.153347858 0.022498306 0.074561261 Down 1.259413 0.948763 0.9474526 0 0.2632054 0 XP_008392443.1 PREDICTED: uncharacterized protein LOC103454628 isoform X1 [Malus domestica] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14661_c0_g4_i1 16.63146405 30.94819803 2.31473008 0.074793695 -3.740939534 0.002059445 0.009881026 Down 2.1917 9.872907 6.470994 0 0 1.21082 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14662_c0_g1_i1 21.70117363 13.57087385 29.83147341 2.198198417 1.136321615 0.045308875 0.131017058 Up 2.481622 2.028706 3.44878 4.49061 6.88504 2.772451 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14663_c0_g1_i2 15.45019795 24.97104473 5.929351171 0.237449063 -2.074310032 0.003210719 0.014483174 Down 2.835172 3.488501 2.975954 0.3533336 0.8791863 0.5522973 EYU41673.1 hypothetical protein MIMGU_mgv1a017010mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YX6S Plant protein 1589 of unknown function (A_thal_3526) -- PF09713.9 Plant protein 1589 of unknown function (A_thal_3526) TRINITY_DN14666_c0_g1_i2 19.73016759 28.33137726 11.12895792 0.392813869 -1.348082227 0.019827923 0.067333652 Down 2.449737 2.543119 4.206673 0.4547436 1.370573 0.9915923 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14667_c0_g1_i2 4064.178648 7511.722923 616.6343724 0.082089606 -3.606656634 1.27E-104 3.38E-102 Down 559.1947 562.2822 468.9195 32.22501 36.30932 36.76611 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14667_c0_g2_i1 17970.68181 33360.99606 2580.367573 0.077346838 -3.692513867 0 0 Down 6339.057 6203.359 6319.623 378.4945 378.1878 421.3833 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14677_c0_g5_i1 16.59861582 26.91583381 6.281397826 0.233371846 -2.09929757 0.002272451 0.010736196 Down 3.847181 4.893489 2.990954 1.316801 0.4461078 0.4533785 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1467_c0_g1_i1 27.37170962 3.43454524 51.308874 14.93905901 3.901017372 1.83E-11 3.15E-10 Up 0.3159398 0.3061679 0.05835914 2.02158 3.013338 2.905754 AOQ08558.1 "RpLP0-RA, partial [synthetic construct]" P41095|RLA0_ORYSJ 60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0130500 PE=1 SV=3 fve:101312142 K02941 "RP-LP0, RPLP0" large subunit ribosomal protein LP0 ko03010 Ribosome KOG0815 60S acidic ribosomal protein P0 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0244 50s ribosomal protein L10 Biological Process: ribosomal large subunit assembly (GO:0000027);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Molecular Function: large ribosomal subunit rRNA binding (GO:0070180); "PF00466.19,PF00428.18" Ribosomal protein L10|60s Acidic ribosomal protein TRINITY_DN14680_c0_g1_i1 2686.687629 1576.053722 3797.321536 2.40938585 1.268665452 3.50E-69 5.82E-67 Up 169.6031 183.2699 170.3438 331.2487 338.1535 347.8647 XP_011083044.1 60S ribosomal protein L14-2 [Sesamum indicum] Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis thaliana OX=3702 GN=RPL14A PE=2 SV=1 sind:105165662 K02875 "RP-L14e, RPL14" large subunit ribosomal protein L14e ko03010 Ribosome KOG3421 60S ribosomal protein L14 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2163 (ribosomal) protein Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: vacuole (GO:0005773);|Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Biological Process: ribosomal large subunit biogenesis (GO:0042273); PF01929.16 Ribosomal protein L14 TRINITY_DN14680_c0_g2_i1 61.56209354 105.567598 17.55658905 0.166306607 -2.588082609 1.11E-12 2.13E-11 Down 12.57022 12.23455 8.368207 0.6833219 1.735736 2.093225 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14685_c0_g1_i2 24.73495022 36.17490304 13.29499739 0.367519918 -1.444105656 0.024452265 0.079778744 Down 1.976412 2.674058 4.923453 1.312231 0.9269988 0.562563 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14689_c0_g1_i4 463.9652808 295.9546992 631.9758623 2.135380394 1.094493093 1.14E-17 3.21E-16 Up 20.53512 19.97458 19.51386 34.53532 36.11268 32.76741 PIN20946.1 hypothetical protein CDL12_06370 [Handroanthus impetiginosus] Q9LV60|CRR55_ARATH Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana OX=3702 GN=CRRSP55 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YD44 cysteine-rich repeat secretory protein Cellular Component: extracellular region (GO:0005576);|Biological Process: response to karrikin (GO:0080167); PF01657.16 Salt stress response/antifungal TRINITY_DN14691_c0_g1_i1 17.05368029 25.1989203 8.908440286 0.353524682 -1.500117152 0.019281334 0.065812286 Down 1.656356 1.855095 2.125942 0.3115459 0.6910932 0.5829755 XP_020547095.1 transcription factor MYB88-like isoform X2 [Sesamum indicum] F4IRB4|MYB88_ARATH Transcription factor MYB88 OS=Arabidopsis thaliana OX=3702 GN=MYB88 PE=1 SV=1 sind:105156552 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: embryo sac development (GO:0009553);|Biological Process: megasporogenesis (GO:0009554);|Biological Process: response to gravity (GO:0009629);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: guard cell differentiation (GO:0010052);|Biological Process: guard mother cell cytokinesis (GO:0010235);|Biological Process: stomatal complex formation (GO:0010376);|Biological Process: guard mother cell differentiation (GO:0010444);|Biological Process: regulation of DNA endoreduplication (GO:0032875);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: lateral root development (GO:0048527);|Biological Process: multicellular organismal water homeostasis (GO:0050891);|Biological Process: positive regulation of response to salt stress (GO:1901002);|Biological Process: positive regulation of lateral root development (GO:1901333);|Biological Process: positive regulation of response to water deprivation (GO:1902584);|Biological Process: regulation of cell cycle G1/S phase transition (GO:1902806);|Biological Process: regulation of stomatal complex patterning (GO:2000037);" -- -- TRINITY_DN14697_c0_g1_i1 21.15658996 39.73042705 2.582752871 0.065006924 -3.943262789 1.59E-08 1.96E-07 Down 2.229203 2.33329 2.258125 0 0.2350193 0.1274114 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14698_c1_g1_i1 121.9442036 242.8017014 1.086705707 0.004475692 -7.803673427 5.49E-70 9.29E-68 Down 28.29231 27.19983 26.67542 0 0.2572131 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14699_c0_g1_i2 41.0445983 77.58523325 4.50396334 0.058051812 -4.106515102 3.18E-16 8.04E-15 Down 3.152768 2.456196 3.132861 0.09103902 0.09020982 0.1983816 CAN79884.1 hypothetical protein VITISV_002539 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF00665.25 Integrase core domain TRINITY_DN14701_c0_g1_i3 45.19658212 29.26384529 61.12931895 2.088902478 1.062745141 0.004847622 0.020658269 Up 2.889537 2.784551 2.463206 4.618592 5.060846 3.912196 PIN14754.1 Cellular repressor of transcription [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG3374 Cellular repressor of transcription [K] INFORMATION STORAGE AND PROCESSING Transcription S ENOG4111WS9 Cellular Repressor of E1A-stimulated Genes -- PF13883.5 Pyridoxamine 5'-phosphate oxidase TRINITY_DN14705_c0_g1_i1 216.9589628 119.0700219 314.8479036 2.644224791 1.402844828 8.29E-15 1.89E-13 Up 16.07506 16.60234 15.23728 32.36383 34.33733 35.59578 XP_017976682.1 PREDICTED: uncharacterized protein LOC18598931 [Theobroma cacao] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z3R4 NA -- -- -- TRINITY_DN14706_c0_g2_i1 19.08130012 30.50292081 7.659679434 0.251112983 -1.993591475 0.001550349 0.00769215 Down 7.229408 5.30403 7.252469 1.931944 1.979594 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1470_c0_g1_i1 7.443215128 2.610655193 12.27577506 4.702181697 2.233330287 0.039769208 0.118082394 Up 0 0.9826622 0.3927603 0.5123873 2.637787 2.211568 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14712_c0_g1_i1 1865.893859 3731.787719 0 0 #NAME? 0 0 Down 97.17727 99.28864 97.6338 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14714_c0_g1_i1 36.82706445 21.79141883 51.86271007 2.379960225 1.250937463 0.0044862 0.019320879 Up 1.168921 1.052929 1.653127 2.569726 1.847496 2.953279 XP_022887669.1 F-box/kelch-repeat protein At1g67480 [Olea europaea var. sylvestris] Q9CAG8|FBK28_ARATH F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g67480 PE=2 SV=1 -- -- -- -- -- -- KOG1072 FOG: Kelch repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG4110X8D Kelch repeat-containing F-box family protein -- "PF01344.24,PF13964.5,PF13418.5,PF07646.14,PF00646.32,PF13415.5" "Kelch motif|Kelch motif|Galactose oxidase, central domain|Kelch motif|F-box domain|Galactose oxidase, central domain" TRINITY_DN14715_c0_g1_i3 45.06948432 89.77673341 0.362235236 0.004034845 -7.953270906 2.39E-27 1.19E-25 Down 3.339651 4.143576 4.596421 0 0.05188055 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14716_c0_g1_i1 6.561396875 2.246036773 10.87675698 4.842644211 2.275795012 0.045886306 0.132315911 Up 0.1796759 0.3546532 0.4115236 0.9825385 0.8298404 1.860514 GAY67457.1 hypothetical protein CUMW_256610 [Citrus unshiu] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF13855.5,PF12799.6,PF00560.32,PF13516.5" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine Rich repeat TRINITY_DN14719_c0_g1_i1 122.9743608 78.79386688 167.1548546 2.121419614 1.085030012 2.49E-06 2.24E-05 Up 9.119898 8.172423 6.921548 14.22562 13.56072 13.65235 XP_011086033.1 glutaredoxin-C9 [Sesamum indicum] Q9SGP6|GRXC9_ARATH Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1 sind:105167881 K03676 "grxC, GLRX, GLRX2" glutaredoxin 3 -- -- KOG1752 Glutaredoxin and related proteins [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0695 Glutaredoxin Biological Process: negative regulation of transcription by RNA polymerase II (GO:0000122);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: electron transfer activity (GO:0009055);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: salicylic acid mediated signaling pathway (GO:0009863);|Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);|Molecular Function: protein disulfide oxidoreductase activity (GO:0015035);|Biological Process: cell redox homeostasis (GO:0045454); PF00462.23 Glutaredoxin TRINITY_DN14726_c0_g1_i1 67.26558826 95.13338503 39.39779148 0.414132131 -1.271836954 8.85E-05 0.000593848 Down 9.004837 11.06284 7.051259 2.402142 3.41146 3.25099 XP_012856264.1 PREDICTED: uncharacterized protein LOC105975614 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YX3P NA -- -- -- TRINITY_DN14727_c0_g1_i1 27.42492119 38.65977973 16.19006264 0.418783106 -1.25572485 0.040194995 0.119105124 Down 6.148994 9.175322 3.893669 1.690716 3.422035 1.30285 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14728_c0_g1_i4 7.892733649 12.87176357 2.913703731 0.226363988 -2.143283637 0.03539799 0.107768005 Down 1.688676 2.138675 2.390711 0.3631829 0.7282257 0 XP_011085607.1 probable WRKY transcription factor 14 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14740_c0_g1_i2 50.06484351 27.0402107 73.08947633 2.702992116 1.434557304 9.93E-05 0.00065897 Up 2.410284 1.514305 2.009384 4.834986 3.146881 5.02855 XP_011086107.1 stem-specific protein TSJT1-like [Sesamum indicum] P24805|TSJT1_TOBAC Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YD56 Stem-specific protein -- PF12481.7 Aluminium induced protein TRINITY_DN14741_c0_g1_i2 45.50335879 20.65431801 70.35239958 3.406183615 1.768156207 7.50E-06 6.21E-05 Up 2.610324 2.063939 2.865047 8.274684 5.169594 7.250403 PIN11344.1 hypothetical protein CDL12_16053 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41119EW Protein of unknown function (DUF1070) -- -- -- TRINITY_DN14743_c0_g2_i1 32.3588599 44.04407098 20.67364882 0.469385512 -1.091154782 0.017974338 0.061975628 Down 4.060765 3.683175 3.946645 2.242651 1.347873 0.8047728 XP_011092358.1 F-box protein At1g10780 [Sesamum indicum] Q9SAC4|FB2_ARATH F-box protein At1g10780 OS=Arabidopsis thaliana OX=3702 GN=At1g10780 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZT2W F-box protein Cellular Component: plasmodesma (GO:0009506); -- -- TRINITY_DN14749_c0_g1_i2 11.26789151 5.135975179 17.39980785 3.387829428 1.760361239 0.024152612 0.078948623 Up 0.5355874 0.4461969 0.2341013 0.9194827 1.428122 0.9950538 XP_011096448.1 ethylene-responsive transcription factor ERF091 [Sesamum indicum] O49515|ERF91_ARATH Ethylene-responsive transcription factor ERF091 OS=Arabidopsis thaliana OX=3702 GN=ERF091 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YSAI AP2 Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: response to chitin (GO:0010200); PF00847.19 AP2 domain TRINITY_DN14750_c0_g1_i1 54.67853571 29.40058814 79.95648327 2.719553871 1.443370004 2.93E-05 0.000217335 Up 4.416617 5.307603 3.073257 10.40181 8.023667 9.621348 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14756_c0_g1_i2 74.23758349 32.93202879 115.5431382 3.508533864 1.810868287 4.23E-09 5.61E-08 Up 0.8451872 1.101823 1.030109 2.71017 2.920745 2.87686 PIN05851.1 "Transcription factor, Myb superfamily [Handroanthus impetiginosus]" Q9LTV4|MYB10_ARATH Transcription factor MYB10 OS=Arabidopsis thaliana OX=3702 GN=MYB10 PE=2 SV=1 sind:105178533 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to absence of light (GO:0009646);|Biological Process: response to ethylene (GO:0009723);|Biological Process: response to zinc ion (GO:0010043);|Biological Process: regulation of gene expression (GO:0010468);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: response to cadmium ion (GO:0046686);|Biological Process: stress response to nickel ion (GO:1990532);|Biological Process: response to iron ion starvation (GO:1990641); "PF03754.12,PF02362.20,PF00249.30,PF13921.5" Domain of unknown function (DUF313)|B3 DNA binding domain|Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN14761_c0_g1_i3 120.0737384 165.7092645 74.43821224 0.44920972 -1.154538951 1.20E-06 1.14E-05 Down 16.04284 15.8735 16.74302 4.830142 6.163761 6.665577 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14762_c0_g1_i1 13.13043752 4.550802683 21.71007235 4.770602872 2.254171594 0.009391857 0.036169049 Up 0.5388768 0.651543 0.2082218 1.371196 2.938958 1.088886 XP_011084783.1 quinone oxidoreductase-like protein 2 homolog [Sesamum indicum] O23939|ENOX_FRAVE 2-methylene-furan-3-one reductase OS=Fragaria vesca OX=57918 GN=EO PE=2 SV=2 -- -- -- -- -- -- KOG1198 Zinc-binding oxidoreductase [CR] METABOLISM|POORLY CHARACTERIZED Energy production and conversion |General function prediction only C COG0604 alcohol dehydrogenase Molecular Function: zinc ion binding (GO:0008270);|Molecular Function: furaneol oxidoreductase activity (GO:0102978); -- -- TRINITY_DN14763_c0_g1_i1 198.0289188 396.0578377 0 0 #NAME? 2.48E-46 2.41E-44 Down 47.41396 51.34611 33.03513 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14763_c0_g2_i2 83.56628356 167.1325671 0 0 #NAME? 1.99E-52 2.31E-50 Down 14.95925 12.84564 16.53172 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14778_c0_g1_i1 9.739324017 19.47864803 0 0 #NAME? 0.001814952 0.008833079 Down 4.862487 0.9168385 1.921073 3.67E-58 4.36E-58 3.27E-36 PSS06028.1 Protein TIC 20-v like [Actinidia chinensis var. chinensis] Q9FM67|TI205_ARATH "Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-V PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG4111UMD protein transport Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: thylakoid (GO:0009579);|Cellular Component: chloroplast inner membrane (GO:0009706);|Biological Process: protein transport (GO:0015031);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN14780_c0_g1_i3 59.68085293 119.3617059 0 0 #NAME? 1.49E-37 1.10E-35 Down 11.46629 10.17642 9.101841 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14784_c0_g1_i2 53.67587105 71.74363206 35.60811003 0.496324329 -1.01064492 0.005553548 0.02317876 Down 6.55519 8.619159 4.945551 2.761762 2.900161 2.514826 PIN07496.1 hypothetical protein CDL12_19933 [Handroanthus impetiginosus] Q9SJ45|OPF15_ARATH Transcription repressor OFP15 OS=Arabidopsis thaliana OX=3702 GN=OFP15 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHQG atofp18 ofp18 "Cellular Component: nucleus (GO:0005634);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);" PF04844.12 "Transcriptional repressor, ovate" TRINITY_DN14785_c0_g1_i2 11.09656338 19.19048452 3.002642227 0.15646516 -2.676086648 0.002472319 0.011551823 Down 3.146916 1.591195 1.411203 0.1708887 0.1699337 0.3543172 XP_019157841.1 PREDICTED: B3 domain-containing protein At3g19184 [Ipomoea nil] Q1G3M3|Y3918_ARATH B3 domain-containing protein At3g19184 OS=Arabidopsis thaliana OX=3702 GN=At3g19184 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG4111SA1 B3 domain-containing protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634); PF02362.20 B3 DNA binding domain TRINITY_DN1478_c0_g1_i1 15.03380509 30.06761017 0 0 #NAME? 3.80E-09 5.07E-08 Down 5.38592 2.46672 6.06482 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14790_c0_g1_i3 16.12718643 24.43263829 7.82173458 0.320134669 -1.643249171 0.015311861 0.054283919 Down 2.35818 2.209273 1.769521 0.3898313 0.5844669 0.6156192 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14793_c0_g1_i1 138.7460995 89.11782074 188.3743783 2.113767782 1.079816891 3.36E-06 2.96E-05 Up 9.16655 5.390471 11.34691 14.54332 16.18784 13.57895 XP_020550703.1 uncharacterized protein At5g01610 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YRQA "Protein of unknown function, DUF538" -- PF04398.11 "Protein of unknown function, DUF538" TRINITY_DN14795_c0_g1_i7 39.18740658 1.801845837 76.57296733 42.49695827 5.409287679 1.10E-20 3.74E-19 Up 0.09940894 0 0.3038043 4.420756 4.170313 4.427642 EOD12530.1 hypothetical protein EMIHUDRAFT_374268 [Emiliania huxleyi CCMP1516] P42740|UBIQP_AGLNE Polyubiquitin OS=Aglaothamnion neglectum OX=2765 PE=2 SV=2 -- -- -- -- -- -- KOG0001 Ubiquitin and ubiquitin-like proteins [OR] CELLULAR PROCESSES AND SIGNALING|POORLY CHARACTERIZED "Posttranslational modification, protein turnover, chaperones |General function prediction only " O COG5272 ubiquitin Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737); "PF00240.22,PF11976.7,PF14560.5,PF13881.5,PF10302.8,PF13019.5,PF11069.7,PF04452.13" Ubiquitin family|Ubiquitin-2 like Rad60 SUMO-like|Ubiquitin-like domain|Ubiquitin-2 like Rad60 SUMO-like|DUF2407 ubiquitin-like domain|Telomere stability and silencing|Protein of unknown function (DUF2870)|RNA methyltransferase TRINITY_DN147_c0_g1_i1 3.481838353 0 6.963676706 Inf Inf 0.029958669 0.0941182 Up 0 0 0 0.3167455 2.573445 0.6876429 OAJ38546.1 hypothetical protein BDEG_22457 [Batrachochytrium dendrobatidis JEL423] Q8SS35|Y4A0_ENCCU Probable myosin heavy chain ECU04_1000 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=ECU04_1000 PE=1 SV=2 -- -- -- -- -- -- KOG0161 Myosin class II heavy chain [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5022 myosin heavy chain Molecular Function: motor activity (GO:0003774);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: myosin complex (GO:0016459);|Molecular Function: actin filament binding (GO:0051015); -- -- TRINITY_DN147_c0_g2_i1 4.652388265 0 9.30477653 Inf Inf 0.000856763 0.004552922 Up 0 0 0 1.172108 1.417514 1.525601 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF01576.18 Myosin tail TRINITY_DN14800_c0_g1_i4 47.69506435 24.5284126 70.8617161 2.888964617 1.530552534 5.40E-05 0.000379881 Up 1.760639 1.256208 1.716865 3.594247 3.978583 3.483421 XP_011091816.1 xanthoxin dehydrogenase [Sesamum indicum] Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana OX=3702 GN=ABA2 PE=1 SV=1 sind:105172159 K09841 ABA2 xanthoxin dehydrogenase ko00906 Carotenoid biosynthesis KOG0725 Reductases with broad range of substrate specificities [R] POORLY CHARACTERIZED General function prediction only S COG1028 Dehydrogenase reductase Molecular Function: alcohol dehydrogenase (NAD) activity (GO:0004022);|Cellular Component: cytosol (GO:0005829);|Biological Process: proline biosynthetic process (GO:0006561);|Biological Process: response to heat (GO:0009408);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: abscisic acid biosynthetic process (GO:0009688);|Biological Process: response to fructose (GO:0009750);|Biological Process: regulation of abscisic acid biosynthetic process (GO:0010115);|Biological Process: sugar mediated signaling pathway (GO:0010182);|Molecular Function: xanthoxin dehydrogenase activity (GO:0010301); "PF13561.5,PF00106.24,PF08659.9" Enoyl-(Acyl carrier protein) reductase|short chain dehydrogenase|KR domain TRINITY_DN14802_c0_g1_i2 20.58276731 41.16553463 0 0 #NAME? 0.000996955 0.005208282 Down 4.087724 3.660093 6.74E-65 3.00E-54 1.60E-48 7.81E-62 KRH06319.1 hypothetical protein GLYMA_16G016100 [Glycine max] P10708|CB12_SOLLC "Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB7 PE=3 SV=1" gmx:100802138 K08908 LHCA2 light-harvesting complex I chlorophyll a/b binding protein 2 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- S ENOG410XTCT Chlorophyll A-B binding protein "Biological Process: response to light stimulus (GO:0009416);|Cellular Component: photosystem I (GO:0009522);|Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis, light harvesting in photosystem I (GO:0009768);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: plastoglobule (GO:0010287);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: metal ion binding (GO:0046872);" PF00504.20 Chlorophyll A-B binding protein TRINITY_DN14806_c0_g1_i3 106.7857214 148.8671943 64.70424847 0.434644105 -1.202093516 1.60E-06 1.49E-05 Down 14.17352 16.5632 15.98975 3.473015 5.149632 7.736607 XP_011101029.2 uncharacterized protein LOC105179129 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YQDN expressed protein -- -- -- TRINITY_DN14816_c0_g1_i1 86.71491769 37.45470142 135.975134 3.630388945 1.860124121 5.76E-11 9.42E-10 Up 2.492827 1.032341 1.68362 5.522787 4.749735 5.027741 XP_020552854.1 uncharacterized protein LOC105172030 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG411197G NA -- "PF13405.5,PF00036.31,PF13499.5,PF13202.5,PF13833.5" EF-hand domain|EF hand|EF-hand domain pair|EF hand|EF-hand domain pair TRINITY_DN14826_c0_g1_i1 14.91540769 24.89923141 4.93158396 0.198061694 -2.335978209 0.001251948 0.006371755 Down 2.92934 2.097973 2.218348 0.1332808 0.1328681 0.793396 KZV27152.1 hypothetical protein F511_21659 [Dorcoceras hygrometricum] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); PF14372.5 Domain of unknown function (DUF4413) TRINITY_DN1482_c0_g1_i1 14.21919822 28.43839643 0 0 #NAME? 1.60E-09 2.22E-08 Down 3.170314 5.5328 4.094054 0 0 0 AIC62023.1 "RPS12, partial [synthetic construct]" Q9SMI3|RS12_CYAPA 40S ribosomal protein S12 OS=Cyanophora paradoxa OX=2762 GN=RPS12 PE=2 SV=1 uma:UMAG_01318 K02951 "RP-S12e, RPS12" small subunit ribosomal protein S12e ko03010 Ribosome KOG3406 40S ribosomal protein S12 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1358 (ribosomal) protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF01248.25 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TRINITY_DN14832_c0_g1_i1 36.87139754 52.99357229 20.74922278 0.391542255 -1.352760085 0.003733435 0.01650646 Down 4.115795 3.891771 1.988704 1.160351 1.080276 0.8974844 XP_011092776.1 BURP domain-containing protein BNM2A-like [Sesamum indicum] Q9XI99|USPL1_ARATH BURP domain protein USPL1 OS=Arabidopsis thaliana OX=3702 GN=USPL1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111C4C BURP domain-containing protein Cellular Component: protein storage vacuole (GO:0000326);|Cellular Component: late endosome (GO:0005770);|Cellular Component: Golgi stack (GO:0005795);|Biological Process: seed development (GO:0048316); PF03181.14 BURP domain TRINITY_DN14833_c0_g1_i1 42.02787146 84.05574292 0 0 #NAME? 1.02E-26 4.88E-25 Down 4.060579 3.905467 3.175576 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14838_c0_g1_i2 28.80040102 41.29015721 16.31064483 0.395025012 -1.339984092 0.021530916 0.071857079 Down 3.963996 5.687854 2.14119 1.457695 1.249182 1.077276 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14847_c0_g1_i2 17.91406637 1.621857421 34.20627531 21.09080297 4.398542117 1.70E-08 2.08E-07 Up 0.06212987 0.05996127 0.1874424 1.740667 1.484044 1.703501 XP_011096320.1 transcriptional corepressor LEUNIG-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14856_c0_g2_i1 37.58479818 74.43457799 0.735018369 0.00987469 -6.662048855 1.96E-21 7.06E-20 Down 6.358655 7.813728 6.616167 0.1365652 1.98E-31 9.47E-18 PIN25008.1 DNA helicase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XS63 Exonuclease 3'-5' domain containing 2 -- -- -- TRINITY_DN14857_c0_g1_i1 115.7990618 231.5981236 0 0 #NAME? 1.86E-71 3.26E-69 Down 5.794605 5.694132 5.561214 0 0 0 XP_022868383.1 uncharacterized protein LOC111387969 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF03732.16 Retrotransposon gag protein TRINITY_DN14857_c0_g2_i1 50.21825507 100.4365101 0 0 #NAME? 3.79E-25 1.66E-23 Down 4.669409 7.424964 5.117395 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14863_c0_g1_i1 142.7375676 93.33337851 192.1417566 2.058660682 1.041706058 1.79E-06 1.64E-05 Up 7.015151 8.655995 7.725551 11.66893 13.53952 13.47492 EYU39536.1 hypothetical protein MIMGU_mgv1a020523mg [Erythranthe guttata] Q9STE7|R13L3_ARATH Putative disease resistance RPP13-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPP13L3 PE=3 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat -- PF00931.21 NB-ARC domain TRINITY_DN14867_c0_g1_i8 23.10378226 39.39132842 6.816236104 0.173039001 -2.530830856 0.000708357 0.003845766 Down 5.128426 1.925343 4.387177 0.5658977 0 1.029195 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14869_c0_g1_i2 6422.444691 1579.233364 11265.65602 7.133623362 2.834635047 0 0 Up 151.8216 147.11 139.9279 850.1731 858.2065 817.0721 XP_022854777.1 14 kDa proline-rich protein DC2.15-like [Olea europaea var. sylvestris] P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZMQE 14 kDa proline-rich protein DC2.15-like Cellular Component: integral component of membrane (GO:0016021); "PF14547.5,PF00234.21" Hydrophobic seed protein|Protease inhibitor/seed storage/LTP family TRINITY_DN14870_c0_g1_i2 187.0673522 99.27551797 274.8591864 2.768650237 1.46918281 2.75E-14 5.97E-13 Up 5.030166 4.60336 4.316258 10.61148 10.9305 9.610448 XP_011094308.1 caffeoylshikimate esterase-like [Sesamum indicum] Q9C942|CSE_ARATH Caffeoylshikimate esterase OS=Arabidopsis thaliana OX=3702 GN=CSE PE=1 SV=1 -- -- -- -- -- -- KOG1455 Lysophospholipase [I] METABOLISM Lipid transport and metabolism I COG2267 alpha beta hydrolase fold Molecular Function: 2-acylglycerol O-acyltransferase activity (GO:0003846);|Molecular Function: lysophospholipase activity (GO:0004622);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: lignin biosynthetic process (GO:0009809);|Biological Process: response to zinc ion (GO:0010043);|Cellular Component: membrane (GO:0016020);|Molecular Function: hydrolase activity (GO:0016787);|Biological Process: response to hydrogen peroxide (GO:0042542);|Biological Process: response to cadmium ion (GO:0046686);|Molecular Function: caffeoyl-CoA: alcohol caffeoyl transferase activity (GO:0090430); "PF12146.7,PF00326.20" "Serine aminopeptidase, S33|Prolyl oligopeptidase family" TRINITY_DN14871_c0_g2_i1 76.34330758 45.21285717 107.473758 2.377061852 1.249179443 2.62E-05 0.000195522 Up 3.257894 3.295771 3.31412 5.263048 6.782201 6.925113 PIM97961.1 hypothetical protein CDL12_29562 [Handroanthus impetiginosus] Q8GWK6|NC104_ARATH NAC domain-containing protein 104 OS=Arabidopsis thaliana OX=3702 GN=NAC104 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHMV (NAC) domain-containing protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: xylem development (GO:0010089);|Biological Process: regulation of programmed cell death (GO:0043067);|Biological Process: shoot system development (GO:0048367); PF02365.14 No apical meristem (NAM) protein TRINITY_DN14873_c0_g1_i1 97.20808653 129.9342205 64.48195254 0.496266128 -1.010814105 0.009196942 0.035545064 Down 21.83449 16.06669 14.38541 8.112319 3.058402 9.77214 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14874_c0_g1_i1 522.7683228 1007.665826 37.87081926 0.037582717 -4.733786834 9.03E-190 6.12E-187 Down 55.0179 50.88687 56.8812 1.931696 1.438759 1.548943 XP_011080358.1 cinnamoyl-CoA reductase 1 [Sesamum indicum] Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana OX=3702 GN=CCR1 PE=1 SV=1 -- -- -- -- -- -- KOG1502 Flavonol reductase/cinnamoyl-CoA reductase [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms M COG0451 Nad-dependent epimerase dehydratase "Cellular Component: cytosol (GO:0005829);|Biological Process: circadian rhythm (GO:0007623);|Biological Process: response to cold (GO:0009409);|Biological Process: lignin biosynthetic process (GO:0009809);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);|Molecular Function: cinnamoyl-CoA reductase activity (GO:0016621);|Molecular Function: coenzyme binding (GO:0050662);" "PF01370.20,PF01073.18,PF07993.11,PF13460.5,PF16363.4,PF05368.12" "NAD dependent epimerase/dehydratase family|3-beta hydroxysteroid dehydrogenase/isomerase family|Male sterility protein|NAD(P)H-binding|GDP-mannose 4,6 dehydratase|NmrA-like family" TRINITY_DN14884_c0_g1_i2 116.9239476 66.4144271 167.433468 2.521040613 1.33401936 5.10E-08 5.86E-07 Up 1.91464 3.231954 2.817989 5.259518 4.517572 6.446458 XP_011091519.1 probable serine/threonine-protein kinase PBL11 [Sesamum indicum] Q65XV8|RK176_ORYSJ Receptor-like cytoplasmic kinase 176 OS=Oryza sativa subsp. japonica OX=39947 GN=RLCK176 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Biological Process: innate immune response (GO:0045087); "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN14891_c0_g1_i1 589.9467051 1033.330149 146.563261 0.141835851 -2.817705855 5.16E-106 1.41E-103 Down 36.52482 36.01136 38.19872 3.9231 4.690111 4.057215 XP_020552840.1 pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like [Sesamum indicum] Q6TXD2|5MAT2_SALSN Pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase OS=Salvia splendens OX=180675 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41113XM Transferase family "Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);|Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);|Biological Process: pigmentation (GO:0043473);|Molecular Function: anthocyanin 5-O-glucoside-4'''-O-malonyltransferase activity (GO:0102801);" PF02458.14 Transferase family TRINITY_DN14892_c0_g2_i1 15.83658387 26.47320168 5.199966068 0.19642377 -2.347958571 0.000961631 0.005042897 Down 3.328156 2.70612 2.404071 1.065689 0 0.2769833 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14899_c0_g1_i1 35.58657005 18.8243073 52.3488328 2.78091682 1.475560593 0.000538055 0.003012696 Up 3.333885 2.357853 1.747772 5.285794 5.977103 5.452947 EDK40566.2 calmodulin [Meyerozyma guilliermondii ATCC 6260] O23320|CML8_ARATH Calmodulin-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=CML8 PE=1 SV=1 sind:105165316 K02183 CALM calmodulin ko04626|ko04070 Plant-pathogen interaction|Phosphatidylinositol signaling system KOG0027 Calmodulin and related proteins (EF-Hand superfamily) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410Y7DQ NA Molecular Function: calcium ion binding (GO:0005509);|Biological Process: detection of calcium ion (GO:0005513);|Cellular Component: nucleus (GO:0005634);|Biological Process: calcium-mediated signaling (GO:0019722);|Molecular Function: enzyme regulator activity (GO:0030234);|Biological Process: spindle pole body organization (GO:0051300); "PF00036.31,PF13499.5,PF13833.5,PF13405.5,PF13202.5,PF14658.5,PF10591.8,PF12763.6" EF hand|EF-hand domain pair|EF-hand domain pair|EF-hand domain|EF hand|EF-hand domain|Secreted protein acidic and rich in cysteine Ca binding region|Cytoskeletal-regulatory complex EF hand TRINITY_DN14909_c0_g1_i1 32.84281398 65.68562796 0 0 #NAME? 3.51E-21 1.26E-19 Down 2.394728 2.656643 2.583943 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14915_c1_g1_i5 33.42890624 61.54817143 5.309641042 0.086268055 -3.535029759 2.43E-11 4.14E-10 Down 2.598484 2.893513 2.05551 0.1621181 1.41E-51 0.3475108 OMO82853.1 hypothetical protein COLO4_22790 [Corchorus olitorius] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41115QT X8 domain -- -- -- TRINITY_DN14916_c1_g1_i1 98.68617758 144.0355844 53.33677074 0.370302734 -1.433222893 6.02E-08 6.86E-07 Down 7.807256 7.945327 9.062558 3.157014 2.315368 1.965593 XP_012849930.1 PREDICTED: cytosolic sulfotransferase 14-like [Erythranthe guttata] Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15 OS=Arabidopsis thaliana OX=3702 GN=SOT15 PE=1 SV=1 -- -- -- -- -- -- KOG1584 Sulfotransferase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111H56 Sulfotransferase Cellular Component: cytoplasm (GO:0005737);|Biological Process: jasmonic acid metabolic process (GO:0009694);|Biological Process: response to jasmonic acid (GO:0009753);|Molecular Function: hydroxyjasmonate sulfotransferase activity (GO:0080131); "PF00685.26,PF13469.5" Sulfotransferase domain|Sulfotransferase family TRINITY_DN14918_c0_g1_i1 20.70961389 31.06148724 10.35774055 0.33345926 -1.584417583 0.009796793 0.037436301 Down 3.295073 1.412449 2.14523 0.8897516 0.4967974 0.4275187 XP_020548821.1 putative disease resistance RPP13-like protein 1 [Sesamum indicum] Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RPPL1 PE=3 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat -- "PF12799.6,PF13855.5" Leucine Rich repeats (2 copies)|Leucine rich repeat TRINITY_DN14918_c0_g2_i1 19.64739163 28.11590248 11.17888078 0.397599927 -1.330610602 0.025366426 0.082182442 Down 1.543349 1.26785 1.445479 0.4610851 0.4071269 0.5431948 XP_020548823.1 putative disease resistance RPP13-like protein 1 [Sesamum indicum] Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RPPL1 PE=3 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat -- PF00931.21 NB-ARC domain TRINITY_DN14927_c0_g1_i1 125.967692 33.63777716 218.2976068 6.489656132 2.698142036 2.08E-27 1.04E-25 Up 1.994265 1.149732 1.231667 7.608039 8.386297 6.718093 XP_011088647.1 hippocampus abundant transcript 1 protein [Sesamum indicum] -- -- -- -- -- -- -- -- KOG2816 Predicted transporter ADD1 (major facilitator superfamily) [R] POORLY CHARACTERIZED General function prediction only U ENOG41101QS Major Facilitator Superfamily -- PF07690.15 Major Facilitator Superfamily TRINITY_DN14933_c0_g1_i3 62.21401467 37.53423911 86.89379024 2.315053996 1.211045843 0.000162534 0.001030435 Up 2.028421 2.345518 1.527115 3.603574 3.782842 3.650025 XP_012843824.1 PREDICTED: vestitone reductase-like [Erythranthe guttata] Q9SEV0|BAN_ARATH Anthocyanidin reductase OS=Arabidopsis thaliana OX=3702 GN=BAN PE=1 SV=2 -- -- -- -- -- -- KOG1502 Flavonol reductase/cinnamoyl-CoA reductase [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms M COG0451 Nad-dependent epimerase dehydratase "Biological Process: flavonoid biosynthetic process (GO:0009813);|Biological Process: negative regulation of flavonoid biosynthetic process (GO:0009964);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);|Molecular Function: anthocyanidin reductase activity (GO:0033729);|Molecular Function: coenzyme binding (GO:0050662);" -- -- TRINITY_DN14941_c0_g1_i2 2871.361431 1888.334784 3854.388077 2.041157166 1.029387272 9.77E-49 1.03E-46 Up 70.39656 77.29459 65.2006 110.6616 120.5267 119.3955 XP_002531669.1 40S ribosomal protein S6 [Ricinus communis] P51430|RS62_ARATH 40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3 rcu:8273524 K02991 "RP-S6e, RPS6" small subunit ribosomal protein S6e ko03010 Ribosome KOG1646 40S ribosomal protein S6 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2125 40s ribosomal protein s6 Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to cytokinin (GO:0009735);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Cellular Component: polysomal ribosome (GO:0042788); PF01092.18 Ribosomal protein S6e TRINITY_DN14943_c0_g1_i1 39.04385781 78.08771562 0 0 #NAME? 4.52E-25 1.97E-23 Down 4.410725 4.455369 4.911681 0 0 0 XP_011081246.1 vesicle-associated protein 1-1 [Sesamum indicum] Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1 -- -- -- -- -- -- KOG0439 VAMP-associated protein involved in inositol metabolism [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U COG5066 "Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod (By similarity)" Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: protein targeting (GO:0006605);|Cellular Component: integral component of membrane (GO:0016021); PF00635.25 MSP (Major sperm protein) domain TRINITY_DN14946_c0_g1_i1 33.00082547 18.63923959 47.36241135 2.541005555 1.34539953 0.003100419 0.014058266 Up 0.4451591 0.6287902 0.6113496 1.214 1.289604 0.9147391 EYU46796.1 hypothetical protein MIMGU_mgv1a002033mg [Erythranthe guttata] F4HXL0|PLIP2_ARATH "Phospholipase A1 PLIP2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PLIP2 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZUTC lipase class 3 family protein Biological Process: defense response to insect (GO:0002213);|Molecular Function: phospholipase A1 activity (GO:0008970);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: lipid catabolic process (GO:0016042);|Biological Process: positive regulation of defense response (GO:0031349);|Cellular Component: chloroplast membrane (GO:0031969);|Molecular Function: galactolipase activity (GO:0047714);|Molecular Function: phosphatidylserine 1-acylhydrolase activity (GO:0052739);|Molecular Function: 1-acyl-2-lysophosphatidylserine acylhydrolase activity (GO:0052740);|Molecular Function: 1-18:1-2-16:0-monogalactosyldiacylglycerol lipase activity (GO:0102549); PF01764.24 Lipase (class 3) TRINITY_DN14950_c0_g1_i1 19.46037499 27.02513001 11.89561998 0.440168835 -1.183871093 0.048005333 0.137085183 Down 1.779205 1.73885 1.703518 0.7364162 0.5126714 0.6200217 XP_011080095.1 uncharacterized protein LOC105163450 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHIB NA -- -- -- TRINITY_DN14953_c0_g1_i1 102.2998146 53.49057249 151.1090566 2.82496615 1.498233581 6.95E-09 8.95E-08 Up 3.849016 4.573123 3.965757 8.592219 10.29587 9.3767 PIN02683.1 hypothetical protein CDL12_24798 [Handroanthus impetiginosus] P42735|CDI8_ARATH Cadmium-induced protein AS8 OS=Arabidopsis thaliana OX=3702 GN=At4g19070 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YM35 cadmium-induced protein -- -- -- TRINITY_DN14955_c0_g1_i1 580.5300579 894.9480333 266.1120826 0.297349201 -1.749769896 3.15E-47 3.17E-45 Down 112.0622 120.2533 117.8323 26.39459 30.50351 27.21976 XP_011069878.1 "probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Sesamum indicum]" Q6YU51|DXS2_ORYSJ "Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190000 PE=2 SV=1" sind:105155662 K01662 dxs 1-deoxy-D-xylulose-5-phosphate synthase ko00730|ko00900 Thiamine metabolism|Terpenoid backbone biosynthesis KOG0523 Transketolase [G] METABOLISM Carbohydrate transport and metabolism H COG1154 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (By similarity) Molecular Function: 1-deoxy-D-xylulose-5-phosphate synthase activity (GO:0008661);|Biological Process: thiamine biosynthetic process (GO:0009228);|Cellular Component: chloroplast (GO:0009507);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: 1-deoxy-D-xylulose 5-phosphate biosynthetic process (GO:0052865); PF13292.5 1-deoxy-D-xylulose-5-phosphate synthase TRINITY_DN14967_c0_g1_i3 30.41381572 44.06335556 16.76427587 0.380458448 -1.394189197 0.003200524 0.014441489 Down 2.783354 3.335669 3.36963 0.7742211 0.9938629 1.15766 PIN11426.1 MADS box transcription factor [Handroanthus impetiginosus] Q38841|AGL12_ARATH Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana OX=3702 GN=AGL12 PE=1 SV=2 -- -- -- -- -- -- KOG0014 MADS box transcription factor [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5068 Transcription factor Molecular Function: RNA polymerase II regulatory region sequence-specific DNA binding (GO:0000977);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: flower development (GO:0009908);|Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);|Biological Process: regulation of growth (GO:0040008);|Biological Process: positive regulation of transcription by RNA polymerase II (GO:0045944);|Molecular Function: protein dimerization activity (GO:0046983);|Biological Process: root development (GO:0048364); "PF00319.17,PF01486.16" SRF-type transcription factor (DNA-binding and dimerisation domain)|K-box region TRINITY_DN14972_c0_g1_i3 20.91964973 41.47706423 0.362235236 0.008733387 -6.839243085 1.84E-12 3.49E-11 Down 3.140842 3.180923 2.788236 0 0.07376231 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14972_c0_g2_i1 16.96893447 33.93786893 0 0 #NAME? 3.85E-11 6.44E-10 Down 5.398151 6.878583 3.663935 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14974_c0_g1_i1 68.74243877 95.7853612 41.69951635 0.435343312 -1.199774536 0.000131476 0.000850637 Down 8.975367 6.677104 7.960448 2.241983 2.850206 3.206275 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14975_c0_g1_i2 38.85384679 14.33023725 63.37745634 4.422638317 2.144907264 6.45E-07 6.37E-06 Up 0.3056509 1.184874 0.560911 2.328177 2.115002 2.896192 XP_011096586.1 peroxisomal (S)-2-hydroxy-acid oxidase [Sesamum indicum] Q9LRR9|GLO1_ARATH (S)-2-hydroxy-acid oxidase GLO1 OS=Arabidopsis thaliana OX=3702 GN=GLO1 PE=1 SV=1 sind:105175735 K11517 HAO (S)-2-hydroxy-acid oxidase ko00630|ko04146 Glyoxylate and dicarboxylate metabolism|Peroxisome KOG0538 Glycolate oxidase [C] METABOLISM Energy production and conversion C COG1304 "Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) (By similarity)" Cellular Component: nucleus (GO:0005634);|Cellular Component: peroxisome (GO:0005777);|Molecular Function: glycolate oxidase activity (GO:0008891);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: response to cytokinin (GO:0009735);|Biological Process: oxidative photosynthetic carbon pathway (GO:0009854);|Molecular Function: FMN binding (GO:0010181);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic ribosome (GO:0022626);|Biological Process: defense response to bacterium (GO:0042742);|Cellular Component: apoplast (GO:0048046);|Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);|Molecular Function: very-long-chain-(S)-2-hydroxy-acid oxidase activity (GO:0052852);|Molecular Function: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity (GO:0052853);|Molecular Function: medium-chain-(S)-2-hydroxy-acid oxidase activity (GO:0052854); "PF01070.17,PF00478.24,PF03060.14" FMN-dependent dehydrogenase|IMP dehydrogenase / GMP reductase domain|Nitronate monooxygenase TRINITY_DN1497_c0_g1_i1 23.12902601 36.97682861 9.281223419 0.251001067 -1.9942346 0.000364592 0.002130527 Down 4.660486 3.727245 5.870819 0.7445043 1.083414 1.03399 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN14981_c0_g1_i2 254.9537839 117.5465838 392.3609841 3.337919073 1.738948977 2.66E-24 1.12E-22 Up 13.57526 17.77956 15.63812 40.27686 43.1806 43.07574 XP_020551415.1 snakin-2-like [Sesamum indicum] Q93X17|SNAK2_SOLTU Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YWQ9 gast1 protein homolog 1 Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Biological Process: defense response (GO:0006952); PF02704.13 Gibberellin regulated protein TRINITY_DN14985_c0_g1_i1 9.336238402 1.968312365 16.70416444 8.486541433 3.085176724 0.002548987 0.011867298 Up 0 0 1.000736 2.181919 2.524837 2.281632 XP_011073528.1 ammonium transporter 3 member 1-like [Sesamum indicum] Q9M6N7|AMT2_ARATH Ammonium transporter 2 OS=Arabidopsis thaliana OX=3702 GN=AMT2 PE=1 SV=2 sind:105158457 K03320 "amt, AMT, MEP" "ammonium transporter, Amt family" -- -- KOG0682 Ammonia permease [P] METABOLISM Inorganic ion transport and metabolism P COG0004 ammonium Transporter Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to nematode (GO:0009624);|Molecular Function: high-affinity secondary active ammonium transmembrane transporter activity (GO:0015398);|Biological Process: ammonium transport (GO:0015696);|Cellular Component: integral component of membrane (GO:0016021); PF00909.20 Ammonium Transporter Family TRINITY_DN14990_c0_g1_i1 15.40285566 30.07069296 0.735018369 0.024443014 -5.354433999 2.27E-08 2.74E-07 Down 4.817263 4.355254 5.555575 0.2846143 0 3.01E-73 XP_018502141.1 PREDICTED: uncharacterized protein LOC108867004 [Pyrus x bretschneideri] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN14991_c0_g1_i1 17.63489283 25.47200312 9.797782536 0.384649079 -1.378385242 0.025429165 0.082336712 Down 2.988767 2.685002 3.524939 0.5339597 0.6417886 1.665522 XP_012846678.1 PREDICTED: BTB/POZ domain-containing protein At3g49900 isoform X1 [Erythranthe guttata] Q9M2W8|Y3990_ARATH BTB/POZ domain-containing protein At3g49900 OS=Arabidopsis thaliana OX=3702 GN=At3g49900 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGPF BTB POZ domain-containing protein Biological Process: protein ubiquitination (GO:0016567); PF03000.13 NPH3 family TRINITY_DN14999_c0_g1_i2 15.99502522 6.32716355 25.6628869 4.055986019 2.020052679 0.002981614 0.013584702 Up 1.068826 0.3831397 0.9218085 3.510769 1.622225 2.429712 PIN04636.1 hypothetical protein CDL12_22825 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YPGG long cell-linked locus protein -- PF05553.10 Cotton fibre expressed protein TRINITY_DN15000_c0_g2_i1 22.54959132 31.41102497 13.68815768 0.435775582 -1.198342736 0.033558325 0.103317972 Down 4.222664 3.123346 3.079627 0.4543707 2.014875 1.139948 PNT47014.1 "hypothetical protein POPTR_002G001500v3, partial [Populus trichocarpa]" -- -- -- -- -- -- -- -- KOG3267 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown -- -- -- -- -- -- TRINITY_DN15005_c0_g1_i1 30.54522872 17.72845553 43.36200191 2.44589845 1.290364507 0.006590343 0.026808447 Up 1.411735 2.585644 2.439568 4.590512 4.424129 3.674363 XP_022859210.1 cytochrome b-c1 complex subunit 8 [Olea europaea var. sylvestris] P46269|QCR8_SOLTU Cytochrome b-c1 complex subunit 8 OS=Solanum tuberosum OX=4113 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- O ENOG410XZ33 Protein of unknown function (DUF2741) Cellular Component: mitochondrial inner membrane (GO:0005743);|Molecular Function: ubiquinol-cytochrome-c reductase activity (GO:0008121);|Cellular Component: respiratory chain (GO:0070469); -- -- TRINITY_DN15006_c0_g1_i1 19.51112939 27.88802691 11.13423187 0.399247745 -1.324643834 0.029182838 0.092152803 Down 3.456209 3.289248 2.75824 0.5703973 1.367887 1.01774 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15008_c0_g1_i2 142.7231646 56.02097177 229.4253574 4.095347692 2.033985941 1.02E-19 3.28E-18 Up 4.99618 4.237202 3.204274 13.19089 14.55197 13.40479 XP_006484154.1 probable WRKY transcription factor 75 [Citrus sinensis] Q9FYA2|WRK75_ARATH Probable WRKY transcription factor 75 OS=Arabidopsis thaliana OX=3702 GN=WRKY75 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YM5M WRKY Biological Process: negative regulation of transcription by RNA polymerase II (GO:0000122);|Molecular Function: RNA polymerase II proximal promoter sequence-specific DNA binding (GO:0000978);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: atrichoblast differentiation (GO:0010055);|Biological Process: regulation of response to nutrient levels (GO:0032107);|Biological Process: regulation of DNA-templated transcription in response to stress (GO:0043620);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: lateral root development (GO:0048527); PF03106.14 WRKY DNA -binding domain TRINITY_DN15017_c0_g1_i2 94.35977508 55.05105569 133.6684945 2.42808231 1.279817329 1.74E-06 1.60E-05 Up 7.276234 4.777663 6.427041 13.85092 10.84713 11.32537 PIN21396.1 hypothetical protein CDL12_05899 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111C1X NA -- -- -- TRINITY_DN15024_c0_g1_i2 34.84670189 50.34883235 19.34457143 0.384210925 -1.380029554 0.001967314 0.009487124 Down 4.779789 4.746166 4.524042 1.289033 1.466553 1.556681 XP_011089696.1 dirigent protein 22-like [Sesamum indicum] Q9C523|DIR19_ARATH Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGJA Disease resistance response protein Cellular Component: apoplast (GO:0048046); PF03018.13 Dirigent-like protein TRINITY_DN15025_c0_g1_i10 36.61240364 72.48978891 0.735018369 0.010139612 -6.623853673 6.51E-21 2.26E-19 Down 3.133278 3.780633 3.636539 0.08149862 2.37E-102 5.88E-69 PIN09321.1 Beta-galactosidase [Handroanthus impetiginosus] Q93Z24|BGA17_ARATH Beta-galactosidase 17 OS=Arabidopsis thaliana OX=3702 GN=BGAL17 PE=2 SV=1 sind:105157758 K12309 "GLB1, ELNR1" beta-galactosidase ko00604|ko00511|ko00052|ko00600|ko00531 Glycosphingolipid biosynthesis - ganglio series|Other glycan degradation|Galactose metabolism|Sphingolipid metabolism|Glycosaminoglycan degradation KOG0496 Beta-galactosidase [G] METABOLISM Carbohydrate transport and metabolism -- -- -- Molecular Function: beta-galactosidase activity (GO:0004565);|Cellular Component: vacuole (GO:0005773);|Biological Process: carbohydrate metabolic process (GO:0005975);|Cellular Component: apoplast (GO:0048046); -- -- TRINITY_DN15029_c0_g1_i1 29.94650753 12.08067998 47.81233507 3.957751975 1.984681204 0.009966808 0.037945173 Up 0 3.172871 3.165133 8.07073 8.995057 3.238143 XP_012836072.1 PREDICTED: E3 ubiquitin-protein ligase UPL7 isoform X1 [Erythranthe guttata] Q9SCQ2|UPL7_ARATH E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana OX=3702 GN=UPL7 PE=2 SV=1 pxb:103964427 K10588 UBE3B ubiquitin-protein ligase E3 B ko04120 Ubiquitin mediated proteolysis KOG4427 E3 ubiquitin protein ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG5021 ubiquitin protein ligase Biological Process: protein polyubiquitination (GO:0000209);|Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);|Molecular Function: ubiquitin conjugating enzyme activity (GO:0061631); PF00632.24 HECT-domain (ubiquitin-transferase) TRINITY_DN15035_c0_g1_i2 12.07289259 18.60995362 5.535831559 0.297466166 -1.749202508 0.033522694 0.103235797 Down 5.067841 3.977649 1.751519 0.9624974 0.9728862 0.5232079 XP_012833871.1 PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Erythranthe guttata] Q4PCY0|CWC22_USTMA Pre-mRNA-splicing factor CWC22 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=CWC22 PE=3 SV=2 sind:105169944 K13100 CWC22 pre-mRNA-splicing factor CWC22 -- -- KOG2140 Uncharacterized conserved protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410XNP2 pre-mRNA-splicing factor cwc-22 "Biological Process: mRNA splicing, via spliceosome (GO:0000398);|Molecular Function: RNA binding (GO:0003723);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: U2-type catalytic step 1 spliceosome (GO:0071006);|Cellular Component: catalytic step 2 spliceosome (GO:0071013);" -- -- TRINITY_DN15039_c0_g1_i1 36.0672598 51.00317308 21.13134651 0.41431435 -1.271202305 0.009995137 0.038027765 Down 6.060644 3.745811 4.76566 1.891571 0.2690192 2.810213 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15051_c0_g1_i4 19.33621469 29.84237968 8.830049688 0.295889597 -1.756869122 0.003901802 0.017109204 Down 1.450368 3.038993 2.952521 0.6088738 0.8531094 0.2898739 XP_011087060.1 uncharacterized protein LOC105168623 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG1520 "Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (By similarity)" -- PF13570.5 PQQ-like domain TRINITY_DN15063_c1_g1_i1 27.29151508 37.00007138 17.58295879 0.475214186 -1.073350192 0.032662591 0.101108361 Down 2.552225 1.701444 1.802864 0.5611706 0.6919789 1.066805 XP_011099523.1 uncharacterized protein LOC105177919 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41116B0 Octicosapeptide Phox Bem1p -- -- -- TRINITY_DN15066_c0_g1_i1 61.64810375 96.22375462 27.07245288 0.281348956 -1.829567486 1.05E-07 1.15E-06 Down 3.192665 3.140919 2.745747 0.8324088 0.6398225 0.5995195 CAN74303.1 hypothetical protein VITISV_032980 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN15068_c0_g1_i4 820.8254486 1530.600815 111.0500821 0.072553262 -3.784815709 6.16E-209 4.82E-206 Down 22.93366 23.47668 22.07641 1.433062 1.274532 1.304506 CAN79884.1 hypothetical protein VITISV_002539 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF00665.25,PF13976.5,PF07727.13" Integrase core domain|GAG-pre-integrase domain|Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN15069_c0_g1_i2 98.00484999 50.88567998 145.12402 2.851961889 1.511954703 1.33E-08 1.66E-07 Up 2.771951 3.958878 3.405965 7.749645 7.206738 8.482351 XP_012830203.1 PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like [Erythranthe guttata] Q9FVJ3|AGD12_ARATH ADP-ribosylation factor GTPase-activating protein AGD12 OS=Arabidopsis thaliana OX=3702 GN=AGD12 PE=1 SV=1 sind:105167260 K12486 SMAP stromal membrane-associated protein ko04144 Endocytosis KOG1030 Predicted Ca2+-dependent phospholipid-binding protein [R] POORLY CHARACTERIZED General function prediction only U COG5347 "domain, ankyrin repeat and PH domain" Molecular Function: GTPase activator activity (GO:0005096);|Molecular Function: phospholipid binding (GO:0005543);|Cellular Component: vacuole (GO:0005773);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: intracellular protein transport (GO:0006886);|Molecular Function: metal ion binding (GO:0046872); PF00168.29 C2 domain TRINITY_DN15070_c0_g1_i4 34.12151964 50.84287212 17.40016717 0.342234151 -1.546944364 0.000807666 0.004323397 Down 2.876089 3.295857 2.142691 1.063858 0.6494202 0.561664 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15078_c0_g1_i1 383.4761582 207.4526162 559.4997002 2.696999972 1.431355507 1.60E-23 6.43E-22 Up 14.27869 17.92102 20.926 35.94594 37.81252 41.79354 EPS57497.1 "hypothetical protein M569_17319, partial [Genlisea aurea]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111VYF NA -- -- -- TRINITY_DN15082_c0_g1_i1 26.66086251 39.02243647 14.29928856 0.366437615 -1.44836049 0.004583545 0.019687816 Down 3.637608 5.121842 3.456886 1.141657 0.5538386 1.989286 PSS04188.1 Puromycin-sensitive aminopeptidase [Actinidia chinensis var. chinensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15084_c0_g1_i3 44.71817949 23.3538289 66.08253008 2.829622944 1.500609822 0.001192957 0.006101624 Up 1.64981 2.549523 1.418206 2.657816 4.438216 5.647605 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15086_c0_g1_i1 13.37803666 20.29434118 6.461732133 0.318400685 -1.651084655 0.023320862 0.076721545 Down 2.003605 1.749981 1.961492 0.3331794 0.1115357 1.059159 XP_011088328.1 uncharacterized protein LOC105169600 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y2WM Ternary complex factor MIP1 -- -- -- TRINITY_DN15091_c0_g1_i2 46.10922863 21.50945572 70.70900155 3.287344993 1.716922869 1.15E-05 9.21E-05 Up 0.6190627 0.9766624 0.8966088 2.287697 1.950928 2.367693 XP_011088865.2 LOW QUALITY PROTEIN: cytochrome P450 94C1 [Sesamum indicum] Q9ZUX1|C94C1_ARATH Cytochrome P450 94C1 OS=Arabidopsis thaliana OX=3702 GN=CYP94C1 PE=1 SV=1 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: response to wounding (GO:0009611);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: alkane 1-monooxygenase activity (GO:0018685);|Molecular Function: heme binding (GO:0020037);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231); PF00067.21 Cytochrome P450 TRINITY_DN15102_c0_g1_i1 20.90946399 9.050197724 32.76873026 3.620775066 1.856298555 0.005362383 0.0224981 Up 0.3615257 1.113002 1.016516 2.310552 3.475734 1.404958 PIN26148.1 hypothetical protein CDL12_01103 [Handroanthus impetiginosus] Q6X7J9|WOX4_ARATH WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YND1 homeobox Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: signal transduction (GO:0007165);|Biological Process: procambium histogenesis (GO:0010067);|Biological Process: phloem or xylem histogenesis (GO:0010087);|Biological Process: cell division (GO:0051301); PF00046.28 Homeobox domain TRINITY_DN15105_c0_g1_i1 44.64826061 10.53995388 78.75656733 7.472192781 2.901531677 1.54E-11 2.68E-10 Up 0.3635299 0.8784407 1.215446 4.403255 5.419717 5.143517 PIN23191.1 hypothetical protein CDL12_04088 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YJN4 NA -- PF14009.5 Domain of unknown function (DUF4228) TRINITY_DN15108_c0_g1_i2 81.99634278 118.0113725 45.98131311 0.389634593 -1.359806324 3.71E-06 3.24E-05 Down 14.47909 13.54037 11.48609 4.004958 4.606332 3.775792 PIN26053.1 Histone 2A [Handroanthus impetiginosus] O65759|H2AX_CICAR Histone H2AX OS=Cicer arietinum OX=3827 GN=HIS2A PE=2 SV=1 -- -- -- -- -- -- KOG1756 Histone 2A [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics B COG5262 histone h2a Cellular Component: nucleosome (GO:0000786);|Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Molecular Function: protein heterodimerization activity (GO:0046982); "PF16211.4,PF00125.23" C-terminus of histone H2A|Core histone H2A/H2B/H3/H4 TRINITY_DN15109_c0_g1_i1 10.47901605 17.48593698 3.47209512 0.198565003 -2.332316727 0.010359795 0.039201583 Down 3.355829 4.86901 1.751324 0 0 1.676111 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15109_c2_g1_i1 8.291244345 14.70065318 1.881835511 0.128010333 -2.965667824 0.004080116 0.017803395 Down 2.182414 1.880567 3.089118 0 0.2388494 0.4922455 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15111_c0_g5_i1 26.35146251 37.3664943 15.33643073 0.410432689 -1.284782456 0.013921237 0.050240637 Down 3.981168 8.318891 9.756721 2.836643 1.428063 3.265476 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15117_c0_g1_i2 70.63911234 107.1742524 34.10397229 0.318210499 -1.65194666 1.61E-07 1.73E-06 Down 4.075648 3.989625 4.487658 0.9438557 1.309195 1.002975 PIN19715.1 hypothetical protein CDL12_07599 [Handroanthus impetiginosus] A1L4X0|CLT2_ARATH "Protein CLT2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLT2 PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG4111Y30 crt homolog 1-like Biological Process: defense response to oomycetes (GO:0002229);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid (GO:0009536);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: chloroplast membrane (GO:0031969);|Biological Process: glutathione transport (GO:0034635);|Biological Process: response to cadmium ion (GO:0046686); PF08627.9 "CRT-like, chloroquine-resistance transporter-like" TRINITY_DN15125_c0_g1_i1 3524.767917 7049.535835 0 0 #NAME? 0 0 Down 120.1627 118.3407 120.3336 0 0 0 XP_016461127.1 PREDICTED: uncharacterized protein LOC107784497 [Nicotiana tabacum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15133_c0_g1_i2 25.37629064 12.47277988 38.2798014 3.069067342 1.617800302 0.001965625 0.009480414 Up 1.228918 1.181424 1.246323 2.826594 3.18862 3.262222 XP_022865493.1 protein YLS3-like [Olea europaea var. sylvestris] O64864|YLS3_ARATH Protein YLS3 OS=Arabidopsis thaliana OX=3702 GN=YLS3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YR9F Non-specific lipid-transfer protein-like protein Cellular Component: plasma membrane (GO:0005886);|Biological Process: lipid transport (GO:0006869);|Molecular Function: lipid binding (GO:0008289);|Cellular Component: anchored component of membrane (GO:0031225); "PF14368.5,PF00234.21" Probable lipid transfer|Protease inhibitor/seed storage/LTP family TRINITY_DN15135_c0_g1_i2 157.8490478 215.5266965 100.1713992 0.464774902 -1.105395931 1.66E-07 1.78E-06 Down 16.63807 18.39512 14.66949 5.400845 6.114413 7.139798 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15143_c0_g1_i1 191.0728991 105.5126699 276.6331283 2.621800098 1.39055769 3.25E-13 6.53E-12 Up 9.631836 9.906339 8.521378 18.03567 20.22865 21.09763 PIM99644.1 "putative protein, induced by hypoxia [Handroanthus impetiginosus]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y8QT Hypoxia-responsive family -- PF04588.12 Hypoxia induced protein conserved region TRINITY_DN15148_c0_g1_i1 24.66084115 34.80920843 14.51247386 0.416914791 -1.262175538 0.017891209 0.061768761 Down 2.454664 4.268637 2.710141 1.215561 0.8364824 1.127533 XP_011091443.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Sesamum indicum] Q9SD84|PDCB2_ARATH PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YPJP "glucan endo-1,3-beta-glucosidase" Molecular Function: (1->3)-beta-D-glucan binding (GO:0001872);|Biological Process: response to heat (GO:0009408);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: polysaccharide binding (GO:0030247);|Cellular Component: anchored component of membrane (GO:0031225);|Cellular Component: anchored component of plasma membrane (GO:0046658); PF07983.12 X8 domain TRINITY_DN15150_c0_g1_i2 72.52409505 35.06568658 109.9825035 3.136470842 1.649142151 8.42E-08 9.38E-07 Up 2.898485 3.112799 2.997028 7.757124 8.64738 6.438559 PIN06640.1 Calmodulin and related proteins (EF-Hand superfamily) [Handroanthus impetiginosus] Q93Z27|CML46_ARATH Probable calcium-binding protein CML46 OS=Arabidopsis thaliana OX=3702 GN=CML46 PE=1 SV=1 -- -- -- -- -- -- KOG0027 Calmodulin and related proteins (EF-Hand superfamily) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms DTZ COG5126 Calcium-binding protein Molecular Function: calcium ion binding (GO:0005509); "PF13833.5,PF00036.31,PF13405.5,PF13499.5,PF13202.5" EF-hand domain pair|EF hand|EF-hand domain|EF-hand domain pair|EF hand TRINITY_DN15151_c0_g1_i3 44.78103082 63.06257198 26.49948966 0.420209465 -1.250819435 0.0011049 0.005702865 Down 5.193021 6.347171 6.868812 1.957387 1.66764 2.6214 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15153_c0_g1_i2 177.3343763 236.6841803 117.9845724 0.498489473 -1.004365055 4.32E-07 4.37E-06 Down 7.568262 9.821013 8.080717 3.193528 3.788904 3.263071 XP_011099674.1 amino acid permease 2-like [Sesamum indicum] Q39134|AAP3_ARATH Amino acid permease 3 OS=Arabidopsis thaliana OX=3702 GN=AAP3 PE=1 SV=2 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Molecular Function: symporter activity (GO:0015293);|Biological Process: basic amino acid transport (GO:0015802);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: nuclear membrane (GO:0031965); PF01490.17 Transmembrane amino acid transporter protein TRINITY_DN15159_c0_g1_i3 67.39581367 117.866187 16.92544032 0.143598777 -2.799884631 2.26E-15 5.37E-14 Down 12.96488 10.4695 9.093482 1.858608 1.381563 0.5223695 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15162_c0_g2_i1 37.72279503 67.98363341 7.46195666 0.109761075 -3.187561583 0.000397198 0.002301801 Down 5.699633 8.368932 15.55307 0.1828382 1.240966 1.258717 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15178_c0_g1_i4 964.5325548 479.3943461 1449.670763 3.023962997 1.596440486 3.81E-59 5.23E-57 Up 33.89184 37.23068 33.78355 83.70899 82.89205 89.45183 XP_011071221.1 "flavonoid 3',5'-methyltransferase [Sesamum indicum]" C7AE94|FAOMT_VITVI "Flavonoid 3',5'-methyltransferase OS=Vitis vinifera OX=29760 GN=FAOMT PE=1 SV=1" -- -- -- -- -- -- KOG1663 O-methyltransferase [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " S COG4122 O-methyltransferase Cellular Component: cytoplasm (GO:0005737);|Molecular Function: O-methyltransferase activity (GO:0008171);|Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);|Biological Process: cyanidin 3-O-glucoside biosynthetic process (GO:0033485);|Biological Process: delphinidin 3-O-glucoside biosynthetic process (GO:0033486);|Biological Process: pigmentation (GO:0043473);|Molecular Function: metal ion binding (GO:0046872); "PF01596.16,PF13578.5" O-methyltransferase|Methyltransferase domain TRINITY_DN15180_c0_g1_i1 56.14534457 33.21863349 79.07205566 2.380352451 1.251175205 0.000301965 0.001802379 Up 1.962452 2.103878 2.14761 4.022266 4.107446 3.889791 XP_011070903.1 cytosolic sulfotransferase 12-like [Sesamum indicum] P52839|SOT12_ARATH Cytosolic sulfotransferase 12 OS=Arabidopsis thaliana OX=3702 GN=SOT12 PE=1 SV=2 -- -- -- -- -- -- KOG1584 Sulfotransferase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111H56 Sulfotransferase Cellular Component: Golgi apparatus (GO:0005794);|Biological Process: defense response (GO:0006952);|Molecular Function: sulfotransferase activity (GO:0008146);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: brassinosteroid metabolic process (GO:0016131);|Molecular Function: brassinosteroid sulfotransferase activity (GO:0080118);|Molecular Function: flavonoid sulfotransferase activity (GO:1990135); "PF00685.26,PF13469.5" Sulfotransferase domain|Sulfotransferase family TRINITY_DN15181_c1_g1_i5 67.57207496 105.3110672 29.83308274 0.283285352 -1.819672089 0.000305508 0.001821135 Down 8.933296 4.150718 7.965913 1.635891 1.267509 1.88698 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15182_c0_g1_i1 265.6514657 92.96184148 438.3410899 4.715279763 2.23734337 4.82E-39 3.75E-37 Up 4.561641 6.306365 4.316431 18.34811 19.25762 20.37314 PIN15750.1 Peroxidase [Handroanthus impetiginosus] P22195|PER1_ARAHY Cationic peroxidase 1 OS=Arachis hypogaea OX=3818 GN=PNC1 PE=1 SV=2 sind:105174640 K00430 E1.11.1.7 peroxidase ko00940 Phenylpropanoid biosynthesis -- -- -- -- -- G ENOG410YAKJ peroxidase Molecular Function: peroxidase activity (GO:0004601);|Cellular Component: extracellular region (GO:0005576);|Biological Process: response to oxidative stress (GO:0006979);|Molecular Function: heme binding (GO:0020037);|Biological Process: hydrogen peroxide catabolic process (GO:0042744);|Molecular Function: metal ion binding (GO:0046872); PF00141.22 Peroxidase TRINITY_DN15183_c0_g1_i2 66.59717211 12.90768764 120.2866566 9.318993451 3.220174137 3.16E-19 9.85E-18 Up 0.4859676 0.1953096 0.6074679 3.245286 3.216729 3.08025 XP_019451939.1 PREDICTED: uncharacterized protein LOC109354042 [Lupinus angustifolius] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15185_c0_g1_i1 29.45758073 15.57707197 43.33808948 2.782171744 1.47621148 0.002194044 0.01041563 Up 0.7660775 0.5301086 0.7395909 1.303374 1.898232 1.356326 XP_012854401.1 PREDICTED: putative disease resistance protein RGA4 [Erythranthe guttata] Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Biological Process: defense response (GO:0006952);|Molecular Function: ADP binding (GO:0043531); "PF00931.21,PF13191.5" NB-ARC domain|AAA ATPase domain TRINITY_DN15189_c0_g2_i1 57.15320285 4.358851185 109.9475545 25.22397527 4.656723756 5.83E-27 2.85E-25 Up 0.7677554 0.2468488 0.1290619 8.320878 7.625017 7.751626 XP_020554502.1 pathogen-related protein-like [Sesamum indicum] P16273|PRPX_HORVU Pathogen-related protein OS=Hordeum vulgare OX=4513 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YA3P NA Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607); -- -- TRINITY_DN15193_c0_g1_i2 38.48886972 57.91419602 19.06354343 0.329168749 -1.603100723 0.000120338 0.000783944 Down 3.367932 5.346963 6.376734 1.355613 0.9407593 1.755207 PKA65558.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Apostasia shenzhenica] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN15194_c0_g1_i4 69.22927663 34.47851757 103.9800357 3.015791948 1.592536904 2.03E-06 1.85E-05 Up 2.090949 6.667107 5.280191 12.35406 12.83054 9.088161 PIN22916.1 hypothetical protein CDL12_04353 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG411173Q Avr9 Cf-9 rapidly elicited protein 65 -- -- -- TRINITY_DN15194_c0_g2_i1 75.48709004 41.5523105 109.4218696 2.633352231 1.396900506 0.015986414 0.056266672 Up 6.5259 1.344045 9.845551 8.180925 12.84504 16.91535 PIN22916.1 hypothetical protein CDL12_04353 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG411173Q Avr9 Cf-9 rapidly elicited protein 65 -- -- -- TRINITY_DN15194_c0_g3_i1 50.41676704 25.52341076 75.31012332 2.950629288 1.561022674 1.83E-05 0.00014139 Up 4.803034 3.801461 3.58263 7.065308 12.20503 9.672165 PIN22916.1 hypothetical protein CDL12_04353 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15196_c0_g1_i2 79.20908996 48.15956303 110.2586169 2.289443881 1.194997202 3.96E-05 0.000286305 Up 5.972233 4.459083 5.852346 10.76522 11.45147 7.952507 XP_012852650.1 PREDICTED: uncharacterized protein LOC105972260 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XV03 NA -- -- -- TRINITY_DN15198_c0_g1_i1 65.03988821 38.71330721 91.3664692 2.36007915 1.238835244 0.000264536 0.001599371 Up 3.33688 6.551948 11.13509 13.36155 13.48714 13.16769 XP_024933312.1 receptor-like protein EIX2 [Ziziphus jujuba] Q6JN46|EIX2_SOLLC Receptor-like protein EIX2 OS=Solanum lycopersicum OX=4081 GN=EIX2 PE=1 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF13855.5,PF00560.32,PF12799.6" Leucine rich repeat|Leucine Rich Repeat|Leucine Rich repeats (2 copies) TRINITY_DN151_c0_g1_i1 8.138195702 13.29202834 2.984363064 0.224522773 -2.155066311 0.030241367 0.094835673 Down 2.578485 0.9397473 2.007384 0.3978143 0.1966757 0.4389614 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15214_c0_g1_i2 14.39044761 21.37623336 7.404661857 0.346396942 -1.529501903 0.0331087 0.102141038 Down 1.391377 1.387965 1.150579 0.4149169 0.3665268 0.3034699 XP_022881284.1 transcription factor MYB41-like [Olea europaea var. sylvestris] Q8LPH6|MYB86_ARATH Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1 sind:105158961 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of stomatal movement (GO:0010119);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212); "PF00249.30,PF13921.5" Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN15221_c0_g1_i1 11.85626785 18.52066022 5.191875486 0.280328856 -1.834807839 0.020122223 0.068159663 Down 1.385705 1.611785 1.928391 0.412306 0.4156624 0.3645527 PIN04145.1 hypothetical protein CDL12_23320 [Handroanthus impetiginosus] Q6H6S3|HOX24_ORYSJ Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX24 PE=2 SV=1 sind:105156051 K09338 HD-ZIP homeobox-leucine zipper protein -- -- KOG0483 "Transcription factor HEX, contains HOX and HALZ domains" [K] INFORMATION STORAGE AND PROCESSING Transcription K ENOG410Z2UE homeobox-leucine zipper protein Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Molecular Function: sequence-specific DNA binding (GO:0043565); "PF00046.28,PF02183.17" Homeobox domain|Homeobox associated leucine zipper TRINITY_DN15229_c0_g2_i2 17.148859 9.761271087 24.53644692 2.513652853 1.329785421 0.043975094 0.127909871 Up 0.2483956 1.669355 1.5257 2.08573 2.321187 2.383829 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15238_c0_g1_i4 829.0382915 1126.23743 531.8391534 0.472226495 -1.082449108 1.24E-25 5.61E-24 Down 90.40185 95.23294 85.53193 38.4513 32.8785 31.95933 XP_011078493.1 dirigent protein 22-like [Sesamum indicum] Q9FIG6|DIR1_ARATH Dirigent protein 1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGJA Disease resistance response protein Cellular Component: apoplast (GO:0048046); PF03018.13 Dirigent-like protein TRINITY_DN15239_c0_g1_i1 17.28416642 31.9567529 2.611579931 0.081722318 -3.613126059 1.31E-06 1.23E-05 Down 1.672293 1.70724 1.927023 0.05163695 0.1537333 0.1573453 GAU35033.1 hypothetical protein TSUD_103560 [Trifolium subterraneum] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only J COG2147 ribosomal protein L19 Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN15247_c0_g1_i1 30.41338524 0.325611563 60.50115892 185.8077716 7.537667035 3.11E-20 1.03E-18 Up 0.07460759 0 0 2.535123 3.866637 3.261645 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15247_c1_g2_i1 98.20730742 0 196.4146148 Inf Inf 3.65E-67 5.79E-65 Up 2.42E-79 2.78E-103 5.87E-79 7.895254 8.206409 9.064157 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15247_c1_g3_i1 31.5464308 60.16615267 2.926708944 0.048643778 -4.361600922 2.52E-13 5.13E-12 Down 3.335913 4.036591 2.922509 0.04252015 0.2954121 0.05155325 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1525_c0_g1_i1 15.7086513 24.6010665 6.816236104 0.277070756 -1.851673646 0.019598478 0.066704185 Down 3.343894 4.294787 1.42835 0.7782821 0 1.23481 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15270_c0_g1_i3 46.66896082 18.98301463 74.35490701 3.916917753 1.969718835 4.01E-07 4.08E-06 Up 1.87816 2.941325 2.02296 7.150428 7.0367 7.577273 XP_011080908.1 heavy metal-associated isoprenylated plant protein 39 isoform X2 [Sesamum indicum] O03982|HIP39_ARATH Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1 -- -- -- -- -- -- KOG1603 Copper chaperone [P] METABOLISM Inorganic ion transport and metabolism S COG2608 heavy metal transport detoxification protein Biological Process: metal ion transport (GO:0030001);|Molecular Function: metal ion binding (GO:0046872); PF00403.25 Heavy-metal-associated domain TRINITY_DN15271_c0_g1_i2 283.6785615 457.4659726 109.8911504 0.240217102 -2.057589226 5.70E-11 9.32E-10 Down 82.51478 73.07638 52.77766 12.93808 11.99608 15.40421 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15273_c0_g1_i1 31.47284543 47.09431035 15.85138051 0.336588017 -1.570944281 0.01159378 0.043066814 Down 3.224041 1.235675 2.834693 0.5591778 0.9864256 0.4612321 XP_012838161.1 PREDICTED: DNA polymerase epsilon catalytic subunit A [Erythranthe guttata] F4HW04|DPOE1_ARATH DNA polymerase epsilon catalytic subunit A OS=Arabidopsis thaliana OX=3702 GN=POL2A PE=1 SV=1 sind:105171162 K02324 POLE1 DNA polymerase epsilon subunit 1 ko03030|ko03420|ko00230|ko00240|ko03410 DNA replication|Nucleotide excision repair|Purine metabolism|Pyrimidine metabolism|Base excision repair KOG1798 "DNA polymerase epsilon, catalytic subunit A" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG0417 DNA polymerase "Molecular Function: nucleotide binding (GO:0000166);|Biological Process: mitotic cell cycle (GO:0000278);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Biological Process: leading strand elongation (GO:0006272);|Biological Process: base-excision repair, gap-filling (GO:0006287);|Biological Process: nucleotide-excision repair, DNA gap filling (GO:0006297);|Molecular Function: zinc ion binding (GO:0008270);|Molecular Function: single-stranded DNA 3'-5' exodeoxyribonuclease activity (GO:0008310);|Cellular Component: epsilon DNA polymerase complex (GO:0008622);|Biological Process: embryonic root morphogenesis (GO:0010086);|Biological Process: DNA replication proofreading (GO:0045004);|Cellular Component: apoplast (GO:0048046);|Biological Process: negative regulation of long-day photoperiodism, flowering (GO:0048579);|Biological Process: regulation of cell division (GO:0051302);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);" PF08490.11 Domain of unknown function (DUF1744) TRINITY_DN15277_c0_g1_i3 51.52048793 30.19391392 72.84706194 2.412640578 1.270613007 0.000385305 0.002239168 Up 1.930017 2.397292 2.093592 4.575031 4.880667 3.162836 XP_016577197.1 PREDICTED: LOB domain-containing protein 1-like [Capsicum annuum] Q9SK08|LBD11_ARATH LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHTF lob domain-containing protein -- PF03195.13 Lateral organ boundaries (LOB) domain TRINITY_DN15278_c2_g1_i1 92.86240526 174.3404757 11.38433482 0.065299436 -3.936785649 2.26E-32 1.38E-30 Down 6.327865 6.43388 5.64932 0.4846258 0.3804985 0.1120244 Q49SP4.1 RecName: Full=Germacrene D synthase 1; AltName: Full=PatTpsB15 Q49SP4|TPGD1_POGCB Germacrene D synthase 1 OS=Pogostemon cablin OX=28511 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBXH synthase Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: cytosol (GO:0005829);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate metabolic process (GO:0045338);|Biological Process: sesquiterpene biosynthetic process (GO:0051762); "PF03936.15,PF01397.20" "Terpene synthase family, metal binding domain|Terpene synthase, N-terminal domain" TRINITY_DN15281_c0_g1_i5 1054.325395 1717.634835 391.0159555 0.227647896 -2.135123972 9.25E-104 2.43E-101 Down 199.0697 179.9942 198.796 34.78047 33.35306 38.14854 CBI23866.3 "unnamed protein product, partial [Vitis vinifera]" P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YPS7 Basic blue Molecular Function: electron transfer activity (GO:0009055);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN15286_c0_g1_i1 33.33957277 62.63654452 4.042601028 0.064540614 -3.953648892 7.79E-13 1.52E-11 Down 1.820643 2.257572 2.321265 0.3257276 0 0 CAN63563.1 hypothetical protein VITISV_003097 [Vitis vinifera] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); "PF00665.25,PF13976.5,PF14223.5,PF03732.16" Integrase core domain|GAG-pre-integrase domain|gag-polypeptide of LTR copia-type|Retrotransposon gag protein TRINITY_DN1528_c0_g1_i1 35.42633351 67.95478514 2.897881884 0.042644265 -4.551504446 6.76E-12 1.21E-10 Down 11.83466 9.67977 17.0908 0 1.397182 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15290_c0_g1_i1 57.35917192 25.83550044 88.88284341 3.440337593 1.782550141 2.61E-07 2.73E-06 Up 1.960706 1.58782 1.490805 4.3469 4.645294 4.969155 PIN02109.1 hypothetical protein CDL12_25378 [Handroanthus impetiginosus] Q9C7K0|VBF_ARATH F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111AE6 F-box protein Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: carbohydrate binding (GO:0030246); PF14299.5 Phloem protein 2 TRINITY_DN15295_c0_g1_i1 22.2751068 32.28744376 12.26276985 0.37979996 -1.396688341 0.014579113 0.052187499 Down 2.720285 1.887593 1.659645 0.2921244 0.8742036 0.703297 PIN26986.1 Kinesin (SMY1 subfamily) [Handroanthus impetiginosus] F4JDI6|KN12F_ARATH Kinesin-like protein KIN-12F OS=Arabidopsis thaliana OX=3702 GN=KIN12F PE=3 SV=1 sind:105176613 K10400 KIF15 kinesin family member 15 -- -- KOG4280 Kinesin-like protein [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5059 Kinesin family member "Molecular Function: microtubule motor activity (GO:0003777);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: kinesin complex (GO:0005871);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based movement (GO:0007018);|Molecular Function: microtubule binding (GO:0008017);|Molecular Function: ATP-dependent microtubule motor activity, plus-end-directed (GO:0008574);|Molecular Function: ATPase activity (GO:0016887);" "PF00225.22,PF16796.4" Kinesin motor domain|Microtubule binding TRINITY_DN15300_c0_g1_i3 1254.946046 538.7438954 1971.148196 3.65878521 1.871364724 5.77E-94 1.38E-91 Up 57.21072 69.12758 58.79881 183.6975 183.83 178.9831 XP_011084535.1 protein yippee-like At4g27745 [Sesamum indicum] Q2V3E2|YIPL5_ARATH Protein yippee-like At4g27740 OS=Arabidopsis thaliana OX=3702 GN=At4g27740 PE=3 SV=1 -- -- -- -- -- -- KOG3399 Predicted Yippee-type zinc-binding protein [R] POORLY CHARACTERIZED General function prediction only S ENOG4111VJ1 Yippee-like Molecular Function: metal ion binding (GO:0046872); PF03226.13 "Yippee zinc-binding/DNA-binding /Mis18, centromere assembly" TRINITY_DN15317_c0_g1_i3 23.0641619 14.17420982 31.95411399 2.254384152 1.172733375 0.03091143 0.09655674 Up 0.8754015 0.7764351 0.8744602 1.421584 1.598808 1.587942 PIN16448.1 Glutamate-gated kainate-type ion channel receptor subunit GluR5 [Handroanthus impetiginosus] Q93YT1|GLR32_ARATH Glutamate receptor 3.2 OS=Arabidopsis thaliana OX=3702 GN=GLR3.2 PE=1 SV=2 -- -- -- -- -- -- KOG1052 Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [PET] METABOLISM|METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Amino acid transport and metabolism |Signal transduction mechanisms S ENOG410XQQV glutamate receptor Molecular Function: ionotropic glutamate receptor activity (GO:0004970);|Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: intracellular (GO:0005622);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: calcium ion transport (GO:0006816);|Molecular Function: glutamate receptor activity (GO:0008066);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: calcium-mediated signaling (GO:0019722);|Biological Process: cellular response to amino acid stimulus (GO:0071230); PF00060.25 Ligand-gated ion channel TRINITY_DN15317_c0_g3_i1 11.04602699 5.275397933 16.81665605 3.187751191 1.672539029 0.03903615 0.116331931 Up 0.453572 0.8673111 0.4470512 1.239744 1.223452 1.954476 XP_011083927.1 glutamate receptor 2.7-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XQQV glutamate receptor -- PF01094.27 Receptor family ligand binding region TRINITY_DN15321_c0_g1_i1 336.6635048 168.9181763 504.4088334 2.986113421 1.578268964 9.96E-26 4.52E-24 Up 9.139898 10.16721 10.54588 23.51295 24.38682 23.91479 XP_012839306.1 PREDICTED: uncharacterized protein LOC105959717 isoform X1 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15323_c0_g1_i1 38.81452412 7.363848476 70.26519976 9.541912764 3.254278497 4.56E-12 8.32E-11 Up 1.214312 0.7172748 1.519311 7.673983 9.398454 9.577651 PIM99414.1 hypothetical protein CDL12_28101 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG0001 Ubiquitin and ubiquitin-like proteins [OR] CELLULAR PROCESSES AND SIGNALING|POORLY CHARACTERIZED "Posttranslational modification, protein turnover, chaperones |General function prediction only " -- -- -- -- -- -- TRINITY_DN15336_c0_g3_i1 5.678507018 9.892251247 1.464762789 0.148071733 -2.755631836 0.035048124 0.106946302 Down 0.9961626 1.602022 0.6550912 0.3191257 0.105839 0.000522965 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15341_c0_g1_i1 56.42220723 18.60643313 94.23798134 5.064806386 2.34050712 9.72E-11 1.55E-09 Up 1.79755 1.45421 1.575416 5.951599 7.335345 6.26954 XP_011070581.1 "nudix hydrolase 17, mitochondrial [Sesamum indicum]" Q9ZU95|NUD17_ARATH "Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT17 PE=2 SV=1" sind:105156206 K07766 E3.6.1.52 diphosphoinositol-polyphosphate diphosphatase -- -- KOG2839 Diadenosine and diphosphoinositol polyphosphate phosphohydrolase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms L COG0494 Nudix hydrolase Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: mitochondrion (GO:0005739);|Molecular Function: hydrolase activity (GO:0016787);|Molecular Function: metal ion binding (GO:0046872); PF00293.27 NUDIX domain TRINITY_DN15342_c0_g1_i1 34.135374 50.15420094 18.11654706 0.361216941 -1.469062537 0.001416989 0.007108122 Down 3.828363 3.449436 2.720549 0.9324379 1.24414 0.7726877 PIN05544.1 hypothetical protein CDL12_21910 [Handroanthus impetiginosus] Q6YXH5|ZHD1_ORYSJ Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YEN7 ZF-HD homeobox protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Molecular Function: metal ion binding (GO:0046872); PF04770.11 ZF-HD protein dimerisation region TRINITY_DN15345_c0_g1_i1 219.8386745 141.6570087 298.0203404 2.103816417 1.073008818 3.14E-09 4.22E-08 Up 9.940781 11.3277 12.98188 17.67002 20.34897 20.06073 PIN21635.1 "Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit [Handroanthus impetiginosus]" O80800|ACPM2_ARATH "Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 PE=1 SV=1" sind:105166870 K03955 NDUFAB1 NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1 ko00190 Oxidative phosphorylation KOG1748 "Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit" [CIQ] METABOLISM|METABOLISM|METABOLISM "Energy production and conversion |Lipid transport and metabolism |Secondary metabolites biosynthesis, transport and catabolism " I COG0236 Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity) Molecular Function: acyl binding (GO:0000035);|Molecular Function: acyl carrier activity (GO:0000036);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial matrix (GO:0005759);|Cellular Component: cytosol (GO:0005829);|Biological Process: lipid A biosynthetic process (GO:0009245);|Molecular Function: phosphopantetheine binding (GO:0031177);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: cobalt ion binding (GO:0050897);|Biological Process: oxidation-reduction process (GO:0055114);|Cellular Component: respiratory chain (GO:0070469); PF00550.24 Phosphopantetheine attachment site TRINITY_DN15354_c0_g1_i3 38.19724101 57.70408104 18.69040098 0.323900851 -1.626375835 0.000317649 0.001884349 Down 4.429004 5.481853 7.83585 0.6807149 1.818015 2.247565 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15364_c0_g1_i3 46.94045282 73.66281381 20.21809183 0.27446809 -1.865289664 1.43E-06 1.34E-05 Down 6.768766 7.268966 8.460198 1.122661 1.400342 2.416359 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15367_c0_g1_i1 60.58560306 96.94707159 24.22413454 0.249869688 -2.000752198 6.22E-09 8.05E-08 Down 7.351303 8.92127 9.99723 2.084129 1.236802 1.995327 XP_016688206.1 "PREDICTED: small heat shock protein, chloroplastic-like [Gossypium hirsutum]" P09886|HS21C_PEA "Small heat shock protein, chloroplastic OS=Pisum sativum OX=3888 GN=HSP21 PE=2 SV=1" sind:105166778 K13993 HSP20 HSP20 family protein ko04141 Protein processing in endoplasmic reticulum KOG0710 Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0071 response to heat Cellular Component: chloroplast (GO:0009507); PF00011.20 Hsp20/alpha crystallin family TRINITY_DN15369_c0_g1_i1 75.27427637 132.3585297 18.19002302 0.137429927 -2.863231897 6.72E-18 1.93E-16 Down 18.66993 17.74005 19.36044 2.615613 1.721938 1.895419 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15369_c0_g2_i4 15.74818009 31.49636017 0 0 #NAME? 1.83E-10 2.84E-09 Down 3.623356 3.948609 3.487435 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15381_c0_g1_i1 42.54480792 13.66705104 71.4225648 5.225894351 2.385677959 1.18E-08 1.47E-07 Up 0.702285 1.554903 0.9777584 3.90349 4.6908 5.010196 XP_011075003.1 uncharacterized protein LOC105159589 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03087.13 Arabidopsis protein of unknown function TRINITY_DN15385_c0_g1_i2 96.88310618 145.1233965 48.6428159 0.335182452 -1.576981473 6.76E-09 8.71E-08 Down 7.596794 7.277057 6.440277 2.045031 1.881481 1.873847 PIN17016.1 putative alkaloid synthase/Surface mucin Hemomucin [Handroanthus impetiginosus] Q4V3D9|SSL10_ARATH Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=SSL10 PE=2 SV=1 -- -- -- -- -- -- KOG1520 Predicted alkaloid synthase/Surface mucin Hemomucin [R] POORLY CHARACTERIZED General function prediction only G COG3386 SMP-30 gluconolaconase LRE domain protein Cellular Component: vacuole (GO:0005773);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: biosynthetic process (GO:0009058);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020); "PF03088.15,PF08450.11" Strictosidine synthase|SMP-30/Gluconolaconase/LRE-like region TRINITY_DN15389_c0_g1_i1 23.03632033 33.47047005 12.60217061 0.376516093 -1.409216566 0.037141928 0.111824867 Down 6.700595 3.007551 7.36568 3.451254 0.5785339 1.12655 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15390_c0_g1_i1 6.648713627 11.36848552 1.928941734 0.169674468 -2.559158604 0.024052026 0.0786935 Down 1.600158 2.686255 1.833705 0 0 0.8108917 XP_011081805.1 cytosolic sulfotransferase 15 [Sesamum indicum] Q8GZ53|SOT14_ARATH Cytosolic sulfotransferase 14 OS=Arabidopsis thaliana OX=3702 GN=SOT14 PE=2 SV=1 -- -- -- -- -- -- KOG1584 Sulfotransferase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111H56 Sulfotransferase Cellular Component: cytoplasm (GO:0005737);|Molecular Function: sulfotransferase activity (GO:0008146); PF00685.26 Sulfotransferase domain TRINITY_DN15392_c0_g2_i1 7.647933089 13.36692444 1.928941734 0.144307072 -2.792786088 0.030754485 0.096182375 Down 0.9676818 4.789022 2.316059 0 0 0.928587 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15395_c0_g2_i1 49.88848131 23.05566399 76.72129863 3.327655133 1.734505925 0.00019577 0.001218992 Up 1.314587 3.318022 0.4751187 3.273676 5.004065 5.474376 XP_022854704.1 acid phosphatase 1-like [Olea europaea var. sylvestris] P27061|PPA1_SOLLC Acid phosphatase 1 OS=Solanum lycopersicum OX=4081 GN=APS1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111X3R Acid phosphatase Molecular Function: acid phosphatase activity (GO:0003993); PF03767.13 "HAD superfamily, subfamily IIIB (Acid phosphatase)" TRINITY_DN15400_c0_g1_i2 173.3865615 283.8290925 62.94403039 0.221767367 -2.172881009 9.66E-25 4.14E-23 Down 31.82705 29.84307 32.81999 7.861159 4.82278 4.205825 PIN12198.1 hypothetical protein CDL12_15196 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15404_c0_g1_i1 1149.981904 1622.477682 677.4861271 0.417562679 -1.259935323 2.11E-42 1.82E-40 Down 169.3167 174.3761 162.9568 63.44064 49.21192 58.01476 XP_020267271.1 hydrophobic protein LTI6B [Asparagus officinalis] Q0DKW8|LTI6B_ORYSJ Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica OX=39947 GN=LTI6B PE=2 SV=1 -- -- -- -- -- -- KOG1773 Stress responsive protein [R] POORLY CHARACTERIZED General function prediction only S COG0401 hydrophobic protein Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN15407_c0_g1_i2 16.77816525 33.5563305 0 0 #NAME? 0.002133041 0.010174981 Down 2.538361 3.9494 0.04669372 0 0 1.14E-58 KRH08348.1 hypothetical protein GLYMA_16G143600 [Glycine max] P14226|PSBO_PEA "Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum OX=3888 GN=PSBO PE=1 SV=1" gmx:100792252 K02716 psbO photosystem II oxygen-evolving enhancer protein 1 ko00195 Photosynthesis -- -- -- -- -- G ENOG410XP4G photosystem II manganese-stabilizing Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: photosystem II oxygen evolving complex (GO:0009654);|Biological Process: photosystem II assembly (GO:0010207);|Molecular Function: oxygen evolving activity (GO:0010242);|Biological Process: photosystem II stabilization (GO:0042549); PF01716.17 Manganese-stabilising protein / photosystem II polypeptide TRINITY_DN15407_c0_g2_i1 6.709384895 13.41876979 0 0 #NAME? 0.007795153 0.030944064 Down 1.63082 1.292602 0 0 0 0 KRH08348.1 hypothetical protein GLYMA_16G143600 [Glycine max] P14226|PSBO_PEA "Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum OX=3888 GN=PSBO PE=1 SV=1" gmx:100792252 K02716 psbO photosystem II oxygen-evolving enhancer protein 1 ko00195 Photosynthesis -- -- -- -- -- G ENOG410XP4G photosystem II manganese-stabilizing Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: photosystem II oxygen evolving complex (GO:0009654);|Biological Process: photosystem II assembly (GO:0010207);|Molecular Function: oxygen evolving activity (GO:0010242);|Biological Process: photosystem II stabilization (GO:0042549); PF01716.17 Manganese-stabilising protein / photosystem II polypeptide TRINITY_DN15408_c0_g1_i1 1557.659399 532.4171865 2582.901611 4.85127392 2.278363641 1.10E-150 5.00E-148 Up 49.59303 43.39662 49.82715 179.9092 189.9382 189.4537 XP_012832084.1 PREDICTED: uncharacterized protein LOC105953016 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YH1N PAR1 protein -- PF06521.10 PAR1 protein TRINITY_DN15411_c0_g1_i2 53.48873316 32.3415313 74.63593502 2.307742769 1.206482424 0.000465708 0.002651435 Up 2.860899 1.614027 1.6028 3.619134 4.007311 3.778697 XP_011082292.1 calcineurin B-like protein 7 [Sesamum indicum] O81223|CNBL4_ARATH Calcineurin B-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=CBL4 PE=1 SV=3 -- -- -- -- -- -- KOG0034 "Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein" [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms DTZ COG5126 Calcium-binding protein Molecular Function: calcium-dependent protein serine/threonine phosphatase activity (GO:0004723);|Molecular Function: calcium ion binding (GO:0005509);|Biological Process: detection of calcium ion (GO:0005513);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: calcineurin complex (GO:0005955);|Biological Process: cellular potassium ion homeostasis (GO:0030007);|Biological Process: hypotonic salinity response (GO:0042539); "PF00036.31,PF13202.5,PF13405.5,PF13499.5,PF13833.5" EF hand|EF hand|EF-hand domain|EF-hand domain pair|EF-hand domain pair TRINITY_DN15415_c0_g1_i1 109.6278475 31.57325278 187.6824422 5.944349272 2.571518887 1.36E-22 5.19E-21 Up 5.82186 6.651908 3.806643 24.28523 26.73787 27.0506 EYU19925.1 hypothetical protein MIMGU_mgv1a023000mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15423_c0_g1_i2 245.7164983 87.84562341 403.5873731 4.5942798 2.199838722 2.26E-35 1.53E-33 Up 5.777766 5.148009 4.723587 18.42851 17.95535 21.675 XP_011087236.1 polygalacturonase inhibitor-like [Sesamum indicum] Q9M5J9|PGIP1_ARATH Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=PGIP1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YB0Y polygalacturonase inhibiting protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Molecular Function: polygalacturonase inhibitor activity (GO:0090353); "PF13855.5,PF12799.6,PF00560.32,PF08263.11,PF13516.5" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine rich repeat N-terminal domain|Leucine Rich repeat TRINITY_DN15425_c0_g1_i2 1483.786527 385.5438422 2582.029211 6.697109196 2.743538491 7.47E-202 5.47E-199 Up 23.34844 23.38456 21.51581 119.6854 123.0328 126.1205 PIN18558.1 putative haloacid dehalogenase-like hydrolase [Handroanthus impetiginosus] Q9FZ62|PPSP2_ARATH Inorganic pyrophosphatase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g17710 PE=2 SV=1 sind:105157728 K13248 PHOSPHO2 pyridoxal phosphate phosphatase PHOSPHO2 ko00750 Vitamin B6 metabolism KOG3120 Predicted haloacid dehalogenase-like hydrolase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111NAQ Phosphatase Molecular Function: inorganic diphosphatase activity (GO:0004427);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: protein tetramerization (GO:0051262);|Molecular Function: phosphocholine phosphatase activity (GO:0052731);|Molecular Function: phosphoethanolamine phosphatase activity (GO:0052732); "PF06888.11,PF12710.6" Putative Phosphatase|haloacid dehalogenase-like hydrolase TRINITY_DN15429_c0_g1_i1 50.88705822 1.913103717 99.86101271 52.19843119 5.705934543 1.06E-28 5.67E-27 Up 0.3552007 0.3390663 0 10.46549 8.191048 8.354894 PIN25307.1 Fe2+/Zn2+ regulated transporter [Handroanthus impetiginosus] Q94DG6|ZIP1_ORYSJ Zinc transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ZIP1 PE=1 SV=1 cit:102628184 K14709 "SLC39A1_2_3, ZIP1_2_3" "solute carrier family 39 (zinc transporter), member 1/2/3" -- -- KOG1558 Fe2+/Zn2+ regulated transporter [P] METABOLISM Inorganic ion transport and metabolism P ENOG4111GP2 zinc transporter Molecular Function: zinc ion transmembrane transporter activity (GO:0005385);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: zinc ion transport (GO:0006829);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: zinc ion transmembrane transport (GO:0071577); PF02535.21 ZIP Zinc transporter TRINITY_DN15430_c0_g1_i1 43.29574543 60.63738738 25.95410348 0.428021467 -1.22424494 0.002416861 0.01133353 Down 7.790255 9.219976 6.399826 2.701215 2.893147 2.494943 XP_012835591.1 PREDICTED: ethylene-responsive transcription factor ERF023-like [Erythranthe guttata] Q1ECI2|ERF23_ARATH Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana OX=3702 GN=ERF023 PE=2 SV=1 vvi:100248368 K09286 EREBP EREBP-like factor -- -- -- -- -- -- -- K ENOG41118MR Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873); PF00847.19 AP2 domain TRINITY_DN15437_c0_g2_i2 8.490299776 14.39784668 2.582752871 0.179384663 -2.478871549 0.013832363 0.049971544 Down 1.259885 2.196999 1.295992 0 0.4700639 0.1625476 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00612.26 IQ calmodulin-binding motif TRINITY_DN15441_c0_g1_i1 47.8186622 29.76480368 65.87252073 2.213101133 1.14606938 0.005994827 0.024738012 Up 3.082314 2.273956 2.943255 4.053686 3.92696 7.040747 PIN08681.1 hypothetical protein CDL12_18746 [Handroanthus impetiginosus] Q9XIM0|MEE14_ARATH CCG-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MEE14 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41123WT NA Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Cellular Component: chloroplast (GO:0009507);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: pollen tube guidance (GO:0010183);|Molecular Function: mediator complex binding (GO:0036033);|Biological Process: defense response to fungus (GO:0050832); -- -- TRINITY_DN15444_c0_g1_i5 1052.978502 257.8786556 1848.078349 7.166464961 2.841261649 1.30E-131 4.78E-129 Up 17.18308 16.75397 14.5335 96.98989 96.0731 87.06014 XP_011094269.1 secoisolariciresinol dehydrogenase-like [Sesamum indicum] Q94KL7|SILD_FORIN Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia OX=55183 PE=1 SV=1 -- -- -- -- -- -- KOG0725 Reductases with broad range of substrate specificities [R] POORLY CHARACTERIZED General function prediction only S COG1028 Dehydrogenase reductase Biological Process: lignan biosynthetic process (GO:0009807);|Molecular Function: (-)-secoisolariciresinol dehydrogenase activity (GO:0102911); "PF13561.5,PF00106.24,PF08659.9" Enoyl-(Acyl carrier protein) reductase|short chain dehydrogenase|KR domain TRINITY_DN15446_c0_g1_i1 20.4121517 1.960990871 38.86331252 19.81820165 4.30875415 1.81E-09 2.50E-08 Up 0.2081896 4.56E-06 0.2054277 2.324147 2.158578 1.606358 PIN04063.1 hypothetical protein CDL12_23410 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG3496 plasmid partition ParA protein -- PF07103.10 Protein of unknown function (DUF1365) TRINITY_DN15446_c0_g2_i1 17.91742169 34.73231582 1.102527553 0.031743566 -4.977391992 4.33E-09 5.72E-08 Down 1.698393 2.935581 2.611979 0.1790944 4.74E-20 0.001213565 PIN04063.1 hypothetical protein CDL12_23410 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG3496 plasmid partition ParA protein -- PF07103.10 Protein of unknown function (DUF1365) TRINITY_DN15451_c0_g1_i2 782.5215055 396.776514 1168.266497 2.944394277 1.557970872 1.86E-48 1.93E-46 Up 27.99191 33.52849 31.94504 73.4392 72.21305 76.40087 EYU42768.1 hypothetical protein MIMGU_mgv1a024146mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15453_c0_g1_i1 17.98871607 35.25296166 0.724470471 0.020550627 -5.604673768 4.23E-05 0.000303719 Down 1.651452 6.033989 3.572747 0.04558928 0.1699621 2.09E-50 XP_017970395.1 PREDICTED: uncharacterized protein LOC108660654 [Theobroma cacao] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN15457_c0_g2_i1 27.52999405 16.81147108 38.24851703 2.275143968 1.18595784 0.020797964 0.069900931 Up 0.4097626 1.984944 1.860802 2.609656 2.596466 2.491369 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15458_c0_g1_i1 2167.558346 1367.428573 2967.688119 2.170269203 1.117874008 5.69E-49 6.01E-47 Up 133.0667 154.0685 148.9466 254.1255 259.4878 249.956 CDO98037.1 unnamed protein product [Coffea canephora] Q8LEM8|RL373_ARATH 60S ribosomal protein L37-3 OS=Arabidopsis thaliana OX=3702 GN=RPL37C PE=3 SV=1 sind:105163950 K02922 "RP-L37e, RPL37" large subunit ribosomal protein L37e ko03010 Ribosome KOG3475 60S ribosomal protein L37 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2126 Binds to the 23S rRNA (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN15459_c0_g1_i1 35.01373567 68.50259712 1.524874224 0.022260094 -5.48939653 6.68E-18 1.92E-16 Down 6.180543 8.010113 4.993632 0.1052998 0 0.2222077 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15460_c0_g1_i2 1346.355159 2256.026655 436.6836635 0.193563167 -2.369123648 1.92E-145 8.21E-143 Down 31.63455 33.05071 34.65782 5.356245 5.335225 4.821598 CAN65591.1 hypothetical protein VITISV_042091 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF07727.13,PF14223.5,PF00665.25,PF13976.5" Reverse transcriptase (RNA-dependent DNA polymerase)|gag-polypeptide of LTR copia-type|Integrase core domain|GAG-pre-integrase domain TRINITY_DN15466_c0_g2_i1 22.35894821 13.06063228 31.65726414 2.423869186 1.27731184 0.027189652 0.087064042 Up 0.9885767 0.4790784 1.502414 1.75774 1.806446 2.204018 XP_011091714.2 "probable membrane-associated kinase regulator 4, partial [Sesamum indicum]" O80624|MAKR4_ARATH Probable membrane-associated kinase regulator 4 OS=Arabidopsis thaliana OX=3702 GN=MAKR4 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YINI membrane-associated kinase regulator Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506); -- -- TRINITY_DN15479_c0_g1_i1 48.57380629 26.97836395 70.16924864 2.600945289 1.379036053 0.000243458 0.001482994 Up 2.399302 3.690453 3.495721 8.210459 5.797313 6.19742 EYU24823.1 hypothetical protein MIMGU_mgv1a015137mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZAIA NA -- -- -- TRINITY_DN15480_c0_g1_i1 2733.391594 1819.842399 3646.94079 2.003987155 1.002873261 1.21E-38 9.29E-37 Up 204.438 200.1757 200.5472 340.2911 331.9102 305.8461 XP_017430435.1 PREDICTED: 60S ribosomal protein L38-like [Vigna angularis] O22860|RL38_ARATH 60S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1 pvu:PHAVU_002G233500g K02923 "RP-L38e, RPL38" large subunit ribosomal protein L38e ko03010 Ribosome KOG3499 60S ribosomal protein L38 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J ENOG4112229 Ribosomal protein L38 Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626); -- -- TRINITY_DN15494_c0_g1_i1 363.4907469 203.5711116 523.4103821 2.571142722 1.362409695 2.24E-21 8.08E-20 Up 19.50914 17.19949 17.35701 34.49998 35.78383 42.00181 PIN05237.1 hypothetical protein CDL12_22223 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41115BP NA -- PF15699.4 NPR1 interacting TRINITY_DN15495_c0_g1_i2 117.7584198 32.99499663 202.521843 6.137956165 2.617758343 5.54E-24 2.29E-22 Up 4.171383 3.352442 4.489844 18.15582 18.93809 22.19744 XP_012830448.1 PREDICTED: uncharacterized protein LOC105951540 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111DN9 "Protein of unknown function, DUF538" -- PF04398.11 "Protein of unknown function, DUF538" TRINITY_DN15501_c0_g1_i1 168.4928907 276.3246654 60.66111607 0.219528416 -2.1875204 2.06E-24 8.71E-23 Down 5.5985 5.771487 5.579248 0.932802 0.9544931 1.105247 XP_011094546.1 protein ROS1-like [Sesamum indicum] Q9SJQ6|ROS1_ARATH Protein ROS1 OS=Arabidopsis thaliana OX=3702 GN=ROS1 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- L COG0177 endonuclease III "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-(apurinic or apyrimidinic site) endonuclease activity (GO:0003906);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Biological Process: DNA repair (GO:0006281);|Biological Process: base-excision repair (GO:0006284);|Biological Process: DNA methylation (GO:0006306);|Biological Process: chromatin silencing (GO:0006342);|Molecular Function: DNA N-glycosylase activity (GO:0019104);|Biological Process: negative regulation of chromatin silencing (GO:0031936);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: defense response to fungus (GO:0050832);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);|Biological Process: DNA demethylation (GO:0080111);" "PF15628.5,PF15629.5" RRM in Demeter|Permuted single zf-CXXC unit TRINITY_DN15506_c0_g1_i1 50.52580817 94.74948203 6.302134304 0.066513654 -3.910205652 3.07E-18 8.97E-17 Down 7.057499 7.518013 4.996993 0.2732068 0.4270259 0.3099801 KZV25427.1 hypothetical protein F511_19807 [Dorcoceras hygrometricum] Q39529|LEC2_CLAKE Agglutinin-2 OS=Cladrastis kentukea OX=38412 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: mannose binding (GO:0005537);|Molecular Function: metal ion binding (GO:0046872); PF00139.18 Legume lectin domain TRINITY_DN15510_c0_g1_i1 83.42709775 41.68833513 125.1658604 3.002419261 1.586125451 4.18E-08 4.86E-07 Up 2.225598 1.399711 2.203119 4.647815 4.782163 4.662267 XP_011083136.1 non-structural maintenance of chromosomes element 4 homolog A-like [Sesamum indicum] Q9C689|NSE4A_ARATH Non-structural maintenance of chromosomes element 4 homolog A OS=Arabidopsis thaliana OX=3702 GN=NSE4A PE=2 SV=1 -- -- -- -- -- -- KOG2866 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S COG5125 non-SMC element 4 homolog A (S. cerevisiae) Cellular Component: nucleus (GO:0005634);|Biological Process: DNA repair (GO:0006281);|Biological Process: DNA recombination (GO:0006310);|Cellular Component: Smc5-Smc6 complex (GO:0030915);|Biological Process: positive regulation of response to DNA damage stimulus (GO:2001022); PF08743.9 Nse4 C-terminal TRINITY_DN15511_c0_g1_i2 116.6089443 169.7478291 63.47005945 0.37390793 -1.419245025 5.93E-09 7.69E-08 Down 13.01254 15.12653 15.38873 4.024235 4.821711 4.323073 XP_019168370.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Ipomoea nil] -- -- -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein -- -- -- TRINITY_DN15513_c0_g1_i1 51.86597398 103.731948 0 0 #NAME? 4.51E-33 2.83E-31 Down 3.877074 4.445625 5.012113 0 0 0 XP_011083978.1 vinorine synthase-like [Sesamum indicum] Q70PR7|VINSY_RAUSE Vinorine synthase OS=Rauvolfia serpentina OX=4060 GN=ACT PE=1 SV=2 sind:105166350 K13065 "E2.3.1.133, HCT" shikimate O-hydroxycinnamoyltransferase ko00940|ko00945|ko00941 "Phenylpropanoid biosynthesis|Stilbenoid, diarylheptanoid and gingerol biosynthesis|Flavonoid biosynthesis" -- -- -- -- -- -- -- -- Biological Process: alkaloid metabolic process (GO:0009820);|Molecular Function: vinorine synthase activity (GO:0050636); PF02458.14 Transferase family TRINITY_DN15534_c0_g1_i2 96.59591066 165.5536051 27.63821622 0.166944212 -2.582562015 2.86E-19 8.97E-18 Down 12.09564 14.84381 12.43704 1.030463 1.851023 2.385179 XP_011093383.2 protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 [Sesamum indicum] Q8GXC2|PHL4_ARATH Myb family transcription factor PHL4 OS=Arabidopsis thaliana OX=3702 GN=PHL4 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGDG Myb-like DNA-binding domain "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: pollen development (GO:0009555);" "PF14379.5,PF00249.30" "MYB-CC type transfactor, LHEQLE motif|Myb-like DNA-binding domain" TRINITY_DN15539_c0_g1_i1 135.3679639 76.87456277 193.8613649 2.521788196 1.334447109 2.21E-09 3.02E-08 Up 5.045194 4.770096 4.319386 10.69629 9.737511 8.335466 PIN20248.1 Lactate dehydrogenase [Handroanthus impetiginosus] P22988|LDHA_HORVU L-lactate dehydrogenase A OS=Hordeum vulgare OX=4513 PE=1 SV=1 sind:105164308 K00016 "LDH, ldh" L-lactate dehydrogenase ko00640|ko00620|ko00270|ko00010 Propanoate metabolism|Pyruvate metabolism|Cysteine and methionine metabolism|Glycolysis / Gluconeogenesis KOG1495 Lactate dehydrogenase [C] METABOLISM Energy production and conversion C COG0039 Catalyzes the reversible oxidation of malate to oxaloacetate (By similarity) Molecular Function: L-lactate dehydrogenase activity (GO:0004459);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: carboxylic acid metabolic process (GO:0019752); "PF00056.22,PF02866.17" "lactate/malate dehydrogenase, NAD binding domain|lactate/malate dehydrogenase, alpha/beta C-terminal domain" TRINITY_DN15542_c1_g1_i3 64.96337193 41.37976594 88.54697791 2.139861739 1.097517584 0.000516604 0.002908372 Up 3.921595 2.424604 2.738134 5.161229 4.825577 5.571603 PIN13629.1 hypothetical protein CDL12_13745 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15545_c0_g1_i1 44.33296942 73.77295059 14.89298826 0.201876001 -2.30845868 2.61E-08 3.12E-07 Down 9.875656 9.680736 9.580876 1.629021 1.350386 1.708028 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15553_c0_g1_i1 1576.831054 2396.18327 757.4788369 0.316118907 -1.661460769 2.44E-54 3.02E-52 Down 376.0084 348.0723 325.7773 86.84173 78.30099 102.9219 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15555_c0_g1_i1 25.46517273 15.23329693 35.69704853 2.343356707 1.228576579 0.020697609 0.069661643 Up 1.244559 0.5985901 1.49253 2.064726 2.073941 2.260436 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15566_c0_g1_i3 26.16297821 16.36615905 35.95979737 2.197204443 1.135669114 0.026305154 0.08467717 Up 0.8879187 1.502381 1.334343 2.106611 2.522526 2.003306 XP_011092027.1 uncharacterized GPI-anchored protein At3g06035 [Sesamum indicum] Q84MC0|UGPI4_ARATH Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111C3W NA Cellular Component: plasma membrane (GO:0005886);|Cellular Component: anchored component of membrane (GO:0031225); -- -- TRINITY_DN15572_c0_g1_i2 2065.138326 3182.064862 948.2117902 0.297986317 -1.746682007 5.37E-109 1.54E-106 Down 104.6902 99.62656 102.9633 24.12789 24.29893 25.4908 PIN00359.1 Catechol oxidase [Handroanthus impetiginosus] Q9MB14|PPO2_IPOBA "Polyphenol oxidase II, chloroplastic OS=Ipomoea batatas OX=4120 GN=co-2 PE=2 SV=2" sind:105176878 K00422 E1.10.3.1 polyphenol oxidase ko00950|ko00350 Isoquinoline alkaloid biosynthesis|Tyrosine metabolism -- -- -- -- -- S ENOG410XSH6 polyphenol oxidase Molecular Function: catechol oxidase activity (GO:0004097);|Cellular Component: chloroplast thylakoid lumen (GO:0009543);|Biological Process: pigment biosynthetic process (GO:0046148);|Molecular Function: metal ion binding (GO:0046872); "PF00264.19,PF12143.7,PF12142.7" Common central domain of tyrosinase|Protein of unknown function (DUF_B2219)|Polyphenol oxidase middle domain TRINITY_DN15574_c0_g1_i1 679.2135722 329.0951967 1029.331948 3.127763511 1.645131435 5.15E-48 5.30E-46 Up 27.23684 25.03905 29.67166 70.94494 67.47339 68.4197 XP_011077164.1 uncharacterized protein LOC105161235 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41119C1 NA -- -- -- TRINITY_DN15575_c0_g1_i1 48.63078882 16.96641223 80.2951654 4.732595454 2.242631605 8.78E-09 1.12E-07 Up 1.349987 0.8164713 1.286497 4.909037 3.949143 4.458812 XP_011077126.1 uncharacterized protein LOC105161205 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111A2N NA -- -- -- TRINITY_DN15576_c0_g1_i4 47.55425717 26.80881464 68.2996997 2.547658321 1.349171804 0.000408867 0.002363694 Up 1.643628 1.230026 1.934823 3.031763 3.574432 3.210724 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15579_c0_g1_i1 33.03669396 11.7736696 54.29971831 4.611962129 2.205380666 1.11E-05 8.94E-05 Up 0.7477708 1.035299 0.6667165 2.579119 4.0908 2.266336 XP_011080926.1 zinc finger protein CONSTANS-LIKE 3 [Sesamum indicum] O82117|CO3_ORYSJ Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XYVB CCT motif family protein "Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: flower development (GO:0009908);|Biological Process: regulation of flower development (GO:0009909);|Biological Process: negative regulation of short-day photoperiodism, flowering (GO:0048577);" PF06203.13 CCT motif TRINITY_DN15593_c0_g1_i4 25.06426944 41.8137983 8.314740585 0.198851597 -2.330235943 1.75E-05 0.000135713 Down 4.214723 5.229924 7.06959 0.3934527 0.5820066 1.73258 XP_020553367.1 protein LITTLE ZIPPER 3 [Sesamum indicum] Q56WL5|ZPR4_ARATH Protein LITTLE ZIPPER 4 OS=Arabidopsis thaliana OX=3702 GN=ZPR4 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZDCW zpr3 zpr3 (little zipper 3) -- -- -- TRINITY_DN15600_c0_g1_i2 65.7952772 89.25268944 42.33786496 0.474359543 -1.075947124 0.000839734 0.004475 Down 2.678916 2.978893 2.536901 0.9972416 1.095086 1.057709 XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] P0CT41|TF212_SCHPO Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF00665.25 Integrase core domain TRINITY_DN15601_c0_g2_i1 8.696169389 13.66240945 3.729929331 0.273006701 -1.872991732 0.044752939 0.129665549 Down 1.299772 2.058211 2.296321 0.8015962 0 0.4200095 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15603_c0_g1_i1 33.11917416 44.83004045 21.40830787 0.4775438 -1.066295033 0.01898742 0.064940924 Down 4.766934 9.352223 6.880689 3.062631 3.241929 1.81692 PIN25303.1 hypothetical protein CDL12_01953 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZFD3 NA -- -- -- TRINITY_DN15605_c0_g1_i2 127.3665355 184.4012785 70.33179245 0.381406208 -1.390599767 1.27E-08 1.58E-07 Down 9.964472 13.38528 13.97138 3.456498 4.770004 3.23203 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15605_c0_g3_i1 48.80730864 90.2858887 7.328728574 0.08117247 -3.622865679 2.22E-16 5.68E-15 Down 6.111333 4.635939 6.309039 0.3627477 0.5931478 0.12422 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15613_c0_g1_i2 150.786494 72.14333397 229.4296541 3.180192007 1.669113872 3.90E-12 7.16E-11 Up 6.915413 8.35548 7.667306 21.78225 15.54344 21.65317 XP_022891969.1 calmodulin-like protein 6 [Olea europaea var. sylvestris] Q93Z27|CML46_ARATH Probable calcium-binding protein CML46 OS=Arabidopsis thaliana OX=3702 GN=CML46 PE=1 SV=1 -- -- -- -- -- -- KOG0027 Calmodulin and related proteins (EF-Hand superfamily) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms DTZ COG5126 Calcium-binding protein Molecular Function: calcium ion binding (GO:0005509); "PF00036.31,PF13405.5,PF13499.5,PF13202.5" EF hand|EF-hand domain|EF-hand domain pair|EF hand TRINITY_DN15614_c0_g1_i1 32.6994937 14.66360801 50.73537939 3.459951969 1.790752011 7.32E-05 0.000499555 Up 1.123448 1.221748 0.6569402 3.238877 2.791586 2.235904 PIM98253.1 hypothetical protein CDL12_29271 [Handroanthus impetiginosus] K4BWV2|NAP1_SOLLC NAC domain-containing protein 1 OS=Solanum lycopersicum OX=4081 GN=NAP1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YB53 nac domain "Molecular Function: DNA binding (GO:0003677);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);" PF02365.14 No apical meristem (NAM) protein TRINITY_DN1561_c0_g1_i1 8.372825076 15.6431226 1.102527553 0.070480017 -3.826641909 0.000734324 0.003969654 Down 3.695622 2.883286 3.42936 0.6235631 0 0 PIN05297.1 putative membrane protein [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG2970 Predicted membrane protein [S] POORLY CHARACTERIZED Function unknown S COG5237 Post-GPI attachment to proteins -- PF04080.12 Per1-like family TRINITY_DN15621_c0_g1_i2 62.85959633 41.37932824 84.33986443 2.038212509 1.027304478 0.001595076 0.007889866 Up 1.133636 1.053712 1.14639 1.868431 1.767284 1.836009 PIN06199.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9SA25|WAKLG_ARATH Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana OX=3702 GN=WAKL8 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16,PF13947.5" Protein kinase domain|Protein tyrosine kinase|Wall-associated receptor kinase galacturonan-binding TRINITY_DN15625_c2_g1_i1 10.23772535 20.4754507 0 0 #NAME? 4.18E-07 4.24E-06 Down 2.614722 3.356069 4.984399 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15630_c0_g1_i3 24.97812743 13.8080326 36.14822226 2.617912582 1.388416923 0.008612062 0.033660007 Up 0.546895 0.838254 0.7752071 1.471074 1.39766 1.790069 PIN23170.1 Indole-3-acetate O-methyltransferase [Handroanthus impetiginosus] Q9FLN8|IAMT1_ARATH Indole-3-acetate O-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=IAMT1 PE=1 SV=1 sind:105174912 K18848 IAMT1 indole-3-acetate O-methyltransferase -- -- -- -- -- -- -- S ENOG410Y96G indole acetic acid carboxyl methyltransferase activity Molecular Function: magnesium ion binding (GO:0000287);|Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);|Biological Process: auxin homeostasis (GO:0010252);|Molecular Function: identical protein binding (GO:0042802);|Molecular Function: indole acetic acid carboxyl methyltransferase activity (GO:0051749);|Molecular Function: indole-3-acetate carboxyl methyltransferase activity (GO:0103007); PF03492.14 SAM dependent carboxyl methyltransferase TRINITY_DN15631_c0_g1_i1 41.62993403 20.94556431 62.31430374 2.975059675 1.572918607 0.000108936 0.000716393 Up 0.8484238 0.680522 0.7425986 1.740824 1.473657 2.216308 XP_011098591.2 uncharacterized protein LOC105177224 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG1520 "Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (By similarity)" -- "PF13360.5,PF01011.20,PF13570.5" PQQ-like domain|PQQ enzyme repeat|PQQ-like domain TRINITY_DN15632_c0_g2_i1 4173.752844 2762.12691 5585.378778 2.02212967 1.015875514 3.43E-13 6.88E-12 Up 599.849 551.3662 604.1922 1044.616 974.6248 843.0277 XP_022993453.1 elongation factor 1-alpha [Cucurbita maxima] P34823|EF1A2_DAUCA Elongation factor 1-alpha OS=Daucus carota OX=4039 PE=2 SV=1 csv:101220517 K03231 EEF1A elongation factor 1-alpha ko03013 RNA transport KOG0052 Translation elongation factor EF-1 alpha/Tu [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG5256 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity) Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737); PF03144.24 Elongation factor Tu domain 2 TRINITY_DN15633_c0_g2_i1 34.58381287 47.55507113 21.6125546 0.454474236 -1.137729585 0.010449912 0.039460348 Down 3.590182 4.927359 3.665736 1.842866 0.9812878 1.618254 PIN01354.1 hypothetical protein CDL12_26136 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111USD Late embryogenesis abundant protein -- -- -- TRINITY_DN15633_c0_g4_i2 148.0689422 93.88446626 202.2534182 2.154279896 1.107205705 4.24E-07 4.30E-06 Up 6.083366 8.149886 9.438143 12.68575 15.17925 13.26441 EYU36060.1 hypothetical protein MIMGU_mgv1a014606mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111USD Late embryogenesis abundant protein -- PF03168.12 Late embryogenesis abundant protein TRINITY_DN1563_c0_g1_i1 23.80267884 47.60535767 0 0 #NAME? 2.42E-15 5.75E-14 Down 8.192159 8.565432 4.559926 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15653_c0_g1_i1 236.9899994 119.1908434 354.7891554 2.976647745 1.573688504 4.37E-19 1.35E-17 Up 10.07062 12.25727 11.85044 23.58228 27.37536 31.15602 PIM98488.1 hypothetical protein CDL12_29033 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YRN3 NA -- PF14009.5 Domain of unknown function (DUF4228) TRINITY_DN15655_c0_g1_i2 65.69213199 129.901222 1.483041951 0.01141669 -6.452711785 6.73E-36 4.65E-34 Down 3.686482 3.965295 3.675313 0.04350196 0.02142541 0.02281085 XP_008374950.2 PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Malus domestica] F4IFD0|MAIL2_ARATH Protein MAIN-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=At2g04865 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YC97 Serine threonine-protein phosphatase 7 long form Cellular Component: nucleus (GO:0005634);|Molecular Function: transaminase activity (GO:0008483); PF10536.8 Plant mobile domain TRINITY_DN15656_c0_g1_i3 377.1374022 554.7399538 199.5348506 0.359690787 -1.475170888 6.68E-25 2.90E-23 Down 19.27788 23.15198 21.00789 6.901504 5.474174 6.036559 PIN04918.1 Iron/ascorbate family oxidoreductase [Handroanthus impetiginosus] Q9ZSA7|DLO2_ARATH Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana OX=3702 GN=DLO2 PE=2 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: defense response to oomycetes (GO:0002229);|Biological Process: salicylic acid catabolic process (GO:0046244);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213); "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN15660_c0_g1_i3 51.03491348 20.72769014 81.34213683 3.92432231 1.972443537 1.78E-07 1.89E-06 Up 0.6245478 0.5985801 0.8499017 2.045998 2.342387 2.233344 XP_011076465.1 probable inactive receptor kinase At4g23740 isoform X2 [Sesamum indicum] Q9SUQ3|Y4374_ARATH Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana OX=3702 GN=At4g23740 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDXU Leucine rich repeat N-terminal domain -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN15667_c0_g1_i1 18.5249394 29.69759712 7.352281686 0.247571602 -2.014082259 0.002528332 0.011779591 Down 3.368437 6.050155 2.857464 0.8023324 1.218529 0.41461 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15667_c0_g2_i1 44.30419069 59.68292005 28.92546133 0.484652247 -1.044978154 0.024585365 0.080120862 Down 2.308409 4.482539 2.452855 1.326584 1.21362 1.062762 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15675_c0_g1_i1 162.2611761 297.9993093 26.52304277 0.089003706 -3.489990788 2.07E-47 2.09E-45 Down 23.69313 26.98755 28.11318 1.764293 1.453261 2.428024 PIN26921.1 hypothetical protein CDL12_00325 [Handroanthus impetiginosus] Q9SS03|DIR21_ARATH Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGJA Disease resistance response protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618); PF03018.13 Dirigent-like protein TRINITY_DN15677_c0_g1_i4 119.2772789 65.68478738 172.8697705 2.631808329 1.396054423 1.17E-08 1.47E-07 Up 2.666583 2.99369 4.113131 7.168231 7.130907 6.387434 XP_011070832.1 myb family transcription factor EFM [Sesamum indicum] Q9FPE8|HHO3_ARATH Transcription factor HHO3 OS=Arabidopsis thaliana OX=3702 GN=HHO3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG4111TKR Myb family transcription factor "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);" PF00249.30 Myb-like DNA-binding domain TRINITY_DN15681_c0_g1_i3 605.5511789 872.1530852 338.9492726 0.388635067 -1.363512013 7.79E-31 4.52E-29 Down 74.97792 73.55557 68.63993 23.95841 25.94977 18.08667 EYU39332.1 hypothetical protein MIMGU_mgv1a019221mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YVNY Calcium-Binding Protein -- -- -- TRINITY_DN15685_c0_g2_i1 321.0065496 430.7580483 211.2550509 0.490426242 -1.027891917 1.39E-09 1.94E-08 Down 41.67229 35.0328 45.79552 18.06191 15.07461 15.2832 KZV22115.1 protein RALF-like 34 [Dorcoceras hygrometricum] Q9FHA6|RLF34_ARATH Protein RALF-like 34 OS=Arabidopsis thaliana OX=3702 GN=RALFL34 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YQ19 Rapid ALkalinization Factor (RALF) Molecular Function: hormone activity (GO:0005179);|Cellular Component: intracellular (GO:0005622);|Biological Process: cell-cell signaling (GO:0007267);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: calcium-mediated signaling (GO:0019722);|Cellular Component: apoplast (GO:0048046); PF05498.10 Rapid ALkalinization Factor (RALF) TRINITY_DN15690_c0_g1_i2 96.20857573 49.79378641 142.6233651 2.864280372 1.518172719 2.37E-07 2.49E-06 Up 2.044028 2.702721 1.958847 4.665527 4.303765 6.554449 XP_020261704.1 putative nuclease HARBI1 [Asparagus officinalis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z1UH transposon protein -- PF04827.13 Plant transposon protein TRINITY_DN15695_c0_g1_i1 19.68170462 39.36340924 0 0 #NAME? 4.11E-11 6.85E-10 Down 2.387753 3.013166 4.824799 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15695_c0_g2_i1 9.928937309 19.85787462 0 0 #NAME? 1.51E-06 1.40E-05 Down 2.604796 5.438466 2.47713 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15697_c0_g3_i3 16.90404184 6.597128761 27.21095492 4.124666336 2.044277418 0.002074738 0.009940739 Up 0.1112862 1.058666 0.5839733 1.95718 1.586979 2.194036 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15716_c0_g1_i2 155.9398041 293.5433519 18.33625632 0.062465241 -4.000802561 6.65E-54 8.14E-52 Down 40.48091 35.21054 38.26662 1.520249 1.534785 2.718086 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15728_c0_g1_i1 210.584208 303.5838017 117.5846142 0.387321766 -1.368395517 3.59E-09 4.80E-08 Down 54.78382 69.76616 57.80316 15.80203 14.15503 27.06399 KZV25329.1 hypothetical protein F511_34118 [Dorcoceras hygrometricum] P08770|TRA1_MAIZE Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG410ZT99 Pfam:hATC Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: transposition (GO:0032196);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN15729_c0_g2_i1 8.791838712 0 17.58367742 Inf Inf 0.005330267 0.022382685 Up 0 0 0 4.9473 0 2.959318 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15730_c0_g2_i1 8.95154207 17.90308414 0 0 #NAME? 0.000117416 0.000766449 Down 3.153582 6.054739 1.637702 4.80E-90 1.04E-91 1.50E-85 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15730_c0_g3_i1 162.5093461 85.67143478 239.3472574 2.793781359 1.48221912 8.30E-13 1.61E-11 Up 5.317077 3.493919 4.271659 10.54507 9.028175 9.887239 XP_011082053.1 UDP-glycosyltransferase 74G1-like [Sesamum indicum] Q6VAA6|U74G1_STERE UDP-glycosyltransferase 74G1 OS=Stevia rebaudiana OX=55670 GN=UGT74G1 PE=1 SV=1 sind:105164920 K13691 SGT1 pathogen-inducible salicylic acid glucosyltransferase -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glucosyltransferase activity (GO:0035251); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN15732_c0_g1_i1 774.0059796 466.1160675 1081.895892 2.321086886 1.214800529 2.73E-30 1.55E-28 Up 32.49709 30.81091 36.99376 65.77679 61.91468 60.31511 XP_022859405.1 "protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Olea europaea var. sylvestris]" Q93WF6|SAG21_ARATH "Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAG21 PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZEWF late embryogenesis abundant protein "Biological Process: response to reactive oxygen species (GO:0000302);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: defense response (GO:0006952);|Biological Process: response to oxidative stress (GO:0006979);|Biological Process: response to cold (GO:0009409);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to light stimulus (GO:0009416);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to fungus (GO:0009620);|Biological Process: response to insect (GO:0009625);|Biological Process: response to absence of light (GO:0009646);|Biological Process: response to ethylene (GO:0009723);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: leaf senescence (GO:0010150);|Biological Process: response to hydrogen peroxide (GO:0042542);|Biological Process: cellular response to water deprivation (GO:0042631);|Biological Process: root development (GO:0048364);|Biological Process: regulation of leaf senescence (GO:1900055);|Biological Process: regulation of defense response to fungus (GO:1900150);|Biological Process: regulation of defense response to bacterium (GO:1900424);|Biological Process: response to salt (GO:1902074);|Biological Process: regulation of photoperiodism, flowering (GO:2000028);" -- -- TRINITY_DN15733_c0_g1_i1 22.37531217 13.54735056 31.20327377 2.303274993 1.203686668 0.023092959 0.07611521 Up 1.358784 1.312363 0.6654283 1.550394 2.353846 2.097461 XP_011098833.1 lysine histidine transporter 1 [Sesamum indicum] Q9LRB5|LHT2_ARATH Lysine histidine transporter 2 OS=Arabidopsis thaliana OX=3702 GN=LHT2 PE=1 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Molecular Function: symporter activity (GO:0015293);|Cellular Component: integral component of membrane (GO:0016021); PF01490.17 Transmembrane amino acid transporter protein TRINITY_DN15741_c0_g1_i1 113.4278304 54.00573616 172.8499247 3.200584549 1.67833542 3.56E-11 5.99E-10 Up 2.717378 4.792737 5.341319 10.66925 10.93291 11.52073 PIN02796.1 hypothetical protein CDL12_24686 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15743_c0_g1_i6 202.1569107 287.9641148 116.3497066 0.404042381 -1.307421466 1.73E-12 3.29E-11 Down 11.92964 13.27568 14.94669 3.550531 4.183581 5.364048 PIN05746.1 "Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Handroanthus impetiginosus]" Q9M439|BCAT2_ARATH "Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCAT2 PE=1 SV=1" sind:105162194 K00826 "E2.6.1.42, ilvE" branched-chain amino acid aminotransferase ko00290|ko00770|ko00280|ko00270 "Valine, leucine and isoleucine biosynthesis|Pantothenate and CoA biosynthesis|Valine, leucine and isoleucine degradation|Cysteine and methionine metabolism" KOG0975 "Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily" [E] METABOLISM Amino acid transport and metabolism E COG0115 brancheD-chain amino acid aminotransferase Molecular Function: branched-chain-amino-acid transaminase activity (GO:0004084);|Biological Process: isoleucine biosynthetic process (GO:0009097);|Biological Process: leucine biosynthetic process (GO:0009098);|Biological Process: valine biosynthetic process (GO:0009099);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: L-leucine transaminase activity (GO:0052654);|Molecular Function: L-valine transaminase activity (GO:0052655);|Molecular Function: L-isoleucine transaminase activity (GO:0052656);|Biological Process: plant-type cell wall organization or biogenesis (GO:0071669); PF01063.18 Amino-transferase class IV TRINITY_DN15747_c0_g1_i3 31.53490536 48.471215 14.59859573 0.301180726 -1.731298647 0.000211793 0.001309975 Down 3.996505 4.602167 5.630331 0.8002322 0.9847681 1.640464 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15751_c0_g1_i2 57.9543315 91.00752353 24.90113947 0.273616274 -1.869774056 1.68E-07 1.80E-06 Down 11.29108 8.743419 7.46991 1.515277 2.402506 2.240952 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15757_c0_g2_i1 39.38589527 68.10701156 10.66477898 0.156588562 -2.674949263 3.35E-09 4.49E-08 Down 2.396425 2.456978 2.815806 0.2617483 0.5224337 0.1686259 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15761_c0_g1_i3 13.91666433 24.08266286 3.750665809 0.155741324 -2.682776295 0.000469456 0.002670765 Down 2.163976 2.150973 2.581637 0.1617028 0.243684 0.4991155 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15767_c0_g1_i2 32.75293813 5.728469168 59.77740708 10.43514512 3.383378759 5.37E-11 8.82E-10 Up 0.3313316 0.2587445 0.3990677 3.172577 2.559463 2.612079 PIN10640.1 Ubiquitin--protein ligase [Handroanthus impetiginosus] Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana OX=3702 GN=PUB24 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YC1Z e3 ubiquitin-protein ligase Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Biological Process: defense response (GO:0006952); PF04564.14 U-box domain TRINITY_DN15768_c0_g1_i1 13.82951512 27.65903024 0 0 #NAME? 4.27E-08 4.96E-07 Down 4.38002 3.850962 1.666374 2.57E-27 0 5.43E-23 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15768_c0_g2_i4 13.22781691 24.93075959 1.524874224 0.061164371 -4.031164684 0.014133203 0.050827455 Down 0.625543 2.821532 5.468077 0.1495208 0 0.3246894 PIN07907.1 hypothetical protein CDL12_19518 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15774_c0_g1_i1 64.71982002 113.7409741 15.69866596 0.138021202 -2.857038192 1.61E-15 3.87E-14 Down 12.60856 11.43749 10.54218 1.40527 0.7930233 1.643184 AJO53277.1 chalcone synthase-like protein [Pogostemon cablin] P23419|CHS2_SOLLC Chalcone synthase 2 OS=Solanum lycopersicum OX=4081 GN=CHS2 PE=2 SV=2 nnu:104602160 K00660 CHS chalcone synthase ko04712|ko00941 Circadian rhythm - plant|Flavonoid biosynthesis -- -- -- -- -- Q COG3424 synthase Biological Process: flavonoid biosynthetic process (GO:0009813);|Molecular Function: naringenin-chalcone synthase activity (GO:0016210); PF00195.18 "Chalcone and stilbene synthases, N-terminal domain" TRINITY_DN15776_c0_g2_i1 12.55968374 6.273076002 18.84629148 3.004314226 1.587035715 0.036927667 0.111342252 Up 0.5448085 0.7930489 0.8538893 1.808885 2.307977 1.324969 XP_012855327.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g13630 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN15785_c0_g1_i2 93.36325086 31.64622203 155.0802797 4.900435811 2.292910058 5.51E-16 1.38E-14 Up 3.841443 2.690458 3.769415 11.33521 16.02403 13.26857 XP_011091753.1 BON1-associated protein 2-like [Sesamum indicum] Q58FX0|BAP2_ARATH BON1-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=BAP2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZCTQ bon association protein Biological Process: defense response (GO:0006952);|Cellular Component: membrane (GO:0016020); -- -- TRINITY_DN15787_c0_g1_i2 69.5551576 122.5003632 16.60995199 0.135591043 -2.882666218 1.29E-16 3.37E-15 Down 13.18589 11.20499 10.82185 1.162118 1.71974 0.9410601 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15790_c0_g1_i2 183.4555892 40.98722834 325.92395 7.951841663 2.99128903 1.12E-43 1.01E-41 Up 2.163252 3.345771 3.609836 19.76482 19.96397 18.78515 XP_011092102.1 F-box protein PP2-B15 [Sesamum indicum] O80494|P2B15_ARATH F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111A6C FBOX Molecular Function: carbohydrate binding (GO:0030246); PF14299.5 Phloem protein 2 TRINITY_DN15793_c0_g1_i1 15.46069441 23.60566546 7.315723361 0.30991388 -1.690060727 0.014643253 0.052359291 Down 2.82378 1.620265 2.672366 0.809807 0.9086166 0.1191073 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15794_c0_g1_i2 38.71102488 54.9973362 22.42471356 0.407741813 -1.294272186 0.041952026 0.123265473 Down 3.450772 6.886306 3.333132 2.285676 1.6528 0.5861738 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15801_c0_g1_i6 348.8014246 206.5218642 491.080985 2.377864382 1.249666435 2.41E-17 6.60E-16 Up 9.194364 9.651225 11.21887 18.30681 19.2834 20.18933 PIN25182.1 hypothetical protein CDL12_02080 [Handroanthus impetiginosus] O80763|NRX1_ARATH Probable nucleoredoxin 1 OS=Arabidopsis thaliana OX=3702 GN=At1g60420 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YY12 Domain-Containing protein Cellular Component: cytosol (GO:0005829);|Biological Process: pollen tube growth (GO:0009860);|Biological Process: pollen tube guidance (GO:0010183);|Biological Process: cell redox homeostasis (GO:0045454);|Biological Process: response to cadmium ion (GO:0046686);|Molecular Function: protein-disulfide reductase activity (GO:0047134);|Biological Process: regulation of pollen tube growth (GO:0080092); "PF03107.15,PF00130.21,PF00628.28" C1 domain|Phorbol esters/diacylglycerol binding domain (C1 domain)|PHD-finger TRINITY_DN15805_c0_g1_i2 1230.237976 658.7434955 1801.732457 2.73510474 1.451596081 7.90E-58 1.06E-55 Up 46.59881 50.14305 50.69592 106.019 107.9292 111.5064 PIN06221.1 Prenylated rab acceptor 1 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111C7K PRA1 family protein -- PF03208.18 PRA1 family protein TRINITY_DN15811_c0_g1_i1 276.0326505 172.9022853 379.1630158 2.192932355 1.13286131 5.14E-12 9.34E-11 Up 10.14817 9.833378 13.06186 18.57703 19.53206 20.35609 PIN12980.1 Protein kinase C [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YXZ3 DC1 domain-containing protein -- "PF03107.15,PF00130.21" C1 domain|Phorbol esters/diacylglycerol binding domain (C1 domain) TRINITY_DN15816_c0_g1_i3 178.4080269 114.5567021 242.2593518 2.114754942 1.080490494 3.47E-08 4.09E-07 Up 8.516799 7.097898 7.958477 14.23495 13.55339 12.32921 XP_011098375.1 uncharacterized protein LOC105177049 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15819_c0_g1_i4 164.775734 105.9877056 223.5637623 2.109336748 1.076789435 3.29E-05 0.000241423 Up 4.975937 5.377863 5.273791 8.984804 6.734671 10.84578 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15821_c0_g1_i1 170.3921117 98.4817893 242.3024341 2.460378064 1.298880019 1.06E-10 1.68E-09 Up 11.5704 8.639775 9.668757 20.38629 18.94465 20.00698 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15831_c1_g3_i1 72.02047772 143.6551671 0.385788347 0.002685517 -8.540584605 1.73E-43 1.54E-41 Down 11.10857 13.03743 11.73382 5.40E-43 6.98E-75 0.08631004 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15832_c0_g1_i1 5.876474646 9.860565884 1.892383409 0.191914281 -2.381466026 0.04879573 0.13894891 Down 0.9672678 1.519621 1.202497 0.1643696 1.62E-71 0.3524273 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15833_c0_g1_i1 52.98173821 83.18864214 22.77483428 0.273773362 -1.868946012 4.79E-07 4.82E-06 Down 8.220577 6.069527 5.892252 1.20301 1.323228 1.892185 PIN24256.1 Aspartyl protease [Handroanthus impetiginosus] Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis OX=150966 GN=nep1 PE=1 SV=1 -- -- -- -- -- -- KOG1339 Aspartyl protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XNV7 aspartic Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Cellular Component: extracellular region (GO:0005576); "PF14541.5,PF00026.22,PF14543.5" Xylanase inhibitor C-terminal|Eukaryotic aspartyl protease|Xylanase inhibitor N-terminal TRINITY_DN15838_c0_g1_i1 47.22437994 64.9023384 29.54642147 0.455244329 -1.13528705 0.00220985 0.010478214 Down 10.61263 6.390568 10.36019 2.439596 2.926697 4.602358 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15846_c0_g1_i6 152.6903446 219.0442124 86.3364768 0.394150915 -1.34317997 4.76E-10 7.03E-09 Down 27.64168 28.58857 27.21869 12.078 7.3987 7.002068 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15847_c0_g1_i3 107.8721128 145.817708 69.92651764 0.479547502 -1.060254364 1.75E-05 0.000135563 Down 13.47192 14.41618 16.93671 5.033908 5.967137 6.295733 XP_012830349.1 PREDICTED: auxin-repressed 12.5 kDa protein [Erythranthe guttata] Q05349|12KD_FRAAN Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa OX=3747 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YV4V Auxin-repressed 12.5 kDa Biological Process: auxin-activated signaling pathway (GO:0009734); -- -- TRINITY_DN15848_c0_g1_i1 150.2066797 82.75441777 217.6589416 2.630179119 1.395161052 7.78E-11 1.25E-09 Up 5.888754 6.510686 5.62025 11.19226 12.92743 14.12263 PIN03907.1 hypothetical protein CDL12_23561 [Handroanthus impetiginosus] Q9FMR3|NAC90_ARATH NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41114GP NAC domain-containing protein 90-like Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634); PF02365.14 No apical meristem (NAM) protein TRINITY_DN15851_c0_g1_i1 21.8019058 32.50332142 11.10049018 0.341518642 -1.549963766 0.007702383 0.03062937 Down 2.954375 4.151321 2.399173 1.150719 0.8696306 0.6664366 XP_011077850.1 uncharacterized protein LOC105161748 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4110M2B NA -- -- -- TRINITY_DN15855_c0_g1_i1 33.93909578 17.84127222 50.03691935 2.804560053 1.487774475 0.000802039 0.004295806 Up 0.7179693 0.7188272 0.6169694 1.697113 1.603731 1.355641 PIN20374.1 Cytochrome P450 CYP2 subfamily [Handroanthus impetiginosus] O81970|C71A9_SOYBN Cytochrome P450 71A9 OS=Glycine max OX=3847 GN=CYP71A9 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN15856_c0_g1_i1 28.49388813 41.25255197 15.73522429 0.381436385 -1.390485627 0.008130612 0.032068198 Down 2.24384 4.96331 5.077441 1.217099 0.7685151 1.785963 PIN22068.1 hypothetical protein CDL12_05228 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15857_c0_g1_i2 266.6288968 59.63886872 473.618925 7.941447166 2.989401933 2.52E-61 3.65E-59 Up 2.49943 3.102087 3.06527 18.85674 19.11956 17.83692 XP_011083288.1 epidermis-specific secreted glycoprotein EP1-like [Sesamum indicum] Q9ZVA5|EP1L4_ARATH EP1-like glycoprotein 4 OS=Arabidopsis thaliana OX=3702 GN=At1g78860 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGSV Curculin-like mannose-binding lectin family protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: plant-type cell wall (GO:0009505);|Molecular Function: carbohydrate binding (GO:0030246); PF01453.23 D-mannose binding lectin TRINITY_DN15878_c1_g2_i3 29.39883521 17.41328307 41.38438734 2.376598782 1.248898368 0.012025411 0.044399006 Up 0.6033214 0.3446373 0.8059897 0.9083783 1.078391 1.358014 XP_012829069.1 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Erythranthe guttata] Q25AG2|LERK4_ORYSI G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK4 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: carbohydrate binding (GO:0030246); "PF08276.10,PF01453.23" PAN-like domain|D-mannose binding lectin TRINITY_DN15879_c0_g3_i1 27.56253683 49.22173292 5.903340744 0.119933623 -3.059691928 4.45E-08 5.15E-07 Down 3.649047 3.388133 3.972416 0.4887581 0.3972107 0.181138 XP_011074532.1 deoxyuridine 5'-triphosphate nucleotidohydrolase [Sesamum indicum] Q9STG6|DUT_ARATH Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Arabidopsis thaliana OX=3702 GN=DUT PE=1 SV=1 sind:105159237 K01520 "dut, DUT" dUTP pyrophosphatase ko00240 Pyrimidine metabolism KOG3370 dUTPase [F] METABOLISM Nucleotide transport and metabolism F COG0756 "This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA (By similarity)" Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: dUTP diphosphatase activity (GO:0004170);|Cellular Component: cytosol (GO:0005829);|Biological Process: dUMP biosynthetic process (GO:0006226);|Biological Process: DNA repair (GO:0006281);|Molecular Function: identical protein binding (GO:0042802);|Biological Process: dUTP catabolic process (GO:0046081); PF00692.18 dUTPase TRINITY_DN15884_c0_g1_i1 36.18506412 70.13906271 2.231065533 0.031809172 -4.974413356 6.61E-07 6.52E-06 Down 3.303758 7.792293 4.0893 0.1271287 0.1257501 0.1334478 XP_018857246.1 PREDICTED: uncharacterized protein LOC109019418 [Juglans regia] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN15886_c0_g1_i1 2197.336168 972.0262649 3422.646072 3.521145668 1.816044912 4.46E-122 1.44E-119 Up 47.89367 49.45258 47.63503 132.4984 139.0842 140.4622 XP_011100401.1 zinc transporter 8-like [Sesamum indicum] Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ZIP5 PE=2 SV=1 sind:105178589 K14709 "SLC39A1_2_3, ZIP1_2_3" "solute carrier family 39 (zinc transporter), member 1/2/3" -- -- KOG1558 Fe2+/Zn2+ regulated transporter [P] METABOLISM Inorganic ion transport and metabolism P ENOG4111GP2 zinc transporter Molecular Function: zinc ion transmembrane transporter activity (GO:0005385);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: zinc ion transport (GO:0006829);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: zinc ion transmembrane transport (GO:0071577); PF02535.21 ZIP Zinc transporter TRINITY_DN15887_c0_g1_i1 63.2862459 89.34002116 37.23247065 0.416750188 -1.262745243 0.000134552 0.000868438 Down 12.08211 11.26672 9.899021 3.796788 3.22455 4.095135 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15890_c0_g1_i2 24.47396707 13.62648538 35.32144876 2.592117321 1.374131017 0.00933133 0.035987855 Up 0.389516 1.49774 0.8247703 1.439686 2.118779 2.058982 AEQ61906.1 NAC domain protein NAC2 [Salvia miltiorrhiza] K4BNG7|NAP2_SOLLC NAC domain-containing protein 2 OS=Solanum lycopersicum OX=4081 GN=NAP2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YB53 nac domain "Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);" PF02365.14 No apical meristem (NAM) protein TRINITY_DN15892_c0_g1_i1 13.53583586 20.09463049 6.977041237 0.347209233 -1.526122783 0.03774032 0.11321685 Down 1.253687 1.664099 1.689611 0.6172992 0.5422473 0.1430876 XP_011085179.1 berberine bridge enzyme-like 13 [Sesamum indicum] Q93ZA3|BBE13_ARATH Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana OX=3702 GN=At1g30760 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: cinnamyl-alcohol dehydrogenase activity (GO:0045551);|Molecular Function: coniferyl-alcohol dehydrogenase activity (GO:0050268);|Molecular Function: sinapyl alcohol dehydrogenase activity (GO:0052747);|Molecular Function: FAD binding (GO:0071949); PF08031.11 Berberine and berberine like TRINITY_DN15894_c0_g1_i2 35.94344532 71.88689064 0 0 #NAME? 4.30E-23 1.69E-21 Down 5.184996 4.819903 5.118335 0 0 0 PIN04839.1 "Anaphase-promoting complex (APC), subunit 11 [Handroanthus impetiginosus]" Q9LQX2|MPSR1_ARATH E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1 -- -- -- -- -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Biological Process: protein polyubiquitination (GO:0000209);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: misfolded protein binding (GO:0051787);|Biological Process: protein autoubiquitination (GO:0051865);|Molecular Function: ubiquitin protein ligase activity (GO:0061630);|Biological Process: regulation of protein complex stability (GO:0061635);|Biological Process: cellular response to misfolded protein (GO:0071218);|Biological Process: cytoplasm protein quality control by the ubiquitin-proteasome system (GO:0071629); "PF13639.5,PF17123.4,PF13923.5,PF12678.6,PF00097.24,PF14634.5,PF13445.5" "Ring finger domain|RING-like zinc finger|Zinc finger, C3HC4 type (RING finger)|RING-H2 zinc finger domain|Zinc finger, C3HC4 type (RING finger)|zinc-RING finger domain|RING-type zinc-finger" TRINITY_DN15896_c0_g1_i4 31.14028393 18.45192968 43.82863817 2.375287513 1.248102153 0.006668769 0.027098329 Up 1.804064 2.20266 1.617529 3.241509 3.932309 3.686335 XP_011090697.1 non-specific lipid-transfer protein-like protein At2g13820 [Sesamum indicum] Q9ZQI8|NLTL2_ARATH Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana OX=3702 GN=At2g13820 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z3HC Non-specific lipid-transfer protein-like protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: lipid transport (GO:0006869);|Molecular Function: lipid binding (GO:0008289);|Cellular Component: anchored component of plasma membrane (GO:0046658); "PF14368.5,PF00234.21" Probable lipid transfer|Protease inhibitor/seed storage/LTP family TRINITY_DN1590_c0_g1_i1 14.16794704 27.6114236 0.724470471 0.02623807 -5.252194575 1.12E-07 1.23E-06 Down 1.761266 2.189616 2.586994 0 0.1445914 0 XP_011073581.1 cyclin-dependent kinase G-2-like [Sesamum indicum] Q7XUF4|CDKG2_ORYSJ Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKG-2 PE=2 SV=2 sind:105158495 K08818 CDC2L cell division cycle 2-like -- -- KOG0600 Cdc2-related protein kinase [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " -- -- -- Molecular Function: cyclin-dependent protein serine/threonine kinase activity (GO:0004693);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: protein phosphorylation (GO:0006468);|Molecular Function: RNA polymerase II CTD heptapeptide repeat kinase activity (GO:0008353); -- -- TRINITY_DN15915_c0_g1_i1 22.15250237 5.746632644 38.55837209 6.709733244 2.746255411 2.87E-06 2.56E-05 Up 0.6255161 0.9038385 0.3500008 3.386525 3.948578 3.182708 PIN08309.1 H+/oligopeptide symporter [Handroanthus impetiginosus] Q9M817|PTR6_ARATH Protein NRT1/ PTR FAMILY 1.2 OS=Arabidopsis thaliana OX=3702 GN=NPF1.2 PE=1 SV=1 tcc:TCM_035998 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Molecular Function: peptide:proton symporter activity (GO:0015333);|Biological Process: nitrate transport (GO:0015706);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oligopeptide transmembrane transporter activity (GO:0035673);|Molecular Function: low-affinity nitrate transmembrane transporter activity (GO:0080054);|Molecular Function: peptide transmembrane transporter activity (GO:1904680); PF00854.20 POT family TRINITY_DN15916_c0_g3_i1 8.631249761 15.75590446 1.506595062 0.095620982 -3.386528963 0.048976218 0.139349222 Down 1.46879 5.252136 1.092811 0.2548645 2.04E-25 0.3795606 OTG24394.1 putative peptidase C1A [Helianthus annuus] A2XQE8|SAG39_ORYSI Senescence-specific cysteine protease SAG39 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_14861 PE=3 SV=1 -- -- -- -- -- -- KOG1543 Cysteine proteinase Cathepsin L [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG4870 cathepsin Biological Process: aging (GO:0007568);|Molecular Function: cysteine-type peptidase activity (GO:0008234);|Biological Process: response to ethylene (GO:0009723);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: response to gibberellin (GO:0009739);|Biological Process: leaf senescence (GO:0010150);|Cellular Component: senescence-associated vacuole (GO:0010282);|Biological Process: programmed cell death involved in cell development (GO:0010623); PF08246.11 Cathepsin propeptide inhibitor domain (I29) TRINITY_DN15923_c0_g1_i5 77.98730948 112.9237221 43.05089684 0.381238734 -1.391233391 1.56E-05 0.000121783 Down 15.89251 12.48024 11.4661 5.329767 5.007515 1.93358 EYU36339.1 hypothetical protein MIMGU_mgv1a001782mg [Erythranthe guttata] O49607|SBT16_ARATH Subtilisin-like protease SBT1.6 OS=Arabidopsis thaliana OX=3702 GN=SBT1.6 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Molecular Function: serine-type peptidase activity (GO:0008236);|Biological Process: plant-type cell wall modification (GO:0009827);|Cellular Component: membrane (GO:0016020); -- -- TRINITY_DN15925_c0_g1_i1 13.37186771 6.73234763 20.01138778 2.972423422 1.571639643 0.029593526 0.093183888 Up 1.982821 0.4867689 1.167876 2.183908 3.788308 2.726319 XP_015057480.1 PREDICTED: uncharacterized protein LOC107003677 [Solanum pennellii] -- -- -- -- -- -- -- -- KOG0987 DNA helicase PIF1/RRM3 [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " G COG0380 synthase -- PF14214.5 Helitron helicase-like domain at N-terminus TRINITY_DN15926_c0_g1_i1 21.71436855 43.4287371 0 0 #NAME? 3.12E-14 6.74E-13 Down 1.982058 3.414127 2.618498 0 0 0 PHT93810.1 hypothetical protein T459_01692 [Capsicum annuum] Q9M2G8|IQM6_ARATH IQ domain-containing protein IQM6 OS=Arabidopsis thaliana OX=3702 GN=IQM6 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XYNX Calmodulin-binding Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737); -- -- TRINITY_DN15926_c0_g2_i1 6.048300629 12.09660126 0 0 #NAME? 0.001345795 0.006790757 Down 2.757601 4.085018 0.5598974 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15926_c0_g3_i1 14.57074987 29.14149973 0 0 #NAME? 0.001226111 0.006258501 Down 8.064294 1.386591 3.041306 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15929_c0_g1_i2 21.80062714 32.47475367 11.12650061 0.342620016 -1.54531866 0.0072467 0.02907455 Down 2.481408 1.807681 1.938444 0.5036264 0.6555065 0.5680413 PIN00593.1 Cytochrome P450 CYP2 subfamily [Handroanthus impetiginosus] O48928|C77A3_SOYBN Cytochrome P450 77A3 OS=Glycine max OX=3847 GN=CYP77A3 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: membrane (GO:0016020);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN15930_c0_g1_i5 11646.94437 22603.79742 690.0913152 0.030529884 -5.033634078 0 0 Down 636.7859 643.6205 645.3437 15.12143 16.46366 15.85592 AHL24448.1 patchoulol synthase variant 1 [Pogostemon cablin] Q49SP3|TPSPS_POGCB Patchoulol synthase OS=Pogostemon cablin OX=28511 PE=1 SV=1 vvi:100256880 K14181 TPS1 valencene/7-epi-alpha-selinene synthase ko00909 Sesquiterpenoid and triterpenoid biosynthesis -- -- -- -- -- S ENOG410YBXH synthase Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: terpene synthase activity (GO:0010333);|Biological Process: terpenoid biosynthetic process (GO:0016114); "PF03936.15,PF01397.20" "Terpene synthase family, metal binding domain|Terpene synthase, N-terminal domain" TRINITY_DN15932_c0_g1_i3 62.13557368 105.1295727 19.14157471 0.182076025 -2.457387128 5.48E-07 5.47E-06 Down 10.73029 13.33503 7.148366 0.5240749 1.58357 2.553791 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15935_c0_g1_i2 1028.544652 2005.847913 51.24139061 0.025546 -5.290758784 0 0 Down 79.73034 75.0393 79.09976 1.71794 1.557953 1.534972 XP_011082995.1 phospholipase A1-IIdelta [Sesamum indicum] Q9SJI7|PLA20_ARATH Phospholipase A1-IIdelta OS=Arabidopsis thaliana OX=3702 GN=At2g42690 PE=1 SV=1 -- -- -- -- -- -- KOG4569 Predicted lipase [I] METABOLISM Lipid transport and metabolism S ENOG410YCH0 phosphatidylcholine 1-acylhydrolase activity Cellular Component: cytoplasm (GO:0005737);|Molecular Function: phospholipase A1 activity (GO:0008970);|Cellular Component: chloroplast (GO:0009507);|Biological Process: UV protection (GO:0009650);|Biological Process: lipid catabolic process (GO:0016042);|Biological Process: cellular response to UV-B (GO:0071493); PF01764.24 Lipase (class 3) TRINITY_DN15938_c0_g2_i1 15.64616722 30.90654609 0.385788347 0.012482415 -6.323959061 2.55E-09 3.47E-08 Down 2.61912 2.538616 2.766941 0 0 0.09117014 KYP70042.1 hypothetical protein KK1_009250 [Cajanus cajan] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZSSE Endonuclease/Exonuclease/phosphatase family -- -- -- TRINITY_DN15938_c0_g3_i1 31.2394011 58.06377736 4.415024844 0.076037506 -3.717144969 2.96E-11 5.00E-10 Down 2.030112 2.102353 2.013702 0.1117138 0.18388 0.07377091 PNX92269.1 cysteine-rich receptor-like protein kinase [Trifolium pratense] P92555|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111K5V Reverse transcriptase (RNA-dependent DNA polymerase) Cellular Component: mitochondrion (GO:0005739); PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN15940_c0_g1_i2 89.53862699 41.05947937 138.0177746 3.361410732 1.749066837 5.03E-10 7.41E-09 Up 4.146104 5.624693 5.515012 14.95113 13.63054 12.60885 XP_011091224.1 ethylene-responsive transcription factor ERF096 [Sesamum indicum] Q9LTC6|ERF95_ARATH Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 GN=ERF095 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410ZN2I Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873); PF00847.19 AP2 domain TRINITY_DN15943_c0_g1_i2 68.7340861 35.39593973 102.0722325 2.883727152 1.527934668 1.15E-06 1.09E-05 Up 3.511222 4.191353 3.262609 8.791341 7.108523 9.5563 PIN06083.1 hypothetical protein CDL12_21374 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z68U NA -- -- -- TRINITY_DN15944_c0_g1_i2 24.9635218 49.92704359 0 0 #NAME? 2.77E-16 7.04E-15 Down 8.569217 6.506224 8.387839 1.06E-53 5.22E-66 9.86E-62 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15944_c0_g2_i2 7.192941799 14.3858836 0 0 #NAME? 4.43E-05 0.000316914 Down 2.457042 2.2791 1.958873 3.03E-66 5.25E-72 7.17E-64 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15944_c0_g3_i1 13.54249012 27.08498024 0 0 #NAME? 4.03E-09 5.36E-08 Down 4.745013 5.897827 5.795333 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15947_c0_g1_i1 131.6263855 211.3681171 51.88465385 0.245470578 -2.026377981 1.57E-17 4.37E-16 Down 18.13802 21.60239 22.91143 4.160413 4.528422 3.647766 XP_012846086.1 PREDICTED: zinc-finger homeodomain protein 5 [Erythranthe guttata] Q9FRL5|ZHD5_ARATH Zinc-finger homeodomain protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZHD5 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Molecular Function: protein homodimerization activity (GO:0042803);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Molecular Function: metal ion binding (GO:0046872);" -- -- TRINITY_DN15947_c0_g2_i2 49.01196494 74.22250133 23.80142855 0.320676724 -1.640808456 1.23E-05 9.82E-05 Down 9.005187 8.428817 10.71314 2.142257 2.512368 2.621505 XP_011074552.1 zinc-finger homeodomain protein 5-like [Sesamum indicum] Q9M9S0|ZHD4_ARATH Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZHD4 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Molecular Function: protein homodimerization activity (GO:0042803);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: long-day photoperiodism, flowering (GO:0048574);" -- -- TRINITY_DN15950_c0_g1_i1 86.51966054 144.5207439 28.51857719 0.197332068 -2.341302674 4.75E-15 1.10E-13 Down 7.923027 9.060687 8.556353 1.284433 1.605656 1.193901 AGN03857.1 beta-carotene hydroxylase [Scutellaria baicalensis] O49814|BCH2_CAPAN "Beta-carotene hydroxylase 2, chloroplastic (Fragment) OS=Capsicum annuum OX=4072 GN=CA2 PE=2 SV=1" sind:105160437 K15746 crtZ beta-carotene 3-hydroxylase ko00906 Carotenoid biosynthesis -- -- -- -- -- S ENOG4111G77 Beta-carotene hydroxylase Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: carotenoid biosynthetic process (GO:0016117);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: hydrolase activity (GO:0016787);|Cellular Component: chloroplast membrane (GO:0031969); PF04116.12 Fatty acid hydroxylase superfamily TRINITY_DN15951_c0_g1_i2 34.74672751 19.10203171 50.39142332 2.638013803 1.399452114 0.000948689 0.004980781 Up 2.537535 1.952243 1.013761 4.513266 3.912858 3.288399 CAN80108.1 hypothetical protein VITISV_035396 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN15976_c1_g1_i1 58.58853906 117.1770781 0 0 #NAME? 6.66E-37 4.78E-35 Down 20.50707 17.12353 16.16539 2.75E-68 5.91E-25 1.92E-17 XP_011074095.1 G2/mitotic-specific cyclin-2 [Sesamum indicum] Q9SFW6|CCB24_ARATH Cyclin-B2-4 OS=Arabidopsis thaliana OX=3702 GN=CYCB2-4 PE=2 SV=2 -- -- -- -- -- -- KOG0653 Cyclin B and related kinase-activating proteins [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D COG5024 g2 mitotic-specific Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);|Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: cyclin-dependent protein kinase holoenzyme complex (GO:0000307);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: centrosome (GO:0005813);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: regulation of mitotic nuclear division (GO:0007088);|Biological Process: positive regulation of cell proliferation (GO:0008284);|Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);|Molecular Function: protein kinase binding (GO:0019901);|Biological Process: positive regulation of cell cycle (GO:0045787);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN15981_c0_g1_i2 16.53746868 9.463141001 23.61179635 2.495133101 1.319116777 0.04011117 0.118924615 Up 1.014 0.3534555 0.5632535 0.938153 1.000903 1.93285 XP_011100331.1 transcription factor MYB39-like [Sesamum indicum] Q9M0Y5|MYB74_ARATH Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1 sind:105178537 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to ethylene (GO:0009723);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: response to jasmonic acid (GO:0009753);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212); "PF00249.30,PF13921.5" Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN15991_c0_g1_i1 12.96978384 21.08919095 4.850376729 0.229993495 -2.120335039 0.021668163 0.072205471 Down 1.207834 4.686726 3.466673 0 0.8534101 0.8465697 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN15996_c0_g1_i1 33.28627058 21.0448591 45.52768206 2.163363596 1.113276159 0.010408486 0.039346471 Up 1.180433 0.6815789 0.6869077 1.622108 1.606482 1.190405 PIN07802.1 Acyl-CoA reductase [Handroanthus impetiginosus] Q08891|FACR2_ARATH Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana OX=3702 GN=FAR2 PE=1 SV=2 sind:105162476 K13356 FAR alcohol-forming fatty acyl-CoA reductase ko00073|ko04146 "Cutin, suberine and wax biosynthesis|Peroxisome" KOG1221 Acyl-CoA reductase [I] METABOLISM Lipid transport and metabolism S ENOG410XS7R fatty-acyl-CoA reductase (alcohol-forming) activity "Biological Process: lipid metabolic process (GO:0006629);|Biological Process: suberin biosynthetic process (GO:0010345);|Biological Process: pollen exine formation (GO:0010584);|Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (GO:0016628);|Biological Process: long-chain fatty-acyl-CoA metabolic process (GO:0035336);|Molecular Function: fatty-acyl-CoA reductase (alcohol-forming) activity (GO:0080019);|Molecular Function: alcohol-forming fatty acyl-CoA reductase activity (GO:0102965);" "PF07993.11,PF03015.18" Male sterility protein|Male sterility protein TRINITY_DN15999_c0_g2_i1 38.53027035 77.06054071 0 0 #NAME? 1.14E-06 1.08E-05 Down 11.42063 3.485765 5.046047 1.62E-57 7.31E-40 9.89E-47 XP_012844968.1 "PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic [Erythranthe guttata]" Q8LDD3|CUT1D_ARATH "Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG4111UCM NA Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN16001_c0_g1_i2 33.50785731 21.10626814 45.90944647 2.17515698 1.121119523 0.011590514 0.043058206 Up 2.147864 0.9531501 1.412093 2.410148 2.251903 3.303186 XP_011097984.1 uncharacterized protein LOC105176778 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16002_c0_g1_i3 71.77355389 39.85212403 103.6949838 2.601993903 1.379617582 6.66E-06 5.56E-05 Up 1.745044 1.16383 1.455965 3.110335 2.93064 3.119234 XP_011094270.1 IAA-amino acid hydrolase ILR1-like 3 [Sesamum indicum] Q8H3C9|ILL7_ORYSJ IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ILL7 PE=2 SV=1 sind:105174017 K14664 ILR1 IAA-amino acid hydrolase -- -- -- -- -- -- -- E COG1473 amidohydrolase Molecular Function: hydrolase activity (GO:0016787); "PF01546.27,PF07687.13" Peptidase family M20/M25/M40|Peptidase dimerisation domain TRINITY_DN16004_c0_g2_i1 36.77192851 22.42179858 51.12205844 2.280015952 1.189043918 0.006055027 0.024946074 Up 3.812155 3.14884 4.065553 5.481525 6.195449 8.513432 XP_020553647.1 MYB-like transcription factor ETC3 [Sesamum indicum] Q8GV05|TRY_ARATH Transcription factor TRY OS=Arabidopsis thaliana OX=3702 GN=TRY PE=1 SV=1 sind:105173140 K09422 MYBP "transcription factor MYB, plant" -- -- -- -- -- -- -- K ENOG410YUWZ Transcription factor "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: trichome branching (GO:0010091);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);" -- -- TRINITY_DN16008_c0_g1_i2 182.2838384 85.33650521 279.2311717 3.272118667 1.71022507 7.46E-18 2.14E-16 Up 8.264345 7.396983 7.794583 21.00746 20.90881 20.19426 XP_020552687.1 ethylene-responsive transcription factor RAP2-3 [Sesamum indicum] P42736|RAP23_ARATH Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 GN=RAP2-3 PE=1 SV=2 sind:105171556 K09286 EREBP EREBP-like factor -- -- -- -- -- -- -- K ENOG41113EY Transcription factor "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: cell death (GO:0008219);|Biological Process: response to ethylene (GO:0009723);|Biological Process: response to cytokinin (GO:0009735);|Biological Process: response to jasmonic acid (GO:0009753);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: heat acclimation (GO:0010286);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: response to other organism (GO:0051707);" PF00847.19 AP2 domain TRINITY_DN16013_c0_g2_i1 22.41964166 31.48171718 13.35756614 0.424295983 -1.236857075 0.030296296 0.094968565 Down 2.063744 1.867911 1.320461 0.5557271 0.6818272 0.5809434 XP_011069800.1 protein NPGR1 [Sesamum indicum] Q9CB03|NPGR1_ARATH Protein NPGR1 OS=Arabidopsis thaliana OX=3702 GN=NPGR1 PE=1 SV=1 -- -- -- -- -- -- KOG4162 Predicted calmodulin-binding protein [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XQ09 Tetratricopeptide repeat Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: plasma membrane (GO:0005886); PF13432.5 Tetratricopeptide repeat TRINITY_DN16015_c0_g1_i2 46.05627392 30.38546254 61.72708529 2.031467687 1.022522417 0.009574043 0.036737918 Up 3.316351 2.654061 4.933607 6.023319 5.653811 6.281656 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16019_c0_g1_i2 15.53496492 31.06992983 0 0 #NAME? 2.04E-10 3.14E-09 Down 4.265953 2.367398 4.587338 1.60E-74 3.09E-59 2.15E-56 KDO63176.1 hypothetical protein CISIN_1g017363mg [Citrus sinensis] Q9FYC4|FAMT_ARATH Farnesoic acid carboxyl-O-methyltransferase OS=Arabidopsis thaliana OX=3702 GN=FAMT PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111PH9 methyltransferase Biological Process: response to molecule of fungal origin (GO:0002238);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: response to jasmonic acid (GO:0009753);|Molecular Function: farnesoic acid O-methyltransferase activity (GO:0019010);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: response to herbivore (GO:0080027); -- -- TRINITY_DN16020_c0_g1_i2 727.1768338 1058.053909 396.2997582 0.374555355 -1.416749145 6.05E-30 3.38E-28 Down 77.0546 72.39904 64.3592 19.36427 20.44782 24.84656 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16023_c0_g2_i2 25.12762862 7.315961322 42.93929592 5.869262293 2.553179183 3.29E-06 2.90E-05 Up 0.4145849 0.4033114 0.3470155 1.623361 2.17007 1.465755 PIN19036.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN16024_c0_g1_i1 381.4539257 252.9143844 509.9934671 2.016466831 1.011829675 5.43E-13 1.07E-11 Up 28.4131 25.89548 31.21232 44.49031 51.27908 43.36446 XP_011087847.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Sesamum indicum] Q8LDS4|NAKR1_ARATH Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1 -- -- -- -- -- -- KOG1603 Copper chaperone [P] METABOLISM Inorganic ion transport and metabolism S COG2608 heavy metal transport detoxification protein Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: flower development (GO:0009908);|Biological Process: root morphogenesis (GO:0010015);|Biological Process: phloem transport (GO:0010233);|Biological Process: metal ion transport (GO:0030001);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: sodium ion homeostasis (GO:0055078); PF00403.25 Heavy-metal-associated domain TRINITY_DN16030_c0_g1_i2 2.810365888 5.620731776 0 0 #NAME? 0.027658059 0.088302312 Down 1.332119 0.8613372 0.2270106 9.90E-75 4.14E-62 6.88E-79 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16030_c0_g3_i1 11.39162809 2.325609291 20.45764688 8.796682643 3.136959565 0.000319051 0.001892416 Up 0.16164 0.2310685 0.1828169 1.673151 1.31148 1.591745 PIN20062.1 hypothetical protein CDL12_07248 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z6NZ NA -- -- -- TRINITY_DN16032_c0_g1_i1 280.0302124 129.3360175 430.7244073 3.330274239 1.735640984 4.96E-26 2.29E-24 Up 8.633334 12.9979 12.09825 29.42497 32.7717 28.54062 XP_011081000.1 protein P21 [Sesamum indicum] P81370|TLP_ACTDE Thaumatin-like protein OS=Actinidia deliciosa OX=3627 GN=tlp PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YD4X thaumatin-like protein Cellular Component: extracellular region (GO:0005576);|Biological Process: killing of cells of other organism (GO:0031640);|Biological Process: defense response to fungus (GO:0050832); PF00314.16 Thaumatin family TRINITY_DN16038_c0_g1_i1 7.588404997 15.17680999 0 0 #NAME? 0.042041308 0.123455888 Down 0.000121274 1.881082 7.394412 1.94E-48 2.82E-51 5.77E-57 XP_021632573.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Manihot esculenta] P08770|TRA1_MAIZE Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG410ZCAC Pfam:hATC Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: transposition (GO:0032196);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN16038_c3_g2_i3 72.93298159 145.8659632 0 0 #NAME? 1.22E-35 8.41E-34 Down 12.05305 18.75568 16.25178 5.02E-49 1.83E-49 9.05E-52 XP_021632573.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Manihot esculenta] P08770|TRA1_MAIZE Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " -- -- -- Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: transposition (GO:0032196);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN16038_c3_g4_i1 22.87394109 44.59051714 1.15736504 0.025955407 -5.267821055 6.90E-07 6.78E-06 Down 4.686669 4.007054 9.150277 6.08E-14 0.004598976 0.3403543 XP_021603899.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Manihot esculenta] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN16040_c0_g1_i2 23.27954454 13.29046953 33.26861954 2.503193695 1.32376993 0.015586384 0.055115114 Up 0.99551 0.8797365 0.9773656 1.85375 1.354947 2.467048 XP_020553261.1 trihelix transcription factor GT-3b [Sesamum indicum] Q9SDW0|TGT3A_ARATH Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=1 SV=1 -- -- -- -- -- -- KOG4282 "Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain" [K] INFORMATION STORAGE AND PROCESSING Transcription K ENOG410YYXY Transcription factor "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: identical protein binding (GO:0042802);|Molecular Function: sequence-specific DNA binding (GO:0043565);" "PF13837.5,PF00249.30" Myb/SANT-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN16047_c0_g3_i1 29.27309073 18.66472456 39.88145689 2.136728927 1.095403894 0.036356638 0.110024659 Up 0.9086402 1.886375 1.529377 1.893281 3.676676 1.920767 XP_011077221.1 GRF1-interacting factor 1 isoform X1 [Sesamum indicum] Q8L8A5|GIF1_ARATH GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1 -- -- -- -- -- -- KOG3227 Calcium-responsive transcription coactivator [K] INFORMATION STORAGE AND PROCESSING Transcription K ENOG41128HA synovial sarcoma translocation gene on chromosome 18-like "Molecular Function: transcription coactivator activity (GO:0003713);|Cellular Component: nucleus (GO:0005634);|Biological Process: cell proliferation (GO:0008283);|Biological Process: adaxial/abaxial pattern specification (GO:0009955);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: positive regulation of transcription by RNA polymerase II (GO:0045944);|Biological Process: leaf development (GO:0048366);|Biological Process: cotyledon development (GO:0048825);" PF05030.11 SSXT protein (N-terminal region) TRINITY_DN16052_c0_g1_i2 41.03921395 82.0784279 0 0 #NAME? 2.20E-26 1.03E-24 Down 3.181825 2.874109 3.832918 0 0 0 XP_010656486.1 PREDICTED: uncharacterized protein LOC104880673 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YZDN NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF13976.5 GAG-pre-integrase domain TRINITY_DN1605_c0_g1_i1 7.708618307 13.87408323 1.543153387 0.111225611 -3.168439068 0.003887271 0.017058672 Down 1.97706 3.164604 2.532573 0 0 0.7577598 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16065_c0_g2_i1 50.94686205 69.27243444 32.62128965 0.470912996 -1.086467557 0.003475671 0.015502714 Down 2.891866 2.326195 2.002801 1.024739 0.8959392 0.7968614 PIN20683.1 hypothetical protein CDL12_06619 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41114ZW NA -- PF05553.10 Cotton fibre expressed protein TRINITY_DN16067_c0_g1_i1 358.106604 185.5629352 530.6502728 2.859678159 1.515852789 1.42E-13 2.94E-12 Up 20.48137 19.45348 19.64881 47.82184 37.35389 52.40051 XP_012850930.1 PREDICTED: uncharacterized protein LOC105970640 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41125P8 B12d protein -- -- -- TRINITY_DN16070_c0_g1_i2 141.2503946 43.65973028 238.841059 5.470511554 2.451675748 1.69E-25 7.57E-24 Up 4.046839 3.948388 4.716402 16.86783 18.94996 20.63232 XP_012836747.1 PREDICTED: plastid division protein PDV2-like [Erythranthe guttata] Q9FVL0|HBL1_MEDSA Non-symbiotic hemoglobin 1 OS=Medicago sativa OX=3879 GN=MHB1 PE=2 SV=1 -- -- -- -- -- -- KOG3378 Globins and related hemoproteins [C] METABOLISM Energy production and conversion C COG1018 "Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress (By similarity)" Cellular Component: cytoplasm (GO:0005737);|Cellular Component: nuclear matrix (GO:0016363);|Molecular Function: oxygen binding (GO:0019825);|Molecular Function: heme binding (GO:0020037);|Molecular Function: metal ion binding (GO:0046872); PF00042.21 Globin TRINITY_DN16077_c0_g1_i2 23.74650483 46.04406871 1.448940942 0.031468569 -4.989944626 1.19E-11 2.10E-10 Down 3.560707 3.418321 3.611097 0 0.2573708 0 KZV22124.1 hypothetical protein F511_11652 [Dorcoceras hygrometricum] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YB3X Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN1607_c0_g1_i1 7.955779744 13.66748874 2.244070747 0.164190422 -2.606558123 0.014385153 0.051590839 Down 4.240898 2.781808 1.509188 0 0.5018637 0.4965527 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16082_c0_g1_i1 253.6846481 150.9953699 356.3739263 2.360164596 1.238887476 3.18E-13 6.41E-12 Up 6.961555 7.443186 8.970699 14.68692 15.3924 14.38561 NP_001306621.1 peroxidase 73 precursor [Sesamum indicum] Q43873|PER73_ARATH Peroxidase 73 OS=Arabidopsis thaliana OX=3702 GN=PER73 PE=1 SV=1 sind:105177799 K00430 E1.11.1.7 peroxidase ko00940 Phenylpropanoid biosynthesis -- -- -- -- -- G ENOG4111FDS peroxidase Molecular Function: peroxidase activity (GO:0004601);|Cellular Component: extracellular region (GO:0005576);|Biological Process: response to oxidative stress (GO:0006979);|Molecular Function: heme binding (GO:0020037);|Biological Process: hydrogen peroxide catabolic process (GO:0042744);|Molecular Function: metal ion binding (GO:0046872); PF00141.22 Peroxidase TRINITY_DN16083_c0_g2_i1 18.91329852 27.73196466 10.09463239 0.364007113 -1.457961454 0.01830348 0.062971795 Down 1.359271 2.339744 1.244922 0.2972005 0.4515686 0.655864 PIN05690.1 Ubiquitin--protein ligase [Handroanthus impetiginosus] Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1 SV=1 -- -- -- -- -- -- KOG0167 FOG: Armadillo/beta-catenin-like repeats [S] POORLY CHARACTERIZED Function unknown S ENOG410XRTN U-box domain-containing protein "Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: cell surface receptor signaling pathway (GO:0007166);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: negative regulation of apoptotic process (GO:0043066);|Biological Process: negative regulation of immune response (GO:0050777);|Molecular Function: transmembrane receptor protein serine/threonine kinase binding (GO:0070696);|Biological Process: regulation of photoperiodism, flowering (GO:2000028);" -- -- TRINITY_DN16083_c1_g1_i1 91.99358087 42.57711989 141.4100419 3.321268377 1.731734305 1.90E-10 2.94E-09 Up 3.097875 3.552358 2.312292 6.462674 9.547371 8.08773 XP_012831804.1 PREDICTED: alpha carbonic anhydrase 7-like [Erythranthe guttata] Q8L817|ATCA7_ARATH Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana OX=3702 GN=ACA7 PE=2 SV=1 sind:105161349 K01674 cah carbonic anhydrase ko00910 Nitrogen metabolism KOG0382 Carbonic anhydrase [R] POORLY CHARACTERIZED General function prediction only P COG3338 Carbonic anhydrase Molecular Function: carbonate dehydratase activity (GO:0004089);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: chloroplast stroma (GO:0009570); PF00194.20 Eukaryotic-type carbonic anhydrase TRINITY_DN16084_c0_g1_i1 29.32463215 1.56044838 57.08881592 36.58487948 5.193175601 3.98E-10 5.93E-09 Up 0 0.9193764 0 5.450365 12.05029 8.537692 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16087_c0_g1_i1 17.68486391 24.93359668 10.43613114 0.418556989 -1.256504028 0.045270587 0.130931363 Down 3.364913 2.2052 2.941889 1.061022 0.6936732 1.103602 PIN25129.1 Flavin-containing amine oxidase [Handroanthus impetiginosus] Q9SU79|PAO5_ARATH Probable polyamine oxidase 5 OS=Arabidopsis thaliana OX=3702 GN=PAO5 PE=1 SV=1 vvi:100243887 K12259 "SMOX, PAO5" spermine oxidase ko00330|ko00410 Arginine and proline metabolism|beta-Alanine metabolism KOG0685 Flavin-containing amine oxidase [H] METABOLISM Coenzyme transport and metabolism S ENOG410XQW0 Polyamine oxidase Cellular Component: cytoplasm (GO:0005737);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: polyamine oxidase activity (GO:0046592);|Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);|Molecular Function: thermospermine oxidase activity (GO:1990534); "PF01593.23,PF13450.5" Flavin containing amine oxidoreductase|NAD(P)-binding Rossmann-like domain TRINITY_DN16092_c0_g1_i1 66.51553967 35.29552383 97.73555551 2.769063748 1.469398267 3.03E-06 2.69E-05 Up 2.779831 3.269491 2.326268 6.99338 6.692493 5.028815 XP_012851935.1 PREDICTED: uncharacterized protein LOC105971628 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111A3K Late embryogenesis abundant protein -- -- -- TRINITY_DN16094_c0_g1_i1 112.220072 154.6698762 69.77026782 0.451091509 -1.148507965 3.26E-06 2.88E-05 Down 18.91314 22.26739 18.80074 4.192073 8.105174 9.578461 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16099_c2_g1_i1 27.72589305 37.64509411 17.80669199 0.473014942 -1.080042339 0.030871445 0.096471671 Down 1.550985 1.103126 1.230666 0.5291532 0.5011212 0.4607543 XP_012841251.1 PREDICTED: putative late blight resistance protein homolog R1A-3 [Erythranthe guttata] Q6L400|R1B16_SOLDE Putative late blight resistance protein homolog R1B-16 OS=Solanum demissum OX=50514 GN=R1B-16 PE=3 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Molecular Function: ADP binding (GO:0043531); -- -- TRINITY_DN16102_c0_g1_i1 309.7522512 199.8414843 419.6630182 2.09997949 1.070375237 1.69E-12 3.21E-11 Up 9.775868 10.03485 8.456581 14.29006 15.39795 18.25046 XP_012851823.1 PREDICTED: F-box protein CPR30-like [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16104_c0_g1_i2 11.53964202 17.51989936 5.55938467 0.317318299 -1.655997373 0.035788756 0.108704673 Down 1.590165 0.6471899 1.77781 0.3951837 0.3271528 0.3272055 KYP48573.1 Transposon TX1 uncharacterized [Cajanus cajan] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZSSE Endonuclease/Exonuclease/phosphatase family -- -- -- TRINITY_DN16104_c0_g2_i3 16.44658497 26.24180562 6.651364326 0.253464431 -1.98014479 0.003380843 0.015140747 Down 1.334473 1.312925 1.443881 0.3323933 0.3236721 0.2120626 PNY15039.1 "cysteine-rich receptor-like protein kinase, partial [Trifolium pratense]" -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS82 Retrotransposon protein -- PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN16107_c0_g1_i1 54.28755032 17.01006068 91.56503996 5.382993141 2.428408587 8.88E-08 9.86E-07 Up 2.447022 2.819858 2.138788 11.0053 13.39892 7.320819 XP_022843226.1 uncharacterized protein LOC111366761 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF03732.16 Retrotransposon gag protein TRINITY_DN16119_c0_g2_i2 387.9095834 590.6704453 185.1487215 0.313455198 -1.67366884 2.87E-31 1.68E-29 Down 55.31963 55.68945 48.20152 14.32477 13.43574 12.46606 XP_012457946.1 PREDICTED: miraculin-like [Gossypium raimondii] P14716|SPOR2_IPOBA Sporamin B OS=Ipomoea batatas OX=4120 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: endopeptidase inhibitor activity (GO:0004866);|Cellular Component: vacuole (GO:0005773);|Molecular Function: nutrient reservoir activity (GO:0045735); PF00197.17 Trypsin and protease inhibitor TRINITY_DN16119_c0_g3_i1 3252.223636 6413.227396 91.21987658 0.014223708 -6.135558534 0 0 Down 609.0632 578.4616 601.9873 6.820319 7.423034 6.239403 CAN65022.1 hypothetical protein VITISV_027379 [Vitis vinifera] P35812|ITC_ALOMA Trypsin/chymotrypsin inhibitor OS=Alocasia macrorrhizos OX=4456 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867); PF00197.17 Trypsin and protease inhibitor TRINITY_DN16122_c0_g1_i3 318.0691842 458.5740689 177.5642994 0.387209638 -1.36881323 4.54E-19 1.40E-17 Down 30.63887 27.91501 27.95562 8.004717 8.023305 11.10033 PIN01038.1 Calmodulin and related proteins (EF-Hand superfamily) [Handroanthus impetiginosus] Q09011|CAST_SOLTU Calcium-binding protein CAST OS=Solanum tuberosum OX=4113 PE=2 SV=1 sly:101256817 K13448 CML calcium-binding protein CML ko04626 Plant-pathogen interaction KOG0027 Calmodulin and related proteins (EF-Hand superfamily) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms DTZ COG5126 Calcium-binding protein Molecular Function: calcium ion binding (GO:0005509); "PF13405.5,PF00036.31,PF13499.5,PF13202.5,PF13833.5" EF-hand domain|EF hand|EF-hand domain pair|EF hand|EF-hand domain pair TRINITY_DN16127_c1_g1_i1 9.91416144 18.74161717 1.086705707 0.057983561 -4.108212247 0.000132708 0.000858119 Down 3.009685 5.812956 2.534571 1.07E-06 0.5855114 1.07E-05 XP_011074172.1 uncharacterized protein LOC105158947 [Sesamum indicum] -- -- sind:105158947 K15032 MTERFD "mTERF domain-containing protein, mitochondrial" -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16137_c0_g1_i2 14.96489108 25.88226649 4.04751566 0.156381809 -2.676855391 0.000406077 0.002348458 Down 3.276263 1.850939 1.766747 0.2380527 0.4656584 0.178618 EYU24547.1 hypothetical protein MIMGU_mgv1a013263mg [Erythranthe guttata] Q9FLT3|GL34_ARATH Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana OX=3702 GN=At5g61750 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHG8 germin-like protein Cellular Component: cell wall (GO:0005618);|Molecular Function: manganese ion binding (GO:0030145);|Molecular Function: nutrient reservoir activity (GO:0045735);|Cellular Component: apoplast (GO:0048046); "PF00190.21,PF07883.10" Cupin|Cupin domain TRINITY_DN16139_c0_g1_i1 58.77977629 90.8444203 26.71513228 0.294075654 -1.765740746 4.22E-07 4.28E-06 Down 7.051355 6.793737 6.814125 1.460171 1.814978 1.551648 XP_011097033.1 aspartic proteinase nepenthesin-1 [Sesamum indicum] Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis OX=150966 GN=nep1 PE=1 SV=1 -- -- -- -- -- -- KOG1339 Aspartyl protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XNV7 aspartic Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Cellular Component: extracellular region (GO:0005576); "PF14543.5,PF00026.22" Xylanase inhibitor N-terminal|Eukaryotic aspartyl protease TRINITY_DN16146_c0_g2_i1 253.3464207 484.9941648 21.69867647 0.044740077 -4.482288438 4.38E-64 6.54E-62 Down 6.51663 8.198307 6.579102 0.241301 0.1752721 0.3417232 PNX92638.1 "retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Trifolium pratense]" Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF07727.13,PF14223.5,PF00665.25,PF13976.5" Reverse transcriptase (RNA-dependent DNA polymerase)|gag-polypeptide of LTR copia-type|Integrase core domain|GAG-pre-integrase domain TRINITY_DN16146_c0_g3_i1 10.95788045 21.9157609 0 0 #NAME? 1.47E-07 1.58E-06 Down 1.399117 3.540053 3.798103 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16148_c0_g1_i1 104.1839925 37.87337256 170.4946124 4.501701349 2.170470349 1.68E-16 4.32E-15 Up 1.703192 1.829434 1.245297 5.457063 5.430603 6.44519 XP_020555102.1 patatin-like protein 2 [Sesamum indicum] O48723|PLP2_ARATH Patatin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLP2 PE=1 SV=1 -- -- -- -- -- -- KOG0513 Ca2+-independent phospholipase A2 [I] METABOLISM Lipid transport and metabolism S COG3621 Patatin group Molecular Function: phospholipase activity (GO:0004620);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: lipid metabolic process (GO:0006629);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: lipase activity (GO:0016298);|Biological Process: oxylipin biosynthetic process (GO:0031408);|Biological Process: response to cadmium ion (GO:0046686);|Molecular Function: acylglycerol lipase activity (GO:0047372);|Biological Process: defense response to virus (GO:0051607);|Biological Process: cellular response to hypoxia (GO:0071456); PF01734.21 Patatin-like phospholipase TRINITY_DN16162_c0_g2_i1 14.04331201 6.852485808 21.23413821 3.09874968 1.631686217 0.019787367 0.067216041 Up 2.737997 0 1.087391 2.11774 3.580489 4.028263 ABB52808.1 MPBQ/MSBQ methyltransferase 2 [Helianthus annuus] P23525|IN37_SPIOL "2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1" vra:106772053 K12502 "VTE3, APG1" MPBQ/MSBQ methyltransferase ko00130 Ubiquinone and other terpenoid-quinone biosynthesis KOG1540 Ubiquinone biosynthesis methyltransferase COQ5 [H] METABOLISM Coenzyme transport and metabolism Q COG0500 Methyltransferase "Cellular Component: chloroplast inner membrane (GO:0009706);|Biological Process: vitamin E biosynthetic process (GO:0010189);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity (GO:0102550);" -- -- TRINITY_DN16163_c0_g1_i2 19.46159117 5.71958887 33.20359347 5.805241291 2.537356033 0.000112141 0.000735926 Up 0.2677274 0.7726634 0.2032225 2.55885 1.094296 2.196473 XP_020549386.1 FT-interacting protein 1-like [Sesamum indicum] Q60EW9|FTIP7_ORYSJ FT-interacting protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=FTIP7 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XRQN Multiple C2 and transmembrane domain-containing protein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); PF08372.9 Plant phosphoribosyltransferase C-terminal TRINITY_DN16163_c0_g2_i1 25.23063857 11.72382076 38.73745638 3.304166549 1.724286409 0.001325831 0.006700452 Up 0.4190084 0.3657893 0.7215604 1.326907 1.783837 0.8852617 XP_012840189.1 PREDICTED: protein QUIRKY-like [Erythranthe guttata] Q60EW9|FTIP7_ORYSJ FT-interacting protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=FTIP7 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XRQN Multiple C2 and transmembrane domain-containing protein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); PF00168.29 C2 domain TRINITY_DN16174_c0_g1_i5 114.6479963 72.94441895 156.3515736 2.143434355 1.099924234 6.42E-06 5.38E-05 Up 3.588187 3.532722 3.916703 6.854529 6.080555 6.156896 XP_011075371.1 probable inactive purple acid phosphatase 16 [Sesamum indicum] Q9SR79|PPA16_ARATH Probable inactive purple acid phosphatase 16 OS=Arabidopsis thaliana OX=3702 GN=PAP16 PE=2 SV=1 -- -- -- -- -- -- KOG1432 Predicted DNA repair exonuclease SIA1 [R] POORLY CHARACTERIZED General function prediction only S COG1409 "Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes (By similarity)" "Molecular Function: acid phosphatase activity (GO:0003993);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: membrane (GO:0016020);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);|Molecular Function: metal ion binding (GO:0046872);" PF00149.27 Calcineurin-like phosphoesterase TRINITY_DN16180_c0_g1_i1 72.11839846 96.94186896 47.29492797 0.487868951 -1.035434423 0.004174013 0.018165961 Down 6.51875 6.421516 4.137113 3.084058 2.159096 1.437222 XP_011085626.2 GDSL esterase/lipase At1g29670 [Sesamum indicum] Q9C7N4|GDL15_ARATH GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana OX=3702 GN=At1g29670 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG411139P GDSL esterase lipase At1g29670-like "Cellular Component: cell wall (GO:0005618);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid (GO:0009534);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);|Cellular Component: apoplast (GO:0048046);" PF00657.21 GDSL-like Lipase/Acylhydrolase TRINITY_DN16181_c0_g2_i2 66.35067019 98.58453494 34.11680544 0.346066505 -1.530878782 0.007697096 0.030613711 Down 16.10412 22.37739 12.02007 8.862405 4.248753 0.8322118 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16186_c1_g2_i1 4.850929276 9.701858553 0 0 #NAME? 0.002214522 0.010496376 Down 2.894067 0.8560799 0.9170762 1.87E-37 0 2.62E-37 XP_019197160.1 PREDICTED: uncharacterized protein LOC109191027 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16196_c0_g2_i2 21.68480254 43.36960509 0 0 #NAME? 2.31E-14 5.05E-13 Down 2.519576 3.042857 4.365813 0 0 0 XP_021617969.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Manihot esculenta] Q9M2N5|DSLE_ARATH Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); PF02892.14 BED zinc finger TRINITY_DN16198_c0_g2_i1 8.476513732 15.86632176 1.086705707 0.068491344 -3.867934513 0.012066897 0.044518258 Down 0.3699338 3.649547 2.527267 0.05766841 0.3332573 0.0236473 XP_011075206.1 putative F-box/LRR-repeat protein At5g02930 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16202_c0_g1_i5 1330.505903 826.5010477 1834.510757 2.219610928 1.150306811 1.79E-39 1.41E-37 Up 22.87152 24.69369 24.5815 42.9108 41.74557 44.58298 XP_011076303.1 cytochrome P450 704C1 [Sesamum indicum] Q50EK3|C04C1_PINTA Cytochrome P450 704C1 OS=Pinus taeda OX=3352 GN=CYP704C1 PE=2 SV=1 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN16210_c0_g1_i1 53.96984779 88.06153589 19.8781597 0.225730332 -2.147327807 1.05E-08 1.31E-07 Down 8.075409 6.250247 6.68957 1.369281 1.715139 0.7058002 XP_011076616.1 transcription factor SCREAM2 [Sesamum indicum] Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YJUZ NA "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: protein dimerization activity (GO:0046983);" -- -- TRINITY_DN16215_c0_g2_i2 13.58369299 25.71844505 1.448940942 0.05633859 -4.149732721 4.94E-06 4.22E-05 Down 3.866212 7.069008 3.514975 0 0.6218218 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16228_c0_g2_i1 30.610026 48.76974796 12.45030404 0.255287439 -1.969805543 0.009370106 0.036106725 Down 4.416279 12.7371 9.249679 3.312597 1.865856 0.09631639 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16231_c0_g2_i1 12.42922924 5.959427522 18.89903096 3.171282962 1.66506661 0.041006636 0.121020366 Up 0 1.825684 1.088912 3.908643 1.731864 1.816877 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16234_c0_g1_i1 522.9484329 267.6058767 778.290989 2.908347898 1.540199855 2.34E-35 1.58E-33 Up 20.04575 18.31684 19.45972 44.79143 46.5401 44.49972 PIN14601.1 putative chitinase [Handroanthus impetiginosus] Q9M2U5|CHI5_ARATH Endochitinase EP3 OS=Arabidopsis thaliana OX=3702 GN=EP3 PE=1 SV=1 sind:105171971 K01183 E3.2.1.14 chitinase ko00520 Amino sugar and nucleotide sugar metabolism KOG4742 Predicted chitinase [R] POORLY CHARACTERIZED General function prediction only G COG3979 chitinase Biological Process: polysaccharide catabolic process (GO:0000272);|Molecular Function: chitinase activity (GO:0004568);|Cellular Component: cell wall (GO:0005618);|Biological Process: chitin catabolic process (GO:0006032);|Biological Process: defense response (GO:0006952);|Molecular Function: chitin binding (GO:0008061);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to bacterium (GO:0009617);|Biological Process: somatic embryogenesis (GO:0010262);|Biological Process: cell wall macromolecule catabolic process (GO:0016998); "PF00182.18,PF00187.18" Chitinase class I|Chitin recognition protein TRINITY_DN16239_c0_g1_i1 16.74283655 33.4856731 0 0 #NAME? 5.13E-05 0.000362566 Down 11.25838 6.939801 2.274413 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16239_c0_g2_i1 16.38932322 32.77864644 0 0 #NAME? 2.36E-10 3.61E-09 Down 2.182328 5.091319 4.446081 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16258_c0_g1_i3 52.15104875 74.47710533 29.82499216 0.400458531 -1.320275243 0.000311469 0.001852287 Down 6.677173 8.284633 5.568633 1.821058 2.127972 2.695366 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16259_c0_g1_i3 49.14807513 80.89879973 17.39735053 0.215050787 -2.217250685 1.07E-08 1.35E-07 Down 3.393341 2.822402 4.458615 0.6532996 0.7012656 0.5210108 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16261_c0_g1_i1 839.1029239 1132.312337 545.8935111 0.482105064 -1.052580512 1.31E-23 5.30E-22 Down 109.7903 105.4979 118.853 41.90985 38.09184 50.17646 PIM97286.1 Defense-related protein containing SCP domain [Handroanthus impetiginosus] P11670|PRB1_TOBAC Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1 -- -- -- -- -- -- KOG3017 Defense-related protein containing SCP domain [S] POORLY CHARACTERIZED Function unknown S COG2340 Scp-like extracellular Cellular Component: extracellular region (GO:0005576);|Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607); PF00188.25 Cysteine-rich secretory protein family TRINITY_DN16264_c0_g1_i1 23.75786815 33.71227039 13.80346592 0.409449312 -1.288243231 0.015881214 0.055948464 Down 2.453478 1.947332 2.481061 0.5672975 0.7694157 0.9701584 XP_012836131.1 PREDICTED: 125 kDa kinesin-related protein-like [Erythranthe guttata] O23826|KN5C_TOBAC Kinesin-like protein KIN-5C OS=Nicotiana tabacum OX=4097 GN=KIN5C PE=1 SV=1 sind:105161746 K10398 "KIF11, EG5" kinesin family member 11 -- -- KOG0243 Kinesin-like protein [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5059 Kinesin family member Molecular Function: microtubule motor activity (GO:0003777);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: spindle (GO:0005819);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based movement (GO:0007018);|Molecular Function: microtubule binding (GO:0008017); PF00225.22 Kinesin motor domain TRINITY_DN16267_c0_g1_i1 4.039781714 8.079563428 0 0 #NAME? 0.004061189 0.017727623 Down 0.591318 1.302974 0.8975256 0 3.03E-40 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16267_c1_g2_i1 8.709741733 17.41948347 0 0 #NAME? 4.32E-06 3.72E-05 Down 3.616518 1.636267 3.586244 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1626_c0_g1_i1 4.778117703 9.556235405 0 0 #NAME? 0.001524456 0.007585182 Down 2.510013 0.7176713 1.170087 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16285_c0_g1_i1 221.8708549 147.3474688 296.3942411 2.011532628 1.008295139 6.85E-09 8.82E-08 Up 5.7188 5.239196 4.338027 8.20612 8.379287 8.24049 XP_020554265.1 berberine bridge enzyme-like 18 [Sesamum indicum] Q9SVG5|BBE18_ARATH Berberine bridge enzyme-like 18 OS=Arabidopsis thaliana OX=3702 GN=At4g20820 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: FAD binding (GO:0071949); "PF01565.22,PF08031.11" FAD binding domain|Berberine and berberine like TRINITY_DN16285_c0_g2_i1 100.013558 57.44227791 142.5848381 2.48222813 1.311635713 6.49E-07 6.41E-06 Up 2.968182 2.786669 3.392301 5.119154 6.245974 7.009358 XP_011097020.1 berberine bridge enzyme-like 18 [Sesamum indicum] A6P6V9|CBDAS_CANSA Cannabidiolic acid synthase OS=Cannabis sativa OX=3483 GN=CBDAS PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: apoplast (GO:0048046);|Molecular Function: FAD binding (GO:0071949);|Molecular Function: cannabidiolate synthase activity (GO:0102779); -- -- TRINITY_DN16286_c0_g1_i2 160.1183297 283.4919208 36.7447386 0.129614765 -2.947698027 8.49E-37 6.05E-35 Down 25.70001 25.06247 25.66402 3.021409 2.515347 2.476615 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00257.18 Dehydrin TRINITY_DN16289_c0_g1_i3 337.6121416 60.49176423 614.732519 10.16225145 3.345148163 8.36E-90 1.89E-87 Up 4.044048 4.793307 3.483568 32.24649 33.66258 34.64875 EYU31951.1 hypothetical protein MIMGU_mgv1a024738mg [Erythranthe guttata] Q5PP62|SPX3_ARATH SPX domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPX3 PE=2 SV=1 -- -- -- -- -- -- KOG1161 "Protein involved in vacuolar polyphosphate accumulation, contains SPX domain" [P] METABOLISM Inorganic ion transport and metabolism O ENOG410YBCG SPX domain Biological Process: cellular response to phosphate starvation (GO:0016036);|Biological Process: positive regulation of cellular response to phosphate starvation (GO:0080040); PF03105.18 SPX domain TRINITY_DN16291_c0_g1_i1 23.97171028 2.366174951 45.5772456 19.26199311 4.267685087 5.37E-11 8.82E-10 Up 0.1919032 0 0.08556374 1.521868 1.667056 1.320838 PIM99090.1 Shikimate O-hydroxycinnamoyltransferase [Handroanthus impetiginosus] Q9SND9|Y3028_ARATH Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana OX=3702 GN=At3g50280 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YADF transferase) family "Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);" PF02458.14 Transferase family TRINITY_DN162_c0_g1_i1 8.54115585 17.0823117 0 0 #NAME? 6.99E-06 5.82E-05 Down 3.241574 3.127181 1.754046 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16300_c0_g1_i2 33.85861199 55.08694494 12.63027903 0.229278989 -2.124823943 6.02E-06 5.07E-05 Down 2.938534 3.095057 3.023954 0.2666106 0.7435914 0.6371526 XP_012435210.1 "PREDICTED: 50S ribosomal protein L15, chloroplastic-like isoform X1 [Gossypium raimondii]" P22798|RK15_SPIOL "50S ribosomal protein L15, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL15 PE=1 SV=3" tcc:TCM_009861 K02876 "RP-L15, MRPL15, rplO" large subunit ribosomal protein L15 ko03010 Ribosome KOG0846 Mitochondrial/chloroplast ribosomal protein L15/L10 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0200 Binds to the 23S rRNA (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: large ribosomal subunit (GO:0015934); -- -- TRINITY_DN16301_c0_g1_i1 143.8957759 259.1316559 28.65989586 0.110599748 -3.176579995 6.78E-37 4.86E-35 Down 28.61554 28.9529 23.90556 2.266295 2.259561 2.693997 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16308_c0_g1_i3 20.00870657 11.13132677 28.88608637 2.595026358 1.375749192 0.020233511 0.068409041 Up 0.6859313 0.5560684 0.8287514 1.387673 1.644985 1.212967 XP_011095851.1 uncharacterized protein LOC105175194 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YXFJ NA -- -- -- TRINITY_DN16315_c0_g1_i1 17.88809746 26.50024545 9.27594947 0.350032587 -1.514438856 0.018135308 0.062464226 Down 2.1428 1.510811 1.499315 0.3158085 0.6338305 0.5215751 XP_011084671.1 serine/threonine-protein kinase TIO [Sesamum indicum] Q2QAV0|TIO_ARATH Serine/threonine-protein kinase TIO OS=Arabidopsis thaliana OX=3702 GN=TIO PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T ENOG410XRQ6 Serine threonine kinase Biological Process: cytokinesis by cell plate formation (GO:0000911);|Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoskeleton (GO:0005856);|Biological Process: male meiosis cytokinesis (GO:0007112);|Cellular Component: phragmoplast (GO:0009524);|Biological Process: embryo sac cellularization (GO:0009558);|Molecular Function: kinesin binding (GO:0019894); "PF00514.22,PF13646.5,PF13513.5,PF02985.21" Armadillo/beta-catenin-like repeat|HEAT repeats|HEAT-like repeat|HEAT repeat TRINITY_DN16318_c0_g1_i2 45.44112029 84.97116857 5.911072008 0.06956562 -3.845481705 2.95E-16 7.49E-15 Down 3.450764 3.392815 2.538918 0.124989 0.2484796 0.13522 AHK06496.1 "geraniol synthase, partial [Pogostemon cablin]" Q6USK1|GERS_OCIBA "Geraniol synthase, chloroplastic OS=Ocimum basilicum OX=39350 GN=GES PE=1 SV=1" sind:105163844 K15086 TPS14 (3S)-linalool synthase ko00902 Monoterpenoid biosynthesis -- -- -- -- -- O ENOG410YC0W R-linalool synthase Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: terpene synthase activity (GO:0010333);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Molecular Function: hydrolase activity (GO:0016787);|Molecular Function: manganese ion binding (GO:0030145);|Biological Process: geranyl diphosphate metabolic process (GO:0033383);|Molecular Function: protein homodimerization activity (GO:0042803); "PF03936.15,PF01397.20" "Terpene synthase family, metal binding domain|Terpene synthase, N-terminal domain" TRINITY_DN16320_c0_g2_i2 44.47909355 26.68643426 62.27175284 2.333460972 1.222471338 0.001862243 0.00903611 Up 2.477005 1.47513 1.43671 2.283507 3.630396 4.285768 XP_012833963.1 "PREDICTED: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase [Erythranthe guttata]" A8MR93|ALG12_ARATH "Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase OS=Arabidopsis thaliana OX=3702 GN=ALG12 PE=1 SV=1" sind:105169914 K03847 ALG12 "alpha-1,6-mannosyltransferase" ko00510|ko00513 N-Glycan biosynthesis|Various types of N-glycan biosynthesis KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410XR38 "asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae)" "Molecular Function: mannosyltransferase activity (GO:0000030);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: protein N-linked glycosylation (GO:0006487);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: ubiquitin-dependent ERAD pathway (GO:0030433);|Molecular Function: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity (GO:0052917);" -- -- TRINITY_DN16326_c0_g1_i2 141.9883414 283.2051062 0.771576693 0.002724445 -8.519821997 1.04E-30 6.02E-29 Down 25.3535 19.67926 32.68301 1.07E-59 1.40E-69 0.1628193 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16326_c0_g2_i1 74.22742295 148.4548459 0 0 #NAME? 2.66E-46 2.58E-44 Down 30.60964 29.87313 23.10064 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16326_c0_g3_i2 33.52070436 67.04140871 0 0 #NAME? 1.54E-10 2.41E-09 Down 4.067544 7.202077 3.168071 1.65E-55 5.42E-79 3.74E-29 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16329_c0_g1_i2 251.7455706 140.4022039 363.0889373 2.586062948 1.370757393 6.32E-16 1.57E-14 Up 12.39686 10.19311 12.29923 25.68873 23.90389 23.28869 XP_022889487.1 calcium-binding protein CML38-like [Olea europaea var. sylvestris] Q9SRE6|CML38_ARATH Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=2 SV=1 pper:PRUPE_ppa025431mg K13448 CML calcium-binding protein CML ko04626 Plant-pathogen interaction KOG0027 Calmodulin and related proteins (EF-Hand superfamily) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms DTZ COG5126 Calcium-binding protein Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to wounding (GO:0009611); "PF13833.5,PF00036.31,PF13499.5,PF13405.5,PF13202.5" EF-hand domain pair|EF hand|EF-hand domain pair|EF-hand domain|EF hand TRINITY_DN16333_c0_g2_i1 18.34295654 32.30744655 4.378466519 0.135524995 -2.883369146 4.18E-05 0.000300608 Down 3.849448 2.362035 5.415561 0.6020754 0.6016808 0 PIN06365.1 Sulfotransferase [Handroanthus impetiginosus] P52837|F4ST_FLACH Flavonol 4'-sulfotransferase OS=Flaveria chlorifolia OX=4228 PE=1 SV=1 -- -- -- -- -- -- KOG1584 Sulfotransferase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111H56 Sulfotransferase Cellular Component: cytoplasm (GO:0005737);|Molecular Function: quercetin-3-sulfate 4'-sulfotransferase activity (GO:0047366); -- -- TRINITY_DN16334_c0_g1_i1 250.2758343 334.9789402 165.5727283 0.494278023 -1.016605333 1.27E-09 1.79E-08 Down 45.33501 51.17627 49.00401 19.53798 15.6774 22.87953 XP_012851798.1 PREDICTED: uncharacterized protein LOC105971487 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16337_c0_g2_i1 293.5623639 143.7038948 443.4208331 3.085656332 1.62557739 1.08E-24 4.63E-23 Up 10.05693 11.49872 9.040709 24.73608 25.14909 26.1899 XP_011086775.1 "flavonoid 3',5'-methyltransferase-like [Sesamum indicum]" C7AE94|FAOMT_VITVI "Flavonoid 3',5'-methyltransferase OS=Vitis vinifera OX=29760 GN=FAOMT PE=1 SV=1" -- -- -- -- -- -- KOG1663 O-methyltransferase [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " S COG4122 O-methyltransferase Cellular Component: cytoplasm (GO:0005737);|Molecular Function: O-methyltransferase activity (GO:0008171);|Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);|Biological Process: cyanidin 3-O-glucoside biosynthetic process (GO:0033485);|Biological Process: delphinidin 3-O-glucoside biosynthetic process (GO:0033486);|Biological Process: pigmentation (GO:0043473);|Molecular Function: metal ion binding (GO:0046872); "PF01596.16,PF13578.5" O-methyltransferase|Methyltransferase domain TRINITY_DN16343_c0_g1_i2 47.96852457 26.94907798 68.98797117 2.559938089 1.356108919 0.000189065 0.001182127 Up 1.104064 1.066509 0.6030575 2.080087 1.888772 1.723657 XP_022879429.1 alpha-dioxygenase 1 [Olea europaea var. sylvestris] Q9SGH6|DOX1_ARATH Alpha-dioxygenase 1 OS=Arabidopsis thaliana OX=3702 GN=DOX1 PE=1 SV=1 gra:105780850 K10529 DOX1 alpha-dioxygenase ko00592 alpha-Linolenic acid metabolism KOG2408 Peroxidase/oxygenase [R] POORLY CHARACTERIZED General function prediction only S ENOG410XPZ3 prostaglandin G H synthase and cyclooxygenase "Biological Process: fatty acid alpha-oxidation (GO:0001561);|Molecular Function: peroxidase activity (GO:0004601);|Biological Process: lipid metabolic process (GO:0006629);|Biological Process: response to oxidative stress (GO:0006979);|Biological Process: cell death (GO:0008219);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: systemic acquired resistance (GO:0009627);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: response to salicylic acid (GO:0009751);|Cellular Component: monolayer-surrounded lipid storage body (GO:0012511);|Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);|Molecular Function: heme binding (GO:0020037);|Biological Process: oxylipin biosynthetic process (GO:0031408);|Biological Process: cellular response to reactive oxygen species (GO:0034614);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: defense response to fungus (GO:0050832);|Biological Process: cellular response to salicylic acid stimulus (GO:0071446);|Biological Process: cellular response to nitric oxide (GO:0071732);|Biological Process: (R)-2-hydroxy-alpha-linolenic acid biosynthetic process (GO:1902609);" PF03098.14 Animal haem peroxidase TRINITY_DN16346_c0_g1_i5 311.3991452 134.578801 488.2194893 3.627759244 1.859078715 9.24E-33 5.71E-31 Up 7.684515 6.765613 6.066775 20.59432 19.40271 20.0822 EYU32314.1 hypothetical protein MIMGU_mgv1a008863mg [Erythranthe guttata] Q40578|AOX2_TOBAC "Ubiquinol oxidase 2, mitochondrial OS=Nicotiana tabacum OX=4097 GN=AOX2 PE=1 SV=2" fve:101307016 K17893 "AOX1, AOX2" ubiquinol oxidase -- -- -- -- -- -- -- S ENOG410YFEH alternative oxidase Cellular Component: mitochondrial inner membrane (GO:0005743);|Molecular Function: alternative oxidase activity (GO:0009916);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872);|Cellular Component: respiratory chain (GO:0070469);|Molecular Function: ubiquinol:oxygen oxidoreductase activity (GO:0102721); PF01786.16 Alternative oxidase TRINITY_DN16347_c0_g1_i1 6.10505067 12.21010134 0 0 #NAME? 0.010945357 0.040986851 Down 0.2209817 2.902136 1.162962 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16347_c1_g1_i1 5.108931405 10.21786281 0 0 #NAME? 0.000965833 0.005062594 Down 1.827515 2.742171 1.054883 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16347_c2_g1_i1 72.02415588 143.6625234 0.385788347 0.002685379 -8.540658481 1.47E-43 1.32E-41 Down 8.863494 8.112547 9.049511 0 0 0.05903797 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16347_c2_g2_i1 25.47932217 42.01082909 8.947815244 0.212988304 -2.231153885 4.01E-05 0.000289078 Down 2.513127 2.621434 2.892244 0.4300366 0.3697619 0.5303082 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16347_c2_g4_i1 10.74374562 21.48749124 0 0 #NAME? 2.91E-07 3.02E-06 Down 1.981244 2.060772 1.202043 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16347_c2_g5_i1 19.6328268 35.61693151 3.648722099 0.102443471 -3.287100051 1.90E-06 1.74E-05 Down 2.930562 1.80104 1.704722 0.2518389 0.2810178 1.19E-51 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16347_c3_g2_i1 14.31963153 28.63926305 0 0 #NAME? 1.29E-07 1.40E-06 Down 2.715586 1.012651 2.905842 0 1.45E-57 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16350_c0_g1_i1 2584.138988 1582.785947 3585.492029 2.265304437 1.179704949 3.19E-59 4.40E-57 Up 95.58074 101.9934 98.46199 181.9762 181.7037 177.3387 XP_011086578.1 glutathione transferase GST 23-like [Sesamum indicum] Q9FQA3|GST23_MAIZE Glutathione transferase GST 23 OS=Zea mays OX=4577 PE=2 SV=1 sind:105168264 K00799 "GST, gst" glutathione S-transferase ko00480 Glutathione metabolism KOG0406 Glutathione S-transferase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XSIX glutathione Stransferase Molecular Function: glutathione transferase activity (GO:0004364);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: glutathione metabolic process (GO:0006749);|Biological Process: defense response (GO:0006952); "PF02798.19,PF13409.5,PF13417.5,PF00043.24,PF13410.5" "Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, C-terminal domain|Glutathione S-transferase, C-terminal domain" TRINITY_DN16353_c0_g1_i5 25.35599 36.30672379 14.4052562 0.396765522 -1.333641432 0.012046671 0.044458826 Down 1.86456 1.992099 1.633175 0.747797 0.6035407 0.3998645 PIN06922.1 hypothetical protein CDL12_20517 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YE2A Protein of unknown function (DUF616) -- PF04765.12 Protein of unknown function (DUF616) TRINITY_DN16358_c0_g1_i1 50.94095139 24.21856512 77.66333766 3.206768744 1.681120318 1.72E-05 0.000133749 Up 0.8541633 1.292891 2.349999 3.803349 4.731683 3.056115 AKN09555.1 basic helix-loop-helix transcription factor [Salvia miltiorrhiza] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16359_c0_g1_i1 54.47373961 79.34183701 29.60564221 0.373140367 -1.422209651 6.02E-05 0.000418229 Down 7.763904 9.745486 9.898508 3.46753 2.745759 2.070129 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16364_c0_g1_i1 424.2891953 220.4577245 628.1206661 2.849166059 1.510539709 1.02E-28 5.42E-27 Up 13.97463 19.085 17.77242 41.17893 38.42169 37.13582 XP_011091856.1 "sigma factor binding protein 2, chloroplastic [Sesamum indicum]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZFI0 Sigma factor binding protein -- PF05678.13 VQ motif TRINITY_DN16367_c0_g2_i1 413.5889568 256.7508727 570.4270408 2.221714126 1.151673193 2.61E-12 4.87E-11 Up 31.54993 27.6434 24.59953 42.42955 51.9076 55.99994 XP_011093617.1 LOW QUALITY PROTEIN: uncharacterized protein LOC105173535 [Sesamum indicum] A6MVX0|EFTS_RHDSA "Elongation factor Ts, chloroplastic OS=Rhodomonas salina OX=52970 GN=tsf PE=3 SV=1" sind:105173535 K02357 "tsf, TSFM" elongation factor Ts -- -- KOG1071 "Mitochondrial translation elongation factor EF-Tsmt, catalyzes nucleotide exchange on EF-Tumt" [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0264 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity) Molecular Function: translation elongation factor activity (GO:0003746);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: chloroplast (GO:0009507); PF00889.18 Elongation factor TS TRINITY_DN16369_c0_g2_i2 42.30518734 26.35502518 58.25534949 2.210407658 1.144312465 0.002456868 0.011492237 Up 0.9197317 1.207334 0.4204404 1.858573 1.315829 1.332991 XP_011094483.1 glycosyltransferase family protein 64 protein C5 [Sesamum indicum] Q84WB7|GT645_ARATH Glycosyltransferase family protein 64 protein C5 OS=Arabidopsis thaliana OX=3702 GN=At5g04500 PE=2 SV=1 -- -- -- -- -- -- KOG1022 Acetylglucosaminyltransferase EXT2/exostosin 2 [GMW] METABOLISM|CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING Carbohydrate transport and metabolism |Cell wall/membrane/envelope biogenesis |Extracellular structures S ENOG410XQYV exostoses (multiple)-like 2 -- PF09258.9 Glycosyl transferase family 64 domain TRINITY_DN16374_c0_g1_i1 19.03248288 8.696421286 29.36854448 3.377083919 1.75577803 0.003246488 0.014621275 Up 0.5575209 0.9020223 0.3783772 1.370588 1.807697 1.77115 AKN09541.1 basic helix-loop-helix transcription factor [Salvia miltiorrhiza] Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YG6S Transcription factor "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: protein dimerization activity (GO:0046983);" PF00010.25 Helix-loop-helix DNA-binding domain TRINITY_DN16375_c0_g2_i2 34.60306902 2.606013604 66.60012444 25.55632263 4.675608353 3.41E-16 8.59E-15 Up 0.1710932 0.1667941 0.9170428 10.47054 9.137737 6.583276 XP_011091224.1 ethylene-responsive transcription factor ERF096 [Sesamum indicum] P93822|ERF97_ARATH Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=ERF14 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410ZN2I Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: defense response (GO:0006952);|Biological Process: ethylene-activated signaling pathway (GO:0009873); PF00847.19 AP2 domain TRINITY_DN16376_c0_g1_i3 2366.52998 1138.129695 3594.930265 3.158629706 1.659298816 1.29E-107 3.65E-105 Up 94.76619 87.35793 90.14333 235.6051 237.7329 220.4248 XP_011081000.1 protein P21 [Sesamum indicum] P81370|TLP_ACTDE Thaumatin-like protein OS=Actinidia deliciosa OX=3627 GN=tlp PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YD4X thaumatin-like protein Cellular Component: extracellular region (GO:0005576);|Biological Process: killing of cells of other organism (GO:0031640);|Biological Process: defense response to fungus (GO:0050832); PF00314.16 Thaumatin family TRINITY_DN16377_c0_g1_i1 29.4906822 44.31210933 14.66925506 0.331043935 -1.594905394 0.019447375 0.066264426 Down 6.306866 2.377337 7.119516 0.9054388 0.8825165 2.374952 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16378_c0_g1_i2 15.00176061 30.00352123 0 0 #NAME? 5.33E-10 7.82E-09 Down 6.644615 4.437233 5.29602 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1637_c0_g1_i1 13.92334406 26.39247324 1.454214891 0.055099607 -4.181814173 0.002570326 0.011950712 Down 1.693944 3.595912 0.9057162 0.09868044 0.1944608 0 KYP57718.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN16383_c0_g2_i1 20.05281511 33.05792965 7.04770057 0.213192437 -2.229771838 0.000295449 0.001765955 Down 2.188688 3.493819 3.136153 0.6927256 0.3906076 0.4331052 XP_020551412.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 [Sesamum indicum] Q7XSZ4|HACDA_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A OS=Oryza sativa subsp. japonica OX=39947 GN=PAS2A PE=2 SV=2 sind:105169658 K10703 "PHS1, PAS2" very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase ko01040|ko00062 Biosynthesis of unsaturated fatty acids|Fatty acid elongation -- -- -- -- -- S COG5198 Protein tyrosine phosphatase-like Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Biological Process: multicellular organism development (GO:0007275);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: very-long-chain 3-hydroxyacyl-CoA dehydratase activity (GO:0102158);|Molecular Function: 3-hydroxy-arachidoyl-CoA dehydratase activity (GO:0102343);|Molecular Function: 3-hydroxy-behenoyl-CoA dehydratase activity (GO:0102344);|Molecular Function: 3-hydroxy-lignoceroyl-CoA dehydratase activity (GO:0102345); -- -- TRINITY_DN16387_c0_g1_i2 228.2998426 434.3255881 22.27409701 0.051284331 -4.2853381 3.16E-82 6.68E-80 Down 37.01488 38.60472 36.12529 1.665107 1.514109 1.492572 PIN19200.1 Calmodulin and related proteins (EF-Hand superfamily) [Handroanthus impetiginosus] Q9ZQE6|CML30_ARATH Calmodulin-like protein 30 OS=Arabidopsis thaliana OX=3702 GN=CML30 PE=2 SV=1 cic:CICLE_v10029994mg K13448 CML calcium-binding protein CML ko04626 Plant-pathogen interaction KOG0027 Calmodulin and related proteins (EF-Hand superfamily) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms DTZ COG5126 Calcium-binding protein Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: mitochondrion (GO:0005739); "PF00036.31,PF13202.5,PF13499.5,PF13405.5,PF13833.5,PF10591.8,PF12763.6,PF14658.5" EF hand|EF hand|EF-hand domain pair|EF-hand domain|EF-hand domain pair|Secreted protein acidic and rich in cysteine Ca binding region|Cytoskeletal-regulatory complex EF hand|EF-hand domain TRINITY_DN16407_c0_g1_i2 230.2808657 146.040942 314.5207895 2.153648047 1.106782502 7.77E-08 8.70E-07 Up 7.499969 7.476754 9.802442 11.75434 15.83761 15.5632 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16408_c0_g1_i1 455.3350479 753.0774926 157.5926032 0.20926479 -2.256598506 4.37E-54 5.37E-52 Down 80.57753 71.25492 66.73548 12.9563 11.49492 12.50482 XP_011082492.1 monothiol glutaredoxin-S9-like [Sesamum indicum] O82255|GRC13_ARATH Glutaredoxin-C13 OS=Arabidopsis thaliana OX=3702 GN=GRXC13 PE=3 SV=1 sind:105165243 K03676 "grxC, GLRX, GLRX2" glutaredoxin 3 -- -- KOG1752 Glutaredoxin and related proteins [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0695 Glutaredoxin Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: cellular response to nitrogen starvation (GO:0006995);|Molecular Function: electron transfer activity (GO:0009055);|Molecular Function: protein disulfide oxidoreductase activity (GO:0015035);|Biological Process: cell redox homeostasis (GO:0045454); PF00462.23 Glutaredoxin TRINITY_DN16411_c0_g1_i3 35.02434281 50.302504 19.74618162 0.392548682 -1.349056515 0.002464698 0.011522146 Down 2.451312 2.076415 2.015249 0.7237746 0.5534574 0.7696511 PIN12992.1 hypothetical protein CDL12_14393 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YD2D NA -- -- -- TRINITY_DN16412_c0_g1_i2 86.44586905 169.6105252 3.281212915 0.019345574 -5.691852677 9.80E-43 8.56E-41 Down 19.30935 19.58299 14.88757 0.3415028 0.5058826 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16415_c0_g1_i1 17.70222854 25.80001407 9.604443014 0.37226503 -1.425597997 0.037053695 0.111633263 Down 4.306557 2.878978 1.532339 1.309634 0.7897015 0.5432902 XP_011069429.1 "uncharacterized protein LOC105155256, partial [Sesamum indicum]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN16423_c0_g1_i1 102.1234149 42.66629092 161.5805388 3.787077229 1.921084842 8.20E-13 1.60E-11 Up 2.718758 1.930659 3.286844 7.245473 7.932685 9.211731 PIN10873.1 hypothetical protein CDL12_16522 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z333 Protein of unknown function (DUF506) -- PF04720.11 PDDEXK-like family of unknown function TRINITY_DN16426_c0_g1_i2 112.5498527 70.93401694 154.1656884 2.173367518 1.119932156 5.80E-06 4.90E-05 Up 1.837277 1.313763 1.787381 2.688357 2.71481 3.290642 XP_011091314.1 malate dehydrogenase [Sesamum indicum] Q9FSF0|MDH_TOBAC Malate dehydrogenase OS=Nicotiana tabacum OX=4097 GN=MD1 PE=1 SV=1 sind:105171782 K00025 MDH1 malate dehydrogenase ko00710|ko00630|ko00620|ko00020|ko00270 Carbon fixation in photosynthetic organisms|Glyoxylate and dicarboxylate metabolism|Pyruvate metabolism|Citrate cycle (TCA cycle)|Cysteine and methionine metabolism KOG1496 Malate dehydrogenase [C] METABOLISM Energy production and conversion C COG0039 Catalyzes the reversible oxidation of malate to oxaloacetate (By similarity) Cellular Component: cytoplasm (GO:0005737);|Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: tricarboxylic acid cycle (GO:0006099);|Biological Process: malate metabolic process (GO:0006108);|Molecular Function: L-malate dehydrogenase activity (GO:0030060); "PF02866.17,PF00056.22" "lactate/malate dehydrogenase, alpha/beta C-terminal domain|lactate/malate dehydrogenase, NAD binding domain" TRINITY_DN16426_c0_g2_i1 46.48788188 28.83937663 64.13638714 2.223917249 1.153103107 0.002072356 0.009930379 Up 3.835194 2.739749 2.649064 6.235971 4.025662 6.407147 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16429_c2_g1_i2 62.02051482 90.21192072 33.82910893 0.374995995 -1.415052909 0.018978339 0.064914756 Down 17.71337 17.09098 7.564077 1.924954 3.737781 7.2681 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16429_c3_g1_i4 721.2870289 1018.276348 424.2977096 0.416682279 -1.262980349 5.44E-28 2.79E-26 Down 20.19346 18.08493 16.90262 5.66453 6.274061 6.626322 XP_012844644.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Erythranthe guttata] Q6JN46|EIX2_SOLLC Receptor-like protein EIX2 OS=Solanum lycopersicum OX=4081 GN=EIX2 PE=1 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF13855.5,PF12799.6,PF00560.32,PF08263.11" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine rich repeat N-terminal domain TRINITY_DN16429_c3_g2_i1 4.205687692 8.411375384 0 0 #NAME? 0.003518951 0.015660365 Down 1.765377 1.762479 0.8711978 0 0 0 XP_011080440.1 probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Sesamum indicum] Q6JN47|EIX1_SOLLC Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); -- -- TRINITY_DN16429_c3_g3_i1 441.7921189 833.7731497 49.81108815 0.059741775 -4.06511608 7.85E-139 3.13E-136 Down 24.79742 23.94179 24.88784 1.508259 0.8924429 1.158624 XP_012838419.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL1 [Erythranthe guttata] Q6JN46|EIX2_SOLLC Receptor-like protein EIX2 OS=Solanum lycopersicum OX=4081 GN=EIX2 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN16429_c3_g6_i1 5.013516206 10.02703241 0 0 #NAME? 0.00096391 0.005053095 Down 1.077412 1.891895 1.662749 0 0 0 XP_011080440.1 probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Sesamum indicum] Q6JN47|EIX1_SOLLC Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); PF08263.11 Leucine rich repeat N-terminal domain TRINITY_DN16429_c3_g7_i1 10.73078428 21.46156856 0 0 #NAME? 2.49E-07 2.61E-06 Down 1.815747 3.186828 2.338946 1.08E-25 2.52E-77 9.69E-20 EYU31382.1 hypothetical protein MIMGU_mgv1a018210mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16431_c0_g1_i3 110.0302426 62.09545817 157.965027 2.543906296 1.347045531 5.55E-08 6.35E-07 Up 4.339309 4.809365 4.118009 9.099923 8.818261 9.330039 PIN23310.1 Isoamyl acetate-hydrolyzing esterase [Handroanthus impetiginosus] Q6NMR9|GDL84_ARATH GDSL esterase/lipase At5g45920 OS=Arabidopsis thaliana OX=3702 GN=At5g45920 PE=2 SV=1 -- -- -- -- -- -- KOG3035 Isoamyl acetate-hydrolyzing esterase [I] METABOLISM Lipid transport and metabolism E COG2755 lipolytic protein G-D-S-L family "Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);" "PF13472.5,PF00657.21" GDSL-like Lipase/Acylhydrolase family|GDSL-like Lipase/Acylhydrolase TRINITY_DN16440_c0_g1_i2 15.61897846 24.96992363 6.268033295 0.251023327 -1.994106661 0.004963149 0.021067163 Down 1.855666 1.728046 1.186128 0.1706946 0.5571118 0.2354938 PIN21442.1 "Replication factor C, subunit RFC4 [Handroanthus impetiginosus]" F4KEM0|STIL4_ARATH Protein STICHEL-like 4 OS=Arabidopsis thaliana OX=3702 GN=At5g45720 PE=2 SV=1 -- -- -- -- -- -- KOG0989 "Replication factor C, subunit RFC4" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG2812 dna polymerase iii subunits gamma and tau Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: DNA replication factor C complex (GO:0005663);|Biological Process: DNA-dependent DNA replication (GO:0006261);|Cellular Component: DNA polymerase III complex (GO:0009360); -- -- TRINITY_DN16441_c0_g1_i1 33.30079907 45.69805147 20.90354666 0.457427527 -1.128384909 0.013629902 0.049347478 Down 8.199532 5.394037 5.364899 2.300366 1.804736 2.852327 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16441_c0_g2_i2 63.17472585 121.5957447 4.753706968 0.039094353 -4.676895958 4.77E-27 2.34E-25 Down 7.303157 8.210222 6.15084 0.2316947 0.4379807 0.08384032 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16442_c1_g1_i1 159.6306799 91.95775215 227.3036076 2.471826488 1.305577476 1.31E-10 2.05E-09 Up 8.982698 5.888282 4.939137 11.70081 14.35935 13.42637 PIN06428.1 Leucine-rich repeat protein [Handroanthus impetiginosus] Q6JN47|EIX1_SOLLC Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF12799.6,PF08263.11,PF13855.5" Leucine Rich repeats (2 copies)|Leucine rich repeat N-terminal domain|Leucine rich repeat TRINITY_DN16442_c1_g2_i1 10.63613157 0 21.27226315 Inf Inf 1.47E-05 0.000115812 Up 5.85E-06 2.31E-74 1.61E-21 2.920654 3.640042 0.7596125 XP_012841431.1 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Erythranthe guttata] Q6JN47|EIX1_SOLLC Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN16444_c0_g1_i2 77.86440293 109.3397179 46.38908795 0.424265663 -1.236960172 0.000306794 0.00182688 Down 6.77009 7.011534 4.447905 1.441758 1.880976 2.977576 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16445_c0_g1_i2 11.49155476 3.953667105 19.02944242 4.813111957 2.266969982 0.00462146 0.019818793 Up 0.9612894 0.3780455 0.2898814 1.916343 1.754261 2.64889 XP_011087485.1 universal stress protein A-like protein [Sesamum indicum] Q8LGG8|USPAL_ARATH Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XURP universal stress protein Cellular Component: plasma membrane (GO:0005886);|Molecular Function: AMP binding (GO:0016208); PF00582.25 Universal stress protein family TRINITY_DN16470_c0_g1_i3 45.91579377 72.75910555 19.07248199 0.262131892 -1.931635207 2.16E-06 1.96E-05 Down 4.058914 2.6425 3.105505 0.7035954 1.093236 0.2478981 PON91412.1 "Zinc finger, CCHC-type, partial [Trema orientale]" Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN16470_c0_g2_i1 16.42920202 31.31525066 1.543153387 0.049278015 -4.342912051 1.72E-07 1.84E-06 Down 3.293931 2.944946 1.90328 0 0 0.2885749 PKI44367.1 "hypothetical protein CRG98_035241, partial [Punica granatum]" Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN16470_c0_g3_i3 119.9942245 236.6914143 3.297034761 0.013929676 -6.165694467 3.06E-62 4.46E-60 Down 5.580379 6.016714 6.983886 0.1613384 0.04002516 0 CAN78509.1 hypothetical protein VITISV_031642 [Vitis vinifera] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF14223.5,PF03732.16,PF00665.25,PF13976.5" gag-polypeptide of LTR copia-type|Retrotransposon gag protein|Integrase core domain|GAG-pre-integrase domain TRINITY_DN16473_c0_g1_i1 198.4650268 396.9300535 0 0 #NAME? 3.25E-119 1.03E-116 Down 27.90966 30.03428 26.76488 0 0 0 XP_011091181.1 uncharacterized protein LOC105171687 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YQTQ HR-like lesion-inducing -- PF05514.10 HR-like lesion-inducing TRINITY_DN16480_c0_g1_i6 131.4826675 181.9608023 81.00453266 0.445175728 -1.167553159 3.81E-07 3.88E-06 Down 14.13054 12.77423 12.77371 6.157279 3.578564 4.490871 PIN00443.1 cytochrome b [Handroanthus impetiginosus] Q9C540|ACFR4_ARATH Probable transmembrane ascorbate ferrireductase 4 OS=Arabidopsis thaliana OX=3702 GN=CYB561D PE=2 SV=1 sind:105161383 K08360 CYB561 cytochrome b-561 -- -- KOG1619 Cytochrome b [C] METABOLISM Energy production and conversion O ENOG4111FKI Cytochrome Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: metal ion binding (GO:0046872); PF03188.15 Eukaryotic cytochrome b561 TRINITY_DN16484_c0_g1_i1 44.96309843 27.09694333 62.82925353 2.318684169 1.213306322 0.00177586 0.008673511 Up 1.202717 2.114745 1.722038 2.788921 3.298632 3.330932 XP_011076255.1 uncharacterized protein C24B11.05 [Sesamum indicum] Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC24B11.05 PE=3 SV=1 sind:105160531 K18551 SDT1 pyrimidine and pyridine-specific 5'-nucleotidase ko00760 Nicotinate and nicotinamide metabolism KOG3109 Haloacid dehalogenase-like hydrolase [R] POORLY CHARACTERIZED General function prediction only S COG1011 Hydrolase Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: pyrimidine nucleobase metabolic process (GO:0006206);|Molecular Function: nucleotidase activity (GO:0008252);|Molecular Function: 5'-nucleotidase activity (GO:0008253);|Biological Process: nucleotide catabolic process (GO:0009166); "PF13419.5,PF00702.25" Haloacid dehalogenase-like hydrolase|haloacid dehalogenase-like hydrolase TRINITY_DN16485_c0_g1_i2 1509.397687 759.1185429 2259.67683 2.976711413 1.573719362 5.92E-77 1.13E-74 Up 39.67153 39.29895 37.16394 97.27596 91.05298 90.42332 PIN02724.1 "Glucan endo-1,3-beta-D-glucosidase [Handroanthus impetiginosus]" F4J270|BG3_ARATH "Probable glucan endo-1,3-beta-glucosidase BG3 OS=Arabidopsis thaliana OX=3702 GN=BG3 PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- G ENOG410YAHP glucan endo-1-3-beta-glucosidase "Cellular Component: cell wall (GO:0005618);|Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: carbohydrate metabolic process (GO:0005975);|Molecular Function: cellulase activity (GO:0008810);|Biological Process: response to bacterium (GO:0009617);|Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);|Cellular Component: anchored component of plasma membrane (GO:0046658);|Cellular Component: apoplast (GO:0048046);" PF00332.17 Glycosyl hydrolases family 17 TRINITY_DN16488_c0_g1_i1 18.38180087 8.22674538 28.53685635 3.468790516 1.794432717 0.003537548 0.015733872 Up 1.207778 0.6933035 0.8218767 2.27909 2.935949 2.268067 PIN17259.1 hypothetical protein CDL12_10081 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111AG7 VQ motif -- PF05678.13 VQ motif TRINITY_DN16496_c0_g1_i2 470.329134 293.3672868 647.2909812 2.206418406 1.141706397 2.90E-19 9.06E-18 Up 13.15231 12.20686 11.45103 23.21646 19.32098 23.0413 PIN11616.1 Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [Handroanthus impetiginosus] Q9M5J8|PGIP2_ARATH Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana OX=3702 GN=PGIP2 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Molecular Function: polygalacturonase inhibitor activity (GO:0090353); "PF13855.5,PF12799.6,PF00560.32,PF08263.11,PF13516.5" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine rich repeat N-terminal domain|Leucine Rich repeat TRINITY_DN16497_c0_g1_i1 38.62599566 57.73200022 19.51999111 0.338113889 -1.564418815 0.000351624 0.002064582 Down 7.165138 4.004342 6.887222 1.668395 0.8208417 2.517043 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16512_c0_g1_i2 20.98934011 12.39940776 29.57927247 2.385539136 1.254315355 0.024169366 0.078992011 Up 1.680187 1.281919 1.162238 2.849348 3.035848 1.948327 XP_011102319.1 uncharacterized protein LOC105180362 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111D7M NA -- -- -- TRINITY_DN16513_c0_g1_i1 554.337154 296.7593047 811.9150032 2.735937813 1.452035439 1.82E-33 1.16E-31 Up 41.73127 38.33289 37.66348 84.15642 87.33109 88.55878 XP_011095952.1 cysteine proteinase inhibitor 5-like [Sesamum indicum] Q41916|CYT5_ARATH Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=CYS5 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YZDC Cysteine proteinase inhibitor Molecular Function: cysteine-type endopeptidase inhibitor activity (GO:0004869);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Biological Process: defense response (GO:0006952);|Biological Process: positive regulation of seed germination (GO:0010030);|Biological Process: cellular response to heat (GO:0034605); "PF16845.4,PF00031.20" Aspartic acid proteinase inhibitor|Cystatin domain TRINITY_DN16516_c0_g2_i1 22.38463752 33.90306596 10.86620908 0.320508154 -1.641567035 0.015825999 0.055805919 Down 4.737712 10.71767 5.161797 1.085871 1.597843 2.709057 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16518_c0_g1_i3 355.6506268 704.9231859 6.378067586 0.00904789 -6.788202863 4.97E-179 3.01E-176 Down 24.12713 25.69043 25.47601 0.1811684 0.08966087 0.266185 PIN03182.1 Cytochrome P450 CYP4/CYP19/CYP26 subfamily [Handroanthus impetiginosus] H2DH21|C7A29_PANGI Cytochrome P450 CYP72A219 OS=Panax ginseng OX=4054 PE=2 SV=1 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN16522_c0_g1_i1 154.7802292 72.56359874 236.9968597 3.26605714 1.707550031 1.94E-15 4.63E-14 Up 2.441009 2.424474 2.410921 6.531423 5.833547 6.863086 PIM97952.1 U2-associated snRNP A' protein [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG0531 "Protein phosphatase 1, regulatory subunit, and related proteins" [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat -- "PF12799.6,PF13855.5,PF14580.5" Leucine Rich repeats (2 copies)|Leucine rich repeat|Leucine-rich repeat TRINITY_DN16531_c0_g1_i6 29.32926367 19.48129312 39.17723423 2.01101816 1.00792611 0.031980148 0.09936853 Up 1.496823 1.829431 1.237651 2.660453 1.880967 2.999476 XP_011080538.1 transcription factor IBH1-like [Sesamum indicum] Q01I07|IBH1_ORYSI Transcription factor IBH1 OS=Oryza sativa subsp. indica OX=39946 GN=IBH1 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YYI2 Transcription factor Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);|Biological Process: regulation of growth (GO:0040008); -- -- TRINITY_DN16534_c0_g2_i1 56.30295821 106.0093896 6.596526839 0.062225873 -4.006341618 9.60E-21 3.30E-19 Down 7.792748 8.531782 6.860292 0.6314006 0.4724976 0.08623453 XP_012838886.1 PREDICTED: blue copper protein-like [Erythranthe guttata] Q41001|BCP_PEA Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YQ18 Plastocyanin-like domain-containing protein Molecular Function: electron transfer activity (GO:0009055);|Molecular Function: metal ion binding (GO:0046872); PF02298.16 Plastocyanin-like domain TRINITY_DN1653_c0_g1_i1 20.68460103 40.64473159 0.724470471 0.017824462 -5.809997663 2.69E-11 4.57E-10 Down 3.509352 3.182719 2.252419 0 0.09812273 0 ABM83371.1 ribosomal protein S2 [synthetic construct] Q9SCM3|RS24_ARATH 40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1 ppp:PHYPADRAFT_114488 K02981 "RP-S2e, RPS2" small subunit ribosomal protein S2e ko03010 Ribosome KOG0877 40S ribosomal protein S2/30S ribosomal protein S5 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0098 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body (By similarity) Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); "PF00333.19,PF03719.14" "Ribosomal protein S5, N-terminal domain|Ribosomal protein S5, C-terminal domain" TRINITY_DN16546_c0_g1_i1 32.23300942 20.83474413 43.63127472 2.094159374 1.066371241 0.018113591 0.062398894 Up 1.829723 0.5271298 1.113272 1.749935 1.747772 2.357351 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16548_c0_g1_i1 7.059375507 1.608335534 12.51041548 7.778486026 2.959489382 0.014420833 0.051698379 Up 0 0.3477265 0.5568726 3.052896 1.715772 0.7212784 XP_011099128.1 mitogen-activated protein kinase kinase kinase 2 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG0198 MEKK and related serine/threonine protein kinases [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms -- -- -- -- -- -- TRINITY_DN16548_c0_g4_i1 12.03229892 3.667062399 20.39753544 5.562363883 2.475698127 0.001672179 0.008230752 Up 0.6046457 0.7740069 0.1574975 2.882165 2.039651 1.988352 PIN25225.1 Serine/threonine protein kinase/TGF-beta stimulated factor [Handroanthus impetiginosus] O80888|M3K17_ARATH Mitogen-activated protein kinase kinase kinase 17 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK17 PE=1 SV=1 -- -- -- -- -- -- KOG0198 MEKK and related serine/threonine protein kinases [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XQGS mitogen-activated protein kinase kinase kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: MAP kinase kinase kinase activity (GO:0004709);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: signal transduction by protein phosphorylation (GO:0023014);|Biological Process: stress-activated protein kinase signaling cascade (GO:0031098);|Biological Process: activation of protein kinase activity (GO:0032147); "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN16557_c0_g1_i1 337.5763099 224.0459675 451.1066523 2.013455798 1.009673801 1.30E-11 2.28E-10 Up 25.3014 27.95388 32.8477 42.6909 50.74799 46.46333 XP_022853021.1 uncharacterized protein LOC111374569 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YWAU NA -- -- -- TRINITY_DN16567_c1_g4_i1 15.6274723 25.0969456 6.157999004 0.245368464 -2.026978254 0.006392803 0.026114877 Down 3.419029 5.804849 4.695199 4.35E-55 2.716122 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1656_c0_g1_i1 3.347020187 6.331805139 0.362235236 0.057208841 -4.127618065 0.044371504 0.128807039 Down 1.006545 0.9884303 0.45511 0 0.1695801 0 PIN12989.1 serine/threonine and tyrosine kinase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- T ENOG410XRRQ ttk protein kinase -- -- -- TRINITY_DN16576_c0_g4_i1 26.85069696 16.31830671 37.3830872 2.290868033 1.195894354 0.035476599 0.107942172 Up 2.225169 0.1120156 1.636315 3.090255 2.323639 1.816669 XP_011074732.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Sesamum indicum] Q8LDK3|NDUB2_ARATH NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At1g76200 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZNIE NA Cellular Component: mitochondrial respiratory chain complex I (GO:0005747);|Biological Process: oxidation-reduction process (GO:0055114); -- -- TRINITY_DN16577_c0_g2_i1 21.97533959 12.32715673 31.62352244 2.565354131 1.359157994 0.016157494 0.056763188 Up 2.263353 2.181914 2.679606 5.594931 3.993026 5.139029 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16588_c0_g2_i1 15.0432372 25.63734855 4.449125853 0.173540795 -2.52665325 0.000603847 0.003336599 Down 2.776746 1.997677 2.271643 0.4534527 0.2283257 0.2234096 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16588_c0_g3_i1 15.86775853 28.44375624 3.291760813 0.115728766 -3.111180583 3.76E-05 0.000273074 Down 1.994016 3.105248 4.567789 0.5707527 0.2792609 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16589_c0_g1_i1 127.9996791 77.24806149 178.7512968 2.313990712 1.210383074 1.21E-07 1.32E-06 Up 1.910905 1.731659 1.678651 3.027353 3.805984 3.113083 XP_012841431.1 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Erythranthe guttata] Q6JN46|EIX2_SOLLC Receptor-like protein EIX2 OS=Solanum lycopersicum OX=4081 GN=EIX2 PE=1 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF13855.5,PF12799.6,PF00560.32,PF08263.11,PF13516.5" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine rich repeat N-terminal domain|Leucine Rich repeat TRINITY_DN16595_c0_g1_i1 83.39067832 16.92472547 149.8566312 8.854302035 3.146378587 1.44E-23 5.82E-22 Up 2.239088 1.347015 1.268152 11.28724 11.4895 12.38928 XP_011078493.1 dirigent protein 22-like [Sesamum indicum] Q9FIG6|DIR1_ARATH Dirigent protein 1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: apoplast (GO:0048046); PF03018.13 Dirigent-like protein TRINITY_DN16605_c0_g1_i1 23.88949168 41.15117215 6.627811215 0.161060083 -2.63432911 0.00319284 0.014411116 Down 9.673363 8.734484 2.762573 1.109042 1.120221 0.5636311 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16609_c0_g1_i9 34.98464767 50.14999706 19.81929827 0.395200388 -1.339343733 0.004592811 0.019718287 Down 5.519503 3.143282 3.075146 1.020939 1.000401 1.677172 RLN08462.1 cingulin-like [Panicum miliaceum] Q9FXI7|H3L2_ARATH Histone H3-like 2 OS=Arabidopsis thaliana OX=3702 GN=MGH3 PE=2 SV=3 -- -- -- -- -- -- KOG1745 Histones H3 and H4 [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics B COG2036 "Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling" Cellular Component: nucleosome (GO:0000786);|Cellular Component: nucleus (GO:0005634);|Biological Process: nucleosome assembly (GO:0006334);|Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);|Molecular Function: nucleosomal DNA binding (GO:0031492);|Molecular Function: protein heterodimerization activity (GO:0046982);|Biological Process: pollen sperm cell differentiation (GO:0048235);|Cellular Component: generative cell nucleus (GO:0048555); -- -- TRINITY_DN16609_c0_g2_i1 16.87038127 9.006952158 24.73381037 2.74607991 1.457373608 0.021475733 0.071716909 Up 0.6201476 4.187936 0.9626509 3.928151 5.705964 2.898582 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16613_c0_g1_i1 566.2587733 1132.517547 0 0 #NAME? 1.61248894531201e-308 1.59E-305 Down 241.5465 253.6881 222.5518 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16613_c0_g2_i1 304.7673353 609.5346707 0 0 #NAME? 4.65E-178 2.74E-175 Down 6.095985 5.588184 6.092166 0 0 0 BAN84686.1 Large protein [Rabies viral vector pHEP5.0-CVSG-mRFP] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF00946.18,PF14318.5" Mononegavirales RNA dependent RNA polymerase|Mononegavirales mRNA-capping region V TRINITY_DN16614_c0_g1_i5 26.49133448 50.41292129 2.569747657 0.050973988 -4.294094954 2.28E-11 3.90E-10 Down 4.679159 3.859681 5.314233 0.193869 0.2873292 0.09834092 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16620_c2_g4_i1 7.172668388 13.61031841 0.735018369 0.054004495 -4.210776704 0.00167834 0.00825584 Down 2.726053 0.8198936 1.44607 0.2231739 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16620_c2_g6_i1 12.61580611 21.16300077 4.068611455 0.19225116 -2.378935789 0.002923639 0.013366176 Down 2.315539 3.608357 2.857321 0.8599529 0.2835805 0.2817126 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16620_c2_g8_i1 15.64952443 31.29904886 0 0 #NAME? 2.02E-08 2.46E-07 Down 4.460823 4.522917 1.72927 2.56E-22 1.01E-42 3.64E-22 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16622_c0_g1_i2 72.89733237 140.944288 4.850376729 0.034413432 -4.860884396 1.33E-22 5.06E-21 Down 14.39666 10.62801 9.380195 0 0.4620362 0.4508267 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16622_c0_g3_i1 65.25655932 109.0390661 21.47405257 0.196939073 -2.344178724 6.93E-12 1.24E-10 Down 15.79138 13.13131 17.42867 3.685834 1.837953 1.804702 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16622_c0_g4_i1 15.94894949 31.17342851 0.724470471 0.02324 -5.427246136 1.08E-08 1.35E-07 Down 2.911702 2.977265 3.677369 0 0.173759 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16622_c0_g5_i1 93.47418162 169.8506792 17.09768405 0.10066303 -3.312394163 1.57E-26 7.44E-25 Down 36.70105 32.10043 35.23916 1.904509 3.305407 3.046521 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16622_c0_g6_i1 8.456722892 16.91344578 0 0 #NAME? 5.41E-06 4.59E-05 Down 1.381799 2.640895 3.860044 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16622_c1_g2_i1 24.92220343 46.03362961 3.810777245 0.082782463 -3.594531015 5.25E-09 6.88E-08 Down 2.703527 3.765921 2.867207 0 0.1278296 0.5085216 KGN59589.1 hypothetical protein Csa_3G827310 [Cucumis sativus] Q8GWK2|AP2L4_ARATH AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana OX=3702 GN=At2g41710 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- K ENOG410Y9PK Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873); -- -- TRINITY_DN16626_c0_g1_i1 52.97775311 105.5697179 0.385788347 0.003654347 -8.096170784 3.36E-32 2.03E-30 Down 13.49223 13.48963 17.56483 3.58E-85 9.40E-81 0.1963319 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16626_c0_g2_i13 100.7280622 200.2987594 1.15736504 0.005778194 -7.435165704 1.62E-57 2.17E-55 Down 7.380711 8.328822 6.916903 0 0 0.108253 XP_012828374.1 "PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like [Erythranthe guttata]" Q0WM29|MMSA_ARATH "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALDH6B2 PE=1 SV=2" sind:105169296 K00140 "mmsA, iolA, ALDH6A1" malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase ko00562|ko00640|ko00410|ko00280 "Inositol phosphate metabolism|Propanoate metabolism|beta-Alanine metabolism|Valine, leucine and isoleucine degradation" KOG2449 Methylmalonate semialdehyde dehydrogenase [EG] METABOLISM|METABOLISM Amino acid transport and metabolism |Carbohydrate transport and metabolism I ENOG410XNP1 Dehydrogenase Molecular Function: methylmalonate-semialdehyde dehydrogenase (acylating) activity (GO:0004491);|Molecular Function: copper ion binding (GO:0005507);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: thymine catabolic process (GO:0006210);|Biological Process: valine metabolic process (GO:0006573);|Biological Process: valine catabolic process (GO:0006574);|Biological Process: response to oxidative stress (GO:0006979);|Molecular Function: malonate-semialdehyde dehydrogenase (acetylating) activity (GO:0018478); -- -- TRINITY_DN16627_c1_g1_i5 38.97984465 69.53616444 8.423524863 0.121138762 -3.045267524 2.19E-06 1.99E-05 Down 4.120312 7.390052 4.038581 0.8377199 0.5523944 0.1005258 XP_021278866.1 "ATP-dependent zinc metalloprotease FTSH 10, mitochondrial-like [Herrania umbratica]" Q8S2A7|FTSH3_ORYSJ "ATP-dependent zinc metalloprotease FTSH 3, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=FTSH3 PE=2 SV=1" nnu:104597164 K08956 AFG3 AFG3 family protein -- -- KOG0731 AAA+-type ATPase containing the peptidase M41 domain [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0465 "Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)" Molecular Function: metalloendopeptidase activity (GO:0004222);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Biological Process: mitochondrial fusion (GO:0008053);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: mitochondrial protein processing (GO:0034982);|Biological Process: cristae formation (GO:0042407); PF00004.28 ATPase family associated with various cellular activities (AAA) TRINITY_DN16629_c0_g4_i1 13.252854 21.63423548 4.871472524 0.22517424 -2.150886305 0.004955015 0.021038537 Down 1.297365 1.883211 1.346055 0.2413914 0.1605418 0.4140504 PON52857.1 "Phenazine biosynthesis protein, partial [Trema orientale]" Q9FWX7|AB11B_ARATH ABC transporter B family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCB11 PE=2 SV=1 -- -- -- -- -- -- KOG0055 "Multidrug/pheromone exporter, ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1132 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: auxin efflux transmembrane transporter activity (GO:0010329);|Biological Process: basipetal auxin transport (GO:0010540);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);" -- -- TRINITY_DN16640_c0_g1_i2 33.41220948 50.70993028 16.11448867 0.317777772 -1.65390988 0.000336357 0.001985728 Down 4.025986 4.460738 5.06671 1.540165 1.649666 0.2588697 PIN01904.1 hypothetical protein CDL12_25589 [Handroanthus impetiginosus] Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana OX=3702 GN=At5g01750 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111GT4 Pfam:DUF567 Cellular Component: chloroplast (GO:0009507);|Molecular Function: protein domain specific binding (GO:0019904); PF04525.11 LURP-one-related TRINITY_DN16647_c0_g2_i2 82.5402851 123.4708403 41.60972987 0.337000459 -1.569177538 4.21E-08 4.89E-07 Down 5.057879 5.344514 6.544476 1.545425 0.8854891 2.214761 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16647_c0_g3_i1 10.95407944 21.90815889 0 0 #NAME? 0.000520641 0.002927469 Down 5.0688 6.100427 0.5957472 3.66E-39 1.31E-65 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16647_c0_g6_i1 10.63775941 20.11815377 1.15736504 0.057528392 -4.11958204 0.000114181 0.000747158 Down 1.180054 1.460308 2.886225 0.001522872 1.76E-06 0.3021979 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16647_c0_g7_i1 7.892253519 15.78450704 0 0 #NAME? 2.62E-05 0.000195522 Down 3.067626 4.653929 1.412081 3.26E-53 1.49E-48 7.58E-43 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16666_c0_g4_i1 61.65928519 9.384689584 113.9338808 12.14039951 3.601743992 1.13E-20 3.86E-19 Up 0.2745558 0.2722463 0.5563124 2.860618 4.265182 3.551099 XP_020554265.1 berberine bridge enzyme-like 18 [Sesamum indicum] Q9SA85|BBE8_ARATH Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana OX=3702 GN=At1g30700 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: FAD binding (GO:0071949); "PF01565.22,PF08031.11" FAD binding domain|Berberine and berberine like TRINITY_DN16669_c1_g2_i1 11.44528042 17.28934389 5.601216944 0.323969318 -1.626070909 0.047623153 0.136250962 Down 1.224736 0.8900603 0.6786713 0.2294396 0.170833 0.3117696 PIN24544.1 Multicopper oxidase [Handroanthus impetiginosus] Q9ZPY2|LAC6_ARATH Laccase-6 OS=Arabidopsis thaliana OX=3702 GN=LAC6 PE=2 SV=1 sind:105173860 K05909 E1.10.3.2 laccase -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase "Molecular Function: copper ion binding (GO:0005507);|Molecular Function: oxidoreductase activity, oxidizing metal ions (GO:0016722);|Biological Process: lignin catabolic process (GO:0046274);|Cellular Component: apoplast (GO:0048046);|Molecular Function: hydroquinone:oxygen oxidoreductase activity (GO:0052716);" "PF00394.21,PF07731.13" Multicopper oxidase|Multicopper oxidase TRINITY_DN16674_c0_g1_i5 100.8455579 137.1116882 64.57942758 0.470998705 -1.086205002 3.16E-05 0.000232983 Down 9.190457 10.82718 10.26138 4.45835 4.577068 2.451376 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16676_c0_g1_i2 28.23426091 17.37003751 39.09848432 2.250915365 1.170511812 0.017005474 0.059129031 Up 0.9662818 1.039166 1.014153 1.647509 1.811395 2.08718 PIM99095.1 hypothetical protein CDL12_28414 [Handroanthus impetiginosus] Q9FH54|EF114_ARATH Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 GN=ERF114 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YY7D Transcription factor Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: defense response to fungus (GO:0050832); PF00847.19 AP2 domain TRINITY_DN16689_c0_g1_i3 109.8629835 147.7061673 72.01979977 0.487588305 -1.036264572 3.01E-05 0.000222766 Down 6.250971 6.335987 6.411571 3.080084 2.117055 2.291318 XP_020554374.1 uncharacterized protein LOC105176273 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111DV0 NA -- -- -- TRINITY_DN1668_c0_g1_i1 20.74732183 35.60185082 5.892792846 0.165519284 -2.594928788 4.17E-05 0.000299724 Down 6.730361 5.766111 4.240998 0.6974665 1.041466 0.4040687 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16696_c0_g1_i1 410.4592331 820.550957 0.367509184 0.000447881 -11.12459691 2.18E-138 8.59E-136 Down 36.97178 45.76575 45.05204 0.0504374 2.90E-26 2.02E-17 XP_022886373.1 "arginase 1, mitochondrial [Olea europaea var. sylvestris]" B8AU84|ARGI1_ORYSI "Arginase 1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=B0616E02-H0507E05.7 PE=1 SV=1" sind:105171167 K01476 "E3.5.3.1, rocF, arg" arginase ko00330|ko00220 Arginine and proline metabolism|Arginine biosynthesis KOG2964 Arginase family protein [E] METABOLISM Amino acid transport and metabolism E COG0010 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines" "Biological Process: urea cycle (GO:0000050);|Molecular Function: arginase activity (GO:0004053);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: arginine catabolic process (GO:0006527);|Molecular Function: agmatinase activity (GO:0008783);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: manganese ion binding (GO:0030145);|Biological Process: putrescine biosynthetic process from arginine, using agmatinase (GO:0033389);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: cobalt ion binding (GO:0050897);" PF00491.20 Arginase family TRINITY_DN16700_c0_g1_i4 4519.405005 6102.294657 2936.515352 0.481214939 -1.055246664 1.04E-59 1.46E-57 Down 606.2322 648.0542 638.6787 236.5897 245.5012 253.2047 PIN21380.1 hypothetical protein CDL12_05925 [Handroanthus impetiginosus] Q9M5X7|NLTP_MALDO Non-specific lipid-transfer protein OS=Malus domestica OX=3750 GN=MALD3 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG410YT63 Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity) Biological Process: lipid transport (GO:0006869);|Molecular Function: lipid binding (GO:0008289); PF00234.21 Protease inhibitor/seed storage/LTP family TRINITY_DN16703_c0_g1_i1 325.1591373 455.3079519 195.0103228 0.428304232 -1.223292162 7.03E-16 1.74E-14 Down 33.07212 30.74197 29.88094 10.44956 10.07838 11.84004 XP_011072408.1 dehydration-responsive element-binding protein 3 [Sesamum indicum] Q9LYD3|DREB3_ARATH Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);" PF00847.19 AP2 domain TRINITY_DN16705_c0_g1_i6 37.93175043 71.78715814 4.07634272 0.056783732 -4.13837853 3.20E-15 7.54E-14 Down 8.368729 11.5729 12.12067 0.4617933 0.4680968 0.4889119 XP_011025348.1 PREDICTED: probably inactive receptor-like protein kinase At2g46850 [Populus euphratica] Q8S8N4|Y2685_ARATH Probably inactive receptor-like protein kinase At2g46850 OS=Arabidopsis thaliana OX=3702 GN=At2g46850 PE=3 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms -- -- -- -- -- -- TRINITY_DN16716_c0_g1_i1 32.63812605 60.34994209 4.926310011 0.081629076 -3.614773062 1.48E-11 2.58E-10 Down 6.304997 8.433232 8.365263 0.1484808 0.2936754 1.126405 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16718_c0_g1_i2 70.92888767 141.0861987 0.771576693 0.005468832 -7.514551587 1.85E-41 1.55E-39 Down 7.802667 8.914238 8.658056 0 0 0.1219146 EPS70458.1 "hypothetical protein M569_04297, partial [Genlisea aurea]" -- -- -- -- -- -- -- -- -- -- -- -- -- S COG1235 domain protein -- -- -- TRINITY_DN16729_c0_g2_i1 10.28839099 4.748954574 15.8278274 3.332907728 1.736781377 0.02788678 0.088870023 Up 0.7365326 1.313987 2.04E-22 1.585547 2.897559 1.172679 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16730_c0_g1_i2 18.79235994 11.51566747 26.0690524 2.26378996 1.178740108 0.047150962 0.135206799 Up 1.366276 0.9568795 0.8697726 1.522775 1.999683 2.25502 PIM99288.1 hypothetical protein CDL12_28222 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111A3K Late embryogenesis abundant protein -- -- -- TRINITY_DN16734_c0_g1_i1 212.4753471 74.00434664 350.9463476 4.742239659 2.245568574 8.83E-29 4.73E-27 Up 5.517096 4.965178 4.586405 21.05462 19.99639 16.53044 XP_006475366.1 inositol oxygenase 2-like [Citrus sinensis] Q8H1S0|MIOX4_ARATH Inositol oxygenase 4 OS=Arabidopsis thaliana OX=3702 GN=MIOX4 PE=2 SV=1 cic:CICLE_v10008962mg K00469 MIOX inositol oxygenase ko00562|ko00053 Inositol phosphate metabolism|Ascorbate and aldarate metabolism KOG1573 Aldehyde reductase [R] POORLY CHARACTERIZED General function prediction only S ENOG410XQ4J inositol oxygenase Molecular Function: iron ion binding (GO:0005506);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: inositol catabolic process (GO:0019310);|Biological Process: L-ascorbic acid biosynthetic process (GO:0019853);|Molecular Function: inositol oxygenase activity (GO:0050113); PF05153.14 Myo-inositol oxygenase TRINITY_DN16734_c0_g2_i1 31.05285961 16.02282171 46.0828975 2.876078779 1.524103193 0.001127102 0.005802224 Up 2.708133 1.197158 1.922568 3.131191 5.472336 5.000823 EFH42418.1 hypothetical protein ARALYDRAFT_495755 [Arabidopsis lyrata subsp. lyrata] Q9FJU4|MIOX5_ARATH Inositol oxygenase 5 OS=Arabidopsis thaliana OX=3702 GN=MIOX5 PE=2 SV=1 aly:ARALYDRAFT_495755 K00469 MIOX inositol oxygenase ko00562|ko00053 Inositol phosphate metabolism|Ascorbate and aldarate metabolism KOG1573 Aldehyde reductase [R] POORLY CHARACTERIZED General function prediction only S ENOG410XQ4J inositol oxygenase Molecular Function: iron ion binding (GO:0005506);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: inositol catabolic process (GO:0019310);|Biological Process: L-ascorbic acid biosynthetic process (GO:0019853);|Molecular Function: inositol oxygenase activity (GO:0050113); -- -- TRINITY_DN16741_c0_g2_i6 43.30381852 59.50144248 27.10619457 0.455555251 -1.134302056 0.004368 0.018887087 Down 4.451663 3.161341 3.61478 1.279445 1.487647 1.369376 XP_020554606.1 uncharacterized protein LOC105177934 isoform X1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XWWT NA -- PF13398.5 Peptidase M50B-like TRINITY_DN16745_c0_g1_i6 201.3104861 268.8797204 133.7412518 0.497401781 -1.007516422 6.48E-08 7.34E-07 Down 24.78976 23.58805 24.22487 10.14835 9.333353 9.63971 XP_011073740.1 "histone-lysine N-methyltransferase, H3 lysine-79 specific-like isoform X1 [Sesamum indicum]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YTP7 NA -- -- -- TRINITY_DN1674_c0_g1_i1 6.606498879 12.05563272 1.15736504 0.096002016 -3.380791494 0.005560729 0.0232002 Down 3.04983 1.607667 2.825103 0 0 0.5982649 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16758_c0_g1_i1 488.7156955 306.1688496 671.2625415 2.192458647 1.132549631 3.73E-19 1.16E-17 Up 17.95377 22.20711 21.99665 34.50344 40.20229 35.26005 PIN09500.1 Allene-oxide cyclase [Handroanthus impetiginosus] A2XID3|AOC_ORYSI "Allene oxide cyclase, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=AOC PE=2 SV=1" pxb:103947146 K10525 AOC allene oxide cyclase ko00592 alpha-Linolenic acid metabolism -- -- -- -- -- S ENOG4111X07 allene oxide cyclase "Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);|Biological Process: circadian rhythm (GO:0007623);|Cellular Component: chloroplast (GO:0009507);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to insect (GO:0009625);|Biological Process: response to blue light (GO:0009637);|Biological Process: response to absence of light (GO:0009646);|Biological Process: response to salt stress (GO:0009651);|Biological Process: jasmonic acid biosynthetic process (GO:0009695);|Biological Process: response to ethylene (GO:0009723);|Biological Process: auxin-activated signaling pathway (GO:0009734);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);|Biological Process: flower development (GO:0009908);|Biological Process: response to metal ion (GO:0010038);|Biological Process: response to red light (GO:0010114);|Biological Process: response to far red light (GO:0010218);|Biological Process: response to vitamin B2 (GO:0033274);|Biological Process: response to hydrogen peroxide (GO:0042542);|Molecular Function: allene-oxide cyclase activity (GO:0046423);|Biological Process: photoperiodism, flowering (GO:0048573);|Biological Process: defense response to fungus (GO:0050832);|Biological Process: developmental vegetative growth (GO:0080186);|Biological Process: positive regulation of defense response to insect (GO:1900367);" PF06351.10 Allene oxide cyclase TRINITY_DN1675_c0_g1_i1 15.6163892 8.690658597 22.5421198 2.593833315 1.375085772 0.027859842 0.088796645 Up 1.968036 0.975969 0.3840612 2.467518 2.843705 1.712888 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16768_c0_g1_i2 17.13443335 3.41482296 30.85404375 9.035327486 3.175576893 7.56E-06 6.25E-05 Up 0 0.470349 0.2464451 1.293047 2.179858 2.020334 XP_011098653.1 AT-hook motif nuclear-localized protein 28-like [Sesamum indicum] Q9LTA2|AHL17_ARATH AT-hook motif nuclear-localized protein 17 OS=Arabidopsis thaliana OX=3702 GN=AHL17 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGVK Domain of unknown function (DUF296) Molecular Function: AT DNA binding (GO:0003680);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634); PF03479.14 Domain of unknown function (DUF296) TRINITY_DN16769_c0_g1_i1 1535.741425 1020.511544 2050.971307 2.009748267 1.007014807 9.18E-34 5.96E-32 Up 81.71579 74.48818 78.93857 125.5196 127.081 128.8571 XP_007052073.1 PREDICTED: 40S ribosomal protein S13 [Theobroma cacao] P62302|RS13_SOYBN 40S ribosomal protein S13 OS=Glycine max OX=3847 GN=RPS13 PE=2 SV=1 sind:105171244 K02953 "RP-S13e, RPS13" small subunit ribosomal protein S13e ko03010 Ribosome KOG0400 40S ribosomal protein S13 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0184 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Molecular Function: small ribosomal subunit rRNA binding (GO:0070181); "PF08069.11,PF00312.21" Ribosomal S13/S15 N-terminal domain|Ribosomal protein S15 TRINITY_DN16771_c0_g1_i2 196.8029498 78.38207952 315.22382 4.021631244 2.007780803 6.66E-25 2.90E-23 Up 5.278041 4.007403 4.989966 16.03228 16.24873 14.09602 XP_011075652.1 uncharacterized protein LOC105160086 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKVG NA -- -- -- TRINITY_DN16775_c0_g1_i2 265.188926 160.47219 369.9056621 2.305107583 1.204834085 1.59E-13 3.28E-12 Up 15.71037 13.34692 13.79628 26.92856 27.88777 24.90974 PIN11422.1 hypothetical protein CDL12_15961 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41120KF NA -- -- -- TRINITY_DN16776_c0_g1_i2 27.20432794 36.77331691 17.63533896 0.479568895 -1.060190006 0.033029703 0.101938897 Down 3.709509 3.307822 3.162953 1.028828 0.8967495 2.008453 XP_011079222.1 uncharacterized protein LOC105162802 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41119S6 NA -- -- -- TRINITY_DN16780_c0_g1_i1 79.29434587 117.7676104 40.82108132 0.346624009 -1.528556506 2.75E-07 2.86E-06 Down 5.476699 4.194707 4.961269 1.530121 1.29008 1.266556 XP_011079130.1 UDP-glycosyltransferase 74E1-like [Sesamum indicum] O22822|U74F2_ARATH UDP-glycosyltransferase 74F2 OS=Arabidopsis thaliana OX=3702 GN=UGT74F2 PE=1 SV=1 sind:105162724 K13691 SGT1 pathogen-inducible salicylic acid glucosyltransferase -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Cellular Component: cytosol (GO:0005829);|Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Biological Process: salicylic acid metabolic process (GO:0009696);|Biological Process: positive regulation of seed germination (GO:0010030);|Biological Process: benzoate metabolic process (GO:0018874);|Molecular Function: UDP-glucosyltransferase activity (GO:0035251);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);|Molecular Function: salicylic acid glucosyltransferase (ester-forming) activity (GO:0052639);|Molecular Function: salicylic acid glucosyltransferase (glucoside-forming) activity (GO:0052640);|Molecular Function: benzoic acid glucosyltransferase activity (GO:0052641);|Molecular Function: UDP-glucose:4-aminobenzoate acylglucosyltransferase activity (GO:0080002);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);|Molecular Function: nicotinate-O-glucosyltransferase activity (GO:0090704); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN16783_c0_g1_i1 98.10888296 132.5837254 63.63404054 0.479953632 -1.05903306 5.89E-05 0.000410336 Down 5.911186 5.585165 5.932375 2.681322 2.348756 1.685442 XP_011093642.1 LOW QUALITY PROTEIN: protein IQ-DOMAIN 14 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YC0Z "IQ calmodulin-binding motif family protein, expressed" -- "PF13178.5,PF00612.26" Protein of unknown function (DUF4005)|IQ calmodulin-binding motif TRINITY_DN16784_c0_g1_i1 131.2768685 61.0024435 201.5512935 3.303987217 1.724208105 4.42E-14 9.48E-13 Up 3.969921 3.78435 2.454366 8.274757 9.224482 9.72557 PIN13063.1 hypothetical protein CDL12_14309 [Handroanthus impetiginosus] E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea OX=4146 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y0DY Isoflavone reductase Cellular Component: cytoplasm (GO:0005737);|Molecular Function: oxidoreductase activity (GO:0016491); "PF05368.12,PF13460.5,PF01370.20,PF01073.18,PF03435.17" NmrA-like family|NAD(P)H-binding|NAD dependent epimerase/dehydratase family|3-beta hydroxysteroid dehydrogenase/isomerase family|Saccharopine dehydrogenase NADP binding domain TRINITY_DN16785_c0_g1_i5 51.84626389 32.10437256 71.58815522 2.229856855 1.1569511 0.00155026 0.00769215 Up 2.179721 0.8916412 1.299217 2.984776 1.90658 3.034105 XP_012853318.1 PREDICTED: probable methyltransferase PMT24 [Erythranthe guttata] Q9SD39|PMTR_ARATH Probable methyltransferase PMT27 OS=Arabidopsis thaliana OX=3702 GN=At3g51070 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y2C5 Methyltransferase Cellular Component: endosome (GO:0005768);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: trans-Golgi network (GO:0005802);|Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: cell wall pectin metabolic process (GO:0052546); PF03141.15 Putative S-adenosyl-L-methionine-dependent methyltransferase TRINITY_DN16800_c0_g1_i1 22.28215697 44.56431395 0 0 #NAME? 1.16E-14 2.61E-13 Down 6.319523 6.245253 8.000828 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16800_c0_g2_i1 19.63929964 39.27859928 0 0 #NAME? 9.20E-05 0.000614356 Down 7.950158 12.97536 2.060368 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16800_c0_g4_i2 21.28123845 42.5624769 0 0 #NAME? 8.85E-14 1.86E-12 Down 2.999352 3.065036 1.62275 0 5.13E-60 4.07E-41 XP_011097977.1 protein NDR1 [Sesamum indicum] O48915|NDR1_ARATH Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG41113EN disease resistance "Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: defense response, incompatible interaction (GO:0009814);|Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);|Biological Process: defense response to fungus, incompatible interaction (GO:0009817);|Biological Process: positive regulation of cell death (GO:0010942);|Cellular Component: membrane (GO:0016020);|Biological Process: defense response to bacterium (GO:0042742);|Cellular Component: anchored component of plasma membrane (GO:0046658);" -- -- TRINITY_DN16803_c1_g5_i2 13.04007801 6.969506378 19.11064965 2.742037759 1.455248438 0.042568614 0.124705847 Up 1.705946 1.655333 0.6539717 2.979112 1.644931 4.09953 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16805_c0_g1_i3 134.4974913 210.3095552 58.68542743 0.279043087 -1.841440191 1.42E-10 2.22E-09 Down 17.13564 23.72935 16.59414 4.881601 3.909133 4.110593 XP_012827893.1 PREDICTED: receptor-like serine/threonine-protein kinase NCRK [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16805_c0_g2_i2 16.34848539 31.53960574 1.15736504 0.036695609 -4.768248749 3.34E-08 3.94E-07 Down 2.986398 2.476608 3.331965 3.40E-34 0 0.22423 PIN07658.1 Serine/threonine protein kinase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16807_c0_g4_i1 23.49745903 38.06292467 8.931993397 0.234663875 -2.09133233 0.000174838 0.00110106 Down 3.288505 5.987233 6.141132 0.60297 1.216101 1.164118 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16807_c0_g5_i1 25.61041961 48.56742701 2.653412205 0.054633576 -4.194068339 6.59E-11 1.07E-09 Down 6.028797 3.979259 6.628114 0 0.2451041 0.5206168 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16807_c0_g6_i1 83.46771122 153.7724031 13.16301931 0.085600661 -3.546234257 5.09E-19 1.56E-17 Down 18.09967 12.99443 12.76875 1.301724 0.1307301 1.519108 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16808_c0_g1_i9 1020.370328 1415.283419 625.4572374 0.441930732 -1.178107834 6.96E-35 4.66E-33 Down 70.21057 68.61103 70.97227 25.31001 24.85332 24.6634 XP_011080175.1 protein SULFUR DEFICIENCY-INDUCED 1 [Sesamum indicum] Q8GXU5|SDI1_ARATH Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis thaliana OX=3702 GN=SDI1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YFAS male sterility MS5 family protein Biological Process: regulation of sulfur utilization (GO:0006792);|Biological Process: cellular response to sulfur starvation (GO:0010438);|Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);|Cellular Component: nuclear transcriptional repressor complex (GO:0090568); -- -- TRINITY_DN16809_c0_g1_i1 176.2473858 244.9642075 107.5305641 0.438964391 -1.187824183 1.81E-09 2.50E-08 Down 9.603801 10.15035 10.45926 3.269548 2.940164 4.517037 XP_012852844.1 PREDICTED: protein TOO MANY MOUTHS-like [Erythranthe guttata] Q9SSD1|TMM_ARATH Protein TOO MANY MOUTHS OS=Arabidopsis thaliana OX=3702 GN=TMM PE=1 SV=1 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Biological Process: asymmetric cell division (GO:0008356);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: trichome morphogenesis (GO:0010090);|Biological Process: stomatal complex patterning (GO:0010375);|Biological Process: stomatal complex formation (GO:0010376);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: anchored component of membrane (GO:0031225);|Molecular Function: receptor serine/threonine kinase binding (GO:0033612);|Molecular Function: peptide binding (GO:0042277);|Biological Process: innate immune response (GO:0045087);|Biological Process: defense response to fungus (GO:0050832);|Biological Process: cellular response to abscisic acid stimulus (GO:0071215);|Biological Process: regulation of antifungal innate immune response (GO:1905034); "PF13855.5,PF12799.6" Leucine rich repeat|Leucine Rich repeats (2 copies) TRINITY_DN16813_c0_g1_i2 112.6037947 225.2075893 0 0 #NAME? 1.25E-69 2.09E-67 Down 25.36792 25.05277 25.47447 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16813_c0_g2_i1 46.98088088 93.96176175 0 0 #NAME? 1.73E-26 8.20E-25 Down 7.052512 11.59406 9.324642 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16813_c0_g3_i1 20.47052859 40.94105718 0 0 #NAME? 1.58E-07 1.70E-06 Down 7.014162 4.948313 2.222523 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16813_c0_g4_i1 34.24990303 68.11401771 0.385788347 0.005663861 -7.463998357 1.21E-13 2.52E-12 Down 8.495222 13.66592 7.184751 9.86E-107 0 0.2007772 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16813_c0_g5_i5 47.82924821 95.65849642 0 0 #NAME? 1.46E-10 2.28E-09 Down 15.86642 8.463263 6.748859 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16813_c0_g6_i2 19.39123773 38.78247545 0 0 #NAME? 4.38E-07 4.44E-06 Down 4.174504 3.710797 9.146057 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16813_c0_g8_i1 26.35406175 52.70812351 0 0 #NAME? 9.09E-16 2.22E-14 Down 7.580247 4.693607 4.557789 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16814_c0_g1_i2 19.91177472 11.90112927 27.92242017 2.346199216 1.230325518 0.036056223 0.109324703 Up 0.6381209 0.6198653 0.6256148 1.244668 0.9900808 1.287903 XP_011099410.2 protein PHLOEM PROTEIN 2-LIKE A10 [Sesamum indicum] Q9SY57|P2A10_ARATH Protein PHLOEM PROTEIN 2-LIKE A10 OS=Arabidopsis thaliana OX=3702 GN=PP2A10 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111YI2 Protein PHLOEM PROTEIN 2-LIKE Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: carbohydrate binding (GO:0030246); -- -- TRINITY_DN16819_c0_g1_i1 107.8817784 20.862909 194.9006478 9.341968935 3.223726648 3.89E-30 2.19E-28 Up 1.123898 0.3459275 1.021331 6.239535 5.811364 6.592018 XP_012850461.1 PREDICTED: lysine histidine transporter 1-like [Erythranthe guttata] Q9FKS8|LHT1_ARATH Lysine histidine transporter 1 OS=Arabidopsis thaliana OX=3702 GN=LHT1 PE=1 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Molecular Function: symporter activity (GO:0015293);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: amino acid import (GO:0043090);|Biological Process: response to karrikin (GO:0080167); PF01490.17 Transmembrane amino acid transporter protein TRINITY_DN16822_c1_g2_i1 12.74542857 6.891492665 18.59936448 2.698887655 1.432364924 0.048592049 0.138453952 Up 2.504645 0.6099268 0.985553 3.681753 2.196172 2.943103 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16827_c0_g1_i2 46.17887508 17.43144655 74.92630362 4.298341128 2.103779983 1.38E-07 1.49E-06 Up 1.896715 1.535253 2.212397 5.873727 5.8272 7.746636 XP_011074584.1 uncharacterized protein LOC105159273 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41117ZZ CONTAINS InterPro DOMAIN s Uncharacterised conserved protein UCP031279 (InterPro IPR016972) -- -- -- TRINITY_DN16828_c0_g1_i1 10.06083713 20.12167426 0 0 #NAME? 6.24E-07 6.18E-06 Down 1.690743 1.795524 2.032376 0 0 0 PNX92318.1 retrotransposon-related protein [Trifolium pratense] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN16828_c0_g2_i1 13.68945322 27.37890644 0 0 #NAME? 3.01E-09 4.05E-08 Down 1.471618 1.625917 2.007777 0 0 0 XP_021692914.1 uncharacterized protein LOC110673970 isoform X1 [Hevea brasiliensis] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN16828_c1_g2_i2 28.84569987 57.69139974 0 0 #NAME? 1.03E-18 3.09E-17 Down 1.697098 2.175929 2.060078 7.81E-34 9.01E-86 0 CAN83125.1 hypothetical protein VITISV_015109 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF14223.5,PF13976.5,PF14244.5" gag-polypeptide of LTR copia-type|GAG-pre-integrase domain|gag-polypeptide of LTR copia-type TRINITY_DN16828_c1_g3_i1 11.54057448 23.08114896 0 0 #NAME? 0.007053454 0.028439994 Down 2.678411 8.755891 1.028009 3.47E-60 1.17E-53 2.63E-23 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16828_c1_g4_i2 18.83851258 37.67702517 0 0 #NAME? 1.58E-07 1.69E-06 Down 1.631167 5.184731 5.102574 9.64E-19 5.46E-22 1.26E-54 XP_021808903.1 uncharacterized protein LOC110752531 [Prunus avium] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG41106RX NA -- "PF14244.5,PF14223.5" gag-polypeptide of LTR copia-type|gag-polypeptide of LTR copia-type TRINITY_DN16828_c1_g5_i1 5.826765711 11.65353142 0 0 #NAME? 0.000311154 0.001850899 Down 1.129141 3.186729 1.763994 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF14244.5 gag-polypeptide of LTR copia-type TRINITY_DN16828_c1_g7_i2 4.38201536 8.764030721 0 0 #NAME? 0.0027753 0.012793663 Down 1.138019 0.7645604 0.4562765 0 0 0 XP_021808903.1 uncharacterized protein LOC110752531 [Prunus avium] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN16829_c0_g1_i2 44.58284707 67.94210384 21.22359031 0.312377585 -1.67863716 2.18E-05 0.000165918 Down 5.703187 4.963945 6.062439 0.7770169 1.696752 1.719425 PIN02339.1 hypothetical protein CDL12_25149 [Handroanthus impetiginosus] Q9SA16|P2A09_ARATH Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YWN9 Protein PHLOEM PROTEIN 2-LIKE Molecular Function: carbohydrate binding (GO:0030246); PF14299.5 Phloem protein 2 TRINITY_DN1682_c0_g1_i1 11.21803315 4.207027644 18.22903866 4.332997119 2.115365277 0.011502041 0.042775041 Up 0.4990203 0.3177203 0.7604827 1.71057 1.966858 2.118071 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16832_c0_g1_i1 520.8062529 121.5056107 920.106895 7.572546563 2.920778544 4.96E-104 1.32E-101 Up 4.913414 5.988264 6.265242 35.35167 35.31672 34.09648 AJO53278.1 chalcone synthase-like protein [Pogostemon cablin] O04111|CHSY_PERFR Chalcone synthase OS=Perilla frutescens OX=48386 GN=CHS PE=2 SV=1 sind:105171854 K00660 CHS chalcone synthase ko04712|ko00941 Circadian rhythm - plant|Flavonoid biosynthesis -- -- -- -- -- Q COG3424 synthase Biological Process: flavonoid biosynthetic process (GO:0009813);|Molecular Function: naringenin-chalcone synthase activity (GO:0016210); "PF00195.18,PF02797.14,PF08545.9" "Chalcone and stilbene synthases, N-terminal domain|Chalcone and stilbene synthases, C-terminal domain|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III" TRINITY_DN16838_c0_g2_i1 11.85125174 4.81192242 18.89058107 3.925786706 1.972981791 0.010617847 0.039991364 Up 2.221468 0 0.8483842 2.159508 4.330531 2.950393 XP_011076673.2 transcription factor bHLH51 [Sesamum indicum] Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana OX=3702 GN=BHLH51 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410ZM5C transcription factor "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: protein dimerization activity (GO:0046983);" -- -- TRINITY_DN16845_c0_g1_i1 17.22359022 3.920422938 30.52675751 7.786598025 2.960993151 0.015943287 0.056140998 Up 0.171871 0.6620433 0.6166197 1.780296 5.576429 1.938097 XP_012855856.1 PREDICTED: uncharacterized protein LOC105975223 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111AKR NA -- -- -- TRINITY_DN16845_c0_g2_i2 41.53183517 24.34378259 58.71988775 2.41211026 1.270295856 0.003140752 0.014212756 Up 3.234581 1.798998 3.243538 7.275395 3.859966 5.069181 XP_011100112.1 uncharacterized protein LOC105178343 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111AKR NA -- -- -- TRINITY_DN16860_c0_g1_i1 43.45963096 28.87218309 58.04707882 2.010484577 1.007543269 0.009509053 0.036555256 Up 2.246905 2.152896 1.993773 3.567096 3.09203 3.699091 XP_011085544.1 probable calcium-binding protein CML41 [Sesamum indicum] Q8L3R2|CML41_ARATH Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2 sind:105167486 K13448 CML calcium-binding protein CML ko04626 Plant-pathogen interaction KOG0027 Calmodulin and related proteins (EF-Hand superfamily) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms DTZ COG5126 Calcium-binding protein Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: nucleus (GO:0005634);|Biological Process: calcium-mediated signaling (GO:0019722); "PF13833.5,PF00036.31,PF13499.5,PF13405.5,PF13202.5" EF-hand domain pair|EF hand|EF-hand domain pair|EF-hand domain|EF hand TRINITY_DN16861_c0_g1_i1 41.66790147 70.39249289 12.94331005 0.183873443 -2.443214968 1.65E-08 2.03E-07 Down 3.058868 2.675067 2.949354 0.6754154 0.3365908 0.2657901 XP_012852330.1 PREDICTED: O-acyltransferase WSD1-like [Erythranthe guttata] Q93ZR6|WSD1_ARATH O-acyltransferase WSD1 OS=Arabidopsis thaliana OX=3702 GN=WSD1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZYUM O-acyltransferase (WSD1-like) Molecular Function: diacylglycerol O-acyltransferase activity (GO:0004144);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: wax biosynthetic process (GO:0010025);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: triglyceride biosynthetic process (GO:0019432);|Molecular Function: long-chain-alcohol O-fatty-acyltransferase activity (GO:0047196);|Molecular Function: arachidoyl-CoA:1-dodecanol O-acyltransferase activity (GO:0102966);|Molecular Function: wax ester synthase activity (GO:0103095); "PF03007.15,PF00668.19,PF07247.11,PF06974.12" Wax ester synthase-like Acyl-CoA acyltransferase domain|Condensation domain|Alcohol acetyltransferase|Protein of unknown function (DUF1298) TRINITY_DN16864_c0_g1_i1 32.84747487 20.99033385 44.70461589 2.129771551 1.090698689 0.01705808 0.059284697 Up 0.6048433 1.179831 0.939702 1.111308 1.681556 1.871884 XP_012854221.1 PREDICTED: probable polygalacturonase [Erythranthe guttata] A7PZL3|PGLR_VITVI Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- M COG5434 Glycoside hydrolase family 28 Molecular Function: polygalacturonase activity (GO:0004650);|Biological Process: carbohydrate metabolic process (GO:0005975);|Cellular Component: integral component of membrane (GO:0016021); PF00295.16 Glycosyl hydrolases family 28 TRINITY_DN16865_c0_g1_i1 73.28259342 44.95257802 101.6126088 2.260440075 1.176603672 5.73E-05 0.000400181 Up 4.631522 5.970807 2.780888 7.313433 8.015098 9.171991 EYU31659.1 hypothetical protein MIMGU_mgv1a016107mg [Erythranthe guttata] Q9LSK9|Y5566_ARATH Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XWC4 hydroxyproline-rich glycoprotein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN16868_c0_g1_i13 45.61412438 67.08004751 24.14820125 0.359990819 -1.473967981 0.000178529 0.001121998 Down 3.665987 3.307311 2.963159 1.076055 0.8778029 0.9483542 EYU20573.1 hypothetical protein MIMGU_mgv1a000577mg [Erythranthe guttata] Q6L3Z4|R1B12_SOLDE Putative late blight resistance protein homolog R1B-12 OS=Solanum demissum OX=50514 GN=R1B-12 PE=3 SV=2 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Molecular Function: ADP binding (GO:0043531); -- -- TRINITY_DN16869_c0_g1_i3 59.62886502 100.1430565 19.11467358 0.190873679 -2.389309925 5.37E-11 8.82E-10 Down 9.749099 9.277204 7.683718 2.041406 1.57705 0.4737526 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16870_c0_g1_i1 474.8973529 300.9712196 648.8234861 2.15576588 1.108200507 3.57E-18 1.04E-16 Up 14.63211 15.82778 15.39588 25.53202 26.93692 27.31824 XP_011095600.1 "fructose-bisphosphate aldolase 5, cytosolic [Sesamum indicum]" O65581|ALFC5_ARATH "Fructose-bisphosphate aldolase 5, cytosolic OS=Arabidopsis thaliana OX=3702 GN=FBA5 PE=1 SV=1" sind:105175004 K01623 ALDO "fructose-bisphosphate aldolase, class I" ko00710|ko00030|ko00051|ko00010 Carbon fixation in photosynthetic organisms|Pentose phosphate pathway|Fructose and mannose metabolism|Glycolysis / Gluconeogenesis KOG1557 Fructose-biphosphate aldolase [G] METABOLISM Carbohydrate transport and metabolism G COG3588 fructose-bisphosphate aldolase Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332);|Cellular Component: cytosol (GO:0005829);|Biological Process: gluconeogenesis (GO:0006094);|Biological Process: glycolytic process (GO:0006096);|Cellular Component: chloroplast (GO:0009507); PF00274.18 Fructose-bisphosphate aldolase class-I TRINITY_DN16876_c0_g1_i1 262.9971884 163.7436668 362.25071 2.212303639 1.145549409 5.63E-11 9.22E-10 Up 16.80357 12.82385 16.78251 23.47571 30.55877 28.8146 KZV17157.1 wound-induced protein 1-like [Dorcoceras hygrometricum] P20144|WUN1_SOLTU Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YQYD wound-induced protein -- PF07107.10 Wound-induced protein WI12 TRINITY_DN1687_c0_g1_i1 15.04340119 28.63786144 1.448940942 0.050595291 -4.304853064 0.018717179 0.064168421 Down 7.505761 2.659385 1.235591 0 0.4666304 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16884_c0_g1_i2 178.6241773 274.0098105 83.23854418 0.30377943 -1.71890391 2.11E-17 5.80E-16 Down 8.856652 7.576647 9.612986 2.198494 2.489357 1.685973 XP_012846183.1 PREDICTED: protein NRT1/ PTR FAMILY 3.1-like [Erythranthe guttata] Q9SX20|PTR18_ARATH Protein NRT1/ PTR FAMILY 3.1 OS=Arabidopsis thaliana OX=3702 GN=NPF3.1 PE=2 SV=1 -- -- -- -- -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Biological Process: gibberellic acid homeostasis (GO:0010336);|Molecular Function: peptide:proton symporter activity (GO:0015333);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oligopeptide transmembrane transporter activity (GO:0035673);|Biological Process: nitrate assimilation (GO:0042128);|Cellular Component: intracellular vesicle (GO:0097708);|Molecular Function: peptide transmembrane transporter activity (GO:1904680); PF00854.20 POT family TRINITY_DN16895_c0_g1_i1 26.57134352 50.17660313 2.966083902 0.059112888 -4.080383493 9.82E-11 1.57E-09 Down 6.03098 4.461926 4.412263 0.3781383 0.1497146 0.1814881 PIN08489.1 hypothetical protein CDL12_18937 [Handroanthus impetiginosus] Q8LBQ7|ERF34_ARATH Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YIZG Transcription factor Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Molecular Function: transcription regulatory region DNA binding (GO:0044212); PF00847.19 AP2 domain TRINITY_DN16896_c0_g1_i5 148.3329803 83.74981882 212.9161419 2.542287791 1.346127355 2.35E-10 3.59E-09 Up 6.940757 9.363171 5.47787 13.88157 14.20964 16.58009 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16897_c0_g1_i6 24.09397502 15.10739606 33.08055397 2.18969264 1.130728378 0.036309268 0.109915746 Up 1.026477 0.2788729 0.9537566 1.756737 0.9892044 1.286846 XP_012845668.1 PREDICTED: F-box protein At3g22700-like [Erythranthe guttata] Q8GXC7|FBK50_ARATH F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZU51 Ubiquitin-protein ligase -- -- -- TRINITY_DN16900_c0_g1_i1 20.94408357 28.80881237 13.07935477 0.454005344 -1.139218816 0.041797592 0.12291514 Down 4.916459 4.132433 5.975306 2.675772 0.5493555 2.09573 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16907_c0_g1_i2 289.5675303 171.7784259 407.3566347 2.371407425 1.24574355 4.18E-15 9.76E-14 Up 16.55355 15.01775 16.72042 30.75508 30.04813 31.68975 PIN17331.1 hypothetical protein CDL12_10014 [Handroanthus impetiginosus] Q05024|TRI1_YEAST Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1 -- -- -- -- -- -- KOG1946 RNA polymerase I transcription factor UAF [K] INFORMATION STORAGE AND PROCESSING Transcription B COG5531 "SWI SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member" Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytoplasm (GO:0005737); PF02201.17 SWIB/MDM2 domain TRINITY_DN16908_c0_g1_i1 11.97933914 17.91156156 6.047116727 0.337609689 -1.566571787 0.039404568 0.117206706 Down 1.892664 0.8153332 2.044942 0.2088595 0.1990517 0.8125911 -- -- Q9SJ96|RPB6B_ARATH DNA-directed RNA polymerases II and V subunit 6B OS=Arabidopsis thaliana OX=3702 GN=NRPB6B PE=1 SV=1 sita:101753098 K03014 "RPB6, POLR2F" "DNA-directed RNA polymerases I, II, and III subunit RPABC2" ko03020|ko00230|ko00240 RNA polymerase|Purine metabolism|Pyrimidine metabolism KOG3405 RNA polymerase subunit K [K] INFORMATION STORAGE AND PROCESSING Transcription -- -- -- "Cellular Component: RNA polymerase V complex (GO:0000419);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-directed 5'-3' RNA polymerase activity (GO:0003899);|Cellular Component: RNA polymerase II, core complex (GO:0005665);|Cellular Component: RNA polymerase III complex (GO:0005666);|Cellular Component: RNA polymerase I complex (GO:0005736);|Biological Process: transcription by RNA polymerase I (GO:0006360);|Biological Process: transcription by RNA polymerase II (GO:0006366);|Biological Process: transcription by RNA polymerase III (GO:0006383);" -- -- TRINITY_DN16922_c0_g1_i1 38.62407456 51.94012551 25.30802361 0.487253802 -1.037254653 0.011079359 0.041423718 Down 1.836593 2.063958 2.516941 0.7606624 0.8217466 0.9464349 AML78171.1 putative LOV domain-containing protein [Rehmannia glutinosa] Q9C9W9|ADO3_ARATH Adagio protein 3 OS=Arabidopsis thaliana OX=3702 GN=ADO3 PE=1 SV=1 sind:105156190 K12116 FKF1 flavin-binding kelch repeat F-box protein 1 ko04712 Circadian rhythm - plant -- -- -- -- -- O ENOG410XRGE "Component of an E3 ubiquitin ligase complex that plays a central role in blue light-dependent circadian cycles. Acts as a blue light photoreceptor, due to the presence of FMN, that mediates light-regulated protein degradation of critical clock components by targeting them to the proteasome complex" "Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: circadian rhythm (GO:0007623);|Biological Process: response to blue light (GO:0009637);|Molecular Function: photoreceptor activity (GO:0009881);|Biological Process: flower development (GO:0009908);|Biological Process: positive regulation of flower development (GO:0009911);|Biological Process: regulation of gene expression (GO:0010468);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: protein-chromophore linkage (GO:0018298);|Cellular Component: SCF ubiquitin ligase complex (GO:0019005);" "PF13418.5,PF13415.5,PF13854.5,PF07646.14,PF13964.5,PF01344.24" "Galactose oxidase, central domain|Galactose oxidase, central domain|Kelch motif|Kelch motif|Kelch motif|Kelch motif" TRINITY_DN16923_c0_g1_i2 44.9957624 89.9915248 0 0 #NAME? 8.08E-29 4.34E-27 Down 7.191849 6.962219 8.605664 2.24E-32 4.66E-26 9.55E-41 PIN12032.1 Serine/threonine protein kinase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG3318 Predicted membrane protein [S] POORLY CHARACTERIZED Function unknown S ENOG41118KQ ER membrane protein complex subunit 4 -- -- -- TRINITY_DN16934_c0_g1_i1 38.44643407 25.41103178 51.48183636 2.02596403 1.01860856 0.012675974 0.046399523 Up 4.071661 2.237331 2.450764 4.23048 4.190303 5.88867 PIN20567.1 Isoamyl acetate-hydrolyzing esterase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16937_c0_g1_i1 61.3586984 122.7173968 0 0 #NAME? 9.80E-39 7.53E-37 Down 16.41155 13.30157 15.12044 5.77E-46 2.70E-61 7.27E-74 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16937_c0_g4_i2 24.2624177 40.59060922 7.934226187 0.195469502 -2.354984562 0.013791705 0.049848463 Down 3.396832 8.330129 3.061928 0.4069727 0.4049809 1.457871 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16939_c0_g1_i1 114.364697 181.6139097 47.11548435 0.259426629 -1.946601522 2.19E-14 4.80E-13 Down 7.252893 7.258009 7.011889 1.75908 1.429142 1.362729 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16941_c0_g1_i1 45.77179617 73.98418666 17.55940568 0.237339984 -2.074972927 2.11E-07 2.23E-06 Down 3.729355 4.767456 4.376231 0.6321207 0.7627807 1.083741 XP_011081705.1 probable protein phosphatase 2C 72 [Sesamum indicum] Q9XGZ9|P2C72_ARATH Probable protein phosphatase 2C 72 OS=Arabidopsis thaliana OX=3702 GN=At5g26010 PE=2 SV=2 -- -- -- -- -- -- KOG0698 Serine/threonine protein phosphatase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0631 Phosphatase Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);|Molecular Function: metal ion binding (GO:0046872); PF00481.20 Protein phosphatase 2C TRINITY_DN16945_c0_g1_i1 19.35067977 34.32289303 4.378466519 0.127566942 -2.970673576 0.000629576 0.003462781 Down 3.768831 9.937784 5.816354 0.9359041 0.9409361 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16945_c0_g2_i1 491.0068142 788.757761 193.2558673 0.245012952 -2.02907008 3.62E-53 4.32E-51 Down 26.16505 24.46766 25.22506 5.687328 5.269559 4.022677 XP_021681924.1 uncharacterized protein LOC110665926 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41122DF NA -- PF07468.10 Agglutinin domain TRINITY_DN16948_c0_g2_i1 33.60195599 6.864448891 60.33946309 8.790139463 3.135886055 1.81E-10 2.81E-09 Up 0.5720011 0.2537857 0.2781635 2.719637 2.886619 2.107569 XP_011096320.1 transcriptional corepressor LEUNIG-like [Sesamum indicum] O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=LUH PE=1 SV=1 -- -- -- -- -- -- KOG0266 WD40 repeat-containing protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410XP3K Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for "Biological Process: response to hypoxia (GO:0001666);|Molecular Function: transcription coactivator activity (GO:0003713);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: cellular response to DNA damage stimulus (GO:0006974);|Biological Process: response to oxidative stress (GO:0006979);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to fungus (GO:0009620);|Biological Process: response to nematode (GO:0009624);|Biological Process: response to auxin (GO:0009733);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: plant-type cell wall modification (GO:0009827);|Biological Process: flower development (GO:0009908);|Biological Process: regulation of flower development (GO:0009909);|Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);|Biological Process: response to aluminum ion (GO:0010044);|Biological Process: meristem maintenance (GO:0010073);|Biological Process: mucilage biosynthetic process (GO:0010192);|Biological Process: response to silver ion (GO:0010272);|Biological Process: galacturonan metabolic process (GO:0010393);|Biological Process: cell differentiation (GO:0030154);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: regulation of embryonic development (GO:0045995);|Biological Process: response to cycloheximide (GO:0046898);|Biological Process: regulation of response to osmotic stress (GO:0047484);|Biological Process: mucilage pectin biosynthetic process (GO:0048358);|Biological Process: mucilage metabolic process involved in seed coat development (GO:0048359);|Biological Process: cellular response to external biotic stimulus (GO:0071217);|Biological Process: mucilage extrusion from seed coat (GO:0080001);|Biological Process: negative regulation of response to salt stress (GO:1901001);|Biological Process: regulation of cell wall pectin metabolic process (GO:1902066);|Biological Process: response to salt (GO:1902074);|Biological Process: regulation of shoot apical meristem development (GO:1902183);|Biological Process: regulation of leaf development (GO:2000024);" -- -- TRINITY_DN16959_c0_g1_i1 453.2863647 842.7379774 63.83475201 0.075746856 -3.722670186 5.30E-127 1.82E-124 Down 102.4633 102.8948 103.8923 5.242969 7.397958 6.213534 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16959_c0_g2_i1 382.6714136 711.3151557 54.02767159 0.075954619 -3.71871849 1.52E-109 4.39E-107 Down 90.21411 90.04225 81.9343 3.73791 5.73553 6.493 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF02496.15 ABA/WDS induced protein TRINITY_DN16975_c0_g1_i1 48.98833912 73.48170429 24.49497396 0.333347929 -1.58489933 2.72E-05 0.000202497 Down 3.131626 3.029906 3.210035 1.156685 0.6299515 0.7301807 XP_011083440.1 probable nucleoredoxin 2 [Sesamum indicum] Q0JIL1|NRX2_ORYSJ Probable nucleoredoxin 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0794400 PE=2 SV=1 sind:105165973 K17609 NXN nucleoredoxin -- -- KOG2501 "Thioredoxin, nucleoredoxin and related proteins" [R] POORLY CHARACTERIZED General function prediction only O ENOG410ZIWC nucleoredoxin-like Cellular Component: cell (GO:0005623);|Biological Process: cell redox homeostasis (GO:0045454);|Molecular Function: protein-disulfide reductase activity (GO:0047134); PF13905.5 Thioredoxin-like TRINITY_DN1697_c0_g1_i1 4.33867605 7.905775406 0.771576693 0.097596587 -3.3570255 0.035400961 0.107769824 Down 1.422915 1.966793 0.6661314 0 5.36E-85 0.2927115 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16981_c0_g1_i1 390.7616138 0 781.5232277 Inf Inf 6.67E-245 5.61E-242 Up 0 0 0 4.898576 4.464182 4.565389 BAN84680.1 Large protein [Rabies viral vector pHEP5.0-delG-mRFP] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF00946.18,PF14318.5" Mononegavirales RNA dependent RNA polymerase|Mononegavirales mRNA-capping region V TRINITY_DN16991_c0_g1_i1 30.20320424 58.52457296 1.881835511 0.032154622 -4.958830068 1.72E-14 3.80E-13 Down 5.11866 6.929353 4.989275 0 0.1423238 0.2992416 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN16991_c1_g1_i1 116.3439066 225.7895219 6.898291321 0.030551866 -5.03259567 7.04E-52 8.01E-50 Down 15.69883 16.02119 19.67665 0.2012005 1.038058 0.003169637 XP_022858986.1 21 kDa protein-like [Olea europaea var. sylvestris] Q9SI74|PMI10_ARATH Pectinesterase inhibitor 10 OS=Arabidopsis thaliana OX=3702 GN=PMEI10 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKJY Invertase pectin methylesterase inhibitor family protein Molecular Function: enzyme inhibitor activity (GO:0004857);|Biological Process: negative regulation of catalytic activity (GO:0043086);|Molecular Function: pectinesterase inhibitor activity (GO:0046910);|Cellular Component: apoplast (GO:0048046);|Biological Process: plant-type cell wall organization or biogenesis (GO:0071669); PF04043.14 Plant invertase/pectin methylesterase inhibitor TRINITY_DN16991_c1_g2_i1 2024.841625 3968.025625 81.65762516 0.020578906 -5.602689922 2.38E-291 2.25E-288 Down 286.4187 277.3431 314.1098 5.066404 4.910743 4.617022 XP_022858986.1 21 kDa protein-like [Olea europaea var. sylvestris] P17407|21KD_DAUCA 21 kDa protein OS=Daucus carota OX=4039 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKJY Invertase pectin methylesterase inhibitor family protein Molecular Function: enzyme inhibitor activity (GO:0004857); PF04043.14 Plant invertase/pectin methylesterase inhibitor TRINITY_DN16996_c0_g1_i1 58.65342748 105.4217829 11.88507209 0.112738295 -3.148950437 7.56E-11 1.22E-09 Down 2.940897 5.237001 3.941467 0.365151 0.3560095 0.380316 XP_023897447.1 uncharacterized protein LOC112009345 [Quercus suber] P93295|M310_ARATH Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN16998_c0_g1_i4 24.96560728 34.69954418 15.23167039 0.438958803 -1.187842547 0.02995283 0.094106368 Down 3.956216 1.504042 3.532712 1.046619 1.03005 1.033537 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17000_c1_g1_i1 86.69487367 157.8795063 15.51024107 0.098241003 -3.347530897 3.71E-25 1.63E-23 Down 19.00579 23.71282 24.02508 1.931456 2.092968 1.247157 XP_023760264.1 uncharacterized protein LOC111908693 [Lactuca sativa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z0Y2 transposon protein -- -- -- TRINITY_DN17000_c1_g2_i1 44.73432559 80.58094736 8.887703808 0.11029535 -3.180556124 2.26E-11 3.88E-10 Down 10.80988 7.364014 12.66881 1.111299 0.8872621 0.6919362 XP_019170991.1 PREDICTED: uncharacterized protein LOC109166493 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z0Y2 transposon protein -- -- -- TRINITY_DN17002_c0_g1_i1 52.725205 101.7753182 3.675091843 0.036109854 -4.791463617 2.04E-23 8.16E-22 Down 4.065804 4.660767 3.556657 0.361243 0 0 KZV17224.1 Replication protein A 70 kDa DNA-binding subunit [Dorcoceras hygrometricum] -- -- adu:107494497 K07466 "RFA1, RPA1, rpa" replication factor A1 ko03430|ko03030|ko03440|ko03420 Mismatch repair|DNA replication|Homologous recombination|Nucleotide excision repair KOG0851 "Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " -- -- -- -- -- -- TRINITY_DN17006_c0_g2_i1 9.323455892 3.68326419 14.96364759 4.062605021 2.022405108 0.036053208 0.109324703 Up 0.5872173 1.24E-41 1.377765 2.122534 1.406644 2.758769 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17025_c0_g1_i1 228.6847951 426.426608 30.94298224 0.072563442 -3.784613308 6.42E-71 1.11E-68 Down 24.24898 22.54163 19.95409 0.8876936 1.395756 1.612549 EYU37453.1 hypothetical protein MIMGU_mgv1a007583mg [Erythranthe guttata] Q6DBP4|PAE8_ARATH Pectin acetylesterase 8 OS=Arabidopsis thaliana OX=3702 GN=PAE8 PE=2 SV=1 -- -- -- -- -- -- KOG4287 Pectin acetylesterase and similar proteins [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis S ENOG410XQKD pectinacetylesterase Cellular Component: extracellular region (GO:0005576);|Cellular Component: plant-type cell wall (GO:0009505);|Molecular Function: pectin acetylesterase activity (GO:0052793);|Biological Process: cell wall organization (GO:0071555); PF03283.12 Pectinacetylesterase TRINITY_DN17028_c0_g1_i2 6.609109256 13.21821851 0 0 #NAME? 8.75E-05 0.000587646 Down 1.914488 2.343904 3.350264 0 0 0 RHN51894.1 putative RNA-directed DNA polymerase [Medicago truncatula] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZXEB Integrase core domain Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN17028_c1_g1_i3 21.32536538 40.7400682 1.910662571 0.046898855 -4.414303474 1.11E-09 1.57E-08 Down 2.938754 3.569186 3.383458 0.09903661 0 0.3024334 XP_011069429.1 "uncharacterized protein LOC105155256, partial [Sesamum indicum]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN17037_c0_g1_i1 60.14344864 3.821565844 116.4653314 30.47581441 4.92959287 2.09E-29 1.15E-27 Up 0.3363293 0.05473065 0.2076528 5.097362 5.16407 4.52026 XP_011091050.1 basic 7S globulin 2 [Sesamum indicum] P13917|7SB1_SOYBN Basic 7S globulin OS=Glycine max OX=3847 GN=BG PE=1 SV=2 -- -- -- -- -- -- KOG1339 Aspartyl protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XNV7 aspartic Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Biological Process: proteolysis (GO:0006508);|Biological Process: protein catabolic process (GO:0030163);|Molecular Function: identical protein binding (GO:0042802);|Molecular Function: nutrient reservoir activity (GO:0045735); "PF14541.5,PF14543.5" Xylanase inhibitor C-terminal|Xylanase inhibitor N-terminal TRINITY_DN17037_c0_g2_i2 592.1835302 92.89806788 1091.468992 11.74910326 3.554478744 4.63E-155 2.26E-152 Up 4.231225 4.686445 4.809234 42.7895 44.92604 42.12558 XP_011091048.1 basic 7S globulin-like [Sesamum indicum] Q8RVH5|7SBG2_SOYBN Basic 7S globulin 2 OS=Glycine max OX=3847 PE=1 SV=1 -- -- -- -- -- -- KOG1339 Aspartyl protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XNV7 aspartic Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Biological Process: proteolysis (GO:0006508);|Biological Process: protein catabolic process (GO:0030163);|Molecular Function: nutrient reservoir activity (GO:0045735); "PF14541.5,PF14543.5" Xylanase inhibitor C-terminal|Xylanase inhibitor N-terminal TRINITY_DN17043_c0_g1_i2 31.558625 54.96456456 8.152685439 0.148326208 -2.753154562 8.52E-08 9.48E-07 Down 3.530452 3.176426 2.452723 0.3849768 0.3735006 0.3258496 AGN52201.1 MYB-related transcription factor [Salvia miltiorrhiza] Q9LE63|MY106_ARATH Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1 sind:105160075 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein Biological Process: cell morphogenesis (GO:0000902);|Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: trichome branching (GO:0010091);|Biological Process: cuticle pattern formation (GO:0035017);|Biological Process: regulation of cutin biosynthetic process (GO:1901957); "PF00249.30,PF13921.5" Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN17045_c0_g2_i11 347.7216653 227.8105201 467.6328104 2.052727021 1.037541785 1.01E-12 1.95E-11 Up 11.34209 10.41648 11.54658 17.95629 18.77969 18.36234 XP_011093555.1 probable WRKY transcription factor 41 [Sesamum indicum] Q9SUP6|WRK53_ARATH Probable WRKY transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=WRKY53 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YBEV Transcription factor "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: chloroplast (GO:0009507);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);|Biological Process: leaf senescence (GO:0010150);|Biological Process: response to ozone (GO:0010193);|Biological Process: response to chitin (GO:0010200);|Biological Process: regulation of defense response (GO:0031347);|Biological Process: response to hydrogen peroxide (GO:0042542);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: regulation of jasmonic acid mediated signaling pathway (GO:2000022);" PF03106.14 WRKY DNA -binding domain TRINITY_DN17047_c0_g1_i1 304.5293009 177.9441674 431.1144344 2.42275114 1.276646222 1.27E-16 3.32E-15 Up 8.056833 8.142274 7.547077 13.5846 16.54155 16.28102 XP_011094621.1 UDP-glycosyltransferase 86A1-like [Sesamum indicum] Q9SJL0|U86A1_ARATH UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana OX=3702 GN=UGT86A1 PE=2 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN17051_c0_g1_i1 26.30394097 6.387013787 46.22086816 7.236694596 2.855330888 3.19E-07 3.29E-06 Up 0.283557 0.2756921 0.5550233 2.438934 2.344054 1.58072 PIN08309.1 H+/oligopeptide symporter [Handroanthus impetiginosus] Q9M817|PTR6_ARATH Protein NRT1/ PTR FAMILY 1.2 OS=Arabidopsis thaliana OX=3702 GN=NPF1.2 PE=1 SV=1 jcu:105638328 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Molecular Function: peptide:proton symporter activity (GO:0015333);|Biological Process: nitrate transport (GO:0015706);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oligopeptide transmembrane transporter activity (GO:0035673);|Molecular Function: low-affinity nitrate transmembrane transporter activity (GO:0080054);|Molecular Function: peptide transmembrane transporter activity (GO:1904680); PF00854.20 POT family TRINITY_DN17055_c0_g1_i2 18.20653105 25.91927684 10.49378526 0.404864122 -1.304490294 0.034801697 0.106309114 Down 1.897461 3.672935 2.421576 1.134994 0.2537592 1.189096 XP_020552732.1 uncharacterized protein LOC105171548 isoform X3 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z9QU NA -- -- -- TRINITY_DN17059_c0_g1_i9 107.9988306 55.31790329 160.679758 2.90466103 1.538369813 1.20E-09 1.69E-08 Up 2.808697 3.660691 3.220162 7.525885 7.976623 7.186043 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17061_c0_g2_i3 52.87937513 78.79878898 26.95996127 0.342136746 -1.547355034 1.99E-05 0.000152523 Down 2.862405 3.011106 3.326391 1.049702 0.9200135 0.5516057 PPR87530.1 hypothetical protein GOBAR_AA33160 [Gossypium barbadense] Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana OX=3702 GN=CDC48D PE=1 SV=1 -- -- -- -- -- -- KOG0730 AAA+-type ATPase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0464 Aaa atpase "Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleoplasm (GO:0005654);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytoskeleton (GO:0005856);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: phragmoplast (GO:0009524);|Biological Process: macroautophagy (GO:0016236);|Molecular Function: ATPase activity (GO:0016887);|Biological Process: ubiquitin-dependent ERAD pathway (GO:0030433);|Biological Process: retrograde protein transport, ER to cytosol (GO:0030970);|Molecular Function: polyubiquitin modification-dependent protein binding (GO:0031593);|Cellular Component: VCP-NPL4-UFD1 AAA ATPase complex (GO:0034098);|Biological Process: positive regulation of protein catabolic process (GO:0045732);|Biological Process: response to cadmium ion (GO:0046686);|Biological Process: mitotic spindle disassembly (GO:0051228);|Biological Process: cell division (GO:0051301);|Biological Process: ER-associated misfolded protein catabolic process (GO:0071712);|Biological Process: autophagosome maturation (GO:0097352);" -- -- TRINITY_DN17064_c0_g1_i1 34.89811753 18.89880052 50.89743454 2.693156874 1.429298268 0.001348942 0.006805129 Up 0.8320782 1.061571 1.141249 2.319643 2.124182 2.193236 AKN09560.1 basic helix-loop-helix transcription factor [Salvia miltiorrhiza] Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YB4F Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: regulation of gibberellin biosynthetic process (GO:0010371);|Biological Process: gibberellin catabolic process (GO:0045487);|Molecular Function: protein dimerization activity (GO:0046983); PF00010.25 Helix-loop-helix DNA-binding domain TRINITY_DN17067_c0_g3_i1 31.94693866 16.27926503 47.61461229 2.924862529 1.548368818 0.0007429 0.004007898 Up 2.044072 2.914762 2.271867 5.588956 7.46812 3.896693 XP_022894339.1 subtilisin-like protease SBT1.9 [Olea europaea var. sylvestris] Q9FHA4|SBT19_ARATH Subtilisin-like protease SBT1.9 OS=Arabidopsis thaliana OX=3702 GN=SBT1.9 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576);|Biological Process: proteolysis (GO:0006508); PF05922.15 Peptidase inhibitor I9 TRINITY_DN17072_c0_g2_i2 40.97856178 17.54690831 64.41021526 3.67074439 1.876072657 0.001556609 0.007720626 Up 0.3278778 1.382559 0.8577842 1.805194 2.109107 3.681546 XP_012844294.1 PREDICTED: uncharacterized protein LOC105964305 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17074_c0_g2_i1 26.86091105 37.70802713 16.01379498 0.424678674 -1.235556431 0.015155862 0.053819137 Down 2.188219 2.78269 2.100856 0.8889361 0.6822659 0.9122126 PIN07800.1 Reductase [Handroanthus impetiginosus] Q9SQR4|ADRC3_ARATH "NADPH-dependent aldehyde reductase-like protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g03980 PE=3 SV=1" sind:105162471 K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase ko00061|ko01040|ko00780 Fatty acid biosynthesis|Biosynthesis of unsaturated fatty acids|Biotin metabolism KOG0725 Reductases with broad range of substrate specificities [R] POORLY CHARACTERIZED General function prediction only S COG1028 Dehydrogenase reductase Cellular Component: chloroplast (GO:0009507);|Molecular Function: oxidoreductase activity (GO:0016491); -- -- TRINITY_DN17075_c0_g1_i2 101.5378759 65.69422774 137.381524 2.091226714 1.064349476 1.93E-05 0.000148527 Up 5.902797 5.31758 3.652255 7.807451 8.937063 8.248513 XP_011091501.1 zinc finger protein ZAT12-like [Sesamum indicum] Q9SLD4|ZAT11_ARATH Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1 -- -- -- -- -- -- KOG1721 FOG: Zn-finger [R] POORLY CHARACTERIZED General function prediction only S COG5048 Zinc finger protein "Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: response to chitin (GO:0010200);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: cellular response to nickel ion (GO:0071289);|Biological Process: regulation of root development (GO:2000280);" "PF13912.5,PF13894.5" C2H2-type zinc finger|C2H2-type zinc finger TRINITY_DN17082_c0_g1_i5 140.9892513 91.3109786 190.6675239 2.088111713 1.062198897 1.19E-06 1.13E-05 Up 3.610649 4.854386 3.908836 7.233369 6.56283 7.080619 XP_011074709.2 uncharacterized protein LOC105159366 [Sesamum indicum] O81816|MO2_ARATH Monooxygenase 2 OS=Arabidopsis thaliana OX=3702 GN=MO2 PE=2 SV=1 -- -- -- -- -- -- KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [CR] METABOLISM|POORLY CHARACTERIZED Energy production and conversion |General function prediction only CH COG0654 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen" Biological Process: response to oomycetes (GO:0002239);|Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: FAD binding (GO:0071949); "PF01494.18,PF05834.11" FAD binding domain|Lycopene cyclase protein TRINITY_DN17091_c0_g1_i1 24.68976501 49.01202083 0.367509184 0.007498348 -7.059211517 9.46E-15 2.15E-13 Down 2.764599 2.948587 2.563781 0.06198139 0 0 PNY15174.1 "ribonuclease H, partial [Trifolium pratense]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y65V Retrotransposon protein -- "PF14392.5,PF14111.5" Zinc knuckle|Domain of unknown function (DUF4283) TRINITY_DN17091_c0_g2_i1 13.64100552 27.28201103 0 0 #NAME? 4.37E-09 5.77E-08 Down 3.506007 3.579467 2.370442 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17094_c0_g1_i1 23.06875416 11.16457094 34.97293738 3.132492737 1.647311164 0.002508627 0.011699796 Up 3.525023 1.277887 2.070614 7.535197 4.222945 6.009794 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF12799.6,PF13855.5,PF00560.32" Leucine Rich repeats (2 copies)|Leucine rich repeat|Leucine Rich Repeat TRINITY_DN17094_c1_g3_i1 6.230737026 1.933947097 10.52752696 5.443544433 2.444546334 0.040664779 0.12025383 Up 0.1261499 0.2434816 0.2865601 0.559845 0.6756952 1.464187 XP_022875314.1 LRR receptor-like serine/threonine-protein kinase GSO1 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF13855.5 Leucine rich repeat TRINITY_DN1709_c0_g1_i1 16.37159745 32.7431949 0 0 #NAME? 7.03E-11 1.14E-09 Down 7.09317 3.567712 5.819241 0 0 0 AIC49634.1 RPLP2 [synthetic construct] Q8TFM9|RLA2_FUSCU 60S acidic ribosomal protein P2 OS=Fusarium culmorum OX=5516 PE=1 SV=1 wic:J056_000654 K02943 "RP-LP2, RPLP2" large subunit ribosomal protein LP2 ko03010 Ribosome KOG3449 60S acidic ribosomal protein P2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2058 Ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translational elongation (GO:0006414); PF00428.18 60s Acidic ribosomal protein TRINITY_DN17100_c0_g1_i1 344.5275248 538.5588625 150.4961871 0.279442411 -1.839377099 1.15E-33 7.41E-32 Down 56.81534 65.8248 59.2706 13.99472 14.78589 12.20156 PIN12182.1 hypothetical protein CDL12_15204 [Handroanthus impetiginosus] Q8GW75|RADL5_ARATH Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1 -- -- -- -- -- -- KOG0724 "Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " K COG5269 Transcription factor Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634); -- -- TRINITY_DN17114_c1_g1_i4 31.98872222 59.75732573 4.220118703 0.070620943 -3.823760101 7.57E-05 0.00051563 Down 2.08991 2.346002 4.969061 1.41E-78 0.059682 0.5197973 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17118_c1_g3_i1 15.13394657 5.836206559 24.43168657 4.186227188 2.065650609 0.004841185 0.020642109 Up 0.3019381 0.5828649 1.635506 2.370136 3.440776 2.296002 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1711_c0_g1_i1 5.179422184 10.35884437 0 0 #NAME? 0.000833975 0.004447967 Down 1.631288 1.603883 1.101626 0 0 0 XP_012853615.1 PREDICTED: gibberellin 20 oxidase 2-like [Erythranthe guttata] Q4PT02|GAOX5_ARATH Gibberellin 20 oxidase 5 OS=Arabidopsis thaliana OX=3702 GN=GA20OX5 PE=2 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: gibberellin biosynthetic process (GO:0009686);|Molecular Function: gibberellin 20-oxidase activity (GO:0045544);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213); PF14226.5 non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN17120_c1_g2_i1 49.68048598 81.94252563 17.41844633 0.212569068 -2.233996414 1.02E-08 1.29E-07 Down 4.957875 4.149985 4.740116 1.029032 0.6931213 0.6367598 PIN18235.1 Tam3-transposase (Ac family) [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDI6 hAT dimerisation domain-containing protein -- PF14291.5 Domain of unknown function (DUF4371) TRINITY_DN17120_c1_g3_i1 18.31058971 34.05916303 2.562016393 0.075222529 -3.732691371 1.69E-06 1.56E-05 Down 6.361189 2.799913 4.66658 0.5868267 0.2459409 6.54E-50 XP_021799956.1 "zinc finger MYM-type protein 1-like, partial [Prunus avium]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDI6 hAT dimerisation domain-containing protein -- PF14291.5 Domain of unknown function (DUF4371) TRINITY_DN17122_c0_g1_i3 86.41250371 130.6739153 42.15109211 0.322566994 -1.632329268 0.007769253 0.030860141 Down 8.007197 16.98805 14.13668 2.54991 0.5347325 7.20389 XP_011089269.1 receptor-like serine/threonine-protein kinase NCRK isoform X1 [Sesamum indicum] Q8VYY5|NCRK_ARATH Receptor-like serine/threonine-protein kinase NCRK OS=Arabidopsis thaliana OX=3702 GN=NCRK PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN17134_c0_g1_i1 81.68205196 34.48203806 128.8820659 3.737658013 1.902134572 8.78E-11 1.41E-09 Up 2.662558 6.589707 3.65107 11.40761 14.18634 13.22537 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17139_c0_g2_i1 12.71803952 25.43607905 0 0 #NAME? 1.36E-08 1.69E-07 Down 1.614393 2.387966 2.034499 8.56E-62 8.38E-25 1.52E-33 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17147_c0_g1_i8 39.56937364 62.47359848 16.6651488 0.266755065 -1.906412433 9.74E-06 7.90E-05 Down 2.323748 2.697902 2.21695 0.6873797 0.4797107 0.4027698 XP_011079481.1 uncharacterized protein LOC105162982 isoform X1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111EXG Plant protein of unknown function (DUF936) -- PF06075.11 Plant protein of unknown function (DUF936) TRINITY_DN17153_c0_g1_i1 46.19456642 13.44185537 78.94727747 5.873242591 2.554157229 1.42E-08 1.76E-07 Up 0.2062063 0.5969456 0.4676046 2.655637 1.786261 1.690773 PIN06264.1 "26S proteasome regulatory complex, subunit PSMD10 [Handroanthus impetiginosus]" Q8LPS2|ACD6_ARATH Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana OX=3702 GN=ACD6 PE=1 SV=1 -- -- -- -- -- -- KOG0504 FOG: Ankyrin repeat [R] POORLY CHARACTERIZED General function prediction only S COG0666 Ankyrin Repeat "Cellular Component: integral component of plasma membrane (GO:0005887);|Biological Process: cell death (GO:0008219);|Biological Process: response to light stimulus (GO:0009416);|Biological Process: response to virus (GO:0009615);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);|Cellular Component: membrane (GO:0016020);|Biological Process: protein ubiquitination (GO:0016567);|Cellular Component: integral component of endoplasmic reticulum membrane (GO:0030176);|Biological Process: response to freezing (GO:0050826);|Biological Process: cellular response to salicylic acid stimulus (GO:0071446);|Biological Process: regulation of defense response to fungus (GO:1900150);|Biological Process: positive regulation of defense response to bacterium (GO:1900426);|Biological Process: positive regulation of defense response to oomycetes (GO:1902290);|Biological Process: regulation of salicylic acid mediated signaling pathway (GO:2000031);" "PF12796.6,PF13962.5,PF13637.5,PF13606.5,PF00023.29,PF13857.5" Ankyrin repeats (3 copies)|Domain of unknown function|Ankyrin repeats (many copies)|Ankyrin repeat|Ankyrin repeat|Ankyrin repeats (many copies) TRINITY_DN17155_c0_g1_i3 63.55565008 123.4207458 3.690554373 0.029902221 -5.063603562 1.22E-28 6.45E-27 Down 18.64217 12.75411 17.86403 0.43157 0.4390981 0.2416151 XP_011092529.1 transcription factor bHLH113-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17157_c1_g1_i1 74.78707262 39.61144479 109.9627004 2.776033569 1.473025013 0.001042394 0.005417175 Up 7.559564 3.777678 8.856628 12.12142 12.5037 20.89751 PON68450.1 Ribonuclease H-like domain containing protein [Parasponia andersonii] Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=3 SV=2 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" -- -- TRINITY_DN17161_c0_g1_i2 227.6751116 145.9564125 309.3938107 2.119768535 1.08390674 8.60E-10 1.23E-08 Up 11.58985 13.78567 13.18379 18.91111 21.94214 25.09902 AHK23659.1 "jasmonate ZIM domain protein 2, partial [Salvia miltiorrhiza]" Q9LMA8|TI10A_ARATH Protein TIFY 10A OS=Arabidopsis thaliana OX=3702 GN=TIFY10A PE=1 SV=1 sind:105163022 K13464 JAZ jasmonate ZIM domain-containing protein ko04075 Plant hormone signal transduction -- -- -- -- -- S ENOG410ZDCD jasmonate ZIM domain-containing protein Cellular Component: nucleus (GO:0005634);|Biological Process: pollen development (GO:0009555);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to jasmonic acid (GO:0009753);|Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);|Biological Process: flower development (GO:0009908);|Biological Process: regulation of defense response (GO:0031347);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: regulation of cellular response to alkaline pH (GO:1900067);|Biological Process: regulation of jasmonic acid mediated signaling pathway (GO:2000022); "PF09425.9,PF06200.13" Divergent CCT motif|tify domain TRINITY_DN17164_c0_g1_i1 9.542713518 19.08542704 0 0 #NAME? 2.21E-05 0.00016749 Down 5.834696 2.136061 2.770586 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17164_c3_g2_i1 21.47480138 12.42333392 30.52626884 2.457172047 1.296998876 0.019376353 0.066076988 Up 1.391826 3.493051 1.552036 4.63884 3.357661 4.495919 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17165_c0_g3_i1 24.83929393 44.87531735 4.803270506 0.107035912 -3.223833177 0.000573209 0.003188683 Down 10.54937 3.072117 8.717224 0.000148499 1.325571 0.7002065 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17165_c0_g4_i2 13.45327532 26.90655063 0 0 #NAME? 4.73E-09 6.23E-08 Down 3.874426 3.428896 3.833568 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17171_c0_g1_i2 37.92212798 22.5029299 53.34132606 2.370416932 1.245140837 0.003094338 0.014037705 Up 1.095104 0.4890409 0.9517644 1.502027 1.934278 1.431701 XP_011098534.1 protein NRT1/ PTR FAMILY 5.8 [Sesamum indicum] Q9SRI2|PTR31_ARATH Protein NRT1/ PTR FAMILY 5.9 OS=Arabidopsis thaliana OX=3702 GN=NPF5.9 PE=2 SV=1 sind:105177178 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Molecular Function: peptide:proton symporter activity (GO:0015333);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oligopeptide transmembrane transporter activity (GO:0035673);|Molecular Function: peptide transmembrane transporter activity (GO:1904680); "PF00854.20,PF07690.15" POT family|Major Facilitator Superfamily TRINITY_DN17174_c0_g1_i6 172.9669304 109.4929779 236.4408829 2.159415951 1.110641165 2.13E-08 2.58E-07 Up 11.2083 9.079113 10.16922 18.86129 18.82395 15.43563 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17174_c0_g5_i1 13.81253293 6.586724483 21.03834137 3.194052131 1.675387859 0.020222769 0.068382908 Up 1.591736 0.3428448 1.336782 3.480786 2.866221 1.657777 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17178_c0_g1_i1 713.9648541 411.1367017 1016.793007 2.47312634 1.306335942 3.35E-33 2.11E-31 Up 19.65693 18.76214 19.15737 36.67203 39.38543 38.80047 XP_011082639.2 basic 7S globulin 2 [Sesamum indicum] P13917|7SB1_SOYBN Basic 7S globulin OS=Glycine max OX=3847 GN=BG PE=1 SV=2 -- -- -- -- -- -- KOG1339 Aspartyl protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XNV7 aspartic Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Biological Process: proteolysis (GO:0006508);|Biological Process: protein catabolic process (GO:0030163);|Molecular Function: identical protein binding (GO:0042802);|Molecular Function: nutrient reservoir activity (GO:0045735); "PF14541.5,PF14543.5" Xylanase inhibitor C-terminal|Xylanase inhibitor N-terminal TRINITY_DN17192_c0_g2_i1 13.16689694 19.93744713 6.396346749 0.32082075 -1.640160638 0.02990012 0.093988151 Down 1.571242 3.165283 1.329694 0.4071994 0.2438455 0.8346327 XP_011091897.1 polyamine oxidase 1-like [Sesamum indicum] Q9FNA2|PAO1_ARATH Polyamine oxidase 1 OS=Arabidopsis thaliana OX=3702 GN=PAO1 PE=1 SV=1 sind:105172222 K13366 "MPAO, PAO1" polyamine oxidase ko00330|ko00410 Arginine and proline metabolism|beta-Alanine metabolism KOG0029 Amine oxidase [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " S ENOG410XSNC amine oxidase Biological Process: polyamine catabolic process (GO:0006598);|Molecular Function: oxidoreductase activity (GO:0016491);|Biological Process: spermine catabolic process (GO:0046208);|Molecular Function: polyamine oxidase activity (GO:0046592);|Molecular Function: flavin adenine dinucleotide binding (GO:0050660);|Molecular Function: norspermine:oxygen oxidoreductase activity (GO:0052894);|Molecular Function: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity (GO:0052895);|Molecular Function: spermine:oxygen oxidoreductase (spermidine-forming) activity (GO:0052901); "PF01593.23,PF13450.5" Flavin containing amine oxidoreductase|NAD(P)-binding Rossmann-like domain TRINITY_DN17203_c0_g1_i1 82.07433607 41.15497316 122.993699 2.988550096 1.579445726 2.82E-08 3.36E-07 Up 1.97437 1.952327 1.181843 3.858521 3.604656 4.794774 XP_011094737.1 UDP-glycosyltransferase 86A1-like [Sesamum indicum] Q9SJL0|U86A1_ARATH UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana OX=3702 GN=UGT86A1 PE=2 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN17206_c2_g1_i1 46.58055917 28.11590248 65.04521585 2.313467117 1.210056593 0.001410703 0.007082064 Up 0.9613243 0.8311568 0.9254683 1.930865 1.455511 1.694181 PIN19196.1 Glutamate-gated kainate-type ion channel receptor subunit GluR5 [Handroanthus impetiginosus] Q9LFN8|GLR26_ARATH Glutamate receptor 2.6 OS=Arabidopsis thaliana OX=3702 GN=GLR2.6 PE=2 SV=2 nnu:104599081 K05387 GRIP "glutamate receptor, ionotropic, plant" -- -- KOG1052 Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [PET] METABOLISM|METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Amino acid transport and metabolism |Signal transduction mechanisms S ENOG410XQQV glutamate receptor Molecular Function: ionotropic glutamate receptor activity (GO:0004970);|Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: intracellular (GO:0005622);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: calcium ion transport (GO:0006816);|Molecular Function: glutamate receptor activity (GO:0008066);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: calcium-mediated signaling (GO:0019722);|Biological Process: cellular response to amino acid stimulus (GO:0071230); "PF01094.27,PF13458.5,PF00060.25" Receptor family ligand binding region|Periplasmic binding protein|Ligand-gated ion channel TRINITY_DN17206_c2_g2_i1 12.61753454 5.063724155 20.17134493 3.983499952 1.994036557 0.010957822 0.041023373 Up 0.2830108 0.5465364 0.6516887 1.987378 0.9739382 2.005371 PIN16362.1 Glutamate-gated kainate-type ion channel receptor subunit GluR5 [Handroanthus impetiginosus] Q9SHV1|GLR22_ARATH Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1 mdm:103438919 K05387 GRIP "glutamate receptor, ionotropic, plant" -- -- KOG1052 Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [PET] METABOLISM|METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Amino acid transport and metabolism |Signal transduction mechanisms S ENOG410XQQV glutamate receptor Molecular Function: ionotropic glutamate receptor activity (GO:0004970);|Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: intracellular (GO:0005622);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: calcium ion transport (GO:0006816);|Molecular Function: glutamate receptor activity (GO:0008066);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: calcium-mediated signaling (GO:0019722);|Biological Process: cellular response to amino acid stimulus (GO:0071230); "PF10613.8,PF00497.19" "Ligated ion channel L-glutamate- and glycine-binding site|Bacterial extracellular solute-binding proteins, family 3" TRINITY_DN17206_c2_g3_i2 72.47518836 36.94866374 108.001713 2.92302081 1.5474601 5.17E-07 5.17E-06 Up 1.168024 0.8527979 1.121114 1.909612 3.039078 2.510785 PIN19196.1 Glutamate-gated kainate-type ion channel receptor subunit GluR5 [Handroanthus impetiginosus] Q9LV72|GLR12_ARATH Glutamate receptor 1.2 OS=Arabidopsis thaliana OX=3702 GN=GLR1.2 PE=2 SV=1 fve:101298662 K05387 GRIP "glutamate receptor, ionotropic, plant" -- -- KOG1052 Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [PET] METABOLISM|METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Amino acid transport and metabolism |Signal transduction mechanisms S ENOG410XQQV glutamate receptor Molecular Function: ionotropic glutamate receptor activity (GO:0004970);|Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: intracellular (GO:0005622);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: calcium ion transport (GO:0006816);|Molecular Function: glutamate receptor activity (GO:0008066);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: calcium-mediated signaling (GO:0019722);|Biological Process: cellular response to amino acid stimulus (GO:0071230); "PF00060.25,PF00497.19,PF10613.8,PF01094.27" "Ligand-gated ion channel|Bacterial extracellular solute-binding proteins, family 3|Ligated ion channel L-glutamate- and glycine-binding site|Receptor family ligand binding region" TRINITY_DN17206_c2_g4_i3 22.58807421 13.04907208 32.12707635 2.462019993 1.299842477 0.016367483 0.057385902 Up 0.7966929 1.048947 0.5930265 1.808253 1.034723 2.039864 PIN16365.1 Glutamate-gated kainate-type ion channel receptor subunit GluR5 [Handroanthus impetiginosus] Q9SHV1|GLR22_ARATH Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1 nnu:104599081 K05387 GRIP "glutamate receptor, ionotropic, plant" -- -- KOG1052 Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [PET] METABOLISM|METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Amino acid transport and metabolism |Signal transduction mechanisms S ENOG410XQQV glutamate receptor Molecular Function: ionotropic glutamate receptor activity (GO:0004970);|Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: intracellular (GO:0005622);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: calcium ion transport (GO:0006816);|Molecular Function: glutamate receptor activity (GO:0008066);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: calcium-mediated signaling (GO:0019722);|Biological Process: cellular response to amino acid stimulus (GO:0071230); "PF01094.27,PF13458.5" Receptor family ligand binding region|Periplasmic binding protein TRINITY_DN17206_c2_g5_i2 12.1627698 4.366172679 19.95936693 4.571364532 2.192624868 0.005176316 0.021820999 Up 0.7672734 0.3675426 0.5776158 2.310972 2.092658 1.402815 PIN19196.1 Glutamate-gated kainate-type ion channel receptor subunit GluR5 [Handroanthus impetiginosus] Q8LGN1|GLR14_ARATH Glutamate receptor 1.4 OS=Arabidopsis thaliana OX=3702 GN=GLR1.4 PE=2 SV=2 gra:105804110 K05387 GRIP "glutamate receptor, ionotropic, plant" -- -- KOG1052 Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [PET] METABOLISM|METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Amino acid transport and metabolism |Signal transduction mechanisms S ENOG410XQQV glutamate receptor Molecular Function: ionotropic glutamate receptor activity (GO:0004970);|Molecular Function: cation channel activity (GO:0005261);|Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: intracellular (GO:0005622);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: calcium ion transport (GO:0006816);|Molecular Function: glutamate receptor activity (GO:0008066);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: calcium-mediated signaling (GO:0019722);|Biological Process: cellular cation homeostasis (GO:0030003);|Biological Process: cellular response to amino acid stimulus (GO:0071230); PF00497.19 "Bacterial extracellular solute-binding proteins, family 3" TRINITY_DN17207_c0_g1_i3 32.41248662 64.45746406 0.367509184 0.005701577 -7.454423315 5.26E-09 6.89E-08 Down 10.86763 4.064088 7.504937 0.1434678 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17207_c0_g2_i2 89.46528288 178.9305658 0 0 #NAME? 7.43E-56 9.48E-54 Down 22.59771 24.86121 24.84425 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17212_c0_g1_i1 1341.410958 538.5470914 2144.274824 3.981592061 1.993345415 6.52E-110 1.90E-107 Up 19.6527 19.94859 18.02432 63.50713 60.65328 60.93906 XP_012844327.1 PREDICTED: cytochrome P450 CYP72A219-like [Erythranthe guttata] H2DH21|C7A29_PANGI Cytochrome P450 CYP72A219 OS=Panax ginseng OX=4054 PE=2 SV=1 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN17228_c0_g1_i2 35.30669305 52.48629114 18.12709495 0.345368182 -1.533792918 0.000498766 0.00281668 Down 3.702841 3.483482 4.750024 1.210911 1.26457 0.8340479 XP_011082933.1 protodermal factor 1-like [Sesamum indicum] Q9S728|PDF1_ARATH Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z5QI NA Cellular Component: extracellular region (GO:0005576); -- -- TRINITY_DN17229_c0_g1_i3 79.27063706 109.1086024 49.43267175 0.453059343 -1.142228063 9.38E-05 0.000625131 Down 4.154622 4.860612 4.41232 1.65552 1.558006 1.688523 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17238_c0_g2_i5 1000.814972 639.1203454 1362.509599 2.131851393 1.092106875 3.32E-29 1.82E-27 Up 25.63461 29.4306 29.73767 52.1974 47.22829 46.39916 EYU41823.1 hypothetical protein MIMGU_mgv1a015450mg [Erythranthe guttata] Q9C912|R35A3_ARATH 60S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=1 sind:105161568 K02917 "RP-L35Ae, RPL35A" large subunit ribosomal protein L35Ae ko03010 Ribosome KOG0887 60S ribosomal protein L35A/L37 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2451 Ribosomal protein Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Biological Process: ribosomal large subunit biogenesis (GO:0042273); PF01247.17 Ribosomal protein L35Ae TRINITY_DN17241_c0_g1_i2 185.3848788 102.3512075 268.41855 2.622524508 1.390956255 6.27E-13 1.23E-11 Up 9.905206 9.905824 9.046927 21.29314 21.53549 18.14918 PIN08415.1 hypothetical protein CDL12_19016 [Handroanthus impetiginosus] P43211|MAL11_MALDO Major allergen Mal d 1 OS=Malus domestica OX=3750 GN=MALD1 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YZ38 Pathogenesis-related protein Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607); PF00407.18 Pathogenesis-related protein Bet v I family TRINITY_DN17243_c0_g1_i1 34.89061142 48.60683675 21.17438609 0.435625675 -1.198839107 0.006881399 0.027845192 Down 1.465431 1.648328 1.450353 0.6594868 0.4390443 0.5159732 PIN25772.1 Serine/threonine protein kinase [Handroanthus impetiginosus] C0LGG7|Y1534_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana OX=3702 GN=At1g53420 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111HDQ Leucine-rich repeat -- "PF07714.16,PF00069.24,PF13855.5,PF12799.6,PF08263.11" Protein tyrosine kinase|Protein kinase domain|Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine rich repeat N-terminal domain TRINITY_DN17249_c0_g1_i1 84.65184852 33.94827321 135.3554238 3.987107768 1.995342601 3.45E-12 6.36E-11 Up 2.81491 6.212467 2.524296 13.62237 10.74971 12.60142 XP_011098799.1 uncharacterized protein LOC105177376 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17260_c0_g2_i2 22.07659405 31.18386762 12.96932048 0.415898395 -1.265696979 0.02126584 0.071178311 Down 2.138538 1.082317 2.473289 0.7994839 0.6077833 0.5456025 XP_012841354.1 PREDICTED: structural maintenance of chromosomes protein 4 [Erythranthe guttata] Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4 OS=Arabidopsis thaliana OX=3702 GN=SMC4 PE=1 SV=1 -- -- -- -- -- -- KOG0996 "Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C)" [BD] INFORMATION STORAGE AND PROCESSING|CELLULAR PROCESSES AND SIGNALING "Chromatin structure and dynamics |Cell cycle control, cell division, chromosome partitioning " D COG1196 Required for chromosome condensation and partitioning (By similarity) Biological Process: mitotic sister chromatid segregation (GO:0000070);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: chromosome (GO:0005694);|Biological Process: mitotic chromosome condensation (GO:0007076);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: cell division (GO:0051301);|Biological Process: meiotic cell cycle (GO:0051321); -- -- TRINITY_DN17261_c0_g2_i1 14.99654967 21.96872735 8.024371985 0.365263397 -1.452990905 0.038610526 0.11531335 Down 3.555076 3.643607 3.839066 0.9220213 2.202793 0.2302342 XP_011075478.1 uncharacterized protein LOC105159942 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17277_c0_g1_i2 51.08099099 30.6095371 71.55244488 2.337586636 1.225019836 0.00071832 0.003892407 Up 1.310887 0.814392 1.195447 2.266391 2.192957 1.859884 XP_011087459.1 calmodulin-binding protein 60 C isoform X2 [Sesamum indicum] Q0WVV6|CB60D_ARATH Calmodulin-binding protein 60 D OS=Arabidopsis thaliana OX=3702 GN=CBP60D PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y99W Calmodulin binding protein-like Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: nucleus (GO:0005634);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: regulation of salicylic acid biosynthetic process (GO:0080142); PF07887.10 Calmodulin binding protein-like TRINITY_DN17279_c0_g1_i1 258.2850656 369.1971259 147.3730054 0.399171594 -1.324919035 1.81E-15 4.34E-14 Down 24.7097 24.72997 28.42045 7.717667 8.145126 9.299492 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1728_c0_g1_i1 6.821912236 13.28158924 0.362235236 0.027273486 -5.196357088 0.000487757 0.002764086 Down 1.603304 2.410053 1.37284 0 0.170105 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17290_c0_g1_i1 23.01099018 12.49870255 33.5232778 2.682140619 1.423384876 0.006666829 0.027092872 Up 1.428495 0.6122026 0.4685616 1.360962 1.952459 2.180316 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1729_c0_g1_i1 14.42695142 24.07418544 4.779717395 0.198541189 -2.332489759 0.047286629 0.135501669 Down 2.636777 6.860661 2.036159 0 1.377133 0.4393356 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17301_c0_g1_i2 30.9093999 15.70917323 46.10962656 2.935203902 1.553460728 0.000960296 0.005037641 Up 0.7940621 0.6506322 0.7230703 1.734687 1.607946 1.769005 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17306_c0_g1_i1 6.57551268 0.976834689 12.17419067 12.46289757 3.639567623 0.002284344 0.010787893 Up 0.4614935 0 0 2.359519 1.924112 0.9682707 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17306_c0_g2_i1 40.04710674 23.95252328 56.1416902 2.343873735 1.228894853 0.00218958 0.01039956 Up 1.42286 1.811543 1.11783 2.893271 2.464059 2.80138 XP_012848588.1 PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 [Erythranthe guttata] Q9SIE0|ALKB2_ARATH DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana OX=3702 GN=ALKBH2 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- L COG3145 Alkylated DNA repair protein Cellular Component: nucleus (GO:0005634);|Biological Process: DNA repair (GO:0006281);|Biological Process: DNA dealkylation involved in DNA repair (GO:0006307);|Molecular Function: ferrous iron binding (GO:0008198);|Biological Process: oxidative DNA demethylation (GO:0035511);|Molecular Function: DNA demethylase activity (GO:0035514);|Molecular Function: DNA-N1-methyladenine dioxygenase activity (GO:0043734);|Molecular Function: cytosine C-5 DNA demethylase activity (GO:0051747);|Molecular Function: 1-ethyladenine demethylase activity (GO:0103053); PF13532.5 2OG-Fe(II) oxygenase superfamily TRINITY_DN17309_c0_g2_i4 893.3851323 536.389981 1250.380284 2.331102981 1.22101274 4.27E-18 1.24E-16 Up 41.49594 38.66155 46.2833 88.3317 72.3579 77.14045 EYU46011.1 hypothetical protein MIMGU_mgv1a016321mg [Erythranthe guttata] Q9LYK9|RS263_ARATH 40S ribosomal protein S26-3 OS=Arabidopsis thaliana OX=3702 GN=RPS26C PE=2 SV=1 sind:105163860 K02976 "RP-S26e, RPS26" small subunit ribosomal protein S26e ko03010 Ribosome KOG1768 40s ribosomal protein S26 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG4830 Ribosomal protein Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF01283.18 Ribosomal protein S26e TRINITY_DN17312_c0_g1_i1 27.5623056 37.72198672 17.40262448 0.461339023 -1.116100766 0.029944392 0.094086368 Down 3.179786 2.457359 1.891373 1.042588 0.9859703 0.7664036 XP_011084989.1 uncharacterized protein LOC105167112 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZDTK NA -- -- -- TRINITY_DN17314_c0_g1_i3 33.76053943 16.91964618 50.60143267 2.990690948 1.580478833 0.00055953 0.003122542 Up 1.195468 1.459824 2.054159 3.439783 5.114622 2.851313 PIM99410.1 hypothetical protein CDL12_28097 [Handroanthus impetiginosus] Q9SHE9|LBD4_ARATH LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHFG lob domain-containing protein -- PF03195.13 Lateral organ boundaries (LOB) domain TRINITY_DN17320_c8_g1_i1 46.40552597 65.01976185 27.79129009 0.427428359 -1.226245465 0.001491412 0.007440344 Down 5.38665 5.68769 5.037527 1.471459 2.35292 1.733177 PPD76176.1 hypothetical protein GOBAR_DD26896 [Gossypium barbadense] O42644|PYRG_SCHPO CTP synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ura7 PE=3 SV=1 sot:102578541 K01937 "pyrG, CTPS" CTP synthase ko00240 Pyrimidine metabolism KOG2387 CTP synthase (UTP-ammonia lyase) [F] METABOLISM Nucleotide transport and metabolism F COG0504 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (By similarity) Molecular Function: CTP synthase activity (GO:0003883);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: 'de novo' pyrimidine nucleobase biosynthetic process (GO:0006207);|Biological Process: glutamine metabolic process (GO:0006541);|Biological Process: 'de novo' CTP biosynthetic process (GO:0044210); -- -- TRINITY_DN17330_c0_g1_i1 595.5445608 396.777267 794.3118545 2.001908679 1.001376164 1.05E-17 2.98E-16 Up 32.13947 34.01133 37.41301 58.8352 54.33705 54.15814 XP_011072072.1 probable metal-nicotianamine transporter YSL7 [Sesamum indicum] Q5JQD7|YSL12_ORYSJ Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica OX=39947 GN=YSL12 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S COG1297 oligo-peptide transporter Cellular Component: integral component of membrane (GO:0016021);|Biological Process: transmembrane transport (GO:0055085); PF03169.14 OPT oligopeptide transporter protein TRINITY_DN17339_c0_g1_i2 83.39162702 40.950218 125.833036 3.072829455 1.619567698 2.06E-08 2.50E-07 Up 2.37242 1.477819 2.203052 5.219132 4.99438 4.750645 PIN14605.1 Serine/threonine protein kinase [Handroanthus impetiginosus] P46573|PBL10_ARATH Probable serine/threonine-protein kinase PBL10 OS=Arabidopsis thaliana OX=3702 GN=PBL10 PE=1 SV=2 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN1734_c0_g1_i1 235.2663305 0 470.5326609 Inf Inf 5.21E-154 2.46E-151 Up 0 0 0 8.52533 8.346381 8.763175 CEL02153.1 hypothetical protein ASPCAL03325 [Aspergillus calidoustus] O24243|MDL1_PRUDU (R)-mandelonitrile lyase 1 OS=Prunus dulcis OX=3755 GN=MDL1 PE=1 SV=1 -- -- -- -- -- -- KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) [R] POORLY CHARACTERIZED General function prediction only E COG2303 oxidoreductase "Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614);|Molecular Function: mandelonitrile lyase activity (GO:0046593);|Molecular Function: flavin adenine dinucleotide binding (GO:0050660);" "PF00732.18,PF05199.12,PF00890.23" GMC oxidoreductase|GMC oxidoreductase|FAD binding domain TRINITY_DN17350_c0_g2_i1 25.25203591 36.08616971 14.4179021 0.399540938 -1.323584761 0.012973457 0.047373833 Down 2.594044 3.293327 2.346782 0.4141692 1.425013 0.751878 XP_012845630.1 PREDICTED: uncharacterized protein LOC105965608 [Erythranthe guttata] -- -- -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN17356_c0_g1_i1 402.4410144 257.8914941 546.9905348 2.121010376 1.084751679 1.06E-13 2.22E-12 Up 21.99625 19.40702 16.52033 29.83106 31.7805 37.66072 PIN02998.1 "Anaphase-promoting complex (APC), subunit 11 [Handroanthus impetiginosus]" Q9SUS5|RHA1B_ARATH E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 SV=1 -- -- -- -- -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Biological Process: response to chitin (GO:0010200);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: response to cadmium ion (GO:0046686);|Molecular Function: metal ion binding (GO:0046872); "PF13639.5,PF12678.6,PF17123.4,PF13923.5" "Ring finger domain|RING-H2 zinc finger domain|RING-like zinc finger|Zinc finger, C3HC4 type (RING finger)" TRINITY_DN17358_c0_g1_i3 189.9467688 282.8028119 97.09072565 0.343315984 -1.542391067 2.53E-15 5.99E-14 Down 19.13169 18.99306 20.02628 5.460697 4.96707 5.703156 KZV46536.1 acid phosphatase 1-like [Dorcoceras hygrometricum] O49195|VSP1_ARATH Vegetative storage protein 1 OS=Arabidopsis thaliana OX=3702 GN=VSP1 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111X3R Acid phosphatase Molecular Function: acid phosphatase activity (GO:0003993);|Cellular Component: vacuole (GO:0005773);|Biological Process: defense response (GO:0006952);|Molecular Function: transcription factor binding (GO:0008134);|Biological Process: response to jasmonic acid (GO:0009753);|Molecular Function: nutrient reservoir activity (GO:0045735); -- -- TRINITY_DN17359_c3_g6_i1 87.61847437 30.70103788 144.5359109 4.707850966 2.235068651 9.06E-15 2.06E-13 Up 0.638954 1.736563 0.9009523 4.689315 4.173764 3.548075 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17359_c4_g2_i1 22.05339175 37.02779855 7.078984946 0.191180281 -2.386994366 5.03E-05 0.000356226 Down 2.24992 2.695341 3.243852 0.3709915 0.3644275 0.4789046 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1737_c0_g1_i1 32.37786578 52.09662546 12.65910609 0.242992823 -2.041014391 3.26E-05 0.000239769 Down 11.02261 5.632642 10.1132 1.024778 2.100317 2.145848 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17383_c0_g1_i4 72.93125448 101.9347437 43.92776525 0.430940067 -1.214440856 5.93E-05 0.000412509 Down 4.917547 5.985278 5.996881 1.384032 2.194798 2.322562 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17388_c0_g5_i1 17.55018093 27.27581064 7.824551212 0.286867779 -1.801542162 0.005620486 0.023421531 Down 2.315983 2.897145 2.119443 0.7540298 0.2808363 0.6323319 PIN21009.1 hypothetical protein CDL12_06299 [Handroanthus impetiginosus] Q9C7W2|ERF61_ARATH Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana OX=3702 GN=ERF061 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YMKN Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: response to chitin (GO:0010200); -- -- TRINITY_DN17389_c0_g1_i1 98.2124012 57.30905555 139.1157468 2.427465355 1.279450705 1.54E-06 1.43E-05 Up 3.469128 2.750088 3.279875 7.663633 5.513807 5.469979 XP_011074971.1 GDSL esterase/lipase At1g33811 [Sesamum indicum] Q8L5Z1|GDL17_ARATH GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana OX=3702 GN=At1g33811 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y9W7 GDSL esterase lipase "Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);" PF00657.21 GDSL-like Lipase/Acylhydrolase TRINITY_DN17393_c0_g1_i4 224.3644822 349.0628579 99.66610657 0.285524811 -1.808311979 9.05E-23 3.47E-21 Down 29.60851 34.04026 28.96645 7.985277 6.081505 7.28898 PIN02836.1 hypothetical protein CDL12_24648 [Handroanthus impetiginosus] Q9FH22|FLZ15_ARATH FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YVCD "Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment)" Cellular Component: P-body (GO:0000932);|Molecular Function: metal ion binding (GO:0046872); PF04570.13 "zinc-finger of the FCS-type, C2-C2" TRINITY_DN17396_c0_g2_i2 41.26500932 23.70452255 58.82549608 2.481614888 1.311279247 0.001285739 0.006521069 Up 3.510155 3.367171 4.478763 9.487712 7.525277 5.620191 PIM98706.1 hypothetical protein CDL12_28812 [Handroanthus impetiginosus] P46689|GASA1_ARATH Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YWQ9 gast1 protein homolog 1 Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: plant-type cell wall (GO:0009505);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: response to gibberellin (GO:0009739);|Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);|Biological Process: response to brassinosteroid (GO:0009741);|Biological Process: unidimensional cell growth (GO:0009826); PF02704.13 Gibberellin regulated protein TRINITY_DN17399_c0_g2_i1 15.46613035 2.21435141 28.71790929 12.96899361 3.696994626 4.31E-05 0.00030872 Up 3.81E-35 1.93E-39 0.9743271 4.499121 1.743496 3.696827 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17403_c0_g1_i2 912.275915 424.7786359 1399.773194 3.295300366 1.720409972 3.20E-65 4.89E-63 Up 31.13974 34.37575 30.67923 82.55048 83.92122 89.39987 XP_011085859.1 probable calcium-binding protein CML45 [Sesamum indicum] Q93Z27|CML46_ARATH Probable calcium-binding protein CML46 OS=Arabidopsis thaliana OX=3702 GN=CML46 PE=1 SV=1 sind:105167736 K02183 CALM calmodulin ko04626|ko04070 Plant-pathogen interaction|Phosphatidylinositol signaling system KOG0027 Calmodulin and related proteins (EF-Hand superfamily) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms DTZ COG5126 Calcium-binding protein Molecular Function: calcium ion binding (GO:0005509); "PF00036.31,PF13405.5,PF13499.5,PF13202.5,PF13833.5" EF hand|EF-hand domain|EF-hand domain pair|EF hand|EF-hand domain pair TRINITY_DN17410_c0_g2_i1 31.98130737 17.27386032 46.68875443 2.702855851 1.434484572 0.00247215 0.011551823 Up 2.062482 0.8385221 2.244515 3.117634 3.360924 4.979621 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17411_c0_g1_i3 845.7319291 374.83814 1316.625718 3.512518011 1.812505623 4.90E-32 2.95E-30 Up 13.46229 12.8549 12.63239 39.94679 37.69571 32.68442 XP_022872527.1 cytochrome b561 and DOMON domain-containing protein At4g17280-like [Olea europaea var. sylvestris] Q9FKH6|B561P_ARATH Cytochrome b561 and DOMON domain-containing protein At5g35735 OS=Arabidopsis thaliana OX=3702 GN=At5g35735 PE=2 SV=1 -- -- -- -- -- -- KOG4293 "Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains" [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XR70 Ferric-chelate reductase Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: oxidation-reduction process (GO:0055114); "PF04526.12,PF03188.15" Protein of unknown function (DUF568)|Eukaryotic cytochrome b561 TRINITY_DN17419_c0_g1_i3 10504.87554 5765.552875 15244.19821 2.644013253 1.402729408 2.76E-125 9.15E-123 Up 316.6066 319.0663 318.7129 667.1565 676.4691 693.0031 ABR13301.1 "putative proline-rich cell wall protein, partial [Prunus dulcis]" Q00451|PRF1_SOLLC 36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41114YU Proline-rich protein -- "PF14547.5,PF14368.5" Hydrophobic seed protein|Probable lipid transfer TRINITY_DN17427_c0_g1_i1 7.8165606 15.6331212 0 0 #NAME? 2.19E-05 0.000166196 Down 4.029201 3.19282 1.153607 1.21E-31 0 2.61E-42 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17427_c1_g2_i2 85.54339714 171.0867943 0 0 #NAME? 3.50E-53 4.19E-51 Down 11.5911 9.605302 8.874382 1.21E-29 1.71E-23 1.45E-33 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17427_c1_g5_i1 63.61726011 87.83954538 39.39497485 0.448487918 -1.156858974 0.021485103 0.071737643 Down 21.97327 23.1907 10.32471 4.486393 8.226797 7.33282 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1742_c0_g1_i1 6.587486473 13.17497295 0 0 #NAME? 0.000105218 0.000694107 Down 1.769978 3.845207 2.106011 0 0 0 XP_018813310.1 PREDICTED: uncharacterized protein LOC108985461 [Juglans regia] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17432_c1_g1_i5 38.54465093 72.64017601 4.449125853 0.061248831 -4.029173885 1.21E-05 9.70E-05 Down 6.025501 8.553488 2.953225 0.4333771 0.2171312 0.2395087 XP_020554652.1 uncharacterized protein LOC105177311 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17434_c0_g2_i1 17.41049529 26.24068452 8.580306059 0.326984841 -1.61270434 0.013093132 0.047747362 Down 4.394175 3.351867 2.919982 0.7852854 0.7833759 1.148185 KDP34602.1 hypothetical protein JCGZ_11979 [Jatropha curcas] Q39231|SUC2_ARATH Sucrose transport protein SUC2 OS=Arabidopsis thaliana OX=3702 GN=SUC2 PE=1 SV=2 jcu:105637145 K15378 SLC45A1_2_4 "solute carrier family 45, member 1/2/4" -- -- KOG0637 Sucrose transporter and related proteins [G] METABOLISM Carbohydrate transport and metabolism U ENOG410XPTR solute carrier family 45 member Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of plasma membrane (GO:0005887);|Biological Process: sucrose metabolic process (GO:0005985);|Molecular Function: sucrose:proton symporter activity (GO:0008506); -- -- TRINITY_DN1743_c0_g1_i1 5.86257779 9.887609658 1.837545922 0.185843291 -2.427841485 0.049069648 0.139571309 Down 2.155322 2.087848 2.057871 0.9227498 0 6.82E-56 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17443_c0_g1_i2 63.66331709 90.07342706 37.25320713 0.413587096 -1.273736921 0.006080371 0.025034582 Down 5.279234 10.04615 5.812749 2.063778 2.230044 2.753882 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17461_c0_g1_i1 365.1690081 234.1662515 496.1717647 2.118886738 1.083306473 2.80E-14 6.06E-13 Up 21.0181 20.87648 21.66227 34.25703 38.155 36.36488 PIN05701.1 hypothetical protein CDL12_21757 [Handroanthus impetiginosus] Q8RWM7|CCB3_ARATH "Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCB3 PE=1 SV=1" sind:105157163 K02221 yggT YggT family protein -- -- -- -- -- -- -- S COG0762 integral membrane protein Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: cytochrome b6f complex assembly (GO:0010190);|Cellular Component: integral component of membrane (GO:0016021); PF02325.16 YGGT family TRINITY_DN17462_c0_g2_i5 40.81623894 58.19855852 23.43391936 0.402654635 -1.312385153 0.001243712 0.006336232 Down 2.420647 2.436577 2.709558 0.6704412 0.8779536 0.910314 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17464_c0_g3_i1 22.76416928 31.31553117 14.21280738 0.453858097 -1.1396868 0.029499312 0.092951706 Down 2.320515 2.576458 4.275639 0.766086 0.9774936 1.596882 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17470_c0_g1_i1 73.39266713 4.990352031 141.7949822 28.41382358 4.82852108 1.15E-34 7.67E-33 Up 0.5891656 0.4328084 0.4491845 9.438945 11.37622 12.45789 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17470_c0_g2_i5 305.4673532 113.8823933 497.052313 4.364610704 2.12585298 1.36E-40 1.11E-38 Up 9.205408 6.867424 6.752006 28.33395 27.34531 24.46796 XP_011076661.1 ankyrin-3-like isoform X1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG0666 Ankyrin Repeat -- "PF13637.5,PF12796.6,PF00023.29,PF13857.5,PF13606.5" Ankyrin repeats (many copies)|Ankyrin repeats (3 copies)|Ankyrin repeat|Ankyrin repeats (many copies)|Ankyrin repeat TRINITY_DN17470_c0_g4_i1 32.2867294 4.473910071 60.09954873 13.43333857 3.747745996 7.38E-12 1.32E-10 Up 0.1025966 0.09726785 0.4588573 1.685541 2.848165 2.268933 XP_022898092.1 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Olea europaea var. sylvestris] Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=BAK1 PE=1 SV=2 sind:105169199 K13416 BAK1 brassinosteroid insensitive 1-associated receptor kinase 1 ko04626|ko04075 Plant-pathogen interaction|Plant hormone signal transduction KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG411233U receptor kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN17470_c1_g5_i2 167.0545656 103.5246701 230.5844612 2.227338286 1.15532069 9.85E-09 1.24E-07 Up 9.081631 7.030313 7.554665 12.11629 16.06117 14.3632 XP_011076661.1 ankyrin-3-like isoform X1 [Sesamum indicum] Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1 -- -- -- -- -- -- KOG0439 VAMP-associated protein involved in inositol metabolism [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " S COG0666 Ankyrin Repeat Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); PF00635.25 MSP (Major sperm protein) domain TRINITY_DN17475_c0_g1_i1 23.61846248 35.65397668 11.58294829 0.324871147 -1.622060478 0.002983795 0.013589184 Down 4.729635 2.366325 3.825069 0.8226805 0.8104453 1.251373 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17477_c0_g1_i8 68.0803562 45.13328465 91.02742776 2.016858034 1.012109537 0.001212962 0.006196958 Up 2.592358 2.651515 2.716492 3.859207 4.594135 4.445503 XP_012836716.1 PREDICTED: agamous-like MADS-box protein AGL62 [Erythranthe guttata] Q941A0|SDH4_ARATH "Succinate dehydrogenase subunit 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH4 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (GO:0005749);|Biological Process: tricarboxylic acid cycle (GO:0006099);|Molecular Function: succinate dehydrogenase (ubiquinone) activity (GO:0008177);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: respiratory chain complex II (GO:0045273);|Molecular Function: metal ion binding (GO:0046872);" -- -- TRINITY_DN17480_c0_g1_i2 8.884298994 14.78950887 2.979089115 0.201432593 -2.311630959 0.017246057 0.05983264 Down 1.047682 1.709896 0.9224061 0.1496526 0.225753 0.2456803 XP_015071242.1 PREDICTED: regulator of telomere elongation helicase 1 isoform X1 [Solanum pennellii] A0A0P0V4R0|RTEL1_ORYSJ Regulator of telomere elongation helicase 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RTEL1 PE=2 SV=1 spen:107015474 K11136 RTEL1 regulator of telomere elongation helicase 1 -- -- KOG1132 Helicase of the DEAD superfamily [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG1199 helicase "Biological Process: recombinational repair (GO:0000725);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: ATP-dependent DNA helicase activity (GO:0004003);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: pollen development (GO:0009555);|Biological Process: regulation of double-strand break repair via homologous recombination (GO:0010569);|Biological Process: DNA duplex unwinding (GO:0032508);|Biological Process: interstrand cross-link repair (GO:0036297);|Biological Process: maintenance of rDNA (GO:0043007);|Biological Process: negative regulation of DNA recombination (GO:0045910);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: root development (GO:0048364);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);|Molecular Function: DNA polymerase binding (GO:0070182);|Biological Process: mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication (GO:0070716);|Biological Process: telomeric loop disassembly (GO:0090657);|Biological Process: negative regulation of t-circle formation (GO:1904430);" -- -- TRINITY_DN17487_c0_g1_i2 113.7472362 68.41181457 159.0826578 2.325368195 1.217459169 7.80E-07 7.62E-06 Up 6.75412 3.70535 6.424757 9.656049 10.94578 11.07253 PIN24027.1 hypothetical protein CDL12_03247 [Handroanthus impetiginosus] Q9SNE1|ERF11_ARATH Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1 sot:102581911 K09286 EREBP EREBP-like factor -- -- -- -- -- -- -- K ENOG41116MV transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to cold (GO:0009409);|Biological Process: response to bacterium (GO:0009617);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: response to chitin (GO:0010200);|Biological Process: regulation of cell death (GO:0010941);|Biological Process: defense response to bacterium (GO:0042742); PF00847.19 AP2 domain TRINITY_DN17488_c0_g1_i2 73.53834718 109.5944801 37.48221428 0.342008231 -1.547897048 5.05E-07 5.07E-06 Down 4.568447 5.623841 5.227595 1.476814 1.415413 1.340717 XP_011077373.2 "LOW QUALITY PROTEIN: probable beta-1,4-xylosyltransferase IRX9 [Sesamum indicum]" Q9ZQC6|IRX9_ARATH "Probable beta-1,4-xylosyltransferase IRX9 OS=Arabidopsis thaliana OX=3702 GN=IRX9 PE=2 SV=1" -- -- -- -- -- -- KOG1476 "Beta-1,3-glucuronyltransferase B3GAT1/SQV-8" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " S ENOG410XP79 glucuronosyltransferase Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: Golgi apparatus (GO:0005794);|Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);|Biological Process: glucuronoxylan metabolic process (GO:0010413);|Biological Process: glucuronoxylan biosynthetic process (GO:0010417);|Molecular Function: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (GO:0015018);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: xylosyltransferase activity (GO:0042285);|Biological Process: cell wall organization (GO:0071555); PF03360.15 Glycosyltransferase family 43 TRINITY_DN17499_c0_g1_i1 27.68030286 17.97381118 37.38679453 2.080070507 1.056632431 0.024206089 0.079094946 Up 2.963737 1.441797 0.9294954 2.907985 2.162987 3.940042 PIN26141.1 hypothetical protein CDL12_01119 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y0MN NA -- -- -- TRINITY_DN17502_c1_g1_i8 42.03345172 62.13957915 21.9273243 0.352872108 -1.502782694 0.000602817 0.003331753 Down 8.112957 4.473893 5.163682 1.375185 1.8947 1.813713 XP_012839184.1 PREDICTED: endoplasmin homolog [Erythranthe guttata] P35016|ENPL_CATRO Endoplasmin homolog OS=Catharanthus roseus OX=4058 GN=HSP90 PE=2 SV=1 gmx:100779976 K09487 "HSP90B, TRA1" heat shock protein 90kDa beta ko04141|ko04626 Protein processing in endoplasmic reticulum|Plant-pathogen interaction KOG0020 "Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0326 Molecular chaperone. Has ATPase activity (By similarity) Molecular Function: ATP binding (GO:0005524);|Cellular Component: endoplasmic reticulum lumen (GO:0005788);|Biological Process: protein folding (GO:0006457);|Molecular Function: unfolded protein binding (GO:0051082); -- -- TRINITY_DN17505_c0_g1_i3 47.3880228 25.12246539 69.65358022 2.772561495 1.47121946 0.000131465 0.000850637 Up 0.9070784 0.3718667 0.8947404 1.629073 1.412717 1.833319 PIN20425.1 hypothetical protein CDL12_06895 [Handroanthus impetiginosus] Q9LHN9|IQM2_ARATH IQ domain-containing protein IQM2 OS=Arabidopsis thaliana OX=3702 GN=IQM2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XYNX Calmodulin-binding Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737); -- -- TRINITY_DN17524_c2_g4_i1 625.1870425 917.1250711 333.249014 0.363362669 -1.460517885 3.04E-36 2.13E-34 Down 52.90878 55.25327 53.15002 16.02553 15.46356 15.80204 AAR09598.1 flavonoid 7-O-methyltransferase [Mentha x piperita] Q9T003|ASMT_ARATH Acetylserotonin O-methyltransferase OS=Arabidopsis thaliana OX=3702 GN=ASMT PE=1 SV=1 -- -- -- -- -- -- KOG3178 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS7T o-methyltransferase Cellular Component: cytoplasm (GO:0005737);|Molecular Function: O-methyltransferase activity (GO:0008171);|Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757);|Molecular Function: acetylserotonin O-methyltransferase activity (GO:0017096);|Biological Process: aromatic compound biosynthetic process (GO:0019438);|Biological Process: melatonin biosynthetic process (GO:0030187);|Molecular Function: protein dimerization activity (GO:0046983); "PF00891.17,PF08100.10" O-methyltransferase|Dimerisation domain TRINITY_DN17525_c1_g3_i1 172.3659277 112.8803542 231.8515012 2.053957952 1.038406648 4.64E-07 4.67E-06 Up 16.16786 12.02277 16.31874 20.14075 27.71642 25.83009 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17534_c0_g1_i1 81.86614117 50.69793237 113.03435 2.229565283 1.156762444 5.51E-05 0.000387072 Up 4.167719 8.242495 6.440555 9.986014 13.58264 10.30302 XP_011078580.1 uncharacterized protein LOC105162273 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17538_c0_g1_i3 29.31044261 17.12243966 41.49844556 2.423629249 1.277169021 0.00751152 0.029961389 Up 0.829992 1.612101 1.115607 2.569992 2.399678 1.949879 XP_011086573.1 uncharacterized protein LOC105168262 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41114DH Protein of unknown function (DUF1645) -- PF07816.10 Protein of unknown function (DUF1645) TRINITY_DN17542_c0_g1_i2 41.40035838 65.79688584 17.00383092 0.258429114 -1.952159484 3.76E-06 3.28E-05 Down 2.919318 3.248003 2.843995 0.797427 0.6374793 0.4446726 XP_020554527.1 cytochrome b561 and DOMON domain-containing protein At5g47530-like [Sesamum indicum] Q9FKH6|B561P_ARATH Cytochrome b561 and DOMON domain-containing protein At5g35735 OS=Arabidopsis thaliana OX=3702 GN=At5g35735 PE=2 SV=1 -- -- -- -- -- -- KOG4293 "Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains" [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410YA2M Protein of unknown function (DUF568) Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: oxidation-reduction process (GO:0055114); PF04526.12 Protein of unknown function (DUF568) TRINITY_DN17543_c0_g2_i2 13.63468269 7.607207617 19.66215776 2.584674791 1.369982769 0.046050747 0.132697362 Up 1.368246 1.308637 0.517372 1.460657 2.919711 2.191181 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17545_c0_g1_i2 40.49839319 20.14603813 60.85074826 3.020482135 1.594778854 8.01E-05 0.000542966 Up 1.783608 1.774676 1.181442 3.78381 4.100321 3.668851 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17546_c0_g1_i2 26.27272899 52.54545799 0 0 #NAME? 4.59E-17 1.24E-15 Down 6.320406 4.015477 5.332375 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17546_c0_g2_i1 37.08082618 74.16165236 0 0 #NAME? 4.81E-14 1.03E-12 Down 9.150005 8.614451 4.252207 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17546_c0_g3_i3 6.758612002 13.517224 0 0 #NAME? 8.33E-05 0.000562144 Down 2.267656 0.7795637 1.384458 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17546_c0_g4_i1 9.981141765 19.96228353 0 0 #NAME? 0.027756748 0.088530217 Down 9.080402 1.044342 1.413559 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17551_c0_g1_i2 62.37738534 36.73119244 88.02357823 2.396425827 1.260884287 0.000119617 0.000779579 Up 2.220446 3.114947 2.35033 4.342792 4.490425 6.069173 XP_011095066.1 abscisic acid receptor PYL4 [Sesamum indicum] O80920|PYL4_ARATH Abscisic acid receptor PYL4 OS=Arabidopsis thaliana OX=3702 GN=PYL4 PE=1 SV=1 sind:105174608 K14496 PYL abscisic acid receptor PYR/PYL family ko04075 Plant hormone signal transduction -- -- -- -- -- S ENOG4111MYF abscisic acid receptor Molecular Function: protein phosphatase inhibitor activity (GO:0004864);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Molecular Function: abscisic acid binding (GO:0010427);|Molecular Function: signaling receptor activity (GO:0038023);|Molecular Function: protein homodimerization activity (GO:0042803);|Biological Process: regulation of protein serine/threonine phosphatase activity (GO:0080163); PF10604.8 Polyketide cyclase / dehydrase and lipid transport TRINITY_DN17552_c0_g1_i2 20.36638859 38.48870644 2.244070747 0.058304655 -4.10024512 9.01E-08 9.99E-07 Down 8.450266 4.405747 4.861624 0 0.4275432 0.4539778 XP_023913142.1 uncharacterized protein LOC112024740 [Quercus suber] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y1CH Reverse transcriptase (RNA-dependent DNA polymerase) -- PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN17552_c0_g2_i7 118.9798508 190.69271 47.2669916 0.247869945 -2.012344742 9.03E-16 2.21E-14 Down 3.753786 3.636471 3.651472 0.7257966 0.6658114 0.7955574 XP_012836341.1 PREDICTED: uncharacterized protein LOC105956976 [Erythranthe guttata] P92555|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y1CH Reverse transcriptase (RNA-dependent DNA polymerase) Cellular Component: mitochondrion (GO:0005739); PF14392.5 Zinc knuckle TRINITY_DN17552_c0_g4_i1 29.00800916 47.26230085 10.75371747 0.227532669 -2.135854391 2.53E-05 0.000189288 Down 2.759137 2.162692 2.798355 0.3234073 0.6310966 0.4861734 XP_023920420.1 uncharacterized protein LOC112031954 [Quercus suber] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN17552_c0_g5_i1 25.75468643 38.97258763 12.53678522 0.321682136 -1.636292275 0.001894843 0.009175655 Down 2.18071 2.710692 2.571149 1.335723 0.359044 0.250903 XP_018817289.1 PREDICTED: uncharacterized protein At4g02000-like [Juglans regia] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y1CH Reverse transcriptase (RNA-dependent DNA polymerase) -- -- -- TRINITY_DN17556_c0_g2_i1 29.88324913 43.90421052 15.86228773 0.361293086 -1.468758447 0.002302187 0.010857474 Down 1.648743 2.053736 2.143697 0.8855664 0.4840484 0.2985702 XP_011083823.1 protein DETOXIFICATION 27-like [Sesamum indicum] Q9FKQ1|DTX27_ARATH Protein DETOXIFICATION 27 OS=Arabidopsis thaliana OX=3702 GN=DTX27 PE=2 SV=1 sind:105166234 K03327 "TC.MATE, SLC47A, norM, mdtK, dinF" "multidrug resistance protein, MATE family" -- -- KOG1347 "Uncharacterized membrane protein, predicted efflux pump" [R] POORLY CHARACTERIZED General function prediction only V COG0534 Mate efflux family protein Biological Process: drug transmembrane transport (GO:0006855);|Molecular Function: drug transmembrane transporter activity (GO:0015238);|Molecular Function: antiporter activity (GO:0015297);|Cellular Component: integral component of membrane (GO:0016021); PF01554.17 MatE TRINITY_DN17557_c0_g1_i3 339.3394923 95.9131541 582.7658306 6.075974 2.603115696 4.19E-21 1.49E-19 Up 5.044916 9.211519 5.14748 25.75019 36.34557 32.90084 XP_002266430.1 PREDICTED: kunitz trypsin inhibitor 2 [Vitis vinifera] P13087|MIRA_SYNDU Miraculin OS=Synsepalum dulcificum OX=3743 PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YHN1 trypsin and protease inhibitor family protein Kunitz family protein -- PF00197.17 Trypsin and protease inhibitor TRINITY_DN1755_c0_g1_i1 3.354509223 0 6.709018446 Inf Inf 0.006880581 0.027844364 Up 0 0 0 1.002934 0.331154 0.721861 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17564_c0_g1_i2 2.982813958 5.965627915 0 0 #NAME? 0.020024965 0.067880908 Down 0.6604727 1.510589 0.502688 4.50E-19 9.59E-41 1.55E-36 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17564_c2_g2_i6 34.36611285 55.90579052 12.82643519 0.229429457 -2.123877457 8.69E-05 0.00058389 Down 2.795583 1.562378 3.005825 0.1094808 0.3944915 0.8563335 XP_023929660.1 uncharacterized protein LOC112040975 [Quercus suber] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN17564_c2_g6_i4 58.05821311 92.17086237 23.94556385 0.259795376 -1.944552342 0.000229777 0.001407215 Down 6.016407 2.794241 5.018116 1.043743 0.5608138 1.295523 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17567_c0_g1_i1 131.6693285 83.00849653 180.3301605 2.172430149 1.11930979 1.32E-06 1.25E-05 Up 6.648186 6.623404 8.625947 11.87358 12.94369 13.56325 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17568_c0_g1_i1 462.2942095 296.8723671 627.716052 2.114430717 1.080269289 4.50E-17 1.21E-15 Up 36.16291 37.26946 36.77599 60.75196 64.45198 62.8202 PIN05709.1 60S ribosomal protein L30 [Handroanthus impetiginosus] O49884|RL30_LUPLU 60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1 sind:105176488 K02908 "RP-L30e, RPL30" large subunit ribosomal protein L30e ko03010 Ribosome KOG2988 60S ribosomal protein L30 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1911 (ribosomal) protein Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF01248.25 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TRINITY_DN17569_c0_g1_i3 127.8769184 44.69021481 211.0636221 4.722815116 2.23964706 4.63E-20 1.52E-18 Up 2.499342 2.875432 3.568326 9.873168 12.30939 11.89342 PIN19497.1 Calcium/calmodulin-dependent protein kinase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YUY6 NA -- -- -- TRINITY_DN1756_c0_g1_i1 13.42918902 20.57206559 6.286312457 0.305575171 -1.710400771 0.02302891 0.075953739 Down 2.111462 1.972723 1.647227 0.2014448 0.8125592 0.4738099 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17578_c0_g2_i1 82.6085808 117.0722663 48.14489526 0.411240824 -1.281944607 8.16E-06 6.71E-05 Down 13.54388 15.78266 15.81031 6.428551 4.623894 3.866519 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17578_c0_g3_i1 42.3392803 76.51286995 8.165690653 0.1067231 -3.22805562 9.53E-10 1.35E-08 Down 6.565995 11.00571 12.17559 0.7386463 0.9672608 0.8612513 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17578_c0_g4_i1 50.84047316 85.90880439 15.77214193 0.183591682 -2.445427396 3.43E-06 3.02E-05 Down 7.717097 14.93118 12.41374 2.533975 0.2574815 2.446278 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17589_c0_g1_i1 59.42585222 33.42142697 85.43027746 2.5561529 1.353974136 5.33E-05 0.000375742 Up 1.223727 1.660093 1.141661 2.407701 2.488683 3.430918 XP_012858003.1 "PREDICTED: zinc transporter 4, chloroplastic isoform X1 [Erythranthe guttata]" O04089|ZIP4_ARATH "Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ZIP4 PE=2 SV=1" sind:105164670 K14709 "SLC39A1_2_3, ZIP1_2_3" "solute carrier family 39 (zinc transporter), member 1/2/3" -- -- KOG1558 Fe2+/Zn2+ regulated transporter [P] METABOLISM Inorganic ion transport and metabolism P ENOG4111GP2 zinc transporter Molecular Function: zinc ion transmembrane transporter activity (GO:0005385);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: integral component of membrane (GO:0016021); PF02535.21 ZIP Zinc transporter TRINITY_DN17592_c0_g1_i1 42.57569261 61.6569951 23.49439012 0.381049872 -1.391948263 0.017686815 0.061160784 Down 4.856694 12.24621 7.408526 2.947336 1.677451 2.851628 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17598_c0_g1_i1 38.54396975 53.97196578 23.11597372 0.428295938 -1.2233201 0.017925706 0.061854926 Down 14.43485 11.00763 6.343822 2.299302 4.069307 4.654865 PIN26753.1 hypothetical protein CDL12_00472 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YC54 DUF630 DUF632 domains containing protein -- -- -- TRINITY_DN1759_c0_g1_i1 79.73844957 121.9943255 37.4825736 0.307248501 -1.702522125 1.38E-08 1.71E-07 Down 5.554608 5.515717 5.186469 1.764343 1.081598 1.17643 XP_020552784.1 UDP-glycosyltransferase 86A1-like [Sesamum indicum] Q9SJL0|U86A1_ARATH UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana OX=3702 GN=UGT86A1 PE=2 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN175_c0_g1_i1 5.758394286 11.51678857 0 0 #NAME? 0.000304418 0.001815353 Down 0.920581 1.256042 1.792868 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17602_c0_g1_i3 44.44699414 26.98500205 61.90898622 2.294199797 1.197991038 0.001505335 0.007503203 Up 1.423379 0.9237265 0.8238971 2.171536 1.992823 1.722704 XP_022888167.1 uncharacterized protein LOC111403778 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z83V ZnF_U1 -- "PF12874.6,PF12171.7" Zinc-finger of C2H2 type|Zinc-finger double-stranded RNA-binding TRINITY_DN17603_c0_g2_i5 134.4815903 189.8433001 79.11988051 0.416764144 -1.262696932 2.90E-08 3.45E-07 Down 11.92689 13.98754 12.5232 5.440891 3.494586 4.001191 XP_011093544.1 uncharacterized protein LOC105173488 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG2073 SAP family cell cycle dependent phosphatase-associated protein [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " T ENOG410XRM1 "Protein phosphatase 6, regulatory subunit" -- -- -- TRINITY_DN17609_c0_g1_i2 147.3400904 85.36199018 209.3181906 2.452124068 1.294031976 2.15E-09 2.94E-08 Up 5.012642 4.937543 4.886315 8.991899 10.00717 10.36906 XP_011096230.1 uncharacterized protein LOC105175481 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZK5T fiber expressed protein -- "PF05553.10,PF14364.5" Cotton fibre expressed protein|Domain of unknown function (DUF4408) TRINITY_DN17612_c0_g1_i2 27.09117066 41.5098707 12.67247063 0.305288126 -1.711756618 0.000845142 0.004500061 Down 2.542559 3.228571 2.730747 0.8356694 0.4571153 0.7454352 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17614_c0_g1_i1 92.48033975 48.80766854 136.153011 2.789582355 1.480049144 6.29E-08 7.14E-07 Up 1.085974 1.241146 1.239701 2.850297 2.345996 2.814803 PIN00628.1 Glutamate-gated kainate-type ion channel receptor subunit GluR5 [Handroanthus impetiginosus] Q8LGN0|GLR27_ARATH Glutamate receptor 2.7 OS=Arabidopsis thaliana OX=3702 GN=GLR2.7 PE=2 SV=3 vvi:100260637 K05387 GRIP "glutamate receptor, ionotropic, plant" -- -- KOG1052 Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [PET] METABOLISM|METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Amino acid transport and metabolism |Signal transduction mechanisms S ENOG410XQQV glutamate receptor Molecular Function: ionotropic glutamate receptor activity (GO:0004970);|Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: vacuole (GO:0005773);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: calcium ion transport (GO:0006816);|Molecular Function: glutamate receptor activity (GO:0008066);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: calcium-mediated signaling (GO:0019722);|Biological Process: cellular response to amino acid stimulus (GO:0071230); "PF01094.27,PF00060.25,PF00497.19,PF13458.5,PF10613.8" "Receptor family ligand binding region|Ligand-gated ion channel|Bacterial extracellular solute-binding proteins, family 3|Periplasmic binding protein|Ligated ion channel L-glutamate- and glycine-binding site" TRINITY_DN17618_c0_g1_i1 47.41886891 27.95251874 66.88521909 2.392815464 1.258709139 0.000679539 0.003704817 Up 0.7952268 1.151226 0.7286545 1.946528 1.531881 1.676297 XP_011088186.1 probable indole-3-acetic acid-amido synthetase GH3.1 [Sesamum indicum] O82333|GH31_ARATH Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Arabidopsis thaliana OX=3702 GN=GH3.1 PE=2 SV=1 sind:105169490 K14487 GH3 auxin responsive GH3 gene family ko04075 Plant hormone signal transduction -- -- -- -- -- S ENOG410XQH0 Indole-3-acetic acid-amido synthetase Biological Process: response to auxin (GO:0009733);|Molecular Function: ligase activity (GO:0016874); PF03321.12 GH3 auxin-responsive promoter TRINITY_DN17632_c0_g3_i2 28.77591638 12.43997342 45.11185935 3.626363002 1.858523347 0.000149262 0.000955231 Up 1.709953 0.8057024 0.9572878 3.39203 2.74466 3.902937 XP_011090449.1 ethylene-responsive transcription factor ABR1-like [Sesamum indicum] Q70II3|EF110_ARATH Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YYVP AP2 "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);" -- -- TRINITY_DN17632_c0_g4_i1 7.808140055 3.129777058 12.48650305 3.989582268 1.996237696 0.044992999 0.130261318 Up 0.396954 0.7888837 0.633829 1.720711 3.143611 0.9463417 PIN26839.1 hypothetical protein CDL12_00383 [Handroanthus impetiginosus] Q9FGF8|ABR1_ARATH Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN=ABR1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YYVP AP2 Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: response to glucose (GO:0009749);|Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: defense response to fungus (GO:0050832);|Biological Process: response to salt (GO:1902074); PF00847.19 AP2 domain TRINITY_DN17633_c0_g2_i2 17.31437488 28.74896213 5.879787632 0.204521736 -2.289673921 0.000646748 0.00354563 Down 5.611854 3.725102 5.618929 1.123456 1.123904 0.302145 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17638_c0_g1_i1 70.7414591 43.01355163 98.46936657 2.289263798 1.194883718 7.77E-05 0.000528248 Up 0.9452842 1.599541 0.8909336 2.326357 1.93094 2.100803 PIN19229.1 Non-reducing end alpha-L-arabinofuranosidase [Handroanthus impetiginosus] Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- G COG1472 hydrolase family 3 "Molecular Function: xylan 1,4-beta-xylosidase activity (GO:0009044);|Cellular Component: plant-type cell wall (GO:0009505);|Biological Process: seed coat development (GO:0010214);|Biological Process: arabinan catabolic process (GO:0031222);|Biological Process: xylan catabolic process (GO:0045493);|Molecular Function: alpha-L-arabinofuranosidase activity (GO:0046556);|Cellular Component: apoplast (GO:0048046);" "PF01915.21,PF00933.20,PF14310.5" Glycosyl hydrolase family 3 C-terminal domain|Glycosyl hydrolase family 3 N terminal domain|Fibronectin type III-like domain TRINITY_DN17641_c0_g2_i2 13.43306496 20.12055316 6.745576771 0.335258018 -1.576656259 0.03421512 0.10486307 Down 2.855305 2.195886 1.867132 0.7482226 0.2990155 0.8529961 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17641_c1_g3_i1 31.81623815 62.8608996 0.771576693 0.01227435 -6.348209543 1.54E-16 3.99E-15 Down 3.042861 3.699766 5.217928 4.50E-35 3.94E-24 0.1057121 XP_020247843.1 F-box/LRR-repeat protein 20-like [Asparagus officinalis] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN17655_c1_g2_i1 27.80737527 40.85780699 14.75694354 0.361178062 -1.469217829 0.002738158 0.012641703 Down 4.338081 6.172276 9.001857 2.037891 2.38025 1.178044 KYP60991.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein -- -- -- TRINITY_DN17662_c0_g1_i1 192.0579255 124.7441578 259.3716931 2.079229182 1.056048787 5.61E-08 6.41E-07 Up 14.6721 11.33912 10.07227 20.17011 17.13622 23.2978 XP_012838342.1 PREDICTED: uncharacterized protein LOC105958884 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YS3T NA -- -- -- TRINITY_DN17669_c0_g1_i2 18.61015534 7.239068709 29.98124198 4.14158826 2.050184134 0.005960143 0.024628926 Up 0.5311666 0.3369566 1.590095 4.178025 2.249486 1.934642 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17673_c0_g6_i4 181.6866548 106.9982222 256.3750874 2.396068666 1.260669253 4.12E-07 4.19E-06 Up 2.873022 2.366147 2.332427 5.19559 5.595891 3.81958 XP_020554436.1 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Sesamum indicum] O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24,PF01453.23,PF00954.19,PF08276.10" Protein tyrosine kinase|Protein kinase domain|D-mannose binding lectin|S-locus glycoprotein domain|PAN-like domain TRINITY_DN17683_c1_g1_i1 15.42919199 5.297800118 25.56058387 4.824754294 2.270455474 0.001411726 0.007085636 Up 0.482661 0.06630842 0.522518 1.629383 1.394847 1.168888 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17683_c3_g2_i1 17.84186284 2.838530762 32.84519492 11.57119569 3.532466045 0.011350065 0.042282602 Up 0.000400468 0.2778373 1.242464 0.8501288 7.297431 7.270619 XP_012844633.1 PREDICTED: uncharacterized protein LOC105964676 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17684_c0_g2_i1 7.53805679 15.07611358 0 0 #NAME? 2.77E-05 0.000206553 Down 2.269261 2.619721 1.7564 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17689_c0_g1_i1 31.19169832 51.49609176 10.88730488 0.211420022 -2.241816082 8.16E-05 0.000551531 Down 11.28707 7.589557 5.632373 1.367063 0.67427 2.097737 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17689_c0_g2_i1 13.43079399 21.69608223 5.165505742 0.238084724 -2.07045304 0.00728007 0.029187794 Down 6.029112 3.251764 3.272138 0 1.64216 0.8233623 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17689_c1_g2_i2 374.5587962 580.277375 168.8402174 0.290964674 -1.781084087 1.38E-20 4.70E-19 Down 29.28253 22.98493 24.09095 5.466623 5.428728 7.092251 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17692_c0_g3_i1 6.307168131 11.52763055 1.086705707 0.094269651 -3.407062806 0.008383111 0.032878398 Down 2.348468 3.181868 1.845338 0 0.4713423 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17695_c0_g2_i1 34.37220189 49.67876235 19.06564142 0.383778511 -1.381654164 0.008258789 0.032481801 Down 6.535162 3.74671 3.915816 0.4203453 1.862047 2.166938 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17700_c1_g2_i1 173.3129827 244.2890582 102.3369072 0.418917278 -1.255262707 4.38E-10 6.51E-09 Down 27.00354 26.80829 28.92898 11.67493 8.380512 7.942241 XP_024985322.1 histone H3-like centromeric protein CSE4 [Cynara cardunculus var. scolymus] Q6LCK1|H32_BRANA Histone H3.2 OS=Brassica napus OX=3708 PE=2 SV=3 -- -- -- -- -- -- KOG1745 Histones H3 and H4 [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics B COG2036 "Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling" Cellular Component: nucleosome (GO:0000786);|Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Molecular Function: protein heterodimerization activity (GO:0046982); PF00125.23 Core histone H2A/H2B/H3/H4 TRINITY_DN17702_c0_g1_i3 524.4327902 753.2163742 295.6492062 0.392515639 -1.34917796 1.09E-27 5.50E-26 Down 30.62232 33.15894 32.36662 9.014786 10.47514 10.97827 XP_012848483.1 PREDICTED: uncharacterized protein LOC105968402 [Erythranthe guttata] O64469|GDL37_ARATH GDSL esterase/lipase At2g19060 OS=Arabidopsis thaliana OX=3702 GN=At2g19060 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG411139P GDSL esterase lipase At1g29670-like "Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);" -- -- TRINITY_DN17704_c0_g1_i2 229.7190087 356.229027 103.2089904 0.289726503 -1.787236431 9.79E-23 3.76E-21 Down 24.14297 23.39183 22.15976 4.460808 6.320648 5.525788 PIN16574.1 Multitransmembrane protein [Handroanthus impetiginosus] Q8L9J7|SWET1_ARATH Bidirectional sugar transporter SWEET1 OS=Arabidopsis thaliana OX=3702 GN=SWEET1 PE=1 SV=1 sind:105179868 K15382 "SLC50A, SWEET" solute carrier family 50 (sugar transporter) -- -- KOG1623 Multitransmembrane protein [R] POORLY CHARACTERIZED General function prediction only U ENOG4111M4R sugar transporter Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of plasma membrane (GO:0005887);|Molecular Function: sugar transmembrane transporter activity (GO:0051119);|Biological Process: protein homooligomerization (GO:0051260); PF03083.15 Sugar efflux transporter for intercellular exchange TRINITY_DN17705_c0_g1_i1 267.48103 145.9658529 388.9962072 2.664980881 1.414125183 1.18E-10 1.86E-09 Up 14.1341 15.14301 10.43429 31.85426 23.08188 30.5046 XP_011098774.1 probable calcium-binding protein CML45 [Sesamum indicum] Q9MBG5|CML45_ARATH Probable calcium-binding protein CML45 OS=Arabidopsis thaliana OX=3702 GN=CML45 PE=2 SV=1 sind:105177352 K02183 CALM calmodulin ko04626|ko04070 Plant-pathogen interaction|Phosphatidylinositol signaling system KOG0027 Calmodulin and related proteins (EF-Hand superfamily) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms DTZ COG5126 Calcium-binding protein Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: nucleus (GO:0005634);|Biological Process: calcium-mediated signaling (GO:0019722);|Molecular Function: enzyme regulator activity (GO:0030234);|Biological Process: spindle pole body organization (GO:0051300); "PF00036.31,PF13405.5,PF13499.5,PF13833.5,PF13202.5" EF hand|EF-hand domain|EF-hand domain pair|EF-hand domain pair|EF hand TRINITY_DN17712_c0_g1_i7 59.84943789 110.845273 8.853602799 0.079873526 -3.646138786 9.98E-20 3.21E-18 Down 10.24473 8.500455 8.315222 0.5937139 0.7760223 0.4090581 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17713_c0_g1_i1 44.08017528 21.97604884 66.18430173 3.011656109 1.590557043 6.88E-05 0.000472487 Up 0.776108 0.90242 1.090816 2.592422 1.921608 2.299271 XP_011088907.1 uncharacterized protein LOC105170022 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z3DC Domain-Containing protein -- "PF03107.15,PF00130.21,PF00628.28" C1 domain|Phorbol esters/diacylglycerol binding domain (C1 domain)|PHD-finger TRINITY_DN17715_c3_g2_i1 91.21892118 144.6306698 37.80717256 0.261404947 -1.935641652 3.36E-06 2.96E-05 Down 8.972653 5.677967 5.917812 0.8341129 2.074986 1.430047 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17727_c0_g1_i5 198.9569988 275.7430482 122.1709494 0.44306085 -1.174423242 5.36E-10 7.87E-09 Down 17.99133 16.30158 16.46382 5.868239 6.306767 5.991152 PIN03578.1 hypothetical protein CDL12_23893 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41116KI NA -- -- -- TRINITY_DN17736_c0_g1_i3 139.5188179 200.1751007 78.86253497 0.393967755 -1.343850542 2.47E-09 3.36E-08 Down 12.158 14.38915 12.66682 3.984921 4.927924 3.554798 PIM97644.1 hypothetical protein CDL12_29885 [Handroanthus impetiginosus] P13088|AUX22_SOYBN Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1 sind:105164104 K14484 IAA auxin-responsive protein IAA ko04075 Plant hormone signal transduction -- -- -- -- -- K ENOG4111813 "Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression" "Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: auxin-activated signaling pathway (GO:0009734);" PF02309.15 AUX/IAA family TRINITY_DN17737_c0_g1_i3 942.7427628 344.3497399 1541.135786 4.475495716 2.162047488 5.03E-99 1.24E-96 Up 18.33596 17.52256 20.01964 67.41252 66.65299 67.84215 XP_011083774.1 "glucan endo-1,3-beta-glucosidase, acidic-like [Sesamum indicum]" P36401|E13H_TOBAC "Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum OX=4097 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- G ENOG410YAHP glucan endo-1-3-beta-glucosidase "Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: defense response (GO:0006952);|Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);|Cellular Component: apoplast (GO:0048046);" PF00332.17 Glycosyl hydrolases family 17 TRINITY_DN17738_c0_g2_i1 10.58594054 21.17188107 0 0 #NAME? 2.83E-07 2.93E-06 Down 1.926081 2.111463 2.499319 0 0 0 PIN26749.1 hypothetical protein CDL12_00468 [Handroanthus impetiginosus] P33050|PSC13_MAIZE Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YRT5 Pollen-specific protein Cellular Component: extracellular space (GO:0005615); -- -- TRINITY_DN17738_c0_g3_i2 252.825807 499.7535472 5.898066795 0.011801951 -6.404830836 2.81E-94 6.76E-92 Down 34.63268 42.92683 34.87376 0.3688226 0.4270026 0.202769 XP_011097595.1 major pollen allergen Lol p 11-like [Sesamum indicum] O49813|OLEE1_BETPN Olee1-like protein OS=Betula pendula OX=3505 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YRT5 Pollen-specific protein Cellular Component: extracellular space (GO:0005615); PF01190.16 Pollen proteins Ole e I like TRINITY_DN17738_c0_g4_i2 14.94861574 29.51144314 0.385788347 0.0130725 -6.257321096 7.41E-09 9.49E-08 Down 2.228192 1.541271 1.724937 0 0 0.05600512 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17740_c0_g2_i1 131.4793973 203.6882894 59.27050517 0.290986317 -1.780976779 1.20E-07 1.31E-06 Down 29.60404 24.99726 20.42973 8.911697 6.060309 2.61174 PNX86396.1 "putative LRR receptor-like protein kinase, partial [Trifolium pratense]" P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN17741_c0_g1_i1 58.10759866 7.692139944 108.5230574 14.10830512 3.818472778 1.24E-20 4.22E-19 Up 0.5890164 0.01348548 1.432169 7.125915 6.968966 9.513379 PIN04991.1 Phosphatidylethanolamine binding protein [Handroanthus impetiginosus] Q93WI9|HD3A_ORYSJ Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV=1 sind:105175726 K16223 FT protein FLOWERING LOCUS T ko04712 Circadian rhythm - plant KOG3346 Phosphatidylethanolamine binding protein [R] POORLY CHARACTERIZED General function prediction only S COG1881 phosphatidylethanolamine-binding protein "Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: phosphatidylethanolamine binding (GO:0008429);|Biological Process: flower development (GO:0009908);|Biological Process: regulation of flower development (GO:0009909);|Biological Process: inflorescence development (GO:0010229);|Biological Process: cell differentiation (GO:0030154);|Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);|Biological Process: short-day photoperiodism (GO:0048572);|Biological Process: short-day photoperiodism, flowering (GO:0048575);" PF01161.19 Phosphatidylethanolamine-binding protein TRINITY_DN17741_c0_g2_i1 31.09891595 2.496717408 59.70111448 23.91184292 4.57965342 4.00E-15 9.34E-14 Up 6.01E-37 0.6988739 0.01022788 4.445262 5.232176 4.326738 PIN04991.1 Phosphatidylethanolamine binding protein [Handroanthus impetiginosus] Q8VWH2|RFT1_ORYSJ Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT1 PE=1 SV=1 sind:105175726 K16223 FT protein FLOWERING LOCUS T ko04712 Circadian rhythm - plant KOG3346 Phosphatidylethanolamine binding protein [R] POORLY CHARACTERIZED General function prediction only S COG1881 phosphatidylethanolamine-binding protein "Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum (GO:0005783);|Molecular Function: phosphatidylethanolamine binding (GO:0008429);|Biological Process: flower development (GO:0009908);|Biological Process: regulation of flower development (GO:0009909);|Biological Process: inflorescence development (GO:0010229);|Biological Process: cell differentiation (GO:0030154);|Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);|Biological Process: photoperiodism, flowering (GO:0048573);|Biological Process: short-day photoperiodism, flowering (GO:0048575);" PF01161.19 Phosphatidylethanolamine-binding protein TRINITY_DN17744_c0_g1_i1 68.64312239 44.39208473 92.89416006 2.092583861 1.06528544 0.000671986 0.003668926 Up 2.65583 1.854264 2.594968 4.250988 3.76953 4.002176 XP_020553300.1 protein DMR6-LIKE OXYGENASE 1 [Sesamum indicum] Q9ZSA7|DLO2_ARATH Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana OX=3702 GN=DLO2 PE=2 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: defense response to oomycetes (GO:0002229);|Biological Process: salicylic acid catabolic process (GO:0046244);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213); "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN17745_c0_g1_i1 32.3699915 43.35804488 21.38193812 0.493148115 -1.019907074 0.025353751 0.082153102 Down 2.022396 3.052665 2.886059 0.9440053 1.544977 0.6762999 XP_011082408.1 putative receptor-like protein kinase At1g80870 [Sesamum indicum] Q9SAH3|Y1887_ARATH Putative receptor-like protein kinase At1g80870 OS=Arabidopsis thaliana OX=3702 GN=At1g80870 PE=3 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: protein phosphorylation (GO:0006468);|Cellular Component: integral component of membrane (GO:0016021); PF00069.24 Protein kinase domain TRINITY_DN1774_c0_g1_i1 11.14216875 22.28433751 0 0 #NAME? 1.74E-07 1.86E-06 Down 5.933618 5.67766 2.867205 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17751_c0_g1_i1 34.78571158 47.03086997 22.54055318 0.479271449 -1.061085098 0.037764199 0.113270141 Down 2.526714 5.198001 4.282878 0.7676215 1.359224 2.609961 XP_022895309.1 uncharacterized protein LOC111409495 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111DME NA -- -- -- TRINITY_DN17755_c0_g4_i1 78.10490282 106.9875026 49.22230308 0.46007526 -1.120058215 0.001882761 0.009125911 Down 10.1488 9.247367 5.696525 3.309388 2.353746 3.646813 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17755_c0_g5_i1 7.135412356 14.27082471 0 0 #NAME? 0.000355696 0.002086061 Down 3.985622 2.858186 0.7513365 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17757_c0_g3_i1 14.34578391 26.85402189 1.837545922 0.068427215 -3.869285965 5.15E-06 4.39E-05 Down 3.542611 2.747773 3.445629 0.5594409 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17762_c0_g1_i8 629.3069867 369.7959427 888.8180307 2.403536459 1.265158688 1.60E-28 8.43E-27 Up 17.00442 17.28686 17.30123 33.2552 33.6354 33.14858 PIN02601.1 hypothetical protein CDL12_24885 [Handroanthus impetiginosus] Q9M0B8|WTR37_ARATH WAT1-related protein At4g30420 OS=Arabidopsis thaliana OX=3702 GN=At4g30420 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZZXZ auxin-induced protein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); PF00892.19 EamA-like transporter family TRINITY_DN17765_c1_g1_i1 6.192944363 10.91585199 1.470036737 0.134669904 -2.892500623 0.042300603 0.124096896 Down 3.668573 2.178668 0.5979248 0.6475829 0 0 XP_011102201.1 uncharacterized protein LOC105180226 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17772_c0_g2_i1 9.448701146 3.534961138 15.36244115 4.34585857 2.119641225 0.018456909 0.063437154 Up 0.5061691 0.3889072 0.3300995 1.213352 1.046936 2.138916 XP_012829969.1 "PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Erythranthe guttata]" P38418|LOX2_ARATH "Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1" sind:105163543 K00454 LOX2S lipoxygenase ko00591|ko00592 Linoleic acid metabolism|alpha-Linolenic acid metabolism -- -- -- -- -- S ENOG410YN4N "Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity)" Cellular Component: cytoplasm (GO:0005737);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to fungus (GO:0009620);|Biological Process: jasmonic acid biosynthetic process (GO:0009695);|Biological Process: response to jasmonic acid (GO:0009753);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: green leaf volatile biosynthetic process (GO:0010597);|Molecular Function: linoleate 13S-lipoxygenase activity (GO:0016165);|Biological Process: oxylipin biosynthetic process (GO:0031408);|Biological Process: lipid oxidation (GO:0034440);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: response to herbivore (GO:0080027); PF00305.18 Lipoxygenase TRINITY_DN17777_c0_g1_i1 63.97102305 111.1464859 16.79556025 0.151111932 -2.72631051 2.13E-14 4.67E-13 Down 6.424703 7.396518 6.156433 0.4761508 0.8664683 1.104609 OMO69811.1 hypothetical protein COLO4_28924 [Corchorus olitorius] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41125Y1 NHL repeat-containing protein -- -- -- TRINITY_DN1777_c0_g1_i1 9.439203594 17.06723101 1.811176178 0.106120095 -3.236230222 0.001529815 0.007609346 Down 1.490956 2.724332 1.019662 0 0.4724557 0 XP_011659856.1 PREDICTED: cell wall protein RBR3-like [Cucumis sativus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17783_c0_g1_i1 90.3555918 13.6160811 167.0951025 12.2718939 3.617286009 3.25E-30 1.84E-28 Up 0.580165 0.4831035 0.5556569 5.978336 5.134842 5.213962 EYU22201.1 hypothetical protein MIMGU_mgv1a018940mg [Erythranthe guttata] Q42716|C71A8_MENPI Cytochrome P450 71A8 OS=Mentha piperita OX=34256 GN=CYP71A8 PE=3 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN17787_c0_g1_i4 270.2288546 512.71844 27.73926923 0.054102344 -4.208165099 1.42E-93 3.38E-91 Down 13.57013 15.60024 13.44443 0.6832349 0.7031453 0.4773477 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17787_c1_g2_i2 471.1492551 310.8966464 631.4018638 2.030905998 1.022123465 9.69E-10 1.38E-08 Up 13.64428 20.90036 23.40116 29.30011 32.79403 32.84657 PIN17331.1 hypothetical protein CDL12_10014 [Handroanthus impetiginosus] Q05024|TRI1_YEAST Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1 -- -- -- -- -- -- KOG1946 RNA polymerase I transcription factor UAF [K] INFORMATION STORAGE AND PROCESSING Transcription B COG5531 "SWI SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member" Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytoplasm (GO:0005737); PF02201.17 SWIB/MDM2 domain TRINITY_DN17788_c3_g1_i1 4.76691661 9.53383322 0 0 #NAME? 0.001680378 0.00826279 Down 2.87542 2.375792 0.7679498 0 0 0 XP_012857601.1 PREDICTED: putative late blight resistance protein homolog R1A-3 isoform X2 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17793_c0_g1_i1 4396.560145 6282.146652 2510.973638 0.39969994 -1.32301074 2.71E-90 6.22E-88 Down 1046.273 1021.294 1049.24 308.2137 354.6226 342.9236 XP_022886180.1 "chlorophyll a-b binding protein 21, chloroplastic-like [Olea europaea var. sylvestris]" P27495|CB24_TOBAC "Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1" sind:105175685 K08912 LHCB1 light-harvesting complex II chlorophyll a/b binding protein 1 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- J ENOG410ZHBU Chlorophyll A-B binding protein "Cellular Component: photosystem I (GO:0009522);|Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis, light harvesting (GO:0009765);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: metal ion binding (GO:0046872);" -- -- TRINITY_DN17793_c1_g1_i1 62.82578118 99.52856317 26.1229992 0.26246736 -1.929790073 3.07E-05 0.000226936 Down 7.6668 9.400426 5.074922 2.100343 1.894517 0.6925114 KRH42317.1 hypothetical protein GLYMA_08G082900 [Glycine max] P09756|CB23_SOYBN "Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1" gmx:100805310 K08912 LHCB1 light-harvesting complex II chlorophyll a/b binding protein 1 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- J ENOG410ZHBU Chlorophyll A-B binding protein "Biological Process: response to light stimulus (GO:0009416);|Cellular Component: photosystem I (GO:0009522);|Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis, light harvesting in photosystem I (GO:0009768);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: plastoglobule (GO:0010287);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: metal ion binding (GO:0046872);" PF00504.20 Chlorophyll A-B binding protein TRINITY_DN17793_c1_g2_i1 21.18980334 37.25311658 5.126490101 0.137612382 -2.861317811 0.019970135 0.067724891 Down 3.215508 4.542206 0.6719757 0.4245826 0.4450021 0.06683517 KRH58441.1 hypothetical protein GLYMA_05G128000 [Glycine max] P09756|CB23_SOYBN "Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1" gmx:547862 K08912 LHCB1 light-harvesting complex II chlorophyll a/b binding protein 1 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- J ENOG410ZHBU Chlorophyll A-B binding protein "Biological Process: response to light stimulus (GO:0009416);|Cellular Component: photosystem I (GO:0009522);|Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis, light harvesting in photosystem I (GO:0009768);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: plastoglobule (GO:0010287);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: metal ion binding (GO:0046872);" PF00504.20 Chlorophyll A-B binding protein TRINITY_DN17793_c2_g1_i1 6.20068472 12.40136944 0 0 #NAME? 0.008606782 0.033650962 Down 2.390095 3.043667 3.52E-70 9.14E-26 9.62E-57 2.57E-46 NP_001304425.2 chlorophyll a-b binding protein of LHCII type 1 [Glycine max] P09756|CB23_SOYBN "Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1" gmx:100805310 K08912 LHCB1 light-harvesting complex II chlorophyll a/b binding protein 1 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- J ENOG410ZHBU Chlorophyll A-B binding protein "Biological Process: response to light stimulus (GO:0009416);|Cellular Component: photosystem I (GO:0009522);|Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis, light harvesting in photosystem I (GO:0009768);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: plastoglobule (GO:0010287);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: metal ion binding (GO:0046872);" PF00504.20 Chlorophyll A-B binding protein TRINITY_DN17794_c1_g2_i1 39.43331221 22.00573769 56.86088672 2.583911865 1.369556862 0.001256272 0.006391609 Up 0.4849565 6.699671 4.823593 8.73824 7.886572 8.530396 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17794_c1_g4_i1 9.152032167 18.30406433 0 0 #NAME? 0.000282581 0.001696493 Down 6.423649 3.990194 1.275761 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17801_c0_g1_i2 179.4482859 107.7821951 251.1143767 2.329831717 1.220225753 5.43E-10 7.96E-09 Up 3.723934 5.421902 4.254259 7.41258 8.554871 9.206593 PIN02019.1 Salutaridinol 7-O-acetyltransferase [Handroanthus impetiginosus] Q94FT4|SALAT_PAPSO Salutaridinol 7-O-acetyltransferase OS=Papaver somniferum OX=3469 GN=SALAT PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111CPX Transferase family Biological Process: alkaloid metabolic process (GO:0009820);|Molecular Function: salutaridinol 7-O-acetyltransferase activity (GO:0047180); PF02458.14 Transferase family TRINITY_DN17817_c0_g2_i1 37.0368194 51.26313689 22.81050191 0.444968905 -1.168223572 0.008521606 0.033352413 Down 4.493447 4.03206 2.97756 2.057653 1.475213 0.5706311 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17825_c0_g1_i2 69.06854134 21.74241058 116.3946721 5.353347168 2.420441215 1.38E-13 2.87E-12 Up 2.353183 1.738452 1.704465 8.666515 9.056408 7.480124 XP_019168018.1 PREDICTED: uncharacterized protein LOC109163767 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- J COG1670 #NAME? -- "PF13302.6,PF00583.24,PF13420.6,PF13523.5" Acetyltransferase (GNAT) domain|Acetyltransferase (GNAT) family|Acetyltransferase (GNAT) domain|Acetyltransferase (GNAT) domain TRINITY_DN17828_c0_g1_i1 78.41417886 39.28159452 117.5467632 2.992413232 1.581309415 1.14E-07 1.25E-06 Up 1.613073 1.315336 1.797894 3.830193 4.058833 3.438837 XP_011101797.1 uncharacterized protein LOC105179857 isoform X1 [Sesamum indicum] -- -- sind:105179857 K00737 MGAT3 "beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase" ko00510 N-Glycan biosynthesis -- -- -- -- -- S ENOG410YQKP Glycosyl transferase family 17 protein -- PF04724.12 Glycosyltransferase family 17 TRINITY_DN17833_c1_g1_i1 16.45693857 6.904576848 26.00930029 3.766965139 1.913402682 0.005139052 0.021688081 Up 0.2070849 1.167375 1.418041 3.707546 2.262463 2.784765 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17833_c2_g6_i1 16.18713224 27.87030114 4.50396334 0.161604402 -2.629461601 0.000503722 0.00284281 Down 7.207351 3.230582 3.895421 0.4731763 0.4796243 0.9552187 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17835_c3_g1_i3 54.07949923 88.94483847 19.21415998 0.216023328 -2.210740983 3.43E-09 4.60E-08 Down 6.60525 6.240799 6.59615 1.729675 0.9665224 0.7174074 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17835_c4_g1_i7 48.64654667 96.52151665 0.771576693 0.007993831 -6.966897209 5.41E-26 2.50E-24 Down 5.194954 3.464181 5.256777 3.03E-39 6.58E-38 0.07849741 PIN22479.1 "5'-AMP-activated protein kinase, gamma subunit [Handroanthus impetiginosus]" P85200|PRS6B_HELAN 26S proteasome regulatory subunit 6B homolog OS=Helianthus annuus OX=4232 PE=1 SV=1 -- -- -- -- -- -- KOG0727 "26S proteasome regulatory complex, ATPase RPT3" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG1222 26S protease regulatory subunit -- -- -- TRINITY_DN17836_c2_g1_i3 11.11233642 21.47664925 0.748023582 0.034829622 -4.843541361 7.23E-06 6.00E-05 Down 2.126572 2.112733 2.083568 4.76E-48 0.1135937 0.1207722 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17836_c2_g3_i1 24.73291074 49.08003314 0.385788347 0.007860393 -6.991182848 1.17E-14 2.63E-13 Down 6.332968 8.017191 4.349225 9.59E-66 1.80E-68 0.1692101 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17840_c0_g2_i1 64.50154011 37.72622543 91.27685478 2.419453675 1.274681317 0.007120616 0.028654797 Up 3.384796 1.783707 2.387374 3.380011 4.467711 6.963126 XP_011100025.1 RING-H2 finger protein ATL52-like [Sesamum indicum] Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1 -- -- -- -- -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Biological Process: response to molecule of fungal origin (GO:0002238);|Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to chitin (GO:0010200);|Biological Process: programmed cell death (GO:0012501);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: positive regulation of programmed cell death (GO:0043068);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: protein autoubiquitination (GO:0051865); "PF13639.5,PF17123.4,PF12678.6,PF13923.5,PF00097.24,PF14634.5,PF13920.5" "Ring finger domain|RING-like zinc finger|RING-H2 zinc finger domain|Zinc finger, C3HC4 type (RING finger)|Zinc finger, C3HC4 type (RING finger)|zinc-RING finger domain|Zinc finger, C3HC4 type (RING finger)" TRINITY_DN17843_c0_g1_i1 14.44397359 28.88794718 0 0 #NAME? 8.73E-10 1.25E-08 Down 2.34662 3.899237 5.075872 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17844_c0_g1_i1 6.366288868 1.968312365 10.76426537 5.468779022 2.451218768 0.047606093 0.1362365 Up 0 0 0.9081406 1.19682 1.475421 1.303894 XP_012851571.1 PREDICTED: uncharacterized protein LOC105971271 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17846_c0_g1_i1 2.390038356 0 4.780076712 Inf Inf 0.03192866 0.099242513 Up 0 0 0 1.551134 0.5176351 0.2727575 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17848_c0_g1_i1 39.5536179 79.10723581 0 0 #NAME? 3.29E-08 3.88E-07 Down 10.17233 9.322667 23.13764 0 0 6.50E-46 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17848_c0_g2_i1 245.9477722 384.8933373 107.0022071 0.278004831 -1.846818143 1.33E-25 6.01E-24 Down 25.77157 25.2242 25.17361 5.648994 5.675389 5.750281 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17848_c0_g3_i1 36.12961498 64.96178575 7.297444199 0.112334415 -3.154128113 7.69E-05 0.000523171 Down 11.14427 4.760987 12.9748 1.302243 1.313694 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17858_c0_g1_i2 66.04870243 97.39409961 34.70330526 0.356318354 -1.488761296 5.91E-06 4.99E-05 Down 3.340118 3.128423 2.813999 1.100007 1.003917 0.5604829 XP_011090860.1 sodium/hydrogen exchanger 1 [Sesamum indicum] Q56XP4|NHX2_ARATH Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=NHX2 PE=2 SV=2 -- -- -- -- -- -- KOG1965 Sodium/hydrogen exchanger protein [P] METABOLISM Inorganic ion transport and metabolism P COG0025 Sodium hydrogen exchanger Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to salt stress (GO:0009651);|Biological Process: potassium ion import (GO:0010107);|Molecular Function: sodium:proton antiporter activity (GO:0015385);|Molecular Function: potassium:proton antiporter activity (GO:0015386);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: regulation of intracellular pH (GO:0051453);|Biological Process: potassium ion homeostasis (GO:0055075);|Biological Process: potassium ion transmembrane transport (GO:0071805);|Biological Process: regulation of stomatal closure (GO:0090333);|Biological Process: sodium ion import across plasma membrane (GO:0098719); PF00999.20 Sodium/hydrogen exchanger family TRINITY_DN17859_c0_g1_i1 63.68348231 92.54625312 34.82071149 0.376251986 -1.4102289 2.29E-05 0.000173594 Down 4.151057 4.850656 3.727198 1.229481 1.518043 1.145105 XP_011095068.1 protein trichome birefringence-like 34 [Sesamum indicum] O80919|TBL34_ARATH Protein trichome birefringence-like 34 OS=Arabidopsis thaliana OX=3702 GN=TBL34 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111BYZ expressed protein Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: O-acetyltransferase activity (GO:0016413);|Biological Process: xylan biosynthetic process (GO:0045492);|Molecular Function: xylan O-acetyltransferase activity (GO:1990538); "PF13839.5,PF14416.5" GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p|PMR5 N terminal Domain TRINITY_DN17862_c0_g1_i1 24.72921034 43.9201318 5.538288875 0.126099095 -2.987370172 5.15E-07 5.16E-06 Down 3.057281 2.87142 1.984329 0.1230214 0.4914583 0.2480078 GAU32090.1 hypothetical protein TSUD_152950 [Trifolium subterraneum] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN17868_c0_g1_i1 83.46125441 28.98456207 137.9379467 4.759014347 2.250662804 3.54E-13 7.10E-12 Up 1.708166 2.15405 1.895169 6.083858 8.988024 7.046512 XP_012852361.1 PREDICTED: transcription factor MYB32-like [Erythranthe guttata] Q9LTV4|MYB10_ARATH Transcription factor MYB10 OS=Arabidopsis thaliana OX=3702 GN=MYB10 PE=2 SV=1 sind:105178614 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to absence of light (GO:0009646);|Biological Process: response to ethylene (GO:0009723);|Biological Process: response to zinc ion (GO:0010043);|Biological Process: regulation of gene expression (GO:0010468);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: response to cadmium ion (GO:0046686);|Biological Process: stress response to nickel ion (GO:1990532);|Biological Process: response to iron ion starvation (GO:1990641); "PF00249.30,PF13921.5" Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN17879_c0_g1_i3 31.46680178 42.15801104 20.77559253 0.492802958 -1.02091718 0.027104365 0.086835087 Down 3.412805 2.83746 3.424018 1.754223 0.9733339 1.081122 XP_011097176.1 uncharacterized protein LOC105176154 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111AY5 NA -- -- -- TRINITY_DN17884_c2_g1_i6 58.25783961 32.59445414 83.92122508 2.574708713 1.364409224 7.14E-05 0.000488447 Up 1.020959 1.047199 1.112182 1.995184 1.911097 2.69212 XP_011096175.2 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Sesamum indicum] Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24,PF08276.10,PF00954.19,PF11883.7" Protein tyrosine kinase|Protein kinase domain|PAN-like domain|S-locus glycoprotein domain|Domain of unknown function (DUF3403) TRINITY_DN17888_c0_g1_i2 431.5047849 250.0380027 612.9715671 2.451513612 1.293672772 1.45E-16 3.76E-15 Up 19.75409 15.40298 21.25024 32.40451 39.72449 39.6619 XP_012844334.1 PREDICTED: uncharacterized protein LOC105964353 [Erythranthe guttata] P82024|RR21_SPIOL "30S ribosomal protein S21, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps21 PE=1 SV=2" -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y838 Ribosomal protein S21 Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: rRNA binding (GO:0019843); PF01165.19 Ribosomal protein S21 TRINITY_DN1789_c0_g1_i1 5.261962017 9.437218328 1.086705707 0.115151061 -3.118400386 0.02214839 0.073584269 Down 1.21196 1.819802 2.893074 6.81E-60 0.6391942 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN178_c0_g1_i1 4.206248242 8.412496485 0 0 #NAME? 0.002973054 0.013552505 Down 0.5216816 1.75636 1.773496 0 0 0 BAI45581.1 "protein tyrosine phosphatase, receptor type, C, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG4228 Protein tyrosine phosphatase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG5599 protein tyrosine phosphatase -- PF00102.26 Protein-tyrosine phosphatase TRINITY_DN178_c0_g2_i1 2.987254107 5.974508213 0 0 #NAME? 0.018323461 0.063030983 Down 0.8971938 0.6997474 1.090205 0 0 0 AAI69207.2 "protein tyrosine phosphatase, receptor type, C isoform 1 precursor, partial [synthetic construct]" O82656|PTP1_ARATH Protein-tyrosine-phosphatase PTP1 OS=Arabidopsis thaliana OX=3702 GN=PTP1 PE=1 SV=1 -- -- -- -- -- -- KOG4228 Protein tyrosine phosphatase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG5599 protein tyrosine phosphatase Molecular Function: protein tyrosine phosphatase activity (GO:0004725);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Molecular Function: kinase binding (GO:0019900);|Biological Process: negative regulation of defense response (GO:0031348);|Molecular Function: MAP kinase tyrosine phosphatase activity (GO:0033550);|Biological Process: intracellular signal transduction (GO:0035556); PF00102.26 Protein-tyrosine phosphatase TRINITY_DN1790_c0_g1_i1 5.003981613 9.236386532 0.771576693 0.08353664 -3.581447079 0.014596866 0.052230455 Down 1.649651 2.241687 2.069254 0 0 0.3680164 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17913_c0_g1_i2 5592.55616 1793.514103 9391.598217 5.236422843 2.3885816 3.64E-288 3.37E-285 Up 93.71701 93.71241 98.26577 412.9704 403.3945 390.6483 PIN02723.1 "Glucan endo-1,3-beta-D-glucosidase [Handroanthus impetiginosus]" P36401|E13H_TOBAC "Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum OX=4097 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- G ENOG410YAHP glucan endo-1-3-beta-glucosidase "Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: defense response (GO:0006952);|Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);|Cellular Component: apoplast (GO:0048046);" PF00332.17 Glycosyl hydrolases family 17 TRINITY_DN17914_c0_g1_i3 55.10834667 80.35724086 29.85945249 0.371583844 -1.428240317 6.86E-05 0.00047157 Down 4.468722 7.427759 7.145519 2.273953 1.144388 2.266323 PIN22095.1 hypothetical protein CDL12_05185 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17914_c0_g2_i1 2072.158677 2835.007503 1309.30985 0.461836467 -1.114546 1.21E-47 1.23E-45 Down 515.3015 505.2985 523.9364 199.5173 194.6889 181.105 PIN12405.1 hypothetical protein CDL12_14981 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z1R9 NA -- -- -- TRINITY_DN17922_c0_g1_i1 76.69574805 32.78528454 120.6062116 3.678669051 1.879183891 5.11E-10 7.52E-09 Up 2.098124 2.091779 1.800903 6.361131 4.984891 6.376648 PIN16493.1 hypothetical protein CDL12_10836 [Handroanthus impetiginosus] Q9M886|LBD41_ARATH LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBK4 lob domain-containing protein "Biological Process: regulation of transcription, DNA-templated (GO:0006355);" PF03195.13 Lateral organ boundaries (LOB) domain TRINITY_DN17929_c1_g7_i3 32.71191241 65.42382483 0 0 #NAME? 5.94E-21 2.08E-19 Down 4.297245 3.905594 3.132826 1.42E-31 1.49E-14 0 XP_011097970.1 uncharacterized protein LOC105176765 [Sesamum indicum] O80883|MB101_ARATH Transcription factor MYB101 OS=Arabidopsis thaliana OX=3702 GN=MYB101 PE=2 SV=1 -- -- -- -- -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: pollen development (GO:0009555);|Biological Process: response to gibberellin (GO:0009739);|Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);|Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);|Biological Process: regulation of gene expression (GO:0010468);|Biological Process: cell differentiation (GO:0030154);|Biological Process: positive regulation of programmed cell death (GO:0043068);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: pollen sperm cell differentiation (GO:0048235);|Biological Process: regulation of pollen tube growth (GO:0080092);|Cellular Component: pollen tube (GO:0090406);|Biological Process: regulation of leaf morphogenesis (GO:1901371);|Biological Process: protein storage vacuole organization (GO:1990019);" -- -- TRINITY_DN17934_c0_g1_i1 25.83051966 3.34300964 48.31802968 14.45345209 3.853342205 1.21E-06 1.15E-05 Up 1.704802 0 0.4240189 5.398732 7.258036 12.27498 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17934_c1_g1_i1 21.26555505 35.76479686 6.766313249 0.189189198 -2.402098373 6.60E-05 0.000454691 Down 3.360508 3.118197 3.542967 0.162479 0.486697 0.8527987 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17934_c2_g3_i1 16.73542017 8.585163406 24.88567694 2.898684132 1.535398132 0.018862475 0.064596329 Up 0.3224284 0.6121168 0.5760741 1.186989 1.181938 1.202769 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17934_c2_g4_i1 303.4650478 158.8207661 448.1093296 2.821478202 1.496451204 0.009959255 0.037932578 Up 34.95547 27.17551 20.49426 93.03814 56.02809 38.5014 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17934_c2_g6_i1 13.17608414 6.306320169 20.04584811 3.178691783 1.668433135 0.020311602 0.068627061 Up 1.22368 0.4347772 0.4540227 2.381616 1.367606 1.570572 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17935_c0_g6_i1 115.7392463 65.44158542 166.0369073 2.537177334 1.343224359 2.04E-07 2.16E-06 Up 9.682734 6.937359 7.657548 16.3736 13.2729 20.19511 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17938_c3_g1_i1 455.1283622 730.4960784 179.7606459 0.246080234 -2.022799315 7.28E-10 1.05E-08 Down 59.33457 84.50534 59.32753 14.94861 7.106807 18.34313 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17938_c3_g3_i1 240.9654842 369.260635 112.6703333 0.305124139 -1.712531776 3.15E-06 2.79E-05 Down 59.23823 38.21601 42.88419 13.70679 14.71482 6.041832 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17938_c4_g1_i1 178.9765829 286.044967 71.90819886 0.251387744 -1.992013781 1.17E-10 1.86E-09 Down 34.48978 33.22158 22.63644 6.159913 5.204646 6.97483 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17938_c4_g2_i1 120.0215008 48.52542491 191.5175766 3.94674703 1.980664051 0.000498905 0.002816767 Up 10.71522 12.71569 4.739131 26.92215 19.57621 43.57894 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17938_c4_g7_i1 10.13125753 18.80302622 1.45948884 0.077619891 -3.687429788 0.000273584 0.001647712 Down 2.945503 4.627303 2.792468 0.3225386 0.3301739 7.90E-56 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17941_c1_g1_i1 5.668618931 11.33723786 0 0 #NAME? 0.000618847 0.003407899 Down 3.615874 1.010338 1.598914 0 0 0 XP_022865913.1 uncharacterized protein LOC111385730 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN17943_c1_g2_i6 194.3423824 267.3525162 121.3322487 0.453828714 -1.139780202 2.31E-09 3.16E-08 Down 11.68475 10.55792 11.06564 4.813379 3.740351 3.675006 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17943_c1_g5_i1 7.3406045 13.95673853 0.724470471 0.051908293 -4.267891148 0.019411349 0.066181414 Down 0.8685568 3.948593 1.310833 1.96E-34 0.2153602 7.18E-43 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17943_c1_g6_i1 21.26405239 30.5098046 12.01830017 0.393915999 -1.34404008 0.015082004 0.053611387 Down 2.763664 4.691986 6.394386 0.640066 1.299909 2.499393 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17943_c1_g7_i1 35.95584978 68.48671067 3.424988898 0.05000954 -4.321652854 3.21E-15 7.55E-14 Down 6.783811 6.18866 7.395062 0 0.142618 0.6490826 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17949_c0_g1_i3 72.41843178 100.9846723 43.85219129 0.434246013 -1.203415493 0.000104948 0.000692731 Down 7.782913 8.630375 6.548196 2.403248 2.862733 2.804492 XP_011085905.1 ethylene-responsive transcription factor 1B-like [Sesamum indicum] Q8VYM0|ERF93_ARATH Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1 sind:105167788 K14516 ERF1 ethylene-responsive transcription factor 1 ko04075 Plant hormone signal transduction -- -- -- -- -- -- -- -- Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: defense response (GO:0006952);|Cellular Component: chloroplast (GO:0009507);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: response to chitin (GO:0010200); -- -- TRINITY_DN17958_c0_g1_i4 49.54975661 67.20551068 31.89400255 0.474574216 -1.075294375 0.003555573 0.015800878 Down 2.966568 3.827549 3.352181 1.293858 1.40584 1.182899 XP_012837571.1 PREDICTED: F-box protein At5g07610-like [Erythranthe guttata] Q9FLS0|FB253_ARATH F-box protein At5g07610 OS=Arabidopsis thaliana OX=3702 GN=At5g07610 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17962_c0_g5_i2 14.85555621 22.35883073 7.352281686 0.328831224 -1.604580797 0.023208794 0.076404927 Down 1.103105 1.781995 1.345695 0.3992433 0.5493369 0.157536 KYP32706.1 Transposon TX1 uncharacterized [Cajanus cajan] P92555|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111K5V Reverse transcriptase (RNA-dependent DNA polymerase) Cellular Component: mitochondrion (GO:0005739); PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN17967_c0_g3_i1 978.7959335 1460.331298 497.2605684 0.340512163 -1.554221765 4.81E-56 6.17E-54 Down 55.45355 56.6703 56.58167 14.11243 16.68405 15.53807 XP_012838752.1 PREDICTED: ferruginol synthase-like [Erythranthe guttata] S4UX02|CYPH1_SALMI Ferruginol synthase OS=Salvia miltiorrhiza OX=226208 GN=CYP76AH1 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN17969_c0_g1_i1 48.61786601 87.50860883 9.727123202 0.111156186 -3.169339856 0.000126323 0.000820221 Down 23.16524 18.55752 7.840933 0.8983156 1.494164 2.211253 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17969_c1_g1_i4 75.94891609 39.38088932 112.5169429 2.857145809 1.514574663 4.57E-07 4.61E-06 Up 1.238031 0.8266214 1.105425 2.331702 2.534353 2.404121 XP_011094919.1 putative receptor protein kinase ZmPK1 isoform X1 [Sesamum indicum] P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1 OS=Zea mays OX=4577 GN=PK1 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: protein phosphorylation (GO:0006468);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: recognition of pollen (GO:0048544); "PF00069.24,PF07714.16,PF01453.23,PF00954.19" Protein kinase domain|Protein tyrosine kinase|D-mannose binding lectin|S-locus glycoprotein domain TRINITY_DN17973_c0_g1_i3 2865.164171 1884.543101 3845.785241 2.04069901 1.02906341 5.57E-48 5.72E-46 Up 91.7282 101.9353 96.14721 159.7652 163.0536 154.2699 EYU21091.1 hypothetical protein MIMGU_mgv1a018053mg [Erythranthe guttata] F2VYU4|PIK1_ORYSJ Disease resistance protein Pik-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PIK-1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z1J1 NA "Molecular Function: ATP binding (GO:0005524);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: defense response signaling pathway, resistance gene-dependent (GO:0009870);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: ADP binding (GO:0043531);" -- -- TRINITY_DN17988_c0_g1_i2 878.453415 582.4739847 1174.432845 2.016283776 1.011698701 4.13E-24 1.72E-22 Up 23.27657 23.92603 23.43893 36.33634 40.08663 38.52727 PIN17030.1 Mitochondrial phosphate carrier protein [Handroanthus impetiginosus] Q9FMU6|MPCP3_ARATH "Mitochondrial phosphate carrier protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MPT3 PE=1 SV=1" sind:105165890 K15102 "SLC25A3, PHC, PIC" "solute carrier family 25 (mitochondrial phosphate transporter), member 3" -- -- KOG0767 Mitochondrial phosphate carrier protein [C] METABOLISM Energy production and conversion S ENOG410XPST Phosphate carrier protein Molecular Function: inorganic phosphate transmembrane transporter activity (GO:0005315);|Cellular Component: cell wall (GO:0005618);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: chloroplast (GO:0009507);|Biological Process: response to salt stress (GO:0009651);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of mitochondrial inner membrane (GO:0031305);|Biological Process: phosphate ion transmembrane transport (GO:0035435); PF00153.26 Mitochondrial carrier protein TRINITY_DN17989_c0_g1_i2 47.19618147 90.37894828 4.013414651 0.044406521 -4.493084646 5.27E-20 1.72E-18 Down 2.650831 3.002634 2.994248 0.03762294 0.2614569 0.0386842 PIN22203.1 hypothetical protein CDL12_05084 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDBF NA -- -- -- TRINITY_DN1798_c0_g1_i1 11.97104209 23.94208418 0 0 #NAME? 5.28E-05 0.000372473 Down 2.197068 5.387332 1.826421 0 0 0 XP_022865898.1 sugar transport protein 8-like [Olea europaea var. sylvestris] Q9SBA7|STP8_ARATH Sugar transport protein 8 OS=Arabidopsis thaliana OX=3702 GN=STP8 PE=2 SV=2 -- -- -- -- -- -- KOG0254 Predicted transporter (major facilitator superfamily) [R] POORLY CHARACTERIZED General function prediction only G ENOG410XNQK Transporter Molecular Function: carbohydrate:proton symporter activity (GO:0005351);|Molecular Function: glucose transmembrane transporter activity (GO:0005355);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of plasma membrane (GO:0005887);|Biological Process: hexose transmembrane transport (GO:0008645);|Molecular Function: monosaccharide transmembrane transporter activity (GO:0015145);|Biological Process: monosaccharide transmembrane transport (GO:0015749);|Cellular Component: pollen tube (GO:0090406); PF00083.23 Sugar (and other) transporter TRINITY_DN17992_c0_g1_i4 281.5894638 187.5566977 375.62223 2.002712964 1.001955664 3.00E-10 4.53E-09 Up 12.05351 14.42819 12.72166 21.01502 19.97533 22.32582 XP_011094110.1 transcription factor bHLH35 [Sesamum indicum] Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YDYS Transcription factor Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Molecular Function: protein dimerization activity (GO:0046983); PF00010.25 Helix-loop-helix DNA-binding domain TRINITY_DN17993_c0_g1_i5 74.76084602 34.52724531 114.9944467 3.330542176 1.735757051 9.19E-09 1.16E-07 Up 0.4857062 1.141416 0.5311807 2.067944 1.679029 2.081447 XP_020549922.1 ABC transporter B family member 11-like [Sesamum indicum] Q9FWX7|AB11B_ARATH ABC transporter B family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCB11 PE=2 SV=1 sind:105165179 K05658 ABCB1 "ATP-binding cassette, subfamily B (MDR/TAP), member 1" ko02010 ABC transporters KOG0055 "Multidrug/pheromone exporter, ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1132 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: auxin efflux transmembrane transporter activity (GO:0010329);|Biological Process: basipetal auxin transport (GO:0010540);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);" "PF00005.26,PF00664.22,PF02463.18,PF13555.5,PF09818.8,PF13191.5,PF03193.15,PF13401.5,PF07728.13,PF06414.11,PF13304.5,PF00503.19" "ABC transporter|ABC transporter transmembrane region|RecF/RecN/SMC N terminal domain|P-loop containing region of AAA domain|Predicted ATPase of the ABC class|AAA ATPase domain|RsgA GTPase|AAA domain|AAA domain (dynein-related subfamily)|Zeta toxin|AAA domain, putative AbiEii toxin, Type IV TA system|G-protein alpha subunit" TRINITY_DN17993_c0_g2_i1 507.649495 221.1088949 794.190095 3.591850501 1.844727304 4.33E-07 4.39E-06 Up 30.09562 27.00599 40.75775 89.03923 120.113 74.42987 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17993_c0_g4_i1 11.16174171 21.16611838 1.15736504 0.05468008 -4.192840844 2.58E-05 0.000193124 Down 2.373723 1.388569 1.981981 0.02133441 2.09E-47 0.2571872 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17995_c0_g2_i1 59.20845594 80.88231742 37.53459445 0.464064281 -1.107603438 0.001177635 0.006029787 Down 9.22927 7.644937 7.219246 3.188018 2.764828 3.017019 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN17997_c0_g2_i1 15.24536544 30.1232217 0.367509184 0.012200195 -6.356951961 4.18E-09 5.55E-08 Down 1.291245 1.29364 1.538566 0.04307886 0 0 XP_012829763.1 PREDICTED: protein argonaute 2-like [Erythranthe guttata] Q9SHF3|AGO2_ARATH Protein argonaute 2 OS=Arabidopsis thaliana OX=3702 GN=AGO2 PE=1 SV=1 sot:102591245 K11593 "ELF2C, AGO" eukaryotic translation initiation factor 2C -- -- KOG1041 Translation initiation factor 2C (eIF-2C) and related proteins [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J ENOG410XP07 eukaryotic translation initiation factor 2c Molecular Function: mRNA binding (GO:0003729);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: regulation of translation (GO:0006417);|Biological Process: modulation by virus of host morphology or physiology (GO:0019048);|Biological Process: gene silencing by RNA (GO:0031047);|Molecular Function: siRNA binding (GO:0035197);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: defense response to virus (GO:0051607); PF02171.16 Piwi domain TRINITY_DN17997_c0_g3_i1 6.184076587 10.82499979 1.543153387 0.142554588 -2.810413621 0.017902879 0.061796911 Down 0.3015073 1.740392 1.874192 2.18E-73 0 0.4622477 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18007_c0_g2_i1 8.507711672 15.54538661 1.470036737 0.09456418 -3.402562382 0.001442096 0.007219705 Down 2.995181 1.772297 3.755816 0.6920668 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18007_c0_g8_i1 14.50506341 6.186619695 22.82350712 3.689172479 1.883297241 0.036828711 0.111110308 Up 3.897485 2.67E-80 1.60E-82 5.285302 4.258678 1.856334 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18012_c0_g1_i2 24.77493244 39.90113228 9.648732604 0.24181601 -2.04801833 0.000160874 0.001020763 Down 4.381816 3.232862 5.177199 0.7438161 0.9263719 0.7981391 PIN05459.1 hypothetical protein CDL12_22002 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZFRH phy rapidly regulated -- -- -- TRINITY_DN18012_c0_g2_i2 31.19677471 48.53770333 13.85584609 0.285465631 -1.808611036 0.000147039 0.000942202 Down 5.68649 4.42709 5.524734 0.9656888 0.9511438 1.754671 PIN05459.1 hypothetical protein CDL12_22002 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZFRH phy rapidly regulated -- -- -- TRINITY_DN18012_c0_g3_i1 113.1461567 151.6588357 74.6334777 0.492114273 -1.022934734 7.95E-05 0.000539325 Down 20.18535 20.3978 13.41984 7.200676 7.264476 7.014207 PIN05459.1 hypothetical protein CDL12_22002 [Handroanthus impetiginosus] Q9LXR7|PAR2_ARATH Transcription factor PAR2 OS=Arabidopsis thaliana OX=3702 GN=PAR2 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZFRH phy rapidly regulated Cellular Component: nucleus (GO:0005634);|Biological Process: circadian rhythm (GO:0007623);|Biological Process: shade avoidance (GO:0009641);|Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);|Biological Process: developmental process (GO:0032502);|Biological Process: regulation of growth (GO:0040008); -- -- TRINITY_DN18013_c0_g3_i1 22.3806505 32.76092067 12.00038033 0.366301681 -1.448895771 0.008548833 0.03343879 Down 4.412622 4.658727 5.30617 1.874339 0.3734443 1.927363 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18016_c0_g1_i9 74.7372971 108.9401742 40.53442005 0.372079633 -1.426316672 2.40E-06 2.16E-05 Down 7.64519 8.219678 8.700313 2.253097 2.47897 2.646357 XP_011095130.1 expansin-A4-like [Sesamum indicum] O22874|EXPA8_ARATH Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- G ENOG410YB3R loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found -- "PF01357.20,PF03330.17" Pollen allergen|Lytic transglycolase TRINITY_DN18022_c0_g1_i3 32.89652181 51.39551867 14.39752494 0.280131913 -1.835821751 8.00E-05 0.000542418 Down 2.689043 2.794439 3.496067 1.046115 0.6088196 0.4059208 XP_011085484.1 GDSL esterase/lipase At2g04570 [Sesamum indicum] Q9SJB4|GDL34_ARATH GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana OX=3702 GN=At2g04570 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG3240 GDSL esterase lipase "Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);" PF00657.21 GDSL-like Lipase/Acylhydrolase TRINITY_DN18024_c0_g2_i1 19.71017066 9.616085642 29.80425568 3.099416623 1.631996695 0.006133718 0.025220354 Up 0.5717041 0.2953961 0.4329939 1.113238 0.9766848 1.301207 XP_009788787.1 PREDICTED: uncharacterized protein LOC104236542 [Nicotiana sylvestris] Q9LHN9|IQM2_ARATH IQ domain-containing protein IQM2 OS=Arabidopsis thaliana OX=3702 GN=IQM2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XYNX Calmodulin-binding Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737); -- -- TRINITY_DN18029_c0_g1_i2 335.7693248 516.3273691 155.2112804 0.30060634 -1.73405266 3.37E-30 1.91E-28 Down 30.73779 34.15839 34.72644 8.48611 6.95807 8.734796 XP_011085586.1 proline-rich extensin-like protein EPR1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZD9Y Pollen Ole e 1 allergen and extensin -- PF01190.16 Pollen proteins Ole e I like TRINITY_DN18031_c1_g1_i11 86.2910906 44.98301991 127.5991613 2.836607269 1.504166422 0.001350889 0.006812675 Up 4.787728 4.309817 5.643799 11.341 15.16402 7.245545 XP_016899491.1 PREDICTED: uncharacterized protein LOC107990549 [Cucumis melo] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YIHT Retrotransposon protein -- -- -- TRINITY_DN18031_c1_g2_i4 36.9682342 51.3711548 22.56531359 0.439260392 -1.186851677 0.004585287 0.019693439 Down 2.929562 3.191719 4.711085 0.7781005 1.893388 1.138232 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18034_c0_g1_i1 3198.36537 2068.676901 4328.053838 2.092184544 1.065010112 2.89E-53 3.47E-51 Up 164.1658 163.1734 171.8833 283.5956 290.3309 268.6487 EPS74099.1 "hypothetical protein M569_00658, partial [Genlisea aurea]" P41099|RLA2_PARAR 60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1 pop:POPTR_0004s19680g K02943 "RP-LP2, RPLP2" large subunit ribosomal protein LP2 ko03010 Ribosome KOG3449 60S acidic ribosomal protein P2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2058 Ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translational elongation (GO:0006414); PF00428.18 60s Acidic ribosomal protein TRINITY_DN18037_c0_g3_i2 229.4286376 327.3298877 131.5273875 0.401819059 -1.315382099 1.73E-10 2.69E-09 Down 17.29679 19.50829 14.20481 4.47832 6.232417 5.825457 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18038_c0_g1_i1 34.47640097 56.30670106 12.64610088 0.224593177 -2.154613994 3.78E-06 3.30E-05 Down 1.844551 2.689783 2.16915 0.3229296 0.4468169 0.4572278 XP_011077043.1 premnaspirodiene oxygenase-like [Sesamum indicum] A6YIH8|C7D55_HYOMU Premnaspirodiene oxygenase OS=Hyoscyamus muticus OX=35626 GN=CYP71D55 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN18052_c0_g1_i1 39.24254885 58.49444641 19.9906513 0.341752979 -1.548974182 0.000264163 0.001597332 Down 2.884819 3.182938 2.839252 0.8646464 0.9397993 0.6843215 PIN08397.1 hypothetical protein CDL12_19025 [Handroanthus impetiginosus] Q84WP6|NAC43_ARATH NAC domain-containing protein 43 OS=Arabidopsis thaliana OX=3702 GN=NAC043 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- K ENOG41113G2 nac domain "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);|Biological Process: fruit dehiscence (GO:0010047);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);" PF02365.14 No apical meristem (NAM) protein TRINITY_DN18057_c0_g1_i2 797.3418723 1113.487871 481.1958733 0.432151877 -1.210389668 4.31E-31 2.52E-29 Down 107.3682 104.3069 109.619 36.10764 36.45011 39.59105 XP_011084606.1 uncharacterized protein LOC105166815 [Sesamum indicum] F4KFM8|LEA65_ARATH Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN=At5g17165 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZHAM seed specific protein Bn15D1B -- -- -- TRINITY_DN18058_c1_g1_i1 52.78236448 103.727183 1.837545922 0.017715182 -5.818869906 4.20E-16 1.05E-14 Down 16.15367 13.05029 8.636668 0.5186403 8.36E-67 8.53E-84 XP_012838465.1 PREDICTED: G2/mitotic-specific cyclin S13-7-like [Erythranthe guttata] P34801|CCN2_ANTMA G2/mitotic-specific cyclin-2 OS=Antirrhinum majus OX=4151 PE=2 SV=1 -- -- -- -- -- -- KOG0653 Cyclin B and related kinase-activating proteins [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D COG5024 g2 mitotic-specific Cellular Component: nucleus (GO:0005634);|Biological Process: cell cycle (GO:0007049);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN18058_c1_g2_i1 20.04928298 40.09856595 0 0 #NAME? 4.61E-13 9.15E-12 Down 5.345794 5.739164 3.503431 3.96E-42 0 0 XP_012838465.1 PREDICTED: G2/mitotic-specific cyclin S13-7-like [Erythranthe guttata] P25012|CCNB2_SOYBN G2/mitotic-specific cyclin S13-7 (Fragment) OS=Glycine max OX=3847 PE=2 SV=1 -- -- -- -- -- -- KOG0653 Cyclin B and related kinase-activating proteins [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D COG5024 g2 mitotic-specific Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);|Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: cyclin-dependent protein kinase holoenzyme complex (GO:0000307);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: regulation of mitotic nuclear division (GO:0007088);|Biological Process: positive regulation of cell proliferation (GO:0008284);|Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);|Molecular Function: protein kinase binding (GO:0019901);|Biological Process: positive regulation of cell cycle (GO:0045787);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN18058_c1_g3_i2 56.89604147 79.11072147 34.68136147 0.438390155 -1.189712694 0.023110664 0.076151451 Down 4.654436 7.632452 11.20156 3.546762 1.66793 3.066785 XP_011080495.1 G2/mitotic-specific cyclin S13-7 [Sesamum indicum] O48790|CCB14_ARATH Cyclin-B1-4 OS=Arabidopsis thaliana OX=3702 GN=CYCB1-4 PE=2 SV=1 -- -- -- -- -- -- KOG0653 Cyclin B and related kinase-activating proteins [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D COG5024 g2 mitotic-specific Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);|Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: cyclin-dependent protein kinase holoenzyme complex (GO:0000307);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: regulation of mitotic nuclear division (GO:0007088);|Biological Process: positive regulation of cell proliferation (GO:0008284);|Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);|Molecular Function: protein kinase binding (GO:0019901);|Biological Process: positive regulation of cell cycle (GO:0045787);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN18059_c0_g2_i1 99.37029053 12.83275671 185.9078244 14.4869749 3.856684464 1.73E-35 1.17E-33 Up 0.4403651 0.3538471 0.5330066 4.736766 5.148145 5.409405 AGV54793.1 hypothetical protein [Phaseolus vulgaris] Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TAR1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZCN3 NA Cellular Component: mitochondrion (GO:0005739);|Biological Process: regulation of cellular respiration (GO:0043457); -- -- TRINITY_DN18059_c0_g4_i1 18.09604747 4.996552424 31.19554251 6.24341343 2.642335002 3.54E-05 0.000258378 Up 0.872115 0.3813539 0.1481978 2.030644 2.586621 2.36536 EJK58439.1 hypothetical protein THAOC_21441 [Thalassiosira oceanica] Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TAR1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: mitochondrion (GO:0005739);|Biological Process: regulation of cellular respiration (GO:0043457); -- -- TRINITY_DN18059_c0_g5_i1 25.6371297 51.27425939 0 0 #NAME? 1.02E-16 2.69E-15 Down 5.650737 5.822243 6.404204 1.55E-63 7.43E-80 0 PHT25412.1 hypothetical protein CQW23_34958 [Capsicum baccatum] Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TAR1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y21X NA Cellular Component: mitochondrion (GO:0005739);|Biological Process: regulation of cellular respiration (GO:0043457); -- -- TRINITY_DN18059_c0_g9_i1 11.52469051 0 23.04938103 Inf Inf 0.00056052 0.003127295 Up 0 0 0 1.976071 1.996666 7.018444 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18061_c0_g4_i1 23.12222916 37.76363866 8.480819666 0.224576338 -2.154722168 0.001216569 0.006213987 Down 4.563272 9.045443 4.590673 0.8020924 1.609862 0.7606205 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18064_c0_g1_i3 35.84151655 57.17583319 14.50719991 0.253729576 -1.978636398 1.28E-05 0.000101716 Down 4.200418 2.853743 3.302759 0.7691956 0.6354568 0.7182738 KYP59064.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN18075_c0_g1_i10 125.9390301 179.9240051 71.95405507 0.399913591 -1.322239782 1.94E-08 2.36E-07 Down 4.734929 5.52598 5.13564 1.836407 1.638115 1.497184 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18078_c0_g4_i4 119.7837183 184.8381291 54.72930758 0.29609317 -1.755876883 1.18E-06 1.12E-05 Down 15.87599 9.675186 11.3604 3.122871 2.500634 3.189024 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18078_c0_g6_i1 51.18745024 72.13408561 30.24081487 0.419230584 -1.254184124 0.002164839 0.010309331 Down 13.98689 8.024754 14.24377 3.846317 5.634942 2.69838 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18078_c0_g7_i1 107.2291467 143.0030497 71.45524374 0.499676363 -1.000934122 0.04594276 0.132445046 Down 41.21372 23.70543 25.14907 18.23339 12.24516 5.600973 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18099_c0_g1_i3 430.3379606 262.4405459 598.2353752 2.279508195 1.188722596 2.28E-19 7.17E-18 Up 12.67136 14.68964 12.23056 24.16906 24.74285 23.85531 XP_011079860.1 "ribosome-recycling factor, chloroplastic [Sesamum indicum]" P37706|RRFC_DAUCA "Ribosome-recycling factor, chloroplastic (Fragment) OS=Daucus carota OX=4039 GN=RRF PE=2 SV=2" sind:105163270 K02838 "frr, MRRF, RRF" ribosome recycling factor -- -- KOG4759 Ribosome recycling factor [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0233 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another (By similarity) Biological Process: translation (GO:0006412);|Cellular Component: chloroplast (GO:0009507); PF01765.18 Ribosome recycling factor TRINITY_DN18100_c0_g3_i1 15.50306841 26.6276703 4.378466519 0.164432955 -2.604428625 0.003076739 0.013969035 Down 3.292791 7.277437 3.312522 0.8649655 0.8802894 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18115_c2_g1_i1 40.68270766 25.47664471 55.88877062 2.193725715 1.133383154 0.00536976 0.02252352 Up 0.8958312 1.047355 0.985956 1.363052 1.773677 2.055317 XP_021673528.1 uncharacterized protein LOC110659789 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- -- -- TRINITY_DN18120_c0_g1_i1 10.79419784 0.984156182 20.6042395 20.93594479 4.38791012 2.48E-05 0.000186203 Up 2.64E-89 1.18E-09 0.5757778 3.642364 1.462823 4.366634 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18129_c0_g2_i1 13.63826443 27.27652886 0 0 #NAME? 2.35E-08 2.83E-07 Down 2.100794 1.581309 3.572853 0 0 0 XP_011079324.1 uncharacterized protein LOC105162867 isoform X2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18130_c0_g1_i2 1155.18911 1624.003642 686.3745783 0.422643497 -1.242486843 2.03E-41 1.69E-39 Down 65.43764 67.16762 64.5646 22.78543 22.87023 21.56263 EEF38867.1 conserved hypothetical protein [Ricinus communis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41122DF NA -- "PF07468.10,PF03318.12" Agglutinin domain|Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 TRINITY_DN18131_c0_g4_i1 30.52824283 16.16996884 44.88651682 2.775918573 1.472965249 0.001351313 0.006814059 Up 0.9665983 1.993945 0.7363496 2.34604 3.250283 2.683476 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18131_c0_g5_i2 16.56396308 2.651220853 30.4767053 11.49534761 3.522978188 1.68E-06 1.56E-05 Up 0.2724674 0.2647091 0.2085666 2.654661 1.666614 2.00942 XP_022849226.1 F-box/LRR-repeat protein 25-like isoform X2 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18131_c0_g6_i1 19.99791486 1.275402478 38.72042724 30.35937903 4.924070377 8.59E-11 1.38E-09 Up 0.1464961 0.1425157 0 2.328074 2.859192 3.22899 EOA38943.1 hypothetical protein CARUB_v10011349mg [Capsella rubella] Q9FM89|FDL38_ARATH F-box/FBD/LRR-repeat protein At5g56420 OS=Arabidopsis thaliana OX=3702 GN=At5g56420 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG411148C FBD -- -- -- TRINITY_DN18139_c1_g1_i1 2.957328988 5.914657976 0 0 #NAME? 0.020465071 0.069037676 Down 2.042974 0.6554144 1.063549 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18156_c0_g1_i1 30.16989369 15.89072045 44.44906694 2.797171285 1.4839686 0.001809261 0.008809577 Up 0.8721131 0.2915055 0.6767949 1.767779 1.276291 1.105973 XP_011081019.1 uncharacterized protein LOC105164138 [Sesamum indicum] Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana OX=3702 GN=IQD31 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YA5M IQ calmodulin-binding motif family protein Cellular Component: cytosol (GO:0005829);|Cellular Component: microtubule associated complex (GO:0005875);|Cellular Component: plasma membrane (GO:0005886); "PF13178.5,PF00612.26" Protein of unknown function (DUF4005)|IQ calmodulin-binding motif TRINITY_DN18157_c0_g1_i1 42.29966736 69.03792078 15.56141394 0.225403862 -2.149415863 2.59E-07 2.71E-06 Down 5.989406 7.01657 5.51858 1.143321 0 2.28958 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18157_c1_g2_i11 112.9009522 69.83965433 155.96225 2.233147508 1.15907855 2.63E-06 2.35E-05 Up 3.425542 8.588067 6.374723 10.16397 11.96054 11.10619 XP_015884052.2 "LOW QUALITY PROTEIN: uncharacterized protein LOC107419736, partial [Ziziphus jujuba]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18158_c1_g1_i1 56.99817499 113.6288408 0.367509184 0.003234295 -8.27233304 1.65E-34 1.09E-32 Down 10.54761 13.21543 12.6901 0.1407497 5.62E-46 1.19E-48 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18162_c1_g1_i1 98.9526965 63.09781266 134.8075803 2.136485794 1.095239724 2.38E-05 0.000179246 Up 1.191726 0.771322 0.9883026 1.946153 1.514534 1.614796 ACN78973.1 copia-type polyprotein [Glycine max] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); "PF07727.13,PF00665.25,PF13976.5,PF14223.5" Reverse transcriptase (RNA-dependent DNA polymerase)|Integrase core domain|GAG-pre-integrase domain|gag-polypeptide of LTR copia-type TRINITY_DN18162_c2_g2_i1 111.358326 36.61373417 186.1029177 5.082871823 2.34564385 9.14E-15 2.08E-13 Up 1.99744 3.218459 3.130296 13.75874 10.744 9.772539 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18170_c1_g1_i1 16.14512102 23.01429257 9.27594947 0.403051688 -1.31096323 0.043695586 0.127341663 Down 2.526175 1.95008 3.189641 0.6280596 1.021932 0.8681496 PIM97606.1 hypothetical protein CDL12_29922 [Handroanthus impetiginosus] Q8L615|SEI3_ARATH Seipin-3 OS=Arabidopsis thaliana OX=3702 GN=SEI3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: lipid metabolic process (GO:0006629);|Biological Process: pollen germination (GO:0009846);|Biological Process: seed dormancy process (GO:0010162);|Biological Process: lipid storage (GO:0019915);|Cellular Component: integral component of endoplasmic reticulum membrane (GO:0030176);|Biological Process: lipid droplet organization (GO:0034389);|Biological Process: regulation of double fertilization forming a zygote and endosperm (GO:0080155);|Biological Process: lipid droplet formation (GO:0140042); -- -- TRINITY_DN18170_c4_g11_i1 4.959541007 0.651223126 9.267858889 14.23146464 3.83101224 0.047234977 0.135390618 Up 0.4236712 3.33E-74 1.77E-64 1.67E-07 2.556164 1.468856 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18170_c4_g1_i2 28.25045269 51.70536615 4.795539242 0.092747419 -3.43054906 2.26E-09 3.08E-08 Down 3.433756 2.711258 2.80045 0.1667311 0.3315824 0.1731118 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18170_c4_g4_i1 216.4559507 431.4524125 1.45948884 0.003382734 -8.207594455 1.27E-122 4.13E-120 Down 30.75507 33.14458 36.6599 0.1062965 0.1047827 2.36E-11 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18170_c4_g5_i1 65.53757858 131.0751572 0 0 #NAME? 1.59E-23 6.39E-22 Down 8.732986 4.935699 6.720753 0 0 2.64E-86 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18170_c5_g1_i1 10.21110187 20.42220373 0 0 #NAME? 1.05E-06 1.01E-05 Down 2.633726 4.371196 1.645713 4.43E-80 3.93E-65 3.88E-80 PWA66245.1 hypothetical protein CTI12_AA321330 [Artemisia annua] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18178_c0_g1_i2 45.82080186 71.66677427 19.97482946 0.278718132 -1.843121235 4.05E-06 3.51E-05 Down 4.991888 3.996205 3.978758 0.837422 1.261549 0.8008598 XP_020553076.1 WAT1-related protein At1g68170-like [Sesamum indicum] F4HVM3|WTR10_ARATH WAT1-related protein At1g68170 OS=Arabidopsis thaliana OX=3702 GN=At1g68170 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YFQG auxin-induced protein 5NG4-like Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); PF00892.19 EamA-like transporter family TRINITY_DN1817_c0_g1_i1 9.153061898 16.03322599 2.272897807 0.141761727 -2.818460009 0.003890032 0.017067486 Down 1.286435 1.858618 1.385317 0.0955704 0.09550505 0.4031882 XP_011095375.1 uncharacterized protein LOC105174853 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG4382 "Uncharacterized conserved protein, contains DTW domain" [S] POORLY CHARACTERIZED Function unknown S COG3148 Dtw domain containing protein -- PF03942.14 DTW domain TRINITY_DN18191_c0_g2_i3 110.8567068 70.59393844 151.1194752 2.140686276 1.09807338 0.006288677 0.025738159 Up 2.756245 13.84699 9.146607 16.29309 12.24584 15.85183 XP_012827524.1 PREDICTED: probable choline kinase 2 isoform X1 [Erythranthe guttata] Q8L518|CK2_ARATH Probable choline kinase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g74320 PE=2 SV=1 tcc:TCM_044748 K14156 CHK choline/ethanolamine kinase ko00564 Glycerophospholipid metabolism KOG2686 Choline kinase [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis M COG0510 Ethanolamine kinase Molecular Function: choline kinase activity (GO:0004103);|Molecular Function: ATP binding (GO:0005524); -- -- TRINITY_DN18198_c0_g1_i2 151.3779398 99.19706655 203.5588131 2.052064846 1.037076321 9.70E-07 9.32E-06 Up 5.596953 5.578752 5.571298 10.32751 8.416398 8.949845 XP_011084594.1 uncharacterized protein LOC105166805 isoform X2 [Sesamum indicum] Q9FLT9|HP302_ARATH Chloroplastic import inner membrane translocase subunit HP30-2 OS=Arabidopsis thaliana OX=3702 GN=HP30-2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG4111UT5 Mitochondrial import inner membrane translocase subunit Tim17 Tim22 Tim23 family protein Cellular Component: mitochondrion (GO:0005739);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: mitochondrion organization (GO:0007005);|Molecular Function: protein transmembrane transporter activity (GO:0008320);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid (GO:0009536);|Cellular Component: chloroplast inner membrane (GO:0009706);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: tRNA import into mitochondrion (GO:0016031);|Cellular Component: TIM22 mitochondrial import inner membrane insertion complex (GO:0042721);|Molecular Function: protein self-association (GO:0043621);|Biological Process: protein targeting to chloroplast (GO:0045036);|Biological Process: protein import into mitochondrial inner membrane (GO:0045039); PF02466.18 Tim17/Tim22/Tim23/Pmp24 family TRINITY_DN18200_c0_g1_i1 177.6376927 116.0100964 239.2652889 2.062452288 1.044360745 1.11E-07 1.21E-06 Up 13.30488 14.13148 14.7455 24.06151 26.21963 19.83954 PHU02230.1 hypothetical protein BC332_27481 [Capsicum chinense] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18200_c0_g2_i1 577.0622042 361.4592177 792.6651908 2.192958851 1.132878741 4.11E-22 1.53E-20 Up 34.4837 33.7316 32.20374 61.84331 57.48007 58.37902 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18206_c0_g1_i3 152.1565551 101.3453673 202.9677428 2.002733308 1.001970319 2.61E-06 2.34E-05 Up 4.03225 3.98619 4.318476 6.026762 6.339017 7.612866 PIN03863.1 Xylose isomerase [Handroanthus impetiginosus] Q9FKK7|XYLA_ARATH Xylose isomerase OS=Arabidopsis thaliana OX=3702 GN=XYLA PE=2 SV=2 sind:105155664 K01805 xylA xylose isomerase ko00040|ko00051 Pentose and glucuronate interconversions|Fructose and mannose metabolism -- -- -- -- -- G COG2115 Xylose isomerase Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: Golgi apparatus (GO:0005794);|Molecular Function: xylose isomerase activity (GO:0009045);|Biological Process: D-xylose metabolic process (GO:0042732);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN18208_c0_g1_i1 53.27023859 32.33377211 74.20670507 2.29502159 1.198507726 0.002177661 0.010357351 Up 3.129507 2.698642 2.326646 4.76527 6.71725 3.561673 XP_012836678.1 PREDICTED: receptor-like protein 12 [Erythranthe guttata] Q5MR23|9DC3_SOLPI Receptor-like protein 9DC3 OS=Solanum pimpinellifolium OX=4084 GN=9DC3 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF13855.5,PF12799.6,PF13516.5,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich repeat|Leucine Rich Repeat TRINITY_DN18209_c0_g1_i1 235.3579767 115.6842392 355.0317143 3.068972202 1.617755578 2.27E-20 7.60E-19 Up 6.065157 4.49061 4.61169 12.94127 11.73799 12.8803 XP_012857277.1 PREDICTED: zeatin O-xylosyltransferase-like [Erythranthe guttata] P56725|ZOX_PHAVU Zeatin O-xylosyltransferase OS=Phaseolus vulgaris OX=3885 GN=ZOX1 PE=2 SV=1 sind:105162555 K13495 CISZOG cis-zeatin O-glucosyltransferase ko00908 Zeatin biosynthesis KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase "Biological Process: protein glycosylation (GO:0006486);|Biological Process: cytokinin metabolic process (GO:0009690);|Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);|Molecular Function: zeatin O-beta-D-xylosyltransferase activity (GO:0050404);" PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN18211_c1_g1_i3 39.78944137 55.17848054 24.4004022 0.442208665 -1.177200801 0.00466491 0.019982612 Down 2.014041 2.418926 2.135629 0.7852682 0.9568301 0.6094527 XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=3 SV=2 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" -- -- TRINITY_DN18212_c1_g2_i1 136.6056992 54.21984415 218.9915543 4.038955805 2.01398236 3.33E-18 9.72E-17 Up 4.723245 3.239467 4.16483 13.77578 12.01966 13.51309 PIN12402.1 hypothetical protein CDL12_14978 [Handroanthus impetiginosus] Q96289|ZAT10_ARATH Zinc finger protein ZAT10 OS=Arabidopsis thaliana OX=3702 GN=ZAT10 PE=2 SV=1 -- -- -- -- -- -- KOG1721 FOG: Zn-finger [R] POORLY CHARACTERIZED General function prediction only S COG5048 Zinc finger protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to oxidative stress (GO:0006979);|Biological Process: response to cold (GO:0009409);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to high light intensity (GO:0009644);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: photoprotection (GO:0010117);|Biological Process: response to chitin (GO:0010200);|Biological Process: photosynthesis (GO:0015979);|Biological Process: multicellular organism growth (GO:0035264);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Molecular Function: metal ion binding (GO:0046872);" PF13912.5 C2H2-type zinc finger TRINITY_DN18212_c2_g4_i1 68.40833785 136.8166757 0 0 #NAME? 5.15E-43 4.51E-41 Down 7.897335 6.806837 7.248821 0 3.61E-69 7.16E-54 KZV56215.1 hypothetical protein F511_13819 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18219_c0_g1_i1 13.04443049 26.08886098 0 0 #NAME? 8.68E-09 1.10E-07 Down 5.069966 4.548736 4.849956 4.27E-15 0 3.14E-50 PIN08832.1 hypothetical protein CDL12_18589 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18219_c1_g2_i3 58.60171957 109.402441 7.800998101 0.071305521 -3.809842396 1.39E-08 1.73E-07 Down 12.92105 8.621203 18.13011 1.027286 0.5744685 0.6645209 PIN08832.1 hypothetical protein CDL12_18589 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YCVB expressed protein -- -- -- TRINITY_DN18219_c1_g5_i1 36.54284832 52.91667968 20.16901696 0.381146684 -1.391581772 0.035796789 0.108719633 Down 8.265716 7.653101 5.133762 0.1823751 4.999065 1.250869 PIN08832.1 hypothetical protein CDL12_18589 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YCVB expressed protein -- -- -- TRINITY_DN18220_c1_g1_i1 7.500591326 15.00118265 0 0 #NAME? 3.12E-05 0.000230341 Down 1.564602 2.673594 1.063571 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18221_c0_g1_i1 38.72750595 4.466588577 72.98842332 16.34097747 4.030422379 9.30E-10 1.32E-08 Up 0.1958868 0.09454852 0.2783967 2.210603 1.644819 3.26673 XP_012827408.1 PREDICTED: cannabidiolic acid synthase-like [Erythranthe guttata] Q9SVG5|BBE18_ARATH Berberine bridge enzyme-like 18 OS=Arabidopsis thaliana OX=3702 GN=At4g20820 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: FAD binding (GO:0071949); "PF01565.22,PF08031.11" FAD binding domain|Berberine and berberine like TRINITY_DN18223_c0_g2_i7 149.2228294 225.3099669 73.13569186 0.32460034 -1.623263584 1.82E-13 3.75E-12 Down 9.035242 9.269296 8.740116 3.219093 1.781011 2.10212 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18227_c2_g1_i1 26.08532483 48.4800953 3.690554373 0.076125147 -3.715483084 9.68E-10 1.37E-08 Down 6.059093 5.875829 8.612813 0.5301658 0.5276118 0.3116111 PIN12048.1 Pectinesterase [Handroanthus impetiginosus] Q3E8Z8|PME28_ARATH Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana OX=3702 GN=PME28 PE=2 SV=1 sind:105156869 K01051 E3.1.1.11 pectinesterase ko00040|ko00500 Pentose and glucuronate interconversions|Starch and sucrose metabolism -- -- -- -- -- G COG4677 pectinesterase Cellular Component: cell wall (GO:0005618);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: pectinesterase activity (GO:0030599);|Biological Process: cell wall modification (GO:0042545);|Molecular Function: aspartyl esterase activity (GO:0045330);|Biological Process: pectin catabolic process (GO:0045490);|Molecular Function: pectinesterase inhibitor activity (GO:0046910); -- -- TRINITY_DN18233_c0_g1_i1 15.95394014 8.061802832 23.84607745 2.957908789 1.564577566 0.02529467 0.081990929 Up 0.1805605 4.477549 0.1988733 3.984498 3.139343 4.396403 XP_006360117.2 PREDICTED: uncharacterized protein LOC102581809 [Solanum tuberosum] O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- PF01453.23 D-mannose binding lectin TRINITY_DN18235_c1_g1_i1 39.84996767 60.70459393 18.99534141 0.312914397 -1.676160057 6.86E-05 0.000471353 Down 14.19371 10.61845 12.41859 2.499186 3.267193 3.629903 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18242_c0_g2_i3 29.18130523 44.18881872 14.17379174 0.320755163 -1.640455609 0.002978335 0.013571125 Down 1.89845 4.496633 4.36229 1.043232 0.6499678 1.104473 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18242_c0_g3_i1 13.91616828 20.81346305 7.01887351 0.337227567 -1.568205618 0.030593879 0.095736105 Down 2.668263 1.887858 2.48593 0.7821943 0.6528958 0.4190485 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18243_c1_g1_i3 72.75995556 145.5199111 0 0 #NAME? 1.38E-24 5.88E-23 Down 7.255177 12.66383 9.169445 2.90E-49 5.95E-57 0.007651612 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18243_c1_g2_i1 275.3532017 546.2808306 4.425572742 0.008101278 -6.947634813 1.61E-143 6.66E-141 Down 39.63931 36.47936 40.22998 0.3665077 0.2475057 0.1376567 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18244_c0_g1_i2 54.47173637 24.78993522 84.15353753 3.394665488 1.763269418 4.59E-07 4.63E-06 Up 1.99844 1.869161 1.125103 3.923016 5.503619 4.242075 XP_011081132.1 uncharacterized protein LOC105164219 [Sesamum indicum] Q9LMM6|BPS1_ARATH "Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG4111ACI NA Cellular Component: plasma membrane (GO:0005886);|Cellular Component: chloroplast (GO:0009507);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: root development (GO:0048364);|Biological Process: shoot system development (GO:0048367); -- -- TRINITY_DN18245_c0_g3_i8 100.2092535 148.9252749 51.49323224 0.345765568 -1.532133885 9.31E-09 1.18E-07 Down 7.833154 5.88803 6.526637 1.512665 2.411546 1.707511 -- -- P52596|DHE3_VITVI Glutamate dehydrogenase OS=Vitis vinifera OX=29760 GN=GDH PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: glutamate dehydrogenase [NAD(P)+] activity (GO:0004353);|Biological Process: cellular amino acid metabolic process (GO:0006520); -- -- TRINITY_DN18245_c0_g4_i1 23.43660765 31.94366872 14.92954659 0.467371069 -1.097359664 0.043885356 0.12774708 Down 8.166674 5.066532 5.815124 2.075301 2.119323 3.11847 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18246_c0_g3_i4 144.0598538 93.6690263 194.4506814 2.075933626 1.053760317 1.64E-06 1.52E-05 Up 3.569968 2.887168 4.037303 6.045187 6.048427 5.5507 PIN24776.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9FF31|LRL21_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-2.1 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN18249_c1_g1_i3 7.234730872 11.88916619 2.580295555 0.217029144 -2.204039309 0.040387538 0.119558595 Down 1.579017 0.8016088 1.264479 0.3832525 0.1930197 0.1071164 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18255_c0_g1_i2 390.5512982 574.4065763 206.6960201 0.359842712 -1.474561657 2.96E-25 1.31E-23 Down 68.72573 63.64616 61.99066 18.20674 21.76161 16.30952 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18260_c0_g1_i1 27.20671975 46.19009474 8.223344773 0.178032646 -2.489786283 4.42E-06 3.81E-05 Down 3.481492 4.844207 2.770061 0.594744 0.3433002 0.7129655 XP_012848740.1 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X2 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18260_c0_g2_i1 35.79162178 71.58324356 0 0 #NAME? 4.18E-23 1.64E-21 Down 5.778891 6.175649 7.337813 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18272_c2_g1_i1 19.01217723 28.9745955 9.049758953 0.312334264 -1.67883725 0.033984982 0.10433791 Down 9.036913 3.150934 5.001082 0.8151401 0.8338057 2.567174 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18274_c0_g1_i1 10.1165715 19.86563381 0.367509184 0.018499746 -5.756350709 6.60E-06 5.51E-05 Down 2.92668 3.08299 1.428379 0.09368513 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18279_c0_g1_i1 15.32333579 0.936269028 29.71040256 31.73276235 4.987901209 1.45E-08 1.80E-07 Up 5.17E-21 0.3986139 0.008415672 4.643157 2.587705 3.180665 XP_020554197.1 berberine bridge enzyme-like 18 [Sesamum indicum] Q9SA85|BBE8_ARATH Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana OX=3702 GN=At1g30700 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: FAD binding (GO:0071949); -- -- TRINITY_DN18279_c1_g2_i1 29.4568851 7.419460004 51.49431019 6.940439083 2.795026937 5.63E-06 4.76E-05 Up 0.1050811 1.501032 0.4019654 4.938487 2.986984 2.752487 XP_011097020.1 berberine bridge enzyme-like 18 [Sesamum indicum] Q8GTB6|THCAS_CANSA Tetrahydrocannabinolic acid synthase OS=Cannabis sativa OX=3483 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: apoplast (GO:0048046);|Molecular Function: FAD binding (GO:0071949);|Molecular Function: Delta9-tetrahydrocannabinolate synthase activity (GO:0102778); PF01565.22 FAD binding domain TRINITY_DN18279_c1_g3_i4 577.5631226 282.9585767 872.1676685 3.082315718 1.624014643 8.73E-32 5.20E-30 Up 16.19028 24.87861 14.01528 43.27588 45.71184 47.97534 XP_011097020.1 berberine bridge enzyme-like 18 [Sesamum indicum] Q9SVG3|BBE21_ARATH Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana OX=3702 GN=At4g20840 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein "Cellular Component: cell wall (GO:0005618);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor (GO:0016899);|Cellular Component: apoplast (GO:0048046);|Molecular Function: FAD binding (GO:0071949);" PF01565.22 FAD binding domain TRINITY_DN18280_c0_g4_i1 1802.373509 902.5353595 2702.211658 2.994023037 1.582085322 6.37E-23 2.47E-21 Up 176.3987 186.3892 144.7582 447.7767 415.0698 361.8077 XP_011096886.1 cannabidiolic acid synthase-like [Sesamum indicum] Q9SVG5|BBE18_ARATH Berberine bridge enzyme-like 18 OS=Arabidopsis thaliana OX=3702 GN=At4g20820 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: FAD binding (GO:0071949); -- -- TRINITY_DN18282_c0_g1_i3 38.07650079 60.19967735 15.95332422 0.265006806 -1.915898682 9.48E-06 7.70E-05 Down 1.77487 2.168323 2.507455 0.2846333 0.6353601 0.4651131 XP_022850270.1 patellin-3-like [Olea europaea var. sylvestris] Q56Z59|PATL3_ARATH Patellin-3 OS=Arabidopsis thaliana OX=3702 GN=PATL3 PE=1 SV=2 -- -- -- -- -- -- KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins [I] METABOLISM Lipid transport and metabolism S ENOG410XRSQ Transfer protein Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: cell cycle (GO:0007049);|Molecular Function: lipid binding (GO:0008289);|Biological Process: cell division (GO:0051301); PF00650.19 CRAL/TRIO domain TRINITY_DN18286_c1_g3_i3 170.0589004 109.4647782 230.6530225 2.107098067 1.07525746 6.08E-08 6.92E-07 Up 10.857 11.89788 9.578034 16.70827 19.63939 18.58446 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18291_c0_g1_i2 240.4953056 160.0618918 320.9287194 2.005028903 1.003623034 3.86E-09 5.14E-08 Up 7.190064 8.434553 7.705299 11.95098 13.78274 11.99911 XP_011095933.1 "serine acetyltransferase 1, chloroplastic [Sesamum indicum]" Q42588|SAT1_ARATH "Serine acetyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SAT1 PE=1 SV=2" sind:105175246 K00640 cysE serine O-acetyltransferase ko00270|ko00920 Cysteine and methionine metabolism|Sulfur metabolism KOG4750 Serine O-acetyltransferase [E] METABOLISM Amino acid transport and metabolism E COG1045 serine acetyltransferase Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: cysteine biosynthetic process from serine (GO:0006535);|Molecular Function: serine O-acetyltransferase activity (GO:0009001);|Biological Process: response to cold (GO:0009409);|Cellular Component: chloroplast (GO:0009507);|Biological Process: cellular response to sulfate starvation (GO:0009970); "PF06426.13,PF00132.23,PF14602.5" "Serine acetyltransferase, N-terminal|Bacterial transferase hexapeptide (six repeats)|Hexapeptide repeat of succinyl-transferase" TRINITY_DN18294_c0_g2_i2 71.30912303 101.064963 41.55328305 0.41115419 -1.282248562 3.45E-05 0.000252835 Down 2.461972 2.443014 2.508605 0.8281305 0.8578807 0.7616836 XP_011087336.1 DNA annealing helicase and endonuclease ZRANB3 isoform X1 [Sesamum indicum] B5BT18|BTAF1_ARATH TATA-binding protein-associated factor BTAF1 OS=Arabidopsis thaliana OX=3702 GN=BTAF1 PE=1 SV=1 -- -- -- -- -- -- KOG1000 "Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily" [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics L COG0553 helicase Molecular Function: DNA binding (GO:0003677);|Molecular Function: helicase activity (GO:0004386);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: positive regulation of shoot apical meristem development (GO:1902185); "PF00176.22,PF00271.30,PF04851.14" "SNF2 family N-terminal domain|Helicase conserved C-terminal domain|Type III restriction enzyme, res subunit" TRINITY_DN18294_c0_g3_i1 15.94354194 8.877968506 23.00911538 2.591709507 1.373904022 0.033949013 0.104279845 Up 2.744879 1.323085 1.588044 4.402462 3.722164 3.590446 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18300_c0_g1_i1 71.19374391 20.32250605 122.0649818 6.006394164 2.586499154 7.44E-15 1.71E-13 Up 1.205707 1.319997 1.926435 6.638266 6.968005 7.930718 XP_011070248.1 expansin-like B1 [Sesamum indicum] O23547|EXLB1_ARATH Expansin-like B1 OS=Arabidopsis thaliana OX=3702 GN=EXLB1 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- G ENOG41115SZ expansin-like -- "PF01357.20,PF03330.17" Pollen allergen|Lytic transglycolase TRINITY_DN18302_c0_g1_i1 325.7524433 197.7147451 453.7901416 2.295176019 1.198604799 1.12E-15 2.72E-14 Up 14.86294 14.64129 14.18754 24.2004 28.5148 28.28078 XP_011074364.1 zinc finger protein ZAT10-like [Sesamum indicum] Q96289|ZAT10_ARATH Zinc finger protein ZAT10 OS=Arabidopsis thaliana OX=3702 GN=ZAT10 PE=2 SV=1 -- -- -- -- -- -- KOG1721 FOG: Zn-finger [R] POORLY CHARACTERIZED General function prediction only S COG5048 Zinc finger protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to oxidative stress (GO:0006979);|Biological Process: response to cold (GO:0009409);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to high light intensity (GO:0009644);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: photoprotection (GO:0010117);|Biological Process: response to chitin (GO:0010200);|Biological Process: photosynthesis (GO:0015979);|Biological Process: multicellular organism growth (GO:0035264);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Molecular Function: metal ion binding (GO:0046872);" "PF13912.5,PF13894.5,PF12171.7" C2H2-type zinc finger|C2H2-type zinc finger|Zinc-finger double-stranded RNA-binding TRINITY_DN18303_c2_g1_i1 47.96945938 12.70685584 83.23206292 6.550169762 2.711532298 1.81E-11 3.13E-10 Up 0.7238774 0.3234488 0.6319992 2.94514 2.981955 3.040895 KOM50008.1 hypothetical protein LR48_Vigan08g083500 [Vigna angularis] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN18303_c2_g2_i3 37.87388125 55.99349029 19.7542722 0.352795871 -1.503094417 0.000495031 0.002798373 Down 3.906691 4.748972 3.489539 1.615681 0.6588339 1.220714 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18303_c2_g3_i1 33.01477323 58.23136498 7.798181468 0.133917202 -2.900586804 7.20E-09 9.25E-08 Down 1.712136 2.072471 2.224275 0.1609938 0.2656336 0.2316236 XP_021692914.1 uncharacterized protein LOC110673970 isoform X1 [Hevea brasiliensis] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF00385.23 Chromo (CHRromatin Organisation MOdifier) domain TRINITY_DN18303_c2_g5_i1 8.742392172 14.89148358 2.593300769 0.174146569 -2.521626047 0.010744087 0.040359677 Down 1.626086 1.36411 1.310594 0.1875007 0.273216 0.1976182 KOM50008.1 hypothetical protein LR48_Vigan08g083500 [Vigna angularis] P0CT41|TF212_SCHPO Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN18306_c0_g1_i3 375.0600226 168.1306481 581.9893972 3.461530684 1.791410137 3.86E-35 2.60E-33 Up 12.44786 11.94105 13.40186 33.629 36.63862 35.21947 XP_011100937.1 probable WRKY transcription factor 50 [Sesamum indicum] Q8VWQ5|WRK50_ARATH Probable WRKY transcription factor 50 OS=Arabidopsis thaliana OX=3702 GN=WRKY50 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YQZM WRKY transcription factor Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: defense response to fungus (GO:0050832); PF03106.14 WRKY DNA -binding domain TRINITY_DN18310_c0_g1_i1 145.7466797 67.44915034 224.0442091 3.32167578 1.731911263 1.33E-14 2.97E-13 Up 3.389091 5.42134 6.083474 13.1763 13.29418 13.5077 AWN09489.1 ethylene-responsive transcription factor ERF1-like protein [Salvia miltiorrhiza] Q9LW50|ERF2_NICSY Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ERF2 PE=2 SV=1 sind:105160657 K09286 EREBP EREBP-like factor -- -- -- -- -- -- -- K ENOG410YJV7 Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: defense response (GO:0006952);|Biological Process: ethylene-activated signaling pathway (GO:0009873); PF00847.19 AP2 domain TRINITY_DN18313_c1_g1_i3 2018.466046 1291.820146 2745.111947 2.124995462 1.08745976 7.14E-45 6.68E-43 Up 132.2451 133.1516 135.9177 213.7609 231.3695 243.4372 XP_006439596.1 60S ribosomal protein L34 [Citrus clementina] P41098|RL34_TOBAC 60S ribosomal protein L34 OS=Nicotiana tabacum OX=4097 GN=RPL34 PE=2 SV=1 cit:102618427 K02915 "RP-L34e, RPL34" large subunit ribosomal protein L34e ko03010 Ribosome KOG1790 60s ribosomal protein L34 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2174 (ribosomal) protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF01199.17 Ribosomal protein L34e TRINITY_DN18313_c1_g5_i1 14.93152167 8.310959486 21.55208385 2.593212479 1.374740421 0.034192923 0.104809193 Up 0.6221396 0.6465353 0.1556855 0.9186045 1.039968 1.02756 EEF27698.1 conserved hypothetical protein [Ricinus communis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41115PN NA -- -- -- TRINITY_DN18317_c0_g2_i2 49.19328389 28.01660768 70.36996011 2.511723079 1.328677414 0.000406699 0.002351756 Up 2.784219 3.150924 3.674449 5.872825 6.290269 7.412691 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18324_c0_g1_i1 435.3361463 270.2794998 600.3927927 2.221377475 1.151454569 2.84E-18 8.32E-17 Up 14.83166 13.06105 14.39806 26.52353 25.64655 23.62449 PIN00948.1 Dimeric dihydrodiol dehydrogenase [Handroanthus impetiginosus] Q9SZ83|Y4967_ARATH Uncharacterized oxidoreductase At4g09670 OS=Arabidopsis thaliana OX=3702 GN=At4g09670 PE=1 SV=1 -- -- -- -- -- -- KOG2741 Dimeric dihydrodiol dehydrogenase [GQ] METABOLISM|METABOLISM "Carbohydrate transport and metabolism |Secondary metabolites biosynthesis, transport and catabolism " S COG0673 oxidoreductase Cellular Component: cytosol (GO:0005829);|Molecular Function: oxidoreductase activity (GO:0016491); PF01408.21 "Oxidoreductase family, NAD-binding Rossmann fold" TRINITY_DN18327_c0_g1_i1 53.38055745 14.34995953 92.41115538 6.439819932 2.687020349 0.000105578 0.000696179 Up 1.868266 3.667971 1.491666 6.167731 15.22837 15.59118 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18327_c0_g2_i5 3319.078716 2132.145847 4506.011584 2.113369303 1.079544895 3.23E-56 4.16E-54 Up 107.1602 117.1777 104.6169 181.1162 195.726 183.9383 OTG22836.1 putative ribosomal protein S8 [Helianthus annuus] Q9AT34|RS15A_DAUCA 40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3 mus:103991322 K02957 "RP-S15Ae, RPS15A" small subunit ribosomal protein S15Ae ko03010 Ribosome KOG1754 40S ribosomal protein S15/S22 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0096 "One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF00410.18 Ribosomal protein S8 TRINITY_DN18328_c0_g3_i1 75.57414104 28.3885476 122.7597345 4.32426964 2.112456485 1.46E-11 2.54E-10 Up 0.9895494 1.44615 1.68047 5.039466 4.967482 4.347608 XP_011076378.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X6 [Sesamum indicum] Q9C6K9|LRL11_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.1 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN18331_c0_g1_i2 102.6565598 137.0471615 68.26595801 0.498120189 -1.005434209 9.01E-05 0.000602933 Down 3.517955 5.00224 4.171075 1.757388 1.737185 1.584883 XP_011075450.1 probable auxin efflux carrier component 1b isoform X1 [Sesamum indicum] Q67UL3|PIN1C_ORYSJ Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1C PE=2 SV=1 sind:105159924 K13947 PIN auxin efflux carrier family -- -- -- -- -- -- -- S ENOG410YBI4 Auxin Efflux Carrier Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: auxin-activated signaling pathway (GO:0009734);|Biological Process: auxin polar transport (GO:0009926);|Biological Process: auxin homeostasis (GO:0010252);|Biological Process: auxin efflux (GO:0010315);|Molecular Function: auxin efflux transmembrane transporter activity (GO:0010329);|Cellular Component: integral component of membrane (GO:0016021); PF03547.17 Membrane transport protein TRINITY_DN18333_c0_g1_i2 25.6323478 15.54691059 35.71778501 2.297420109 1.200014694 0.020583382 0.069380075 Up 0.3873237 1.726194 1.046601 1.632684 2.11478 2.228874 PIN05864.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q8H1D6|RBK1_ARATH Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN18336_c0_g1_i3 61.20567704 83.93012257 38.4812315 0.458491306 -1.125033718 0.000567402 0.00316064 Down 4.235583 4.063634 4.832478 1.387425 1.376858 2.114591 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18340_c0_g1_i3 217.8726115 129.4335078 306.3117151 2.366556545 1.242789394 3.22E-12 5.95E-11 Up 8.557758 9.109312 7.710208 16.96783 15.87402 15.52419 PIN17112.1 Haloacid dehalogenase-like hydrolase [Handroanthus impetiginosus] Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC24B11.05 PE=3 SV=1 sind:105171337 K07025 K07025 putative hydrolase of the HAD superfamily -- -- KOG3109 Haloacid dehalogenase-like hydrolase [R] POORLY CHARACTERIZED General function prediction only S COG1011 Hydrolase Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: pyrimidine nucleobase metabolic process (GO:0006206);|Molecular Function: nucleotidase activity (GO:0008252);|Molecular Function: 5'-nucleotidase activity (GO:0008253);|Biological Process: nucleotide catabolic process (GO:0009166); "PF13419.5,PF00702.25,PF13242.5" Haloacid dehalogenase-like hydrolase|haloacid dehalogenase-like hydrolase|HAD-hyrolase-like TRINITY_DN18342_c0_g1_i1 278.6840879 390.7411041 166.6270717 0.426438555 -1.229590216 2.13E-14 4.67E-13 Down 19.62661 18.83447 20.22385 5.710596 6.402366 8.13295 PIN17113.1 Thermospermine synthase [Handroanthus impetiginosus] Q9S7X6|ACL5_ARATH Thermospermine synthase ACAULIS5 OS=Arabidopsis thaliana OX=3702 GN=ACL5 PE=1 SV=1 sind:105171338 K18787 ACL5 thermospermine synthase -- -- KOG1562 Spermidine synthase [E] METABOLISM Amino acid transport and metabolism E COG0421 "Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor (By similarity)" Cellular Component: cytoplasm (GO:0005737);|Biological Process: polyamine biosynthetic process (GO:0006596);|Biological Process: auxin polar transport (GO:0009926);|Biological Process: phloem or xylem histogenesis (GO:0010087);|Molecular Function: thermospermine synthase activity (GO:0010487);|Molecular Function: spermine synthase activity (GO:0016768);|Biological Process: xylem vessel member cell differentiation (GO:0048759); "PF01564.16,PF17284.1" Spermine/spermidine synthase domain|Spermidine synthase tetramerisation domain TRINITY_DN18343_c0_g1_i10 110.7604135 52.14335669 169.3774703 3.248303926 1.699686624 1.25E-11 2.20E-10 Up 2.615245 2.387441 2.345115 5.994683 6.820152 6.520108 PIN22150.1 Protein-tyrosine-phosphatase [Handroanthus impetiginosus] Q9ZVN4|DSP1_ARATH Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana OX=3702 GN=DSP1 PE=1 SV=1 sind:105178572 K18045 "SIW14, OCA3" tyrosine-protein phosphatase SIW14 -- -- KOG1572 Predicted protein tyrosine phosphatase [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms T COG2365 protein tyrosine serine phosphatase Molecular Function: protein tyrosine phosphatase activity (GO:0004725);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: phosphatase activity (GO:0016791); -- -- TRINITY_DN18345_c0_g2_i1 7.607768167 15.21553633 0 0 #NAME? 2.40E-05 0.000180695 Down 1.994881 3.224677 2.105285 1.15E-91 4.64E-83 2.96E-72 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18347_c0_g2_i1 20.31107284 5.58172492 35.04042076 6.2777047 2.650237167 1.19E-05 9.55E-05 Up 1.994219 0.4916473 0.3856035 4.209162 4.791404 6.039255 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18350_c0_g2_i1 55.31193106 14.36039863 96.26346348 6.703397724 2.744892534 1.25E-10 1.97E-09 Up 0.5497831 0.3434864 0.393709 2.636708 1.636967 2.789607 XP_020550361.1 LOW QUALITY PROTEIN: subtilisin-like protease SBT1.2 [Sesamum indicum] O64495|SBT12_ARATH Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana OX=3702 GN=SBT1.2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: external side of plasma membrane (GO:0009897);|Biological Process: stomatal complex morphogenesis (GO:0010103);|Biological Process: regulation of cell proliferation (GO:0042127);|Cellular Component: apoplast (GO:0048046); "PF00082.21,PF02225.21,PF05922.15" Subtilase family|PA domain|Peptidase inhibitor I9 TRINITY_DN18352_c0_g1_i1 11.55720678 3.926623331 19.18779023 4.886587944 2.288827456 0.00399193 0.017455514 Up 1.011778 0.9573508 0.391011 4.117268 3.733994 1.992511 KZV27664.1 hypothetical protein F511_42437 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YC9T Plant-specific domain TIGR01615 family protein -- -- -- TRINITY_DN18352_c0_g2_i1 256.026598 133.3940935 378.6591025 2.838649692 1.505204822 4.71E-19 1.45E-17 Up 8.209211 7.531178 7.922593 16.77577 18.73684 18.65432 XP_011096310.1 uncharacterized protein LOC105175543 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YC9T Plant-specific domain TIGR01615 family protein -- PF04720.11 PDDEXK-like family of unknown function TRINITY_DN18365_c0_g4_i1 5.065265547 10.13053109 0 0 #NAME? 0.032420349 0.100509283 Down 0 4.26885 1.688989 5.74E-25 1.44E-69 1.36E-08 XP_020548154.1 uncharacterized protein LOC110011709 [Sesamum indicum] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN18367_c0_g1_i1 9.567690054 17.97801507 1.15736504 0.064376687 -3.957317867 0.000212074 0.00131124 Down 2.926188 4.247993 1.905834 0 0 0.489893 XP_022866095.1 glutathione S-transferase DHAR2-like [Olea europaea var. sylvestris] Q65XA0|DHAR1_ORYSJ "Probable glutathione S-transferase DHAR1, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=DHAR1 PE=1 SV=1" -- -- -- -- -- -- KOG1422 "Intracellular Cl- channel CLIC, contains GST domain" [P] METABOLISM Inorganic ion transport and metabolism O ENOG4110FKA Chloride intracellular channel Molecular Function: glutathione transferase activity (GO:0004364);|Cellular Component: cytosol (GO:0005829);|Biological Process: ascorbate glutathione cycle (GO:0033355);|Molecular Function: glutathione dehydrogenase (ascorbate) activity (GO:0045174);|Biological Process: cellular oxidant detoxification (GO:0098869); -- -- TRINITY_DN18375_c0_g1_i1 50.42782906 74.69610061 26.15955752 0.350213161 -1.513694793 6.42E-05 0.000443354 Down 8.766028 11.58051 7.744951 3.298585 3.128512 1.385297 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18383_c0_g1_i1 170.5622755 110.1826826 230.9418684 2.095990612 1.067632255 0.02542242 0.082334468 Up 23.82409 13.28344 31.96589 32.04808 54.19574 30.5396 XP_022894339.1 subtilisin-like protease SBT1.9 [Olea europaea var. sylvestris] Q9FLI4|SBT13_ARATH Subtilisin-like protease SBT1.3 OS=Arabidopsis thaliana OX=3702 GN=SBT1.3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576); -- -- TRINITY_DN18383_c2_g1_i2 467.6136337 269.0739141 666.1533532 2.475726253 1.307851801 5.42E-24 2.24E-22 Up 10.53193 10.92003 11.50021 21.67226 22.0377 22.19062 PIN09680.1 Tripeptidyl-peptidase II [Handroanthus impetiginosus] Q9ZUF6|SBT18_ARATH Subtilisin-like protease SBT1.8 OS=Arabidopsis thaliana OX=3702 GN=SBT1.8 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506); PF00082.21 Subtilase family TRINITY_DN18383_c3_g1_i1 306.7837881 180.0830278 433.4845485 2.407137162 1.267318351 6.16E-16 1.53E-14 Up 10.21585 11.11822 13.73333 22.70195 22.83285 22.65961 XP_011074394.2 subtilisin-like protease SBT1.9 [Sesamum indicum] O65351|SBT17_ARATH Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana OX=3702 GN=SBT1.7 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: plant-type cell wall (GO:0009505);|Biological Process: seed coat development (GO:0010214);|Cellular Component: apoplast (GO:0048046);|Biological Process: mucilage metabolic process involved in seed coat development (GO:0048359);|Biological Process: mucilage extrusion from seed coat (GO:0080001); "PF00082.21,PF05922.15" Subtilase family|Peptidase inhibitor I9 TRINITY_DN18383_c3_g2_i1 170.1931911 264.4797425 75.90663965 0.287003605 -1.800859235 2.06E-17 5.67E-16 Down 20.44062 19.28868 15.60645 3.574036 5.436816 3.761152 XP_012858941.1 PREDICTED: subtilisin-like protease SBT1.7 [Erythranthe guttata] Q9LUM3|SBT15_ARATH Subtilisin-like protease SBT1.5 OS=Arabidopsis thaliana OX=3702 GN=SBT1.5 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576); PF00082.21 Subtilase family TRINITY_DN18383_c3_g3_i1 3.933944825 7.86788965 0 0 #NAME? 0.00445958 0.019222649 Down 0.663325 1.505015 1.530035 0 0 0 XP_011074393.1 subtilisin-like protease SBT1.9 [Sesamum indicum] F4HSQ2|SBT51_ARATH Subtilisin-like protease SBT5.1 OS=Arabidopsis thaliana OX=3702 GN=SBT5.1 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576); -- -- TRINITY_DN18383_c3_g5_i1 916.5221385 1597.014561 236.0297162 0.147794342 -2.758337055 2.56E-107 7.13E-105 Down 87.89336 92.8624 99.82567 13.76611 7.991189 11.71429 XP_011074393.1 subtilisin-like protease SBT1.9 [Sesamum indicum] O65351|SBT17_ARATH Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana OX=3702 GN=SBT1.7 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: plant-type cell wall (GO:0009505);|Biological Process: seed coat development (GO:0010214);|Cellular Component: apoplast (GO:0048046);|Biological Process: mucilage metabolic process involved in seed coat development (GO:0048359);|Biological Process: mucilage extrusion from seed coat (GO:0080001); PF00082.21 Subtilase family TRINITY_DN18397_c2_g1_i1 54.96256492 28.86402102 81.06110883 2.808378943 1.489737616 3.95E-05 0.000285962 Up 0.8653512 0.7268536 1.396874 2.14444 2.231644 2.387196 CDP15615.1 unnamed protein product [Coffea canephora] Q9C637|RLP6_ARATH Receptor-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=RLP6 PE=3 SV=1 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021); "PF13855.5,PF12799.6,PF00560.32,PF14580.5" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine-rich repeat TRINITY_DN18397_c2_g3_i1 30.79577934 42.60640586 18.98515283 0.44559386 -1.166198743 0.012247121 0.045086071 Down 2.032453 3.236707 2.854469 1.153946 0.7114871 1.005852 KJB61577.1 hypothetical protein B456_009G367600 [Gossypium raimondii] Q9SRL7|RLP35_ARATH Receptor-like protein 35 OS=Arabidopsis thaliana OX=3702 GN=RLP35 PE=3 SV=1 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN183_c0_g1_i1 10.79501572 16.64544226 4.944589174 0.297053638 -1.751204639 0.034075702 0.104541655 Down 2.483144 2.413617 2.186399 0 0.4218387 1.282654 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18405_c0_g1_i1 21.37320088 32.4519486 10.29445316 0.317221418 -1.656437912 0.009505606 0.036551288 Down 3.013227 1.438141 2.782404 0.1397371 1.295711 0.4460691 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18405_c1_g4_i1 17.80205972 30.34685856 5.257260871 0.173239047 -2.52916395 0.000152249 0.000971877 Down 1.855728 2.548507 2.253678 0.2775863 0.1653449 0.5008497 XP_011072735.1 60S ribosomal protein L7-4 isoform X1 [Sesamum indicum] Q9LHP1|RL74_ARATH 60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1 sind:105157910 K02937 "RP-L7e, RPL7" large subunit ribosomal protein L7e ko03010 Ribosome KOG3184 60S ribosomal protein L7 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1841 ribosomal large subunit biogenesis "Biological Process: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000463);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: polysomal ribosome (GO:0042788);" -- -- TRINITY_DN18406_c0_g2_i1 9.683894585 17.91884823 1.448940942 0.080861277 -3.62840721 0.020188931 0.068309195 Down 0.558078 5.425561 3.442032 0 0.6004924 8.78E-44 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1840_c0_g1_i1 115.0819456 222.4156326 7.748258613 0.034836844 -4.843242275 1.15E-49 1.24E-47 Down 21.22251 26.64382 26.63803 0 1.460285 0.6748677 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18412_c0_g3_i1 15.43362024 4.573204868 26.29403562 5.749586204 2.52345813 0.003385757 0.015158266 Up 1.152448 0 0.8914252 2.155735 2.115703 4.941135 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18420_c0_g1_i11 33.89115486 52.19367806 15.58863167 0.298668962 -1.743380774 0.022876599 0.075561193 Down 4.374812 1.517769 2.257998 0.59083 0.712439 0.6278829 CAN71748.1 hypothetical protein VITISV_019194 [Vitis vinifera] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN18421_c0_g2_i5 16.92714806 26.80413823 7.050157886 0.263024979 -1.92672828 0.005358995 0.022490835 Down 1.733158 4.984427 3.975231 0.5846999 0.8738561 0.7227887 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18422_c0_g1_i3 52.23185294 89.93295285 14.53075303 0.161573178 -2.629740369 2.28E-11 3.90E-10 Down 7.133043 5.504791 5.193202 0.8445641 0.6462296 0.8565179 PIN20534.1 Xyloglucan:xyloglucosyl transferase [Handroanthus impetiginosus] P35694|XTH2_SOYBN Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine max OX=3847 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- G COG2273 hydrolase family 16 "Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);|Cellular Component: cell wall (GO:0005618);|Biological Process: xyloglucan metabolic process (GO:0010411);|Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762);|Biological Process: cell wall biogenesis (GO:0042546);|Cellular Component: apoplast (GO:0048046);" "PF00722.20,PF06955.11" Glycosyl hydrolases family 16|Xyloglucan endo-transglycosylase (XET) C-terminus TRINITY_DN18434_c0_g1_i4 55.00750274 77.65436667 32.36063881 0.416726582 -1.262826965 0.000322641 0.001911467 Down 7.863788 7.713826 7.943564 1.981798 3.027196 2.937644 XP_012840329.1 PREDICTED: uncharacterized protein LOC105960679 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18436_c0_g1_i1 57.01456607 76.99317697 37.03595518 0.481029055 -1.055804056 0.00235441 0.011073849 Down 7.407615 4.559088 5.738594 1.964001 2.836993 2.051063 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18446_c0_g1_i2 124.8168464 73.65281241 175.9808804 2.389330083 1.256606174 8.03E-08 8.97E-07 Up 4.191901 4.493944 4.310243 8.149218 7.900001 9.0325 XP_011069390.1 stem-specific protein TSJT1-like [Sesamum indicum] P24805|TSJT1_TOBAC Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YD56 Stem-specific protein -- PF12481.7 Aluminium induced protein TRINITY_DN18452_c0_g1_i1 181.1076564 250.0050917 112.210221 0.448831743 -1.155753383 3.17E-08 3.76E-07 Down 5.746406 6.868166 6.807646 2.826235 2.685252 1.491451 XP_012833230.1 PREDICTED: uncharacterized protein LOC105954105 isoform X2 [Erythranthe guttata] -- -- -- -- -- -- -- -- KOG0504 FOG: Ankyrin repeat [R] POORLY CHARACTERIZED General function prediction only S COG0666 Ankyrin Repeat -- "PF13962.5,PF12796.6,PF13606.5,PF13857.5,PF00023.29,PF13637.5" Domain of unknown function|Ankyrin repeats (3 copies)|Ankyrin repeat|Ankyrin repeats (many copies)|Ankyrin repeat|Ankyrin repeats (many copies) TRINITY_DN18452_c0_g3_i1 49.78792889 19.86367213 79.71218566 4.012963219 2.004667933 0.000451777 0.002579884 Up 0.8804855 0.5991072 0.85042 1.625581 2.323635 3.641746 XP_012833230.1 PREDICTED: uncharacterized protein LOC105954105 isoform X2 [Erythranthe guttata] -- -- -- -- -- -- -- -- KOG0504 FOG: Ankyrin repeat [R] POORLY CHARACTERIZED General function prediction only S COG0666 Ankyrin Repeat -- "PF13962.5,PF12796.6" Domain of unknown function|Ankyrin repeats (3 copies) TRINITY_DN18459_c0_g3_i2 102.6092995 63.79800921 141.4205898 2.216692833 1.14840887 7.81E-06 6.45E-05 Up 1.972709 2.468407 2.357778 3.326008 4.781574 4.083246 XP_011096441.1 aureusidin synthase [Sesamum indicum] P43309|PPO_MALDO "Polyphenol oxidase, chloroplastic OS=Malus domestica OX=3750 PE=2 SV=1" sind:105175637 K00422 E1.10.3.1 polyphenol oxidase ko00950|ko00350 Isoquinoline alkaloid biosynthesis|Tyrosine metabolism -- -- -- -- -- S ENOG410XSH6 polyphenol oxidase Molecular Function: catechol oxidase activity (GO:0004097);|Cellular Component: chloroplast thylakoid lumen (GO:0009543);|Biological Process: pigment biosynthetic process (GO:0046148);|Molecular Function: metal ion binding (GO:0046872); "PF12143.7,PF00264.19,PF12142.7" Protein of unknown function (DUF_B2219)|Common central domain of tyrosinase|Polyphenol oxidase middle domain TRINITY_DN18463_c0_g1_i1 27.07187719 38.90189541 15.24185897 0.391802477 -1.351801578 0.006750156 0.027397161 Down 2.077345 2.14678 2.620682 0.372617 0.9713067 0.8041574 XP_011085124.2 uncharacterized protein LOC105167199 [Sesamum indicum] Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YN97 "Myb-like DNA-binding domain, SHAQKYF class family protein, expressed" "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);" PF00249.30 Myb-like DNA-binding domain TRINITY_DN18476_c0_g1_i3 52.10806311 33.2862081 70.92991812 2.130910132 1.091469751 0.002035174 0.009784224 Up 1.366545 3.392425 1.925027 3.953687 3.777342 3.719004 PIN04295.1 hypothetical protein CDL12_23166 [Handroanthus impetiginosus] Q681X4|ZAT5_ARATH Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1 -- -- -- -- -- -- KOG1721 FOG: Zn-finger [R] POORLY CHARACTERIZED General function prediction only S COG5048 Zinc finger protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: metal ion binding (GO:0046872);" "PF13912.5,PF13894.5" C2H2-type zinc finger|C2H2-type zinc finger TRINITY_DN18480_c0_g1_i2 49.13633957 72.58132451 25.69135464 0.353966462 -1.498315422 6.27E-05 0.000434128 Down 2.007937 2.706808 2.403255 0.7253414 0.5764552 0.7437555 XP_011098621.1 uncharacterized protein LOC105177245 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YEEE Protein of unknown function (DUF1666) -- PF07891.11 Protein of unknown function (DUF1666) TRINITY_DN18483_c1_g3_i1 326.0906045 530.4099011 121.7713079 0.229579628 -2.122933465 1.06E-20 3.63E-19 Down 24.05159 18.95184 18.32658 3.952876 3.23158 4.196849 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18483_c1_g4_i2 12.07920759 19.75393823 4.404476946 0.22296703 -2.165097697 0.007129433 0.028687736 Down 1.103401 3.093852 2.335006 0.1606519 0.7966665 0.1617469 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18483_c1_g7_i1 21.07588791 42.15177582 0 0 #NAME? 1.52E-10 2.38E-09 Down 5.502256 12.71684 9.009388 0 0 1.26E-44 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18487_c0_g1_i2 387.3549206 765.0326408 9.677200347 0.012649395 -6.304787762 4.77E-185 3.05E-182 Down 24.78175 24.54057 25.0157 1.75E-59 0.4274604 0.3437891 CDP03495.1 unnamed protein product [Coffea canephora] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG410YEFW Pfam:hATC Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); "PF05699.13,PF14372.5" hAT family C-terminal dimerisation region|Domain of unknown function (DUF4413) TRINITY_DN18488_c0_g2_i1 59.63794776 94.94610994 24.32978557 0.256248366 -1.964385287 2.93E-05 0.000217464 Down 14.65989 12.39296 9.785033 1.355444 0.6666184 5.666395 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18490_c0_g1_i1 31.93235129 53.50941936 10.35528323 0.193522624 -2.369425861 0.000153615 0.000979497 Down 3.808365 8.63997 7.177433 1.970163 0.5531712 0.5580712 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18492_c1_g1_i4 517.5132045 263.11573 771.9106789 2.933730639 1.552736416 9.44E-36 6.50E-34 Up 12.81504 13.70144 12.16548 28.48234 30.759 32.44956 PIM99310.1 Mitochondrial ADP/ATP carrier protein [Handroanthus impetiginosus] O22342|ADT1_GOSHI "ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum OX=3635 GN=ANT1 PE=2 SV=1" -- -- -- -- -- -- KOG0749 Mitochondrial ADP/ATP carrier proteins [C] METABOLISM Energy production and conversion U ENOG410XNW0 transmembrane transport Cellular Component: mitochondrial inner membrane (GO:0005743);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); PF00153.26 Mitochondrial carrier protein TRINITY_DN18499_c0_g1_i3 118.1750542 231.0404674 5.309641042 0.022981433 -5.443387425 3.00E-56 3.88E-54 Down 5.447125 4.18217 4.689929 0.09905548 0 0.1716948 XP_024163298.1 uncharacterized protein LOC112170290 [Rosa chinensis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41114NJ Pfam:MuDR -- "PF10551.8,PF00872.17" "MULE transposase domain|Transposase, Mutator family" TRINITY_DN18502_c0_g1_i1 25.87184003 35.74043299 16.00324708 0.4477631 -1.159192453 0.020720845 0.069708834 Down 2.002093 1.855898 2.763839 0.7807259 0.7748892 0.8986157 PIN26042.1 hypothetical protein CDL12_01210 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHXU NA -- -- -- TRINITY_DN18504_c1_g2_i5 40.91625433 56.89726819 24.93524048 0.438250223 -1.19017327 0.004389635 0.018967986 Down 4.672701 2.776309 5.678219 1.275878 1.601919 1.76164 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18504_c1_g3_i1 8.782973599 17.5659472 0 0 #NAME? 0.001282814 0.00650987 Down 6.337839 3.962424 0.8228775 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18504_c1_g5_i5 37.7632833 63.13794061 12.38862599 0.196215237 -2.349491016 1.50E-07 1.61E-06 Down 4.357295 3.441046 4.371601 0.6014597 0.3588639 0.9850091 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18504_c1_g6_i1 10.62508765 21.2501753 0 0 #NAME? 0.012214078 0.044980825 Down 4.10E-48 3.726683 9.100416 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18505_c0_g2_i1 14.29942685 6.319842056 22.27901164 3.525248169 1.817724823 0.008750499 0.034089547 Up 1.964034 0.4731869 0.7484106 2.100589 3.697676 3.164797 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18507_c1_g1_i2 149.2595368 50.10587609 248.4131976 4.957765774 2.309690114 8.46E-25 3.64E-23 Up 1.819334 2.455465 1.7304 8.873959 6.910087 8.218129 AJQ20626.1 Ketoacyl-ACP Synthase I [Salvia miltiorrhiza] P52410|KASC1_ARATH "3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KAS1 PE=1 SV=2" sind:105165117 K09458 fabF 3-oxoacyl-[acyl-carrier-protein] synthase II ko00061|ko00780 Fatty acid biosynthesis|Biotin metabolism KOG1394 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [IQ] METABOLISM|METABOLISM "Lipid transport and metabolism |Secondary metabolites biosynthesis, transport and catabolism " I COG0304 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (By similarity) Molecular Function: 3-oxoacyl-[acyl-carrier-protein] synthase activity (GO:0004315);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Cellular Component: chloroplast stroma (GO:0009570); "PF00109.25,PF02801.21" "Beta-ketoacyl synthase, N-terminal domain|Beta-ketoacyl synthase, C-terminal domain" TRINITY_DN18511_c1_g1_i10 62.64317333 84.53958929 40.74675736 0.481984331 -1.05294185 0.041575717 0.122381591 Down 1.737445 3.831632 2.320451 1.191051 0.5877751 1.310596 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18511_c1_g3_i2 9.183078386 18.36615677 0 0 #NAME? 2.22E-06 2.01E-05 Down 1.559567 2.761794 2.461672 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18511_c2_g3_i1 4.703747325 9.407494649 0 0 #NAME? 0.001625319 0.008022847 Down 0.9269196 2.400511 1.169682 1.18E-62 0 2.17E-31 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18513_c0_g3_i3 13.56102074 20.52305733 6.598984155 0.321540015 -1.636929808 0.043890888 0.127749643 Down 3.086521 2.480469 0.9303993 0.5810275 0.9439399 0.2003162 XP_024196259.1 uncharacterized protein LOC112199474 [Rosa chinensis] Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=3 SV=2 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN18528_c7_g1_i2 54.61473527 96.50216243 12.72730811 0.131886248 -2.922633956 7.19E-14 1.52E-12 Down 12.31751 16.16464 14.04613 1.438552 0.9751128 2.099129 PWA98560.1 "transposase, Ptta/En/Spm [Artemisia annua]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18543_c0_g2_i1 53.74857462 107.4971492 0 0 #NAME? 4.70E-34 3.08E-32 Down 4.663113 6.545814 5.236232 6.11E-44 5.99E-40 0 XP_011074559.1 "glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic-like [Sesamum indicum]" P55242|GLGL2_SOLTU "Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 GN=AGPS2 PE=2 SV=1" sind:105159253 K00975 glgC glucose-1-phosphate adenylyltransferase ko00520|ko00500 Amino sugar and nucleotide sugar metabolism|Starch and sucrose metabolism -- -- -- -- -- G COG0448 "Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans (By similarity)" Molecular Function: ATP binding (GO:0005524);|Biological Process: glycogen biosynthetic process (GO:0005978);|Molecular Function: glucose-1-phosphate adenylyltransferase activity (GO:0008878);|Cellular Component: amyloplast (GO:0009501);|Cellular Component: chloroplast (GO:0009507);|Biological Process: starch biosynthetic process (GO:0019252); -- -- TRINITY_DN18543_c0_g3_i1 7.588264739 15.17652948 0 0 #NAME? 2.44E-05 0.0001834 Down 2.932409 3.329823 2.816361 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18555_c1_g3_i1 22.55178451 41.00894713 4.094621882 0.099847037 -3.324136567 1.68E-07 1.80E-06 Down 2.685664 1.616746 2.177641 0.1503669 0.2007891 0.1755767 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18555_c1_g5_i2 2.521440387 5.042880774 0 0 #NAME? 0.038496364 0.115040517 Down 0.9404845 1.404885 0.734014 0 0 0 PNX89581.1 retrotransposon protein putative Ty1-copia sub-class [Trifolium pratense] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18555_c1_g6_i2 11.20481992 19.4959361 2.913703731 0.149451851 -2.742247333 0.001743252 0.008531689 Down 2.663508 4.565303 4.063297 0.450728 0.880858 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18557_c0_g2_i3 404.5838767 241.8985542 567.2691992 2.345070648 1.229631386 4.19E-19 1.29E-17 Up 17.73121 15.33514 19.21307 34.02137 33.20146 31.79034 PIN16404.1 Enoyl-CoA hydratase/isomerase [Handroanthus impetiginosus] O23299|ECI2_ARATH "Enoyl-CoA delta isomerase 2, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=ECI2 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410YFAM Enoyl-CoA hydratase Molecular Function: dodecenoyl-CoA delta-isomerase activity (GO:0004165);|Molecular Function: enoyl-CoA hydratase activity (GO:0004300);|Cellular Component: peroxisome (GO:0005777);|Biological Process: fatty acid beta-oxidation (GO:0006635);|Biological Process: fatty acid catabolic process (GO:0009062);|Biological Process: root hair elongation (GO:0048767);|Biological Process: indolebutyric acid metabolic process (GO:0080024);|Biological Process: response to indolebutyric acid (GO:0080026); PF00378.19 Enoyl-CoA hydratase/isomerase TRINITY_DN18558_c1_g1_i1 24.77404756 48.82362464 0.724470471 0.014838523 -6.074508706 1.45E-07 1.57E-06 Down 7.130893 3.013447 3.953901 0.00168049 0.1278755 3.05E-13 KZV39766.1 MLO-like protein 6-like [Dorcoceras hygrometricum] O80961|MLO12_ARATH MLO-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=MLO12 PE=2 SV=2 spen:107004144 K08472 MLO mlo protein -- -- -- -- -- -- -- -- -- -- "Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Biological Process: defense response to fungus, incompatible interaction (GO:0009817);|Biological Process: leaf senescence (GO:0010150);|Cellular Component: integral component of membrane (GO:0016021);" -- -- TRINITY_DN18558_c1_g2_i12 79.73258878 119.3843886 40.080789 0.335728896 -1.57463138 9.65E-08 1.07E-06 Down 8.520605 7.312643 9.182706 2.420118 2.276808 2.136743 NP_001333757.1 ribosomal protein S10p/S20e family protein [Solanum lycopersicum] P49200|RS201_ARATH 40S ribosomal protein S20-1 OS=Arabidopsis thaliana OX=3702 GN=RPS20A PE=2 SV=2 sly:101245205 K02969 "RP-S20e, RPS20" small subunit ribosomal protein S20e ko03010 Ribosome KOG0900 40S ribosomal protein S20 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0051 tRNA binding Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cell wall (GO:0005618);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); -- -- TRINITY_DN18558_c1_g4_i1 20.35392158 27.92815487 12.77968828 0.457591572 -1.127867615 0.047749863 0.136561839 Down 3.034179 4.649655 4.174396 1.473917 0.6371307 2.279228 XP_012827910.1 "PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like [Erythranthe guttata]" Q9LIS2|RBG4_ARATH "Glycine-rich RNA-binding protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG4 PE=2 SV=1" -- -- -- -- -- -- KOG0118 FOG: RRM domain [R] POORLY CHARACTERIZED General function prediction only S ENOG410YZ37 "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" Molecular Function: double-stranded DNA binding (GO:0003690);|Molecular Function: single-stranded DNA binding (GO:0003697);|Molecular Function: RNA binding (GO:0003723);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to cold (GO:0009409);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to salt stress (GO:0009651);|Biological Process: mitochondrial mRNA modification (GO:0080156);|Biological Process: mitochondrial RNA modification (GO:1900864);|Cellular Component: ribonucleoprotein complex (GO:1990904); PF00076.21 "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" TRINITY_DN18558_c1_g5_i1 42.11244468 84.22488936 0 0 #NAME? 7.38E-27 3.57E-25 Down 15.45846 14.58795 13.93567 1.09E-24 0 2.68E-25 PPD92439.1 hypothetical protein GOBAR_DD10595 [Gossypium barbadense] Q9STY6|RS202_ARATH 40S ribosomal protein S20-2 OS=Arabidopsis thaliana OX=3702 GN=RPS20B PE=2 SV=1 gmx:100803623 K02969 "RP-S20e, RPS20" small subunit ribosomal protein S20e ko03010 Ribosome KOG0900 40S ribosomal protein S20 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0051 tRNA binding Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cell wall (GO:0005618);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Cellular Component: polysomal ribosome (GO:0042788); -- -- TRINITY_DN18558_c1_g6_i1 13.37834439 26.75668878 0 0 #NAME? 5.97E-09 7.74E-08 Down 5.178499 7.090113 4.607541 1.01E-37 0 1.14E-51 XP_022766152.1 MLO-like protein 6 isoform X1 [Durio zibethinus] P49200|RS201_ARATH 40S ribosomal protein S20-1 OS=Arabidopsis thaliana OX=3702 GN=RPS20A PE=2 SV=2 vvi:100233065 K08472 MLO mlo protein -- -- KOG0900 40S ribosomal protein S20 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " D ENOG410ZUVB May be involved in modulation of pathogen defense and leaf cell death (By similarity) Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cell wall (GO:0005618);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); -- -- TRINITY_DN18558_c1_g7_i1 947.8501714 614.5483888 1281.151954 2.084704764 1.059843084 1.63E-20 5.51E-19 Up 94.81996 90.1778 105.0527 144.9714 167.669 175.8088 XP_016717230.1 PREDICTED: 40S ribosomal protein S20-2-like isoform X1 [Gossypium hirsutum] Q9STY6|RS202_ARATH 40S ribosomal protein S20-2 OS=Arabidopsis thaliana OX=3702 GN=RPS20B PE=2 SV=1 gra:105800097 K02969 "RP-S20e, RPS20" small subunit ribosomal protein S20e ko03010 Ribosome KOG0900 40S ribosomal protein S20 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0051 tRNA binding Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cell wall (GO:0005618);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Cellular Component: polysomal ribosome (GO:0042788); -- -- TRINITY_DN18559_c0_g1_i2 13.45092859 21.3294673 5.572389884 0.26125312 -1.936479827 0.009530413 0.036615663 Down 0.8386824 1.37934 1.158824 0.1977714 0.2956464 0.2708977 XP_011084641.1 uncharacterized protein LOC105166848 isoform X2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZF20 NA -- -- -- TRINITY_DN18567_c1_g1_i2 19.18436881 37.98294927 0.385788347 0.010156882 -6.621398556 4.42E-08 5.12E-07 Down 3.208101 3.433941 6.610449 2.33E-26 0 0.1457735 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18567_c1_g2_i3 42.3367279 56.74048772 27.93296807 0.492293408 -1.022409674 0.010326711 0.039089425 Down 6.188168 6.684795 6.077706 2.819246 1.902614 2.779381 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18567_c1_g4_i2 22.33916652 40.87528707 3.80304598 0.093040227 -3.426001576 8.62E-08 9.59E-07 Down 5.420392 4.130405 4.956271 0.3602389 0 0.7607843 XP_011098586.1 plant cysteine oxidase 2 isoform X3 [Sesamum indicum] -- -- sind:105177220 K10712 ADO cysteamine dioxygenase ko00430 Taurine and hypotaurine metabolism -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18568_c0_g2_i1 15.50655611 28.05757622 2.955536004 0.105338251 -3.246898685 2.70E-05 0.000201639 Down 2.164247 3.64349 1.985116 0.1513714 0.2974719 0.1559594 XP_012856181.1 PREDICTED: putative late blight resistance protein homolog R1A-10 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18568_c0_g3_i1 11.21038648 1.46891278 20.95186019 14.26351549 3.834257698 9.70E-05 0.000644651 Up 0.1486977 8.30E-41 0.08711214 0.9851245 1.152462 0.390564 XP_022860306.1 uncharacterized protein LOC111380876 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN18568_c0_g4_i1 7.702822002 0.976834689 14.42880932 14.77098375 3.884694008 0.000537531 0.003010874 Up 0.316884 3.51E-33 1.77E-55 1.423882 1.051464 0.8227959 XP_020270890.1 uncharacterized protein LOC109846078 [Asparagus officinalis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN18568_c0_g6_i1 12.47167209 21.25033249 3.693011689 0.173786066 -2.52461568 0.00209822 0.010038419 Down 4.468143 3.332848 3.033131 0 0.9610605 0.5097426 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1856_c0_g1_i1 3.134016647 0 6.268033295 Inf Inf 0.009497028 0.036524492 Up 0 0 0 0.4334938 1.290426 0.5037222 XP_008362959.1 PREDICTED: NADP-dependent malic enzyme [Malus domestica] P34105|MAOX_POPTR NADP-dependent malic enzyme OS=Populus trichocarpa OX=3694 PE=2 SV=3 pxb:103943899 K00029 "E1.1.1.40, maeB" malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) ko00710|ko00620 Carbon fixation in photosynthetic organisms|Pyruvate metabolism KOG1257 NADP+-dependent malic enzyme [C] METABOLISM Energy production and conversion C COG0281 malic enzyme Molecular Function: malate dehydrogenase (decarboxylating) (NAD+) activity (GO:0004471);|Molecular Function: malate dehydrogenase (decarboxylating) (NADP+) activity (GO:0004473);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: oxaloacetate decarboxylase activity (GO:0008948);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: NAD binding (GO:0051287); -- -- TRINITY_DN18570_c0_g1_i2 121.2927606 188.3179352 54.26758595 0.288170035 -1.79500777 1.68E-13 3.46E-12 Down 7.108573 7.687158 8.448291 1.89123 1.668463 1.831793 XP_011097210.1 anthocyanidin 3-O-glucosyltransferase 5-like [Sesamum indicum] Q40287|UFOG5_MANES Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot esculenta OX=3983 GN=GT5 PE=2 SV=1 sind:105176179 K12356 UGT72E coniferyl-alcohol glucosyltransferase ko00940 Phenylpropanoid biosynthesis KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);|Molecular Function: anthocyanidin 3-O-glucosyltransferase activity (GO:0047213); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN18577_c2_g2_i1 4.815575175 8.896131982 0.735018369 0.082622242 -3.597325982 0.020941113 0.070314367 Down 1.263718 1.0407 0.3746368 0.1431643 0 0 PRQ36160.1 putative transcription factor interactor and regulator CCHC(Zn) family [Rosa chinensis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN18577_c2_g3_i1 2.730793371 5.461586742 0 0 #NAME? 0.029544699 0.093077857 Down 1.583871 1.154908 0.6274505 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18579_c1_g1_i1 27.7309896 12.58207608 42.87990312 3.40801493 1.768931656 0.003572887 0.015870836 Up 1.057077 0.4242265 1.403207 3.876115 2.428517 1.773881 XP_012856095.1 PREDICTED: putative disease resistance protein RGA3 [Erythranthe guttata] Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=RGA4 PE=2 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Biological Process: defense response (GO:0006952);|Molecular Function: ADP binding (GO:0043531); PF00931.21 NB-ARC domain TRINITY_DN1858_c0_g1_i1 8.289043594 3.243714843 13.33437234 4.110833717 2.039431016 0.041988898 0.12334986 Up 0.1821294 0.1779961 0.7023245 2.189 0.8500954 0.9282352 XP_011087132.1 G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 [Sesamum indicum] Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana OX=3702 GN=RLK1 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- T ENOG410YBN4 G-type lectin S-receptor-like serine threonine-protein kinase -- PF08276.10 PAN-like domain TRINITY_DN18590_c1_g1_i2 12.63960789 23.77789468 1.501321113 0.063139363 -3.985316494 1.16E-05 9.32E-05 Down 1.392343 1.55075 2.086053 0.06919427 0.06834697 0.1490035 PIN00092.1 "hypothetical protein CDL12_27404, partial [Handroanthus impetiginosus]" Q8GYK7|Y5285_ARATH TLC domain-containing protein At5g14285 OS=Arabidopsis thaliana OX=3702 GN=At5g14285 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG4111S22 TLC Cellular Component: integral component of membrane (GO:0016021); PF03798.15 TLC domain TRINITY_DN18591_c0_g1_i1 268.1857013 176.4346889 359.9367137 2.040056385 1.028609028 4.82E-09 6.33E-08 Up 10.75246 11.35241 10.2785 20.31905 17.57488 15.25846 PIN08149.1 hypothetical protein CDL12_19277 [Handroanthus impetiginosus] Q5M750|VQ4_ARATH VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YVV0 VQ motif-containing protein Cellular Component: nucleus (GO:0005634);|Biological Process: defense response (GO:0006952);|Biological Process: negative regulation of DNA-binding transcription factor activity (GO:0043433);|Biological Process: negative regulation of cellular defense response (GO:0051245); PF05678.13 VQ motif TRINITY_DN18595_c0_g1_i2 53.78380537 72.72826077 34.83934997 0.479034554 -1.061798369 0.00534428 0.022435302 Down 3.551515 2.332295 2.062686 1.226029 0.9777632 0.875046 XP_011075699.1 probable glycosyltransferase At5g03795 isoform X1 [Sesamum indicum] Q9FFN2|GLYT3_ARATH Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana OX=3702 GN=At5g03795 PE=3 SV=2 -- -- -- -- -- -- KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1 [GMW] METABOLISM|CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING Carbohydrate transport and metabolism |Cell wall/membrane/envelope biogenesis |Extracellular structures S ENOG410XTFH Exostosin "Cellular Component: Golgi membrane (GO:0000139);|Biological Process: protein glycosylation (GO:0006486);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);|Biological Process: cell wall organization (GO:0071555);" PF03016.14 Exostosin family TRINITY_DN18599_c0_g1_i1 4482.467861 6721.41688 2243.518842 0.333786593 -1.583002086 2.60E-127 9.00E-125 Down 132.2098 132.2341 138.5322 36.58953 36.57514 35.36297 XP_011082867.1 "polyphenol oxidase I, chloroplastic [Sesamum indicum]" Q9MB14|PPO2_IPOBA "Polyphenol oxidase II, chloroplastic OS=Ipomoea batatas OX=4120 GN=co-2 PE=2 SV=2" sind:105165519 K00422 E1.10.3.1 polyphenol oxidase ko00950|ko00350 Isoquinoline alkaloid biosynthesis|Tyrosine metabolism -- -- -- -- -- S ENOG410XSH6 polyphenol oxidase Molecular Function: catechol oxidase activity (GO:0004097);|Cellular Component: chloroplast thylakoid lumen (GO:0009543);|Biological Process: pigment biosynthetic process (GO:0046148);|Molecular Function: metal ion binding (GO:0046872); "PF12143.7,PF00264.19,PF12142.7,PF09331.10" Protein of unknown function (DUF_B2219)|Common central domain of tyrosinase|Polyphenol oxidase middle domain|Domain of unknown function (DUF1985) TRINITY_DN18599_c0_g2_i4 405.019346 565.4294891 244.609203 0.432607792 -1.208868443 1.68E-18 5.00E-17 Down 16.57387 19.32132 17.21316 5.462926 6.951082 6.117702 XP_011082867.1 "polyphenol oxidase I, chloroplastic [Sesamum indicum]" Q9MB14|PPO2_IPOBA "Polyphenol oxidase II, chloroplastic OS=Ipomoea batatas OX=4120 GN=co-2 PE=2 SV=2" sind:105165519 K00422 E1.10.3.1 polyphenol oxidase ko00950|ko00350 Isoquinoline alkaloid biosynthesis|Tyrosine metabolism -- -- -- -- -- S ENOG410XSH6 polyphenol oxidase Molecular Function: catechol oxidase activity (GO:0004097);|Cellular Component: chloroplast thylakoid lumen (GO:0009543);|Biological Process: pigment biosynthetic process (GO:0046148);|Molecular Function: metal ion binding (GO:0046872); "PF12143.7,PF00264.19,PF12142.7" Protein of unknown function (DUF_B2219)|Common central domain of tyrosinase|Polyphenol oxidase middle domain TRINITY_DN1859_c0_g1_i1 9.898357895 19.0251391 0.771576693 0.04055564 -4.623953626 3.65E-05 0.000265673 Down 1.933266 1.332634 1.441307 0 0 0.1875934 PIN22348.1 hypothetical protein CDL12_04948 [Handroanthus impetiginosus] Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: protein dimerization activity (GO:0046983);" PF00010.25 Helix-loop-helix DNA-binding domain TRINITY_DN18613_c0_g2_i1 14.4223669 5.959865226 22.88486857 3.839829879 1.941042395 0.005857103 0.024269418 Up 1.023651 0.3673826 0.1564036 1.53864 0.9062832 2.34818 EYU21722.1 hypothetical protein MIMGU_mgv1a002818mg [Erythranthe guttata] F4JH53|FDM2_ARATH Factor of DNA methylation 2 OS=Arabidopsis thaliana OX=3702 GN=FDM2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGHF XH XS domain-containing protein Biological Process: regulation of double-strand break repair via homologous recombination (GO:0010569);|Biological Process: RNA-directed DNA methylation (GO:0080188); PF03469.13 XH domain TRINITY_DN18628_c0_g1_i1 116.2099687 201.4790531 30.94088425 0.15356874 -2.703043523 1.74E-12 3.31E-11 Down 10.99922 7.58283 12.20289 1.424406 0.9172263 1.460055 XP_011094815.1 WAT1-related protein At2g37460 [Sesamum indicum] Q9ZUS1|WTR13_ARATH WAT1-related protein At2g37460 OS=Arabidopsis thaliana OX=3702 GN=At2g37460 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBPN Auxin-induced protein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); PF00892.19 EamA-like transporter family TRINITY_DN18632_c0_g1_i3 136.2191318 186.7197583 85.71850535 0.459075709 -1.123195999 6.30E-07 6.24E-06 Down 12.24138 11.39533 11.63528 4.880856 4.168465 4.025875 PIN00301.1 hypothetical protein CDL12_27197 [Handroanthus impetiginosus] Q4GZK7|ORR4_ORYSI Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=RR4 PE=2 SV=1 sind:105159462 K14492 ARR-A two-component response regulator ARR-A family ko04075 Plant hormone signal transduction KOG1601 GATA-4/5/6 transcription factors [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5641 Transcription factor Biological Process: phosphorelay signal transduction system (GO:0000160);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to cytokinin (GO:0009735);|Biological Process: cytokinin-activated signaling pathway (GO:0009736); PF00072.23 Response regulator receiver domain TRINITY_DN1863_c0_g1_i1 11.3029061 19.13371707 3.47209512 0.181464747 -2.462238793 0.022841036 0.075482174 Down 5.856503 4.924041 1.333091 0 0 1.77125 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18642_c0_g2_i1 21.67794488 11.34412165 32.01176811 2.821881596 1.496657455 0.011014893 0.041209845 Up 0.3806681 0.8832327 1.214913 1.866572 1.708922 2.091008 PIN17156.1 Glutathione S-transferase [Handroanthus impetiginosus] Q9CA57|GSTUA_ARATH Glutathione S-transferase U10 OS=Arabidopsis thaliana OX=3702 GN=GSTU10 PE=2 SV=1 vvi:100263691 K00799 "GST, gst" glutathione S-transferase ko00480 Glutathione metabolism KOG0406 Glutathione S-transferase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XSIX glutathione Stransferase Molecular Function: glutathione transferase activity (GO:0004364);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: glutathione metabolic process (GO:0006749);|Biological Process: toxin catabolic process (GO:0009407); -- -- TRINITY_DN18643_c0_g3_i1 2.943027699 5.886055398 0 0 #NAME? 0.020717461 0.069702618 Down 0.3171271 1.387964 0.6075003 1.72E-80 0 0 XP_011100006.1 mitochondrial uncoupling protein 5-like [Sesamum indicum] Q9SJY5|PUMP5_ARATH Mitochondrial uncoupling protein 5 OS=Arabidopsis thaliana OX=3702 GN=PUMP5 PE=2 SV=1 sind:105178260 K15104 "SLC25A11, OGC" "solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11" -- -- KOG0759 Mitochondrial oxoglutarate/malate carrier proteins [C] METABOLISM Energy production and conversion S ENOG410XQHU Mitochondrial Molecular Function: dicarboxylic acid transmembrane transporter activity (GO:0005310);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Biological Process: mitochondrial transport (GO:0006839);|Biological Process: sulfate transport (GO:0008272);|Molecular Function: sulfate transmembrane transporter activity (GO:0015116);|Molecular Function: thiosulfate transmembrane transporter activity (GO:0015117);|Molecular Function: oxaloacetate transmembrane transporter activity (GO:0015131);|Molecular Function: malate transmembrane transporter activity (GO:0015140);|Molecular Function: succinate transmembrane transporter activity (GO:0015141);|Molecular Function: antiporter activity (GO:0015297);|Biological Process: thiosulfate transport (GO:0015709);|Biological Process: oxaloacetate transport (GO:0015729);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidative phosphorylation uncoupler activity (GO:0017077);|Biological Process: phosphate ion transmembrane transport (GO:0035435);|Biological Process: succinate transmembrane transport (GO:0071422);|Biological Process: malate transmembrane transport (GO:0071423);|Biological Process: proton transmembrane transport (GO:1902600); -- -- TRINITY_DN18645_c0_g3_i1 964.4601708 622.0905972 1306.829744 2.100706473 1.070874592 5.09E-28 2.61E-26 Up 44.49271 48.53833 51.68927 80.95048 83.6064 80.79202 XP_011070591.1 protein PLANT CADMIUM RESISTANCE 2-like [Sesamum indicum] Q9LQU4|PCR2_ARATH Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=PCR2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XUTP Protein PLANT CADMIUM RESISTANCE Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN18651_c0_g1_i1 253.7383014 144.221055 363.2555477 2.51874144 1.332703031 2.02E-15 4.81E-14 Up 10.97752 11.57906 10.71805 22.3322 22.8307 22.49097 XP_011100442.1 VQ motif-containing protein 22-like [Sesamum indicum] Q9LIE6|VQ22_ARATH VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZCTV VQ motif-containing protein Cellular Component: nucleus (GO:0005634); PF05678.13 VQ motif TRINITY_DN18656_c0_g1_i1 112.9376261 9.059078021 216.8161742 23.93358062 4.580964345 2.80E-48 2.90E-46 Up 0.2519662 0.2775075 0.6000657 7.175101 7.266371 6.911768 AJD25156.1 cytochrome P450 CYP71AT92 [Salvia miltiorrhiza] O65782|C83B1_ARATH Cytochrome P450 83B1 OS=Arabidopsis thaliana OX=3702 GN=CYP83B1 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Biological Process: tryptophan biosynthetic process (GO:0000162);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: shade avoidance (GO:0009641);|Biological Process: induced systemic resistance (GO:0009682);|Biological Process: indoleacetic acid biosynthetic process (GO:0009684);|Biological Process: indole glucosinolate biosynthetic process (GO:0009759);|Biological Process: response to red light (GO:0010114);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);|Biological Process: regulation of growth (GO:0040008);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: adventitious root development (GO:0048830);|Biological Process: defense response by callose deposition in cell wall (GO:0052544);" PF00067.21 Cytochrome P450 TRINITY_DN18657_c0_g1_i1 100.7978952 38.73698769 162.8588026 4.204219594 2.071838026 1.60E-14 3.54E-13 Up 1.876042 1.402978 2.003115 6.313359 6.183484 5.543879 XP_011071304.1 vinorine synthase-like [Sesamum indicum] Q70PR7|VINSY_RAUSE Vinorine synthase OS=Rauvolfia serpentina OX=4060 GN=ACT PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG41113FV Transferase family Biological Process: alkaloid metabolic process (GO:0009820);|Molecular Function: vinorine synthase activity (GO:0050636); PF02458.14 Transferase family TRINITY_DN18660_c0_g1_i2 50.04246542 88.22868582 11.85624503 0.134380841 -2.895600628 1.13E-12 2.18E-11 Down 2.946897 3.066034 3.449256 0.3064057 0.3903635 0.3098292 PNX92269.1 cysteine-rich receptor-like protein kinase [Trifolium pratense] P92555|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111K5V Reverse transcriptase (RNA-dependent DNA polymerase) Cellular Component: mitochondrion (GO:0005739); PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN18660_c0_g2_i1 20.21566167 32.69571062 7.735612717 0.236594115 -2.079513907 0.000901375 0.004759168 Down 3.896424 4.093855 2.109992 0.9902539 0.6106553 0.3032899 RHN38708.1 putative reverse transcriptase zinc-binding domain-containing protein [Medicago truncatula] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- PF13966.5 zinc-binding in reverse transcriptase TRINITY_DN18660_c0_g3_i1 13.46891656 26.93783312 0 0 #NAME? 2.20E-07 2.31E-06 Down 3.849683 1.391497 4.154225 7.85E-20 3.98E-35 1.67E-32 PNY18056.1 ribonuclease H [Trifolium pratense] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- PF13966.5 zinc-binding in reverse transcriptase TRINITY_DN18663_c0_g7_i1 30.6071989 61.21439779 0 0 #NAME? 8.34E-20 2.69E-18 Down 6.850001 7.390088 7.572904 9.12E-56 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18671_c0_g1_i1 12.67450172 18.98921502 6.359788424 0.334915815 -1.578129592 0.040749448 0.120402246 Down 2.082027 2.462329 1.441034 0.643572 0.3176087 0.6555261 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18672_c3_g1_i7 106.0367533 177.1180003 34.9555062 0.197357164 -2.341119207 1.12E-17 3.16E-16 Down 9.045984 10.50362 7.916891 1.624199 1.98602 0.7210105 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18672_c3_g3_i3 39.8613016 74.95061707 4.771986131 0.063668404 -3.973278601 4.25E-15 9.90E-14 Down 4.718891 4.438024 4.782356 0.1423707 0.4291127 0.1389559 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18673_c0_g1_i3 38.73756262 55.15919596 22.31592928 0.404573143 -1.305527543 0.002007192 0.009664029 Down 3.098819 3.041965 2.744263 0.9962228 0.886514 0.9957474 XP_011085300.1 protein SRG1-like [Sesamum indicum] Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase "Biological Process: leaf senescence (GO:0010150);|Molecular Function: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor (GO:0016682);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213);" "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN18679_c0_g2_i1 9.602563756 19.20512751 0 0 #NAME? 1.30E-06 1.22E-05 Down 2.996115 2.014933 2.490362 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18680_c0_g1_i2 14.76630345 22.26153244 7.271074454 0.326620572 -1.614312435 0.025229879 0.08182181 Down 5.66207 3.596816 4.036324 0.8325948 2.569485 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18690_c0_g1_i1 5842.88268 2596.435337 9089.330023 3.500695701 1.807641661 4.21E-146 1.86E-143 Up 91.17289 95.33528 91.7491 266.0106 269.4736 250.3136 XP_012845287.1 PREDICTED: cell division control protein 48-like [Erythranthe guttata] Q9FLD5|ASD_ARATH "AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=AATP1 PE=1 SV=1" -- -- -- -- -- -- KOG0743 AAA+-type ATPase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0465 "Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)" Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: response to cold (GO:0009409);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: fruit development (GO:0010154);|Biological Process: seed maturation (GO:0010431);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887);|Cellular Component: mitochondrial membrane (GO:0031966); "PF14363.5,PF00004.28" Domain associated at C-terminal with AAA|ATPase family associated with various cellular activities (AAA) TRINITY_DN18692_c0_g4_i1 17.99780688 34.83824871 1.15736504 0.033221103 -4.911756226 5.65E-09 7.35E-08 Down 2.872018 2.051315 1.603936 0 1.28E-64 0.1489683 RAL47834.1 hypothetical protein DM860_011419 [Cuscuta australis] Q653N3|MP703_ORYSJ Microtubule-associated protein 70-3 OS=Oryza sativa subsp. japonica OX=39947 GN=MAP70.3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZDCM Microtubule-associated protein Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874);|Biological Process: cytoskeleton organization (GO:0007010);|Molecular Function: microtubule binding (GO:0008017); -- -- TRINITY_DN18694_c0_g1_i1 21.17487544 38.70102879 3.648722099 0.094279718 -3.406908739 0.000285397 0.001711364 Down 2.572199 7.183589 4.137194 0.4876608 0.4737132 0 XP_020547588.1 uncharacterized protein LOC110011574 [Sesamum indicum] P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Cellular Component: mitochondrion (GO:0005739); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN18694_c0_g2_i1 23.63881928 42.17997552 5.097663041 0.12085505 -3.048650339 4.29E-07 4.35E-06 Down 2.35803 2.393039 3.474378 0.2970738 0.4873083 0 XP_015078389.1 PREDICTED: uncharacterized protein LOC107022231 [Solanum pennellii] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN18694_c0_g3_i2 10.95625805 18.87331556 3.039200551 0.161031619 -2.634584106 0.002259604 0.010682171 Down 2.312301 1.973225 2.762983 0 0.2406974 0.7439097 XP_010267875.1 PREDICTED: uncharacterized protein LOC104604981 [Nelumbo nucifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN18697_c0_g1_i6 2084.038391 836.4057684 3331.671013 3.983319029 1.993971032 6.74E-100 1.68E-97 Up 73.3266 70.38637 64.14512 227.685 230.733 209.1079 EYU43991.1 hypothetical protein MIMGU_mgv1a015249mg [Erythranthe guttata] O50001|PRU1_PRUAR Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZD18 Pathogenesis-related protein Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607); PF00407.18 Pathogenesis-related protein Bet v I family TRINITY_DN186_c0_g1_i1 8.7887537 17.5775074 0 0 #NAME? 0.000195563 0.001218222 Down 4.732782 1.356053 2.235969 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18703_c0_g1_i8 150.1879874 96.64246059 203.7335141 2.108115966 1.075954231 3.26E-07 3.36E-06 Up 4.884008 4.610102 4.026089 7.899094 7.20031 7.923294 XP_020548453.1 uncharacterized protein LOC105170032 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YY12 Domain-Containing protein -- PF03107.15 C1 domain TRINITY_DN18705_c0_g2_i1 12.62720385 22.3094196 2.944988106 0.132006487 -2.921319268 0.000458165 0.002612419 Down 4.719082 2.503437 3.985872 0 0.9380944 0.3027727 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18705_c1_g2_i1 9.473562691 18.94712538 0 0 #NAME? 1.58E-06 1.47E-05 Down 3.658402 1.421225 2.594922 0 0 0 XP_011076116.1 uncharacterized protein LOC105160444 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG5505 Protein of unknown function (DUF819) -- -- -- TRINITY_DN18705_c1_g3_i1 10.75875734 17.03710445 4.480410229 0.26297956 -1.926977425 0.023418333 0.076964116 Down 2.030093 1.973153 1.65168 0.2870597 0.4358482 0.495345 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18705_c1_g4_i1 6.145196039 12.29039208 0 0 #NAME? 0.026468858 0.085128302 Down 0 2.058607 5.381898 0 0 0 XP_019150018.1 PREDICTED: ACT domain-containing protein ACR4-like isoform X1 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y95G ACT domain -- -- -- TRINITY_DN18705_c1_g6_i1 23.19524133 33.70254951 12.68793315 0.376468052 -1.409400656 0.007535433 0.030044437 Down 4.643385 4.466148 8.514698 1.202704 1.766004 2.301043 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18712_c0_g1_i2 345.4509158 474.5039374 216.3978942 0.456050787 -1.132733599 1.20E-14 2.70E-13 Down 11.23227 13.93225 12.02057 4.613571 4.315419 4.750137 PIN13150.1 G1/S-specific cyclin D [Handroanthus impetiginosus] P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD1-1 PE=1 SV=3 sind:105168218 K18810 CYCD1_2_4 "cyclin D1/2/4, plant" -- -- KOG0656 G1/S-specific cyclin D [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D ENOG410XRKC "(DC) complex that phosphorylates and inhibits members of the retinoblastoma (RB) protein family including RB1 and regulates the cell-cycle during G(1) S transition. Phosphorylation of RB1 allows dissociation of the transcription factor E2F from the RB E2F complex and the subsequent transcription of E2F target genes which are responsible for the progression through the G(1) phase. Hypophosphorylates RB1 in early G(1) phase. Cyclin D-CDK4 complexes are major integrators of various mitogenenic and antimitogenic signals. Also substrate for SMAD3, phosphorylating SMAD3 in a cell-cycle-dependent manner and repressing its transcriptional activity. Component of the ternary complex, cyclin" Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);|Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: cyclin-dependent protein kinase holoenzyme complex (GO:0000307);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: regulation of mitotic nuclear division (GO:0007088);|Biological Process: positive regulation of cell proliferation (GO:0008284);|Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);|Molecular Function: protein kinase binding (GO:0019901);|Biological Process: positive regulation of cell cycle (GO:0045787);|Biological Process: cell division (GO:0051301); "PF00134.22,PF02984.18" "Cyclin, N-terminal domain|Cyclin, C-terminal domain" TRINITY_DN18717_c0_g1_i3 36.48182537 70.38089787 2.582752871 0.036696788 -4.768202407 1.25E-11 2.19E-10 Down 4.442223 7.43837 4.282668 0 0.3205101 0.1583118 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18720_c0_g1_i1 260.011732 67.96958531 452.0538786 6.650825903 2.733533506 1.76E-52 2.06E-50 Up 3.26971 2.057677 2.71164 14.35039 13.85504 14.90405 XP_011088741.1 scopoletin glucosyltransferase-like [Sesamum indicum] Q9AT54|SCGT_TOBAC Scopoletin glucosyltransferase OS=Nicotiana tabacum OX=4097 GN=TOGT1 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: identical protein binding (GO:0042802);|Molecular Function: scopoletin glucosyltransferase activity (GO:0050275); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN18730_c0_g3_i1 16.91866459 30.1232217 3.714107484 0.123297153 -3.019788604 2.39E-05 0.000180058 Down 1.670072 1.684786 2.044879 0.1931536 0.1455276 0.1658303 XP_019181774.1 PREDICTED: uncharacterized protein LOC109176829 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18738_c0_g1_i2 28.97953974 7.546919676 50.4121598 6.679832563 2.73981194 1.32E-07 1.43E-06 Up 0.1442519 1.384161 0.6511107 4.101639 4.257241 3.569466 XP_011091501.1 zinc finger protein ZAT12-like [Sesamum indicum] Q9SLD4|ZAT11_ARATH Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1 -- -- -- -- -- -- KOG1721 FOG: Zn-finger [R] POORLY CHARACTERIZED General function prediction only S COG5048 Zinc finger protein "Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: response to chitin (GO:0010200);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: cellular response to nickel ion (GO:0071289);|Biological Process: regulation of root development (GO:2000280);" "PF13912.5,PF13894.5,PF12171.7" C2H2-type zinc finger|C2H2-type zinc finger|Zinc-finger double-stranded RNA-binding TRINITY_DN18739_c0_g1_i2 1278.671037 800.0243952 1757.317678 2.196580115 1.135259119 1.89E-37 1.38E-35 Up 35.18289 35.00465 38.03293 63.85309 63.01344 65.13492 XP_011098592.1 aldose 1-epimerase [Sesamum indicum] D4AMB9|GALM_ARTBC Probable aldose 1-epimerase ARB_05372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_05372 PE=1 SV=1 sind:105177225 K01785 "galM, GALM" aldose 1-epimerase ko00052|ko00010 Galactose metabolism|Glycolysis / Gluconeogenesis KOG1604 Predicted mutarotase [G] METABOLISM Carbohydrate transport and metabolism G COG2017 "converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose (By similarity)" Molecular Function: aldose 1-epimerase activity (GO:0004034);|Cellular Component: extracellular region (GO:0005576);|Biological Process: hexose metabolic process (GO:0019318);|Molecular Function: carbohydrate binding (GO:0030246); PF01263.19 Aldose 1-epimerase TRINITY_DN18740_c2_g2_i4 16.998877 33.99775399 0 0 #NAME? 3.17E-11 5.35E-10 Down 3.814836 2.020578 2.618733 4.67E-19 0 2.33E-90 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18744_c0_g2_i1 6.924806709 12.39012458 1.45948884 0.117794525 -3.085655609 0.024630083 0.080226276 Down 3.217626 0.3927923 3.149241 0.3822633 0.3846875 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18744_c0_g3_i1 20.77408727 36.67670202 4.871472524 0.132821989 -2.912434083 4.04E-06 3.50E-05 Down 2.972144 3.030551 4.101122 0.3106794 0.2074273 0.5526385 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18746_c0_g1_i1 3253.33255 1756.398327 4750.266774 2.704549817 1.435388472 1.83E-93 4.34E-91 Up 136.299 159.9051 161.7841 337.9313 339.776 321.4303 PIN21206.1 60s ribosomal protein L15/L27 [Handroanthus impetiginosus] P49637|R27A3_ARATH 60S ribosomal protein L27a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27AC PE=2 SV=2 sind:105178543 K02900 "RP-L27Ae, RPL27A" large subunit ribosomal protein L27Ae ko03010 Ribosome KOG1742 60s ribosomal protein L15/L27 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0200 Binds to the 23S rRNA (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: polysomal ribosome (GO:0042788); PF00828.18 "Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A" TRINITY_DN1874_c0_g1_i1 8.68811895 17.3762379 0 0 #NAME? 5.19E-06 4.42E-05 Down 2.023081 1.651746 1.432454 0 0 0 AAX43786.1 "ribosomal protein L14, partial [synthetic construct]" O94238|RL14_SCHPO 60S ribosomal protein L14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl14 PE=2 SV=1 ppp:PHYPADRAFT_109225 K02875 "RP-L14e, RPL14" large subunit ribosomal protein L14e ko03010 Ribosome KOG3421 60S ribosomal protein L14 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2163 (ribosomal) protein Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Biological Process: ribosomal large subunit biogenesis (GO:0042273); PF01929.16 Ribosomal protein L14 TRINITY_DN18751_c0_g1_i6 107.3782282 214.7564563 0 0 #NAME? 2.37E-66 3.73E-64 Down 16.92491 20.14855 16.37474 0 0 0 XP_011070055.1 calmodulin-binding protein 25-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18751_c0_g5_i1 67.18617951 39.4777499 94.89460911 2.403749184 1.265286368 8.36E-05 0.000563803 Up 1.936282 3.9865 3.853848 6.096485 7.068597 5.670904 XP_011070055.1 calmodulin-binding protein 25-like [Sesamum indicum] O80683|CAB25_ARATH Calmodulin-binding protein 25 OS=Arabidopsis thaliana OX=3702 GN=CAMBP25 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YN0G VQ motif-containing protein Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to salt stress (GO:0009651);|Biological Process: regulation of salicylic acid metabolic process (GO:0010337); PF05678.13 VQ motif TRINITY_DN18751_c0_g6_i2 9528.692377 14333.17772 4724.207033 0.329599418 -1.601214401 4.59E-158 2.34E-155 Down 835.5645 827.7279 843.6578 218.0896 234.2207 214.3561 KZV25422.1 hypothetical protein F511_19802 [Dorcoceras hygrometricum] Q39529|LEC2_CLAKE Agglutinin-2 OS=Cladrastis kentukea OX=38412 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: mannose binding (GO:0005537);|Molecular Function: metal ion binding (GO:0046872); PF00139.18 Legume lectin domain TRINITY_DN18754_c0_g1_i1 6.620573325 11.34876324 1.892383409 0.166747986 -2.584258762 0.022565317 0.074750597 Down 0.341944 1.318759 1.028898 0.1126414 0 0.2363587 XP_021812027.1 U-box domain-containing protein 4 [Prunus avium] Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=PUB45 PE=1 SV=1 -- -- -- -- -- -- KOG0167 FOG: Armadillo/beta-catenin-like repeats [S] POORLY CHARACTERIZED Function unknown S ENOG410XRTN U-box domain-containing protein Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transmembrane receptor protein serine/threonine kinase binding (GO:0070696); -- -- TRINITY_DN18756_c0_g1_i2 497.543106 988.4295736 6.656638275 0.00673456 -7.214200593 3.29E-247 2.87E-244 Down 61.27952 56.74238 60.30778 0.4275481 0.3265696 0.2502277 XP_011099227.1 salicylic acid-binding protein 2-like [Sesamum indicum] Q6RYA0|SABP2_TOBAC Salicylic acid-binding protein 2 OS=Nicotiana tabacum OX=4097 GN=SABP2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111IVV esterase "Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);|Molecular Function: lipase activity (GO:0016298);|Molecular Function: methyl salicylate esterase activity (GO:0080031);" "PF12697.6,PF00561.19,PF12146.7" "Alpha/beta hydrolase family|alpha/beta hydrolase fold|Serine aminopeptidase, S33" TRINITY_DN18757_c0_g1_i1 543.2581446 341.4514116 745.0648777 2.182052416 1.125685758 4.46E-21 1.58E-19 Up 16.14677 19.3658 15.85696 31.01553 31.84841 27.54635 AHK06505.1 "isopentenyl diphosphate isomerase, partial [Pogostemon cablin]" O48964|IDI1_CAMAC Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata OX=16922 GN=IPI1 PE=2 SV=1 sind:105166860 K01823 "idi, IDI" isopentenyl-diphosphate Delta-isomerase ko00900 Terpenoid backbone biosynthesis KOG0142 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " I COG1443 "Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP) (By similarity)" Molecular Function: isopentenyl-diphosphate delta-isomerase activity (GO:0004452);|Biological Process: isoprenoid biosynthetic process (GO:0008299);|Biological Process: photosynthesis (GO:0015979);|Biological Process: chlorophyll biosynthetic process (GO:0015995);|Molecular Function: hydrolase activity (GO:0016787);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: dimethylallyl diphosphate biosynthetic process (GO:0050992); PF00293.27 NUDIX domain TRINITY_DN18763_c0_g1_i25 180.0672822 263.2197898 96.91477459 0.368189545 -1.441479434 8.47E-12 1.51E-10 Down 17.38499 21.13088 22.37648 7.683108 5.958982 4.3741 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18769_c0_g1_i2 4070.872062 2682.400767 5459.343358 2.035245227 1.025202636 5.49E-55 6.89E-53 Up 108.106 107.4523 102.0357 179.868 174.0254 167.4874 EEF32394.1 "40S ribosomal protein sa, putative [Ricinus communis]" O22518|RSSA_SOYBN 40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1 rcu:8283406 K02998 "RP-SAe, RPSA" small subunit ribosomal protein SAe ko03010 Ribosome KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0052 30S ribosomal protein S2 "Biological Process: ribosomal small subunit assembly (GO:0000028);|Biological Process: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000447);|Biological Process: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000461);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: rRNA export from nucleus (GO:0006407);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);" PF00318.19 Ribosomal protein S2 TRINITY_DN1876_c0_g1_i1 4.636680729 0.651223126 8.622138333 13.23991423 3.726821872 0.012166341 0.044830483 Up 0.4225185 0 0 1.110666 1.096689 2.050541 XP_022896914.1 L-type lectin-domain containing receptor kinase IX.1-like [Olea europaea var. sylvestris] P93535|LECS_STYJP Seed lectin OS=Styphnolobium japonicum OX=3897 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase Molecular Function: mannose binding (GO:0005537);|Molecular Function: metal ion binding (GO:0046872); PF00139.18 Legume lectin domain TRINITY_DN18770_c0_g2_i1 67.59060817 93.68522809 41.49598825 0.442929895 -1.174849721 0.000162103 0.001027843 Down 7.508428 5.655269 9.07634 3.218224 2.576672 2.177746 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18776_c0_g1_i1 287.2674708 173.2612634 401.2736783 2.316003418 1.211637382 1.86E-14 4.09E-13 Up 4.971302 4.90629 4.75534 9.667228 8.618151 9.085247 PIN20299.1 Monogalactosyldiacylglycerol synthase [Handroanthus impetiginosus] O82730|MGDG2_ARATH "Monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MGD2 PE=1 SV=1" sind:105162237 K03715 E2.4.1.46 "1,2-diacylglycerol 3-beta-galactosyltransferase" ko00561 Glycerolipid metabolism -- -- -- -- -- M COG0707 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (By similarity) "Biological Process: fatty acid metabolic process (GO:0006631);|Biological Process: glycolipid biosynthetic process (GO:0009247);|Cellular Component: chloroplast outer membrane (GO:0009707);|Biological Process: cellular response to phosphate starvation (GO:0016036);|Biological Process: galactolipid metabolic process (GO:0019374);|Molecular Function: UDP-galactosyltransferase activity (GO:0035250);|Molecular Function: 1,2-diacylglycerol 3-beta-galactosyltransferase activity (GO:0046509);" "PF06925.10,PF04101.15" Monogalactosyldiacylglycerol (MGDG) synthase|Glycosyltransferase family 28 C-terminal domain TRINITY_DN18778_c0_g1_i1 6.450183073 12.90036615 0 0 #NAME? 0.000118687 0.000774407 Down 2.631162 0.8501825 2.23924 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18778_c0_g2_i1 14.24046189 28.48092378 0 0 #NAME? 1.48E-07 1.60E-06 Down 3.954931 6.633213 2.639777 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18778_c4_g1_i1 36.11429616 65.28440207 6.944190241 0.10636829 -3.232859963 5.43E-11 8.90E-10 Down 3.599685 3.079902 2.467442 1.24E-16 1.16E-20 0.8058589 XP_016665658.1 "PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X2 [Gossypium hirsutum]" Q7Y0D4|TR164_ORYSJ "Thioredoxin-like protein HCF164, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767500 PE=2 SV=1" -- -- -- -- -- -- KOG0907 Thioredoxin [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0526 Thioredoxin "Biological Process: glycerol ether metabolic process (GO:0006662);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: cytochrome b6f complex assembly (GO:0010190);|Molecular Function: protein disulfide oxidoreductase activity (GO:0015035);|Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671);|Biological Process: cell redox homeostasis (GO:0045454);" -- -- TRINITY_DN18778_c4_g3_i1 101.9264114 202.0075457 1.845277186 0.009134694 -6.774427828 8.25E-56 1.05E-53 Down 6.639068 6.335283 6.129881 0.06866531 0.06827091 0.03703657 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18782_c1_g1_i2 170.2989756 255.7735307 84.82442053 0.331638776 -1.592315397 5.39E-12 9.76E-11 Down 17.58974 21.92546 15.82747 3.929939 5.324444 5.50423 XP_011083164.1 "ribosomal RNA small subunit methyltransferase, mitochondrial [Sesamum indicum]" Q9FK02|DIM1B_ARATH "Ribosomal RNA small subunit methyltransferase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DIM1B PE=1 SV=1" sind:105165746 K14191 DIM1 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase -- -- KOG0820 Ribosomal RNA adenine dimethylase [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification J COG0030 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (By similarity) "Molecular Function: rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179);|Molecular Function: RNA binding (GO:0003723);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: rRNA methylation (GO:0031167);|Biological Process: adenosine metabolic process (GO:0046085);" "PF00398.19,PF13649.5" Ribosomal RNA adenine dimethylase|Methyltransferase domain TRINITY_DN18783_c0_g1_i2 255.8196829 347.9732762 163.6660897 0.470340974 -1.088221076 8.16E-11 1.31E-09 Down 22.98682 22.24458 22.08168 9.07936 7.512199 8.928612 XP_011100010.1 14-3-3 protein 1-like isoform X1 [Sesamum indicum] P93206|14331_SOLLC 14-3-3 protein 1 OS=Solanum lycopersicum OX=4081 GN=TFT1 PE=3 SV=2 -- -- -- -- -- -- KOG0841 Multifunctional chaperone (14-3-3 family) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " T COG5040 Tyrosine 3-monooxygenase tryptophan 5-monooxygenase activation protein Molecular Function: protein domain specific binding (GO:0019904); PF00244.19 14-3-3 protein TRINITY_DN18784_c0_g1_i7 69.12407922 106.3492412 31.89891718 0.299944944 -1.737230383 6.08E-08 6.92E-07 Down 6.774603 6.478421 7.01659 1.193761 2.090715 1.648935 XP_012840991.1 PREDICTED: uncharacterized protein LOC105961301 [Erythranthe guttata] Q8LFP9|ABA4_ARATH "Protein ABA DEFICIENT 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABA4 PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG41100EE NA Biological Process: abscisic acid biosynthetic process (GO:0009688);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: xanthophyll metabolic process (GO:0016122);|Cellular Component: chloroplast membrane (GO:0031969);|Biological Process: regulation of superoxide anion generation (GO:0032928); PF14108.5 Domain of unknown function (DUF4281) TRINITY_DN18792_c0_g1_i2 80.12558169 160.2511634 0 0 #NAME? 4.26E-50 4.69E-48 Down 6.174416 7.661267 6.426022 0 0 1.51E-66 XP_016443772.1 PREDICTED: MLO-like protein 6 [Nicotiana tabacum] Q94KB7|MLO6_ARATH MLO-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=MLO6 PE=2 SV=2 sly:101253157 K08472 MLO mlo protein -- -- -- -- -- -- -- -- -- -- "Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response to fungus, incompatible interaction (GO:0009817);|Cellular Component: integral component of membrane (GO:0016021);" PF03094.14 Mlo family TRINITY_DN18792_c0_g5_i2 80.79388202 161.587764 0 0 #NAME? 4.29E-45 4.03E-43 Down 12.66109 9.358207 9.421158 1.06E-26 1.42E-57 3.65E-56 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18793_c0_g2_i1 22.28878999 11.89492888 32.6826511 2.747612149 1.458178369 0.034142601 0.10468322 Up 0.6929985 1.170345 1.342301 1.936236 1.42703 3.712395 KRH69075.1 hypothetical protein GLYMA_02G002300 [Glycine max] O49884|RL30_LUPLU 60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1 mdm:103421295 K02908 "RP-L30e, RPL30" large subunit ribosomal protein L30e ko03010 Ribosome KOG2988 60S ribosomal protein L30 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1911 (ribosomal) protein Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); -- -- TRINITY_DN18798_c0_g1_i1 223.2186329 445.7127952 0.724470471 0.00162542 -9.264971775 6.81E-24 2.81E-22 Down 31.15277 16.5334 21.42211 0 0.08472098 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18798_c0_g2_i4 179.1594834 358.3189667 0 0 #NAME? 3.41E-108 9.74E-106 Down 39.0518 44.29363 37.49811 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18798_c0_g3_i1 8.291797756 16.58359551 0 0 #NAME? 0.000338357 0.001997275 Down 0.9969469 5.741054 3.696106 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18799_c0_g2_i1 399.2070638 212.9222417 585.491886 2.749792043 1.459322517 1.89E-26 8.89E-25 Up 10.2689 10.85641 8.662238 21.46202 23.00951 21.53307 XP_012849692.1 PREDICTED: cinnamoyl-CoA reductase 1-like isoform X2 [Erythranthe guttata] Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana OX=3702 GN=TKPR1 PE=1 SV=1 -- -- -- -- -- -- KOG1502 Flavonol reductase/cinnamoyl-CoA reductase [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms M COG0451 Nad-dependent epimerase dehydratase "Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: pollen development (GO:0009555);|Biological Process: pollen exine formation (GO:0010584);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);|Biological Process: seed development (GO:0048316);|Molecular Function: coenzyme binding (GO:0050662);|Biological Process: sporopollenin biosynthetic process (GO:0080110);" "PF01370.20,PF01073.18,PF13460.5,PF16363.4,PF05368.12,PF07993.11" "NAD dependent epimerase/dehydratase family|3-beta hydroxysteroid dehydrogenase/isomerase family|NAD(P)H-binding|GDP-mannose 4,6 dehydratase|NmrA-like family|Male sterility protein" TRINITY_DN18799_c0_g3_i1 23.64490222 11.71297878 35.57682566 3.037384966 1.602829771 0.005580181 0.023272802 Up 0.4247709 0.3314361 1.558719 2.097213 1.957785 1.643364 XP_012849692.1 PREDICTED: cinnamoyl-CoA reductase 1-like isoform X2 [Erythranthe guttata] Q6K9A2|CCR1_ORYSJ Cinnamoyl-CoA reductase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CCR1 PE=1 SV=1 -- -- -- -- -- -- KOG1502 Flavonol reductase/cinnamoyl-CoA reductase [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms M COG0451 Nad-dependent epimerase dehydratase "Cellular Component: cytoplasm (GO:0005737);|Biological Process: defense response (GO:0006952);|Biological Process: lignin biosynthetic process (GO:0009809);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);|Molecular Function: cinnamoyl-CoA reductase activity (GO:0016621);|Molecular Function: coenzyme binding (GO:0050662);" -- -- TRINITY_DN18802_c0_g2_i1 9.485490332 16.7817474 2.18923326 0.130453236 -2.93839536 0.030289596 0.094960677 Down 0.9574547 6.277606 3.224952 0.6158446 0.6071036 9.61E-21 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18806_c0_g1_i2 28.15956834 56.31913667 0 0 #NAME? 3.32E-18 9.69E-17 Down 2.884941 1.792299 2.230983 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18806_c0_g2_i6 34.81422654 69.62845308 0 0 #NAME? 1.87E-22 7.05E-21 Down 1.482413 1.550069 1.726286 0 0 0 XP_024178102.1 probable serine/threonine-protein kinase kinX [Rosa chinensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18806_c0_g4_i2 20.06102721 40.12205442 0 0 #NAME? 1.04E-07 1.14E-06 Down 1.087839 2.81651 1.463368 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18807_c0_g1_i4 269.5138535 500.8916815 38.13602542 0.076136272 -3.715272255 1.12E-80 2.29E-78 Down 20.35104 23.59932 22.88848 1.42528 1.530371 1.127376 EYU21581.1 hypothetical protein MIMGU_mgv1a010326mg [Erythranthe guttata] Q9ZTA3|AOP1C_ARATH Probable 2-oxoglutarate-dependent dioxygenase AOP1 OS=Arabidopsis thaliana OX=3702 GN=AOP1 PE=2 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Cellular Component: membrane (GO:0016020);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213); "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN18812_c2_g2_i4 16.00772082 27.58213763 4.433304006 0.16073098 -2.637280069 0.000281434 0.00169073 Down 3.623329 2.943805 2.307834 0.2600987 0.6030409 0.2885642 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18827_c0_g1_i1 32.01147439 17.27654022 46.74640855 2.705773722 1.436041195 0.009106855 0.035256927 Up 0.7887838 0.1774827 1.228483 1.36976 1.234885 2.17368 XP_011076378.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X6 [Sesamum indicum] P0C5E2|LRL12_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.2 PE=2 SV=3 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN18827_c0_g3_i4 129.5997647 62.58401578 196.6155136 3.14162508 1.65151102 2.05E-12 3.85E-11 Up 2.952905 3.426714 3.722175 9.137649 7.880998 8.64725 XP_011076378.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X6 [Sesamum indicum] P0C5E2|LRL12_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.2 PE=2 SV=3 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN18827_c0_g4_i1 178.9580415 119.2044001 238.7116828 2.002540866 1.001831684 3.52E-07 3.61E-06 Up 10.64616 9.183529 11.31417 18.73374 17.00872 14.53385 PIN13374.1 Serine/threonine protein kinase [Handroanthus impetiginosus] F4HQ17|LRL14_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.4 PE=2 SV=2 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN18827_c0_g6_i1 3646.023098 2199.350781 5092.695416 2.315544869 1.211351713 2.29E-28 1.20E-26 Up 93.15577 98.26951 100.5526 191.5595 188.035 165.6369 XP_009415162.1 PREDICTED: acidic endochitinase SE2-like [Musa acuminata subsp. malaccensis] P36908|CHIA_CICAR Acidic endochitinase OS=Cicer arietinum OX=3827 PE=2 SV=1 mus:103996072 K01183 E3.2.1.14 chitinase ko00520 Amino sugar and nucleotide sugar metabolism KOG4701 Chitinase [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis G ENOG4111GPA chitinase Biological Process: polysaccharide catabolic process (GO:0000272);|Molecular Function: chitinase activity (GO:0004568);|Cellular Component: extracellular space (GO:0005615);|Biological Process: chitin catabolic process (GO:0006032); PF00704.27 Glycosyl hydrolases family 18 TRINITY_DN18831_c1_g2_i3 32.51915407 44.53882898 20.49947915 0.460260847 -1.119476373 0.012259172 0.045116984 Down 3.454946 2.940891 4.21036 1.389432 1.056652 1.506853 XP_019229910.1 PREDICTED: uncharacterized protein LOC109210888 [Nicotiana attenuata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41114HF PLATZ transcription factor -- PF04640.13 PLATZ transcription factor TRINITY_DN18833_c1_g5_i1 26.52359177 42.67398047 10.37320307 0.243080279 -2.040495243 0.010990421 0.041128456 Down 3.391986 10.65943 6.137032 1.142933 1.685477 1.190875 OMP00608.1 "Golgi SNAP receptor complex, subunit 1 [Corchorus olitorius]" O22151|GOS12_ARATH Golgi SNAP receptor complex member 1-2 OS=Arabidopsis thaliana OX=3702 GN=GOS12 PE=1 SV=2 rcu:8270591 K08495 "GOSR1, GOS1" golgi SNAP receptor complex member 1 ko04130 SNARE interactions in vesicular transport KOG3208 SNARE protein GS28 [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U ENOG410YI1X Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (By similarity) "Cellular Component: Golgi membrane (GO:0000139);|Molecular Function: SNAP receptor activity (GO:0005484);|Cellular Component: endosome (GO:0005768);|Cellular Component: vacuole (GO:0005773);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: Golgi medial cisterna (GO:0005797);|Cellular Component: cis-Golgi network (GO:0005801);|Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: cytosol (GO:0005829);|Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);|Biological Process: vesicle fusion (GO:0006906);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: protein transport (GO:0015031);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: SNARE complex (GO:0031201);|Biological Process: regulation of vesicle targeting, to, from or within Golgi (GO:0048209);" -- -- TRINITY_DN18840_c1_g1_i1 12.88960796 22.44843947 3.330776453 0.148374521 -2.752684723 0.045469748 0.131415274 Down 2.619779 0.1959671 3.188339 0 0.4304688 0.2313201 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18840_c1_g2_i3 27.84182468 47.87492 7.808729366 0.163106891 -2.616110359 1.27E-06 1.20E-05 Down 1.913545 1.95868 1.554599 0.2303525 0.2298815 0.2636182 GAU22483.1 hypothetical protein TSUD_296020 [Trifolium subterraneum] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111K5V Reverse transcriptase (RNA-dependent DNA polymerase) -- PF03372.22 Endonuclease/Exonuclease/phosphatase family TRINITY_DN18843_c0_g1_i1 8.752646434 1.116257443 16.38903543 14.68212868 3.875989247 0.000345576 0.002035122 Up 0 0.4130103 0.3277412 2.484116 2.463552 3.085726 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18843_c1_g1_i2 363.1154791 509.9049734 216.3259848 0.424247646 -1.237021439 7.48E-18 2.14E-16 Down 21.98252 19.26063 22.4686 7.603208 7.402685 6.808442 PIN21664.1 UDP-glucuronosyl and UDP-glucosyl transferase [Handroanthus impetiginosus] Q33DV3|4CGT_ANTMA Chalcone 4'-O-glucosyltransferase OS=Antirrhinum majus OX=4151 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase "Cellular Component: cytoplasm (GO:0005737);|Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);|Biological Process: pigment biosynthetic process (GO:0046148);|Molecular Function: naringenin chalcone 4'-O-glucosyltransferase activity (GO:0102890);|Molecular Function: 2'4'6'34-pentahydroxychalcone 4'-O-glucosyltransferase activity (GO:0102891);" PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN18844_c0_g1_i2 23.9467708 38.10349033 9.790051271 0.256933189 -1.960534836 0.000307869 0.001832798 Down 5.573524 8.425043 9.291733 1.400067 0.7033674 2.673313 XP_020555010.1 receptor-like cytosolic serine/threonine-protein kinase RBK1 [Sesamum indicum] P0DH62|Y4407_SELML Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii OX=88036 GN=SELMODRAFT_444075 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: ATP binding (GO:0005524); -- -- TRINITY_DN18847_c0_g1_i2 166.1727047 225.8556948 106.4897146 0.471494485 -1.084687198 1.00E-07 1.11E-06 Down 14.06827 15.13133 14.5502 5.522418 4.954842 6.202532 EYU43686.1 hypothetical protein MIMGU_mgv1a012746mg [Erythranthe guttata] O81865|P2A01_ARATH Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YIYF Protein PHLOEM protein 2-LIKE Biological Process: response to insect (GO:0009625);|Molecular Function: carbohydrate binding (GO:0030246);|Molecular Function: proteoglycan binding (GO:0043394); -- -- TRINITY_DN18850_c0_g1_i1 111.9319921 168.6887768 55.17520736 0.327082859 -1.61227194 1.20E-10 1.90E-09 Down 4.85233 4.686941 5.250802 1.311968 1.063312 1.517127 XP_023897447.1 uncharacterized protein LOC112009345 [Quercus suber] P93295|M310_ARATH Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); PF13966.5 zinc-binding in reverse transcriptase TRINITY_DN18850_c0_g2_i1 33.43317872 17.33947325 49.5268842 2.856308464 1.51415179 0.00138905 0.006984949 Up 1.309676 2.482798 4.266837 6.359508 5.376776 6.926337 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18858_c0_g1_i6 246.0690982 118.4354382 373.7027582 3.155328876 1.657790383 7.62E-22 2.80E-20 Up 8.716319 7.510425 7.754358 18.82157 20.51062 21.636 AKV71953.1 R2R3-MYB protein [Rehmannia glutinosa] Q9LDR8|MY102_ARATH Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1 sind:105178533 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: defense response (GO:0006952);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);" "PF00249.30,PF13921.5" Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN18859_c0_g2_i2 39.54146737 56.78036999 22.30256475 0.392786534 -1.348182623 0.001810444 0.008813029 Down 4.66443 3.047912 2.652042 0.740297 1.343792 1.202197 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18865_c1_g1_i1 19.5181564 37.10737107 1.928941734 0.051982711 -4.265824324 9.25E-09 1.17E-07 Down 3.326156 3.977267 4.636028 0 0 0.4975318 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18865_c3_g1_i4 54.63288064 75.75830533 33.50745595 0.442294159 -1.176921904 0.000898246 0.004745584 Down 3.205902 2.982089 2.709226 0.7060891 1.212188 1.262435 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18869_c0_g1_i1 81.80094405 39.35540435 124.2464838 3.157037409 1.658571356 1.34E-08 1.67E-07 Up 3.25724 1.814644 2.779476 6.350821 6.400745 7.185573 XP_011070558.1 SEC14 cytosolic factor [Sesamum indicum] Q10137|SEC14_SCHPO Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sec14 PE=4 SV=1 -- -- -- -- -- -- KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins [I] METABOLISM Lipid transport and metabolism S ENOG410Y3Q0 CRAL TRIO domain protein Cellular Component: prospore membrane (GO:0005628);|Cellular Component: nucleus (GO:0005634);|Molecular Function: phosphatidylcholine transporter activity (GO:0008525);|Molecular Function: phosphatidylinositol transporter activity (GO:0008526);|Biological Process: protein transport (GO:0015031);|Biological Process: ascospore formation (GO:0030437);|Biological Process: ascospore-type prospore-specific spindle pole body remodeling (GO:0031322);|Cellular Component: cell division site (GO:0032153);|Cellular Component: growing cell tip (GO:0035838);|Biological Process: Golgi vesicle transport (GO:0048193);|Cellular Component: cell tip (GO:0051286);|Cellular Component: cell pole (GO:0060187);|Biological Process: intermembrane phospholipid transfer (GO:0120010);|Molecular Function: intermembrane phospholipid transfer activity (GO:0120014); "PF00650.19,PF13716.5" CRAL/TRIO domain|Divergent CRAL/TRIO domain TRINITY_DN18870_c0_g1_i1 109.8324891 157.2738933 62.39108501 0.39670338 -1.333867406 1.08E-07 1.19E-06 Down 9.503108 13.53197 11.35559 3.230243 4.087192 3.742511 EYU34565.1 hypothetical protein MIMGU_mgv1a015596mg [Erythranthe guttata] Q9SNE1|ERF11_ARATH Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1 sly:101268529 K09286 EREBP EREBP-like factor -- -- -- -- -- -- -- K ENOG41116MV transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to cold (GO:0009409);|Biological Process: response to bacterium (GO:0009617);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: response to chitin (GO:0010200);|Biological Process: regulation of cell death (GO:0010941);|Biological Process: defense response to bacterium (GO:0042742); PF00847.19 AP2 domain TRINITY_DN18871_c1_g1_i1 200.1847828 129.3368929 271.0326727 2.095555774 1.06733292 1.16E-08 1.45E-07 Up 14.92005 16.62483 15.57428 25.09322 23.16785 31.58897 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18871_c1_g3_i1 9.268633873 17.06723101 1.470036737 0.086132117 -3.5373049 0.00079545 0.004263032 Down 2.579469 4.570797 1.805188 0.6260411 0 3.22E-40 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18871_c2_g1_i1 12.01814984 24.03629968 0 0 #NAME? 6.28E-05 0.000435078 Down 1.891075 6.417472 2.915161 1.63E-95 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18873_c0_g2_i1 17.28698283 24.93823827 9.63572739 0.386383645 -1.371894068 0.034464272 0.105501627 Down 2.725213 2.376954 2.158746 0.8836435 0.7703352 0.6853191 XP_012842079.1 PREDICTED: uncharacterized protein LOC105962328 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZNBY NA -- -- -- TRINITY_DN18877_c0_g1_i1 59.57535888 36.52571906 82.62499869 2.262104643 1.177665669 0.000399727 0.002314981 Up 2.309919 2.701456 2.188173 3.808677 4.408426 4.965437 XP_011072072.1 probable metal-nicotianamine transporter YSL7 [Sesamum indicum] Q9LUN2|YSL5_ARATH Probable metal-nicotianamine transporter YSL5 OS=Arabidopsis thaliana OX=3702 GN=YSL5 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG1297 oligo-peptide transporter Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: transmembrane transport (GO:0055085); PF03169.14 OPT oligopeptide transporter protein TRINITY_DN18880_c0_g1_i2 16.33203004 32.66406008 0 0 #NAME? 5.39E-06 4.57E-05 Down 8.303569 2.423342 4.754429 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18880_c0_g2_i1 74.27679032 148.5535806 0 0 #NAME? 1.05E-46 1.03E-44 Down 4.384136 4.227866 4.702045 0 0 0 XP_013602364.1 PREDICTED: eukaryotic translation initiation factor 6-2 isoform X1 [Brassica oleracea var. oleracea] Q9M060|IF62_ARATH Eukaryotic translation initiation factor 6-2 OS=Arabidopsis thaliana OX=3702 GN=EIF6-2 PE=2 SV=1 sind:105178449 K03264 EIF6 translation initiation factor 6 ko03008 Ribosome biogenesis in eukaryotes KOG3185 Translation initiation factor 6 (eIF-6) [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1976 Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm "Biological Process: ribosomal subunit export from nucleus (GO:0000054);|Molecular Function: translation initiation factor activity (GO:0003743);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Cellular Component: preribosome, large subunit precursor (GO:0030687);|Biological Process: mature ribosome assembly (GO:0042256);|Biological Process: ribosomal large subunit biogenesis (GO:0042273);|Molecular Function: ribosome binding (GO:0043022);|Molecular Function: ribosomal large subunit binding (GO:0043023);|Biological Process: cellular response to abscisic acid stimulus (GO:0071215);|Biological Process: assembly of large subunit precursor of preribosome (GO:1902626);" -- -- TRINITY_DN18880_c0_g4_i2 20.79375818 41.58751635 0 0 #NAME? 3.57E-07 3.67E-06 Down 5.266118 1.622055 5.576846 1.64E-76 2.47E-49 5.82E-51 XP_022848412.1 putative BPI/LBP family protein At1g04970 [Olea europaea var. sylvestris] Q9MAU5|Y1049_ARATH Putative BPI/LBP family protein At1g04970 OS=Arabidopsis thaliana OX=3702 GN=At1g04970 PE=2 SV=1 -- -- -- -- -- -- KOG4160 BPI/LBP/CETP family protein [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms -- -- -- Molecular Function: lipopolysaccharide binding (GO:0001530);|Cellular Component: extracellular space (GO:0005615);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: regulation of gene expression (GO:0010468);|Biological Process: reactive oxygen species biosynthetic process (GO:1903409); -- -- TRINITY_DN18881_c1_g1_i1 3.023379618 6.046759237 0 0 #NAME? 0.01934906 0.065993829 Down 2.125848 1.049999 0.8383338 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18881_c1_g5_i1 13.10139938 26.20279876 0 0 #NAME? 7.60E-09 9.73E-08 Down 1.715533 1.405478 1.79484 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18881_c2_g2_i2 48.14953639 69.30411981 26.99495298 0.389514405 -1.360251413 0.00036423 0.00212869 Down 2.762435 2.310391 1.799932 0.4841702 0.5731766 1.089331 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18881_c3_g1_i1 12.69951202 20.60066817 4.798355875 0.232922342 -2.102079065 0.007881253 0.031214878 Down 4.810832 2.324753 2.977362 1.226514 0.4919734 0.3054285 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18886_c0_g1_i1 18.9236021 37.84720419 0 0 #NAME? 4.39E-06 3.79E-05 Down 5.631194 2.862724 1.702583 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18895_c0_g3_i1 23.15200334 39.21974778 7.084258895 0.180629894 -2.468891416 1.88E-05 0.000144451 Down 3.084267 4.997909 5.383275 0.676589 0.504014 0.7902114 XP_012832772.1 PREDICTED: uncharacterized protein LOC105953643 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z0XV expressed protein -- -- -- TRINITY_DN18900_c0_g1_i1 528.4816306 1056.963261 0 0 #NAME? 1.84E-291 1.77E-288 Down 32.55173 32.19981 33.68351 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18900_c0_g2_i1 228.4100029 456.8200058 0 0 #NAME? 5.88E-136 2.26E-133 Down 40.42699 46.60262 39.21356 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18900_c1_g1_i1 774.7379502 1549.4759 0 0 #NAME? 0 0 Down 25.63444 27.41254 25.59543 0 0 0 XP_016461127.1 PREDICTED: uncharacterized protein LOC107784497 [Nicotiana tabacum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18901_c0_g1_i1 66.84467952 90.21799875 43.47136028 0.481847978 -1.053350044 0.032929539 0.101726593 Down 9.945634 8.011183 7.37464 1.515868 1.994761 6.505285 EYU33571.1 hypothetical protein MIMGU_mgv1a020014mg [Erythranthe guttata] O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF08276.10,PF00954.19" PAN-like domain|S-locus glycoprotein domain TRINITY_DN18901_c1_g1_i3 103.2217397 156.2782465 50.1652328 0.32099946 -1.639357223 4.52E-10 6.70E-09 Down 8.307512 7.820531 7.911686 2.326923 1.845036 2.055257 XP_022847680.1 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Olea europaea var. sylvestris] O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF01453.23,PF00954.19" D-mannose binding lectin|S-locus glycoprotein domain TRINITY_DN18906_c0_g5_i2 37.67280692 51.90887785 23.436736 0.451497643 -1.147209639 0.006088714 0.025064388 Down 9.28197 6.804678 9.857213 3.408591 2.753885 3.240223 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18908_c0_g4_i1 16.2245972 25.02625338 7.422941019 0.296606164 -1.753379514 0.008212346 0.032334376 Down 3.901707 5.260598 6.089381 1.22744 1.261029 1.195419 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18912_c0_g2_i2 33.87441605 51.03130313 16.71752897 0.327593613 -1.610020865 0.000414396 0.002393078 Down 1.621997 2.271421 1.879628 0.6921943 0.3719263 0.4510275 XP_011095058.1 protein ESKIMO 1-like [Sesamum indicum] Q94K00|TBL28_ARATH Protein trichome birefringence-like 28 OS=Arabidopsis thaliana OX=3702 GN=TBL28 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41105MM Pfam:DUF231 Cellular Component: integral component of membrane (GO:0016021);|Biological Process: response to freezing (GO:0050826); -- -- TRINITY_DN18914_c0_g2_i3 30.87719094 61.01936351 0.735018369 0.012045658 -6.375343017 1.66E-17 4.60E-16 Down 8.222207 5.902798 8.24348 0.1759531 2.78E-32 1.23E-23 PIN18377.1 Mitochondrial/chloroplast ribosomal protein L54/L37 [Handroanthus impetiginosus] -- -- sind:105176275 K17435 MRPL54 large subunit ribosomal protein L54 -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18919_c0_g1_i2 52.64691969 71.14521819 34.14862119 0.47998477 -1.058939465 0.002836948 0.013032847 Down 2.681579 4.391235 3.741295 1.382752 1.45237 1.34746 XP_011092605.1 growth-regulating factor 4-like isoform X2 [Sesamum indicum] Q6AWY6|GRF3_ORYSJ Growth-regulating factor 3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF3 PE=3 SV=2 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YFT7 growth-regulating factor "Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: transcription, DNA-templated (GO:0006351);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: developmental process (GO:0032502);" "PF08879.9,PF08880.10" WRC|QLQ TRINITY_DN1891_c0_g1_i1 29.8986729 14.98921957 44.80812622 2.989356852 1.579835128 0.000699719 0.00380342 Up 1.593742 1.677362 0.890427 3.086001 4.074146 2.919645 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18920_c0_g1_i2 85.58099372 56.85022162 114.3117658 2.010753213 1.007736026 0.000245218 0.001493116 Up 4.172475 2.874541 3.348254 6.463109 6.034403 4.227574 PIN24876.1 Reticulon [Handroanthus impetiginosus] Q9M392|RTNLL_ARATH Reticulon-like protein B12 OS=Arabidopsis thaliana OX=3702 GN=RTNLB12 PE=2 SV=1 -- -- -- -- -- -- KOG1792 Reticulon [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U ENOG410XPKH Reticulon Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN18923_c0_g4_i1 255.2626432 367.1381185 143.3871678 0.390553747 -1.356406994 9.18E-16 2.24E-14 Down 12.58869 12.32666 13.31408 4.01518 4.01415 4.014786 XP_011080016.1 cytochrome P450 94A2 [Sesamum indicum] P98188|C94A2_VICSA Cytochrome P450 94A2 OS=Vicia sativa OX=3908 GN=CYP94A2 PE=2 SV=1 sind:105163392 K13407 CYP94A1 fatty acid omega-hydroxylase ko00073 "Cutin, suberine and wax biosynthesis" KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN18926_c0_g2_i8 469.8246167 160.8997414 778.749492 4.83996733 2.274997309 1.40E-64 2.11E-62 Up 11.27807 11.17455 10.32274 41.95186 45.64241 40.19938 XP_012854847.1 PREDICTED: uncharacterized protein LOC105974317 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111ZTB Nuclear transport factor 2 (NTF2) domain -- -- -- TRINITY_DN18930_c1_g2_i6 59.85779725 80.29670722 39.41888728 0.490915364 -1.026453775 0.002225753 0.010546304 Down 6.21846 6.672694 6.036033 2.293586 2.539657 2.669895 PIN22213.1 hypothetical protein CDL12_05062 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111879 NA -- -- -- TRINITY_DN18932_c0_g1_i2 724.1704194 457.3834943 990.9573445 2.166578718 1.115418655 2.44E-25 1.08E-23 Up 23.5493 26.92651 23.78536 42.73487 44.73631 42.33297 XP_011076249.1 sorbitol dehydrogenase [Sesamum indicum] Q9FJ95|DHSO_ARATH Sorbitol dehydrogenase OS=Arabidopsis thaliana OX=3702 GN=SDH PE=1 SV=1 sind:105160529 K00008 "SORD, gutB" L-iditol 2-dehydrogenase ko00040|ko00051 Pentose and glucuronate interconversions|Fructose and mannose metabolism KOG0024 Sorbitol dehydrogenase [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " E COG1063 Dehydrogenase Molecular Function: L-iditol 2-dehydrogenase activity (GO:0003939);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: mitochondrial membrane (GO:0031966); "PF08240.11,PF00107.25,PF16912.4,PF13602.5" Alcohol dehydrogenase GroES-like domain|Zinc-binding dehydrogenase|Glucose dehydrogenase C-terminus|Zinc-binding dehydrogenase TRINITY_DN18939_c2_g2_i1 17.52863148 27.3163763 7.740886665 0.283378973 -1.819195382 0.005652168 0.02352332 Down 4.570444 4.605738 3.707076 1.703467 0.8662209 0.4106227 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18939_c3_g3_i2 55.42759495 16.84939166 94.00579824 5.57918055 2.48005324 1.96E-07 2.08E-06 Up 2.351169 0.3775221 1.962704 4.816682 8.598567 7.574924 KZV14017.1 hypothetical protein F511_44612 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- KOG0504 FOG: Ankyrin repeat [R] POORLY CHARACTERIZED General function prediction only S COG0666 Ankyrin Repeat -- PF13962.5 Domain of unknown function TRINITY_DN18947_c0_g4_i1 10.83099132 16.84007366 4.821908986 0.286335386 -1.804222124 0.027565912 0.088043911 Down 1.629063 2.171166 3.108359 1.005421 0.2184274 0.3749421 KZV35966.1 hypothetical protein F511_31192 [Dorcoceras hygrometricum] Q9FLY0|SARD4_ARATH Protein SAR DEFICIENT 4 OS=Arabidopsis thaliana OX=3702 GN=SARD4 PE=1 SV=1 -- -- -- -- -- -- KOG3007 Mu-crystallin [E] METABOLISM Amino acid transport and metabolism E COG2423 Ornithine Cyclodeaminase "Cellular Component: cytoplasm (GO:0005737);|Biological Process: arginine catabolic process (GO:0006527);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid (GO:0009536);|Biological Process: systemic acquired resistance (GO:0009627);|Molecular Function: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor (GO:0016639);|Biological Process: L-pipecolic acid biosynthetic process (GO:0062034);|Molecular Function: dehydropipecolic acid reductase (GO:0062046);|Biological Process: positive regulation of systemic acquired resistance (GO:1901672);" -- -- TRINITY_DN18947_c0_g5_i1 5.38102539 10.02703241 0.735018369 0.073303679 -3.769970576 0.0090689 0.035139957 Down 0.7498576 1.274908 1.127499 0.2138681 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18952_c3_g6_i1 63.94726947 99.42306798 28.47147097 0.286366852 -1.804063591 6.88E-06 5.74E-05 Down 11.87982 16.38782 9.47186 2.785834 3.672407 2.291519 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18962_c0_g1_i2 92.45727874 29.28512637 155.6294311 5.314282381 2.409874889 1.57E-09 2.18E-08 Up 2.901017 1.627797 1.727775 10.94846 6.494277 9.478753 XP_011080898.1 uncharacterized protein LOC105164048 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YMTZ harpin-induced protein 1 domain containing protein -- PF03168.12 Late embryogenesis abundant protein TRINITY_DN18962_c0_g2_i1 117.6153896 49.12751742 186.1032619 3.78816744 1.9215001 7.86E-15 1.80E-13 Up 4.375641 3.683118 3.959449 9.817725 12.90633 13.93688 XP_011080898.1 uncharacterized protein LOC105164048 [Sesamum indicum] Q6DST1|Y1465_ARATH Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YMTZ harpin-induced protein 1 domain containing protein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); PF03168.12 Late embryogenesis abundant protein TRINITY_DN18966_c0_g1_i3 144.2161251 225.1140572 63.31819289 0.281271608 -1.829964162 5.68E-16 1.41E-14 Down 11.15208 12.17363 12.25247 2.38166 3.347154 2.363294 PIN04707.1 hypothetical protein CDL12_22759 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111BGK NA -- -- -- TRINITY_DN1896_c0_g1_i1 11.73081851 17.8632367 5.598400311 0.313403467 -1.673906956 0.029934924 0.094069645 Down 1.351633 2.609965 3.484706 0 0.9103373 0.9017877 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18973_c0_g1_i1 35.40082221 51.29590853 19.50573588 0.380259097 -1.394945331 0.037615232 0.112933968 Down 5.410817 11.08592 5.009692 3.265397 2.339838 0.9173473 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18976_c0_g1_i1 24.74795725 40.31136083 9.184553659 0.227840328 -2.133904969 0.000138384 0.000891397 Down 6.161129 7.942909 5.290622 1.560524 1.575548 0.5202382 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18978_c0_g1_i1 38.17396164 62.80684688 13.5410764 0.21559873 -2.213579418 0.000439189 0.002514769 Down 8.0534 5.523505 12.01788 2.24098 0 2.130986 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18978_c0_g2_i3 218.5248982 388.1299764 48.91981996 0.126039788 -2.988048861 6.15E-50 6.72E-48 Down 17.71157 19.3325 19.4509 1.583885 1.70882 2.469464 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1897_c0_g1_i1 64.9327545 87.64295229 42.22255672 0.48175644 -1.053624142 0.019831928 0.067342214 Down 18.1312 16.87087 8.637186 4.804328 7.066716 5.003596 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN18981_c0_g1_i2 229.2452239 327.9589016 130.5315462 0.398011902 -1.329116522 7.76E-14 1.64E-12 Down 12.06638 12.40597 12.4104 3.897069 4.314289 3.634354 XP_011088231.2 O-acyltransferase WSD1 isoform X1 [Sesamum indicum] Q93ZR6|WSD1_ARATH O-acyltransferase WSD1 OS=Arabidopsis thaliana OX=3702 GN=WSD1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41101KN Protein of unknown function (DUF1298) Molecular Function: diacylglycerol O-acyltransferase activity (GO:0004144);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: wax biosynthetic process (GO:0010025);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: triglyceride biosynthetic process (GO:0019432);|Molecular Function: long-chain-alcohol O-fatty-acyltransferase activity (GO:0047196);|Molecular Function: arachidoyl-CoA:1-dodecanol O-acyltransferase activity (GO:0102966);|Molecular Function: wax ester synthase activity (GO:0103095); "PF06974.12,PF03007.15" Protein of unknown function (DUF1298)|Wax ester synthase-like Acyl-CoA acyltransferase domain TRINITY_DN18983_c0_g1_i2 424.0667376 187.3284193 660.8050559 3.527521657 1.81865494 4.49E-40 3.61E-38 Up 8.212445 9.126335 8.819895 25.12236 24.72834 24.67204 AHK06058.1 "alpha-amylase, partial [Pogostemon cablin]" P17859|AMYA_VIGMU Alpha-amylase OS=Vigna mungo OX=3915 GN=AMY1.1 PE=2 SV=1 sind:105166249 K01176 "E3.2.1.1, amyA, malS" alpha-amylase ko00500 Starch and sucrose metabolism KOG0471 Alpha-amylase [G] METABOLISM Carbohydrate transport and metabolism G COG0366 "alpha amylase, catalytic" Molecular Function: alpha-amylase activity (GO:0004556);|Molecular Function: calcium ion binding (GO:0005509);|Biological Process: carbohydrate metabolic process (GO:0005975);|Molecular Function: alpha-amylase activity (releasing maltohexaose) (GO:0103025); "PF07821.11,PF00128.23,PF02324.15" "Alpha-amylase C-terminal beta-sheet domain|Alpha amylase, catalytic domain|Glycosyl hydrolase family 70" TRINITY_DN18988_c0_g1_i5 3444.731506 2235.388012 4654.075001 2.081998729 1.057969188 5.93E-54 7.28E-52 Up 129.4927 132.1958 137.1803 215.1064 226.6188 228.6009 XP_020552794.1 endochitinase EP3-like [Sesamum indicum] Q7Y1Z0|CHI5_ORYSJ Chitinase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht5 PE=2 SV=1 sind:105172091 K01183 E3.2.1.14 chitinase ko00520 Amino sugar and nucleotide sugar metabolism KOG4742 Predicted chitinase [R] POORLY CHARACTERIZED General function prediction only G COG3979 chitinase Biological Process: polysaccharide catabolic process (GO:0000272);|Molecular Function: chitinase activity (GO:0004568);|Biological Process: chitin catabolic process (GO:0006032);|Biological Process: defense response (GO:0006952);|Molecular Function: chitin binding (GO:0008061);|Biological Process: cell wall macromolecule catabolic process (GO:0016998); "PF00182.18,PF00187.18" Chitinase class I|Chitin recognition protein TRINITY_DN189_c0_g1_i1 8.531971179 0 17.06394236 Inf Inf 1.68E-06 1.55E-05 Up 0 0 0 1.954998 1.609896 1.573221 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19000_c0_g1_i2 340.3150866 170.5937532 510.03642 2.98977196 1.580035449 9.86E-26 4.47E-24 Up 12.63653 9.328815 14.01584 28.75201 29.14293 29.02935 PIN01802.1 Hismacro and SEC14 domain-containing protein [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG2633 Hismacro and SEC14 domain-containing proteins [BK] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics |Transcription S COG2110 appr-1-p processing domain protein -- PF13716.5 Divergent CRAL/TRIO domain TRINITY_DN19006_c0_g2_i1 16.50894598 26.38234948 6.635542479 0.251514464 -1.991286728 0.002715689 0.01254945 Down 1.657389 2.970607 3.645607 0.3829994 0.9186285 0.3626106 XP_011072085.1 NDR1/HIN1-like protein 13 [Sesamum indicum] Q8LD98|NHL6_ARATH NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YFY3 "harpin-induced protein 1 domain containing protein, expressed" Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: positive regulation of abscisic acid biosynthetic process (GO:0010116);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: response to salt (GO:1902074); -- -- TRINITY_DN19011_c0_g1_i3 173.1538374 102.7373527 243.5703221 2.370805902 1.245377554 6.35E-10 9.24E-09 Up 5.785178 7.9476 7.515025 13.12995 14.15139 13.3499 PIN24488.1 hypothetical protein CDL12_02776 [Handroanthus impetiginosus] Q9SN74|BH047_ARATH Transcription factor bHLH47 OS=Arabidopsis thaliana OX=3702 GN=BHLH47 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YN73 Transcription factor "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: cellular response to iron ion starvation (GO:0010106);|Molecular Function: protein dimerization activity (GO:0046983);|Biological Process: iron ion homeostasis (GO:0055072);" -- -- TRINITY_DN19021_c0_g1_i1 11.19350066 19.44692785 2.940073475 0.15118447 -2.725618147 0.002196165 0.010421517 Down 4.383202 5.325901 2.638668 1.415421 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19028_c1_g1_i1 24.06465197 39.92705496 8.202248977 0.205430853 -2.28327522 5.03E-05 0.000356 Down 5.595451 3.11475 4.79103 0.3547854 0.885933 0.9181131 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19028_c5_g2_i1 7.974926233 15.94985247 0 0 #NAME? 0.000798619 0.004277993 Down 3.922198 4.383557 0.5554613 2.70E-76 1.97E-71 2.37E-07 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19028_c5_g3_i1 153.6456156 55.55905506 251.7321761 4.530893764 2.179795664 1.49E-23 6.00E-22 Up 9.349275 5.26179 5.137543 26.8178 22.44246 22.71613 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19028_c5_g5_i1 20.18670957 38.11352655 2.259892593 0.059293715 -4.075976992 0.000569106 0.003168966 Down 3.146617 1.290666 5.051572 0.2396605 0 0.2572183 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19028_c6_g1_i2 35.16937972 9.415253847 60.92350559 6.470723635 2.693927061 5.34E-09 6.97E-08 Up 1.457499 0.8444623 0.5170191 3.626852 5.673096 5.036549 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19028_c6_g2_i1 18.92698728 2.550804956 35.3031696 13.84001138 3.790773224 4.12E-08 4.80E-07 Up 0.3569237 0.3536231 2.75E-08 2.307311 3.216191 3.070903 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19037_c0_g1_i1 39.8645182 22.76093203 56.96810438 2.50288979 1.323594766 0.001410225 0.00708045 Up 3.266025 2.230609 3.218305 5.863852 5.169438 6.573386 EYU17747.1 hypothetical protein MIMGU_mgv1a019330mg [Erythranthe guttata] P37117|C71A4_SOLME Cytochrome P450 71A4 OS=Solanum melongena OX=4111 GN=CYP71A4 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" -- -- TRINITY_DN19037_c0_g2_i1 30.31526009 17.34919413 43.28132606 2.4947168 1.31887605 0.040889256 0.120733029 Up 4.029398 4.000017 3.140815 3.007674 9.306963 10.01722 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19037_c1_g2_i1 11.63661115 19.19160562 4.081616668 0.212677185 -2.233262816 0.006926188 0.02799648 Down 2.898798 1.992043 2.391588 0.5708837 0.3818418 0.4063363 -- -- Q42716|C71A8_MENPI Cytochrome P450 71A8 OS=Mentha piperita OX=34256 GN=CYP71A8 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" -- -- TRINITY_DN19038_c0_g3_i2 172.9281309 344.7537342 1.102527553 0.003198015 -8.288607658 7.73E-33 4.79E-31 Down 15.79496 20.01927 25.90344 0.1619188 1.32E-31 1.11E-31 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19038_c0_g4_i1 82.90406078 165.8081216 0 0 #NAME? 6.56E-52 7.50E-50 Down 15.3469 16.13785 16.68889 6.49E-15 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19038_c1_g1_i1 5.08056509 10.16113018 0 0 #NAME? 0.048072708 0.137225786 Down 4.313178 0.4177451 0.9460103 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19045_c0_g1_i2 386.6636285 256.137974 517.189283 2.019182376 1.013771223 6.87E-13 1.35E-11 Up 17.0464 14.72287 19.97529 28.13281 25.962 30.33377 PIM99380.1 hypothetical protein CDL12_28128 [Handroanthus impetiginosus] O22160|TL15A_ARATH "Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g44920 PE=1 SV=2" -- -- -- -- -- -- -- -- -- -- -- S ENOG4111W3N Pentapeptide repeat-containing protein Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: chloroplast thylakoid lumen (GO:0009543);|Cellular Component: thylakoid (GO:0009579);|Cellular Component: thylakoid lumen (GO:0031977); "PF00805.21,PF13576.5,PF13599.5" Pentapeptide repeats (8 copies)|Pentapeptide repeats (9 copies)|Pentapeptide repeats (9 copies) TRINITY_DN19046_c0_g2_i1 14.79960599 8.101965613 21.49724636 2.653337152 1.407808006 0.047272404 0.135469458 Up 0.7741948 0.4495917 1.236121 1.887685 1.881403 1.570965 XP_020547769.1 uncharacterized protein LOC105156620 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41123NR NA -- -- -- TRINITY_DN19047_c0_g1_i2 44.34206587 77.51298223 11.17114951 0.144119723 -2.794660313 6.51E-11 1.06E-09 Down 5.13686 4.176446 5.637195 0.7483001 0.3704823 0.6346954 XP_011096877.1 probable ATP-dependent RNA helicase ddx56 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZAXS NA -- PF05553.10 Cotton fibre expressed protein TRINITY_DN1904_c0_g1_i1 15.94209692 23.73396571 8.150228123 0.343399338 -1.542040835 0.049216038 0.139873755 Down 4.851604 2.811088 1.688127 1.421867 0.5993074 0.6737648 XP_015062642.1 "PREDICTED: pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isoform X1 [Solanum pennellii]" Q9SQU6|PP216_ARATH "Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=2 SV=1" -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- "PF13041.5,PF12854.6,PF01535.19,PF13812.5,PF17177.3" PPR repeat family|PPR repeat|PPR repeat|Pentatricopeptide repeat domain|Pentacotripeptide-repeat region of PRORP TRINITY_DN19052_c0_g2_i2 31.33128047 48.12407666 14.53848429 0.302104171 -1.726881991 0.000323331 0.001914645 Down 4.072233 2.703125 2.920891 0.6676166 0.7424401 0.9562642 XP_020554783.1 uncharacterized protein LOC105177191 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41116TG NA -- -- -- TRINITY_DN19056_c3_g4_i1 73.13430664 44.73738375 101.5312295 2.269494124 1.182370753 7.47E-05 0.000509307 Up 8.386352 11.39054 8.159076 21.03945 15.85398 13.9163 XP_022897285.1 uncharacterized protein LOC111410922 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- PF08284.10 Retroviral aspartyl protease TRINITY_DN19060_c1_g1_i1 12.11535665 22.68755991 1.543153387 0.068017601 -3.877948077 2.62E-05 0.000195884 Down 2.007073 1.236447 1.608638 3.73E-68 6.35E-68 0.2649445 KZV36479.1 DNA-directed RNA polymerase III subunit rpc3-like [Dorcoceras hygrometricum] Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 sind:105160471 K03023 "RPC3, POLR3C" DNA-directed RNA polymerase III subunit RPC3 ko00230|ko00240|ko03020 Purine metabolism|Pyrimidine metabolism|RNA polymerase KOG1339 Aspartyl protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " K ENOG410XPVH "DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs" Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Biological Process: proteolysis (GO:0006508);|Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);|Biological Process: regulation of salicylic acid metabolic process (GO:0010337);|Biological Process: protein catabolic process (GO:0030163);|Biological Process: defense response to bacterium (GO:0042742);|Cellular Component: apoplast (GO:0048046); -- -- TRINITY_DN19060_c1_g2_i3 147.9887166 199.9834298 95.99400342 0.480009787 -1.058864275 5.95E-07 5.91E-06 Down 5.160787 6.15018 6.307156 1.63149 2.185744 3.044052 XP_011076160.1 DNA-directed RNA polymerase III subunit rpc3 isoform X2 [Sesamum indicum] -- -- sind:105160471 K03023 "RPC3, POLR3C" DNA-directed RNA polymerase III subunit RPC3 ko00230|ko00240|ko03020 Purine metabolism|Pyrimidine metabolism|RNA polymerase -- -- -- -- -- K ENOG410XPVH "DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs" -- -- -- TRINITY_DN19063_c0_g1_i1 55.18887864 28.33997704 82.03778024 2.89477229 1.533449867 8.05E-06 6.62E-05 Up 2.424666 1.593137 1.263498 3.685286 4.492379 4.030273 XP_011098541.1 probable galacturonosyltransferase-like 10 [Sesamum indicum] Q9LHD2|GATLA_ARATH Probable galacturonosyltransferase-like 10 OS=Arabidopsis thaliana OX=3702 GN=GATL10 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG41106K3 glycosyltransferase 8 domain containing Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: Golgi apparatus (GO:0005794);|Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: pectin biosynthetic process (GO:0045489);|Molecular Function: polygalacturonate 4-alpha-galacturonosyltransferase activity (GO:0047262);|Biological Process: cell wall organization (GO:0071555); PF01501.19 Glycosyl transferase family 8 TRINITY_DN19069_c1_g1_i1 2.547704759 5.095409518 0 0 #NAME? 0.037649784 0.113001631 Down 0.8229473 1.603186 0.6385078 4.46E-91 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19072_c1_g1_i18 39.11160937 54.57486405 23.64835468 0.433319534 -1.206496819 0.011604254 0.043095142 Down 3.962662 4.089721 2.151881 0.7905629 0.9186576 1.921184 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19072_c1_g3_i1 28.07953214 37.7590319 18.40003238 0.487301487 -1.037113471 0.037869274 0.113540289 Down 6.048432 4.076588 5.110241 1.235216 3.520009 1.269028 KDP27584.1 hypothetical protein JCGZ_19589 [Jatropha curcas] Q8H110|XCT_ARATH Protein XAP5 CIRCADIAN TIMEKEEPER OS=Arabidopsis thaliana OX=3702 GN=XCT PE=1 SV=1 jcu:105643781 K13119 "FAM50, XAP5" protein FAM50 -- -- KOG2894 Uncharacterized conserved protein XAP-5 [S] POORLY CHARACTERIZED Function unknown S ENOG410XNXM "Family with sequence similarity 50, member" Cellular Component: nucleus (GO:0005634);|Biological Process: response to blue light (GO:0009637);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: regulation of photomorphogenesis (GO:0010099);|Biological Process: response to red light (GO:0010114);|Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);|Biological Process: regulation of circadian rhythm (GO:0042752);|Biological Process: rhythmic process (GO:0048511); -- -- TRINITY_DN19075_c0_g1_i1 109.2225329 60.93443118 157.5106346 2.584920078 1.370119675 5.26E-06 4.48E-05 Up 1.762986 1.443998 1.383399 3.140449 3.922176 2.468649 XP_011087140.1 G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 isoform X1 [Sesamum indicum] Q25AG3|LERK3_ORYSI G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK3 PE=3 SV=2 -- -- -- -- -- -- -- -- -- -- -- T ENOG410YBN4 G-type lectin S-receptor-like serine threonine-protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: carbohydrate binding (GO:0030246); "PF00069.24,PF07714.16,PF01453.23" Protein kinase domain|Protein tyrosine kinase|D-mannose binding lectin TRINITY_DN19084_c0_g1_i2 260.202933 109.5674363 410.8384297 3.749639889 1.906752048 7.99E-29 4.30E-27 Up 4.515945 5.733889 5.286401 15.86709 14.21459 17.00571 PIN23681.1 hypothetical protein CDL12_03590 [Handroanthus impetiginosus] Q9ZWM9|RAV1_ARATH AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana OX=3702 GN=RAV1 PE=1 SV=1 sind:105161286 K09287 RAV RAV-like factor -- -- -- -- -- -- -- K ENOG4110AU5 AP2 ERF and B3 domain-containing "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to brassinosteroid (GO:0009741);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: negative regulation of flower development (GO:0009910);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Biological Process: leaf development (GO:0048366);|Biological Process: lateral root development (GO:0048527);" "PF02362.20,PF00847.19" B3 DNA binding domain|AP2 domain TRINITY_DN19086_c0_g3_i1 11.74785292 3.880294981 19.61541085 5.055133939 2.337749318 0.002347361 0.011049858 Up 1.384584 0.2230879 0 2.54449 2.28426 1.754183 XP_018852824.1 "PREDICTED: uncharacterized protein LOC109014779, partial [Juglans regia]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19086_c0_g4_i1 11.01885895 0 22.03771791 Inf Inf 4.16E-07 4.23E-06 Up 4.33E-20 4.62E-34 3.40E-14 3.078698 1.002022 2.639397 XP_022844073.1 serpin-ZX-like [Olea europaea var. sylvestris] Q9S7T8|SPZX_ARATH Serpin-ZX OS=Arabidopsis thaliana OX=3702 GN=At1g47710 PE=1 SV=1 -- -- -- -- -- -- KOG2392 Serpin [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms O COG4826 serine-type endopeptidase inhibitor activity Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867);|Molecular Function: cysteine-type endopeptidase inhibitor activity (GO:0004869);|Cellular Component: extracellular space (GO:0005615);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: negative regulation of endopeptidase activity (GO:0010951);|Cellular Component: apoplast (GO:0048046); PF00079.19 Serpin (serine protease inhibitor) TRINITY_DN19086_c0_g5_i1 29.95842227 56.97677106 2.940073475 0.051601265 -4.27644975 1.26E-06 1.19E-05 Down 3.06733 8.033465 6.231589 0.6769202 0.006913859 1.79E-12 XP_012851719.1 PREDICTED: serpin-ZX-like [Erythranthe guttata] Q9S7T8|SPZX_ARATH Serpin-ZX OS=Arabidopsis thaliana OX=3702 GN=At1g47710 PE=1 SV=1 -- -- -- -- -- -- KOG2392 Serpin [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms O COG4826 serine-type endopeptidase inhibitor activity Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867);|Molecular Function: cysteine-type endopeptidase inhibitor activity (GO:0004869);|Cellular Component: extracellular space (GO:0005615);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: negative regulation of endopeptidase activity (GO:0010951);|Cellular Component: apoplast (GO:0048046); PF00079.19 Serpin (serine protease inhibitor) TRINITY_DN19091_c1_g2_i18 65.45992487 122.3578229 8.562026897 0.069975313 -3.837010164 7.75E-23 2.99E-21 Down 5.315906 5.145235 4.474056 0.3015343 0.2496926 0.3239654 XP_012843532.1 PREDICTED: poly(rC)-binding protein 3-like [Erythranthe guttata] -- -- sly:101261855 K13162 PCBP2_3_4 poly(rC)-binding protein 2 -- -- -- -- -- -- -- S ENOG410XNN8 mRNA transport -- -- -- TRINITY_DN19091_c1_g3_i1 17.0496499 31.39878137 2.700518427 0.086007109 -3.539400269 0.020895117 0.070185883 Down 9.020542 4.899693 1.049419 0 0 1.013934 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19091_c1_g4_i4 20.86793533 40.64389101 1.091979655 0.026867006 -5.218020641 8.69E-11 1.39E-09 Down 3.17422 2.744555 3.707357 0.08002604 0.1590797 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19096_c1_g1_i1 9.529752182 19.05950436 0 0 #NAME? 1.39E-06 1.30E-05 Down 4.477573 2.881287 4.144958 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1909_c0_g1_i1 7.85246726 15.70493452 0 0 #NAME? 1.94E-05 0.000149306 Down 2.339739 3.908691 1.323858 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19104_c4_g1_i1 5.322505686 10.64501137 0 0 #NAME? 0.000573168 0.003188683 Down 0.5110172 3.012755 2.745583 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19104_c4_g5_i1 16.54828983 32.71079131 0.385788347 0.011793917 -6.405813285 1.04E-09 1.47E-08 Down 6.049092 4.520589 2.943366 1.97E-63 8.45E-16 0.1884376 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19104_c4_g6_i1 15.19174112 30.021247 0.362235236 0.012065962 -6.372913206 4.74E-09 6.24E-08 Down 1.949418 2.776067 2.474752 0 0.08211358 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19113_c0_g2_i1 18.5948592 27.17383594 10.01588247 0.368585521 -1.439928697 0.030337198 0.095063953 Down 4.34118 7.522144 4.026622 0 2.861337 1.828667 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19117_c0_g1_i1 11.90215505 18.25265669 5.551653406 0.30415591 -1.717117058 0.03494001 0.106667017 Down 2.944586 2.193694 1.495998 0.989956 0.3276794 0.3402425 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19119_c0_g1_i13 62.6069235 83.87338994 41.34045706 0.492891215 -1.020658828 0.001611776 0.007962923 Down 4.69955 3.218571 4.573817 1.994108 1.21214 1.773797 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19119_c0_g4_i1 12.73143156 3.785641773 21.67722136 5.726168153 2.517570037 0.011814841 0.043748353 Up 0.5675047 1.581452 0 1.036897 4.15124 4.849515 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19122_c0_g1_i5 112.4972969 185.1895588 39.80503494 0.214942112 -2.217979926 1.48E-16 3.83E-15 Down 18.41222 19.03067 13.53884 3.361875 2.434229 3.023515 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19123_c0_g2_i1 16.93426808 26.49024405 7.378292113 0.278528657 -1.844102322 0.015091747 0.053633421 Down 5.019967 3.751601 1.746009 0.3066693 1.393593 0.578369 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19124_c1_g3_i1 10.51174294 17.25454092 3.768944971 0.218432063 -2.194743453 0.01137045 0.042348116 Down 1.512099 3.319471 1.946447 0.1361685 0.3924057 0.7237209 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19127_c0_g1_i1 376.8743476 229.2477127 524.5009824 2.287922423 1.194038135 3.32E-17 9.06E-16 Up 6.874968 7.310858 7.436928 13.1664 12.10243 14.71733 XP_011071722.1 calcium-dependent protein kinase 10 [Sesamum indicum] Q9M9V8|CDPKA_ARATH Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 sind:105157120 K13412 CPK calcium-dependent protein kinase ko04626 Plant-pathogen interaction KOG0032 "Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily" [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XRMJ calcium-dependent protein kinase Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: calmodulin-dependent protein kinase activity (GO:0004683);|Molecular Function: calcium ion binding (GO:0005509);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Molecular Function: calcium-dependent protein serine/threonine kinase activity (GO:0009931);|Cellular Component: membrane (GO:0016020);|Biological Process: peptidyl-serine phosphorylation (GO:0018105);|Biological Process: intracellular signal transduction (GO:0035556);|Biological Process: protein autophosphorylation (GO:0046777); "PF00069.24,PF00036.31,PF07714.16,PF13499.5,PF13405.5,PF13202.5,PF13833.5,PF12763.6,PF06293.13,PF14531.5" Protein kinase domain|EF hand|Protein tyrosine kinase|EF-hand domain pair|EF-hand domain|EF hand|EF-hand domain pair|Cytoskeletal-regulatory complex EF hand|Lipopolysaccharide kinase (Kdo/WaaP) family|Kinase-like TRINITY_DN19133_c0_g3_i1 22.40408177 36.62701037 8.181153182 0.223363936 -2.162531829 0.008610207 0.033655657 Down 4.960093 2.319912 2.167922 0.001162501 0.9797479 0.6954119 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19135_c0_g1_i1 21.17016703 30.3244912 12.01584286 0.396242192 -1.335545589 0.018265772 0.062861122 Down 2.384908 1.245606 2.071535 0.5191711 0.3906514 0.9445592 XP_011073463.1 heat stress transcription factor A-6b-like [Sesamum indicum] Q9LUH8|HFA6B_ARATH Heat stress transcription factor A-6b OS=Arabidopsis thaliana OX=3702 GN=HSFA6b PE=2 SV=1 sind:105158409 K09419 HSFF "heat shock transcription factor, other eukaryote" -- -- KOG0627 Heat shock transcription factor [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5169 Transcription factor Molecular Function: RNA polymerase II proximal promoter sequence-specific DNA binding (GO:0000978);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: cellular response to heat (GO:0034605);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription from RNA polymerase II promoter in response to heat stress (GO:0061408); PF00447.16 HSF-type DNA-binding TRINITY_DN19139_c0_g2_i22 58.5885809 88.54117837 28.63598343 0.323419949 -1.628519424 2.61E-06 2.34E-05 Down 2.588604 3.337214 2.819568 0.4772158 0.9480611 0.8763507 PLY70983.1 hypothetical protein LSAT_9X59881 [Lactuca sativa] Q6S4P4|RF2B_ORYSJ Transcription factor RF2b OS=Oryza sativa subsp. japonica OX=39947 GN=RF2b PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YGG3 Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634); -- -- TRINITY_DN19143_c2_g1_i1 5.26863699 10.53727398 0 0 #NAME? 0.000708996 0.003848315 Down 1.033058 2.339918 1.245369 6.97E-73 1.82E-49 6.02E-66 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19143_c3_g1_i3 30.51021202 16.75361735 44.26680669 2.642223811 1.401752676 0.002682128 0.012408259 Up 4.06902 1.450386 2.508039 5.262941 5.768967 6.230889 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19145_c0_g1_i1 207.4398537 115.0569422 299.8227653 2.605864187 1.381761895 4.73E-14 1.01E-12 Up 7.297489 6.355366 5.868825 14.57166 12.87898 13.5595 XP_011089697.1 "peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X1 [Sesamum indicum]" Q0WRJ7|FK202_ARATH "Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP20-2 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- O COG0545 Peptidyl-prolyl cis-trans isomerase Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid lumen (GO:0009543);|Cellular Component: thylakoid (GO:0009579);|Biological Process: photosystem II assembly (GO:0010207);|Molecular Function: oxidoreductase activity (GO:0016491);|Cellular Component: thylakoid lumen (GO:0031977); PF00254.27 FKBP-type peptidyl-prolyl cis-trans isomerase TRINITY_DN19147_c0_g1_i3 72.23384718 97.8768597 46.59083466 0.476014809 -1.070921639 0.000528 0.002962242 Down 2.123755 2.539302 2.114681 0.9259247 1.008688 0.6544205 XP_022854040.1 uncharacterized protein LOC111375444 [Olea europaea var. sylvestris] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111SG9 Reverse transcriptase (RNA-dependent DNA polymerase) Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN19153_c0_g2_i1 15.42200029 23.53073453 7.313266045 0.310796335 -1.685958605 0.015756619 0.055600139 Down 2.368396 1.815694 2.083327 1.047383 0.5677848 0 XP_022879898.1 subtilisin-like protease SBT1.9 [Olea europaea var. sylvestris] Q9FHA4|SBT19_ARATH Subtilisin-like protease SBT1.9 OS=Arabidopsis thaliana OX=3702 GN=SBT1.9 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576);|Biological Process: proteolysis (GO:0006508); PF05922.15 Peptidase inhibitor I9 TRINITY_DN19164_c0_g1_i1 46.5071937 27.5260884 65.488299 2.379135679 1.250437549 0.001146446 0.005890947 Up 0.7407147 0.5417858 0.7915634 1.363548 1.196467 1.429876 PIN15248.1 Glutamate-gated kainate-type ion channel receptor subunit GluR5 [Handroanthus impetiginosus] Q9C5V5|GLR28_ARATH Glutamate receptor 2.8 OS=Arabidopsis thaliana OX=3702 GN=GLR2.8 PE=2 SV=2 sind:105168659 K05387 GRIP "glutamate receptor, ionotropic, plant" -- -- KOG1052 Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [PET] METABOLISM|METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Amino acid transport and metabolism |Signal transduction mechanisms U ENOG410YYDD "Glutamate receptor, ionotropic, delta" Molecular Function: ionotropic glutamate receptor activity (GO:0004970);|Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: intracellular (GO:0005622);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: calcium ion transport (GO:0006816);|Molecular Function: glutamate receptor activity (GO:0008066);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: calcium-mediated signaling (GO:0019722);|Biological Process: cellular response to amino acid stimulus (GO:0071230); "PF01094.27,PF00060.25,PF00497.19,PF10613.8,PF13458.5" "Receptor family ligand binding region|Ligand-gated ion channel|Bacterial extracellular solute-binding proteins, family 3|Ligated ion channel L-glutamate- and glycine-binding site|Periplasmic binding protein" TRINITY_DN19169_c0_g1_i1 565.6215288 300.3186297 830.9244278 2.766809467 1.468223298 8.80E-35 5.87E-33 Up 12.84133 11.80264 11.16773 26.66409 26.19153 27.15799 XP_011080460.1 probable serine/threonine-protein kinase PBL18 isoform X1 [Sesamum indicum] O49840|PBL3_ARATH Probable serine/threonine-protein kinase PBL3 OS=Arabidopsis thaliana OX=3702 GN=PBL3 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN19176_c2_g1_i1 29.04555684 18.63039412 39.46071955 2.118082919 1.082759069 0.026611452 0.085496048 Up 2.256701 0.3476501 1.758223 2.202677 2.427943 2.838958 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19176_c4_g2_i1 19.99859472 37.77139786 2.225791584 0.058927964 -4.084903762 2.62E-08 3.14E-07 Down 1.697949 2.306128 1.213104 0.04654376 0.1372928 0.1026571 XP_012829311.1 PREDICTED: putative late blight resistance protein homolog R1B-17 [Erythranthe guttata] Q6L3N7|R1C3_SOLDE Putative late blight resistance protein homolog R1C-3 OS=Solanum demissum OX=50514 GN=R1C-3 PE=3 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Molecular Function: ADP binding (GO:0043531); PF00931.21 NB-ARC domain TRINITY_DN19176_c5_g1_i1 66.44502618 132.8900524 0 0 #NAME? 7.74E-42 6.53E-40 Down 14.09386 12.08145 13.22229 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19186_c1_g2_i1 57.23199697 77.07071815 37.39327578 0.485181359 -1.043403972 0.002518764 0.011742247 Down 2.068871 2.934408 2.300199 1.031208 1.057529 0.7666569 PIM98417.1 "DNA polymerase alpha, catalytic subunit [Handroanthus impetiginosus]" O48653|DPOLA_ORYSJ DNA polymerase alpha catalytic subunit OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0868300 PE=2 SV=2 sind:105177609 K02320 POLA1 DNA polymerase alpha subunit A ko00230|ko00240|ko03030 Purine metabolism|Pyrimidine metabolism|DNA replication KOG0970 "DNA polymerase alpha, catalytic subunit" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG0417 DNA polymerase "Molecular Function: nucleoside binding (GO:0001882);|Molecular Function: DNA replication origin binding (GO:0003688);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: DNA primase activity (GO:0003896);|Cellular Component: nucleus (GO:0005634);|Cellular Component: alpha DNA polymerase:primase complex (GO:0005658);|Biological Process: DNA replication initiation (GO:0006270);|Biological Process: leading strand elongation (GO:0006272);|Biological Process: lagging strand elongation (GO:0006273);|Biological Process: double-strand break repair via nonhomologous end joining (GO:0006303);|Biological Process: leaf morphogenesis (GO:0009965);|Molecular Function: purine nucleotide binding (GO:0017076);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein heterodimerization activity (GO:0046982);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);|Biological Process: mitotic DNA replication initiation (GO:1902975);|Biological Process: synthesis of RNA primer involved in mitotic DNA replication (GO:1902981);" "PF00136.20,PF08996.9" DNA polymerase family B|DNA Polymerase alpha zinc finger TRINITY_DN19186_c1_g3_i1 35.81166316 49.31794493 22.30538138 0.452277187 -1.144720868 0.008082604 0.031898247 Down 1.962386 1.068656 1.772369 0.5531708 0.6086524 0.6265938 PIM98417.1 "DNA polymerase alpha, catalytic subunit [Handroanthus impetiginosus]" O48653|DPOLA_ORYSJ DNA polymerase alpha catalytic subunit OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0868300 PE=2 SV=2 sind:105177609 K02320 POLA1 DNA polymerase alpha subunit A ko00230|ko00240|ko03030 Purine metabolism|Pyrimidine metabolism|DNA replication KOG0970 "DNA polymerase alpha, catalytic subunit" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG0417 DNA polymerase "Molecular Function: nucleoside binding (GO:0001882);|Molecular Function: DNA replication origin binding (GO:0003688);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: DNA primase activity (GO:0003896);|Cellular Component: nucleus (GO:0005634);|Cellular Component: alpha DNA polymerase:primase complex (GO:0005658);|Biological Process: DNA replication initiation (GO:0006270);|Biological Process: leading strand elongation (GO:0006272);|Biological Process: lagging strand elongation (GO:0006273);|Biological Process: double-strand break repair via nonhomologous end joining (GO:0006303);|Biological Process: leaf morphogenesis (GO:0009965);|Molecular Function: purine nucleotide binding (GO:0017076);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein heterodimerization activity (GO:0046982);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);|Biological Process: mitotic DNA replication initiation (GO:1902975);|Biological Process: synthesis of RNA primer involved in mitotic DNA replication (GO:1902981);" "PF12254.7,PF03104.18" "DNA polymerase alpha subunit p180 N terminal|DNA polymerase family B, exonuclease domain" TRINITY_DN19191_c0_g3_i1 38.60396075 60.00672711 17.20119438 0.286654434 -1.802615501 0.007791276 0.030936792 Down 6.040199 6.580339 2.596703 1.520354 1.789759 0.2558913 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19192_c0_g2_i1 4.803602672 9.607205345 0 0 #NAME? 0.001491593 0.007440427 Down 1.917458 2.350826 1.124561 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19205_c1_g3_i3 103.8272004 39.28103445 168.3733663 4.286378113 2.09975912 6.09E-05 0.000422667 Up 2.518751 2.438588 12.14882 24.8395 19.75007 14.98976 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19205_c1_g4_i1 324.0731245 166.5783966 481.5678523 2.890938214 1.531537776 3.64E-21 1.30E-19 Up 35.6241 27.10157 32.91458 72.37706 83.04978 67.42619 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19205_c1_g5_i1 279.1336953 153.8901767 404.3772138 2.627699976 1.393800562 4.85E-05 0.000344195 Up 25.63967 14.17649 20.1754 31.46183 42.46859 53.81761 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19212_c0_g1_i2 88.14300128 174.02611 2.259892593 0.01298594 -6.26690576 8.87E-20 2.86E-18 Down 8.463899 11.44332 15.09227 0.1768564 0.02367481 0.1648818 XP_023872068.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Quercus suber] Q9M2N5|DSLE_ARATH Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN19212_c0_g2_i1 77.51775011 145.8147476 9.220752666 0.063236077 -3.983108311 7.88E-28 4.00E-26 Down 22.58464 23.29068 20.80359 1.23E-37 2.351415 0.9921932 XP_024982931.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cynara cardunculus var. scolymus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111T8J transposon protein -- -- -- TRINITY_DN19215_c0_g1_i1 276.1333562 390.4394187 161.8272937 0.414474784 -1.270643762 5.56E-15 1.28E-13 Down 14.79428 14.85277 15.48253 5.492736 4.880832 4.719738 XP_020549912.1 sugar transporter ERD6-like 7 [Sesamum indicum] P93051|ERDL7_ARATH Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana OX=3702 GN=At2g48020 PE=2 SV=2 sind:105163214 K08145 "SLC2A8, GLUT8" "MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8" -- -- KOG0254 Predicted transporter (major facilitator superfamily) [R] POORLY CHARACTERIZED General function prediction only G ENOG410XNQK Transporter Molecular Function: carbohydrate:proton symporter activity (GO:0005351);|Molecular Function: glucose transmembrane transporter activity (GO:0005355);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: integral component of plasma membrane (GO:0005887);|Biological Process: zinc ion transport (GO:0006829);|Biological Process: hexose transmembrane transport (GO:0008645);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plant-type vacuole membrane (GO:0009705); "PF00083.23,PF07690.15" Sugar (and other) transporter|Major Facilitator Superfamily TRINITY_DN19222_c0_g1_i4 136.1746833 207.6428329 64.70653373 0.31162421 -1.682120775 1.16E-09 1.63E-08 Down 6.667043 4.923129 7.310434 1.81314 1.32367 1.609279 XP_021861260.1 uncharacterized protein LOC110800263 [Spinacia oleracea] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z0Y2 transposon protein -- -- -- TRINITY_DN19226_c0_g1_i2 54.50797609 26.61066275 82.40528943 3.096701882 1.630732502 6.43E-06 5.38E-05 Up 1.567168 1.063694 2.012877 3.549851 4.242881 3.807402 PIN01093.1 hypothetical protein CDL12_26397 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YCBS Expp1 protein -- -- -- TRINITY_DN19243_c0_g1_i2 21.45419399 42.54615274 0.362235236 0.008513936 -6.875957984 6.16E-13 1.21E-11 Down 2.447492 2.081584 3.262813 2.58E-06 0.03502036 2.36E-26 KZV50469.1 syntaxin-112-like [Dorcoceras hygrometricum] Q9ZPV9|SY112_ARATH Syntaxin-112 OS=Arabidopsis thaliana OX=3702 GN=SYP112 PE=2 SV=2 sot:102590179 K08486 STX1B_2_3 syntaxin 1B/2/3 ko04130 SNARE interactions in vesicular transport KOG0810 SNARE protein Syntaxin 1 and related proteins [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U COG5074 SYNtaxin Molecular Function: SNARE binding (GO:0000149);|Molecular Function: SNAP receptor activity (GO:0005484);|Cellular Component: nucleus (GO:0005634);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: intracellular protein transport (GO:0006886);|Biological Process: exocytosis (GO:0006887);|Biological Process: vesicle fusion (GO:0006906);|Biological Process: response to cold (GO:0009409);|Cellular Component: endomembrane system (GO:0012505);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: SNARE complex (GO:0031201);|Biological Process: vesicle docking (GO:0048278); "PF00804.24,PF05739.18" Syntaxin|SNARE domain TRINITY_DN19246_c0_g1_i3 264.5838196 529.1676393 0 0 #NAME? 2.90E-156 1.43E-153 Down 19.29815 18.99118 19.59673 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19246_c0_g2_i1 22.74918434 43.95521529 1.543153387 0.035107401 -4.832080976 3.72E-11 6.23E-10 Down 3.749 2.552444 4.201381 0 0 0.2881702 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19258_c0_g6_i1 178.517438 357.0348759 0 0 #NAME? 1.54E-107 4.31E-105 Down 36.01482 35.14131 28.79476 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19258_c0_g8_i1 19.25950328 34.14054005 4.378466519 0.128248309 -2.962988295 0.000127194 0.000825527 Down 3.145174 4.058353 7.092203 0.7653551 0.7736998 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19260_c2_g2_i1 9.547261362 18.32294603 0.771576693 0.04210986 -4.569698108 0.000111556 0.000732406 Down 3.293364 1.058371 2.334158 0 0 0.2808636 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19260_c2_g3_i2 21.77228542 0.312089676 43.23248116 138.5258292 7.114011193 2.17E-14 4.76E-13 Up 0 0.1385428 0.02484686 3.711488 3.400947 4.506071 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19260_c3_g1_i3 214.0286218 119.6707127 308.3865308 2.576959088 1.365669633 4.03E-14 8.68E-13 Up 5.343949 4.165194 4.209963 9.375815 9.533066 9.66006 BAF96581.1 lignan glucosyltransferase [Sesamum alatum] Q2V6K0|UFOG6_FRAAN UDP-glucose flavonoid 3-O-glucosyltransferase 6 OS=Fragaria ananassa OX=3747 GN=GT6 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: flavonol 3-O-glucosyltransferase activity (GO:0047893);|Molecular Function: daphnetin 3-O-glucosyltransferase activity (GO:0102360);|Molecular Function: myricetin 3-O-glucosyltransferase activity (GO:0102425); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN19266_c0_g1_i1 191.0274466 114.2202137 267.8346796 2.344897378 1.229524786 1.27E-10 2.00E-09 Up 4.37347 5.085892 4.891343 8.837935 9.800622 8.508601 XP_012857277.1 PREDICTED: zeatin O-xylosyltransferase-like [Erythranthe guttata] P56725|ZOX_PHAVU Zeatin O-xylosyltransferase OS=Phaseolus vulgaris OX=3885 GN=ZOX1 PE=2 SV=1 sind:105162555 K13495 CISZOG cis-zeatin O-glucosyltransferase ko00908 Zeatin biosynthesis KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase "Biological Process: protein glycosylation (GO:0006486);|Biological Process: cytokinin metabolic process (GO:0009690);|Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);|Molecular Function: zeatin O-beta-D-xylosyltransferase activity (GO:0050404);" PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN19268_c0_g1_i1 95.55333874 52.9080799 138.1985976 2.612050898 1.385183009 2.39E-07 2.51E-06 Up 1.979456 2.380959 2.446387 4.389711 5.672594 4.264521 XP_011083653.1 protein HYPER-SENSITIVITY-RELATED 4 [Sesamum indicum] Q8VZG2|HSR4_ARATH Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=HSR4 PE=2 SV=1 sind:105166114 K08900 BCS1 mitochondrial chaperone BCS1 -- -- KOG0743 AAA+-type ATPase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0465 "Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)" Biological Process: response to molecule of bacterial origin (GO:0002237);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial envelope (GO:0005740);|Cellular Component: mitochondrial outer membrane (GO:0005741);|Biological Process: cell death (GO:0008219);|Biological Process: response to UV (GO:0009411);|Biological Process: response to bacterium (GO:0009617);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: salicylic acid mediated signaling pathway (GO:0009863);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887);|Molecular Function: identical protein binding (GO:0042802); "PF14363.5,PF00004.28,PF13191.5" Domain associated at C-terminal with AAA|ATPase family associated with various cellular activities (AAA)|AAA ATPase domain TRINITY_DN19271_c0_g2_i1 21.26203922 35.40326122 7.12081722 0.201134499 -2.313767536 0.000118189 0.000771269 Down 1.710244 2.196347 1.904473 0.238433 0.2347493 0.455191 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19273_c3_g3_i1 57.01506628 32.34685629 81.68327627 2.525230753 1.336415226 0.000105087 0.000693424 Up 0.7111042 1.009272 0.878004 1.538984 1.977643 1.761762 PNT14487.1 hypothetical protein POPTR_010G033600v3 [Populus trichocarpa] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19283_c1_g4_i1 18.12850858 7.409055726 28.84796143 3.893608376 1.961107783 0.002448199 0.011456812 Up 0.872951 0.5486741 0.5499448 1.224201 1.839397 3.09506 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19283_c1_g8_i1 26.45807776 13.25682249 39.65933302 2.991616812 1.580925396 0.031380311 0.097765715 Up 2.559879 0.08276197 5.951461 4.66669 6.162373 9.558518 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN192_c0_g1_i1 12.88824379 22.107029 3.669458577 0.165986057 -2.590866035 0.001418073 0.007112771 Down 3.848444 3.456017 2.777641 0 1.106966 0.27941 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19300_c0_g3_i1 8.362507387 16.72501477 0 0 #NAME? 8.16E-06 6.71E-05 Down 1.020548 0.9336832 0.8055918 0 0 0 BAG73241.1 "heterogeneous nuclear ribonucleoprotein A1, partial [synthetic construct]" O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1 cal:CaO19.5989 K14411 MSI RNA-binding protein Musashi ko03015 mRNA surveillance pathway KOG0118 FOG: RRM domain [R] POORLY CHARACTERIZED General function prediction only S COG0724 Rna-binding protein Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA 3'-UTR binding (GO:0003730);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleoplasm (GO:0005654);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: mRNA cleavage factor complex (GO:0005849);|Biological Process: mRNA polyadenylation (GO:0006378);|Biological Process: mRNA cleavage (GO:0006379);|Cellular Component: ribonucleoprotein complex (GO:1990904); "PF00076.21,PF11627.7,PF16367.4" "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)|Nuclear factor hnRNPA1|RNA recognition motif" TRINITY_DN19300_c0_g5_i1 12.35092784 22.03789558 2.663960102 0.120880875 -3.048342086 0.000355368 0.002085212 Down 4.009568 1.527814 3.091664 0.2803475 0 0.572218 XP_010645368.1 PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2 isoform X2 [Vitis vinifera] P93042|RHD3_ARATH Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RHD3 PE=1 SV=1 -- -- -- -- -- -- KOG2203 GTP-binding protein [R] POORLY CHARACTERIZED General function prediction only -- -- -- Cellular Component: Golgi membrane (GO:0000139);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);|Biological Process: endoplasmic reticulum organization (GO:0007029);|Biological Process: plant-type cell wall biogenesis (GO:0009832);|Biological Process: cell tip growth (GO:0009932);|Biological Process: root epidermal cell differentiation (GO:0010053);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: endoplasmic reticulum membrane fusion (GO:0016320);|Biological Process: actin cytoskeleton organization (GO:0030036);|Biological Process: endoplasmic reticulum inheritance (GO:0048309); -- -- TRINITY_DN19304_c0_g1_i1 303.8371158 454.4346159 153.2396157 0.337209381 -1.568283421 5.62E-23 2.19E-21 Down 17.76894 17.2305 16.29138 5.528448 4.227932 4.181691 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19304_c0_g2_i1 55.24618567 98.24752133 12.24485001 0.124632661 -3.004245909 4.04E-11 6.75E-10 Down 7.402561 12.00745 12.49776 1.458293 0.8700122 0.9703345 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19305_c0_g1_i2 113.023555 193.2191162 32.82799371 0.169900341 -2.557239348 6.95E-22 2.56E-20 Down 7.240988 8.549279 7.716831 1.177915 0.785837 1.278252 XP_011069922.1 AP2-like ethylene-responsive transcription factor AIL5 isoform X2 [Sesamum indicum] Q6PQQ3|AIL5_ARATH AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana OX=3702 GN=AIL5 PE=2 SV=2 sind:105155699 K09285 "OVM, ANT" "AP2-like factor, ANT lineage" -- -- -- -- -- -- -- K ENOG410Y90A Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Biological Process: seed germination (GO:0009845);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: lateral root formation (GO:0010311);|Biological Process: positive regulation of embryonic development (GO:0040019);|Biological Process: root development (GO:0048364);|Biological Process: phyllotactic patterning (GO:0060771);|Biological Process: leaf phyllotactic patterning (GO:0060772);|Biological Process: auxin mediated signaling pathway involved in phyllotactic patterning (GO:0060774); PF00847.19 AP2 domain TRINITY_DN19307_c1_g1_i2 32.3748011 64.02513174 0.724470471 0.011315408 -6.465567619 2.51E-07 2.63E-06 Down 5.185183 12.33302 5.766101 0 0.2037646 6.33E-54 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19307_c1_g2_i3 32.34629717 63.2225576 1.470036737 0.023251776 -5.426515284 2.03E-16 5.22E-15 Down 8.054836 9.324256 6.732416 0.5018999 0 4.55E-48 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19307_c1_g3_i1 17.01295943 34.02591887 0 0 #NAME? 2.65E-11 4.51E-10 Down 5.600877 3.19592 5.05396 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19307_c1_g5_i5 171.9373321 275.792705 68.08195909 0.246859173 -2.01823984 6.49E-22 2.40E-20 Down 17.1772 19.99209 19.26333 4.328626 3.055049 3.874886 XP_012839626.1 "PREDICTED: biotin carboxylase 1, chloroplastic [Erythranthe guttata]" B9HBA8|ACCC1_POPTR "Biotin carboxylase 1, chloroplastic OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_831870 PE=2 SV=1" sind:105156122 K01961 accC "acetyl-CoA carboxylase, biotin carboxylase subunit" ko00061|ko00620|ko00640 Fatty acid biosynthesis|Pyruvate metabolism|Propanoate metabolism KOG0238 "3-Methylcrotonyl-CoA carboxylase, biotin-containing subunit/Propionyl-CoA carboxylase, alpha chain/Acetyl-CoA carboxylase, biotin carboxylase subunit" [IE] METABOLISM|METABOLISM Lipid transport and metabolism |Amino acid transport and metabolism I COG0439 acetyl-CoA carboxylase biotin carboxylase Molecular Function: acetyl-CoA carboxylase activity (GO:0003989);|Molecular Function: biotin carboxylase activity (GO:0004075);|Molecular Function: ATP binding (GO:0005524);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: malonyl-CoA biosynthetic process (GO:2001295); -- -- TRINITY_DN19311_c0_g1_i2 261.8751128 519.707984 4.042241711 0.00777791 -7.00640182 2.18E-137 8.46E-135 Down 12.67865 13.57905 12.90858 0.038919 0.1523858 0.03888144 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19313_c0_g1_i2 61.77763252 83.20484393 40.35042112 0.484952789 -1.04408379 0.001547656 0.007682932 Down 3.562984 2.471431 2.821405 1.273186 0.7285954 1.450359 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19313_c0_g3_i1 42.41662691 84.09823545 0.735018369 0.008739998 -6.838151415 6.90E-13 1.35E-11 Down 3.14532 4.594572 2.188589 0.0666359 8.31E-34 2.09E-18 XP_022874581.1 uncharacterized protein LOC111393326 [Olea europaea var. sylvestris] P25076|CY11_SOLTU "Cytochrome c1-1, heme protein, mitochondrial OS=Solanum tuberosum OX=4113 GN=CYCL PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410YREK Domain-Containing protein Cellular Component: mitochondrial inner membrane (GO:0005743);|Molecular Function: electron transfer activity (GO:0009055);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: heme binding (GO:0020037);|Molecular Function: metal ion binding (GO:0046872);|Cellular Component: respiratory chain (GO:0070469); -- -- TRINITY_DN19320_c0_g1_i1 36.64881823 70.21132969 3.086306774 0.04395739 -4.507750475 0.032822041 0.101493058 Down 32.76312 6.500431 5.811943 1.03E-14 2.65E-08 1.5606 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19320_c1_g4_i3 248.4360894 372.6171157 124.255063 0.333465796 -1.584389306 7.82E-20 2.53E-18 Down 24.11824 27.04032 24.33173 5.984403 7.906375 6.455135 XP_010241041.1 PREDICTED: uncharacterized protein LOC104585763 [Nelumbo nucifera] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- "PF14244.5,PF03732.16" gag-polypeptide of LTR copia-type|Retrotransposon gag protein TRINITY_DN19324_c0_g1_i1 18.69140566 27.53917258 9.843638745 0.35744134 -1.484221596 0.01505713 0.053531353 Down 1.320528 1.968244 2.604352 0.7462715 0.9063173 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19324_c1_g2_i4 26.45316454 52.53881989 0.367509184 0.006995003 -7.159459681 5.86E-16 1.46E-14 Down 3.970326 4.015897 5.119807 0.09284926 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19326_c0_g1_i2 106.0076118 171.5721995 40.44302423 0.235720148 -2.084853018 6.42E-15 1.48E-13 Down 3.89994 4.498319 3.604833 0.8042224 0.7688379 0.7044471 PNX92424.1 retrotransposon-related protein [Trifolium pratense] P0CT41|TF212_SCHPO Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN19328_c0_g1_i12 68.49507427 39.44422522 97.54592332 2.473008984 1.306267481 1.98E-05 0.000152058 Up 1.185479 2.192625 1.033036 3.180125 2.954151 2.637559 XP_011076378.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X6 [Sesamum indicum] Q9C6K9|LRL11_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.1 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF14380.5,PF00069.24" Wall-associated receptor kinase C-terminal|Protein kinase domain TRINITY_DN19328_c0_g4_i1 216.1464756 120.8539847 311.4389666 2.576985502 1.365684421 1.36E-13 2.83E-12 Up 14.52749 15.31105 19.63417 37.0937 29.25899 36.2435 XP_012833297.1 PREDICTED: probable serine/threonine-protein kinase At1g18390 [Erythranthe guttata] Q9C6K9|LRL11_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.1 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN19328_c0_g5_i1 40.72342239 14.72189944 66.72494534 4.532359809 2.180262397 0.001104943 0.005702865 Up 1.551192 4.690904 2.112235 6.902257 8.129644 15.32363 PIN13382.1 Tyrosine kinase [Handroanthus impetiginosus] Q8VYG0|LRL13_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.3 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.3 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN19330_c0_g2_i9 35.8944922 52.23489229 19.55409211 0.374349238 -1.417543278 0.001158548 0.005941698 Down 2.259336 2.373984 2.060654 0.7376268 0.2195678 1.05619 XP_011101028.1 probable serine/threonine-protein kinase At4g35230 [Sesamum indicum] Q944A7|BSK1_ARATH Serine/threonine-protein kinase BSK1 OS=Arabidopsis thaliana OX=3702 GN=BSK1 PE=1 SV=1 sind:105179125 K14500 BSK BR-signaling kinase ko04075 Plant hormone signal transduction -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19338_c0_g2_i2 1271.236242 1933.009814 609.4626702 0.315292072 -1.665239199 1.47E-75 2.78E-73 Down 71.71874 73.63173 74.22828 20.55473 16.7906 18.52995 RAL41733.1 hypothetical protein DM860_008915 [Cuscuta australis] Q9S7C0|HSP7O_ARATH Heat shock 70 kDa protein 14 OS=Arabidopsis thaliana OX=3702 GN=HSP70-14 PE=1 SV=1 -- -- -- -- -- -- KOG0103 "Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0443 Heat shock protein Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to heat (GO:0009408);|Biological Process: response to cadmium ion (GO:0046686); -- -- TRINITY_DN19339_c0_g1_i3 523.5789019 338.7860899 708.371714 2.090911448 1.064131964 1.65E-18 4.90E-17 Up 17.54194 14.27103 14.68333 26.64815 25.83938 25.99416 XP_012857986.1 PREDICTED: ankyrin repeat-containing protein At5g02620-like [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG0666 Ankyrin Repeat -- "PF13962.5,PF12796.6,PF13857.5,PF13637.5,PF13606.5,PF00023.29" Domain of unknown function|Ankyrin repeats (3 copies)|Ankyrin repeats (many copies)|Ankyrin repeats (many copies)|Ankyrin repeat|Ankyrin repeat TRINITY_DN19342_c0_g3_i1 11.5855977 23.1711954 0 0 #NAME? 1.05E-05 8.44E-05 Down 4.758297 2.044418 1.987792 0 0 1.17E-35 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1934_c0_g1_i1 9.729296219 0.492078091 18.96651435 38.54370818 5.268423471 9.89E-06 8.01E-05 Up 0 0 0.2550883 2.108307 3.189433 3.095706 SJX25496.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" Q9XGL4|RL31_CYAPA 60S ribosomal protein L31 OS=Cyanophora paradoxa OX=2762 GN=RPL31 PE=3 SV=1 pop:POPTR_0018s06650g K02910 "RP-L31e, RPL31" large subunit ribosomal protein L31e ko03010 Ribosome KOG0893 60S ribosomal protein L31 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2097 (ribosomal) protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF01198.18 Ribosomal protein L31e TRINITY_DN19350_c1_g1_i4 46.62805107 63.49367873 29.76242341 0.468746244 -1.093120965 0.00395434 0.017312826 Down 1.508432 1.455421 1.486732 0.5784607 0.5008026 0.5946714 XP_011074534.1 uncharacterized protein LOC105159238 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YNHA NA -- -- -- TRINITY_DN19359_c0_g3_i6 44.05339677 60.48403985 27.62275369 0.456694919 -1.130697356 0.003784277 0.01668412 Down 3.302983 2.798234 2.989851 0.9095585 0.9973599 1.437527 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19367_c0_g3_i2 25.75497996 47.43889114 4.071068771 0.085817115 -3.542590791 2.16E-08 2.61E-07 Down 5.668296 5.937458 2.995762 0.2777487 0.4169602 0.3146989 PIN12781.1 "DNA-directed RNA polymerase, subunit RPB7.0 [Handroanthus impetiginosus]" Q9FLM8|NRPBC_ARATH "DNA-directed RNA polymerases II, IV and V subunit 12 OS=Arabidopsis thaliana OX=3702 GN=NRPB12 PE=1 SV=1" sind:105176897 K03009 "RPB12, POLR2K" "DNA-directed RNA polymerases I, II, and III subunit RPABC4" ko03020|ko00230|ko00240 RNA polymerase|Purine metabolism|Pyrimidine metabolism KOG3507 "DNA-directed RNA polymerase, subunit RPB7.0" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG1996 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates "Cellular Component: RNA polymerase IV complex (GO:0000418);|Cellular Component: RNA polymerase V complex (GO:0000419);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-directed 5'-3' RNA polymerase activity (GO:0003899);|Cellular Component: RNA polymerase II, core complex (GO:0005665);|Cellular Component: RNA polymerase III complex (GO:0005666);|Cellular Component: RNA polymerase I complex (GO:0005736);|Biological Process: transcription by RNA polymerase I (GO:0006360);|Biological Process: transcription by RNA polymerase II (GO:0006366);|Biological Process: transcription by RNA polymerase III (GO:0006383);|Molecular Function: metal ion binding (GO:0046872);" -- -- TRINITY_DN19370_c0_g1_i3 170.3862295 57.95603996 282.8164191 4.879843745 2.286834953 2.52E-20 8.40E-19 Up 2.475758 2.420391 2.093912 7.456385 10.36408 9.856803 XP_011075346.1 zeatin O-glucosyltransferase-like [Sesamum indicum] P56725|ZOX_PHAVU Zeatin O-xylosyltransferase OS=Phaseolus vulgaris OX=3885 GN=ZOX1 PE=2 SV=1 sind:105159842 K13495 CISZOG cis-zeatin O-glucosyltransferase ko00908 Zeatin biosynthesis KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase "Biological Process: protein glycosylation (GO:0006486);|Biological Process: cytokinin metabolic process (GO:0009690);|Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);|Molecular Function: zeatin O-beta-D-xylosyltransferase activity (GO:0050404);" PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN19370_c1_g1_i1 209.8346637 285.4800778 134.1892496 0.470047685 -1.089120974 4.13E-09 5.48E-08 Down 12.11679 12.0572 10.25703 4.011281 4.468338 4.585443 XP_012828027.1 PREDICTED: zeatin O-glucosyltransferase-like [Erythranthe guttata] P56725|ZOX_PHAVU Zeatin O-xylosyltransferase OS=Phaseolus vulgaris OX=3885 GN=ZOX1 PE=2 SV=1 sind:105162555 K13495 CISZOG cis-zeatin O-glucosyltransferase ko00908 Zeatin biosynthesis KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase "Biological Process: protein glycosylation (GO:0006486);|Biological Process: cytokinin metabolic process (GO:0009690);|Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);|Molecular Function: zeatin O-beta-D-xylosyltransferase activity (GO:0050404);" PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN19371_c0_g1_i1 591.790908 291.6189336 891.9628823 3.058659022 1.612899285 5.87E-42 4.96E-40 Up 23.28114 24.48692 25.11114 58.59736 59.64277 61.72883 XP_011077231.1 peptidyl-prolyl cis-trans isomerase CYP19-3 [Sesamum indicum] Q38867|CP19C_ARATH Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana OX=3702 GN=CYP19-3 PE=2 SV=2 -- -- -- -- -- -- KOG0865 Cyclophilin type peptidyl-prolyl cis-trans isomerase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0652 peptidyl-prolyl cis-trans isomerase activity Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: cytosol (GO:0005829);|Biological Process: protein folding (GO:0006457);|Biological Process: signal transduction (GO:0007165);|Molecular Function: cyclosporin A binding (GO:0016018);|Biological Process: response to cadmium ion (GO:0046686);|Molecular Function: unfolded protein binding (GO:0051082); PF00160.20 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TRINITY_DN19374_c0_g1_i1 9.277532381 3.02936116 15.5257036 5.125075151 2.35757316 0.008784513 0.03420151 Up 0.4146069 0.608891 0.1580208 1.232107 2.430499 1.456606 PIN22658.1 Cytochrome P450 CYP2 subfamily [Handroanthus impetiginosus] Q9LIP4|C71BX_ARATH Cytochrome P450 71B36 OS=Arabidopsis thaliana OX=3702 GN=CYP71B36 PE=3 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN19374_c2_g2_i2 507.8589951 238.8532369 776.8647532 3.252477392 1.701539029 1.88E-40 1.53E-38 Up 7.861933 8.382219 10.10172 23.03072 22.90011 23.23816 AJD25153.1 cytochrome P450 CYP71AT89 [Salvia miltiorrhiza] O65782|C83B1_ARATH Cytochrome P450 83B1 OS=Arabidopsis thaliana OX=3702 GN=CYP83B1 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Biological Process: tryptophan biosynthetic process (GO:0000162);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: shade avoidance (GO:0009641);|Biological Process: induced systemic resistance (GO:0009682);|Biological Process: indoleacetic acid biosynthetic process (GO:0009684);|Biological Process: indole glucosinolate biosynthetic process (GO:0009759);|Biological Process: response to red light (GO:0010114);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);|Biological Process: regulation of growth (GO:0040008);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: adventitious root development (GO:0048830);|Biological Process: defense response by callose deposition in cell wall (GO:0052544);" PF00067.21 Cytochrome P450 TRINITY_DN19378_c0_g1_i1 164.9564352 328.8103428 1.102527553 0.003353081 -8.220297159 5.16E-70 8.77E-68 Down 37.70672 28.17475 34.09357 0.2587114 6.84E-27 2.84E-61 XP_012832876.1 PREDICTED: uncharacterized protein LOC105953739 [Erythranthe guttata] F2VYU4|PIK1_ORYSJ Disease resistance protein Pik-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PIK-1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZCT8 NA "Molecular Function: ATP binding (GO:0005524);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: defense response signaling pathway, resistance gene-dependent (GO:0009870);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: ADP binding (GO:0043531);" -- -- TRINITY_DN19378_c0_g2_i6 372.4820619 599.5216694 145.4424543 0.242597494 -2.04336345 3.63E-29 1.98E-27 Down 43.79424 56.57022 49.93971 9.025675 10.98508 9.446259 EYU33985.1 hypothetical protein MIMGU_mgv1a016390mg [Erythranthe guttata] F2VYU4|PIK1_ORYSJ Disease resistance protein Pik-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PIK-1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z1J1 NA "Molecular Function: ATP binding (GO:0005524);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: defense response signaling pathway, resistance gene-dependent (GO:0009870);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: ADP binding (GO:0043531);" -- -- TRINITY_DN19378_c0_g3_i1 245.7401748 485.1128298 6.367519689 0.013125853 -6.25144501 4.69E-55 5.89E-53 Down 52.05705 39.71478 39.08365 0.3564646 0.357372 0.6866334 PIN25609.1 Copper chaperone [Handroanthus impetiginosus] F2VYU4|PIK1_ORYSJ Disease resistance protein Pik-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PIK-1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZCT8 NA "Molecular Function: ATP binding (GO:0005524);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: defense response signaling pathway, resistance gene-dependent (GO:0009870);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: ADP binding (GO:0043531);" -- -- TRINITY_DN19379_c0_g2_i1 10.09364359 20.18728719 0 0 #NAME? 2.01E-05 0.000154252 Down 0.8575711 3.343724 3.273927 3.76E-34 0 0 XP_012832108.1 "PREDICTED: probable anion transporter 3, chloroplastic [Erythranthe guttata]" Q7XJR2|ANTR3_ARATH "Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ANTR3 PE=2 SV=2" sot:102580589 K08193 SLC17A "MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other" -- -- KOG2532 Permease of the major facilitator superfamily [G] METABOLISM Carbohydrate transport and metabolism G ENOG410XPWC solute carrier family 17 Molecular Function: inorganic phosphate transmembrane transporter activity (GO:0005315);|Cellular Component: plastid (GO:0009536);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: chloroplast membrane (GO:0031969); -- -- TRINITY_DN19384_c0_g1_i1 4.955596697 0.637701239 9.273492155 14.54206388 3.862160133 0.007662965 0.030488647 Up 0.2632348 0.2527124 0 1.645489 1.303291 1.306491 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19387_c0_g2_i1 10.92173775 18.05870869 3.784766818 0.209581254 -2.254418412 0.007904705 0.031283196 Down 1.616745 3.489932 2.20514 0.4393917 0 0.826993 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19400_c1_g2_i1 249.9506409 99.462425 400.4388569 4.026031508 2.009358463 2.35E-30 1.34E-28 Up 5.652257 4.27756 5.611341 16.82346 15.31701 18.26104 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19400_c2_g1_i1 20.98779955 34.84669131 7.128907802 0.204579188 -2.289268711 0.000150089 0.000959444 Down 6.892811 6.606948 6.634825 1.857861 0 1.441178 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19401_c0_g2_i1 62.94305117 37.68481919 88.20128316 2.340499041 1.226816174 0.003504445 0.015614182 Up 8.019155 4.263738 10.57856 18.19639 10.20819 14.7529 AFH53223.1 "2,3-oxidosqualene cyclase 1 [Ocimum basilicum]" O82140|BAMS1_PANGI Beta-Amyrin Synthase 1 OS=Panax ginseng OX=4054 GN=OSCPNY1 PE=1 SV=1 -- -- -- -- -- -- KOG0497 Oxidosqualene-lanosterol cyclase and related proteins [I] METABOLISM Lipid transport and metabolism I COG1657 Squalene--hopene cyclase Molecular Function: intramolecular transferase activity (GO:0016866); -- -- TRINITY_DN19405_c0_g1_i2 82.33299417 160.9624288 3.703559586 0.023008845 -5.44166762 1.43E-39 1.13E-37 Down 10.00085 8.786648 7.185995 0.07114201 0.2115152 0.1474349 EYU25979.1 hypothetical protein MIMGU_mgv1a009103mg [Erythranthe guttata] Q501F8|WTR32_ARATH WAT1-related protein At4g08300 OS=Arabidopsis thaliana OX=3702 GN=At4g08300 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YAZG auxin-induced protein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); PF00892.19 EamA-like transporter family TRINITY_DN19412_c0_g2_i4 90.90037378 123.1879481 58.61279945 0.475799787 -1.07157347 0.002760303 0.012728406 Down 2.828173 1.865516 2.033737 0.8113462 1.230256 0.5571194 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1941_c0_g1_i1 3.519804994 0 7.039609988 Inf Inf 0.005182959 0.021838862 Up 0 0 0 0.4000048 1.386942 0.9332128 PIN05905.1 Peroxidase [Handroanthus impetiginosus] O81755|PER48_ARATH Putative Peroxidase 48 OS=Arabidopsis thaliana OX=3702 GN=PER48 PE=3 SV=3 sind:105161067 K00430 E1.11.1.7 peroxidase ko00940 Phenylpropanoid biosynthesis -- -- -- -- -- S ENOG410YD1D peroxidase Molecular Function: peroxidase activity (GO:0004601);|Cellular Component: extracellular region (GO:0005576);|Biological Process: response to oxidative stress (GO:0006979);|Molecular Function: heme binding (GO:0020037);|Biological Process: hydrogen peroxide catabolic process (GO:0042744);|Molecular Function: metal ion binding (GO:0046872); PF00141.22 Peroxidase TRINITY_DN19420_c1_g1_i6 9606.775428 16429.9472 2783.603657 0.169422556 -2.561302131 0 0 Down 1096.531 1108.504 1151.479 148.7147 161.6949 148.477 XP_012855601.1 PREDICTED: miraculin-like [Erythranthe guttata] P80691|LSPI_CARPA Latex serine proteinase inhibitor OS=Carica papaya OX=3649 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867);|Cellular Component: extracellular space (GO:0005615); PF00197.17 Trypsin and protease inhibitor TRINITY_DN19420_c1_g2_i2 5186.303439 9261.90612 1110.700757 0.119921401 -3.059838953 0 0 Down 605.8507 621.3694 594.5095 57.28635 66.4248 52.42813 EYU22302.1 hypothetical protein MIMGU_mgv1a013790mg [Erythranthe guttata] P32765|ASP_THECC 21 kDa seed protein OS=Theobroma cacao OX=3641 GN=ASP PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111AS0 STI Molecular Function: endopeptidase inhibitor activity (GO:0004866); PF00197.17 Trypsin and protease inhibitor TRINITY_DN19420_c1_g3_i2 12517.14288 24335.77713 698.5086327 0.028702952 -5.12265709 0 0 Down 1604.224 1610.436 1625.123 37.5649 40.63923 33.84657 XP_012855601.1 PREDICTED: miraculin-like [Erythranthe guttata] P13087|MIRA_SYNDU Miraculin OS=Synsepalum dulcificum OX=3743 PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00197.17 Trypsin and protease inhibitor TRINITY_DN19420_c1_g4_i1 341.5606514 680.9478914 2.173411413 0.003191744 -8.291439299 1.23E-185 7.97E-183 Down 65.38008 62.69225 56.85908 0 0.4483407 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19420_c1_g6_i1 15.27539043 22.86754832 7.683232545 0.335988469 -1.573516375 0.023930963 0.078376493 Down 3.256906 1.81778 2.737035 0.9727538 0.9975532 0.1233546 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19420_c2_g1_i1 94.39305991 187.3319049 1.454214891 0.007762772 -7.009212345 1.31E-52 1.53E-50 Down 14.83272 19.69204 15.43256 0.07745814 0.2336569 0 XP_022743286.1 kunitz trypsin inhibitor 2-like [Durio zibethinus] P13087|MIRA_SYNDU Miraculin OS=Synsepalum dulcificum OX=3743 PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00197.17 Trypsin and protease inhibitor TRINITY_DN19424_c2_g1_i1 24.96553909 3.341450836 46.58962735 13.94293367 3.801462239 3.76E-10 5.63E-09 Up 0.1556643 0.3030026 0.07882312 2.018601 1.639672 2.287649 XP_011088346.1 UPF0496 protein At4g34320 [Sesamum indicum] Q9SYZ7|U496A_ARATH UPF0496 protein At4g34320 OS=Arabidopsis thaliana OX=3702 GN=At4g34320 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111FCE UPF0496 protein Cellular Component: integral component of membrane (GO:0016021); "PF05055.11,PF05633.10" Protein of unknown function (DUF677)|Protein BYPASS1-related TRINITY_DN19430_c0_g1_i1 19.17873851 12.09351847 26.26395855 2.171738407 1.118850336 0.047940999 0.136944544 Up 1.687287 0.8123484 0.6347189 1.802588 2.321749 1.482838 XP_011095751.1 zinc transporter 1-like [Sesamum indicum] O81123|ZIP1_ARATH Zinc transporter 1 OS=Arabidopsis thaliana OX=3702 GN=ZIP1 PE=2 SV=1 sind:105175109 K14709 "SLC39A1_2_3, ZIP1_2_3" "solute carrier family 39 (zinc transporter), member 1/2/3" -- -- KOG1558 Fe2+/Zn2+ regulated transporter [P] METABOLISM Inorganic ion transport and metabolism P ENOG4111GP2 zinc transporter Molecular Function: zinc ion transmembrane transporter activity (GO:0005385);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: zinc ion transmembrane transport (GO:0071577); PF02535.21 ZIP Zinc transporter TRINITY_DN19430_c0_g2_i3 88.87028285 22.82810376 154.9124619 6.786041607 2.762570276 5.20E-20 1.70E-18 Up 1.032024 1.095261 1.672427 6.8185 7.156442 7.072107 XP_011095751.1 zinc transporter 1-like [Sesamum indicum] O81123|ZIP1_ARATH Zinc transporter 1 OS=Arabidopsis thaliana OX=3702 GN=ZIP1 PE=2 SV=1 sind:105175109 K14709 "SLC39A1_2_3, ZIP1_2_3" "solute carrier family 39 (zinc transporter), member 1/2/3" -- -- KOG1558 Fe2+/Zn2+ regulated transporter [P] METABOLISM Inorganic ion transport and metabolism P ENOG4111GP2 zinc transporter Molecular Function: zinc ion transmembrane transporter activity (GO:0005385);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: zinc ion transmembrane transport (GO:0071577); PF02535.21 ZIP Zinc transporter TRINITY_DN19434_c0_g1_i1 839.0344304 1678.068861 0 0 #NAME? 0 0 Down 16.98453 17.17976 17.1431 0 0 0 BAN84686.1 Large protein [Rabies viral vector pHEP5.0-CVSG-mRFP] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF00946.18,PF14318.5" Mononegavirales RNA dependent RNA polymerase|Mononegavirales mRNA-capping region V TRINITY_DN19434_c0_g2_i1 22.69350662 45.38701325 0 0 #NAME? 4.06E-05 0.000292674 Down 3.942716 14.94892 6.094928 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19434_c0_g3_i1 24.89691062 49.79382123 0 0 #NAME? 3.46E-16 8.71E-15 Down 10.25766 6.42471 8.27574 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19439_c2_g1_i1 591.6972473 309.4479971 873.9464976 2.824211195 1.497847978 3.86E-37 2.80E-35 Up 24.8942 22.01734 22.64237 53.58835 52.71818 52.2864 KZV16072.1 hypothetical protein F511_25904 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41113DC NA -- -- -- TRINITY_DN19442_c0_g1_i1 50.07828307 75.1677382 24.98882795 0.332440866 -1.588830357 0.007249792 0.029084384 Down 8.875302 14.13167 6.40948 2.614831 3.939883 1.282676 OVA09894.1 Alpha crystallin/Hsp20 domain [Macleaya cordata] Q943E7|HS16C_ORYSJ 16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9C PE=2 SV=1 sind:105167096 K13993 HSP20 HSP20 family protein ko04141 Protein processing in endoplasmic reticulum KOG0710 Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0071 response to heat Biological Process: response to reactive oxygen species (GO:0000302);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein folding (GO:0006457);|Biological Process: response to heat (GO:0009408);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to hydrogen peroxide (GO:0042542);|Molecular Function: protein self-association (GO:0043621);|Molecular Function: unfolded protein binding (GO:0051082);|Biological Process: protein complex oligomerization (GO:0051259); -- -- TRINITY_DN19442_c0_g2_i10 594.3965751 883.524742 305.2684083 0.345512009 -1.533192241 5.79E-38 4.33E-36 Down 73.60034 80.20973 75.98776 23.43265 21.30942 19.34856 XP_011084988.1 17.3 kDa class I heat shock protein-like [Sesamum indicum] P27396|HSP11_DAUCA 17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1 sind:105167111 K13993 HSP20 HSP20 family protein ko04141 Protein processing in endoplasmic reticulum KOG0710 Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0071 response to heat Cellular Component: cytoplasm (GO:0005737); PF00011.20 Hsp20/alpha crystallin family TRINITY_DN19461_c2_g2_i3 33.49614602 57.30945843 9.682833612 0.16895699 -2.565272054 1.60E-07 1.72E-06 Down 2.977914 3.275193 2.466887 0.4455284 0.290987 0.4532522 PNX66316.1 retrotransposon-related protein [Trifolium pratense] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19461_c2_g4_i1 13.96767341 24.49981002 3.435536796 0.140227079 -2.834163122 0.000241428 0.001471616 Down 2.847817 3.717139 3.46249 0.1963903 4.65E-78 0.8416319 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19461_c2_g5_i1 10.41180888 19.37467682 1.448940942 0.074785296 -3.741101548 0.000196985 0.001225737 Down 2.049712 3.192519 1.972433 0 0.468003 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19461_c2_g8_i1 4.869653303 9.739306605 0 0 #NAME? 0.001410215 0.00708045 Down 2.169525 2.910785 0.8470133 1.21E-77 4.99E-47 1.77E-33 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19462_c0_g2_i2 73.27066578 105.3701295 41.17120203 0.390729348 -1.355758473 9.87E-06 7.99E-05 Down 9.302809 11.18118 8.571578 2.256665 2.567315 4.332362 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19462_c0_g4_i1 27.37175022 42.24926612 12.49423432 0.295726659 -1.75766379 0.012577354 0.046083123 Down 9.584004 8.276759 3.586019 1.008723 3.007365 0.92353 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19462_c0_g5_i1 27.65026198 38.56628245 16.73424151 0.433908597 -1.204536924 0.03212515 0.099743975 Down 4.422906 4.677737 3.94198 0.8230203 0.4073772 3.460435 EYU30782.1 hypothetical protein MIMGU_mgv1a021078mg [Erythranthe guttata] B0ZB57|OMT3_HUMLU Probable O-methyltransferase 3 OS=Humulus lupulus OX=3486 GN=OMT3 PE=2 SV=1 -- -- -- -- -- -- KOG3178 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS7T o-methyltransferase Molecular Function: O-methyltransferase activity (GO:0008171);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN19466_c1_g1_i6 474.445215 277.6600056 671.2304243 2.417454479 1.273488724 3.43E-17 9.36E-16 Up 19.62429 24.36315 17.38946 43.18323 40.64908 35.81409 XP_020548004.1 mitochondrial import receptor subunit TOM9-2-like [Sesamum indicum] Q9FNC9|TOM92_ARATH Mitochondrial import receptor subunit TOM9-2 OS=Arabidopsis thaliana OX=3702 GN=TOM9-2 PE=1 SV=3 spen:107015382 K17769 TOM22 mitochondrial import receptor subunit TOM22 -- -- KOG4111 "Translocase of outer mitochondrial membrane complex, subunit TOM22" [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U ENOG41122K3 mitochondrial import receptor subunit TOM22 Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial outer membrane translocase complex (GO:0005742);|Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: protein targeting to mitochondrion (GO:0006626);|Cellular Component: plastid (GO:0009536);|Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450);|Cellular Component: integral component of membrane (GO:0016021); PF04281.12 Mitochondrial import receptor subunit Tom22 TRINITY_DN19469_c1_g1_i1 14.14406585 28.2881317 0 0 #NAME? 1.57E-09 2.19E-08 Down 2.596023 3.696804 3.862291 0 0 0 XP_011088213.2 probable receptor-like serine/threonine-protein kinase At5g57670 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19487_c0_g1_i5 184.8876551 267.5041477 102.2711625 0.382316175 -1.387161856 1.52E-12 2.89E-11 Down 9.802795 11.03885 11.35649 3.853052 3.267483 2.776477 XP_011075044.1 glutamate dehydrogenase B [Sesamum indicum] Q9LEC8|DHEB_NICPL Glutamate dehydrogenase B OS=Nicotiana plumbaginifolia OX=4092 GN=GDHB PE=2 SV=1 sind:105159631 K00261 "GLUD1_2, gdhA" glutamate dehydrogenase (NAD(P)+) ko00910|ko00250|ko00220 "Nitrogen metabolism|Alanine, aspartate and glutamate metabolism|Arginine biosynthesis" KOG2250 Glutamate/leucine/phenylalanine/valine dehydrogenases [E] METABOLISM Amino acid transport and metabolism E COG0334 "oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor" Molecular Function: glutamate dehydrogenase [NAD(P)+] activity (GO:0004353);|Biological Process: cellular amino acid metabolic process (GO:0006520); "PF02812.17,PF00208.20" "Glu/Leu/Phe/Val dehydrogenase, dimerisation domain|Glutamate/Leucine/Phenylalanine/Valine dehydrogenase" TRINITY_DN1948_c0_g1_i1 14.74931973 29.49863947 0 0 #NAME? 5.85E-06 4.93E-05 Down 6.583404 2.206192 8.966751 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19496_c0_g5_i1 10.16126862 17.77634269 2.546194546 0.143235006 -2.803543974 0.002348849 0.011055712 Down 1.402601 2.219566 2.678531 0.1638391 0.4823986 0 PIN05844.1 Iron/ascorbate family oxidoreductase [Handroanthus impetiginosus] P10967|ACCH3_SOLLC 1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum OX=4081 GN=ACO3 PE=2 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: ethylene biosynthetic process (GO:0009693);|Biological Process: fruit ripening (GO:0009835);|Molecular Function: L-ascorbic acid binding (GO:0031418);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213); PF14226.5 non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN19514_c1_g5_i2 5.384694129 10.76938826 0 0 #NAME? 0.008044077 0.031754483 Down 1.342268 0.2168818 2.928479 4.27E-79 2.36E-85 2.08E-70 XP_022134915.1 kinesin-like protein KIN-12E [Momordica charantia] Q75LL2|KN12G_ORYSJ Kinesin-like protein KIN-12G OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12G PE=3 SV=1 sind:105171152 K10400 KIF15 kinesin family member 15 -- -- -- -- -- -- -- Z COG5059 Kinesin family member Molecular Function: microtubule motor activity (GO:0003777);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: kinesin complex (GO:0005871);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based movement (GO:0007018);|Molecular Function: microtubule binding (GO:0008017);|Molecular Function: ATPase activity (GO:0016887); -- -- TRINITY_DN19519_c1_g1_i14 296.7642258 579.9694553 13.55899624 0.023378811 -5.418654635 3.52E-126 1.18E-123 Down 13.25278 11.82636 14.12643 0.1726822 0.1422202 0.4325796 EYU38009.1 hypothetical protein MIMGU_mgv11b003533mg [Erythranthe guttata] Q9SX98|LHTL8_ARATH Lysine histidine transporter-like 8 OS=Arabidopsis thaliana OX=3702 GN=AATL1 PE=1 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN19522_c0_g1_i2 117.1450731 63.40326423 170.886882 2.695237919 1.430412631 5.00E-09 6.56E-08 Up 4.600997 4.422718 5.361887 10.06475 10.66751 10.56561 PIN26084.1 "Transcription factor, Myb superfamily [Handroanthus impetiginosus]" Q9C9G7|MYB62_ARATH Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1 sind:105160804 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: gibberellin biosynthetic process (GO:0009686);|Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: root morphogenesis (GO:0010015);|Biological Process: negative regulation of gibberellin biosynthetic process (GO:0010373);|Biological Process: cellular response to phosphate starvation (GO:0016036);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Biological Process: phosphate ion homeostasis (GO:0055062);" "PF00249.30,PF13921.5" Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN19527_c0_g1_i5 73.49681817 100.3117652 46.68187115 0.465367857 -1.103556529 0.000284018 0.001704447 Down 4.10828 4.599326 4.308824 1.20792 2.145143 1.536807 XP_011096385.1 GDSL esterase/lipase At5g45960 [Sesamum indicum] Q9FJ40|GDL86_ARATH GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana OX=3702 GN=At5g45960 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG3240 GDSL esterase lipase "Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);" -- -- TRINITY_DN19538_c0_g1_i1 29.8418401 19.73929524 39.94438496 2.02359732 1.016922234 0.027156112 0.086968913 Up 1.184195 2.196389 1.159404 2.067208 3.283606 2.068531 XP_020552559.1 alpha carbonic anhydrase 7 [Sesamum indicum] Q8L817|ATCA7_ARATH Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana OX=3702 GN=ACA7 PE=2 SV=1 sind:105170874 K01674 cah carbonic anhydrase ko00910 Nitrogen metabolism KOG0382 Carbonic anhydrase [R] POORLY CHARACTERIZED General function prediction only P COG3338 Carbonic anhydrase Molecular Function: carbonate dehydratase activity (GO:0004089);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: chloroplast stroma (GO:0009570); PF00194.20 Eukaryotic-type carbonic anhydrase TRINITY_DN19541_c1_g10_i1 16.72359127 26.76980778 6.677374753 0.249436784 -2.003253864 0.002540057 0.011828151 Down 1.763667 1.07968 2.015376 0.1540608 0.45344 0.3406816 PIN26255.1 Hydroxyindole-O-methyltransferase [Handroanthus impetiginosus] Q6VMW0|Q8OMT_MENPI 8-hydroxyquercetin 8-O-methyltransferase OS=Mentha piperita OX=34256 GN=OMT2 PE=1 SV=1 -- -- -- -- -- -- KOG3178 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS7T o-methyltransferase Molecular Function: O-methyltransferase activity (GO:0008171);|Biological Process: flavonoid metabolic process (GO:0009812);|Molecular Function: 8-hydroxyquercitin 8-O-methyltransferase activity (GO:0030761);|Biological Process: methylation (GO:0032259);|Molecular Function: protein dimerization activity (GO:0046983); "PF00891.17,PF08100.10" O-methyltransferase|Dimerisation domain TRINITY_DN19541_c1_g1_i1 30.63260357 41.01583092 20.24937621 0.493696598 -1.01830339 0.024744626 0.080524252 Down 3.116368 3.236211 4.173378 0.7658188 1.244383 2.163831 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19541_c1_g2_i3 21628.01714 32083.10176 11172.93252 0.348249761 -1.521805732 5.31E-161 2.77E-158 Down 1517.095 1549.058 1519.095 439.6078 441.1908 407.2098 PIN26255.1 Hydroxyindole-O-methyltransferase [Handroanthus impetiginosus] Q6VMW0|Q8OMT_MENPI 8-hydroxyquercetin 8-O-methyltransferase OS=Mentha piperita OX=34256 GN=OMT2 PE=1 SV=1 -- -- -- -- -- -- KOG3178 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS7T o-methyltransferase Molecular Function: O-methyltransferase activity (GO:0008171);|Biological Process: flavonoid metabolic process (GO:0009812);|Molecular Function: 8-hydroxyquercitin 8-O-methyltransferase activity (GO:0030761);|Biological Process: methylation (GO:0032259);|Molecular Function: protein dimerization activity (GO:0046983); "PF00891.17,PF08100.10" O-methyltransferase|Dimerisation domain TRINITY_DN19541_c1_g3_i1 265.9391528 464.3992574 67.47904814 0.145303954 -2.782854137 9.53E-20 3.07E-18 Down 66.01681 46.49289 55.30756 5.035083 10.1198 4.605009 XP_020112168.1 flavonoid O-methyltransferase-like protein Os11g0303600 [Ananas comosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19541_c1_g4_i1 19.673767 38.96174565 0.385788347 0.009901721 -6.658104942 7.84E-12 1.40E-10 Down 2.25911 2.747263 3.355126 0 6.72E-70 0.09595498 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19541_c1_g5_i2 182.8772432 297.6619794 68.09250698 0.228757825 -2.128107001 7.08E-20 2.30E-18 Down 18.35429 21.7382 15.93312 4.078661 2.654301 3.552276 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19541_c1_g6_i1 26.20745347 49.80578432 2.609122615 0.052385936 -4.254676653 4.09E-11 6.82E-10 Down 7.616409 5.697847 6.395769 0.5994495 1.18E-92 0.310746 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19541_c1_g7_i1 10.86520634 21.73041267 0 0 #NAME? 2.95E-05 0.000218853 Down 2.206219 5.715367 2.092259 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19541_c1_g8_i2 63.68921832 102.6978544 24.68058222 0.240322277 -2.056957708 0.000221077 0.001359805 Down 10.18338 5.822636 5.412807 1.600393 0.7883551 1.762017 PIN02441.1 Hydroxyindole-O-methyltransferase [Handroanthus impetiginosus] Q6VMW0|Q8OMT_MENPI 8-hydroxyquercetin 8-O-methyltransferase OS=Mentha piperita OX=34256 GN=OMT2 PE=1 SV=1 -- -- -- -- -- -- KOG3178 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS7T o-methyltransferase Molecular Function: O-methyltransferase activity (GO:0008171);|Biological Process: flavonoid metabolic process (GO:0009812);|Molecular Function: 8-hydroxyquercitin 8-O-methyltransferase activity (GO:0030761);|Biological Process: methylation (GO:0032259);|Molecular Function: protein dimerization activity (GO:0046983); PF00891.17 O-methyltransferase TRINITY_DN19541_c1_g9_i1 36.93191534 72.3206773 1.543153387 0.021337651 -5.550454813 3.85E-19 1.19E-17 Down 14.05315 10.34638 12.38627 0 0 0.6332704 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19566_c0_g2_i1 20.25519243 28.27080881 12.23957606 0.432940428 -1.20775957 0.045476761 0.131427173 Down 2.647689 3.213736 1.774465 1.127079 0.7989777 0.8032607 RDX57813.1 "putative 12-oxophytodienoate reductase 11, partial [Mucuna pruriens]" Q8LAH7|OPR1_ARATH 12-oxophytodienoate reductase 1 OS=Arabidopsis thaliana OX=3702 GN=OPR1 PE=1 SV=2 gmx:100790284 K05894 OPR 12-oxophytodienoic acid reductase ko00592 alpha-Linolenic acid metabolism KOG0134 NADH:flavin oxidoreductase/12-oxophytodienoate reductase [CR] METABOLISM|POORLY CHARACTERIZED Energy production and conversion |General function prediction only C COG1902 "NADH flavin oxidoreductase, NADH oxidase" Cellular Component: cytoplasm (GO:0005737);|Molecular Function: FMN binding (GO:0010181);|Molecular Function: 12-oxophytodienoate reductase activity (GO:0016629);|Biological Process: oxylipin biosynthetic process (GO:0031408); -- -- TRINITY_DN19567_c2_g1_i1 78.79506141 50.72588638 106.8642364 2.106700229 1.074985042 0.000820703 0.004385942 Up 10.03824 4.040427 6.470349 9.220871 12.18061 13.59796 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19567_c3_g1_i1 16.16109903 7.483986654 24.8382114 3.318847634 1.730682398 0.009339447 0.036013041 Up 1.681878 0.2705734 1.239347 1.759913 4.045716 2.870335 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19567_c3_g3_i1 105.8065307 54.79610152 156.8169599 2.861826946 1.516936435 1.92E-09 2.65E-08 Up 3.692496 5.387638 3.621934 10.50586 10.19929 8.641377 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19567_c4_g4_i1 17.97547542 35.95095084 0 0 #NAME? 1.00E-09 1.42E-08 Down 2.999342 6.496446 3.826486 0 1.66E-29 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19569_c0_g2_i1 3.767478297 7.534956593 0 0 #NAME? 0.006093565 0.025079808 Down 1.0891 1.634005 1.363517 4.13E-58 6.37E-52 0 CAN71445.1 hypothetical protein VITISV_042489 [Vitis vinifera] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN19571_c0_g1_i1 362.1082809 229.9375398 494.279022 2.14962299 1.104083656 1.57E-14 3.49E-13 Up 13.88849 13.78217 15.37129 23.03554 26.67792 24.96139 XP_011100208.1 "peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Sesamum indicum]" Q9LM71|FKB18_ARATH "Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP18 PE=1 SV=2" -- -- -- -- -- -- KOG0552 FKBP-type peptidyl-prolyl cis-trans isomerase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0545 Peptidyl-prolyl cis-trans isomerase Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid lumen (GO:0009543);|Cellular Component: thylakoid lumen (GO:0031977); PF00254.27 FKBP-type peptidyl-prolyl cis-trans isomerase TRINITY_DN19585_c0_g1_i1 56.55600066 76.77414687 36.33785445 0.473308476 -1.079147337 0.00205635 0.009869306 Down 3.950093 3.783334 3.249393 1.443893 1.480191 1.258509 EYU34800.1 hypothetical protein MIMGU_mgv1a007222mg [Erythranthe guttata] Q67ZU1|LIP2_ARATH Triacylglycerol lipase 2 OS=Arabidopsis thaliana OX=3702 GN=LIP2 PE=2 SV=1 -- -- -- -- -- -- KOG2624 Triglyceride lipase-cholesterol esterase [I] METABOLISM Lipid transport and metabolism S COG0596 Alpha beta hydrolase Biological Process: defense response to insect (GO:0002213);|Molecular Function: triglyceride lipase activity (GO:0004806);|Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: lipase activity (GO:0016298);|Biological Process: cellular lipid metabolic process (GO:0044255); "PF04083.15,PF12146.7,PF00561.19" "Partial alpha/beta-hydrolase lipase region|Serine aminopeptidase, S33|alpha/beta hydrolase fold" TRINITY_DN19587_c0_g1_i1 3.858812457 7.717624913 0 0 #NAME? 0.012897515 0.047123061 Down 0.8227386 0.807245 2.94858 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19592_c0_g1_i1 28.35392315 49.07735324 7.630493057 0.155478903 -2.685209259 0.000728246 0.003942429 Down 4.447427 5.834887 2.42298 4.06E-25 1.501831 0.09612992 XP_012833448.1 PREDICTED: uncharacterized protein LOC105954320 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- -- -- TRINITY_DN19592_c1_g2_i4 78.63411387 108.7565419 48.51168581 0.446057634 -1.164697965 0.001796846 0.008759985 Down 4.786921 4.010342 2.603462 1.241016 1.679784 1.188275 PIM98610.1 Centromere-associated protein HEC1 [Handroanthus impetiginosus] -- -- pxb:103953907 K16572 "TUBGCP5, GCP5" gamma-tubulin complex component 5 -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19593_c0_g3_i1 33.9357844 67.8715688 0 0 #NAME? 2.61E-13 5.29E-12 Down 6.184886 3.560421 3.305921 0 8.75E-97 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19596_c0_g2_i5 293.7202802 467.6424838 119.7980765 0.256174494 -1.964801255 2.48E-33 1.57E-31 Down 24.89282 29.43365 29.0982 6.330194 4.858968 6.057668 PIN02451.1 Copper chaperone [Handroanthus impetiginosus] O81464|HIP24_ARATH Heavy metal-associated isoprenylated plant protein 24 OS=Arabidopsis thaliana OX=3702 GN=HIPP24 PE=1 SV=1 -- -- -- -- -- -- KOG1603 Copper chaperone [P] METABOLISM Inorganic ion transport and metabolism S COG2608 heavy metal transport detoxification protein Biological Process: metal ion transport (GO:0030001);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN19600_c1_g1_i1 130.1711806 218.4901304 41.8522309 0.191552043 -2.38419168 2.29E-19 7.22E-18 Down 25.16398 33.0471 34.06838 3.392378 6.502943 4.456198 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19600_c1_g4_i1 78.38864797 156.7772959 0 0 #NAME? 8.01E-28 4.06E-26 Down 12.53244 17.93482 10.99473 1.32E-63 1.54E-79 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19601_c0_g2_i2 111.293579 57.88799283 164.6991652 2.845135185 1.508497203 1.40E-09 1.96E-08 Up 2.124112 3.405387 2.710971 6.95522 6.249382 5.730851 EYU27351.1 hypothetical protein MIMGU_mgv1a008471mg [Erythranthe guttata] Q9FIA1|GDL87_ARATH GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana OX=3702 GN=At5g55050 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG3240 GDSL esterase lipase Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: lipase activity (GO:0016298); PF00657.21 GDSL-like Lipase/Acylhydrolase TRINITY_DN19604_c0_g1_i1 79.87209606 134.879611 24.86458114 0.184346477 -2.439508247 6.81E-15 1.57E-13 Down 3.847687 3.828419 3.687444 0.4748941 0.6678271 0.563142 XP_011088820.1 putative phospholipid:diacylglycerol acyltransferase 2 [Sesamum indicum] Q9FYC7|PDAT2_ARATH Putative phospholipid:diacylglycerol acyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=PDAT2 PE=3 SV=1 sind:105169966 K00679 E2.3.1.158 phospholipid:diacylglycerol acyltransferase ko00561 Glycerolipid metabolism KOG2369 Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [I] METABOLISM Lipid transport and metabolism S ENOG410Y9CF Acyl-transferase Biological Process: glycerol metabolic process (GO:0006071);|Biological Process: lipid metabolic process (GO:0006629);|Molecular Function: O-acyltransferase activity (GO:0008374);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: phospholipid:diacylglycerol acyltransferase activity (GO:0046027); PF02450.14 Lecithin:cholesterol acyltransferase TRINITY_DN19609_c0_g1_i3 40.40239414 6.616851041 74.18793724 11.21197028 3.48696792 4.23E-14 9.09E-13 Up 0.2112477 0.3748521 0.131775 2.510161 1.987706 1.900189 XP_022853839.1 protein GAMETE EXPRESSED 1 [Olea europaea var. sylvestris] Q681K7|GEX1_ARATH Protein GAMETE EXPRESSED 1 OS=Arabidopsis thaliana OX=3702 GN=GEX1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41121QC NA Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of plasma membrane (GO:0005887);|Biological Process: embryo sac development (GO:0009553);|Biological Process: pollen development (GO:0009555);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Molecular Function: identical protein binding (GO:0042802); -- -- TRINITY_DN19610_c1_g1_i1 15.36328026 29.25652379 1.470036737 0.050246459 -4.314834247 5.76E-07 5.73E-06 Down 3.850549 3.367289 2.647137 0.371261 1.70E-55 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19610_c2_g1_i1 7.096353614 11.93281464 2.259892593 0.189384706 -2.400608265 0.029967719 0.094133601 Down 1.945302 2.240271 1.252331 0.3619519 0 0.3824931 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19610_c2_g2_i1 13.46434666 4.008875753 22.91981756 5.717268125 2.515325951 0.001413858 0.007093196 Up 0.4880018 0.008521193 0.8744291 1.617816 2.890783 1.651449 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19610_c2_g3_i1 5.49645017 10.26842987 0.724470471 0.070553189 -3.8251449 0.007194302 0.028912878 Down 0.9811659 0.9384581 1.863369 9.08E-11 0.2507597 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19610_c2_g6_i1 340.0980843 128.0548872 552.1412814 4.311754855 2.108275156 1.95E-12 3.68E-11 Up 16.58264 16.46726 19.50271 48.16665 60.30495 74.65243 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19610_c3_g1_i2 459.1896213 256.7870773 661.5921653 2.576423129 1.365369549 2.70E-10 4.10E-09 Up 25.89719 22.12645 23.33794 41.50567 47.61142 59.47504 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19614_c1_g1_i1 14.73656977 21.22132703 8.251812516 0.388845264 -1.362731927 0.043182363 0.126153753 Down 2.880857 1.541346 3.522432 0 1.116623 1.469553 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19614_c1_g5_i1 13.87446365 22.12943118 5.619496106 0.253937666 -1.977453692 0.007321897 0.029329585 Down 4.634497 2.586404 3.642475 0.5582823 0.5699039 1.171647 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19615_c0_g5_i1 15.29044044 5.212027208 25.36885368 4.867367853 2.283141811 0.039378346 0.117159419 Up 0.2852038 0.2803924 1.541705 4.44096 0.9279099 2.937625 XP_012842092.1 PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Erythranthe guttata] Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- PF07714.16 Protein tyrosine kinase TRINITY_DN19617_c2_g3_i1 55.17013569 83.61423189 26.72603949 0.319635054 -1.645502461 4.55E-06 3.92E-05 Down 11.60707 10.40162 10.26563 3.757257 2.130134 2.465165 XP_011075105.1 protein trichome birefringence [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19622_c4_g1_i1 19.60663343 39.21326687 0 0 #NAME? 8.68E-13 1.68E-11 Down 2.909882 3.881935 2.093253 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19622_c4_g5_i2 43.93977784 82.02050452 5.859051154 0.071433981 -3.807245667 1.15E-15 2.79E-14 Down 9.625724 14.17706 10.81028 1.526444 0.5167003 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19624_c0_g1_i1 58.21003182 78.84399623 37.57606741 0.476587555 -1.069186815 0.001536993 0.007640861 Down 2.732151 2.873072 3.002009 0.880385 1.204507 1.251335 XP_021285283.1 "glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic-like isoform X1 [Herrania umbratica]" P55242|GLGL2_SOLTU "Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 GN=AGPS2 PE=2 SV=1" tcc:TCM_034083 K00975 glgC glucose-1-phosphate adenylyltransferase ko00520|ko00500 Amino sugar and nucleotide sugar metabolism|Starch and sucrose metabolism KOG1322 GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis G COG0448 "Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans (By similarity)" Molecular Function: ATP binding (GO:0005524);|Biological Process: glycogen biosynthetic process (GO:0005978);|Molecular Function: glucose-1-phosphate adenylyltransferase activity (GO:0008878);|Cellular Component: amyloplast (GO:0009501);|Cellular Component: chloroplast (GO:0009507);|Biological Process: starch biosynthetic process (GO:0019252); PF00483.22 Nucleotidyl transferase TRINITY_DN19624_c0_g2_i1 14.93308219 28.70879935 1.15736504 0.040313948 -4.63257712 2.67E-07 2.78E-06 Down 4.082945 6.220152 3.378426 0 0 0.3872697 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19626_c0_g1_i1 91.64609138 124.3021742 58.99000854 0.474569402 -1.075309008 9.22E-05 0.000615714 Down 8.403524 9.500129 7.642866 3.548592 3.192013 3.002885 XP_021291671.1 RING-H2 finger protein ATL74 [Herrania umbratica] Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1 -- -- -- -- -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Biological Process: pollen development (GO:0009555);|Biological Process: anther dehiscence (GO:0009901);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: stamen development (GO:0048443);|Biological Process: regulation of jasmonic acid biosynthetic process (GO:0080141); "PF13639.5,PF17123.4,PF13923.5,PF12678.6,PF14446.5,PF00097.24,PF12861.6,PF13920.5" "Ring finger domain|RING-like zinc finger|Zinc finger, C3HC4 type (RING finger)|RING-H2 zinc finger domain|Prokaryotic RING finger family 1|Zinc finger, C3HC4 type (RING finger)|Anaphase-promoting complex subunit 11 RING-H2 finger|Zinc finger, C3HC4 type (RING finger)" TRINITY_DN19637_c0_g1_i2 190.4847571 259.2701157 121.6993985 0.46939231 -1.091133888 1.03E-08 1.30E-07 Down 13.82892 13.548 15.33943 5.979685 5.293386 4.93573 EYU28156.1 hypothetical protein MIMGU_mgv1a009322mg [Erythranthe guttata] Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase "Biological Process: leaf senescence (GO:0010150);|Molecular Function: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor (GO:0016682);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213);" "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN19642_c0_g1_i4 30.91506728 61.83013455 0 0 #NAME? 6.94E-20 2.25E-18 Down 4.0615 3.795908 3.285199 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19643_c0_g1_i7 2295.05847 1503.479736 3086.637205 2.052995548 1.037730499 6.61E-44 6.02E-42 Up 69.53769 66.98156 69.82417 112.9223 113.3059 115.6795 PIN01391.1 putative carbonic anhydrase involved in protection against oxidative damage [Handroanthus impetiginosus] P27140|BCA1_ARATH "Beta carbonic anhydrase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCA1 PE=1 SV=2" sind:105177130 K01673 "cynT, can" carbonic anhydrase ko00910 Nitrogen metabolism KOG1578 Predicted carbonic anhydrase involved in protection against oxidative damage [P] METABOLISM Inorganic ion transport and metabolism P COG0288 carbonic anhydrase "Molecular Function: carbonate dehydratase activity (GO:0004089);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: response to cold (GO:0009409);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: thylakoid (GO:0009579);|Biological Process: defense response to fungus, incompatible interaction (GO:0009817);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: response to carbon dioxide (GO:0010037);|Biological Process: regulation of stomatal movement (GO:0010119);|Cellular Component: stromule (GO:0010319);|Biological Process: carbon utilization (GO:0015976);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: membrane (GO:0016020);|Biological Process: defense response to bacterium (GO:0042742);|Cellular Component: apoplast (GO:0048046);|Biological Process: negative regulation of stomatal complex development (GO:2000122);" PF00484.18 Carbonic anhydrase TRINITY_DN19651_c0_g3_i1 21.47395194 42.94790387 0 0 #NAME? 9.36E-06 7.61E-05 Down 3.613027 8.712687 2.756252 1.52E-25 1.06E-38 2.21E-26 XP_012828986.1 "PREDICTED: uncharacterized protein At4g13200, chloroplastic-like [Erythranthe guttata]" Q8LDV3|Y4320_ARATH "Uncharacterized protein At4g13200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g13200 PE=1 SV=2" -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZQ8I NA Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: thylakoid (GO:0009579);|Cellular Component: plastoglobule (GO:0010287); -- -- TRINITY_DN19657_c1_g5_i1 13.5582623 22.54190193 4.574622673 0.202938629 -2.300884589 0.020556784 0.069300714 Down 1.071418 3.292153 1.636343 0.2095974 0 0.7904872 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19663_c1_g1_i6 28.08341826 52.78613722 3.380699309 0.064045211 -3.964765488 6.20E-11 1.01E-09 Down 3.577026 2.673145 2.183675 0.2548192 0 0.2244837 KZV37328.1 hypothetical protein F511_01196 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- K COG1678 UPF0301 protein -- -- -- TRINITY_DN19663_c1_g2_i2 32.83781328 65.67562656 0 0 #NAME? 4.52E-21 1.60E-19 Down 3.725642 4.117628 3.222637 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19663_c1_g3_i2 6.527103951 11.21666198 1.837545922 0.163822885 -2.609791192 0.02353388 0.077271134 Down 0.5573497 2.00679 1.995009 0.5393965 2.47E-93 3.22E-76 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19663_c1_g5_i1 15.03868135 24.11391052 5.96345218 0.247303405 -2.015645991 0.00391709 0.017166294 Down 1.50945 4.128478 3.708675 0.556872 0.553366 0.7112876 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19669_c1_g3_i1 5.705304993 11.41060999 0 0 #NAME? 0.000376308 0.002192216 Down 3.137702 1.153371 2.118585 0 0 0 PIN11214.1 Cytochrome P450 CYP2 subfamily [Handroanthus impetiginosus] O65782|C83B1_ARATH Cytochrome P450 83B1 OS=Arabidopsis thaliana OX=3702 GN=CYP83B1 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Biological Process: tryptophan biosynthetic process (GO:0000162);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: shade avoidance (GO:0009641);|Biological Process: induced systemic resistance (GO:0009682);|Biological Process: indoleacetic acid biosynthetic process (GO:0009684);|Biological Process: indole glucosinolate biosynthetic process (GO:0009759);|Biological Process: response to red light (GO:0010114);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);|Biological Process: regulation of growth (GO:0040008);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: adventitious root development (GO:0048830);|Biological Process: defense response by callose deposition in cell wall (GO:0052544);" -- -- TRINITY_DN19671_c1_g3_i1 142.0007792 195.5375264 88.464032 0.452414601 -1.144282604 2.97E-05 0.000220277 Down 27.08039 32.95909 21.78101 12.47453 7.827841 9.601371 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19671_c2_g1_i1 16.21557945 32.06364971 0.367509184 0.011461864 -6.447014538 0.000112479 0.00073793 Down 2.10572 2.393292 6.158106 0.1186695 0.03447796 5.04E-34 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19672_c0_g2_i4 119.7770295 166.1918325 73.3622265 0.441430998 -1.179740153 0.010549472 0.039770132 Down 19.09177 34.2458 34.33973 3.755733 11.80408 15.87058 PRQ53440.1 putative RNA-directed DNA polymerase [Rosa chinensis] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN19672_c0_g4_i1 20.04753865 35.32836512 4.766712182 0.13492592 -2.889760566 9.54E-06 7.75E-05 Down 2.923298 1.520133 2.442541 0.1020279 0.5074382 0.1030874 XP_015576586.1 uncharacterized protein LOC107261482 [Ricinus communis] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN19674_c0_g1_i5 285.3777648 153.8715059 416.8840237 2.709299693 1.437919988 2.30E-19 7.24E-18 Up 7.769289 7.796568 7.628796 16.27488 18.61925 15.7697 XP_011076755.1 uncharacterized protein LOC105160925 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG1609 Protein involved in mRNA turnover and stability [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification O COG5183 (Membrane-Associated Ring finger (C3HC4)) -- PF12906.6 RING-variant domain TRINITY_DN19676_c0_g1_i1 269.0628499 419.441058 118.6846418 0.282959046 -1.821334833 4.10E-27 2.02E-25 Down 12.32517 11.40778 12.20032 2.691924 2.570248 2.941522 XP_011070210.2 protein NRT1/ PTR FAMILY 3.1-like isoform X1 [Sesamum indicum] Q9SX20|PTR18_ARATH Protein NRT1/ PTR FAMILY 3.1 OS=Arabidopsis thaliana OX=3702 GN=NPF3.1 PE=2 SV=1 sind:105155926 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Biological Process: gibberellic acid homeostasis (GO:0010336);|Molecular Function: peptide:proton symporter activity (GO:0015333);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oligopeptide transmembrane transporter activity (GO:0035673);|Biological Process: nitrate assimilation (GO:0042128);|Cellular Component: intracellular vesicle (GO:0097708);|Molecular Function: peptide transmembrane transporter activity (GO:1904680); "PF00854.20,PF07690.15" POT family|Major Facilitator Superfamily TRINITY_DN19678_c0_g1_i5 54.14983562 75.84164402 32.45802721 0.427971039 -1.224414922 0.000500474 0.002825274 Down 3.484678 5.633362 4.435907 1.902309 1.010288 1.790953 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19681_c6_g2_i1 5.465808039 10.93161608 0 0 #NAME? 0.000464999 0.002647729 Down 1.337337 2.704757 3.184373 1.14E-78 7.14E-84 5.05E-87 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19681_c6_g3_i4 13.86808427 27.73616855 0 0 #NAME? 0.000354601 0.002081255 Down 1.211679 6.066199 2.692463 9.88E-92 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19681_c7_g1_i1 21.42142002 37.01543259 5.827407461 0.157431835 -2.667200794 0.002906449 0.013296961 Down 6.690329 2.91108 9.863829 1.008567 1.491731 6.15E-10 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19683_c0_g1_i4 253.6403821 345.0578528 162.2229113 0.470132501 -1.088860675 1.01E-10 1.61E-09 Down 16.25305 15.53441 15.81064 5.910576 6.283079 5.830406 PIN20386.1 hypothetical protein CDL12_06934 [Handroanthus impetiginosus] Q9SU13|FLA2_ARATH Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- M ENOG410YBWT Fasciclin-like arabinogalactan protein Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: membrane (GO:0016020);|Cellular Component: anchored component of membrane (GO:0031225);|Cellular Component: anchored component of plasma membrane (GO:0046658); PF02469.21 Fasciclin domain TRINITY_DN19689_c0_g1_i1 433.0382638 591.6611003 274.4154273 0.463805086 -1.108409456 5.49E-09 7.15E-08 Down 22.86917 28.06107 20.37551 8.340748 8.879852 9.440054 XP_022895990.1 hippocampus abundant transcript-like protein 1 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG2816 Predicted transporter ADD1 (major facilitator superfamily) [R] POORLY CHARACTERIZED General function prediction only U ENOG41101QS Major Facilitator Superfamily -- PF07690.15 Major Facilitator Superfamily TRINITY_DN19696_c1_g1_i4 30.29785687 40.94865919 19.64705455 0.479797262 -1.059503171 0.024564463 0.080064239 Down 2.173429 1.816665 2.260147 1.226672 0.5772362 0.649156 XP_012829912.1 PREDICTED: putative pentatricopeptide repeat-containing protein At5g43820 [Erythranthe guttata] P0C8R0|PP416_ARATH Putative pentatricopeptide repeat-containing protein At5g43820 OS=Arabidopsis thaliana OX=3702 GN=At5g43820 PE=3 SV=1 -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- "PF13041.5,PF01535.19,PF12854.6,PF13812.5" PPR repeat family|PPR repeat|PPR repeat|Pentatricopeptide repeat domain TRINITY_DN19697_c0_g4_i1 30.26086146 43.23722331 17.28449961 0.399759704 -1.322795038 0.006860663 0.027773661 Down 6.662181 6.302076 5.116073 1.07077 3.593841 1.133059 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19699_c0_g3_i1 271.3879445 523.7358986 19.03999031 0.036354182 -4.781734845 5.79E-108 1.64E-105 Down 13.26295 13.2423 12.64654 0.3950013 0.275833 0.463174 BAV56702.1 transposase [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z498 "CACTA, En Spm sub-class" -- PF13960.5 Domain of unknown function (DUF4218) TRINITY_DN19702_c0_g1_i2 30.61749889 41.07456006 20.16043771 0.490825408 -1.026718161 0.026057935 0.084003113 Down 2.183419 2.156953 2.566193 0.5340783 0.9568073 1.203962 PIN07739.1 hypothetical protein CDL12_19691 [Handroanthus impetiginosus] Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1 -- -- -- -- -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transferase activity (GO:0016740);|Molecular Function: metal ion binding (GO:0046872); "PF13639.5,PF17123.4,PF12678.6,PF13923.5,PF13445.5,PF14634.5,PF14447.5,PF13920.5,PF00097.24" "Ring finger domain|RING-like zinc finger|RING-H2 zinc finger domain|Zinc finger, C3HC4 type (RING finger)|RING-type zinc-finger|zinc-RING finger domain|Prokaryotic RING finger family 4|Zinc finger, C3HC4 type (RING finger)|Zinc finger, C3HC4 type (RING finger)" TRINITY_DN19722_c0_g5_i2 20.33743067 27.96055845 12.7143029 0.454722781 -1.136940812 0.043410936 0.126682907 Down 2.034215 2.286795 4.407817 1.208533 0.6189116 1.33892 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19731_c1_g2_i1 103.0712481 204.9851311 1.15736504 0.005646093 -7.468531484 3.03E-52 3.50E-50 Down 23.59581 17.36461 22.72282 1.21E-66 0 0.2533478 EXB54483.1 Nitrate transporter 1.1 [Morus notabilis] Q05085|PTR7_ARATH Protein NRT1/ PTR FAMILY 6.3 OS=Arabidopsis thaliana OX=3702 GN=NPF6.3 PE=1 SV=1 -- -- -- -- -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Biological Process: oligopeptide transport (GO:0006857);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to herbicide (GO:0009635);|Biological Process: auxin-activated signaling pathway (GO:0009734);|Biological Process: response to nitrate (GO:0010167);|Molecular Function: nitrate transmembrane transporter activity (GO:0015112);|Molecular Function: symporter activity (GO:0015293);|Biological Process: nitrate transport (GO:0015706);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: nitrate assimilation (GO:0042128); -- -- TRINITY_DN19735_c0_g1_i2 67.85546801 90.63442769 45.07650833 0.497344215 -1.007683398 0.008781519 0.034192787 Down 4.143641 4.035491 2.333483 1.593517 1.610952 1.00778 XP_022154487.1 uncharacterized protein LOC111021757 [Momordica charantia] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF14223.5,PF13976.5" gag-polypeptide of LTR copia-type|GAG-pre-integrase domain TRINITY_DN19744_c2_g1_i1 5.844727747 11.68945549 0 0 #NAME? 0.000281873 0.001692694 Down 1.81653 1.764704 2.382761 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19747_c2_g2_i1 18.00391 26.29897595 9.70884404 0.369171943 -1.437635184 0.022282957 0.073982611 Down 2.651891 3.578413 2.655181 0.5668347 0.8577109 1.150688 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19747_c3_g2_i1 13.49074078 26.98148156 0 0 #NAME? 4.22E-09 5.59E-08 Down 5.83941 3.795467 5.969891 0 0 0 XP_013679898.1 uncharacterized protein LOC106384484 [Brassica napus] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN19747_c3_g6_i1 22.55863886 43.64724099 1.470036737 0.033679946 -4.891966347 0.019535998 0.066511481 Down 15.73578 5.060727 1.948739 0.6002132 5.29E-32 5.31E-36 XP_018505957.1 PREDICTED: uncharacterized protein LOC108868100 [Pyrus x bretschneideri] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN19752_c0_g1_i9 151.6032207 202.4211375 100.785304 0.497899109 -1.006074662 2.59E-06 2.32E-05 Down 7.150163 8.529221 7.51147 3.443699 3.224752 2.639504 EYU27049.1 hypothetical protein MIMGU_mgv1a004702mg [Erythranthe guttata] Q9SYD6|DTX42_ARATH Protein DETOXIFICATION 42 OS=Arabidopsis thaliana OX=3702 GN=DTX42 PE=2 SV=2 -- -- -- -- -- -- KOG1347 "Uncharacterized membrane protein, predicted efflux pump" [R] POORLY CHARACTERIZED General function prediction only V COG0534 Mate efflux family protein Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to aluminum ion (GO:0010044);|Molecular Function: citrate transmembrane transporter activity (GO:0015137);|Molecular Function: antiporter activity (GO:0015297);|Biological Process: citrate transport (GO:0015746);|Cellular Component: integral component of membrane (GO:0016021); "PF01554.17,PF14667.5" MatE|Polysaccharide biosynthesis C-terminal domain TRINITY_DN19757_c1_g1_i3 203.9255121 407.0794475 0.771576693 0.001895396 -9.043285104 2.19E-74 4.04E-72 Down 40.62032 32.03273 31.24067 0 0 0.151858 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19758_c1_g3_i2 754.2484514 476.7672792 1031.729624 2.164010973 1.113707814 2.58E-25 1.14E-23 Up 36.70603 35.40215 41.98909 66.86042 65.7058 66.82377 XP_011097430.1 "50S ribosomal protein L12, chloroplastic-like [Sesamum indicum]" P36688|RK12_NICSY "50S ribosomal protein L12, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV=1" sind:105176357 K02935 "RP-L7, MRPL12, rplL" large subunit ribosomal protein L7/L12 ko03010 Ribosome KOG1715 Mitochondrial/chloroplast ribosomal protein L12 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0222 Seems to be the binding site for several of the factors involved in protein synthesis and appears to be essential for accurate translation (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Cellular Component: chloroplast (GO:0009507); "PF00542.18,PF16320.4" Ribosomal protein L7/L12 C-terminal domain|Ribosomal protein L7/L12 dimerisation domain TRINITY_DN19759_c0_g1_i1 153.1335173 207.6786525 98.58838214 0.474716014 -1.074863376 2.52E-07 2.64E-06 Down 12.29112 15.20723 15.75634 5.653495 4.023831 6.884439 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19759_c0_g2_i3 194.9650279 261.7764843 128.1535714 0.489553413 -1.030461819 4.75E-08 5.48E-07 Down 6.977741 9.082645 7.699694 2.553147 3.131108 3.704218 XP_023760264.1 uncharacterized protein LOC111908693 [Lactuca sativa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBST Mariner sub-class -- -- -- TRINITY_DN19762_c1_g3_i1 12.90777446 23.13330965 2.682239265 0.115947061 -3.108461844 0.000179354 0.001126062 Down 4.391956 1.802829 2.896103 0.1499628 0 0.7164761 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19772_c1_g3_i1 18.149537 29.71027842 6.588795574 0.22176822 -2.172875454 0.000916123 0.004827453 Down 2.798353 5.49981 5.732199 1.8784 0.6258896 3.26E-41 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19773_c0_g2_i8 95.76817152 151.9306402 39.60570284 0.260682788 -1.939632766 3.80E-12 6.98E-11 Down 9.258644 10.25553 8.188244 1.658331 2.497271 1.647094 XP_011101406.1 probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- T ENOG410XUCB LRR receptor-like serine threonine-protein kinase -- -- -- TRINITY_DN19779_c0_g1_i1 24.86343615 33.83857413 15.88829816 0.469532141 -1.090704177 0.042565764 0.124705547 Down 2.450558 4.003511 2.391961 1.473701 1.104162 0.7334011 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19781_c0_g1_i10 89.16816906 119.6844803 58.6518578 0.490053996 -1.028987376 0.000146236 0.000937715 Down 6.474905 7.192098 7.41579 1.756878 2.791317 3.761283 EYU35110.1 hypothetical protein MIMGU_mgv1a016565mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41115QU cAMP-regulated phosphoprotein/endosulfine conserved region -- PF04667.16 cAMP-regulated phosphoprotein/endosulfine conserved region TRINITY_DN19784_c0_g1_i3 954.5575887 620.3664996 1288.748678 2.07739889 1.054778261 1.19E-24 5.06E-23 Up 38.22929 30.58188 27.4308 51.91012 55.70084 53.67847 ABR92332.1 putative aldo/keto reductase 2 [Salvia miltiorrhiza] Q9ASZ9|ALKR5_ARATH Probable aldo-keto reductase 5 OS=Arabidopsis thaliana OX=3702 GN=At1g60730 PE=2 SV=1 -- -- -- -- -- -- KOG1575 "Voltage-gated shaker-like K+ channel, subunit beta/KCNAB" [C] METABOLISM Energy production and conversion C COG0667 Aldo keto reductase Cellular Component: cytosol (GO:0005829);|Molecular Function: oxidoreductase activity (GO:0016491); PF00248.20 Aldo/keto reductase family TRINITY_DN19789_c0_g1_i1 22.10895243 36.04448295 8.173421917 0.226759305 -2.14076634 0.000314908 0.001870779 Down 4.693047 5.672013 3.122372 0.3450219 1.196755 0.9285445 ONI20258.1 hypothetical protein PRUPE_2G005000 [Prunus persica] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4110M78 Plant pleckstrin homology-like region -- -- -- TRINITY_DN19789_c1_g5_i6 131.5537676 179.193682 83.91385314 0.46828578 -1.094538865 1.44E-06 1.35E-05 Down 6.412236 5.566203 6.101655 2.425701 1.740042 2.685136 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN1978_c0_g1_i1 10.59134412 21.18268823 0 0 #NAME? 0.010300361 0.039009202 Down 1.251788 9.604954 2.456227 0 0 0 KZN00367.1 hypothetical protein DCAR_009121 [Daucus carota subsp. sativus] Q949X7|DCDA1_ARATH "Diaminopimelate decarboxylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LYSA1 PE=1 SV=1" nnu:104595632 K01586 lysA diaminopimelate decarboxylase ko00300 Lysine biosynthesis KOG0622 Ornithine decarboxylase [E] METABOLISM Amino acid transport and metabolism -- -- -- Molecular Function: diaminopimelate decarboxylase activity (GO:0008836);|Biological Process: lysine biosynthetic process via diaminopimelate (GO:0009089);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570); -- -- TRINITY_DN19790_c0_g1_i2 60.55203688 8.927379641 112.1766941 12.56546698 3.651392383 2.34E-21 8.41E-20 Up 0.1489694 1.380844 0.3324111 5.261447 5.983674 7.409199 XP_015158495.1 PREDICTED: uncharacterized protein LOC107057907 [Solanum tuberosum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19790_c0_g2_i3 56.9778745 35.3503296 78.6054194 2.223612065 1.152905115 0.00100199 0.00523218 Up 6.454353 4.128676 8.25857 12.57667 11.39404 9.960704 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19790_c0_g3_i1 15.019424 29.31437752 0.724470471 0.024713828 -5.338537724 1.52E-05 0.000119046 Down 1.136281 3.685534 2.524249 2.54E-69 0.1507167 7.98E-23 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19790_c0_g4_i1 20.70150374 39.58128341 1.821724075 0.046024886 -4.441442027 1.86E-09 2.57E-08 Down 5.568381 6.159702 8.807222 0.2470101 0.4898307 5.94E-15 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19790_c0_g7_i1 97.46955613 11.67593361 183.2631787 15.69580513 3.97230713 7.82E-28 3.97E-26 Up 0.7385932 0.8866032 1.077109 13.0043 11.90213 9.060939 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19798_c0_g2_i1 22.39975551 44.79951101 0 0 #NAME? 8.22E-15 1.88E-13 Down 6.049181 5.841237 9.414339 0 0 0 XP_012829212.1 PREDICTED: putative late blight resistance protein homolog R1A-10 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19798_c0_g3_i2 41.5868258 27.21019771 55.96345389 2.056708829 1.040337564 0.006663902 0.027085827 Up 1.678489 1.084679 0.8507906 1.861417 2.332364 1.79756 PIN12589.1 hypothetical protein CDL12_14790 [Handroanthus impetiginosus] F4HVY0|CER1_ARATH Protein ECERIFERUM 1 OS=Arabidopsis thaliana OX=3702 GN=CER1 PE=1 SV=1 sind:105167221 K15404 "K15404, CER1" aldehyde decarbonylase ko00073 "Cutin, suberine and wax biosynthesis" -- -- -- -- -- -- -- -- Molecular Function: sphingosine hydroxylase activity (GO:0000170);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: wax biosynthetic process (GO:0010025);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: sphingolipid biosynthetic process (GO:0030148);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: alkane biosynthetic process (GO:0043447);|Biological Process: defense response to fungus (GO:0050832); PF04116.12 Fatty acid hydroxylase superfamily TRINITY_DN19803_c0_g1_i6 476.5001677 271.6661253 681.3342101 2.507983685 1.326527963 2.72E-25 1.20E-23 Up 18.8328 19.10996 18.34765 38.15851 38.6956 37.0507 PIN25731.1 hypothetical protein CDL12_01525 [Handroanthus impetiginosus] Q9LZT4|EXLA1_ARATH Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- G ENOG410YDTV expansin-like -- "PF01357.20,PF03330.17" Pollen allergen|Lytic transglycolase TRINITY_DN19804_c0_g1_i3 71.40424735 111.2345358 31.57395891 0.283850323 -1.816797712 9.61E-09 1.21E-07 Down 4.244274 3.825561 4.353415 1.203699 0.74897 0.8944005 CAN83392.1 hypothetical protein VITISV_041406 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN19806_c0_g1_i2 16.67511538 25.71692107 7.63330969 0.296820512 -1.752337299 0.009728389 0.037225049 Down 2.914357 2.004393 2.257791 0.4237978 1.284077 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19806_c7_g1_i1 9.37055286 17.65440001 1.086705707 0.061554383 -4.021994593 0.016164976 0.056785077 Down 4.549848 1.819527 0.8984398 0 0.4199633 3.12E-66 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19808_c3_g1_i1 74.97529235 47.43160447 102.5189802 2.161406543 1.111970457 0.000104895 0.000692585 Up 12.51605 5.989695 5.443873 13.34819 14.5976 14.13165 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00646.32 F-box domain TRINITY_DN19808_c4_g1_i1 19.01343987 10.82119878 27.20568097 2.514109714 1.330047609 0.019498243 0.066397881 Up 1.842096 2.693616 0.470693 3.259216 2.911273 3.901301 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19811_c0_g13_i1 279.8246308 419.2355498 140.4137119 0.334927971 -1.578077231 6.95E-22 2.56E-20 Down 48.27082 48.24316 48.50697 14.10307 12.22984 12.74655 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19811_c0_g1_i2 42.71688804 72.75639082 12.67738526 0.174244284 -2.520816761 5.66E-09 7.37E-08 Down 5.322005 5.863765 3.876382 0.3510518 0.8512218 0.887299 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19811_c0_g5_i1 29.54424332 44.54191176 14.54657487 0.326581736 -1.614483984 0.000851279 0.004528017 Down 1.995034 2.483192 2.536295 0.7982485 0.3562431 0.7150381 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19813_c0_g3_i3 31.13793369 45.48522177 16.79064562 0.369145075 -1.437740183 0.00297253 0.013551478 Down 3.555379 4.045101 2.076365 1.068122 0.6873081 1.146005 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19813_c0_g6_i1 7.534956593 15.06991319 0 0 #NAME? 2.56E-05 0.000191432 Down 1.348871 2.19537 1.684673 3.93E-50 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19815_c0_g1_i1 50.5563273 71.81968409 29.29297052 0.407868273 -1.293824807 0.000509872 0.002872373 Down 3.215929 4.345074 3.043217 1.319416 1.174688 1.036152 PIN02658.1 "Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Handroanthus impetiginosus]" Q8LPL5|FZR3_ARATH Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=FZR3 PE=1 SV=1 sind:105167135 K03364 CDH1 "cell division cycle 20-like protein 1, cofactor of APC complex" ko04120 Ubiquitin mediated proteolysis KOG0305 "Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits" [DO] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning |Posttranslational modification, protein turnover, chaperones " S COG2319 wd repeat -- "PF00400.31,PF12894.6,PF08662.10" "WD domain, G-beta repeat|Anaphase-promoting complex subunit 4 WD40 domain|Eukaryotic translation initiation factor eIF2A" TRINITY_DN19832_c1_g1_i2 63.14239624 35.88605614 90.39873635 2.51904907 1.332879226 5.64E-05 0.000394932 Up 1.253052 1.171653 1.62453 2.855576 2.942511 2.347964 XP_011093899.1 pectinesterase [Sesamum indicum] Q3E989|PME54_ARATH Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana OX=3702 GN=PME54 PE=2 SV=1 sind:105173729 K01051 E3.1.1.11 pectinesterase ko00040|ko00500 Pentose and glucuronate interconversions|Starch and sucrose metabolism -- -- -- -- -- G COG4677 pectinesterase Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: pectinesterase activity (GO:0030599);|Biological Process: cell wall modification (GO:0042545);|Molecular Function: aspartyl esterase activity (GO:0045330);|Biological Process: pectin catabolic process (GO:0045490);|Molecular Function: pectinesterase inhibitor activity (GO:0046910); "PF01095.18,PF04043.14,PF12708.6" Pectinesterase|Plant invertase/pectin methylesterase inhibitor|Pectate lyase superfamily protein TRINITY_DN19837_c4_g2_i3 168.0747463 315.0591303 21.09036222 0.066940965 -3.900966841 1.88E-55 2.37E-53 Down 24.78243 23.06958 20.47956 1.087602 1.604925 1.005513 KYP39032.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN19837_c4_g3_i1 6.256568769 11.41060999 1.102527553 0.096623016 -3.371489301 0.008624379 0.033690745 Down 2.969975 1.126802 1.914154 0.5028147 7.01E-16 0.004749879 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19837_c4_g4_i2 11.07845287 20.61375235 1.543153387 0.074860383 -3.739653769 8.12E-05 0.00054938 Down 1.877864 1.967626 2.393447 0 0 0.3768614 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19837_c5_g1_i5 48.59597388 69.68450231 27.50744545 0.394742655 -1.341015673 0.000378887 0.002205827 Down 2.956659 3.086755 2.736363 0.6148701 1.12959 1.018071 PIN22644.1 hypothetical protein CDL12_04628 [Handroanthus impetiginosus] P24465|C71A1_PERAE Cytochrome P450 71A1 OS=Persea americana OX=3435 GN=CYP71A1 PE=1 SV=2 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: fruit ripening (GO:0009835);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);|Cellular Component: organelle membrane (GO:0031090);" PF00067.21 Cytochrome P450 TRINITY_DN19840_c0_g1_i15 39.1152918 16.33335258 61.89723102 3.789621923 1.922053923 6.11E-06 5.14E-05 Up 0.8203566 0.7372689 0.7116246 2.349742 1.849627 2.722975 XP_011083766.1 wall-associated receptor kinase-like 14 [Sesamum indicum] Q8RY67|WAKLO_ARATH Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana OX=3702 GN=WAKL14 PE=2 SV=2 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN19840_c0_g2_i1 8.696139336 2.478553932 14.91372474 6.017107212 2.589070063 0.009153339 0.035397642 Up 0 0.5867326 0.4736055 1.099245 1.828574 2.132643 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19843_c0_g4_i1 57.39301877 22.50913029 92.27690725 4.099532325 2.035459336 7.31E-09 9.37E-08 Up 4.452113 1.657919 2.978421 10.40276 8.85367 10.68972 AAD55478.1 "Hypothetical protein, partial [Arabidopsis thaliana]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111DDF NA -- -- -- TRINITY_DN19848_c0_g2_i1 1034.850476 683.7221412 1385.97881 2.027108275 1.01942315 2.33E-27 1.16E-25 Up 39.38778 41.84853 37.41191 65.19355 59.30292 69.63455 KZV28687.1 putative mediator of RNA polymerase II transcription subunit 36b [Dorcoceras hygrometricum] Q94AH9|MD36A_ARATH Mediator of RNA polymerase II transcription subunit 36a OS=Arabidopsis thaliana OX=3702 GN=MED36A PE=1 SV=2 sind:105166694 K14563 "NOP1, FBL" rRNA 2'-O-methyltransferase fibrillarin ko03008 Ribosome biogenesis in eukaryotes KOG1596 Fibrillarin and related nucleolar RNA-binding proteins [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification J COG1889 Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA (By similarity) Biological Process: box C/D snoRNA 3'-end processing (GO:0000494);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: ribonuclease activity (GO:0004540);|Cellular Component: nucleolus (GO:0005730);|Molecular Function: rRNA methyltransferase activity (GO:0008649);|Cellular Component: Cajal body (GO:0015030);|Cellular Component: mediator complex (GO:0016592);|Molecular Function: snoRNA binding (GO:0030515);|Biological Process: rRNA methylation (GO:0031167);|Cellular Component: box C/D snoRNP complex (GO:0031428);|Cellular Component: small-subunit processome (GO:0032040);|Biological Process: histone glutamine methylation (GO:1990258);|Molecular Function: histone-glutamine methyltransferase activity (GO:1990259); PF01269.16 Fibrillarin TRINITY_DN1984_c0_g1_i1 5.026748511 8.896131982 1.15736504 0.130097557 -2.942334221 0.037255571 0.112100102 Down 2.267267 1.759941 0.7079269 0 0 0.4391631 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19856_c0_g1_i2 3.269418664 6.538837328 0 0 #NAME? 0.013181145 0.04799709 Down 1.777708 0.8501445 0.9800108 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19856_c2_g1_i1 14.12722449 0 28.25444898 Inf Inf 0.010625789 0.04001132 Up 0 0 0 10.26801 0.2001582 3.525229 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19856_c2_g2_i1 19.57385394 1.143301217 38.00440666 33.24093957 5.054889256 1.50E-10 2.34E-09 Up 0.2509749 0 0.1940704 5.848312 2.971828 4.917175 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19856_c3_g1_i1 9.285150527 17.4677735 1.102527553 0.063117807 -3.985809114 0.000275474 0.001658575 Down 2.171499 2.731233 1.673521 0.3365445 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19856_c3_g2_i2 20.58745609 37.88069406 3.294218128 0.086962982 -3.523454772 2.59E-07 2.71E-06 Down 4.726757 5.36639 3.997316 0.2666905 0.6651839 0.1454782 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19856_c3_g3_i1 74.33599262 130.9275027 17.74448256 0.135529069 -2.883325772 9.30E-18 2.64E-16 Down 7.914091 7.537794 7.635295 1.678449 0.39713 0.4246871 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19859_c0_g1_i1 180.1140714 115.8861573 244.3419855 2.108465681 1.076193539 0.000977633 0.005115583 Up 12.36434 13.32331 11.91874 19.2708 27.9327 16.75747 PQM42846.1 putative LRR receptor-like serine/threonine-protein kinase [Prunus yedoensis var. nudiflora] Q6JN46|EIX2_SOLLC Receptor-like protein EIX2 OS=Solanum lycopersicum OX=4081 GN=EIX2 PE=1 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF13855.5,PF12799.6,PF13516.5,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich repeat|Leucine Rich Repeat TRINITY_DN19859_c0_g2_i6 358.6968833 235.3806478 482.0131189 2.04780267 1.034076701 4.37E-13 8.70E-12 Up 9.545904 10.44524 9.366313 14.26242 16.70172 17.60684 XP_012841431.1 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Erythranthe guttata] Q6JN47|EIX1_SOLLC Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF12799.6,PF13855.5,PF00560.32,PF08263.11,PF13516.5" Leucine Rich repeats (2 copies)|Leucine rich repeat|Leucine Rich Repeat|Leucine rich repeat N-terminal domain|Leucine Rich repeat TRINITY_DN19860_c0_g1_i1 11.16112558 20.77909778 1.543153387 0.074264696 -3.751179639 8.35E-05 0.0005632 Down 3.965169 3.0411 3.0996 1.21E-86 4.04E-45 0.5992476 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19860_c0_g2_i1 20.61915593 41.23831186 0 0 #NAME? 1.19E-07 1.30E-06 Down 1.589423 4.311726 2.270032 9.82E-62 3.78E-60 2.22E-56 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19860_c0_g4_i5 89.38082825 127.5536483 51.20800824 0.401462513 -1.316662812 2.62E-06 2.35E-05 Down 6.36622 6.397373 5.490611 2.77423 1.461031 1.658202 PIM99330.1 Conserved phosducin-like protein [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG3170 Conserved phosducin-like protein [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG4111H24 Phosducinlike -- -- -- TRINITY_DN19862_c0_g1_i1 174.5366521 90.57133748 258.5019667 2.854125531 1.513048789 5.24E-14 1.12E-12 Up 2.484552 2.498314 2.462365 5.208409 6.179505 5.800506 XP_011076612.1 putative receptor-like protein kinase At4g00960 [Sesamum indicum] Q9C5S9|CRK6_ARATH Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana OX=3702 GN=CRK6 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24,PF01657.16" Protein tyrosine kinase|Protein kinase domain|Salt stress response/antifungal TRINITY_DN19865_c0_g1_i1 14.60447571 5.050202268 24.15874915 4.78371912 2.258132683 0.002014848 0.009698834 Up 0.2521845 0.9732255 0.9516723 3.557215 2.388567 2.78341 PIN24497.1 hypothetical protein CDL12_02785 [Handroanthus impetiginosus] Q9LXG0|ZHD8_ARATH Zinc-finger homeodomain protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZHD8 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKTX homeobox protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: glucosinolate metabolic process (GO:0019760);|Molecular Function: protein homodimerization activity (GO:0042803);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN19870_c0_g1_i1 154.2235069 209.3871234 99.05989033 0.473094471 -1.079799795 3.36E-07 3.46E-06 Down 8.612192 10.33371 9.505278 3.488861 3.940587 3.412642 XP_011094497.1 uncharacterized protein LOC105174177 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG411137G Protein of unknown function (DUF1635) -- PF07795.10 Protein of unknown function (DUF1635) TRINITY_DN19874_c1_g3_i1 24.09863287 10.04787579 38.14938995 3.796761697 1.924769451 0.00053229 0.002984097 Up 0.3520176 0.8522295 1.077894 2.875569 2.228884 1.863266 PIN10920.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9FID8|Y5900_ARATH Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana OX=3702 GN=At5g39000 PE=3 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein autophosphorylation (GO:0046777); PF12819.6 Carbohydrate-binding protein of the ER TRINITY_DN19881_c0_g2_i2 115.99917 26.68132014 205.3170198 7.695159711 2.94395127 1.23E-18 3.69E-17 Up 0.4991991 2.141683 1.149551 6.961571 9.532703 7.246219 EYU31937.1 hypothetical protein MIMGU_mgv1a004069mg [Erythranthe guttata] P28769|TCPA_ARATH T-complex protein 1 subunit alpha OS=Arabidopsis thaliana OX=3702 GN=CCT1 PE=1 SV=1 sind:105170887 K09493 "CCT1, TCP1" T-complex protein 1 subunit alpha -- -- KOG0360 "Chaperonin complex component, TCP-1 alpha subunit (CCT1)" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0459 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity) Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytosol (GO:0005829);|Cellular Component: chaperonin-containing T-complex (GO:0005832);|Biological Process: protein folding (GO:0006457);|Molecular Function: unfolded protein binding (GO:0051082); PF00118.23 TCP-1/cpn60 chaperonin family TRINITY_DN19884_c0_g2_i2 12.68094411 20.50869486 4.853193362 0.236640771 -2.079229438 0.006896665 0.02788956 Down 3.497897 2.711685 4.259702 0.8115005 0.3940745 0.8410265 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19884_c0_g4_i1 15.89237259 26.98920593 4.795539242 0.177683599 -2.492617576 0.000518769 0.002919474 Down 4.035115 5.90927 3.868104 0.4946639 0.9763565 0.4652384 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19894_c0_g4_i1 80.15277291 31.20819666 129.0973492 4.136648796 2.048462477 3.41E-10 5.12E-09 Up 1.674212 3.045948 2.036805 6.026105 9.247867 7.402538 PIN22914.1 Tripeptidyl-peptidase II [Handroanthus impetiginosus] Q9MAP5|SBT33_ARATH Subtilisin-like protease SBT3.3 OS=Arabidopsis thaliana OX=3702 GN=SBT3.3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: plant-type cell wall (GO:0009505);|Biological Process: induced systemic resistance (GO:0009682);|Cellular Component: extracellular matrix (GO:0031012); "PF05922.15,PF00082.21" Peptidase inhibitor I9|Subtilase family TRINITY_DN19894_c0_g5_i1 263.0967682 132.579049 393.6144875 2.968904141 1.569930513 6.19E-21 2.16E-19 Up 4.179162 5.022509 4.650664 11.2122 11.17229 10.84776 PIN22915.1 Tripeptidyl-peptidase II [Handroanthus impetiginosus] F4HPF1|SBT34_ARATH Subtilisin-like protease SBT3.4 OS=Arabidopsis thaliana OX=3702 GN=SBT3.4 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576); PF00082.21 Subtilase family TRINITY_DN19894_c0_g7_i1 321.7008308 198.27664 445.1250216 2.244969561 1.166695884 1.16E-14 2.60E-13 Up 4.736838 5.803045 5.335701 10.1521 8.679992 9.950701 PIN22915.1 Tripeptidyl-peptidase II [Handroanthus impetiginosus] Q9MAP7|SBT35_ARATH Subtilisin-like protease SBT3.5 OS=Arabidopsis thaliana OX=3702 GN=SBT3.5 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Biological Process: regulation of growth (GO:0040008); "PF00082.21,PF05922.15" Subtilase family|Peptidase inhibitor I9 TRINITY_DN19902_c0_g1_i7 209.9888066 366.7634799 53.21413327 0.145091145 -2.784968621 8.18E-14 1.72E-12 Down 45.4416 29.90206 34.20782 5.285895 1.697131 5.868685 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19903_c0_g1_i2 73.84842465 147.6968493 0 0 #NAME? 2.08E-46 2.03E-44 Down 6.798054 8.245531 7.780772 0 5.95E-68 1.74E-46 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19903_c0_g2_i3 37.31651104 53.29045891 21.34256317 0.400495015 -1.320143808 0.001936087 0.009354424 Down 1.894866 1.84227 2.483753 0.4937808 1.104646 0.4212429 XP_011074522.1 protein indeterminate-domain 2 [Sesamum indicum] Q9SCQ6|IDD2_ARATH Zinc finger protein GAI-ASSOCIATED FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=GAF1 PE=1 SV=1 -- -- -- -- -- -- KOG1721 FOG: Zn-finger [R] POORLY CHARACTERIZED General function prediction only S COG5048 Zinc finger protein "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);|Biological Process: regulation of gibberellic acid mediated signaling pathway (GO:0009937);|Biological Process: gibberellic acid homeostasis (GO:0010336);|Molecular Function: metal ion binding (GO:0046872);" "PF00096.25,PF12171.7" "Zinc finger, C2H2 type|Zinc-finger double-stranded RNA-binding" TRINITY_DN19906_c0_g2_i2 57.17507797 19.83042796 94.51972798 4.766398796 2.252899664 4.80E-10 7.09E-09 Up 0.5645645 0.6257739 0.8694234 2.936151 2.746656 2.328859 XP_011077656.1 wall-associated receptor kinase 2 [Sesamum indicum] Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16,PF13947.5,PF07645.14,PF12947.6" Protein kinase domain|Protein tyrosine kinase|Wall-associated receptor kinase galacturonan-binding|Calcium-binding EGF domain|EGF domain TRINITY_DN19908_c1_g1_i8 355.3977461 621.3867917 89.40870041 0.143885743 -2.797004443 9.11E-69 1.49E-66 Down 36.54439 33.33031 35.67518 4.130645 4.298479 3.838664 PIN26252.1 Loganate O-methyltransferase [Handroanthus impetiginosus] Q9FYC4|FAMT_ARATH Farnesoic acid carboxyl-O-methyltransferase OS=Arabidopsis thaliana OX=3702 GN=FAMT PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111GV5 carboxyl methyltransferase Biological Process: response to molecule of fungal origin (GO:0002238);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: response to jasmonic acid (GO:0009753);|Molecular Function: farnesoic acid O-methyltransferase activity (GO:0019010);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: response to herbivore (GO:0080027); -- -- TRINITY_DN19909_c0_g1_i1 76.6748392 105.2379935 48.11168495 0.457170299 -1.129196416 0.001737406 0.008504912 Down 17.17914 28.20171 17.74227 6.797684 6.929826 9.53726 XP_012827815.1 PREDICTED: uncharacterized protein LOC105949094 isoform X1 [Erythranthe guttata] -- -- sind:105170403 K12471 EPN epsin ko04144 Endocytosis KOG2056 Equilibrative nucleoside transporter protein [F] METABOLISM Nucleotide transport and metabolism U ENOG410XSM0 Clathrin interactor 1 -- -- -- TRINITY_DN19909_c1_g2_i3 24.33194115 47.93941183 0.724470471 0.01511221 -6.048141511 1.76E-13 3.64E-12 Down 3.65633 4.673416 3.122306 9.01E-49 0.1058615 1.73E-34 XP_011089813.1 epsin-2 [Sesamum indicum] -- -- sind:105170656 K12471 EPN epsin ko04144 Endocytosis KOG2056 Equilibrative nucleoside transporter protein [F] METABOLISM Nucleotide transport and metabolism U ENOG410XSM0 Clathrin interactor 1 -- -- -- TRINITY_DN19909_c1_g6_i1 9.847528176 3.801843564 15.89321279 4.180396305 2.063639717 0.023120048 0.076165784 Up 0.2092643 0.3005223 0.6347673 0.8991974 1.744728 0.970189 XP_011075793.1 cellulose synthase-like protein D3 [Sesamum indicum] Q9LFL0|CSLD2_ARATH Cellulose synthase-like protein D2 OS=Arabidopsis thaliana OX=3702 GN=CSLD2 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- M COG1215 "Glycosyl transferase, family 2" Cellular Component: endosome (GO:0005768);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to cold (GO:0009409);|Biological Process: plant-type primary cell wall biogenesis (GO:0009833);|Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);|Cellular Component: integral component of Golgi membrane (GO:0030173);|Biological Process: cellulose biosynthetic process (GO:0030244);|Biological Process: root hair elongation (GO:0048767);|Molecular Function: mannan synthase activity (GO:0051753);|Biological Process: cell wall organization (GO:0071555); PF03552.13 Cellulose synthase TRINITY_DN19913_c0_g1_i1 16.44070447 28.70839647 4.17301248 0.145358606 -2.782311609 8.03E-05 0.000543996 Down 3.397979 2.820478 3.697773 0 0.2818699 0.8354825 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19914_c0_g1_i10 5260.741418 3445.234262 7076.248574 2.053923779 1.038382644 4.18E-60 5.93E-58 Up 129.1491 130.5472 136.7943 224.219 218.3095 214.5753 XP_011098108.1 heme-binding protein 2-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZWW6 Heme binding protein 2 -- PF04832.11 SOUL heme-binding protein TRINITY_DN19916_c0_g1_i2 26.42090781 13.1390837 39.70273192 3.021727605 1.595373614 0.001687523 0.008292027 Up 1.173106 0.3451325 0.7574868 1.820337 1.946936 1.706457 XP_012847073.1 "PREDICTED: ubiquinol oxidase 2, mitochondrial [Erythranthe guttata]" Q8LEE7|AOX3_ARATH "Ubiquinol oxidase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=AOX3 PE=1 SV=2" sind:105159718 K17893 "AOX1, AOX2" ubiquinol oxidase -- -- -- -- -- -- -- S ENOG410YFEH alternative oxidase Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Molecular Function: alternative oxidase activity (GO:0009916);|Biological Process: alternative respiration (GO:0010230);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872);|Cellular Component: respiratory chain (GO:0070469);|Molecular Function: ubiquinol:oxygen oxidoreductase activity (GO:0102721); PF01786.16 Alternative oxidase TRINITY_DN19918_c0_g1_i1 37.49049516 60.44496335 14.53602697 0.240483676 -2.055989128 0.006342491 0.025925682 Down 2.467698 6.410899 3.232738 0.9038855 0.6063978 0.8812835 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XS9Z tryptophan aminotransferase-related protein 4-like -- -- -- TRINITY_DN19918_c1_g1_i12 4237.506938 8369.761887 105.2519903 0.012575267 -6.313267159 0 0 Down 276.9174 282.3189 278.6294 2.618547 3.306217 2.56518 XP_012853023.1 PREDICTED: tryptophan aminotransferase-related protein 4-like isoform X1 [Erythranthe guttata] Q93Z38|TAR4_ARATH Tryptophan aminotransferase-related protein 4 OS=Arabidopsis thaliana OX=3702 GN=TAR4 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XS9Z tryptophan aminotransferase-related protein 4-like Molecular Function: transaminase activity (GO:0008483);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: carbon-sulfur lyase activity (GO:0016846); "PF04864.12,PF04863.12" Allinase|Alliinase EGF-like domain TRINITY_DN19920_c0_g3_i1 13.34464737 25.91771804 0.771576693 0.02977024 -5.069985324 5.15E-05 0.00036396 Down 1.8695 5.57205 3.073753 1.04E-05 1.33E-30 0.2850766 XP_020552459.1 protein CELLULOSE SYNTHASE INTERACTIVE 1 [Sesamum indicum] F4IIM1|CSI1_ARATH Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=CSI1 PE=1 SV=1 -- -- -- -- -- -- KOG0167 FOG: Armadillo/beta-catenin-like repeats [S] POORLY CHARACTERIZED Function unknown S ENOG410ZTP2 ARM Cellular Component: cytoplasm (GO:0005737);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: microtubule binding (GO:0008017);|Biological Process: regulation of cell shape (GO:0008360);|Biological Process: response to water deprivation (GO:0009414);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: plant-type primary cell wall biogenesis (GO:0009833);|Cellular Component: cytoplasmic side of plasma membrane (GO:0009898);|Biological Process: anther dehiscence (GO:0009901);|Biological Process: pollen wall assembly (GO:0010208);|Biological Process: cellulose microfibril organization (GO:0010215);|Cellular Component: cellulose synthase complex (GO:0010330);|Biological Process: cellulose biosynthetic process (GO:0030244);|Cellular Component: microtubule minus-end (GO:0036449);|Biological Process: regulation of growth (GO:0040008);|Biological Process: cortical microtubule organization (GO:0043622);|Biological Process: gynoecium development (GO:0048467);|Biological Process: pollen tube development (GO:0048868);|Biological Process: anisotropic cell growth (GO:0051211);|Biological Process: response to calcium ion (GO:0051592);|Cellular Component: cortical microtubule (GO:0055028);|Biological Process: regulation of microtubule cytoskeleton organization (GO:0070507);|Biological Process: protein localization to cortical microtubule cytoskeleton (GO:0072699);|Biological Process: regulation of root morphogenesis (GO:2000067); -- -- TRINITY_DN19921_c0_g1_i1 13.55546415 3.77367869 23.3372496 6.184217449 2.628591048 0.000377156 0.002196313 Up 0.8149448 0.4778345 0.1245666 2.212598 2.362178 1.891979 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19923_c0_g1_i1 78.80621574 32.83937208 124.7730594 3.799495894 1.925808019 1.05E-10 1.68E-09 Up 1.518711 1.249992 1.158925 4.69228 3.513856 3.775099 XP_011097162.1 uncharacterized protein LOC105176146 [Sesamum indicum] Q8H0Z4|GT121_ARATH Putative glutamine amidotransferase GAT1_2.1 OS=Arabidopsis thaliana OX=3702 GN=GAT1_2.1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG2071 Glutamine amidotransferase Biological Process: glutamine metabolic process (GO:0006541);|Molecular Function: transferase activity (GO:0016740);|Molecular Function: hydrolase activity (GO:0016787);|Biological Process: regulation of secondary shoot formation (GO:2000032); "PF07722.12,PF00117.27" Peptidase C26|Glutamine amidotransferase class-I TRINITY_DN19924_c0_g1_i5 93.01514257 149.4674475 36.56283767 0.24462074 -2.031381366 5.03E-13 9.96E-12 Down 10.42106 10.96076 11.1951 2.017646 1.750705 2.615109 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19928_c2_g2_i1 9.937270365 16.18152904 3.693011689 0.228223901 -2.131478205 0.016010332 0.05632902 Down 2.590749 3.240815 4.142387 0 1.29586 0.6749288 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19928_c3_g1_i1 47.45204055 67.87994175 27.02413936 0.398116714 -1.328736654 0.02026477 0.06849432 Down 3.424729 6.142782 2.981622 1.437273 0.6113186 1.958396 XP_017233167.1 "PREDICTED: uncharacterized protein LOC108207215, partial [Daucus carota subsp. sativus]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19947_c0_g1_i12 42.64163349 59.03441165 26.24885533 0.44463652 -1.169301648 0.003470559 0.01548448 Down 1.779356 1.915929 1.901517 1.053981 0.5175147 0.4095786 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19947_c0_g3_i2 19.12090541 37.50679246 0.735018369 0.01959694 -5.673227776 1.63E-10 2.54E-09 Down 1.595285 1.220331 1.571685 0.06919051 0 0 KMT19233.1 hypothetical protein BVRB_1g014150 [Beta vulgaris subsp. vulgaris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03078.14 ATHILA ORF-1 family TRINITY_DN19947_c0_g4_i1 8.36306482 14.51334327 2.212786371 0.152465654 -2.713443814 0.008199799 0.032290575 Down 1.812474 1.306718 1.588527 0.3025413 0.1504474 0.1495679 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19949_c0_g1_i4 234.6492077 363.8263566 105.4720589 0.289896697 -1.786389201 1.99E-23 7.96E-22 Down 12.93319 13.72947 14.42379 3.171612 3.271916 3.185326 AJD25185.1 cytochrome P450 CYP76S7 [Salvia miltiorrhiza] Q8VWZ7|C76B6_CATRO Geraniol 8-hydroxylase OS=Catharanthus roseus OX=4058 GN=CYP76B6 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: monoterpenoid biosynthetic process (GO:0016099);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN19952_c0_g2_i1 12.79155841 18.88992023 6.693196599 0.354326356 -1.496849313 0.047686264 0.136405733 Down 1.223549 2.365992 1.657373 0.4677387 0.4710054 0.513766 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19959_c0_g2_i1 9.576243164 16.61683968 2.535646649 0.152595 -2.712220405 0.004795636 0.020467121 Down 1.580136 3.501587 2.142502 0 0.8432219 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19959_c0_g3_i1 11.220551 21.70608363 0.735018369 0.033862321 -4.884175333 5.68E-06 4.80E-05 Down 2.547015 1.158939 2.538885 0.1315403 0 0 XP_012833512.1 PREDICTED: (R)-mandelonitrile lyase-like [Erythranthe guttata] Q9SSM2|MDLL_ARATH (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana OX=3702 GN=At1g73050 PE=2 SV=1 pmum:103328816 K08248 E4.1.2.10 (R)-mandelonitrile lyase ko00460 Cyanoamino acid metabolism KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) [R] POORLY CHARACTERIZED General function prediction only E COG2303 oxidoreductase "Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614);|Molecular Function: mandelonitrile lyase activity (GO:0046593);|Molecular Function: flavin adenine dinucleotide binding (GO:0050660);" -- -- TRINITY_DN19959_c0_g4_i1 32.57330232 50.29826529 14.84833935 0.295205794 -1.760207056 0.000217202 0.001339054 Down 4.852377 5.222943 3.477763 0.7963652 1.297152 1.100968 CDP06721.1 unnamed protein product [Coffea canephora] Q9LYX1|LRK82_ARATH L-type lectin-domain containing receptor kinase VIII.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK82 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN19965_c0_g1_i1 20.03505849 33.45495166 6.615165318 0.197733519 -2.338370643 0.003970924 0.01737705 Down 3.914968 5.714271 8.848639 2.987742 2.33E-24 8.43E-21 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19965_c1_g1_i1 10.41601613 19.36199552 1.470036737 0.075923824 -3.719303535 0.047438497 0.135816821 Down 3.812586 5.767901 0 0.5568794 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19965_c1_g2_i1 138.3932431 253.3392022 23.44728389 0.092552924 -3.433577622 3.68E-19 1.14E-17 Down 21.07482 14.35156 15.36117 1.476879 1.015091 1.360683 XP_024028165.1 plant intracellular Ras-group-related LRR protein 7 [Morus notabilis] B9F655|PIRL7_ORYSJ Plant intracellular Ras-group-related LRR protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL7 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- -- -- TRINITY_DN19965_c2_g3_i5 36.95495441 73.13833213 0.771576693 0.010549553 -6.566674352 4.92E-21 1.73E-19 Down 7.843809 9.512537 7.811746 1.02E-47 2.18E-41 0.2342019 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19966_c1_g1_i1 44.90272918 89.80545835 0 0 #NAME? 1.98E-28 1.04E-26 Down 6.169488 7.22912 4.750402 2.86E-09 7.16E-35 5.69E-72 XP_011074043.1 uncharacterized protein LOC105158848 isoform X1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF14389.5 Leucine-zipper of ternary complex factor MIP1 TRINITY_DN19975_c0_g1_i7 78.16295217 46.43108931 109.894815 2.36683689 1.242960287 2.43E-05 0.000182701 Up 1.776202 1.477504 1.808037 3.063803 3.417423 3.185892 XP_011072752.1 F-box/kelch-repeat protein At1g51550 [Sesamum indicum] Q9C8K7|FBK21_ARATH F-box/kelch-repeat protein At1g51550 OS=Arabidopsis thaliana OX=3702 GN=At1g51550 PE=2 SV=1 -- -- -- -- -- -- KOG0379 Kelch repeat-containing proteins [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y5WM Kelch domain containing Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: circadian rhythm (GO:0007623);|Biological Process: response to blue light (GO:0009637);|Cellular Component: SCF ubiquitin ligase complex (GO:0019005); "PF13418.5,PF13415.5,PF13854.5,PF13964.5,PF07646.14,PF01344.24,PF12937.6" "Galactose oxidase, central domain|Galactose oxidase, central domain|Kelch motif|Kelch motif|Kelch motif|Kelch motif|F-box-like" TRINITY_DN19980_c0_g1_i2 51.18112031 82.00162283 20.3606178 0.248295303 -2.009871123 9.54E-06 7.75E-05 Down 6.03054 9.420859 5.398512 1.16583 1.754028 1.194714 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19981_c0_g5_i1 27.41520626 46.94329256 7.887119964 0.168013779 -2.573348543 2.02E-06 1.85E-05 Down 3.104165 3.333242 2.351835 0.2183626 0.3243861 0.6553316 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19981_c0_g6_i2 14.09926181 25.97800598 2.220517635 0.085476831 -3.548322762 2.17E-05 0.000164892 Down 2.367131 3.942808 2.125096 0 0.3856815 0.1788936 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19986_c0_g1_i1 49.06179107 98.12358215 0 0 #NAME? 2.41E-28 1.26E-26 Down 11.72782 18.85339 16.62863 1.07E-29 3.53E-30 4.70E-28 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19986_c2_g1_i7 98.87992651 136.3702426 61.38961047 0.450168668 -1.151462446 1.58E-05 0.000123585 Down 13.52521 10.32454 10.53811 4.436228 4.816461 3.232239 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19986_c3_g1_i1 52.20354905 27.57593723 76.83116086 2.786166802 1.478281632 3.44E-05 0.000252264 Up 3.54227 3.300919 2.769062 8.887573 6.112654 6.475539 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN19998_c0_g1_i1 18.59037312 33.06257124 4.118174993 0.124557009 -3.005121885 1.01E-05 8.18E-05 Down 3.073307 5.875434 4.189264 0.3304661 0.3268726 0.6566913 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20003_c0_g1_i2 144.3940713 96.12137704 192.6667657 2.00441121 1.003178511 3.59E-06 3.15E-05 Up 3.947849 3.572242 3.723939 5.911175 5.824644 6.47998 XP_011099036.1 cytochrome P450 85A1 isoform X1 [Sesamum indicum] Q43147|C85A1_SOLLC Cytochrome P450 85A1 OS=Solanum lycopersicum OX=4081 GN=CYP85A1 PE=2 SV=1 sind:105177542 K12640 "CYP85A2, BR6OX2" brassinosteroid-6-oxidase 2 ko00905 Brassinosteroid biosynthesis KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: brassinosteroid homeostasis (GO:0010268);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: sterol metabolic process (GO:0016125);|Biological Process: brassinosteroid biosynthetic process (GO:0016132);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);|Biological Process: oxidation-reduction process (GO:0055114);" PF00067.21 Cytochrome P450 TRINITY_DN20014_c3_g3_i1 80.54389027 121.5543037 39.53347688 0.32523305 -1.620454225 8.57E-06 7.02E-05 Down 12.65917 20.20009 14.80751 2.240642 4.879554 5.501376 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20014_c3_g4_i1 21.4711317 11.71226056 31.23000283 2.666436823 1.414913146 0.009998364 0.038033666 Up 2.007686 3.852508 1.397839 6.424047 3.950751 4.955254 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20018_c0_g3_i1 15.40285578 7.589044141 23.21666741 3.059234731 1.613170807 0.015831205 0.055819937 Up 0.6571786 0.3659786 0.4969937 1.042607 1.994747 0.835593 XP_012829173.1 PREDICTED: putative late blight resistance protein homolog R1A-10 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- -- -- TRINITY_DN20023_c0_g2_i9 227.0511134 368.6102713 85.49195552 0.231930476 -2.108235693 1.08E-29 6.02E-28 Down 21.64843 20.54018 19.83142 3.850562 3.779426 3.980816 BAG68946.1 APETALA1/FRUITFUL like protein [Hydrangea macrophylla] Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana OX=3702 GN=AGL8 PE=1 SV=1 sot:102602089 K09264 K09264 "MADS-box transcription factor, plant" -- -- KOG0014 MADS box transcription factor [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5068 Transcription factor "Molecular Function: RNA polymerase II regulatory region sequence-specific DNA binding (GO:0000977);|Molecular Function: transcription factor activity, RNA polymerase II proximal promoter sequence-specific DNA binding (GO:0000982);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: multicellular organism development (GO:0007275);|Molecular Function: transcription factor binding (GO:0008134);|Biological Process: flower development (GO:0009908);|Biological Process: positive regulation of flower development (GO:0009911);|Biological Process: maintenance of inflorescence meristem identity (GO:0010077);|Biological Process: fruit development (GO:0010154);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: positive regulation of transcription by RNA polymerase II (GO:0045944);|Molecular Function: protein dimerization activity (GO:0046983);|Biological Process: developmental growth involved in morphogenesis (GO:0060560);" "PF00319.17,PF01486.16" SRF-type transcription factor (DNA-binding and dimerisation domain)|K-box region TRINITY_DN20025_c0_g1_i3 616.1311665 383.1960237 849.0663093 2.215749269 1.147794637 4.06E-23 1.60E-21 Up 19.92695 18.27329 21.99335 34.35199 35.05698 38.26906 PIN22538.1 hypothetical protein CDL12_04731 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41114KP NA -- -- -- TRINITY_DN20030_c0_g1_i1 472.2357082 217.2365691 727.2348473 3.347663105 1.743154348 6.07E-41 5.01E-39 Up 12.72933 14.74644 12.33852 34.45454 37.14441 35.89294 XP_011095174.1 acid phosphatase 1 [Sesamum indicum] P27061|PPA1_SOLLC Acid phosphatase 1 OS=Solanum lycopersicum OX=4081 GN=APS1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111MGT Acid phosphatase Molecular Function: acid phosphatase activity (GO:0003993); PF03767.13 "HAD superfamily, subfamily IIIB (Acid phosphatase)" TRINITY_DN20034_c0_g1_i2 40.42132421 63.74460506 17.09804337 0.268227301 -1.898472008 0.001251402 0.006371116 Down 3.797316 9.191614 8.715928 2.041147 1.226374 1.555743 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20035_c0_g1_i9 275.7209964 448.3561713 103.0858215 0.229919488 -2.120799338 1.59E-35 1.09E-33 Down 20.11532 19.60689 18.85201 3.890025 3.123595 3.871075 EYU25283.1 hypothetical protein MIMGU_mgv1a017121mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41114SQ NA -- -- -- TRINITY_DN20036_c0_g3_i1 12.63747899 6.232510342 19.04244763 3.055341521 1.611333651 0.036692516 0.110773036 Up 0.1202714 0.5838151 0.4538148 0.7285936 0.8289871 1.176019 KZV17518.1 hypothetical protein F511_38353 [Dorcoceras hygrometricum] O74881|BTB1_SCHPO BTB/POZ domain-containing protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=btb1 PE=1 SV=1 -- -- -- -- -- -- KOG0504 FOG: Ankyrin repeat [R] POORLY CHARACTERIZED General function prediction only S COG0666 Ankyrin Repeat Cellular Component: ubiquitin ligase complex (GO:0000151);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: protein modification by small protein conjugation or removal (GO:0070647); PF12796.6 Ankyrin repeats (3 copies) TRINITY_DN20036_c0_g5_i2 29.12223441 43.28243056 14.96203826 0.345683874 -1.532474792 0.00293754 0.013417564 Down 3.430848 3.278319 2.308297 0.7327492 1.646979 0.1069267 PIA41761.1 hypothetical protein AQUCO_02200297v1 [Aquilegia coerulea] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG0666 Ankyrin Repeat -- -- -- TRINITY_DN20036_c0_g6_i1 4.03823233 7.341446291 0.735018369 0.100119015 -3.320212098 0.045501773 0.131482734 Down 1.072997 2.39622 1.295052 0.4048029 7.53E-42 1.88E-34 KZV24305.1 hypothetical protein F511_01787 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20041_c1_g1_i2 97.08656141 47.30174541 146.8713774 3.104988539 1.634587943 7.68E-10 1.10E-08 Up 6.284207 3.716193 4.761417 13.30806 12.48956 11.20014 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20046_c0_g4_i1 4.562003776 9.124007551 0 0 #NAME? 0.002000854 0.009638627 Down 2.804494 1.363418 1.655012 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20046_c0_g5_i1 9.723682776 19.44736555 0 0 #NAME? 0.000144197 0.000925558 Down 4.138458 2.40025 0.9338848 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2004_c0_g1_i1 3.672209863 0.651223126 6.693196599 10.27788531 3.361471554 0.04048876 0.119795741 Up 0.4633137 0 0 1.042829 1.025269 1.037942 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF12799.6,PF13855.5" Leucine Rich repeats (2 copies)|Leucine rich repeat TRINITY_DN20050_c0_g1_i2 95.81693455 52.31446481 139.3194043 2.663114395 1.413114401 8.89E-08 9.86E-07 Up 1.882971 1.9607 1.658404 3.636893 4.637438 3.508715 XP_012849532.1 PREDICTED: protein cfxQ homolog isoform X2 [Erythranthe guttata] Q9MS99|CFXQ_GALSU Protein CfxQ homolog OS=Galdieria sulphuraria OX=130081 GN=cfxQ PE=3 SV=1 -- -- -- -- -- -- KOG0730 AAA+-type ATPase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0464 Aaa atpase Molecular Function: ATP binding (GO:0005524);|Cellular Component: chloroplast (GO:0009507); "PF12796.6,PF00004.28,PF13606.5,PF00023.29,PF13637.5,PF13857.5" Ankyrin repeats (3 copies)|ATPase family associated with various cellular activities (AAA)|Ankyrin repeat|Ankyrin repeat|Ankyrin repeats (many copies)|Ankyrin repeats (many copies) TRINITY_DN20052_c0_g1_i3 698.4361934 948.814679 448.0577079 0.472228896 -1.082441773 1.28E-14 2.87E-13 Down 81.18329 95.15317 76.88662 29.31148 30.2925 36.9306 PIN16114.1 hypothetical protein CDL12_11242 [Handroanthus impetiginosus] O80506|FLZ3_ARATH FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111AXA Protein of unknown function (DUF581) Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Molecular Function: kinase binding (GO:0019900);|Biological Process: response to starvation (GO:0042594);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN20057_c0_g1_i9 53.99531217 73.8602823 34.13034203 0.462093306 -1.113743904 0.00179751 0.008762282 Down 2.603078 2.033642 2.133805 0.8618043 0.877464 0.7827854 GAU25616.1 hypothetical protein TSUD_49680 [Trifolium subterraneum] Q9SK32|MAIL1_ARATH Protein MAIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=MAIL1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: nucleus (GO:0005634);|Molecular Function: transaminase activity (GO:0008483);|Biological Process: meristem maintenance (GO:0010073);|Biological Process: regulation of root meristem growth (GO:0010082);|Biological Process: gene silencing (GO:0016458); PF10536.8 Plant mobile domain TRINITY_DN20062_c0_g1_i5 33.51575959 65.52492412 1.506595062 0.022992702 -5.442680167 3.15E-17 8.63E-16 Down 3.686439 5.059189 4.557177 0.1096011 0 0.115384 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20062_c0_g2_i2 206.5073405 351.9457901 61.0688909 0.17351789 -2.52684368 6.22E-37 4.48E-35 Down 14.57713 15.16729 14.90218 1.481858 1.690477 3.093935 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20063_c0_g2_i1 28.77663101 43.06679859 14.48646344 0.33637196 -1.571870649 0.001283876 0.006513072 Down 3.463863 5.294783 5.490476 1.804284 0.8921646 1.188324 PON70500.1 DNA helicase Pif1-like [Trema orientale] -- -- -- -- -- -- -- -- KOG0987 DNA helicase PIF1/RRM3 [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " S ENOG410Y4KS helicase-like protein -- -- -- TRINITY_DN20073_c0_g3_i3 35.81636383 68.33569289 3.297034761 0.048247623 -4.373398317 5.99E-12 1.08E-10 Down 5.239876 8.735828 5.402364 0.6135841 0.1618598 7.01E-81 XP_011092342.1 uncharacterized protein LOC105172555 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG1981 SOK1 kinase belonging to the STE20/SPS1/GC kinase family [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms -- -- -- -- -- -- TRINITY_DN20077_c0_g1_i1 155.5619708 247.6320678 63.49187388 0.256396009 -1.96355429 3.51E-19 1.09E-17 Down 9.089175 8.71149 9.485771 2.444121 1.493938 1.703707 XP_011079428.1 CBL-interacting serine/threonine-protein kinase 6 [Sesamum indicum] O65554|CIPK6_ARATH CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana OX=3702 GN=CIPK6 PE=1 SV=1 -- -- -- -- -- -- KOG0583 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: signal transduction (GO:0007165);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to salt stress (GO:0009651);|Biological Process: basipetal auxin transport (GO:0010540);|Biological Process: hyperosmotic salinity response (GO:0042538); "PF00069.24,PF07714.16,PF03822.13,PF14531.5" Protein kinase domain|Protein tyrosine kinase|NAF domain|Kinase-like TRINITY_DN20086_c0_g2_i1 9.823464212 4.604890231 15.04203819 3.266535669 1.707761394 0.042722782 0.125061931 Up 1.357133 0.440368 0.3564886 1.571384 1.041197 3.084574 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20086_c0_g3_i1 24.04194671 14.02014408 34.06374934 2.429629051 1.280736064 0.012317071 0.045301315 Up 3.042721 1.488958 0.9237448 3.401452 2.379697 4.809211 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20086_c1_g6_i1 14.30187093 28.60374186 0 0 #NAME? 1.62E-09 2.25E-08 Down 2.97164 3.848028 2.41566 9.11E-89 3.69E-62 1.95E-75 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20086_c1_g7_i2 16.21372028 25.73424396 6.693196599 0.26008911 -1.942922102 0.003395045 0.01519236 Down 3.12156 2.284319 4.86136 0.7026777 0.7005684 0.7866162 -- -- -- -- sind:105159138 K13126 PABPC polyadenylate-binding protein ko03018|ko03015|ko03013 RNA degradation|mRNA surveillance pathway|RNA transport -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20087_c0_g1_i3 39.03044135 57.24256721 20.8183155 0.363685916 -1.459235037 0.000736624 0.003979243 Down 2.717615 2.994423 3.511801 0.4498513 0.4481962 1.817891 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20093_c1_g1_i1 6.411158805 12.82231761 0 0 #NAME? 0.000291866 0.001746927 Down 1.034794 4.048425 2.005163 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20093_c1_g2_i3 631.5197044 404.4681277 858.5712812 2.122716779 1.085911894 6.46E-22 2.39E-20 Up 16.27642 16.77236 15.39202 29.33314 26.23546 27.42449 XP_012840952.1 PREDICTED: UDP-glycosyltransferase 86A1-like [Erythranthe guttata] Q9SJL0|U86A1_ARATH UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana OX=3702 GN=UGT86A1 PE=2 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN200_c0_g1_i1 5.316071289 9.860565884 0.771576693 0.078248724 -3.675788973 0.010238309 0.038819544 Down 1.123492 1.919743 1.48703 0 0 0.2573462 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20103_c0_g2_i7 223.6912242 133.9567415 313.425707 2.339753143 1.226356326 0.000119592 0.000779573 Up 9.021395 7.86417 11.71612 22.89832 15.60021 15.54704 XP_012848427.1 PREDICTED: uncharacterized protein LOC105968344 [Erythranthe guttata] Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24,PF01657.16" Protein tyrosine kinase|Protein kinase domain|Salt stress response/antifungal TRINITY_DN20103_c0_g3_i2 47.39948405 30.70038931 64.0985788 2.087875113 1.062035419 0.013401354 0.048662285 Up 7.482102 2.935673 3.003884 9.616657 6.857824 6.025157 EYU28928.1 hypothetical protein MIMGU_mgv1a010894mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20103_c0_g5_i1 60.00102578 36.82849073 83.17356082 2.258402643 1.175302722 0.000487809 0.002764086 Up 1.099258 2.813081 1.803225 3.633765 2.731682 4.14731 XP_012848427.1 PREDICTED: uncharacterized protein LOC105968344 [Erythranthe guttata] Q8W4G6|CRK15_ARATH Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana OX=3702 GN=CRK15 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021); "PF01657.16,PF00069.24,PF07714.16" Salt stress response/antifungal|Protein kinase domain|Protein tyrosine kinase TRINITY_DN20104_c0_g1_i2 23.32972505 13.48750033 33.17194978 2.459458682 1.298340819 0.011652679 0.043229 Up 2.063948 1.489051 0.631846 3.104137 2.066219 3.127582 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20104_c1_g1_i8 236.4186249 316.6188615 156.2183882 0.493395711 -1.019182921 2.17E-09 2.98E-08 Down 13.92927 14.55201 16.50695 6.286284 4.704966 6.953223 XP_011092302.1 60S ribosomal protein L3-2 [Sesamum indicum] P35684|RL3_ORYSJ 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL3 PE=2 SV=2 sind:105172529 K02925 "RP-L3e, RPL3" large subunit ribosomal protein L3e ko03010 Ribosome KOG0746 60S ribosomal protein L3 and related proteins [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0087 "One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity)" Biological Process: ribosomal large subunit assembly (GO:0000027);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); -- -- TRINITY_DN20104_c1_g2_i3 44.69020026 28.1881535 61.19224702 2.170849787 1.118259901 0.003197559 0.014429543 Up 3.358775 2.50712 2.450787 5.090483 4.878519 4.274751 KZV54355.1 hypothetical protein F511_03610 [Dorcoceras hygrometricum] Q10LJ2|MTP2_ORYSJ Metal tolerance protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP2 PE=2 SV=1 -- -- -- -- -- -- KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [P] METABOLISM Inorganic ion transport and metabolism P COG0053 cation diffusion facilitator family transporter Cellular Component: vacuolar membrane (GO:0005774);|Molecular Function: cation transmembrane transporter activity (GO:0008324);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN20104_c1_g3_i1 8.1779295 15.19849396 1.15736504 0.076149982 -3.715012496 0.001293804 0.006554649 Down 1.018754 2.960924 3.946667 0 0 0.5440378 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20104_c1_g4_i1 20.77021748 41.54043496 0 0 #NAME? 1.63E-13 3.36E-12 Down 3.778246 4.086339 2.598733 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20108_c0_g1_i3 135.7263782 88.96920234 182.4835541 2.051086773 1.036388527 2.93E-06 2.61E-05 Up 4.776483 4.48568 4.241357 7.852809 6.972405 7.553448 XP_011082870.1 gibberellin 2-beta-dioxygenase 1-like [Sesamum indicum] Q9SQ80|G2OX1_PEA Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum OX=3888 GN=GA2OX1 PE=1 SV=1 sind:105165523 K04125 E1.14.11.13 gibberellin 2-oxidase ko00904 Diterpenoid biosynthesis KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: gibberellin biosynthetic process (GO:0009686);|Molecular Function: gibberellin 2-beta-dioxygenase activity (GO:0045543);|Molecular Function: metal ion binding (GO:0046872); "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN20110_c0_g2_i1 27.25498209 42.3016725 12.20829168 0.288600685 -1.792853368 0.000419864 0.00241987 Down 2.485317 1.576063 2.95048 0.8040043 0.4220335 0.3627126 PNX79113.1 "ribonuclease H, partial [Trifolium pratense]" P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN20110_c0_g3_i2 62.73225129 91.25576995 34.20873263 0.374866517 -1.415551125 2.25E-05 0.000170575 Down 1.946732 2.575002 1.887526 0.5944884 0.6565329 0.68352 PNX92269.1 cysteine-rich receptor-like protein kinase [Trifolium pratense] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111K5V Reverse transcriptase (RNA-dependent DNA polymerase) Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN20114_c0_g1_i5 100.1818619 200.3637238 0 0 #NAME? 5.21E-62 7.57E-60 Down 5.73551 5.245003 4.788798 0 0 0 XP_024634415.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Medicago truncatula] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); "PF05699.13,PF14372.5" hAT family C-terminal dimerisation region|Domain of unknown function (DUF4413) TRINITY_DN20127_c0_g2_i1 152.1579742 202.9666197 101.3493286 0.499339885 -1.001905947 3.02E-06 2.68E-05 Down 8.744484 8.84737 7.790656 4.018391 3.055937 3.169815 XP_011069735.1 uncharacterized protein LOC105155538 isoform X3 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111VBY NA -- -- -- TRINITY_DN20128_c0_g6_i1 8.462308585 15.06879209 1.855825084 0.123156858 -3.021431131 0.004376149 0.018918717 Down 2.378128 2.313879 1.162373 0.4847234 0.005008742 0.1738001 XP_012857635.1 PREDICTED: putative late blight resistance protein homolog R1A-4 [Erythranthe guttata] Q60CZ8|R1A10_SOLDE Putative late blight resistance protein homolog R1A-10 OS=Solanum demissum OX=50514 GN=R1A-10 PE=3 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Molecular Function: ADP binding (GO:0043531); "PF00931.21,PF13401.5" NB-ARC domain|AAA domain TRINITY_DN20129_c0_g1_i4 369.3784651 200.7262233 538.0307068 2.680420615 1.422459408 5.17E-23 2.02E-21 Up 9.42454 9.523757 10.86678 21.51471 21.91757 21.00904 XP_011100528.1 triacylglycerol lipase 2-like [Sesamum indicum] Q67ZU1|LIP2_ARATH Triacylglycerol lipase 2 OS=Arabidopsis thaliana OX=3702 GN=LIP2 PE=2 SV=1 -- -- -- -- -- -- KOG2624 Triglyceride lipase-cholesterol esterase [I] METABOLISM Lipid transport and metabolism S COG0596 Alpha beta hydrolase Biological Process: defense response to insect (GO:0002213);|Molecular Function: triglyceride lipase activity (GO:0004806);|Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: lipase activity (GO:0016298);|Biological Process: cellular lipid metabolic process (GO:0044255); "PF04083.15,PF00561.19" Partial alpha/beta-hydrolase lipase region|alpha/beta hydrolase fold TRINITY_DN20130_c0_g1_i1 14.37486421 21.3267874 7.422941019 0.348057158 -1.522603848 0.03538567 0.107744949 Down 2.74203 4.862973 2.456129 0.9423483 0.9786555 0.955458 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20130_c1_g1_i1 6.009192036 10.51178901 1.506595062 0.143324325 -2.802644612 0.023726641 0.077813987 Down 1.812161 2.135534 1.693313 0.3439463 0 0.3727492 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20130_c1_g3_i1 32.14131365 52.7309634 11.55166391 0.219067947 -2.190549682 0.00952337 0.036600993 Down 13.40694 4.897602 6.411578 1.609671 1.077725 1.580007 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20130_c2_g1_i5 129.9495948 175.8647543 84.03443532 0.477835571 -1.06541384 0.000134216 0.000866636 Down 4.951813 4.363272 3.390272 1.844993 1.041938 2.001802 XP_011075912.1 "pyridoxal reductase, chloroplastic [Sesamum indicum]" Q0JL44|SGT1_ORYSJ Protein SGT1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SGT1 PE=1 SV=1 sind:105160294 K05275 E1.1.1.65 pyridoxine 4-dehydrogenase ko00750 Vitamin B6 metabolism -- -- -- -- -- S COG5091 Suppressor of g2 allele of skp1 Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: defense response (GO:0006952);|Biological Process: regulation of protein stability (GO:0031647);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: protein stabilization (GO:0050821);|Biological Process: defense response to fungus (GO:0050832); -- -- TRINITY_DN20130_c2_g2_i1 10.63614848 21.27229697 0 0 #NAME? 2.49E-07 2.61E-06 Down 2.491227 2.760673 3.627537 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20136_c0_g1_i1 278.7356783 403.0190069 154.4523496 0.383238376 -1.383686061 2.26E-17 6.22E-16 Down 21.97598 18.6763 19.5618 6.117543 5.732211 6.809547 XP_011077072.1 GDSL esterase/lipase At5g33370 [Sesamum indicum] Q9M8Y5|LTL1_ARATH GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana OX=3702 GN=LTL1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG3240 GDSL esterase lipase "Cellular Component: extracellular region (GO:0005576);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: response to lithium ion (GO:0010226);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);|Biological Process: hyperosmotic salinity response (GO:0042538);" PF00657.21 GDSL-like Lipase/Acylhydrolase TRINITY_DN20140_c2_g2_i1 33.36501861 9.266110211 57.46392702 6.201515599 2.632620841 1.05E-07 1.15E-06 Up 0.5527133 0.2682799 1.18673 3.623447 2.616015 4.209466 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20140_c3_g2_i1 34.23007925 22.35334856 46.10680993 2.062635484 1.044488886 0.031550645 0.098227035 Up 1.013729 1.399472 3.934719 3.207354 3.636461 3.771197 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20140_c3_g3_i1 27.18894779 47.36711265 7.010782928 0.148009506 -2.756238261 0.005620181 0.023421531 Down 13.10521 4.789859 5.573945 0.2852853 1.697098 0.8320965 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20141_c1_g4_i1 11.34694666 3.432986436 19.26090688 5.610539757 2.488139571 0.002012004 0.00968617 Up 0 1.611592 0 2.4088 2.616982 2.048332 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20142_c1_g3_i1 5.605668497 11.21133699 0 0 #NAME? 0.01711618 0.059436564 Down 4.267476 0.5936298 1.412711 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2014_c0_g1_i1 20.48245251 7.699461437 33.26544359 4.320489668 2.111194831 0.013445602 0.048790245 Up 0.6710244 0 3.030908 2.224631 4.555412 5.984973 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20151_c0_g1_i2 74.56209648 41.04019479 108.0839982 2.633613186 1.397043464 3.81E-06 3.32E-05 Up 2.216348 2.202302 2.334694 5.09074 4.587683 4.65438 XP_011089640.1 uncharacterized protein LOC105170537 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKZJ Protein of unknown function (DUF506) -- PF04720.11 PDDEXK-like family of unknown function TRINITY_DN20156_c0_g2_i1 86.55910464 49.36907206 123.7491372 2.506612583 1.325739033 0.023776473 0.077932373 Up 6.935013 3.579991 2.203793 6.38251 6.452575 13.03742 EYU23339.1 hypothetical protein MIMGU_mgv1a012962mg [Erythranthe guttata] -- -- sind:105179150 K00940 "ndk, NME" nucleoside-diphosphate kinase ko00230|ko00240 Purine metabolism|Pyrimidine metabolism -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20165_c0_g2_i1 44.99802639 65.58300468 24.41304809 0.372246563 -1.425669566 0.008670603 0.033839283 Down 19.03734 9.656006 12.23081 1.989805 6.467437 3.711959 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20165_c1_g4_i1 12.19479276 3.176543112 21.21304241 6.678027549 2.739422045 0.001122527 0.005783097 Up 1.329401 0.000132193 0.1034173 1.099629 3.239004 2.992059 XP_022866500.1 protein DETOXIFICATION 24-like [Olea europaea var. sylvestris] Q8W488|DTX21_ARATH Protein DETOXIFICATION 21 OS=Arabidopsis thaliana OX=3702 GN=DTX21 PE=1 SV=1 sind:105155910 K03327 "TC.MATE, SLC47A, norM, mdtK, dinF" "multidrug resistance protein, MATE family" -- -- KOG1347 "Uncharacterized membrane protein, predicted efflux pump" [R] POORLY CHARACTERIZED General function prediction only V COG0534 Mate efflux family protein Biological Process: drug transmembrane transport (GO:0006855);|Molecular Function: drug transmembrane transporter activity (GO:0015238);|Molecular Function: antiporter activity (GO:0015297);|Cellular Component: integral component of membrane (GO:0016021); PF01554.17 MatE TRINITY_DN20171_c0_g1_i2 454.4891264 302.5097035 606.4685493 2.004790399 1.003451411 6.86E-15 1.57E-13 Up 13.65404 14.56533 13.53935 21.80206 23.34379 22.42756 EYU27919.1 hypothetical protein MIMGU_mgv1a026885mg [Erythranthe guttata] Q84WQ5|CBSX5_ARATH CBS domain-containing protein CBSX5 OS=Arabidopsis thaliana OX=3702 GN=CBSX5 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111QFC CBS domain-containing protein -- PF00571.27 CBS domain TRINITY_DN20176_c0_g4_i1 8.441861053 16.88372211 0 0 #NAME? 6.44E-06 5.39E-05 Down 1.173628 3.163408 2.470711 3.43E-47 5.15E-53 3.21E-49 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20176_c0_g5_i1 24.44461878 48.88923757 0 0 #NAME? 7.13E-16 1.76E-14 Down 8.471415 5.296602 6.166987 4.90E-36 8.59E-35 4.66E-60 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20176_c0_g7_i2 137.3899036 210.9564511 63.82335612 0.302542803 -1.724788827 0.000145272 0.000932322 Down 32.40219 34.26684 17.44751 6.249365 5.793705 8.609496 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20180_c1_g1_i6 44.15284951 26.67403347 61.63166555 2.310549157 1.208235783 0.002053443 0.009859524 Up 1.468455 1.208575 1.370175 2.424431 1.953911 3.236667 XP_011092755.1 ferric reduction oxidase 2 isoform X2 [Sesamum indicum] Q9LMM2|FRO1_ARATH Probable ferric reduction oxidase 1 OS=Arabidopsis thaliana OX=3702 GN=FRO1 PE=2 SV=1 -- -- -- -- -- -- KOG0039 "Ferric reductase, NADH/NADPH oxidase and related proteins" [PQ] METABOLISM|METABOLISM "Inorganic ion transport and metabolism |Secondary metabolites biosynthesis, transport and catabolism " U ENOG410XNZY NADPH Oxidase Molecular Function: ferric-chelate reductase activity (GO:0000293);|Biological Process: ion transport (GO:0006811);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN20184_c0_g1_i7 62.74877628 102.5249955 22.97255705 0.224067867 -2.157992325 4.59E-10 6.80E-09 Down 3.184667 3.288127 3.150733 0.716722 0.5337399 0.4735969 CDP22256.1 unnamed protein product [Coffea canephora] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20194_c0_g2_i2 773.0885345 459.6900995 1086.486969 2.36352049 1.240937372 2.00E-19 6.33E-18 Up 35.13246 39.98654 37.77317 78.1505 72.97819 64.03682 PIN23264.1 hypothetical protein CDL12_04030 [Handroanthus impetiginosus] Q9LUV2|POP3_ARATH Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana OX=3702 GN=HS1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111U5X stress responsive alpha-beta barrel domain-containing protein Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: pollen tube adhesion (GO:0009865);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: defense response to fungus (GO:0050832); PF07876.11 Stress responsive A/B Barrel Domain TRINITY_DN20194_c0_g3_i2 16.24147331 7.302877138 25.18006947 3.447965644 1.785745399 0.004191028 0.018227781 Up 2.864216 0.3454222 0.2784252 3.842793 3.183536 2.50528 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20196_c1_g1_i1 51.91583205 70.48711128 33.34455282 0.473058864 -1.07990838 0.002545138 0.011850595 Down 4.048032 4.968148 4.129133 1.697525 0.9728833 2.34801 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20196_c1_g2_i2 26.76890741 49.11751602 4.420298793 0.089994347 -3.474021804 5.35E-09 6.99E-08 Down 3.247663 2.74014 2.14763 0.242068 0.2455165 0.08579258 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20196_c1_g4_i2 29.55301079 44.46277695 14.64324463 0.329337159 -1.602362796 0.000959423 0.005033646 Down 7.126188 5.87777 6.448616 1.734484 0.9435899 2.564371 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20199_c1_g2_i1 30.43113702 10.91429319 49.94798085 4.576382548 2.194207655 3.11E-06 2.76E-05 Up 1.003233 1.289972 0.1677391 3.350979 3.355771 2.358667 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20199_c1_g4_i1 46.22358519 5.40553751 87.04163287 16.10230855 4.009195634 7.72E-15 1.77E-13 Up 0.6731256 9.83E-14 2.872701 13.71411 12.11435 19.44792 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20199_c1_g7_i1 21.69997499 5.231749488 38.16820049 7.295494668 2.867005803 0.000808691 0.004328369 Up 0.6343092 6.39E-08 0.7968988 1.441668 3.003801 4.283195 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN201_c0_g1_i1 4.822608339 1.143301217 8.501915461 7.436286549 2.894582364 0.036625192 0.11062509 Up 0.3059749 0 0.2348942 1.336211 1.014869 0.7085741 XP_012827448.1 PREDICTED: ABC transporter C family member 12-like isoform X2 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20206_c0_g1_i1 43.95462691 16.55770766 71.35154615 4.309264761 2.10744174 2.25E-06 2.04E-05 Up 1.80226 1.383733 4.704013 6.679907 10.96311 10.06463 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20206_c0_g2_i1 45.81387835 62.97031816 28.65743854 0.45509439 -1.135762292 0.003379572 0.015136546 Down 1.656861 2.076371 1.526851 0.7095978 0.5331846 0.6837782 XP_022853451.1 subtilisin-like protease SBT3.6 isoform X3 [Olea europaea var. sylvestris] Q8L7I2|SBT36_ARATH Subtilisin-like protease SBT3.6 OS=Arabidopsis thaliana OX=3702 GN=SBT3.6 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576); "PF00082.21,PF05922.15" Subtilase family|Peptidase inhibitor I9 TRINITY_DN20206_c0_g3_i2 23.64134996 35.7180308 11.56466912 0.323776783 -1.626928555 0.002623678 0.012172591 Down 1.275514 1.591027 1.758637 0.3814502 0.3447635 0.4994031 XP_011089872.1 uncharacterized protein LOC105170693 [Sesamum indicum] Q6K5F8|CDKG1_ORYSJ Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKG-1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111QDI Alpha beta hydrolase fold protein Molecular Function: cyclin-dependent protein serine/threonine kinase activity (GO:0004693);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: protein phosphorylation (GO:0006468);|Molecular Function: RNA polymerase II CTD heptapeptide repeat kinase activity (GO:0008353); -- -- TRINITY_DN20207_c0_g1_i1 164.6119018 98.30977095 230.9140327 2.348841122 1.231949131 2.15E-09 2.95E-08 Up 2.991208 4.521652 3.957804 7.337046 7.394001 7.011506 XP_011085900.1 glutamate decarboxylase [Sesamum indicum] Q07346|DCE_PETHY Glutamate decarboxylase OS=Petunia hybrida OX=4102 GN=GAD PE=1 SV=1 sind:105167783 K01580 "E4.1.1.15, gadB, gadA, GAD" glutamate decarboxylase ko00410|ko00430|ko00650|ko00250 "beta-Alanine metabolism|Taurine and hypotaurine metabolism|Butanoate metabolism|Alanine, aspartate and glutamate metabolism" KOG1383 Glutamate decarboxylase/sphingosine phosphate lyase [E] METABOLISM Amino acid transport and metabolism E COG0076 decarboxylase Molecular Function: glutamate decarboxylase activity (GO:0004351);|Molecular Function: calmodulin binding (GO:0005516);|Biological Process: glutamate metabolic process (GO:0006536);|Molecular Function: pyridoxal phosphate binding (GO:0030170); "PF00282.18,PF00266.18" Pyridoxal-dependent decarboxylase conserved domain|Aminotransferase class-V TRINITY_DN20211_c0_g5_i2 55.84600516 27.73776217 83.95424814 3.0267131 1.59775193 0.00111859 0.005766742 Up 1.156861 0.904006 1.127656 1.518892 2.878053 3.419346 XP_012851758.1 PREDICTED: putative receptor-like protein kinase At5g39000 [Erythranthe guttata] Q9SR05|ANX1_ARATH Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana OX=3702 GN=ANX1 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410ZY1Z STYKc -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN20211_c0_g6_i1 20.42654003 9.132887849 31.7201922 3.473183152 1.796258491 0.002663673 0.012332936 Up 1.525659 0.1137225 1.178176 2.675875 2.038948 3.241642 XP_022880957.1 receptor-like protein kinase FERONIA [Olea europaea var. sylvestris] Q9SR05|ANX1_ARATH Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana OX=3702 GN=ANX1 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410ZY1Z STYKc -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN20213_c1_g2_i1 6.59068088 10.96330144 2.21806032 0.202316823 -2.305311806 0.042359727 0.124230204 Down 0.888841 1.916937 1.362648 0.4623046 0.152365 0.1581445 XP_012838583.1 PREDICTED: uncharacterized protein LOC105959098 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20214_c0_g1_i4 165.5512073 65.01159977 266.0908148 4.092974418 2.03314965 1.13E-21 4.10E-20 Up 4.680999 4.695891 5.773375 17.72982 17.75995 14.51018 PIN01593.1 hypothetical protein CDL12_25894 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZFI0 Sigma factor binding protein -- PF05678.13 VQ motif TRINITY_DN20222_c0_g1_i1 447.3153725 137.2067443 757.4240007 5.520311737 2.464749739 9.25E-71 1.59E-68 Up 5.402675 6.554296 5.435135 25.48243 26.73529 25.30901 PIN25046.1 Shikimate O-hydroxycinnamoyltransferase [Handroanthus impetiginosus] Q9SND9|Y3028_ARATH Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana OX=3702 GN=At3g50280 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YADF transferase) family "Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);" PF02458.14 Transferase family TRINITY_DN20232_c0_g1_i1 14.74287423 25.76636702 3.719381433 0.144350247 -2.792354523 0.000375473 0.002187912 Down 4.103424 1.533293 3.109197 0.4706681 0.2366105 0.3714123 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20232_c1_g1_i5 30.36564178 18.79994343 41.93134013 2.230397144 1.157300619 0.01388141 0.050116825 Up 0.9770166 0.6644414 0.8782997 1.664754 1.496175 1.419237 XP_011083766.1 wall-associated receptor kinase-like 14 [Sesamum indicum] Q8RY67|WAKLO_ARATH Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana OX=3702 GN=WAKL14 PE=2 SV=2 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN20232_c1_g2_i1 17.0422359 9.209342758 24.87512904 2.701075385 1.433533905 0.025695267 0.083034473 Up 0.6065848 1.303474 1.037515 2.064356 2.434911 2.172782 PIN15831.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q8RY67|WAKLO_ARATH Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana OX=3702 GN=WAKL14 PE=2 SV=2 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- PF13947.5 Wall-associated receptor kinase galacturonan-binding TRINITY_DN20232_c2_g1_i1 31.23874633 12.83163561 49.64585705 3.869020175 1.951968252 3.01E-05 0.00022276 Up 1.380286 0.7109891 0.6982385 3.14611 3.105301 2.436157 PIN15831.1 Serine/threonine protein kinase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN20233_c2_g2_i1 5.043337323 8.984147093 1.102527553 0.122719223 -3.026566838 0.029040256 0.091798352 Down 0.5009436 1.475518 1.574547 0.3573122 0 2.61E-33 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20233_c2_g3_i1 8.824885382 15.83859459 1.811176178 0.114352076 -3.128445533 0.003119198 0.014129306 Down 2.010488 2.054786 0.7739157 0 0.4576163 7.91E-33 PIN05865.1 hypothetical protein CDL12_21593 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKJ1 Tetratricopeptide repeat -- -- -- TRINITY_DN20233_c2_g7_i1 337.8596118 177.2033703 498.5158533 2.813241375 1.492233341 7.38E-24 3.03E-22 Up 33.20248 33.85968 29.08829 64.5355 76.30242 77.2971 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20235_c0_g1_i3 330.2939799 454.8670019 205.720958 0.452266173 -1.144756002 1.44E-14 3.21E-13 Down 10.28948 9.716687 11.11805 3.790093 3.854114 3.730647 XP_011096562.1 dammarenediol II synthase-like [Sesamum indicum] Q08IT1|DADIS_PANGI Dammarenediol II synthase OS=Panax ginseng OX=4054 GN=PNA PE=1 SV=1 sind:105175714 K15813 LUP4 beta-amyrin synthase ko00909 Sesquiterpenoid and triterpenoid biosynthesis KOG0497 Oxidosqualene-lanosterol cyclase and related proteins [I] METABOLISM Lipid transport and metabolism I COG1657 Squalene--hopene cyclase Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: lyase activity (GO:0016829);|Molecular Function: intramolecular transferase activity (GO:0016866); "PF13243.5,PF13249.5,PF00432.20" Squalene-hopene cyclase C-terminal domain|Squalene-hopene cyclase N-terminal domain|Prenyltransferase and squalene oxidase repeat TRINITY_DN20238_c0_g1_i2 3121.951407 2057.940825 4185.961989 2.034053622 1.024357712 2.84E-49 3.03E-47 Up 108.8122 103.2717 104.8592 171.918 170.4595 177.9288 PIN22395.1 G protein beta subunit-like protein [Handroanthus impetiginosus] P93340|GBLP_NICPL Guanine nucleotide-binding protein subunit beta-like protein OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1 -- -- -- -- -- -- KOG0279 G protein beta subunit-like protein [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XQGZ guanine nucleotidebinding protein Cellular Component: ribosome (GO:0005840); "PF00400.31,PF12894.6" "WD domain, G-beta repeat|Anaphase-promoting complex subunit 4 WD40 domain" TRINITY_DN20255_c0_g1_i1 5.858469133 0.624179352 11.09275891 17.77174922 4.151513784 0.002249262 0.010643256 Up 1.20E-39 0.297669 4.81E-40 2.591662 1.218303 1.095556 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20255_c1_g10_i1 5.168031364 0.312089676 10.02397305 32.11888705 5.005349998 0.00190637 0.009226556 Up 0 0.1365033 0 0.488851 1.043178 0.8527578 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20255_c1_g1_i1 11.65825656 0 23.31651312 Inf Inf 1.10E-08 1.38E-07 Up 0 0 5.32E-48 1.932339 1.49806 1.151802 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20255_c1_g4_i1 24.5526504 48.35727721 0.748023582 0.015468687 -6.014505452 9.08E-14 1.91E-12 Down 3.674625 4.350972 4.926534 0 0.07403625 0.09851676 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20255_c1_g8_i2 29.18619821 0 58.37239641 Inf Inf 9.14E-21 3.14E-19 Up 2.42E-21 0 2.94E-49 3.165609 3.689265 3.752282 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20255_c1_g9_i1 10.75653411 0 21.51306821 Inf Inf 4.75E-08 5.48E-07 Up 3.36E-31 7.32E-63 2.48E-46 1.77929 1.299388 1.253152 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20263_c0_g1_i3 31.28340043 56.98913703 5.577663833 0.097872404 -3.352954056 0.005105972 0.021562509 Down 3.478975 15.28822 7.72629 0.6912891 0.6892332 0.7349981 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20263_c2_g4_i1 12.01099555 22.18971912 1.832271973 0.082573013 -3.598185836 0.001546078 0.00767796 Down 7.551004 2.469385 3.958458 0.7062456 0.1029376 0.09682442 GAU35153.1 hypothetical protein TSUD_217860 [Trifolium subterraneum] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein -- PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN20267_c0_g4_i1 43.40007119 27.85478274 58.94535964 2.116166555 1.081453181 0.005501966 0.022995836 Up 1.951299 2.524105 2.12935 3.816164 4.055238 3.352238 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20272_c1_g2_i4 422.1134861 580.7826437 263.4443285 0.453602275 -1.140500218 3.01E-17 8.25E-16 Down 10.74671 12.0109 10.45018 4.239863 3.587134 4.334764 CDP03495.1 unnamed protein product [Coffea canephora] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20277_c0_g1_i1 226.0857565 57.95716106 394.2143518 6.801823012 2.765921467 3.22E-47 3.23E-45 Up 3.278853 3.626533 3.438928 18.45314 19.12956 19.26579 PIN01324.1 hypothetical protein CDL12_26170 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YTJH NA -- -- -- TRINITY_DN20279_c0_g1_i10 116.8129983 183.8834697 49.74252682 0.270511139 -1.886240094 5.00E-14 1.07E-12 Down 6.382119 6.390123 6.704135 1.416025 1.468154 1.384988 XP_012844847.1 "PREDICTED: uncharacterized protein LOC105964883, partial [Erythranthe guttata]" Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=3 SV=2 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN20285_c1_g2_i1 4.076686628 8.153373256 0 0 #NAME? 0.00428588 0.018586887 Down 1.792839 0.6929172 0.6801271 4.00E-67 1.02E-47 1.78E-58 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20292_c2_g1_i2 10.97395722 19.7038437 2.244070747 0.113889999 -3.134287025 0.049642783 0.140879092 Down 6.07694 1.248035 2.008077 0 0.4378731 0.4131061 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20292_c2_g2_i2 36.48016098 56.3531866 16.60713536 0.294697361 -1.762693955 0.005609781 0.023385507 Down 7.311695 7.659374 3.107594 0.8684417 2.362424 1.115218 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20300_c1_g1_i2 57.1981321 84.75933761 29.63692659 0.349659724 -1.515976468 1.12E-05 8.98E-05 Down 3.015859 4.054281 4.478982 1.237568 1.121675 0.9090097 XP_011071911.1 transcription factor MYB86 [Sesamum indicum] Q8LPH6|MYB86_ARATH Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1 sind:105157247 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of stomatal movement (GO:0010119);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212); "PF00249.30,PF13921.5" Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN20305_c0_g1_i1 214.7675596 344.651478 84.88364127 0.246288343 -2.021579752 2.50E-26 1.17E-24 Down 10.74822 12.52392 10.73257 2.217783 2.532431 2.014179 XP_022855199.1 BTB/POZ domain-containing protein At1g55760-like isoform X1 [Olea europaea var. sylvestris] Q680K8|Y1576_ARATH BTB/POZ domain-containing protein At1g55760 OS=Arabidopsis thaliana OX=3702 GN=At1g55760 PE=2 SV=1 -- -- -- -- -- -- KOG1987 "Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains" [DR] CELLULAR PROCESSES AND SIGNALING|POORLY CHARACTERIZED "Cell cycle control, cell division, chromosome partitioning |General function prediction only " S ENOG410XQV8 meprin and TRAF homology domain-containing protein MATH domain-containing protein Biological Process: protein ubiquitination (GO:0016567); PF00651.30 BTB/POZ domain TRINITY_DN20307_c0_g1_i2 89.0160595 144.1202362 33.91188278 0.235302714 -2.087410132 4.80E-13 9.52E-12 Down 5.05341 4.680707 5.072227 0.8581528 0.8515414 1.087834 XP_011084946.1 laccase-4 [Sesamum indicum] Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC22 PE=2 SV=2 sind:105167080 K05909 E1.10.3.2 laccase -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase "Molecular Function: copper ion binding (GO:0005507);|Molecular Function: oxidoreductase activity, oxidizing metal ions (GO:0016722);|Biological Process: lignin catabolic process (GO:0046274);|Cellular Component: apoplast (GO:0048046);|Molecular Function: hydroquinone:oxygen oxidoreductase activity (GO:0052716);" "PF00394.21,PF07731.13,PF07732.14" Multicopper oxidase|Multicopper oxidase|Multicopper oxidase TRINITY_DN20308_c0_g2_i2 502.8439438 693.5656647 312.1222228 0.450025482 -1.1519214 5.38E-20 1.75E-18 Down 82.95817 89.20047 80.97396 29.06395 33.15919 29.68294 XP_011084978.1 7-deoxyloganetic acid glucosyltransferase-like [Sesamum indicum] U3U992|UGT8_CATRO 7-deoxyloganetic acid glucosyltransferase OS=Catharanthus roseus OX=4058 GN=UGT709C2 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glucosyltransferase activity (GO:0035251);|Molecular Function: 7-deoxyloganetic acid glucosyltransferase activity (GO:0102970);|Biological Process: (-)-secologanin biosynthetic process (GO:1900994); -- -- TRINITY_DN20309_c0_g2_i1 127.9333735 191.0542456 64.81250137 0.339236122 -1.559638298 4.28E-11 7.12E-10 Down 6.408908 5.801034 6.204833 2.061093 1.612157 1.344404 XP_011084865.1 laccase-12 [Sesamum indicum] Q9SIY8|LAC5_ARATH Laccase-5 OS=Arabidopsis thaliana OX=3702 GN=LAC5 PE=2 SV=1 sind:105167012 K05909 E1.10.3.2 laccase -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase "Molecular Function: copper ion binding (GO:0005507);|Molecular Function: oxidoreductase activity, oxidizing metal ions (GO:0016722);|Biological Process: lignin catabolic process (GO:0046274);|Biological Process: response to copper ion (GO:0046688);|Cellular Component: apoplast (GO:0048046);|Molecular Function: hydroquinone:oxygen oxidoreductase activity (GO:0052716);" "PF07732.14,PF07731.13,PF00394.21" Multicopper oxidase|Multicopper oxidase|Multicopper oxidase TRINITY_DN20309_c0_g3_i1 205.1675951 288.6528208 121.6823694 0.421552677 -1.246215174 1.20E-11 2.11E-10 Down 8.240853 8.377702 10.04571 3.168672 2.64921 3.232912 XP_011076646.1 laccase-12 [Sesamum indicum] Q9SIY8|LAC5_ARATH Laccase-5 OS=Arabidopsis thaliana OX=3702 GN=LAC5 PE=2 SV=1 sind:105160846 K05909 E1.10.3.2 laccase -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase "Molecular Function: copper ion binding (GO:0005507);|Molecular Function: oxidoreductase activity, oxidizing metal ions (GO:0016722);|Biological Process: lignin catabolic process (GO:0046274);|Biological Process: response to copper ion (GO:0046688);|Cellular Component: apoplast (GO:0048046);|Molecular Function: hydroquinone:oxygen oxidoreductase activity (GO:0052716);" "PF07732.14,PF07731.13,PF00394.21" Multicopper oxidase|Multicopper oxidase|Multicopper oxidase TRINITY_DN20310_c0_g1_i1 22.84007232 31.23059885 14.44954579 0.46267271 -1.111936089 0.042713268 0.125060119 Down 4.227088 5.84822 5.149509 1.682075 2.242192 1.750792 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20313_c0_g1_i4 10.86245379 19.07922664 2.64568094 0.138668144 -2.850291701 0.001452097 0.007263364 Down 3.02681 1.315704 1.961336 0.2692118 0 0.4400839 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20315_c0_g1_i2 359.549465 124.3090928 594.7898371 4.784765326 2.258448168 7.54E-51 8.40E-49 Up 5.884527 5.826696 5.934347 24.78072 22.42309 21.00721 KZV23617.1 hypothetical protein F511_24026 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z3DC Domain-Containing protein -- "PF03107.15,PF00628.28,PF00130.21" C1 domain|PHD-finger|Phorbol esters/diacylglycerol binding domain (C1 domain) TRINITY_DN20318_c0_g1_i1 573.5088794 363.8261109 783.1916479 2.152653767 1.106116295 6.20E-21 2.17E-19 Up 14.99769 14.04486 14.73202 25.40584 25.6847 24.97321 AFS65006.1 transparent testa [Salvia miltiorrhiza] Q9XGN1|TTG1_ARATH Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 SV=1 sind:105160272 K11805 "WDR68, HAN11" WD repeat-containing protein 68 -- -- KOG0290 Conserved WD40 repeat-containing protein AN11 [S] POORLY CHARACTERIZED Function unknown S ENOG410XQ78 ddb1 and cul4 associated factor 7 Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: response to ethylene (GO:0009723);|Biological Process: response to auxin (GO:0009733);|Biological Process: epidermal cell fate specification (GO:0009957);|Biological Process: trichome differentiation (GO:0010026);|Biological Process: regulation of protein localization (GO:0032880);|Biological Process: cell fate commitment (GO:0045165); PF00400.31 "WD domain, G-beta repeat" TRINITY_DN20330_c0_g1_i1 20.79624002 4.182663775 37.40981627 8.944017084 3.160922944 0.008167584 0.032186847 Up 0.0007801 0.01049494 2.53315 10.50661 3.720498 4.31712 XP_011092463.1 uncharacterized protein LOC105172637 [Sesamum indicum] Q8S904|MFDX2_ARATH "Adrenodoxin-like protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MFDX2 PE=2 SV=1" -- -- -- -- -- -- KOG3309 Ferredoxin [C] METABOLISM Energy production and conversion C COG0633 Ferredoxin "Cellular Component: mitochondrion (GO:0005739);|Molecular Function: electron transfer activity (GO:0009055);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);" -- -- TRINITY_DN20334_c0_g1_i1 18.08803542 33.56976485 2.606305982 0.077638494 -3.687084059 3.73E-05 0.000271296 Down 4.109793 1.496769 3.689607 1.04E-46 0.2820683 0.276042 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2033_c0_g1_i1 5.368081493 1.116257443 9.619905544 8.617999013 3.107352933 0.019751047 0.067108869 Up 0 0.4510808 0.367874 1.312848 2.201973 1.40923 XP_011080162.1 B3 domain-containing transcription factor ABI3 isoform X3 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20340_c0_g2_i1 27.16465541 17.24061615 37.08869467 2.151239512 1.105168158 0.033919744 0.10419699 Up 2.573439 2.002334 4.356832 5.839664 4.851976 4.474704 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20344_c0_g1_i1 31.93440121 46.22009893 17.64870349 0.381840453 -1.388958144 0.009623593 0.036887198 Down 1.889726 3.002289 4.0852 1.128661 0.2589913 1.332678 PIN13964.1 5-formyltetrahydrofolate cyclo-ligase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- E COG3643 Glutamate formiminotransferase -- PF07837.11 "Formiminotransferase domain, N-terminal subdomain" TRINITY_DN20348_c0_g2_i1 11.00041807 4.83740739 17.16342875 3.548063533 1.827031843 0.022322191 0.074091196 Up 1.452428 0.6920874 0.5688683 3.055392 1.556023 2.962185 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20357_c0_g1_i2 76.49301045 6.39321418 146.5928067 22.92943777 4.519129076 1.09E-33 7.02E-32 Up 0.3671281 0.1574584 0.2743457 5.366065 4.987635 4.730614 XP_021681924.1 uncharacterized protein LOC110665926 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41122DF NA -- "PF07468.10,PF03318.12" Agglutinin domain|Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 TRINITY_DN20360_c0_g2_i2 43.17313332 22.53153248 63.81473416 2.832241181 1.501944124 0.000333989 0.001973802 Up 3.023316 0.4931969 2.169562 5.339941 3.807919 3.771837 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20361_c3_g2_i2 32.76135667 21.44960548 44.07310785 2.054728134 1.03894752 0.020638953 0.069557056 Up 1.046128 1.266077 1.132495 1.733193 2.357484 1.689101 XP_011097335.1 F-box protein At3g07870-like [Sesamum indicum] Q9SU30|CPR1_ARATH F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z6XY FBOX Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: negative regulation of defense response (GO:0031348);|Biological Process: negative regulation of protein catabolic process (GO:0042177); -- -- TRINITY_DN20361_c3_g6_i1 8.839872 17.31750876 0.362235236 0.020917283 -5.579160706 2.96E-05 0.000219391 Down 1.53037 1.416908 1.613717 1.64E-25 0.09307319 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20362_c0_g2_i1 22.39722737 31.64198332 13.15247142 0.415665203 -1.266506116 0.022561423 0.074748606 Down 5.307657 5.666385 4.511472 2.055602 0.5181072 2.580379 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20364_c0_g1_i4 321.3223381 206.4169291 436.2277472 2.11333319 1.079520242 5.54E-13 1.09E-11 Up 8.050802 8.696933 7.969086 13.68398 14.72907 13.74929 XP_011085179.1 berberine bridge enzyme-like 13 [Sesamum indicum] O64743|BBE15_ARATH Berberine bridge enzyme-like 15 OS=Arabidopsis thaliana OX=3702 GN=MEE23 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: polar nucleus fusion (GO:0010197);|Molecular Function: cinnamyl-alcohol dehydrogenase activity (GO:0045551);|Molecular Function: coniferyl-alcohol dehydrogenase activity (GO:0050268);|Molecular Function: sinapyl alcohol dehydrogenase activity (GO:0052747);|Molecular Function: FAD binding (GO:0071949); "PF01565.22,PF08031.11" FAD binding domain|Berberine and berberine like TRINITY_DN20368_c1_g3_i2 41.18176247 73.44453675 8.918988184 0.121438416 -3.041703221 1.84E-08 2.25E-07 Down 8.824759 7.528372 13.37484 0.8484271 1.008449 1.01571 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20369_c0_g2_i2 12.63535698 20.0711072 5.199606751 0.259059289 -1.948645783 0.014055565 0.050598223 Down 2.35726 3.189208 1.461656 0.1852765 0.7384807 0.5811664 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20375_c0_g1_i1 3.042883047 6.085766093 0 0 #NAME? 0.019034469 0.065092035 Down 1.264751 1.228273 0.4811948 0 0 6.15E-47 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20380_c0_g1_i1 183.8411186 71.58520524 296.0970319 4.136288091 2.048336672 2.97E-24 1.24E-22 Up 2.799677 3.361134 3.061166 9.798283 10.52413 10.41314 XP_011070832.1 myb family transcription factor EFM [Sesamum indicum] Q9FPE8|HHO3_ARATH Transcription factor HHO3 OS=Arabidopsis thaliana OX=3702 GN=HHO3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG4111TKR Myb family transcription factor "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);" PF00249.30 Myb-like DNA-binding domain TRINITY_DN20382_c0_g2_i1 1607.810982 785.8448604 2429.777104 3.091929752 1.628507542 4.60E-84 9.94E-82 Up 38.22036 36.532 39.9696 96.1048 97.08405 93.08053 AKT44367.1 carboxylesterase [Tectona grandis] O64640|CXE8_ARATH Probable carboxylesterase 8 OS=Arabidopsis thaliana OX=3702 GN=CXE8 PE=2 SV=1 -- -- -- -- -- -- KOG1515 Arylacetamide deacetylase [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms I COG0657 alpha beta hydrolase fold-3 domain protein Molecular Function: carboxylic ester hydrolase activity (GO:0052689); "PF07859.12,PF00135.27" alpha/beta hydrolase fold|Carboxylesterase family TRINITY_DN20384_c0_g3_i1 6.892236625 11.59523999 2.18923326 0.18880448 -2.405035095 0.035004197 0.10683423 Down 2.375375 1.649932 1.326008 0.380173 0.3791796 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20384_c0_g4_i2 160.5624199 54.14379212 266.9810477 4.930963223 2.301869493 1.82E-26 8.60E-25 Up 3.234775 2.227108 2.213201 10.15837 10.44995 10.0052 XP_011073597.1 uncharacterized protein LOC105158512 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111H2B Stress up-regulated Nod 19 -- PF07712.11 Stress up-regulated Nod 19 TRINITY_DN20384_c0_g5_i1 44.60410777 19.10471161 70.10350393 3.669435339 1.875558075 1.83E-06 1.68E-05 Up 1.067001 0.7233706 0.7563974 2.728732 2.482092 2.266646 XP_011073280.1 uncharacterized protein LOC105158279 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111H2B Stress up-regulated Nod 19 -- PF07712.11 Stress up-regulated Nod 19 TRINITY_DN20388_c0_g2_i3 65.7352235 38.81584198 92.65460501 2.387030663 1.255217099 5.40E-05 0.000380094 Up 2.210526 2.200663 1.303881 3.506215 3.431914 3.960676 XP_011098585.1 plant cysteine oxidase 2 isoform X2 [Sesamum indicum] Q8LGJ5|PCO2_ARATH Plant cysteine oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=PCO2 PE=1 SV=1 sind:105177220 K10712 ADO cysteamine dioxygenase ko00430 Taurine and hypotaurine metabolism KOG4281 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG4111Y3H 2-aminoethanethiol Biological Process: response to hypoxia (GO:0001666);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Molecular Function: cysteine dioxygenase activity (GO:0017172);|Biological Process: peptidyl-cysteine oxidation (GO:0018171);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: detection of hypoxia (GO:0070483); PF07847.11 PCO_ADO TRINITY_DN2038_c0_g1_i1 5.976829008 11.95365802 0 0 #NAME? 0.000250944 0.001524913 Down 2.033258 2.71125 2.168619 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20392_c2_g1_i1 30.03181225 43.37000797 16.69361654 0.38491154 -1.377401171 0.003843574 0.016907779 Down 2.910633 5.458204 4.622315 1.081605 1.624719 1.327949 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20392_c2_g2_i2 42.31272857 61.74831983 22.8771373 0.370490037 -1.432493348 0.001304344 0.006602886 Down 3.896737 2.970482 2.14656 0.9940117 0.420128 1.307217 XP_020258826.1 uncharacterized protein LOC109835253 [Asparagus officinalis] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111SG9 Reverse transcriptase (RNA-dependent DNA polymerase) -- -- -- TRINITY_DN20392_c3_g2_i1 30.95683543 51.51409805 10.39957282 0.201878189 -2.308443045 2.96E-06 2.64E-05 Down 2.616664 2.983601 3.428347 0.6632684 0.331688 0.4308711 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20392_c3_g3_i1 11.57446041 20.8524699 2.296450918 0.110128485 -3.182740422 0.000308606 0.001836703 Down 4.42521 4.042629 4.297288 0.2640952 0 0.9248071 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20396_c0_g4_i1 23.96917806 32.925145 15.01321113 0.455980107 -1.13295721 0.036680858 0.110752575 Down 4.886211 3.433394 2.915843 0.9978481 1.003112 2.154315 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20397_c0_g1_i4 107.6950527 211.2849356 4.10516978 0.019429543 -5.685604208 5.47E-53 6.48E-51 Down 10.22751 8.843167 8.705332 0.176488 0.08818829 0.1807187 XP_021639077.1 ABC transporter B family member 11-like [Hevea brasiliensis] Q9M1Q9|AB21B_ARATH ABC transporter B family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCB21 PE=1 SV=2 pop:POPTR_0014s10880g K05658 ABCB1 "ATP-binding cassette, subfamily B (MDR/TAP), member 1" ko02010 ABC transporters KOG0055 "Multidrug/pheromone exporter, ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1132 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: auxin efflux (GO:0010315);|Molecular Function: auxin influx transmembrane transporter activity (GO:0010328);|Molecular Function: auxin efflux transmembrane transporter activity (GO:0010329);|Biological Process: basipetal auxin transport (GO:0010540);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: auxin influx (GO:0060919);" -- -- TRINITY_DN20399_c1_g1_i1 290.6087489 581.2174977 0 0 #NAME? 6.77E-146 2.93E-143 Down 72.80432 67.10163 58.87682 4.65E-38 1.30E-44 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20399_c1_g2_i1 2349.390501 4622.634046 76.14695604 0.016472633 -5.923784978 0 0 Down 537.6916 575.7592 548.6898 7.771791 5.361148 8.941562 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20399_c1_g3_i2 12.87553541 20.28589859 5.465172226 0.269407451 -1.892138344 0.024372374 0.079569642 Down 4.317379 2.467517 1.647359 0.7132727 1.038174 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20399_c2_g2_i1 23.68946055 31.88450188 15.49441923 0.485954565 -1.041106663 0.049613849 0.140810394 Down 4.671471 5.677457 6.908392 2.010594 3.066953 1.537053 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20404_c1_g1_i2 102.3437757 146.7297703 57.95778101 0.39499674 -1.340087347 2.70E-07 2.81E-06 Down 18.17623 16.61473 17.06268 4.87143 5.965725 5.714088 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20404_c1_g3_i2 20.05379837 33.43759394 6.670002805 0.199476159 -2.325711766 0.035443421 0.107862913 Down 2.049994 8.748489 4.411296 2.054166 1.53E-18 0.4328644 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20412_c1_g1_i1 9.724803876 19.44960775 0 0 #NAME? 1.07E-06 1.03E-05 Down 3.195996 3.543413 3.207354 1.54E-26 0 4.28E-44 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20413_c0_g1_i1 66.29415659 36.17901842 96.40929475 2.6647847 1.414018976 7.02E-05 0.000481164 Up 9.199454 3.834961 1.906442 11.15429 11.32997 9.715288 PSR87970.1 F-box protein [Actinidia chinensis var. chinensis] Q9FH99|FB302_ARATH F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1 -- -- -- -- -- -- KOG1947 "Leucine rich repeat proteins, some proteins contain F-box" [R] POORLY CHARACTERIZED General function prediction only S ENOG4111IP9 LRR Biological Process: protein ubiquitination (GO:0016567);|Cellular Component: SCF ubiquitin ligase complex (GO:0019005);|Biological Process: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146); -- -- TRINITY_DN20413_c0_g2_i2 125.1675084 60.62342779 189.711589 3.129344478 1.645860479 3.28E-12 6.04E-11 Up 4.480267 7.391233 5.108498 14.76928 12.99429 15.08614 EYU44416.1 hypothetical protein MIMGU_mgv1a011890mg [Erythranthe guttata] Q9FH99|FB302_ARATH F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1 -- -- -- -- -- -- KOG1947 "Leucine rich repeat proteins, some proteins contain F-box" [R] POORLY CHARACTERIZED General function prediction only S ENOG4111IP9 LRR Biological Process: protein ubiquitination (GO:0016567);|Cellular Component: SCF ubiquitin ligase complex (GO:0019005);|Biological Process: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146); "PF12937.6,PF00646.32,PF13516.5" F-box-like|F-box domain|Leucine Rich repeat TRINITY_DN20416_c0_g2_i1 33.29008986 51.32410823 15.25607148 0.297249616 -1.750253147 0.00131354 0.006643511 Down 9.100427 10.25825 8.615809 1.334761 5.333024 2.98E-30 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2041_c0_g1_i1 14.05807717 21.39131405 6.724840292 0.314372473 -1.669453198 0.021368637 0.071448624 Down 5.418466 3.097783 3.738958 2.01688 0 1.000562 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20420_c0_g2_i1 6.000212035 12.00042407 0 0 #NAME? 0.000267832 0.001617577 Down 3.659519 2.157719 1.744361 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20423_c0_g2_i1 58.73598626 115.5430308 1.928941734 0.016694574 -5.904476868 1.02E-16 2.68E-15 Down 3.102921 5.82666 4.662845 0.000108241 3.97E-24 0.1700128 XP_011094554.1 DEAD-box ATP-dependent RNA helicase 38 isoform X1 [Sesamum indicum] Q93ZG7|RH38_ARATH DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana OX=3702 GN=RH38 PE=1 SV=2 sind:105174226 K18655 "DDX19, DBP5" ATP-dependent RNA helicase DDX19/DBP5 -- -- KOG0332 ATP-dependent RNA helicase [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification L ENOG410XRGX atp-dependent rna helicase Molecular Function: RNA binding (GO:0003723);|Molecular Function: RNA helicase activity (GO:0003724);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nuclear envelope (GO:0005635);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: RNA-dependent ATPase activity (GO:0008186);|Biological Process: response to heat (GO:0009408);|Biological Process: response to cold (GO:0009409);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: poly(A)+ mRNA export from nucleus (GO:0016973); "PF00270.28,PF00271.30" DEAD/DEAH box helicase|Helicase conserved C-terminal domain TRINITY_DN20424_c0_g1_i8 164.733355 94.93398967 234.5327204 2.470482081 1.304792592 2.87E-10 4.34E-09 Up 2.863072 2.871383 3.265772 6.013906 5.828716 6.142705 XP_011096132.1 trans-alpha-bergamotene synthase-like [Sesamum indicum] Q2XSC4|LABER_LAVAN Exo-alpha-bergamotene synthase OS=Lavandula angustifolia OX=39329 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YF98 synthase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: terpene synthase activity (GO:0010333); "PF03936.15,PF01397.20" "Terpene synthase family, metal binding domain|Terpene synthase, N-terminal domain" TRINITY_DN20425_c0_g1_i6 93.27915332 30.78528681 155.7730198 5.059982738 2.339132463 2.11E-10 3.25E-09 Up 3.124687 3.013789 2.575262 10.56269 9.652079 15.33893 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20430_c0_g1_i1 155.2962524 240.2262521 70.36625278 0.292916582 -1.771438226 6.50E-16 1.61E-14 Down 10.13165 9.508827 8.694333 2.388587 2.436435 1.856818 XP_011091849.1 aspartyl protease AED3 [Sesamum indicum] O04496|AED3_ARATH Aspartyl protease AED3 OS=Arabidopsis thaliana OX=3702 GN=AED3 PE=1 SV=1 -- -- -- -- -- -- KOG1339 Aspartyl protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XNV7 aspartic Molecular Function: nucleotide binding (GO:0000166);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Cellular Component: cell wall (GO:0005618);|Biological Process: proteolysis (GO:0006508);|Cellular Component: plant-type cell wall (GO:0009505);|Biological Process: systemic acquired resistance (GO:0009627);|Biological Process: protein catabolic process (GO:0030163);|Biological Process: regulation of programmed cell death (GO:0043067);|Cellular Component: apoplast (GO:0048046); "PF14543.5,PF14541.5,PF00026.22" Xylanase inhibitor N-terminal|Xylanase inhibitor C-terminal|Eukaryotic aspartyl protease TRINITY_DN20431_c0_g1_i1 27.13510465 49.14371921 5.126490101 0.104316283 -3.260963731 1.39E-08 1.72E-07 Down 2.819748 2.118293 2.947566 0.3047134 0.3065427 0.06835027 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20432_c0_g1_i3 30.0107706 19.16144424 40.86009696 2.132412173 1.092486323 0.020463445 0.069037321 Up 0.7383217 1.942802 1.174561 2.093572 2.240901 2.231319 PIN20564.1 "1,3-beta-glucan synthase [Handroanthus impetiginosus]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20442_c2_g1_i1 53.48299393 89.7229612 17.24302665 0.192180758 -2.379464204 0.000171798 0.001083264 Down 8.035425 7.455489 14.59597 1.835405 2.210042 0.4937541 XP_011083577.1 thaumatin-like protein 1b [Sesamum indicum] Q9FF29|PR5K_ARATH PR5-like receptor kinase OS=Arabidopsis thaliana OX=3702 GN=PR5K PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111GDH thaumatin-like protein Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to fungus (GO:0009620);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN20442_c2_g3_i1 14.19166872 7.636931295 20.74640615 2.71658934 1.441796494 0.044443977 0.12895145 Up 0.7440667 0.2382897 0.7821843 1.11605 1.659955 1.201432 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20442_c2_g4_i2 128.563593 256.7413976 0.385788347 0.001502634 -9.378290657 4.58E-77 8.85E-75 Down 16.73034 17.79098 17.08892 0 0 0.07351426 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20448_c0_g1_i1 280.8956323 384.9379845 176.8532801 0.459433174 -1.122073062 2.23E-12 4.16E-11 Down 79.45383 79.1795 89.37897 26.03675 36.99927 28.8668 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20448_c1_g1_i4 30.79159282 51.52229495 10.06089069 0.195272565 -2.356438823 2.52E-06 2.27E-05 Down 5.989927 3.490789 4.737477 1.035486 0.4090874 0.7860036 XP_019197725.1 PREDICTED: uncharacterized protein LOC109191553 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20448_c3_g4_i1 35.75187833 69.98415638 1.519600276 0.02171349 -5.525264565 6.88E-11 1.11E-09 Down 3.991361 8.272117 5.543102 0 0.09567519 0.2190981 XP_022854766.1 WD40 repeat-containing protein HOS15-like isoform X1 [Olea europaea var. sylvestris] Q9FN19|HOS15_ARATH WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana OX=3702 GN=HOS15 PE=2 SV=1 -- -- -- -- -- -- KOG0273 Beta-transducin family (WD-40 repeat) protein [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics S ENOG410XRSY f-box-like WD repeat-containing protein Cellular Component: histone deacetylase complex (GO:0000118);|Molecular Function: transcription corepressor activity (GO:0003714);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription by RNA polymerase II (GO:0006357);|Biological Process: response to cold (GO:0009409);|Biological Process: histone deacetylation (GO:0016575);|Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008); -- -- TRINITY_DN20449_c1_g2_i2 46.33298605 65.08469138 27.58128073 0.42377524 -1.238628796 0.001408918 0.007075455 Down 5.152884 4.938349 3.86226 1.962737 1.041185 1.781797 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20471_c2_g2_i1 36.91683407 50.31290828 23.52075986 0.46748957 -1.096993917 0.010655347 0.040082718 Down 3.863749 4.784765 3.662001 2.149738 0.7200212 1.777137 ABB13430.2 plasma membrane intrinsic protein [Olea europaea] Q9ATM4|PIP27_MAIZE Aquaporin PIP2-7 OS=Zea mays OX=4577 GN=PIP2-7 PE=2 SV=1 jcu:105628093 K09872 PIP aquaporin PIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Cellular Component: vacuole (GO:0005773);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to water deprivation (GO:0009414);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: water channel activity (GO:0015250);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN20474_c0_g2_i3 165.2620383 229.3309978 101.1930788 0.441253384 -1.180320753 1.33E-08 1.65E-07 Down 12.89372 10.40405 9.881058 3.812331 3.754239 4.257535 KQK16441.1 hypothetical protein BRADI_1g28760v3 [Brachypodium distachyon] Q9ATM7|PIP23_MAIZE Aquaporin PIP2-3 OS=Zea mays OX=4577 GN=PIP2-3 PE=2 SV=1 bdi:100844653 K09872 PIP aquaporin PIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Cellular Component: vacuole (GO:0005773);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to water deprivation (GO:0009414);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: water channel activity (GO:0015250);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN20480_c0_g2_i1 9.976631125 19.59102701 0.362235236 0.018489854 -5.757122332 0.000142157 0.000913236 Down 3.901411 1.292622 1.954537 0.03288306 0.06190972 9.21E-51 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20483_c0_g2_i1 14.70303123 7.410176826 21.99588564 2.968334785 1.569653816 0.033618429 0.103468181 Up 0.4017615 1.229664 1.839706 4.035895 1.354771 2.875918 XP_012855499.1 "PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250, partial [Erythranthe guttata]" C0LGS3|Y4372_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana OX=3702 GN=At4g37250 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T ENOG410YAQD LRR receptor-like serine threonine-protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN20485_c0_g1_i2 30.83522088 18.77910005 42.89134172 2.283993461 1.19155852 0.010119654 0.038420999 Up 1.646178 1.080593 1.186134 2.551988 1.80968 2.796819 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20485_c1_g1_i12 112.0512574 160.8343742 63.26814068 0.393374495 -1.346024674 5.68E-08 6.49E-07 Down 8.158214 9.52284 9.091658 3.408433 2.122519 2.938445 XP_022971412.1 EKC/KEOPS complex subunit bud32 isoform X2 [Cucurbita maxima] Q6CXB9|BUD32_KLULA EKC/KEOPS complex subunit BUD32 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=BUD32 PE=3 SV=1 pda:103723805 K08851 "TP53RK, PRPK, BUD32" TP53 regulating kinase and related kinases -- -- KOG3087 Serine/threonine protein kinase [R] POORLY CHARACTERIZED General function prediction only T COG3642 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (By similarity) "Cellular Component: chromosome, telomeric region (GO:0000781);|Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: tRNA processing (GO:0008033);|Molecular Function: hydrolase activity (GO:0016787);" -- -- TRINITY_DN20487_c0_g1_i1 9.309198106 18.61839621 0 0 #NAME? 1.99E-06 1.82E-05 Down 1.594985 2.045658 1.663086 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20487_c2_g1_i1 38.18236204 76.36472408 0 0 #NAME? 2.54E-24 1.07E-22 Down 6.29183 7.203415 4.98654 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20487_c2_g2_i1 27.54348988 55.08697976 0 0 #NAME? 1.23E-14 2.76E-13 Down 8.519903 4.233239 7.401589 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20487_c3_g2_i1 3.957491125 7.529193904 0.385788347 0.051238997 -4.286613944 0.020956849 0.070362002 Down 2.28935 0.6520533 0.8453683 3.49E-85 4.70E-34 0.2227856 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20487_c3_g4_i1 139.3978837 189.4609023 89.33486512 0.471521375 -1.084604923 0.009070904 0.035143951 Down 33.56602 20.38239 18.91901 7.823264 11.28015 8.640887 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20494_c0_g1_i16 3615.470013 5162.783691 2068.156335 0.400589383 -1.319803908 8.81E-84 1.89E-81 Down 76.98579 75.60295 78.07856 25.45246 24.72946 24.38128 XP_022004529.1 uncharacterized protein LOC110902100 [Helianthus annuus] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF13976.5,PF14223.5,PF07727.13" GAG-pre-integrase domain|gag-polypeptide of LTR copia-type|Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN20500_c1_g2_i2 164.8831954 240.1107206 89.65567011 0.373393032 -1.421233088 9.32E-12 1.66E-10 Down 25.58399 29.31545 22.8935 6.520297 6.646881 10.21223 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20504_c0_g1_i1 60.6198397 98.06448495 23.17519446 0.236326071 -2.0811493 8.18E-08 9.13E-07 Down 4.973024 4.469748 6.888964 1.322836 1.324267 0.4556935 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20504_c0_g4_i1 32.56520287 63.9730407 1.15736504 0.01809145 -5.788548181 1.42E-09 1.98E-08 Down 6.478483 10.82818 5.0716 1.97E-05 2.96E-72 0.3651937 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20504_c0_g5_i1 31.10724988 45.00186679 17.21263297 0.382487088 -1.38651705 0.011634076 0.0431741 Down 4.706539 9.253123 10.81457 0.965578 2.913157 3.779043 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20510_c0_g1_i6 63.99553502 39.65397214 88.33709791 2.227698592 1.155554049 0.000344652 0.002030208 Up 1.850051 1.145353 1.615752 2.326102 3.223654 2.776312 AKA27867.1 WRKY protein [Salvia miltiorrhiza] Q9C519|WRKY6_ARATH WRKY transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=WRKY6 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YDVM Transcription factor "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: response to chitin (GO:0010200);|Biological Process: cellular response to phosphate starvation (GO:0016036);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Biological Process: cellular response to boron-containing substance deprivation (GO:0080169);" PF03106.14 WRKY DNA -binding domain TRINITY_DN20512_c2_g2_i2 13.32187366 25.91927684 0.724470471 0.027951029 -5.160954769 4.09E-07 4.16E-06 Down 1.936212 3.730362 2.467875 0 0.1945578 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20512_c3_g1_i5 18.30820847 35.1463802 1.470036737 0.041826121 -4.579451996 1.09E-08 1.37E-07 Down 2.480107 3.258999 3.55032 0.2844617 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20513_c0_g1_i3 66.07073904 89.58917781 42.55230028 0.474971434 -1.074087346 0.000812863 0.004347626 Down 3.962229 2.924508 3.016938 1.058119 1.106858 1.596653 XP_011076679.1 protein ESKIMO 1 [Sesamum indicum] Q9LY46|TBL29_ARATH Protein ESKIMO 1 OS=Arabidopsis thaliana OX=3702 GN=ESK1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YA1R expressed protein "Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: Golgi apparatus (GO:0005794);|Biological Process: response to cold (GO:0009409);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: O-acetyltransferase activity (GO:0016413);|Biological Process: xylan biosynthetic process (GO:0045492);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: response to freezing (GO:0050826);|Molecular Function: xylan O-acetyltransferase activity (GO:1990538);" "PF13839.5,PF14416.5" GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p|PMR5 N terminal Domain TRINITY_DN20514_c1_g1_i8 175.837341 311.673663 40.00101904 0.128342635 -2.961927591 1.11E-20 3.79E-19 Down 11.27343 8.381421 9.413625 1.999854 0.3700576 0.6120822 XP_021642931.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Hevea brasiliensis] P08770|TRA1_MAIZE Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: transposition (GO:0032196);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN20514_c1_g2_i4 229.795134 396.6826665 62.90760142 0.158584195 -2.656679099 6.61E-23 2.56E-21 Down 34.17157 46.37744 38.55449 5.103095 7.381821 2.658359 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20518_c0_g2_i1 17.43677408 27.56309874 7.310449412 0.265225963 -1.914706086 0.018828929 0.064500911 Down 0.8913312 3.005778 2.847781 0.5902192 0.7643853 0.09447585 XP_011070390.1 protein GPR107 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG2569 G protein-coupled seven transmembrane receptor [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XQAQ Lung seven transmembrane receptor -- -- -- TRINITY_DN20529_c0_g2_i1 326.4443814 520.3577876 132.5309752 0.254692018 -1.973174346 4.22E-28 2.17E-26 Down 111.8443 91.15842 106.4086 26.53064 20.52348 16.33755 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2052_c0_g1_i1 7.870429296 15.74085859 0 0 #NAME? 1.75E-05 0.000136014 Down 3.045788 2.675767 1.921885 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20532_c0_g2_i4 19.3621567 27.4983264 11.225987 0.408242554 -1.292501523 0.037789757 0.113339309 Down 3.872488 4.863677 1.906613 1.18265 0.7961637 1.535411 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20536_c0_g1_i2 1207.033537 1728.419251 685.6478226 0.396690688 -1.333913561 2.44E-48 2.52E-46 Down 92.79303 92.11854 86.23052 28.04579 29.80191 28.97971 XP_011098856.1 "probable adenylate kinase 7, mitochondrial [Sesamum indicum]" Q8L7W7|KAD7_ARATH "Probable adenylate kinase 7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g01820 PE=2 SV=1" sind:105177411 K00939 "adk, AK" adenylate kinase ko00230 Purine metabolism KOG3078 Adenylate kinase [F] METABOLISM Nucleotide transport and metabolism F COG0563 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity) Molecular Function: adenylate kinase activity (GO:0004017);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739); "PF00406.21,PF13207.5" Adenylate kinase|AAA domain TRINITY_DN20542_c0_g2_i1 459.3275345 275.932846 642.722223 2.329270445 1.219878157 5.59E-10 8.19E-09 Up 44.48476 50.68002 54.33567 107.5974 92.87377 80.32533 PIN20213.1 Ribosomal protein S7 [Handroanthus impetiginosus] O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1 sind:105162467 K02989 "RP-S5e, RPS5" small subunit ribosomal protein S5e ko03010 Ribosome KOG3291 Ribosomal protein S7 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0049 "One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (By similarity)" Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: small ribosomal subunit (GO:0015935); -- -- TRINITY_DN20559_c0_g2_i4 366.2701621 173.3233907 559.2169336 3.226436613 1.689941682 6.16E-31 3.59E-29 Up 6.435665 5.771969 6.964006 16.33611 15.61916 18.02538 XP_020554265.1 berberine bridge enzyme-like 18 [Sesamum indicum] A6P6V9|CBDAS_CANSA Cannabidiolic acid synthase OS=Cannabis sativa OX=3483 GN=CBDAS PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: apoplast (GO:0048046);|Molecular Function: FAD binding (GO:0071949);|Molecular Function: cannabidiolate synthase activity (GO:0102779); "PF01565.22,PF08031.11" FAD binding domain|Berberine and berberine like TRINITY_DN20560_c2_g1_i3 21.96514292 13.30243262 30.62785323 2.302424986 1.203154153 0.032314931 0.100230383 Up 0.9021665 1.620569 1.272556 1.625681 2.375505 3.186751 PIN19840.1 Mitogen-activated protein kinase kinase (MAP2K) [Handroanthus impetiginosus] Q9S7U9|M2K2_ARATH Mitogen-activated protein kinase kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MKK2 PE=1 SV=2 sot:102593817 K20603 MKK2 mitogen-activated protein kinase kinase 2 -- -- KOG0581 Mitogen-activated protein kinase kinase (MAP2K) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XQ5A mitogen-activated protein kinase kinase "Biological Process: activation of MAPK activity (GO:0000187);|Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: MAP kinase kinase activity (GO:0004708);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to cold (GO:0009409);|Biological Process: cold acclimation (GO:0009631);|Biological Process: response to salt stress (GO:0009651);|Biological Process: defense response, incompatible interaction (GO:0009814);|Biological Process: xylem and phloem pattern formation (GO:0010051);|Biological Process: signal transduction by protein phosphorylation (GO:0023014);|Biological Process: stress-activated protein kinase signaling cascade (GO:0031098);|Biological Process: activation of protein kinase activity (GO:0032147);|Biological Process: auxin transport (GO:0060918);" -- -- TRINITY_DN20560_c2_g2_i1 31.78519216 59.38154999 4.188834327 0.070541007 -3.825394021 4.34E-09 5.73E-08 Down 3.421993 6.182593 6.800648 0.2432185 0 0.7238071 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20560_c2_g5_i1 8.873726569 16.63192037 1.115532767 0.067071796 -3.89814996 0.000420775 0.002424194 Down 1.54211 1.694334 1.404936 0.1018198 0.1010203 0.1093756 PIN04925.1 Very-long-chain 3-oxoacyl-CoA synthase [Handroanthus impetiginosus] Q9LZ72|KCS19_ARATH 3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana OX=3702 GN=KCS19 PE=2 SV=1 sind:105160568 K15397 KCS 3-ketoacyl-CoA synthase ko00062 Fatty acid elongation -- -- -- -- -- U ENOG4111B0J 3-ketoacyl-CoA synthase Biological Process: fatty acid biosynthetic process (GO:0006633);|Biological Process: response to cold (GO:0009409);|Biological Process: response to light stimulus (GO:0009416);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: 3-oxo-arachidoyl-CoA synthase activity (GO:0102336);|Molecular Function: 3-oxo-cerotoyl-CoA synthase activity (GO:0102337);|Molecular Function: 3-oxo-lignoceronyl-CoA synthase activity (GO:0102338);|Molecular Function: very-long-chain 3-ketoacyl-CoA synthase activity (GO:0102756); -- -- TRINITY_DN20560_c4_g1_i1 7.702421376 15.40484275 0 0 #NAME? 0.000323171 0.001914103 Down 4.019885 1.062183 1.967095 2.83E-82 7.62E-72 2.95E-81 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20562_c0_g1_i2 335.3482924 194.4605912 476.2359936 2.449010315 1.29219885 2.51E-18 7.39E-17 Up 8.193628 8.840502 7.723107 14.86794 16.19604 17.89854 XP_012854857.1 "PREDICTED: protein kinase 2B, chloroplastic-like [Erythranthe guttata]" O49840|PBL3_ARATH Probable serine/threonine-protein kinase PBL3 OS=Arabidopsis thaliana OX=3702 GN=PBL3 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN20578_c0_g1_i1 92.23893683 125.3391745 59.13869916 0.471829333 -1.083662982 4.95E-05 0.000350728 Down 4.105562 3.685394 4.704956 1.375868 1.641994 1.734432 XP_011076024.1 CDP-diacylglycerol--serine O-phosphatidyltransferase 1 [Sesamum indicum] Q0JR55|PSS1_ORYSJ CDP-diacylglycerol--serine O-phosphatidyltransferase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PSS1 PE=2 SV=2 sind:105160377 K08730 PTDSS2 phosphatidylserine synthase 2 ko00564 Glycerophospholipid metabolism KOG2735 Phosphatidylserine synthase [I] METABOLISM Lipid transport and metabolism I ENOG410XS7H Phosphatidylserine synthase Molecular Function: CDP-diacylglycerol-serine O-phosphatidyltransferase activity (GO:0003882);|Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: phosphatidylethanolamine biosynthetic process (GO:0006646);|Biological Process: phosphatidylserine biosynthetic process (GO:0006659);|Cellular Component: integral component of membrane (GO:0016021); PF03034.14 Phosphatidyl serine synthase TRINITY_DN20579_c0_g1_i1 22.99195764 44.86310857 1.120806715 0.024982814 -5.322920178 0.032087808 0.099635929 Down 19.12666 0.00090934 7.134653 0.3542188 0.01258952 0.1198535 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20583_c0_g2_i2 129.974779 179.0398271 80.90973093 0.451909121 -1.145895419 2.45E-05 0.00018408 Down 8.574631 11.21301 10.32366 2.669807 5.356725 2.947468 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20587_c0_g8_i1 13.24181383 24.27857255 2.205055106 0.090823095 -3.460796986 0.000328684 0.001944725 Down 7.333826 4.757953 2.613231 1.024564 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20598_c1_g1_i1 16.89557782 32.3422147 1.448940942 0.044800301 -4.480347776 6.56E-08 7.42E-07 Down 3.245981 3.899186 4.298632 1.11E-19 0.4566973 8.68E-55 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20598_c3_g4_i1 22.25311548 35.17226805 9.333962908 0.265378476 -1.913876729 0.020325686 0.068668917 Down 3.850143 9.883889 5.09185 2.727609 0 1.375923 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20599_c0_g3_i1 135.5384292 268.8457928 2.231065533 0.008298681 -6.912902194 6.96E-74 1.28E-71 Down 3.86577 3.457395 3.504802 0.01836742 0.0272391 0.01999012 XP_020092846.1 uncharacterized protein LOC109713256 [Ananas comosus] P0CT40|TF29_SCHPO Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-9 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF08284.10,PF13650.5,PF13975.5,PF00078.26,PF00665.25,PF03732.16,PF09337.9" Retroviral aspartyl protease|Aspartyl protease|gag-polyprotein putative aspartyl protease|Reverse transcriptase (RNA-dependent DNA polymerase)|Integrase core domain|Retrotransposon gag protein|His(2)-Cys(2) zinc finger TRINITY_DN205_c0_g1_i1 4.983591087 9.967182175 0 0 #NAME? 0.001075884 0.005571888 Down 1.275009 1.215024 1.101041 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20601_c0_g1_i11 123.3278255 240.2593042 6.396346749 0.026622681 -5.231200341 9.46E-57 1.23E-54 Down 12.45034 14.62816 13.456 0.250932 0.12424 0.4792283 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20605_c0_g1_i2 64.56776108 86.20516481 42.93035736 0.498002149 -1.005776126 0.001688203 0.008293574 Down 6.59387 6.901929 6.641373 2.486631 2.207174 3.36251 XP_011094546.1 protein ROS1-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20605_c0_g2_i1 61.68809806 103.1946626 20.18153351 0.19556761 -2.354260646 1.58E-11 2.75E-10 Down 2.749538 3.168312 3.678992 0.413901 0.4339327 0.68919 XP_011094546.1 protein ROS1-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG0177 endonuclease III -- -- -- TRINITY_DN20605_c0_g3_i1 17.52089494 29.87874146 5.163048426 0.172800064 -2.532824346 0.00018348 0.001150213 Down 4.904037 3.353986 4.904279 0.5697165 0.9451478 0.4205932 PIN10260.1 Uracil-DNA glycosylase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG0177 endonuclease III -- -- -- TRINITY_DN20606_c0_g1_i1 74.0395445 36.67558092 111.4035081 3.037539019 1.602902941 1.59E-07 1.70E-06 Up 1.64162 1.336513 1.606794 3.137093 4.269898 3.814929 XP_011096142.1 E3 ubiquitin-protein ligase RGLG2-like [Sesamum indicum] Q9SS90|RGLG1_ARATH E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana OX=3702 GN=RGLG1 PE=1 SV=1 sind:105175403 K16280 RGLG E3 ubiquitin-protein ligase RGLG -- -- KOG1327 Copine [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XPC8 copine family Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: nucleus (GO:0005634);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: protein K63-linked ubiquitination (GO:0070534);|Biological Process: negative regulation of response to water deprivation (GO:0080148); "PF07002.15,PF13920.5" "Copine|Zinc finger, C3HC4 type (RING finger)" TRINITY_DN20618_c2_g1_i1 10.52760664 4.817685109 16.23752818 3.370400474 1.752920024 0.037655038 0.113002454 Up 0.3063498 0.5900519 0.5688333 1.804066 1.311402 0.7188211 PIN05426.1 Non-specific serine/threonine protein kinase [Handroanthus impetiginosus] Q9SA25|WAKLG_ARATH Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana OX=3702 GN=WAKL8 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- PF07645.14 Calcium-binding EGF domain TRINITY_DN20618_c2_g2_i2 20.14321311 7.886053126 32.40037309 4.108566423 2.038635091 0.000665123 0.003636703 Up 0.322114 1.233728 0.6037716 2.833795 1.867316 2.698348 PIN06199.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q7X8C5|WAKLB_ARATH Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana OX=3702 GN=WAKL2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- PF13947.5 Wall-associated receptor kinase galacturonan-binding TRINITY_DN20621_c0_g2_i1 28.52825038 57.05650077 0 0 #NAME? 2.44E-11 4.15E-10 Down 7.140595 9.952697 4.2281 0 0 2.12E-102 KZV16148.1 "glucan endo-1,3-beta-glucosidase 1-like [Dorcoceras hygrometricum]" O65399|E131_ARATH "Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3" sind:105175335 K19891 GN1_2_3 "glucan endo-1,3-beta-glucosidase 1/2/3" ko00500 Starch and sucrose metabolism -- -- -- -- -- G ENOG410YEGG glucan endo-1-3-beta-glucosidase "Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: defense response (GO:0006952);|Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);|Cellular Component: anchored component of plasma membrane (GO:0046658);" -- -- TRINITY_DN20625_c0_g1_i4 236.820907 368.0889072 105.5529068 0.286759271 -1.802087963 1.32E-23 5.36E-22 Down 20.15431 18.60298 17.29126 3.960514 4.498112 4.520609 PIN10432.1 "Ras-related small GTPase, Rho type [Handroanthus impetiginosus]" Q41254|RAC9_GOSHI Rac-like GTP-binding protein RAC9 OS=Gossypium hirsutum OX=3635 GN=RAC9 PE=2 SV=1 sind:105175592 K04392 RAC1 Ras-related C3 botulinum toxin substrate 1 ko04145|ko04933 Phagosome|AGE-RAGE signaling pathway in diabetic complications KOG0393 "Ras-related small GTPase, Rho type" [R] POORLY CHARACTERIZED General function prediction only S COG1100 GTP-binding Protein Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: small GTPase mediated signal transduction (GO:0007264);|Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);|Cellular Component: membrane (GO:0016020); "PF00071.21,PF08477.12" "Ras family|Ras of Complex, Roc, domain of DAPkinase" TRINITY_DN20634_c0_g1_i1 162.9749674 224.4145092 101.5354255 0.452445904 -1.144182785 2.82E-08 3.36E-07 Down 6.691524 8.098087 7.901187 2.646767 3.179388 2.461005 XP_011099089.1 "proline dehydrogenase 2, mitochondrial isoform X1 [Sesamum indicum]" Q6NKX1|PROD2_ARATH "Proline dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=POX2 PE=2 SV=1" sind:105177580 K00318 PRODH proline dehydrogenase ko00330 Arginine and proline metabolism KOG0186 Proline oxidase [E] METABOLISM Amino acid transport and metabolism E COG0506 Proline dehydrogenase Molecular Function: proline dehydrogenase activity (GO:0004657);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: proline catabolic process (GO:0006562);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: proline catabolic process to glutamate (GO:0010133);|Molecular Function: FAD binding (GO:0071949); PF01619.17 Proline dehydrogenase TRINITY_DN2063_c0_g1_i1 18.59023134 37.18046267 0 0 #NAME? 4.10E-12 7.50E-11 Down 6.386098 6.687677 3.506175 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20641_c0_g1_i1 17.34370979 27.44271487 7.24470471 0.263993732 -1.92142442 0.02252566 0.074646466 Down 4.652268 3.125681 2.484923 0 2.116297 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20643_c1_g2_i3 244.3365468 440.1005776 48.57251588 0.110366853 -3.179621146 1.54E-59 2.15E-57 Down 14.02553 12.91695 12.08481 1.467536 1.040984 0.986472 XP_011096945.1 thaumatin-like protein 1 [Sesamum indicum] A0A1P8B554|THLP1_ARATH Thaumatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=TLP1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YD5Y thaumatin-like protein Biological Process: defense response (GO:0006952);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to ethylene (GO:0009723); -- -- TRINITY_DN20659_c0_g3_i6 21.42982081 42.13517115 0.724470471 0.017193961 -5.861954288 6.59E-12 1.19E-10 Down 2.318985 3.757908 3.512341 0 0.1291905 0 -- -- Q39230|SYSC_ARATH "Serine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At5g27470 PE=2 SV=1" -- -- -- -- -- -- KOG2509 Seryl-tRNA synthetase [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " -- -- -- Molecular Function: serine-tRNA ligase activity (GO:0004828);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: seryl-tRNA aminoacylation (GO:0006434);|Biological Process: response to cadmium ion (GO:0046686);|Biological Process: selenocysteinyl-tRNA(Sec) biosynthetic process (GO:0097056); -- -- TRINITY_DN20659_c0_g4_i1 18.96648855 37.93297711 0 0 #NAME? 7.73E-05 0.00052547 Down 10.75705 4.907751 2.418133 0 0 5.38E-32 PHT47209.1 "Peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic [Capsicum baccatum]" -- -- sot:102581487 K03768 "PPIB, ppiB" peptidyl-prolyl cis-trans isomerase B (cyclophilin B) -- -- -- -- -- -- -- O COG0652 peptidyl-prolyl cis-trans isomerase activity -- -- -- TRINITY_DN20659_c0_g5_i1 20.58120899 41.16241798 0 0 #NAME? 0.001744728 0.008537997 Down 0.5516817 5.356403 11.02806 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20659_c0_g6_i1 12.45715605 24.9143121 0 0 #NAME? 3.55E-08 4.18E-07 Down 7.014476 3.006625 4.533846 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20659_c0_g7_i1 16.6536409 28.43335197 4.87392984 0.171415943 -2.544426797 0.000745511 0.004020553 Down 5.450731 3.559147 8.575502 0 1.110418 1.333588 CDO98484.1 unnamed protein product [Coffea canephora] -- -- gmx:100796313 K03768 "PPIB, ppiB" peptidyl-prolyl cis-trans isomerase B (cyclophilin B) -- -- -- -- -- -- -- O COG0652 peptidyl-prolyl cis-trans isomerase activity -- -- -- TRINITY_DN20660_c0_g1_i2 81.78670322 45.44313213 118.1302743 2.599518757 1.378244565 9.14E-07 8.83E-06 Up 4.997327 3.867126 3.013538 9.053581 8.944304 6.798017 XP_011071942.1 uncharacterized protein LOC105157271 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00564.23 PB1 domain TRINITY_DN20665_c1_g5_i1 9.815794304 16.61839848 3.013190124 0.181316517 -2.463417745 0.007150439 0.028762063 Down 2.695259 3.195258 2.532472 0.5359144 0 0.5602373 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20665_c1_g7_i1 21.47276966 42.94553931 0 0 #NAME? 4.18E-14 8.98E-13 Down 3.229207 4.770311 4.288688 0 0 0 KZV31634.1 monooxygenase [Dorcoceras hygrometricum] Q9SVQ1|YUC2_ARATH Indole-3-pyruvate monooxygenase YUCCA2 OS=Arabidopsis thaliana OX=3702 GN=YUC2 PE=1 SV=1 sind:105170279 K11816 YUCCA indole-3-pyruvate monooxygenase ko00380 Tryptophan metabolism KOG1399 Flavin-containing monooxygenase [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " P COG2072 Monooxygenase "Molecular Function: N,N-dimethylaniline monooxygenase activity (GO:0004499);|Biological Process: auxin biosynthetic process (GO:0009851);|Molecular Function: flavin adenine dinucleotide binding (GO:0050660);|Molecular Function: NADP binding (GO:0050661);|Molecular Function: indole-3-pyruvate monooxygenase activity (GO:0103075);" -- -- TRINITY_DN20666_c0_g4_i1 12.56793525 20.3561531 4.779717395 0.234804551 -2.090467722 0.009465293 0.036414785 Down 3.711696 5.965106 2.426919 0.07106572 1.667661 0.6052189 PIN23704.1 hypothetical protein CDL12_03568 [Handroanthus impetiginosus] Q9C9F4|COLX_ARATH Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana OX=3702 GN=At1g68190 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111DUW zinc finger "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: zinc ion binding (GO:0008270);" -- -- TRINITY_DN20666_c1_g2_i3 531.0210111 985.1771197 76.86490255 0.078021404 -3.679986221 7.80E-143 3.19E-140 Down 51.1889 55.95365 54.08407 3.872403 3.075374 3.218691 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20666_c1_g3_i1 26.2645483 50.21436652 2.31473008 0.046096969 -4.439184307 5.20E-06 4.43E-05 Down 4.916733 2.237047 6.445437 7.15E-72 1.18E-74 0.5551015 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20668_c0_g1_i1 7083.09612 4600.65705 9565.53519 2.07916719 1.056005773 1.29E-67 2.10E-65 Up 199.594 204.8899 200.6122 343.997 335.7634 335.3131 XP_012848890.1 PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase-like [Erythranthe guttata] Q08507|ACCO3_PETHY 1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida OX=4102 GN=ACO3 PE=3 SV=1 sind:105175306 K05933 E1.14.17.4 aminocyclopropanecarboxylate oxidase ko00270 Cysteine and methionine metabolism KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: ethylene biosynthetic process (GO:0009693);|Molecular Function: 1-aminocyclopropane-1-carboxylate oxidase activity (GO:0009815);|Molecular Function: L-ascorbic acid binding (GO:0031418);|Molecular Function: metal ion binding (GO:0046872); "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN20669_c0_g1_i7 93.66131334 153.1792794 34.14334725 0.222897949 -2.165544752 2.21E-14 4.84E-13 Down 4.239625 5.106353 4.847235 0.8121554 0.9230897 0.8077998 GAU42921.1 hypothetical protein TSUD_283440 [Trifolium subterraneum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20674_c1_g1_i2 57.80775037 82.71036645 32.90513429 0.397835673 -1.32975545 0.000104577 0.00069074 Down 2.462468 1.85961 2.610032 0.9228268 0.7869113 0.5321694 XP_017407717.1 PREDICTED: uncharacterized protein LOC108320713 [Vigna angularis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20677_c0_g1_i2 47.29879409 24.621507 69.97608118 2.842071412 1.506942805 7.50E-05 0.00051087 Up 3.083677 1.972964 2.681672 4.742871 6.142079 6.714064 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20686_c0_g1_i3 113.4765652 169.9289386 57.02419188 0.335576697 -1.57528556 6.13E-10 8.94E-09 Down 6.373738 7.786989 8.233384 1.647012 1.392102 3.105235 XP_016494115.1 "PREDICTED: nudix hydrolase 23, chloroplastic-like isoform X3 [Nicotiana tabacum]" P93740|NUD23_ARATH "Nudix hydrolase 23, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT23 PE=1 SV=2" mdm:103411488 K18453 NUDT23 ADP-ribose/FAD diphosphatase ko00230|ko00740 Purine metabolism|Riboflavin metabolism KOG3084 NADH pyrophosphatase I of the Nudix family of hydrolases [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " F COG1051 NUDiX hydrolase Biological Process: response to light stimulus (GO:0009416);|Cellular Component: chloroplast (GO:0009507);|Biological Process: flavin-containing compound metabolic process (GO:0042726);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: ADP-ribose diphosphatase activity (GO:0047631);|Molecular Function: FAD diphosphatase activity (GO:0047884); -- -- TRINITY_DN20691_c0_g1_i5 73.59445861 110.3925171 36.79640013 0.333323318 -1.585005847 1.52E-05 0.00011927 Down 14.52734 9.06658 14.85046 2.122026 4.385604 3.871766 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20691_c0_g3_i1 27.30897621 54.61795243 0 0 #NAME? 6.99E-18 2.00E-16 Down 4.953499 7.432844 8.837617 8.37E-58 5.69E-90 0 EYU22302.1 hypothetical protein MIMGU_mgv1a013790mg [Erythranthe guttata] Q9LMU2|KTI2_ARATH Kunitz trypsin inhibitor 2 OS=Arabidopsis thaliana OX=3702 GN=KTI2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: endopeptidase inhibitor activity (GO:0004866);|Cellular Component: cell wall (GO:0005618);|Cellular Component: apoplast (GO:0048046); -- -- TRINITY_DN20691_c0_g4_i1 16.81754863 33.63509726 0 0 #NAME? 5.14E-10 7.56E-09 Down 7.453807 4.800272 3.476907 3.14E-18 2.27E-22 5.05E-31 XP_011094913.1 aldo-keto reductase family 4 member C9 [Sesamum indicum] Q84TF0|AKRCA_ARATH Aldo-keto reductase family 4 member C10 OS=Arabidopsis thaliana OX=3702 GN=AKR4C10 PE=1 SV=1 -- -- -- -- -- -- KOG1577 Aldo/keto reductase family proteins [R] POORLY CHARACTERIZED General function prediction only S COG0656 reductase Molecular Function: alditol:NADP+ 1-oxidoreductase activity (GO:0004032);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Molecular Function: alcohol dehydrogenase (NADP+) activity (GO:0008106);|Molecular Function: oxidoreductase activity (GO:0016491); -- -- TRINITY_DN20692_c0_g3_i1 24.88615892 49.00074114 0.771576693 0.015746225 -5.988850195 5.45E-14 1.16E-12 Down 5.410562 8.964303 9.122134 0 0 0.3761479 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20699_c0_g1_i7 190.0428615 298.2010165 81.88470637 0.274595665 -1.864619246 4.76E-21 1.68E-19 Down 12.4179 12.4543 13.42911 2.396348 2.930375 3.225733 XP_021642931.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Hevea brasiliensis] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); PF14372.5 Domain of unknown function (DUF4413) TRINITY_DN20702_c0_g1_i2 1085.313575 90.14911103 2080.478038 23.07818695 4.528457984 0 0 Up 4.298537 4.638801 5.217462 85.72722 92.11175 85.8907 PIN07032.1 Peroxidase [Handroanthus impetiginosus] P22196|PER2_ARAHY Cationic peroxidase 2 OS=Arachis hypogaea OX=3818 GN=PNC2 PE=2 SV=1 sind:105169211 K00430 E1.11.1.7 peroxidase ko00940 Phenylpropanoid biosynthesis -- -- -- -- -- I ENOG4111ADF Cationic peroxidase Molecular Function: peroxidase activity (GO:0004601);|Cellular Component: extracellular region (GO:0005576);|Biological Process: response to oxidative stress (GO:0006979);|Molecular Function: heme binding (GO:0020037);|Biological Process: hydrogen peroxide catabolic process (GO:0042744);|Molecular Function: metal ion binding (GO:0046872); PF00141.22 Peroxidase TRINITY_DN20716_c2_g5_i1 7.043657904 14.08731581 0 0 #NAME? 5.49E-05 0.000385604 Down 3.299607 2.667227 2.529432 0 0 0 XP_011095279.2 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Sesamum indicum] O81833|SD11_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana OX=3702 GN=SD11 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20718_c0_g2_i1 13.46154573 6.916977635 20.00611383 2.892320156 1.532227256 0.029371858 0.092626356 Up 0.975902 0.6345828 0.4156674 1.158611 2.191188 1.522762 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20719_c0_g3_i2 74.26844665 45.461979 103.0749143 2.267277329 1.180960869 7.86E-05 0.000533872 Up 2.042927 2.926411 2.201942 4.153998 4.130184 4.767147 EYU33571.1 hypothetical protein MIMGU_mgv1a020014mg [Erythranthe guttata] O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF08276.10,PF07714.16,PF00069.24" PAN-like domain|Protein tyrosine kinase|Protein kinase domain TRINITY_DN20720_c1_g1_i4 161.3655154 75.7835446 246.9474862 3.25858981 1.704247757 1.01E-14 2.30E-13 Up 19.63064 11.8688 9.273665 31.25223 39.56725 36.16189 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20723_c0_g1_i3 41.20418195 61.52872967 20.87963423 0.339347722 -1.559163768 0.000110662 0.000726855 Down 1.77145 2.643427 3.055307 0.3637752 0.818194 0.8676021 PIN15057.1 hypothetical protein CDL12_12320 [Handroanthus impetiginosus] Q6DBP8|GAT11_ARATH GATA transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=GATA11 PE=2 SV=1 -- -- -- -- -- -- KOG1601 GATA-4/5/6 transcription factors [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5641 Transcription factor Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Molecular Function: zinc ion binding (GO:0008270);|Molecular Function: sequence-specific DNA binding (GO:0043565); -- -- TRINITY_DN20729_c0_g1_i1 1346.021991 483.9516645 2208.092317 4.562629863 2.189865622 5.57E-129 1.97E-126 Up 29.56605 30.32964 30.55549 111.4555 111.3624 110.0684 XP_011075272.1 "beta-D-glucosyl crocetin beta-1,6-glucosyltransferase-like [Sesamum indicum]" F8WKW8|UGT9_GARJA "Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase OS=Gardenia jasminoides OX=114476 GN=UGT94E5 PE=1 SV=1" -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase "Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);" -- -- TRINITY_DN20729_c0_g3_i1 1446.74044 384.3214062 2509.159475 6.528804886 2.706818927 9.48E-195 6.83E-192 Up 16.6587 16.05201 14.78911 86.34119 81.94596 81.86305 XP_011075272.1 "beta-D-glucosyl crocetin beta-1,6-glucosyltransferase-like [Sesamum indicum]" F8WKW8|UGT9_GARJA "Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase OS=Gardenia jasminoides OX=114476 GN=UGT94E5 PE=1 SV=1" -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase "Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);" PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN20730_c0_g1_i1 54.38419659 19.91772485 88.85066833 4.460884412 2.157329766 2.58E-09 3.50E-08 Up 0.4632826 1.355244 0.6731186 3.479164 3.06384 2.346894 XP_011086131.1 sugar carrier protein C [Sesamum indicum] Q41144|STC_RICCO Sugar carrier protein C OS=Ricinus communis OX=3988 GN=STC PE=2 SV=1 -- -- -- -- -- -- KOG0254 Predicted transporter (major facilitator superfamily) [R] POORLY CHARACTERIZED General function prediction only G ENOG410XNQK Transporter Biological Process: carbohydrate transport (GO:0008643);|Molecular Function: symporter activity (GO:0015293);|Cellular Component: integral component of membrane (GO:0016021); "PF00083.23,PF07690.15" Sugar (and other) transporter|Major Facilitator Superfamily TRINITY_DN20734_c0_g3_i1 10.10163832 16.85667833 3.3465983 0.198532489 -2.33255298 0.008695758 0.03392179 Down 1.162528 4.079019 2.952197 0.389524 0.3852187 0.3919895 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20739_c0_g1_i2 6.274126373 11.39088771 1.15736504 0.101604464 -3.298964306 0.007888319 0.031237111 Down 2.185939 1.696675 2.65777 0 0 0.5000257 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20741_c1_g1_i1 121.2352051 228.002226 14.46818427 0.063456329 -3.978092126 3.39E-42 2.90E-40 Down 36.50018 28.7896 31.34275 2.462067 1.08953 1.340614 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20741_c3_g1_i2 20.42666751 30.11789672 10.73543831 0.356447145 -1.488239928 0.044497978 0.129043072 Down 3.54371 1.212407 1.995535 0.5546266 0.8157381 0.5406403 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20741_c4_g1_i1 346.747667 575.3943754 118.1009586 0.205252195 -2.284530444 1.17E-43 1.06E-41 Down 11.08762 10.46934 9.046089 2.059308 1.424264 1.58366 XP_024038296.1 PKS-NRPS hybrid synthetase CHGG_01239-like [Citrus clementina] Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111K1M transposon protein "Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: zinc ion binding (GO:0008270);" PF10551.8 MULE transposase domain TRINITY_DN20741_c5_g1_i1 39.87084292 57.02132974 22.72035611 0.398453635 -1.327516236 0.001453373 0.007268147 Down 3.967912 3.088854 3.151247 1.548226 0.6525219 1.138593 PIM98950.1 hypothetical protein CDL12_28560 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- -- -- TRINITY_DN20741_c6_g1_i12 129.1775265 227.8247603 30.53029278 0.134007791 -2.89961122 1.28E-29 7.08E-28 Down 9.827169 8.455141 10.81789 1.478258 1.236028 0.4605059 PIN10074.1 "Ferric reductase, NADH/NADPH oxidase [Handroanthus impetiginosus]" Q9LZU9|RBOHJ_ARATH Putative respiratory burst oxidase homolog protein J OS=Arabidopsis thaliana OX=3702 GN=RBOHJ PE=3 SV=2 -- -- -- -- -- -- KOG0039 "Ferric reductase, NADH/NADPH oxidase and related proteins" [PQ] METABOLISM|METABOLISM "Inorganic ion transport and metabolism |Secondary metabolites biosynthesis, transport and catabolism " U ENOG410XNZY NADPH Oxidase "Molecular Function: peroxidase activity (GO:0004601);|Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor (GO:0050664);" -- -- TRINITY_DN20741_c6_g3_i1 374.9155104 652.6285648 97.20245591 0.148939935 -2.747197463 7.76E-34 5.05E-32 Down 111.1631 115.4349 88.43478 11.52008 16.48312 9.820713 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20744_c0_g1_i1 315.6158753 602.7159901 28.51576056 0.047312102 -4.401646923 6.38E-107 1.75E-104 Down 22.02528 20.82687 24.7786 0.6622465 1.129928 0.780589 XP_011094434.1 cytochrome P450 76A1-like [Sesamum indicum] P37122|C76A2_SOLME Cytochrome P450 76A2 OS=Solanum melongena OX=4111 GN=CYP76A2 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN20749_c0_g1_i3 2544.697054 1604.431619 3484.962489 2.172085396 1.119080824 1.73E-53 2.10E-51 Up 83.06459 86.69258 81.34659 144.4879 147.2693 148.3279 XP_011086840.1 "photosynthetic NDH subunit of lumenal location 5, chloroplastic [Sesamum indicum]" Q9ASS6|PNSL5_ARATH "Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL5 PE=1 SV=1" sind:105168448 K03768 "PPIB, ppiB" peptidyl-prolyl cis-trans isomerase B (cyclophilin B) -- -- KOG0880 Peptidyl-prolyl cis-trans isomerase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410Z0G4 PPIases accelerate the folding of proteins (By similarity) Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);|Biological Process: protein folding (GO:0006457);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stromal thylakoid (GO:0009533);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: chloroplast thylakoid lumen (GO:0009543);|Cellular Component: thylakoid (GO:0009579);|Biological Process: NAD(P)H dehydrogenase complex assembly (GO:0010275);|Cellular Component: thylakoid lumen (GO:0031977);|Molecular Function: protein histidine kinase binding (GO:0043424);|Molecular Function: unfolded protein binding (GO:0051082); PF00160.20 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TRINITY_DN20764_c0_g1_i2 27.55623384 46.30842842 8.804039261 0.190117427 -2.395037313 0.017268961 0.059893792 Down 3.669113 2.449162 0.8287901 0.5351628 0.4251644 0.1070017 XP_012835283.1 "PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Erythranthe guttata]" Q8W496|PTC52_ARATH "Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- P COG4638 rieske 2fe-2S domain-containing protein "Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid (GO:0009536);|Cellular Component: chloroplast inner membrane (GO:0009706);|Cellular Component: chloroplast envelope (GO:0009941);|Molecular Function: chlorophyllide a oxygenase [overall] activity (GO:0010277);|Biological Process: protein transport (GO:0015031);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);" -- -- TRINITY_DN20764_c0_g2_i3 100.4828507 193.860706 7.104995373 0.036650003 -4.77004289 1.83E-19 5.81E-18 Down 4.085085 6.212489 4.03334 0.0442725 0.17423 0.2174176 XP_012835283.1 "PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Erythranthe guttata]" Q8W496|PTC52_ARATH "Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410XP4Q NA "Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid (GO:0009536);|Cellular Component: chloroplast inner membrane (GO:0009706);|Cellular Component: chloroplast envelope (GO:0009941);|Molecular Function: chlorophyllide a oxygenase [overall] activity (GO:0010277);|Biological Process: protein transport (GO:0015031);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);" -- -- TRINITY_DN20764_c1_g1_i10 104.0675895 207.3636024 0.771576693 0.003720888 -8.070137406 5.52E-61 7.98E-59 Down 7.45749 8.894977 7.6464 0 0 0.07840137 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20768_c0_g1_i5 195.9915754 128.2550356 263.7281153 2.056278836 1.040035911 3.99E-06 3.46E-05 Up 7.276903 5.885842 7.187691 8.774919 12.41528 12.56632 XP_011071094.1 "1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal [Sesamum indicum]" Q8GYN9|MENB_ARATH "1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=MENB PE=1 SV=2" sind:105156613 K01661 menB naphthoate synthase ko00130 Ubiquinone and other terpenoid-quinone biosynthesis KOG1680 Enoyl-CoA hydratase [I] METABOLISM Lipid transport and metabolism H COG0447 Naphthoate synthase "Cellular Component: peroxisome (GO:0005777);|Cellular Component: cytosol (GO:0005829);|Molecular Function: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity (GO:0008935);|Biological Process: menaquinone biosynthetic process (GO:0009234);|Molecular Function: isomerase activity (GO:0016853);|Biological Process: phylloquinone biosynthetic process (GO:0042372);" "PF00378.19,PF16113.4" Enoyl-CoA hydratase/isomerase|Enoyl-CoA hydratase/isomerase TRINITY_DN20769_c2_g8_i1 14.81733205 29.6346641 0 0 #NAME? 8.04E-10 1.15E-08 Down 5.872344 5.480788 3.99075 1.40E-32 9.65E-20 2.75E-15 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20774_c0_g1_i10 52.48661604 78.39132788 26.58190419 0.339092409 -1.560249608 2.41E-05 0.000181488 Down 2.543736 3.564198 2.553157 0.8990183 0.9443855 0.5235383 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20774_c0_g2_i1 27.49650172 17.04906753 37.94393591 2.225572503 1.154176501 0.018049946 0.062198527 Up 1.309047 2.029637 1.289326 2.946032 2.430647 2.977659 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20788_c0_g4_i2 20.21733927 9.278510997 31.15616755 3.357884423 1.747552574 0.003052296 0.013871934 Up 0.6591517 0.09174936 0.459766 0.8445526 1.345104 1.08192 AAS77402.1 quercetin 3-O-glucoside-6''-O-malonyltransferase [Glandularia x hybrida] Q8W1W9|5MAT1_SALSN Malonyl-coenzyme:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase OS=Salvia splendens OX=180675 GN=5MAT1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZBAM Anthocyanin 5-aromatic Biological Process: phenylpropanoid metabolic process (GO:0009698);|Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);|Molecular Function: anthocyanin 5-O-glucoside 6'''-O-malonyltransferase activity (GO:0033810); PF02458.14 Transferase family TRINITY_DN20797_c0_g6_i1 8.829041813 15.05950891 2.598574717 0.172553749 -2.534882277 0.009617208 0.036874224 Down 1.916556 0.7752954 1.507808 0.271759 0.148935 0.1620127 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20809_c0_g1_i2 28.7739 53.08566892 4.462131066 0.084055286 -3.572517646 6.59E-07 6.50E-06 Down 6.302841 9.809249 14.0955 0.6973624 0.7008354 0.74024 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20824_c0_g1_i1 27.80348536 8.174216636 47.43275408 5.802727795 2.536731254 0.010072029 0.038265785 Up 1.218535 0.5140184 0.8755673 2.532804 2.72268 7.089431 XP_012857590.1 PREDICTED: NAC domain-containing protein 2-like isoform X2 [Erythranthe guttata] Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=NAC002 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YE96 Nac domain-containing protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to wounding (GO:0009611);|Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);|Molecular Function: kinase binding (GO:0019900); -- -- TRINITY_DN20826_c0_g2_i1 19.31721325 11.42101426 27.21341223 2.382749168 1.252627087 0.034457947 0.105500444 Up 1.276422 2.750201 1.555704 2.954231 3.379917 4.365232 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20826_c4_g1_i8 260.0146828 436.1807684 83.8485971 0.192233595 -2.379067611 1.75E-40 1.42E-38 Down 14.22218 16.18936 13.5242 1.734479 2.81728 2.268827 XP_011077311.1 uncharacterized protein LOC105161355 isoform X1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111Z4C expressed protein -- PF13259.5 Protein of unknown function (DUF4050) TRINITY_DN20826_c4_g2_i3 181.7536992 304.0377483 59.46965002 0.195599561 -2.354024965 3.90E-29 2.13E-27 Down 14.76748 16.47318 13.89516 2.161673 2.458033 2.503116 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20841_c0_g1_i5 1876.290303 1182.401748 2570.178857 2.173693383 1.120148451 7.99E-46 7.65E-44 Up 57.58942 62.27923 59.1516 99.95156 102.5348 111.6015 XP_012830175.1 PREDICTED: 60S ribosomal protein L15-like [Erythranthe guttata] O82528|RL15_PETHY 60S ribosomal protein L15 OS=Petunia hybrida OX=4102 GN=RPL15 PE=2 SV=1 sind:105155604 K02877 "RP-L15e, RPL15" large subunit ribosomal protein L15e ko03010 Ribosome KOG1678 60s ribosomal protein L15 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1632 Ribosomal protein L15 Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF00827.16 Ribosomal L15 TRINITY_DN20841_c0_g3_i1 26.8078971 41.52647537 12.08931882 0.291123162 -1.780298468 0.001538093 0.007642984 Down 5.932853 10.29851 6.566873 2.319147 0 3.155152 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20847_c0_g2_i1 26.96448044 47.58990893 6.339051946 0.133201599 -2.908316698 0.000160729 0.00101999 Down 5.267118 2.104955 3.627168 0.844656 0 0.3520207 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20847_c1_g1_i2 79.21785122 112.8162653 45.61943719 0.404369326 -1.30625453 9.39E-06 7.64E-05 Down 7.049308 5.642906 6.497487 2.475044 1.906754 1.802353 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20847_c2_g2_i1 28.4479076 41.31527412 15.58054109 0.377113342 -1.406929903 0.013134155 0.047852853 Down 11.38297 5.154832 7.607408 1.146331 3.575708 2.570009 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20851_c0_g1_i2 1925.889035 3199.202524 652.5755465 0.203980693 -2.293495492 9.55E-170 5.16E-167 Down 195.6493 195.5256 196.9635 33.42531 32.52199 30.86117 XP_011088797.1 "superoxide dismutase [Cu-Zn], chloroplastic [Sesamum indicum]" P10792|SODCP_PETHY "Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida OX=4102 GN=SODCP PE=2 SV=1" sind:105169947 K04565 SOD1 "superoxide dismutase, Cu-Zn family" ko04146 Peroxisome KOG0441 Cu2+/Zn2+ superoxide dismutase SOD1 [P] METABOLISM Inorganic ion transport and metabolism P COG2032 Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity) Molecular Function: superoxide dismutase activity (GO:0004784);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: metal ion binding (GO:0046872); PF00080.19 Copper/zinc superoxide dismutase (SODC) TRINITY_DN20854_c0_g1_i9 70.84569888 138.3578047 3.333593086 0.024094001 -5.375182204 3.53E-34 2.31E-32 Down 6.247416 6.740118 5.763532 0.1976738 0.06538251 0.06878734 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20854_c0_g6_i1 21.81237987 40.36464262 3.26011712 0.080766654 -3.630096419 0.000382123 0.002223237 Down 5.884146 1.923562 6.414927 2.42E-42 0.921966 2.01E-25 XP_022865075.1 probable F-box protein At4g22030 [Olea europaea var. sylvestris] O65451|FB333_ARATH Probable F-box protein At4g22030 OS=Arabidopsis thaliana OX=3702 GN=At4g22030 PE=4 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBD5 F-box protein At4g22030-like -- -- -- TRINITY_DN20855_c0_g1_i2 24.0391639 39.58168629 8.496641512 0.214660928 -2.219868475 8.15E-05 0.000550934 Down 4.562234 8.21317 6.476982 1.332955 1.325893 0.842286 XP_011076096.1 uncharacterized protein At3g49140-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y9JQ NA -- -- -- TRINITY_DN20855_c0_g3_i1 18.06270284 26.76824898 9.357156702 0.349561778 -1.51638065 0.013665481 0.049456768 Down 2.41545 2.348199 3.149406 0.7387489 0.4914073 1.014216 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20855_c0_g4_i1 32.17971065 60.31682028 4.042601028 0.067022781 -3.899204643 2.47E-05 0.000185834 Down 9.888881 16.57676 6.375432 1.695491 0 1.59E-37 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20856_c2_g2_i7 63.4046925 106.4382193 20.3711657 0.191389576 -2.385415836 6.78E-07 6.67E-06 Down 9.153052 10.50158 5.521612 1.275894 1.513269 1.147999 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20856_c2_g3_i1 7.455384076 14.91076815 0 0 #NAME? 2.74E-05 0.000204319 Down 1.226034 2.409764 2.145091 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2085_c0_g1_i1 4.341668551 8.683337103 0 0 #NAME? 0.044237139 0.128501946 Down 4.02242 1.69274 0 0 0 0 KRH11299.1 hypothetical protein GLYMA_15G099800 [Glycine max] Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHP1 PE=1 SV=1 gmx:100500044 K14490 AHP histidine-containing phosphotransfer peotein ko04075 Plant hormone signal transduction KOG4747 Two-component phosphorelay intermediate involved in MAP kinase cascade regulation [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG2198 Histidine kinase Biological Process: phosphorelay signal transduction system (GO:0000160);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: cytokinin-activated signaling pathway (GO:0009736);|Molecular Function: histidine phosphotransfer kinase activity (GO:0009927);|Molecular Function: protein histidine kinase binding (GO:0043424); PF01627.22 Hpt domain TRINITY_DN20871_c1_g4_i1 38.48139825 55.81478016 21.14801634 0.378896348 -1.400124862 0.025582369 0.082752117 Down 6.488708 6.120425 2.255745 1.475827 1.599943 1.405514 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20874_c0_g1_i1 90.42564301 122.1044971 58.74678888 0.481118962 -1.055534435 0.000356101 0.002087899 Down 4.708595 3.29459 3.529139 1.455598 1.018393 2.036982 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20875_c1_g1_i1 124.9230822 173.9090884 75.93707604 0.436648117 -1.195456975 5.11E-07 5.13E-06 Down 6.432388 6.775223 5.094816 1.876459 2.130928 2.43702 PIN09401.1 hypothetical protein CDL12_18015 [Handroanthus impetiginosus] Q9XIQ7|FBT7_ARATH Probable folate-biopterin transporter 7 OS=Arabidopsis thaliana OX=3702 GN=At1g64890 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- G ENOG410XRKZ BT1 family Cellular Component: integral component of membrane (GO:0016021); "PF03092.15,PF07690.15" BT1 family|Major Facilitator Superfamily TRINITY_DN20879_c0_g2_i1 68.68636714 126.6580324 10.71470183 0.084595518 -3.563274965 1.71E-07 1.83E-06 Down 14.23389 18.61932 8.285339 1.215986 0.9217378 0.6112242 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20881_c0_g1_i2 77.82145236 48.17508142 107.4678233 2.230776164 1.157545761 0.009491287 0.036508599 Up 5.545553 2.057855 3.729816 8.968054 4.796968 6.599708 XP_012833553.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Erythranthe guttata] C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- -- -- TRINITY_DN20881_c0_g6_i3 32.45158949 64.90317898 0 0 #NAME? 8.07E-21 2.79E-19 Down 7.850693 5.048331 5.433477 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20887_c0_g1_i4 104.4687649 154.7406032 54.19692662 0.350243734 -1.513568856 6.46E-09 8.34E-08 Down 6.707392 6.504394 6.086627 1.922742 1.803511 1.731241 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20891_c0_g3_i1 5.420917079 9.739306605 1.102527553 0.113203906 -3.143004352 0.023864433 0.078181164 Down 2.353573 3.071009 0.9541685 0.5206539 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20891_c0_g5_i1 2.548484161 5.096968322 0 0 #NAME? 0.037625041 0.112942303 Down 1.568923 0.4986731 0.5909198 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20892_c0_g1_i2 23.17432461 33.57705152 12.7715977 0.380366861 -1.394536535 0.00954374 0.036660658 Down 1.471843 2.128029 2.087272 0.2963717 0.4772412 0.9668019 PIN14711.1 Triacylglycerol lipase [Handroanthus impetiginosus] Q8VY93|GDL66_ARATH GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana OX=3702 GN=At4g26790 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG3240 GDSL esterase lipase "Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);" PF00657.21 GDSL-like Lipase/Acylhydrolase TRINITY_DN20895_c0_g2_i1 9.521449846 19.04289969 0 0 #NAME? 0.000165134 0.001044877 Down 4.882919 0.7811606 4.452647 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20905_c0_g2_i1 6.912677744 13.82535549 0 0 #NAME? 0.006323722 0.025860605 Down 0.4216087 1.625777 3.951863 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20906_c0_g1_i8 77.39752039 126.8908998 27.90414101 0.219906558 -2.185037466 3.47E-12 6.40E-11 Down 4.821164 4.006923 3.614828 0.8056871 0.6334691 0.7740532 XP_011085423.1 uncharacterized membrane protein At3g27390 [Sesamum indicum] Q8GUM4|Y3739_ARATH Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana OX=3702 GN=At3g27390 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YG75 NA Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN2090_c0_g1_i1 13.10393903 26.20787806 0 0 #NAME? 9.75E-09 1.23E-07 Down 6.408648 3.467567 3.292375 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20915_c0_g1_i2 9.844947371 15.26186468 4.428030057 0.290136897 -1.78519432 0.042807831 0.125228838 Down 0.8883201 2.591154 1.770676 0.1624463 0.6538133 0.3474513 XP_011083898.1 "glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic-like, partial [Sesamum indicum]" P55242|GLGL2_SOLTU "Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 GN=AGPS2 PE=2 SV=1" sind:105166289 K00975 glgC glucose-1-phosphate adenylyltransferase ko00520|ko00500 Amino sugar and nucleotide sugar metabolism|Starch and sucrose metabolism -- -- -- -- -- -- -- -- Molecular Function: ATP binding (GO:0005524);|Biological Process: glycogen biosynthetic process (GO:0005978);|Molecular Function: glucose-1-phosphate adenylyltransferase activity (GO:0008878);|Cellular Component: amyloplast (GO:0009501);|Cellular Component: chloroplast (GO:0009507);|Biological Process: starch biosynthetic process (GO:0019252); -- -- TRINITY_DN20915_c1_g1_i3 28.62106475 57.24212951 0 0 #NAME? 6.15E-18 1.77E-16 Down 3.00599 4.782467 5.408746 3.66E-98 8.69E-77 7.02E-111 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20915_c1_g2_i2 46.65780896 93.31561792 0 0 #NAME? 1.19E-29 6.57E-28 Down 6.375985 9.069072 6.740706 0 0 1.92E-33 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20916_c0_g1_i2 29.0129105 44.26418735 13.76163365 0.310897691 -1.685488192 0.000571225 0.003179596 Down 4.975561 5.899294 6.899377 1.200127 1.617023 1.625812 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20916_c0_g2_i1 55.75165046 89.82290361 21.68039731 0.241368253 -2.050692164 0.000975169 0.005104457 Down 8.519962 11.28735 4.525867 1.596715 1.132594 2.035029 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20918_c0_g1_i6 119.0469058 229.400166 8.693645652 0.037897295 -4.721761332 6.57E-31 3.82E-29 Down 19.08482 14.10564 14.12086 6.80E-34 1.435035 4.78E-44 KZV33088.1 hypothetical protein F511_03354 [Dorcoceras hygrometricum] Q8VZ14|RMR2_ARATH "Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=RMR2 PE=2 SV=1" sind:105175959 K15692 "RNF13, RZF" E3 ubiquitin-protein ligase RNF13 -- -- KOG4628 Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410Z5DF Ring finger protein Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: extrinsic component of vacuolar membrane (GO:0000306);|Cellular Component: protein storage vacuole (GO:0000326);|Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);|Biological Process: protein transport (GO:0015031);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: protein storage vacuole membrane (GO:0032586);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: ubiquitin protein ligase activity (GO:0061630); -- -- TRINITY_DN20920_c0_g1_i4 74.47607951 148.2276886 0.724470471 0.004887552 -7.676672362 2.20E-43 1.95E-41 Down 16.11632 14.96504 13.66033 0 0.1975018 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20920_c0_g2_i3 55.95211758 103.7596403 8.144594857 0.078494825 -3.671258638 1.33E-07 1.44E-06 Down 4.010167 8.945587 8.331633 0.149139 0.753687 0.4552335 XP_011090259.1 G2/mitotic-specific cyclin S13-7 [Sesamum indicum] Q0DH40|CCB15_ORYSJ Cyclin-B1-5 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-5 PE=3 SV=1 -- -- -- -- -- -- KOG0653 Cyclin B and related kinase-activating proteins [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D COG5024 g2 mitotic-specific Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);|Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: cyclin-dependent protein kinase holoenzyme complex (GO:0000307);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: regulation of mitotic nuclear division (GO:0007088);|Biological Process: positive regulation of cell proliferation (GO:0008284);|Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);|Molecular Function: protein kinase binding (GO:0019901);|Biological Process: positive regulation of cell cycle (GO:0045787);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN20920_c0_g3_i1 27.73504745 55.47009489 0 0 #NAME? 1.60E-05 0.000125179 Down 6.18738 18.51502 6.198959 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20920_c0_g4_i1 34.51774328 69.03548657 0 0 #NAME? 1.85E-11 3.19E-10 Down 3.942228 9.705267 7.132717 6.19E-39 1.32E-82 3.07E-57 pir||S49904 cyclin - common tobacco Q39067|CCB12_ARATH Cyclin-B1-2 OS=Arabidopsis thaliana OX=3702 GN=CYCB1-2 PE=1 SV=2 -- -- -- -- -- -- KOG0653 Cyclin B and related kinase-activating proteins [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D COG5024 g2 mitotic-specific Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);|Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: cyclin-dependent protein kinase holoenzyme complex (GO:0000307);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: regulation of mitotic nuclear division (GO:0007088);|Biological Process: positive regulation of cell proliferation (GO:0008284);|Biological Process: response to gamma radiation (GO:0010332);|Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);|Molecular Function: protein kinase binding (GO:0019901);|Biological Process: positive regulation of cell cycle (GO:0045787);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN20920_c0_g5_i1 40.35472924 80.70945849 0 0 #NAME? 4.75E-15 1.10E-13 Down 7.419785 15.28352 14.7627 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20920_c0_g6_i1 34.53014407 69.06028814 0 0 #NAME? 8.63E-18 2.46E-16 Down 9.164385 15.68364 10.00006 0 0 8.67E-77 PNX72657.1 "G2/mitotic-specific cyclin s13-6-like protein, partial [Trifolium pratense]" P25012|CCNB2_SOYBN G2/mitotic-specific cyclin S13-7 (Fragment) OS=Glycine max OX=3847 PE=2 SV=1 -- -- -- -- -- -- KOG0653 Cyclin B and related kinase-activating proteins [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D COG5024 g2 mitotic-specific Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);|Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: cyclin-dependent protein kinase holoenzyme complex (GO:0000307);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: regulation of mitotic nuclear division (GO:0007088);|Biological Process: positive regulation of cell proliferation (GO:0008284);|Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);|Molecular Function: protein kinase binding (GO:0019901);|Biological Process: positive regulation of cell cycle (GO:0045787);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN20922_c0_g2_i1 7.325020299 2.366174951 12.28386565 5.191444377 2.376135985 0.022759618 0.075251462 Up 1.076111 0 0.4194977 1.641667 2.212973 2.383381 XP_011076552.1 "cell division cycle 20.2, cofactor of APC complex-like [Sesamum indicum]" Q3E906|CD205_ARATH "Cell division cycle 20.5, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-5 PE=1 SV=3" sind:105160771 K03363 CDC20 "cell division cycle 20, cofactor of APC complex" ko04120 Ubiquitin mediated proteolysis KOG0305 "Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits" [DO] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning |Posttranslational modification, protein turnover, chaperones " S ENOG410YCTW anaphase-promoting complex subunit cdc20-like -- -- -- TRINITY_DN20922_c1_g1_i1 12.60513476 19.34102978 5.869239735 0.30346056 -1.720419068 0.0214682 0.071702304 Down 1.711184 1.528201 3.432407 0.4602457 0.9345334 0.2379618 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20932_c0_g3_i1 89.71731342 36.14605477 143.2885721 3.96415523 1.987013457 2.49E-12 4.66E-11 Up 2.307117 1.2047 1.984051 5.088255 5.926068 6.56343 PIN18015.1 HMG box-containing protein [Handroanthus impetiginosus] Q9SGS2|HMGB9_ARATH High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV=1 -- -- -- -- -- -- KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain [K] INFORMATION STORAGE AND PROCESSING Transcription S ENOG410Y2AP At rich interactive domain "Biological Process: karyogamy (GO:0000741);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: polar nucleus fusion (GO:0010197);" "PF01388.20,PF00505.18,PF09011.9" ARID/BRIGHT DNA binding domain|HMG (high mobility group) box|HMG-box domain TRINITY_DN20933_c0_g1_i2 420.617772 226.6374604 614.5980836 2.711811553 1.439256928 2.25E-26 1.05E-24 Up 4.055224 4.569332 4.199699 9.049404 9.171012 9.827434 KZV14417.1 putative LRR receptor-like serine/threonine-protein kinase [Dorcoceras hygrometricum] Q1MX30|XA21_ORYSI Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: positive regulation of defense response (GO:0031349);|Biological Process: protein autophosphorylation (GO:0046777);|Biological Process: positive regulation of defense response to bacterium (GO:1900426); "PF13855.5,PF00069.24,PF07714.16,PF12799.6,PF00560.32,PF13516.5" Leucine rich repeat|Protein kinase domain|Protein tyrosine kinase|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine Rich repeat TRINITY_DN20933_c0_g4_i1 4.753185292 8.771352215 0.735018369 0.083797612 -3.57694706 0.019982794 0.067753134 Down 1.52051 1.37202 1.275621 0.3090649 2.08E-25 4.12E-109 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20937_c0_g1_i1 124.9429931 249.8859861 0 0 #NAME? 1.18E-76 2.25E-74 Down 18.37704 17.56936 15.514 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20937_c1_g6_i1 69.11876429 93.00508705 45.23244154 0.486343736 -1.039951757 0.000830554 0.004432325 Down 11.34122 14.39668 11.44002 5.456287 2.925021 6.224555 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20937_c1_g9_i1 15.96556358 30.47163833 1.45948884 0.047896632 -4.383931986 2.56E-07 2.68E-06 Down 2.196161 2.857874 2.063022 0.1160509 0.1154618 3.92E-26 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20944_c0_g1_i1 10.03854144 16.9907761 3.086306774 0.181646015 -2.460798377 0.006540167 0.026637756 Down 4.099311 2.703894 2.163878 0 0 1.425909 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20950_c1_g2_i6 190.9208121 304.5628249 77.27879932 0.253736809 -1.978595272 8.92E-23 3.43E-21 Down 22.29629 21.011 17.50581 3.722325 4.438044 4.263106 XP_011656133.1 PREDICTED: uncharacterized protein LOC105435633 [Cucumis sativus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XWK2 transposon protein -- -- -- TRINITY_DN20950_c1_g4_i1 12.98484951 19.57862623 6.3910728 0.326431116 -1.615149513 0.029238082 0.092295151 Down 1.436324 0.6874715 1.300414 0.2005435 0.2002102 0.4893773 XP_020082516.1 uncharacterized protein LOC109706122 [Ananas comosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XWK2 transposon protein -- "PF04937.14,PF05699.13" Protein of unknown function (DUF 659)|hAT family C-terminal dimerisation region TRINITY_DN20951_c0_g1_i1 28.70598359 42.54007471 14.87189247 0.349597234 -1.516234323 0.00693236 0.028013945 Down 7.039295 8.764314 3.558042 1.384777 2.0784 2.016783 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20953_c2_g1_i3 23.85452931 36.59064859 11.11841002 0.303859332 -1.718524497 0.002169999 0.010329571 Down 6.589909 6.523099 4.146227 0.4683929 2.326618 1.424372 -- -- -- -- sind:105156863 K14844 PUF6 pumilio homology domain family member 6 -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20961_c0_g1_i1 45.30098776 61.84013595 28.76183957 0.465099876 -1.104387539 0.003798912 0.016740513 Down 2.79796 2.610529 2.88928 0.8668882 0.8926592 1.381735 XP_012833571.1 PREDICTED: embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein [Erythranthe guttata] Q04471|YM04_YEAST Putative peptidase YMR114C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YMR114C PE=1 SV=1 -- -- -- -- -- -- KOG2618 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S COG2135 conserved protein Molecular Function: peptidase activity (GO:0008233); PF02586.13 SOS response associated peptidase (SRAP) TRINITY_DN20962_c0_g1_i1 1182.55762 612.497263 1752.617977 2.861429892 1.51673626 9.18E-51 1.02E-48 Up 9.490049 8.881348 9.174208 22.29944 21.64959 19.63464 XP_011079478.1 ABC transporter B family member 4 [Sesamum indicum] Q9FWX7|AB11B_ARATH ABC transporter B family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCB11 PE=2 SV=1 sind:105162987 K05658 ABCB1 "ATP-binding cassette, subfamily B (MDR/TAP), member 1" ko02010 ABC transporters KOG0055 "Multidrug/pheromone exporter, ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1132 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: auxin efflux transmembrane transporter activity (GO:0010329);|Biological Process: basipetal auxin transport (GO:0010540);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);" "PF00664.22,PF00005.26" ABC transporter transmembrane region|ABC transporter TRINITY_DN20963_c2_g1_i1 262.6073519 126.4454305 398.7692733 3.153686706 1.657039347 6.61E-23 2.56E-21 Up 7.0159 6.456878 7.292108 19.1123 17.64259 16.02647 PIN01522.1 Nicotianamine synthase [Handroanthus impetiginosus] Q9XGI7|NAS_SOLLC Nicotianamine synthase OS=Solanum lycopersicum OX=4081 GN=CHLN PE=2 SV=1 sind:105168955 K05953 E2.5.1.43 nicotianamine synthase -- -- -- -- -- -- -- E ENOG4111NF0 "as a sensor for the physiological iron status within the plant, and or might be involved in the transport of iron" Molecular Function: nicotianamine synthase activity (GO:0030410);|Biological Process: nicotianamine biosynthetic process (GO:0030418); "PF03059.15,PF13847.5" Nicotianamine synthase protein|Methyltransferase domain TRINITY_DN20970_c0_g1_i1 20.90216107 41.80432214 0 0 #NAME? 0.003005463 0.013679635 Down 4.845954 9.011916 4.61E-77 0 0 1.41E-48 XP_017430799.1 "PREDICTED: chlorophyll a-b binding protein 215, chloroplastic [Vigna angularis]" P27520|CB215_PEA "Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum OX=3888 GN=CAB215 PE=1 SV=1" gmx:100815789 K08913 LHCB2 light-harvesting complex II chlorophyll a/b binding protein 2 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- J ENOG410ZHBU Chlorophyll A-B binding protein "Cellular Component: photosystem I (GO:0009522);|Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis, light harvesting (GO:0009765);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: metal ion binding (GO:0046872);" PF00504.20 Chlorophyll A-B binding protein TRINITY_DN20970_c1_g2_i1 7781.042166 11052.79074 4509.293589 0.407977831 -1.293437336 1.38E-101 3.57E-99 Down 1011.094 1022.523 1050.596 341.3205 347.0197 326.9254 XP_008456347.1 PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] P08221|CB21_CUCSA "Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1" cmo:103496313 K08912 LHCB1 light-harvesting complex II chlorophyll a/b binding protein 1 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- J ENOG410ZHBU Chlorophyll A-B binding protein "Cellular Component: photosystem I (GO:0009522);|Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis, light harvesting (GO:0009765);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: metal ion binding (GO:0046872);" PF00504.20 Chlorophyll A-B binding protein TRINITY_DN20974_c0_g2_i3 30.2812182 41.61384191 18.9485945 0.45534355 -1.134972647 0.018025415 0.062128143 Down 3.501049 1.751567 2.383467 1.265824 0.6997163 0.8663622 XP_022859866.1 uncharacterized protein LOC111380514 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF03732.16 Retrotransposon gag protein TRINITY_DN20974_c0_g3_i1 29.82501351 48.99825325 10.65177376 0.217390888 -2.201636627 0.008286591 0.032573019 Down 13.51481 6.812513 5.028651 1.458451 2.206466 0.6878541 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20977_c0_g2_i1 31.64466322 63.28932645 0 0 #NAME? 1.76E-20 5.93E-19 Down 5.546655 5.502592 6.281514 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20977_c0_g3_i1 48.72473272 97.44946545 0 0 #NAME? 2.26E-18 6.66E-17 Down 10.9149 8.119345 5.734014 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20977_c0_g4_i1 20.36017296 40.72034592 0 0 #NAME? 1.97E-13 4.04E-12 Down 2.892388 4.247481 4.141964 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20977_c2_g3_i1 16.35077049 27.00892821 5.692612756 0.210767814 -2.246273523 0.001136853 0.005846284 Down 5.945834 7.02095 4.141832 0.004674636 0.7352471 2.315758 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20977_c2_g4_i2 34.23545594 50.51641998 17.95449191 0.35541893 -1.492407574 0.000983452 0.00514366 Down 8.021113 9.414775 10.1035 3.381012 3.802269 0.7528924 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20977_c2_g6_i1 13.70981033 23.25961339 4.160007267 0.178851093 -2.483169164 0.001430926 0.007171693 Down 3.945824 5.009757 1.925925 0.2705268 0.2721392 1.089827 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20977_c2_g7_i1 13.22273294 22.28545861 4.160007267 0.186669134 -2.421444697 0.001861258 0.009032295 Down 2.934827 3.961365 2.78551 0.2729662 0.2688491 0.9307657 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN20994_c0_g1_i1 199.4477934 126.1581076 272.7374792 2.161870405 1.112280042 2.04E-09 2.80E-08 Up 6.619844 6.926874 5.972958 10.46908 11.12755 12.46998 XP_011094375.1 uridine nucleosidase 1-like [Sesamum indicum] Q9SJM7|URH1_ARATH Uridine nucleosidase 1 OS=Arabidopsis thaliana OX=3702 GN=URH1 PE=1 SV=2 sind:105174088 K01240 URH1 uridine nucleosidase ko00240|ko00760 Pyrimidine metabolism|Nicotinate and nicotinamide metabolism KOG2938 Predicted inosine-uridine preferring nucleoside hydrolase [F] METABOLISM Nucleotide transport and metabolism F COG1957 nucleoside hydrolase Cellular Component: cytosol (GO:0005829);|Biological Process: purine nucleoside catabolic process (GO:0006152);|Biological Process: uridine catabolic process (GO:0006218);|Molecular Function: purine nucleosidase activity (GO:0008477);|Molecular Function: uridine nucleosidase activity (GO:0045437);|Molecular Function: adenosine nucleosidase activity (GO:0047622);|Molecular Function: inosine nucleosidase activity (GO:0047724);|Molecular Function: xanthosine nucleotidase activity (GO:0072585); PF01156.18 Inosine-uridine preferring nucleoside hydrolase TRINITY_DN20_c0_g1_i1 4.005215006 8.010430013 0 0 #NAME? 0.013604557 0.049281913 Down 2.00773 0 2.47098 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21004_c2_g1_i1 8.490138905 0 16.98027781 Inf Inf 1.73E-06 1.59E-05 Up 0 0 0 2.665755 2.19568 1.297472 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21004_c3_g1_i1 17.36782714 2.312087404 32.42356688 14.02350397 3.809774967 2.74E-07 2.85E-06 Up 0.1035033 0.3964545 0.2386845 2.202057 2.517375 3.142962 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21004_c3_g4_i1 25.04431152 15.15260331 34.93601973 2.305611717 1.205149572 0.019778901 0.06719231 Up 4.109168 1.369361 2.797056 5.491605 4.797048 5.155669 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21004_c3_g5_i4 37.00883937 6.180419302 67.83725944 10.97615811 3.456301263 6.09E-07 6.04E-06 Up 1.136894 0.09420348 0.2165982 2.652895 5.81582 4.164182 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21006_c0_g1_i10 325.1216637 464.8024987 185.4408288 0.398966936 -1.325658905 1.54E-18 4.58E-17 Down 17.25344 16.23926 18.7077 5.14799 5.83172 5.826152 XP_015088418.1 PREDICTED: uncharacterized protein LOC107031522 isoform X2 [Solanum pennellii] Q1H5E9|PRDA1_ARATH "Protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PRDA1 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y289 NA "Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: chloroplast organization (GO:0009658);|Cellular Component: chloroplast nucleoid (GO:0042644);" -- -- TRINITY_DN21016_c2_g2_i3 646.5746119 1210.312649 82.83657466 0.068442294 -3.868968065 1.23E-177 7.14E-175 Down 15.86784 15.95182 14.16022 0.7501373 1.104769 0.6830199 PWA63920.1 reverse transcriptase domain-containing protein [Artemisia annua] Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=3 SV=2 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" "PF00078.26,PF03732.16,PF13650.5,PF00665.25" Reverse transcriptase (RNA-dependent DNA polymerase)|Retrotransposon gag protein|Aspartyl protease|Integrase core domain TRINITY_DN21016_c2_g3_i1 4.943244279 9.886488557 0 0 #NAME? 0.001325605 0.006700052 Down 2.404586 1.347635 0.5460633 6.23E-74 0 0 OTG20186.1 putative reverse transcriptase domain-containing protein [Helianthus annuus] Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=3 SV=2 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" -- -- TRINITY_DN21019_c0_g1_i7 153.5841584 217.5627417 89.6055752 0.411860848 -1.279771108 1.94E-09 2.67E-08 Down 5.551078 6.963813 7.568344 2.662479 1.798158 2.227394 XP_012830467.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Erythranthe guttata] Q1MX30|XA21_ORYSI Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: positive regulation of defense response (GO:0031349);|Biological Process: protein autophosphorylation (GO:0046777);|Biological Process: positive regulation of defense response to bacterium (GO:1900426); "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN21019_c0_g2_i1 13.88577068 25.07102293 2.700518427 0.107714728 -3.214712563 0.001263872 0.006426676 Down 1.81051 5.980913 5.571567 0 0 1.092236 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21027_c2_g2_i13 212.7513476 381.1156656 44.38702956 0.116466033 -3.102018841 2.20E-51 2.48E-49 Down 8.532373 9.806208 9.479172 0.7054087 0.8213834 1.08884 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21027_c2_g3_i2 15.98899787 26.74428799 5.23370776 0.195694414 -2.353325521 0.000733412 0.003965194 Down 1.464965 3.182163 2.498982 0.3252106 0.3237127 0.5210782 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2102_c0_g1_i1 5.303773668 9.872528967 0.735018369 0.07445087 -3.747567486 0.010317011 0.039062479 Down 0.6636779 2.615863 1.413466 0.2490619 0 0 XP_011081407.1 uncharacterized protein LOC105164455 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZJGG Transposon protein -- "PF10551.8,PF00872.17" "MULE transposase domain|Transposase, Mutator family" TRINITY_DN21033_c2_g1_i2 7.385856108 12.58247896 2.18923326 0.173990616 -2.5229186 0.02291755 0.075663325 Down 1.46494 3.12999 1.126328 0.3542389 0.3498772 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21034_c0_g5_i1 7.311102309 13.15216788 1.470036737 0.11177144 -3.161376505 0.00521524 0.021954502 Down 1.767915 2.004102 3.266376 0.6943082 0 6.33E-77 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21039_c0_g1_i2 230.214906 142.2833069 318.146505 2.236007245 1.160924863 1.73E-11 3.00E-10 Up 7.360034 7.461459 6.043598 12.56012 12.8903 12.13023 PIN14715.1 hypothetical protein CDL12_12649 [Handroanthus impetiginosus] Q9FE06|EXOL2_ARATH Protein EXORDIUM-like 2 OS=Arabidopsis thaliana OX=3702 GN=EXL2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41107QF "phosphate-induced protein 1 conserved region domain containing protein, expressed" Cellular Component: extracellular space (GO:0005615);|Cellular Component: cell wall (GO:0005618);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: apoplast (GO:0048046); PF04674.11 Phosphate-induced protein 1 conserved region TRINITY_DN21040_c0_g2_i1 15.94492582 27.11750619 4.772345448 0.175987623 -2.506454128 0.023261213 0.076553052 Down 5.885779 7.436658 1.661675 1.973735 0.1926447 6.94E-28 KZV26162.1 hypothetical protein F511_06329 [Dorcoceras hygrometricum] Q9FF52|RL123_ARATH 60S ribosomal protein L12-3 OS=Arabidopsis thaliana OX=3702 GN=RPL12C PE=2 SV=1 sot:102600463 K02870 "RP-L12e, RPL12" large subunit ribosomal protein L12e ko03010 Ribosome KOG0886 40S ribosomal protein S2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0080 This protein binds directly to 23S ribosomal RNA (By similarity) Biological Process: ribosomal large subunit assembly (GO:0000027);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF00298.18 "Ribosomal protein L11, RNA binding domain" TRINITY_DN21042_c0_g1_i2 152.1401229 84.80538544 219.4748604 2.587982582 1.371827907 1.07E-10 1.71E-09 Up 3.671532 4.804582 3.778627 8.502266 8.624555 8.369953 XP_011071534.1 ribonucleoside-diphosphate reductase small chain A [Sesamum indicum] P50651|RIR2A_ARATH Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana OX=3702 GN=RNR2A PE=1 SV=2 sind:105156960 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 ko00230|ko00480|ko00240 Purine metabolism|Glutathione metabolism|Pyrimidine metabolism KOG1567 "Ribonucleotide reductase, beta subunit" [F] METABOLISM Nucleotide transport and metabolism F COG0208 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity) "Molecular Function: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (GO:0004748);|Cellular Component: cytosol (GO:0005829);|Cellular Component: ribonucleoside-diphosphate reductase complex (GO:0005971);|Biological Process: DNA replication (GO:0006260);|Biological Process: DNA repair (GO:0006281);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: ribonucleotide metabolic process (GO:0009259);|Biological Process: deoxyribonucleotide biosynthetic process (GO:0009263);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: regulation of cell cycle (GO:0051726);" PF00268.20 "Ribonucleotide reductase, small chain" TRINITY_DN21045_c1_g1_i7 28.07718303 55.06766036 1.086705707 0.019734009 -5.663172116 7.52E-15 1.72E-13 Down 5.93503 5.118693 5.194214 0 0.2980117 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21049_c2_g1_i1 47.61147391 65.01708194 30.20586588 0.464583537 -1.105990064 0.003681418 0.016298703 Down 4.707459 5.125818 3.794109 1.855211 1.297657 2.001873 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21049_c2_g3_i2 21.20252385 30.58781832 11.81722938 0.386337766 -1.372065383 0.025859131 0.083492676 Down 1.317597 3.368977 3.687342 1.259621 0.8237413 0.4871158 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21053_c0_g1_i4 32.6011398 48.50866305 16.69361654 0.34413681 -1.538945881 0.000777611 0.004174324 Down 2.638312 4.263212 4.304056 0.8310727 1.295494 1.007438 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2105_c0_g1_i1 4.810924166 9.621848332 0 0 #NAME? 0.001252252 0.006372589 Down 1.014359 2.497769 2.34926 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21067_c0_g2_i1 15.68499715 24.92935797 6.440636338 0.258355484 -1.952570589 0.004868628 0.020730691 Down 3.146116 3.603814 2.167489 0 0.5557941 1.371885 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21080_c0_g3_i1 15.72841232 23.60098905 7.855835588 0.33286044 -1.587010678 0.017893891 0.061773321 Down 1.502371 3.591289 2.633331 0.7019419 0.4618459 0.9470126 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21084_c0_g2_i2 41.01224248 56.52928647 25.49519849 0.451008673 -1.148772917 0.04901769 0.139449738 Down 15.39059 5.718157 10.67921 4.707258 4.207105 2.737317 XP_015381967.1 uncharacterized protein LOC107175113 [Citrus sinensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21084_c0_g3_i2 19.00495637 27.27693174 10.73298099 0.393481976 -1.345630543 0.026071974 0.084042403 Down 3.871806 6.427269 5.682898 1.983839 1.625165 1.275402 XP_017233167.1 "PREDICTED: uncharacterized protein LOC108207215, partial [Daucus carota subsp. sativus]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN21086_c1_g2_i1 22.62046791 40.09616657 5.144769264 0.128310751 -2.962286032 1.37E-06 1.29E-05 Down 3.080123 4.343735 4.411527 0.4050585 0.6099554 0.2041049 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21090_c0_g1_i1 6.78311613 13.56623226 0 0 #NAME? 9.11E-05 0.000609111 Down 1.645254 0.6394858 2.523853 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21090_c1_g1_i3 33.54895043 49.64043889 17.45746197 0.351678236 -1.507672041 0.000905888 0.00477873 Down 4.045244 3.427093 4.085231 1.060988 1.160045 1.093248 DAA64886.1 TPA_inf: L18 ribosomal protein Heart Stopper [Erythranthe nasuta] -- -- -- -- -- -- -- -- -- -- -- -- -- O COG5560 ubiquitin carboxyl-terminal hydrolase -- -- -- TRINITY_DN21101_c4_g1_i3 354.9032563 215.3033402 494.5031724 2.296774272 1.199609075 9.74E-17 2.57E-15 Up 7.301153 8.008595 7.684949 15.68889 13.51212 13.44803 XP_011081934.1 cytochrome P450 71D95-like [Sesamum indicum] Q9XHE7|C71DD_MENPI Cytochrome P450 71D13 OS=Mentha piperita OX=34256 GN=CYP71D13 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: (S)-limonene 3-monooxygenase activity (GO:0018674);|Molecular Function: heme binding (GO:0020037);|Biological Process: oxidation-reduction process (GO:0055114); PF00067.21 Cytochrome P450 TRINITY_DN21101_c4_g2_i1 12.68239702 23.86874688 1.496047164 0.062678077 -3.995895263 1.56E-05 0.000121783 Down 4.789887 2.555445 2.364947 0 0.2556574 0.2640874 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21101_c4_g3_i1 15.64355535 24.97724512 6.309865569 0.25262456 -1.984933189 0.00460031 0.019743016 Down 2.589451 2.70502 2.072378 0.2028724 0.8004602 0.5794166 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21101_c4_g4_i1 50.30799317 85.4586399 15.15734643 0.177364705 -2.49520915 4.82E-07 4.84E-06 Down 22.584 13.58566 16.40564 2.641623 0.05488211 4.935855 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21101_c5_g1_i1 20.52305982 36.85728532 4.188834327 0.113650104 -3.137329085 0.030974566 0.096714022 Down 7.187314 2.722745 1.423624 0.2642501 0 0.7839133 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21105_c0_g1_i1 34.20989232 68.41978463 0 0 #NAME? 5.13E-17 1.38E-15 Down 9.493903 15.81451 18.36752 0 0 1.31E-37 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21105_c0_g4_i4 118.9442604 199.6598495 38.22867124 0.191468998 -2.384817283 7.86E-21 2.72E-19 Down 17.97676 15.23929 18.83451 1.818737 2.166628 4.020279 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21105_c0_g5_i1 14.48263875 28.9652775 0 0 #NAME? 1.17E-09 1.65E-08 Down 5.666184 5.109088 4.656648 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21105_c0_g6_i3 9.251519339 17.34567364 1.15736504 0.066723557 -3.905659994 0.000221851 0.001363825 Down 2.170478 2.675068 4.202865 0 0 0.4386849 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21105_c0_g7_i1 32.96439754 65.5612859 0.367509184 0.005605582 -7.478920037 8.04E-20 2.60E-18 Down 3.781188 3.238149 3.56375 0.04431423 4.83E-94 2.36E-58 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21105_c0_g8_i1 2.738894267 5.477788533 0 0 #NAME? 0.026513395 0.085235306 Down 1.100461 0 1.669231 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21114_c0_g1_i2 174.5605403 275.3403868 73.78069378 0.267961757 -1.899900979 3.53E-20 1.16E-18 Down 13.08991 12.98621 15.12333 2.961298 3.25547 2.675385 EYU18150.1 hypothetical protein MIMGU_mgv1a015404mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z5JU NA -- -- -- TRINITY_DN21117_c4_g1_i1 487.309064 796.7343012 177.8838269 0.223266184 -2.16316334 2.08E-18 6.14E-17 Down 83.25897 109.2436 107.2253 26.38495 13.67709 13.85671 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21120_c1_g4_i1 112.8136484 63.08537705 162.5419198 2.57653877 1.365434301 0.000173339 0.001092375 Up 4.645129 6.520142 5.580242 7.917771 12.48657 14.49006 XP_011077701.1 cytochrome P450 71A1-like [Sesamum indicum] O65788|C71B2_ARATH Cytochrome P450 71B2 OS=Arabidopsis thaliana OX=3702 GN=CYP71B2 PE=2 SV=2 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Biological Process: heat acclimation (GO:0010286);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN21120_c1_g5_i1 13.39340767 26.78681533 0 0 #NAME? 7.38E-07 7.23E-06 Down 3.606157 7.465611 3.075556 1.95E-43 2.32E-42 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21123_c0_g2_i1 15.03818901 1.476234274 28.60014374 19.37371612 4.276028802 6.74E-07 6.63E-06 Up 0 0 0.96178 6.792791 3.457627 4.554404 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2112_c0_g1_i1 20.62462926 36.30712667 4.942131858 0.136120159 -2.877047352 0.000466713 0.002656821 Down 3.098719 5.001747 1.968478 0.2909376 0 0.8161251 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21141_c0_g1_i1 34.46186026 47.78870939 21.13501113 0.442259509 -1.177034934 0.007716734 0.030678377 Down 1.605074 2.766847 2.338093 0.8733914 0.8164847 0.7295149 AQZ42316.1 fatty acid desaturase [Perilla citriodora] P48624|FAD3E_BRANA "Acyl-lipid omega-3 desaturase (cytochrome b5), endoplasmic reticulum OS=Brassica napus OX=3708 GN=FAD3 PE=1 SV=1" sind:105163949 K10257 "FAD3, FAD7, FAD8, desB" acyl-lipid omega-3 desaturase -- -- -- -- -- -- -- I COG3239 linoleoyl-CoA desaturase activity "Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water (GO:0016717);" "PF00487.23,PF11960.7" Fatty acid desaturase|Domain of unknown function (DUF3474) TRINITY_DN21151_c0_g2_i1 17.77819894 35.55639788 0 0 #NAME? 0.001298053 0.006573975 Down 10.79859 3.188769 2.207999 7.96E-25 4.15E-24 1.23E-23 EPS69246.1 "p0 ribosomal protein-like protein, partial [Genlisea aurea]" P41095|RLA0_ORYSJ 60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0130500 PE=1 SV=3 sind:105160899 K02941 "RP-LP0, RPLP0" large subunit ribosomal protein LP0 ko03010 Ribosome KOG0815 60S acidic ribosomal protein P0 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0244 50s ribosomal protein L10 Biological Process: ribosomal large subunit assembly (GO:0000027);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Molecular Function: large ribosomal subunit rRNA binding (GO:0070180); -- -- TRINITY_DN21153_c0_g1_i1 36.93749996 71.64393438 2.231065533 0.031141025 -5.005039771 1.42E-17 3.96E-16 Down 4.248765 4.927983 4.203307 0.08355213 0.08149056 0.0903775 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21153_c0_g2_i2 10.53749283 21.07498566 0 0 #NAME? 4.13E-07 4.19E-06 Down 2.578815 2.622851 1.307052 0 0 0 XP_022861976.1 mitogen-activated protein kinase kinase kinase NPK1-like isoform X1 [Olea europaea var. sylvestris] O22042|M3K3_ARATH Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana OX=3702 GN=ANP3 PE=1 SV=1 -- -- -- -- -- -- KOG0198 MEKK and related serine/threonine protein kinases [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XQGS mitogen-activated protein kinase kinase kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: MAP kinase kinase kinase activity (GO:0004709);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874);|Biological Process: signal transduction by protein phosphorylation (GO:0023014);|Biological Process: stress-activated protein kinase signaling cascade (GO:0031098);|Biological Process: activation of protein kinase activity (GO:0032147);|Biological Process: cortical microtubule organization (GO:0043622);|Biological Process: protein autophosphorylation (GO:0046777);|Cellular Component: apoplast (GO:0048046); -- -- TRINITY_DN21153_c0_g3_i5 71.54630203 97.04836289 46.04424118 0.474446346 -1.075683149 0.000431256 0.002476094 Down 6.124719 5.02266 6.125999 2.303361 2.181891 2.125064 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21153_c0_g4_i4 50.84338625 27.98112131 73.70565119 2.634120712 1.39732146 0.000105401 0.000695211 Up 1.453982 1.308124 1.069051 2.01951 2.971552 3.140136 XP_011099937.1 U-box domain-containing protein 21-like [Sesamum indicum] Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410Y3P9 Ubox domain-containing protein Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Biological Process: response to chitin (GO:0010200); PF04564.14 U-box domain TRINITY_DN21153_c0_g5_i1 8.98116055 1.302446252 16.65987485 12.7912187 3.67708182 0.000267986 0.001618077 Up 0.7146336 0 0 3.205561 2.57706 2.105454 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21156_c0_g1_i3 101.705824 137.9205323 65.49111563 0.474846743 -1.074466136 2.87E-05 0.000212862 Down 8.194193 7.660469 8.385256 3.436355 2.622585 3.264874 XP_012844360.1 PREDICTED: ribonucleoside-diphosphate reductase small chain [Erythranthe guttata] P49730|RIR2_TOBAC Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum OX=4097 PE=2 SV=1 sind:105177429 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 ko00230|ko00480|ko00240 Purine metabolism|Glutathione metabolism|Pyrimidine metabolism KOG1567 "Ribonucleotide reductase, beta subunit" [F] METABOLISM Nucleotide transport and metabolism F COG0208 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity) "Molecular Function: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (GO:0004748);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA replication (GO:0006260);|Biological Process: deoxyribonucleotide biosynthetic process (GO:0009263);|Molecular Function: metal ion binding (GO:0046872);" PF00268.20 "Ribonucleotide reductase, small chain" TRINITY_DN21157_c1_g2_i2 55.52887382 100.5196728 10.53807485 0.104835945 -3.253794642 3.94E-16 9.89E-15 Down 4.457674 3.346666 3.375489 0.2611474 0.1697356 0.5391879 XP_016481978.1 PREDICTED: BAG family molecular chaperone regulator 2-like [Nicotiana tabacum] Q0WUQ1|BAG1_ARATH BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana OX=3702 GN=BAG1 PE=1 SV=1 -- -- -- -- -- -- KOG4361 BCL2-associated athanogene-like proteins and related BAG family chaperone regulators [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms O ENOG4111WNH BCL-2-associated athanogene Cellular Component: nucleus (GO:0005634);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: cytosol (GO:0005829);|Molecular Function: chaperone binding (GO:0051087);|Biological Process: cytoplasm protein quality control by the ubiquitin-proteasome system (GO:0071629); -- -- TRINITY_DN21157_c1_g5_i3 39.68541324 78.63580812 0.735018369 0.00934712 -6.741262303 5.15E-20 1.68E-18 Down 4.401921 7.053584 4.721363 0.0934158 2.28E-45 4.36E-51 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21157_c1_g6_i1 16.67130254 32.61813461 0.724470471 0.022210665 -5.492603581 7.85E-05 0.000533205 Down 4.007151 2.05038 1.282383 0 0.1507628 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21164_c0_g1_i6 160.5803112 257.1086611 64.05196124 0.24912409 -2.005063559 4.06E-20 1.33E-18 Down 9.176756 11.2918 10.07894 2.081862 2.899867 1.140334 XP_021642931.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Hevea brasiliensis] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); PF02892.14 BED zinc finger TRINITY_DN21167_c0_g2_i1 9.092708747 2.184627732 16.00078976 7.324263777 2.872683749 0.002263324 0.010697527 Up 0 1.397775 0 3.326192 2.034203 2.756072 XP_016476652.1 PREDICTED: uncharacterized protein LOC107798197 [Nicotiana tabacum] -- -- -- -- -- -- -- -- KOG0987 DNA helicase PIF1/RRM3 [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " L COG0507 exodeoxyribonuclease v alpha -- PF05970.13 PIF1-like helicase TRINITY_DN2116_c0_g1_i1 14.98185428 6.745431814 23.21827674 3.44207419 1.783278193 0.015179461 0.053894506 Up 0 1.454177 1.929465 2.811269 2.255459 4.432452 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21173_c0_g1_i2 121.2928181 241.8140596 0.771576693 0.003190785 -8.291872847 3.38E-71 5.90E-69 Down 4.875599 4.043219 4.657605 0 0 0.04162875 XP_022895939.1 probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2 [Olea europaea var. sylvestris] Q1MX30|XA21_ORYSI Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: positive regulation of defense response (GO:0031349);|Biological Process: protein autophosphorylation (GO:0046777);|Biological Process: positive regulation of defense response to bacterium (GO:1900426); "PF13855.5,PF00069.24,PF12799.6,PF07714.16,PF00560.32,PF08263.11" Leucine rich repeat|Protein kinase domain|Leucine Rich repeats (2 copies)|Protein tyrosine kinase|Leucine Rich Repeat|Leucine rich repeat N-terminal domain TRINITY_DN21173_c0_g2_i1 7.904794564 15.80958913 0 0 #NAME? 1.44E-05 0.00011339 Down 2.934859 2.271962 3.113799 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21181_c0_g12_i1 42.37417407 12.38124428 72.36710386 5.844897509 2.547177727 2.29E-09 3.12E-08 Up 0.9341508 0.4373386 0.8630779 3.319213 3.022387 4.274913 OMO77921.1 Alternative oxidase [Corchorus olitorius] O22049|AOX2_ARATH "Ubiquinol oxidase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=AOX2 PE=1 SV=2" pper:PRUPE_ppa008213mg K17893 "AOX1, AOX2" ubiquinol oxidase -- -- -- -- -- -- -- S ENOG410YFEH alternative oxidase Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Molecular Function: alternative oxidase activity (GO:0009916);|Biological Process: alternative respiration (GO:0010230);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872);|Cellular Component: respiratory chain (GO:0070469);|Molecular Function: ubiquinol:oxygen oxidoreductase activity (GO:0102721); -- -- TRINITY_DN21181_c0_g13_i1 46.44816682 69.2305905 23.66574315 0.341839395 -1.548609428 5.75E-05 0.000401696 Down 2.365223 2.633772 3.068966 0.9823342 0.7004584 0.4981759 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21181_c0_g2_i2 12.78043832 21.9068806 3.653996048 0.16679673 -2.58383709 0.005488076 0.022951928 Down 0.7191968 2.475859 1.916105 0.4007665 0.24246 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21184_c0_g1_i1 2647.686464 1381.856035 3913.516892 2.832072801 1.501858352 2.36E-95 5.70E-93 Up 92.88555 90.63888 80.32467 200.7313 206.4194 195.5523 XP_009781180.1 PREDICTED: aquaporin TIP2-1-like [Nicotiana sylvestris] Q41951|TIP21_ARATH Aquaporin TIP2-1 OS=Arabidopsis thaliana OX=3702 GN=TIP2-1 PE=1 SV=2 rcu:8273814 K09873 TIP aquaporin TIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Cellular Component: protein storage vacuole (GO:0000326);|Cellular Component: cell wall (GO:0005618);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: water transport (GO:0006833);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plant-type vacuole membrane (GO:0009705);|Cellular Component: chloroplast envelope (GO:0009941);|Molecular Function: methylammonium transmembrane transporter activity (GO:0015200);|Molecular Function: water channel activity (GO:0015250);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: identical protein binding (GO:0042802);|Cellular Component: central vacuole (GO:0042807); PF00230.19 Major intrinsic protein TRINITY_DN21184_c0_g3_i1 24.78970774 45.10427919 4.47513628 0.099217555 -3.333260791 2.72E-08 3.25E-07 Down 3.578505 3.270309 4.870605 0.1194558 0.3520374 0.3867182 ANV20566.1 TIP2;2 [Cenchrus americanus] Q5Z6F0|TIP22_ORYSJ Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=TIP2-2 PE=2 SV=1 sbi:SORBI_10g019360 K09873 TIP aquaporin TIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Cellular Component: vacuolar membrane (GO:0005774);|Molecular Function: water channel activity (GO:0015250);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN21187_c0_g2_i1 15.26524511 25.04949615 5.480994072 0.21880656 -2.192272105 0.002702228 0.012494878 Down 4.778283 4.314372 2.836329 1.235311 0.7652005 5.33E-41 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21192_c0_g2_i1 14.85527551 22.21940798 7.491143037 0.337144133 -1.568562603 0.024733537 0.080499709 Down 2.312206 3.022434 2.230587 1.086433 0.1188853 0.9137257 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21193_c0_g1_i1 15.47243477 30.94486955 0 0 #NAME? 4.55E-08 5.26E-07 Down 5.292059 2.855196 2.274253 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21193_c0_g2_i1 15.81112286 28.66670971 2.955536004 0.103099938 -3.277884625 1.82E-05 0.000140796 Down 4.38207 3.51413 3.56525 0.2532338 0.5037278 0.2581475 XP_024924570.1 receptor-like serine/threonine-protein kinase At3g01300 isoform X2 [Ziziphus jujuba] Q9LFP7|PIX7_ARATH Probable serine/threonine-protein kinase PIX7 OS=Arabidopsis thaliana OX=3702 GN=PIX7 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN21198_c0_g1_i6 55.23888481 76.09080068 34.38696894 0.451920188 -1.145860089 0.000933031 0.004907657 Down 4.112618 5.01152 4.66188 1.900457 0.9993334 2.127141 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21198_c0_g2_i5 36.50000718 60.22560002 12.77441434 0.212109374 -2.237119712 7.03E-07 6.91E-06 Down 6.585335 6.413738 7.257401 1.133053 0.558215 1.769533 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21198_c0_g5_i1 12.59735821 25.19471642 0 0 #NAME? 7.40E-08 8.31E-07 Down 4.694951 1.712668 3.555731 2.69E-28 6.60E-14 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21199_c0_g1_i4 94.12969614 148.4624479 39.79694436 0.268060677 -1.899368493 8.90E-12 1.58E-10 Down 5.21351 5.452149 5.319217 1.135826 1.109886 1.215782 PIN01066.1 "Beta, beta-carotene 15,15'-dioxygenase [Handroanthus impetiginosus]" O49675|CCD4_ARATH "Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCD4 PE=1 SV=1" sind:105161870 K09840 NCED 9-cis-epoxycarotenoid dioxygenase ko00906 Carotenoid biosynthesis KOG1285 "Beta, beta-carotene 15,15'-dioxygenase and related enzymes" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG3670 dioxygenase Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: plastoglobule (GO:0010287);|Molecular Function: carotenoid dioxygenase activity (GO:0010436);|Biological Process: carotene catabolic process (GO:0016121);|Molecular Function: 9-cis-epoxycarotenoid dioxygenase activity (GO:0045549);|Molecular Function: metal ion binding (GO:0046872); PF03055.14 Retinal pigment epithelial membrane protein TRINITY_DN2119_c0_g1_i2 9.488625971 18.97725194 0 0 #NAME? 1.70E-06 1.57E-05 Down 3.406321 2.714243 2.163077 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21202_c0_g1_i1 212.1516613 94.72975975 329.5735628 3.479092142 1.798710889 1.48E-22 5.62E-21 Up 6.564528 7.431064 5.044272 17.18506 18.0918 18.18329 XP_011090316.1 probable CCR4-associated factor 1 homolog 11 [Sesamum indicum] Q9FMS6|CAF1K_ARATH Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana OX=3702 GN=CAF1-11 PE=2 SV=1 sind:105171022 K12581 "CNOT7_8, CAF1, POP2" CCR4-NOT transcription complex subunit 7/8 ko03018 RNA degradation KOG0304 mRNA deadenylase subunit [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification K COG5228 "Ccr4-not transcription complex, subunit" Biological Process: nuclear-transcribed mRNA poly(A) tail shortening (GO:0000289);|Cellular Component: P-body (GO:0000932);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: poly(A)-specific ribonuclease activity (GO:0004535);|Cellular Component: nucleus (GO:0005634);|Molecular Function: 3'-5' exonuclease activity (GO:0008408);|Biological Process: negative regulation of translation (GO:0017148);|Cellular Component: CCR4-NOT core complex (GO:0030015);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay (GO:0043928);|Molecular Function: metal ion binding (GO:0046872); PF04857.19 CAF1 family ribonuclease TRINITY_DN21223_c0_g1_i2 461.3942173 300.3895676 622.398867 2.071972312 1.051004724 2.36E-16 6.03E-15 Up 9.439314 10.22536 9.455104 17.0394 16.29988 15.30049 XP_011085432.1 "2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Sesamum indicum]" Q42908|PMGI_MESCR "2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mesembryanthemum crystallinum OX=3544 GN=PGM1 PE=2 SV=1" sind:105167422 K15633 gpmI "2,3-bisphosphoglycerate-independent phosphoglycerate mutase" ko00260|ko00010 "Glycine, serine and threonine metabolism|Glycolysis / Gluconeogenesis" KOG4513 Phosphoglycerate mutase [G] METABOLISM Carbohydrate transport and metabolism G COG0696 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (By similarity) Molecular Function: phosphoglycerate mutase activity (GO:0004619);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: glucose catabolic process (GO:0006007);|Biological Process: glycolytic process (GO:0006096);|Molecular Function: manganese ion binding (GO:0030145); "PF01676.17,PF06415.12" Metalloenzyme superfamily|BPG-independent PGAM N-terminus (iPGM_N) TRINITY_DN21224_c0_g1_i31 62.24803789 98.81808566 25.67799011 0.259851119 -1.944242825 9.26E-09 1.17E-07 Down 4.975552 4.811189 6.264152 0.8408926 1.211225 1.285349 XP_011083199.1 "mannan endo-1,4-beta-mannosidase 7 [Sesamum indicum]" Q9FJZ3|MAN7_ARATH "Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis thaliana OX=3702 GN=MAN7 PE=2 SV=1" sind:105165771 K19355 MAN "mannan endo-1,4-beta-mannosidase" ko00051 Fructose and mannose metabolism -- -- -- -- -- G COG3934 "Mannan endo-1,4-beta-mannosidase" "Cellular Component: extracellular region (GO:0005576);|Biological Process: plant-type cell wall loosening (GO:0009828);|Biological Process: seed germination (GO:0009845);|Biological Process: fruit dehiscence (GO:0010047);|Molecular Function: mannan endo-1,4-beta-mannosidase activity (GO:0016985);|Biological Process: mannan catabolic process (GO:0046355);|Cellular Component: cell periphery (GO:0071944);|Biological Process: fruit valve development (GO:1990059);" -- -- TRINITY_DN21230_c0_g1_i1 236.8068501 316.680182 156.9335181 0.49555838 -1.012873067 5.32E-09 6.96E-08 Down 17.80251 14.71772 15.63987 6.730932 5.827666 6.693331 XP_011074698.1 GDSL esterase/lipase EXL3 [Sesamum indicum] Q94CH6|EXL3_ARATH GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana OX=3702 GN=EXL3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG3240 GDSL esterase lipase Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: lipase activity (GO:0016298); PF00657.21 GDSL-like Lipase/Acylhydrolase TRINITY_DN21231_c0_g2_i1 36.50453562 52.96076583 20.04830542 0.378550142 -1.401443686 0.00964664 0.036968334 Down 7.194052 5.928458 2.99572 1.844397 1.543195 1.541115 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21234_c0_g1_i1 22.23707739 34.09813507 10.37601971 0.304298745 -1.716439711 0.002884397 0.013218969 Down 3.891604 5.949599 3.635163 1.462321 0.9598868 0.8635011 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21234_c1_g1_i1 40.77221326 22.06914324 59.47528328 2.694952071 1.430259615 0.000519252 0.002921471 Up 0.7895676 0.7679985 0.9543237 2.002372 1.602237 1.822311 XP_020554265.1 berberine bridge enzyme-like 18 [Sesamum indicum] Q8GTB6|THCAS_CANSA Tetrahydrocannabinolic acid synthase OS=Cannabis sativa OX=3483 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: apoplast (GO:0048046);|Molecular Function: FAD binding (GO:0071949);|Molecular Function: Delta9-tetrahydrocannabinolate synthase activity (GO:0102778); "PF01565.22,PF08031.11" FAD binding domain|Berberine and berberine like TRINITY_DN21234_c1_g3_i1 19.01922611 36.95174652 1.086705707 0.029408778 -5.087609356 1.17E-09 1.65E-08 Down 2.468841 2.873913 2.462828 0 0.1566349 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21234_c2_g5_i1 34.58517264 15.78718694 53.38315833 3.381423082 1.757630537 7.94E-05 0.000538854 Up 1.876332 2.692643 1.885867 5.227505 6.789871 5.289329 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21236_c0_g2_i1 50.52913982 22.73388826 78.32439139 3.445270361 1.7846172 1.72E-06 1.59E-05 Up 1.764498 1.533307 1.926136 5.520399 4.485287 4.511151 XP_011077152.1 transcription factor HBP-1b(c38)-like [Sesamum indicum] Q39140|TGA6_ARATH Transcription factor TGA6 OS=Arabidopsis thaliana OX=3702 GN=TGA6 PE=1 SV=2 sind:105161226 K14431 TGA transcription factor TGA ko04075 Plant hormone signal transduction -- -- -- -- -- K ENOG410YG7S Transcription factor "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: transcription, DNA-templated (GO:0006351);|Molecular Function: hydrolase activity (GO:0016787);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: metal ion binding (GO:0046872);" -- -- TRINITY_DN21239_c0_g2_i1 110.5132129 163.4463425 57.58008324 0.352287377 -1.505175314 3.21E-09 4.30E-08 Down 13.59836 11.72124 11.18959 3.446912 3.410527 3.487472 KDP44711.1 hypothetical protein JCGZ_01211 [Jatropha curcas] Q948P6|FRI3_SOYBN "Ferritin-3, chloroplastic OS=Glycine max OX=3847 PE=2 SV=1" -- -- -- -- -- -- KOG2332 Ferritin [P] METABOLISM Inorganic ion transport and metabolism P COG1528 "Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis (By similarity)" Biological Process: response to reactive oxygen species (GO:0000302);|Molecular Function: ferroxidase activity (GO:0004322);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: iron ion transport (GO:0006826);|Biological Process: intracellular sequestering of iron ion (GO:0006880);|Molecular Function: ferrous iron binding (GO:0008198);|Molecular Function: ferric iron binding (GO:0008199);|Biological Process: response to cold (GO:0009409);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: thylakoid (GO:0009579);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to cytokinin (GO:0009735);|Biological Process: flower development (GO:0009908);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: response to iron ion (GO:0010039);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: membrane (GO:0016020);|Biological Process: response to hydrogen peroxide (GO:0042542);|Molecular Function: identical protein binding (GO:0042802);|Biological Process: leaf development (GO:0048366); PF00210.23 Ferritin-like domain TRINITY_DN21246_c0_g3_i1 64.86401176 117.2114434 12.51658012 0.106786332 -3.22720109 1.75E-18 5.20E-17 Down 8.878813 7.330759 7.242144 0.2261536 0.3277508 1.434589 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21249_c0_g4_i7 298.2565979 134.3242318 462.1889639 3.440845763 1.782763224 4.90E-27 2.40E-25 Up 7.784786 4.125885 6.98743 18.57626 15.86378 18.08121 EYU40385.1 hypothetical protein MIMGU_mgv1a007613mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21257_c0_g2_i1 20.5367646 30.22559928 10.84792992 0.358898754 -1.478351181 0.012095174 0.04460808 Down 1.880982 2.419125 1.697497 0.3853059 0.5171555 0.7919797 XP_011091018.1 serine/threonine-protein kinase Aurora-3 isoform X1 [Sesamum indicum] O64629|AUR3_ARATH Serine/threonine-protein kinase Aurora-3 OS=Arabidopsis thaliana OX=3702 GN=AUR3 PE=2 SV=1 sind:105171560 K08850 AURKX "aurora kinase, other" -- -- KOG0580 Serine/threonine protein kinase [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " T ENOG410XNRB serine threonine-protein kinase "Biological Process: microtubule cytoskeleton organization (GO:0000226);|Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: chromosome, centromeric region (GO:0000775);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: spindle (GO:0005819);|Biological Process: chromosome segregation (GO:0007059);|Biological Process: histone phosphorylation (GO:0016572);|Biological Process: regulation of cytokinesis (GO:0032465);|Molecular Function: histone kinase activity (H3-S10 specific) (GO:0035175);|Biological Process: histone H3-S10 phosphorylation (GO:0043987);|Biological Process: histone H3-S28 phosphorylation (GO:0043988);|Molecular Function: histone kinase activity (H3-S28 specific) (GO:0044022);|Cellular Component: perinuclear region of cytoplasm (GO:0048471);" "PF00069.24,PF07714.16,PF14531.5" Protein kinase domain|Protein tyrosine kinase|Kinase-like TRINITY_DN21262_c0_g1_i4 49.2036543 27.45383737 70.95347123 2.584464615 1.36986545 0.000295473 0.001765955 Up 1.145054 0.9691346 1.571796 2.640494 2.505111 2.561989 XP_011069785.1 alcohol dehydrogenase 3 [Sesamum indicum] P14673|ADH1_SOLTU Alcohol dehydrogenase 1 OS=Solanum tuberosum OX=4113 GN=ADH1 PE=1 SV=1 sind:105155589 K18857 ADH1 alcohol dehydrogenase class-P ko00350|ko00592|ko00071|ko00010 Tyrosine metabolism|alpha-Linolenic acid metabolism|Fatty acid degradation|Glycolysis / Gluconeogenesis KOG0022 "Alcohol dehydrogenase, class III" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " C COG1062 alcohol dehydrogenase Molecular Function: alcohol dehydrogenase (NAD) activity (GO:0004022);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: zinc ion binding (GO:0008270); "PF00107.25,PF08240.11,PF16912.4" Zinc-binding dehydrogenase|Alcohol dehydrogenase GroES-like domain|Glucose dehydrogenase C-terminus TRINITY_DN21269_c0_g1_i3 288.0046152 128.2139974 447.7952329 3.492561203 1.804285397 1.50E-28 7.91E-27 Up 2.652268 3.520243 3.341024 8.826624 9.240698 8.780026 XP_011095612.1 probable galactinol--sucrose galactosyltransferase 1 [Sesamum indicum] Q84VX0|RFS1_ARATH Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RFS1 PE=2 SV=1 sind:105175015 K06617 E2.4.1.82 raffinose synthase ko00052 Galactose metabolism -- -- -- -- -- S ENOG410YBU9 raffinose synthase Biological Process: raffinose family oligosaccharide biosynthetic process (GO:0010325);|Molecular Function: galactinol-sucrose galactosyltransferase activity (GO:0047274); PF05691.11 Raffinose synthase or seed imbibition protein Sip1 TRINITY_DN21271_c0_g1_i1 9.128228848 18.2564577 0 0 #NAME? 2.15E-06 1.95E-05 Down 2.843118 2.66289 4.597241 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21271_c1_g2_i1 178.5465572 352.3211282 4.771986131 0.013544422 -6.206157334 1.47E-90 3.42E-88 Down 14.49859 14.78379 16.32895 0.1169786 0.3077418 0.07290622 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21271_c1_g3_i1 5.474258735 10.58628223 0.362235236 0.034217417 -4.869125325 0.021614913 0.072075645 Down 0 2.177911 2.765614 0 0.179988 4.44E-31 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21271_c1_g4_i2 32.34769958 59.38330081 5.312098358 0.089454414 -3.482703523 9.02E-07 8.73E-06 Down 6.286453 3.041647 3.984316 0.08386451 0.1986729 0.6950523 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21271_c2_g1_i4 80.78190799 127.5776093 33.98620673 0.266396329 -1.908353895 2.94E-10 4.44E-09 Down 4.854907 4.182701 4.10395 0.8218297 1.286528 0.7287149 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21271_c2_g2_i1 5.821997813 10.10084224 1.543153387 0.152774724 -2.710522219 0.030325053 0.095039016 Down 2.100675 0.912582 1.051862 0 0 0.4932894 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21271_c2_g4_i1 2.864234584 5.728469168 0 0 #NAME? 0.022181641 0.073678562 Down 1.044253 0.8005027 1.282547 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21283_c0_g2_i1 20.55999915 3.327928949 37.79206934 11.35603251 3.50538698 7.26E-08 8.16E-07 Up 0.1189486 0.4028186 0.08869927 1.773633 1.958407 1.555685 XP_015074778.1 PREDICTED: myosin heavy chain kinase B-like [Solanum pennellii] O48716|JGB_ARATH Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1 -- -- -- -- -- -- KOG4155 FOG: WD40 repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410XP1Z wD repeat domain Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: pollen germination (GO:0009846); PF00400.31 "WD domain, G-beta repeat" TRINITY_DN21286_c1_g2_i1 25.04231491 50.08462983 0 0 #NAME? 2.58E-16 6.58E-15 Down 6.63797 6.017697 6.553337 0 0 3.07E-59 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21288_c1_g2_i9 581.9862629 346.2820933 817.6904325 2.361341947 1.239606974 1.30E-25 5.85E-24 Up 13.80677 15.28012 15.82995 27.6272 27.84146 30.11652 XP_011079440.1 uncharacterized protein LOC105162958 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z9KI NA -- -- -- TRINITY_DN21288_c1_g4_i1 42.59105582 64.37277743 20.80933422 0.323262954 -1.629219909 5.75E-05 0.000401696 Down 4.019141 3.556463 4.125927 0.9990682 0.991906 1.020467 XP_022752588.1 peptidyl-prolyl cis-trans isomerase CYP71 isoform X3 [Durio zibethinus] Q8W4D0|CPY71_ARATH Peptidyl-prolyl cis-trans isomerase CYP71 OS=Arabidopsis thaliana OX=3702 GN=CYP71 PE=1 SV=1 gmx:100792207 K12736 PPWD1 peptidylprolyl isomerase domain and WD repeat-containing protein 1 -- -- KOG0882 Cyclophilin-related peptidyl-prolyl cis-trans isomerase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XQB4 peptidylprolyl isomerase domain and WD Biological Process: protein peptidyl-prolyl isomerization (GO:0000413);|Molecular Function: chromatin binding (GO:0003682);|Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of flower development (GO:0009909);|Biological Process: meristem structural organization (GO:0009933);|Biological Process: regulation of root meristem growth (GO:0010082);|Biological Process: leaf vascular tissue pattern formation (GO:0010305);|Biological Process: leaf formation (GO:0010338);|Biological Process: leaf shaping (GO:0010358);|Biological Process: regulation of histone methylation (GO:0031060);|Molecular Function: histone binding (GO:0042393);|Biological Process: carpel development (GO:0048440);|Biological Process: stamen development (GO:0048443);|Biological Process: sepal formation (GO:0048453); -- -- TRINITY_DN21288_c1_g6_i1 5.242829167 9.38313078 1.102527553 0.117501032 -3.089254663 0.022807313 0.075387195 Down 0.4649093 2.668513 2.944748 0.5742419 4.17E-07 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21298_c0_g2_i1 21.66958199 34.11277805 9.226385932 0.270467152 -1.886474703 0.001221545 0.006237245 Down 1.681769 3.219964 2.451747 0.6070557 0.6057276 0.3117128 PIN12057.1 hypothetical protein CDL12_15346 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21299_c0_g1_i2 31.24187503 54.66447279 7.819277264 0.1430413 -2.805496339 1.09E-06 1.04E-05 Down 7.150356 3.749637 4.698508 0.7659812 0.3821748 0.6659564 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21301_c3_g2_i1 158.2732384 312.871385 3.675091843 0.011746334 -6.411645602 6.32E-82 1.32E-79 Down 21.16938 20.61454 17.92453 0.5746591 2.52E-47 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21301_c3_g3_i1 42.29006214 74.45666483 10.12345945 0.13596445 -2.878698614 1.79E-05 0.000138062 Down 7.858209 11.808 5.188443 0.6870802 0.7050526 1.393258 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21301_c3_g4_i1 126.1466652 202.9264033 49.36692705 0.243275031 -2.039339841 3.64E-05 0.000265218 Down 33.9046 23.97567 17.04828 4.177653 5.726056 4.85869 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21303_c1_g2_i1 26.90630803 39.68101591 14.13160015 0.356129999 -1.489524128 0.003446924 0.015394156 Down 5.321929 2.992929 4.539509 0.7045277 1.644376 1.454893 KEH44451.1 "thioredoxin superfamily protein, putative [Medicago truncatula]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YAAY NA -- -- -- TRINITY_DN21303_c1_g3_i1 31.47165618 49.90087523 13.04243713 0.261366901 -1.935851641 0.00504502 0.021354606 Down 14.64389 5.774727 8.271964 1.777124 1.816229 2.396742 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21308_c0_g3_i1 39.28763837 21.40171833 57.17355842 2.671447103 1.417621451 0.000559938 0.003124432 Up 2.22241 3.048788 2.078505 5.82236 4.99331 4.938697 XP_012847953.1 PREDICTED: cysteine proteinase inhibitor B-like [Erythranthe guttata] Q8L5T9|CYT2_ARATH Cysteine proteinase inhibitor 2 OS=Arabidopsis thaliana OX=3702 GN=CYS2 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YYG2 Cysteine proteinase inhibitor Molecular Function: cysteine-type endopeptidase inhibitor activity (GO:0004869);|Cellular Component: extracellular region (GO:0005576);|Biological Process: defense response (GO:0006952); "PF16845.4,PF00031.20" Aspartic acid proteinase inhibitor|Cystatin domain TRINITY_DN21308_c1_g1_i3 42.20073076 83.24409648 1.15736504 0.013903269 -6.168432086 2.72E-23 1.08E-21 Down 5.442546 6.908654 7.546231 0 0 0.2411613 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21308_c1_g2_i5 303.1781451 605.6212718 0.735018369 0.00121366 -9.686419859 1.82E-126 6.16E-124 Down 22.70467 26.59849 21.16317 0.05485711 0 0 XP_020548620.1 VQ motif-containing protein 9-like isoform X1 [Sesamum indicum] Q9M9F0|VQ9_ARATH VQ motif-containing protein 9 OS=Arabidopsis thaliana OX=3702 GN=VQ9 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z611 VQ motif Cellular Component: nucleus (GO:0005634);|Biological Process: cellular sodium ion homeostasis (GO:0006883);|Biological Process: cellular potassium ion homeostasis (GO:0030007);|Biological Process: negative regulation of DNA-binding transcription factor activity (GO:0043433);|Biological Process: negative regulation of response to salt stress (GO:1901001); -- -- TRINITY_DN21308_c2_g1_i1 12.52788733 21.79565754 3.26011712 0.149576452 -2.741045029 0.018354575 0.063123661 Down 4.696873 1.527419 7.460179 0 1.71696 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21319_c2_g1_i1 9.433557581 18.86711516 0 0 #NAME? 1.39E-06 1.30E-05 Down 2.667705 3.067421 4.481693 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21320_c0_g1_i5 66.52750852 36.93202424 96.1229928 2.60270036 1.380009229 1.59E-05 0.000124149 Up 1.506937 2.096222 1.908824 4.101059 3.85253 3.625627 XP_011089045.1 "UV-B-induced protein At3g17800, chloroplastic [Sesamum indicum]" Q9LVJ0|UVB31_ARATH "UV-B-induced protein At3g17800, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g17800 PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410YC8B Protein of unknown function (DUF760) Cellular Component: chloroplast (GO:0009507);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to ozone (GO:0010193);|Biological Process: response to UV-B (GO:0010224); PF05542.10 Protein of unknown function (DUF760) TRINITY_DN21322_c1_g1_i1 42.2092133 79.91692057 4.501506024 0.056327321 -4.150021338 2.06E-06 1.88E-05 Down 7.592848 4.260103 11.18208 0.6023152 9.90E-41 0.4392878 XP_011079679.1 WD repeat-containing protein 89 homolog [Sesamum indicum] Q944S2|GTS1_ARATH WD repeat-containing protein GTS1 OS=Arabidopsis thaliana OX=3702 GN=GTS1 PE=2 SV=1 -- -- -- -- -- -- KOG1188 WD40 repeat protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZUMD WD repeat domain 89 Biological Process: multicellular organism development (GO:0007275);|Biological Process: regulation of seed germination (GO:0010029);|Biological Process: regulation of growth (GO:0040008); -- -- TRINITY_DN21322_c1_g3_i1 28.35197307 43.89140686 12.81253928 0.291914527 -1.776382086 0.009260391 0.035759841 Down 4.14506 4.102753 8.083376 2.335918 1.389739 0.1685908 XP_011079679.1 WD repeat-containing protein 89 homolog [Sesamum indicum] Q944S2|GTS1_ARATH WD repeat-containing protein GTS1 OS=Arabidopsis thaliana OX=3702 GN=GTS1 PE=2 SV=1 -- -- -- -- -- -- KOG1188 WD40 repeat protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZUMD WD repeat domain 89 Biological Process: multicellular organism development (GO:0007275);|Biological Process: regulation of seed germination (GO:0010029);|Biological Process: regulation of growth (GO:0040008); -- -- TRINITY_DN21324_c2_g1_i1 49.77126003 74.96142423 24.58109582 0.327916606 -1.608599131 2.05E-05 0.000156798 Down 8.11603 12.48629 8.31417 2.802461 1.99973 2.776135 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21328_c0_g1_i4 320.7709658 610.8666128 30.67531877 0.050216067 -4.31570715 1.82E-112 5.47E-110 Down 15.48522 15.91644 14.05596 0.6131632 0.4173244 0.8162279 XP_024447864.1 zinc finger BED domain-containing protein RICESLEEPER 2 [Populus trichocarpa] P08770|TRA1_MAIZE Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG410ZT99 Pfam:hATC Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: transposition (GO:0032196);|Molecular Function: protein dimerization activity (GO:0046983); "PF02892.14,PF14372.5,PF05699.13" BED zinc finger|Domain of unknown function (DUF4413)|hAT family C-terminal dimerisation region TRINITY_DN21328_c0_g2_i1 6.481957916 0.651223126 12.31269271 18.90702621 4.240850562 0.00102026 0.005314132 Up 0.1867114 0 0 1.13331 1.142781 1.585059 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21329_c0_g1_i1 598.1872976 838.6786042 357.695991 0.426499483 -1.229384103 9.78E-26 4.44E-24 Down 24.6831 22.92417 24.02106 8.9571 8.098098 7.581499 OMO64778.1 hypothetical protein COLO4_31816 [Corchorus olitorius] Q9P6Q1|PLPHP_SCHPO Pyridoxal phosphate homeostasis protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC644.09 PE=3 SV=1 sind:105168604 K06997 "yggS, PROSC" PLP dependent protein -- -- KOG3157 Proline synthetase co-transcribed protein [R] POORLY CHARACTERIZED General function prediction only S COG0325 alanine racemase domain protein Cellular Component: intracellular (GO:0005622);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: alanine metabolic process (GO:0006522);|Molecular Function: pyridoxal phosphate binding (GO:0030170);|Biological Process: protein maturation (GO:0051604); PF01168.19 "Alanine racemase, N-terminal domain" TRINITY_DN2132_c0_g1_i1 13.32462405 26.28701287 0.362235236 0.013780008 -6.181279512 6.89E-08 7.77E-07 Down 1.829552 1.830832 1.631478 0 0.05986801 0 ABM85252.1 "ribosomal protein SA, partial [synthetic construct]" B6K1S2|RSSA2_SCHJY 40S ribosomal protein S0-B OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) OX=402676 GN=rps0b PE=3 SV=1 obr:102716664 K02998 "RP-SAe, RPSA" small subunit ribosomal protein SAe ko03010 Ribosome KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0052 30S ribosomal protein S2 Biological Process: ribosomal small subunit assembly (GO:0000028);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); "PF16122.4,PF00318.19" 40S ribosomal protein SA C-terminus|Ribosomal protein S2 TRINITY_DN21330_c0_g1_i1 25.75048952 51.50097904 0 0 #NAME? 1.00E-16 2.65E-15 Down 8.565627 14.24129 10.12637 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21337_c1_g2_i2 44.80951185 66.99851331 22.6205104 0.33762705 -1.566497601 7.12E-05 0.00048714 Down 4.188494 3.322506 4.112886 0.9907098 1.195781 0.9744583 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21338_c0_g3_i1 12.94296607 20.70460455 5.181327588 0.250250014 -1.998557943 0.028507793 0.090486978 Down 6.288161 3.058989 1.996827 0.5594007 1.14557 0.6214933 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21341_c0_g1_i2 34.45672222 53.73661153 15.1768329 0.282430032 -1.824034592 7.03E-05 0.000481628 Down 2.814411 3.351727 2.957126 0.8397438 0.7081532 0.526285 XP_011100411.1 mitogen-activated protein kinase kinase kinase ANP1 [Sesamum indicum] Q9ZVP5|M3K18_ARATH Mitogen-activated protein kinase kinase kinase 18 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK18 PE=1 SV=1 -- -- -- -- -- -- KOG0198 MEKK and related serine/threonine protein kinases [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XQGS mitogen-activated protein kinase kinase kinase Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: MAP kinase kinase kinase activity (GO:0004709);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);|Biological Process: signal transduction by protein phosphorylation (GO:0023014);|Biological Process: stress-activated protein kinase signaling cascade (GO:0031098);|Biological Process: activation of protein kinase activity (GO:0032147);|Biological Process: protein autophosphorylation (GO:0046777);|Biological Process: positive regulation of leaf senescence (GO:1900057);|Biological Process: negative regulation of stomatal opening (GO:1902457);|Biological Process: regulation of stomatal complex development (GO:2000038); "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN21343_c0_g1_i4 72.40849398 99.60689222 45.21009573 0.453885215 -1.139600599 0.000217018 0.001338467 Down 4.320325 4.486842 4.088668 1.886159 1.501122 1.309959 XP_011081357.1 "beta-1,6-galactosyltransferase GALT31A [Sesamum indicum]" Q9MAP8|B3GT6_ARATH "Beta-1,6-galactosyltransferase GALT31A OS=Arabidopsis thaliana OX=3702 GN=GALT31A PE=1 SV=1" -- -- -- -- -- -- KOG2288 Galactosyltransferases [G] METABOLISM Carbohydrate transport and metabolism S ENOG410XV5H "Beta-1,3-galactosyltransferase" Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: Golgi apparatus (GO:0005794);|Biological Process: protein glycosylation (GO:0006486);|Molecular Function: galactosyltransferase activity (GO:0008378);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Cellular Component: integral component of membrane (GO:0016021); "PF01762.20,PF13334.5,PF02434.15" Galactosyltransferase|Domain of unknown function (DUF4094)|Fringe-like TRINITY_DN21343_c0_g2_i1 8.09076452 16.18152904 0 0 #NAME? 1.04E-05 8.36E-05 Down 2.141986 2.779846 3.3254 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21344_c0_g1_i2 28.18518503 18.18196447 38.18840559 2.100345408 1.070626603 0.025558022 0.08269104 Up 4.089738 1.956602 2.706523 5.239568 5.198882 4.371038 EYU41526.1 "hypothetical protein MIMGU_mgv1a020146mg, partial [Erythranthe guttata]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZEWH NA -- -- -- TRINITY_DN21344_c0_g2_i2 106.5841751 200.6948523 12.47349784 0.062151558 -4.008065623 7.68E-27 3.71E-25 Down 26.12806 20.59073 18.1812 1.115012 1.730703 0.358819 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21345_c0_g1_i2 1487.031414 676.9828223 2297.080006 3.393114168 1.762609973 3.11E-93 7.32E-91 Up 41.24862 40.03694 40.09284 110.023 108.1815 114.1566 XP_011078509.1 berberine bridge enzyme-like 18 [Sesamum indicum] A6P6V9|CBDAS_CANSA Cannabidiolic acid synthase OS=Cannabis sativa OX=3483 GN=CBDAS PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: apoplast (GO:0048046);|Molecular Function: FAD binding (GO:0071949);|Molecular Function: cannabidiolate synthase activity (GO:0102779); PF08031.11 Berberine and berberine like TRINITY_DN21348_c0_g4_i1 19.3201418 28.72880215 9.911481445 0.345001556 -1.535325226 0.017836282 0.061607239 Down 1.414541 2.842827 3.788998 0.5735398 1.330958 0.3957279 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21355_c0_g1_i1 596.3250319 839.6719401 352.9781237 0.420376229 -1.250247003 7.57E-27 3.66E-25 Down 54.99683 60.95975 64.86489 21.09241 20.78538 19.47284 XP_012858395.1 PREDICTED: probable aquaporin PIP1-5 [Erythranthe guttata] Q6EU94|PIP11_ORYSJ Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PIP1-1 PE=2 SV=1 mus:104000197 K09872 PIP aquaporin PIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Cellular Component: vacuole (GO:0005773);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to water deprivation (GO:0009414);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: water channel activity (GO:0015250);|Cellular Component: integral component of membrane (GO:0016021); PF00230.19 Major intrinsic protein TRINITY_DN21355_c0_g2_i1 17.03556306 34.07112612 0 0 #NAME? 2.83E-11 4.79E-10 Down 7.119588 4.229879 5.599166 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21356_c0_g1_i1 26.23060642 48.00153909 4.45967375 0.092906891 -3.428070586 5.74E-09 7.46E-08 Down 4.571381 4.186811 6.192436 0.7638792 0.1264896 0.2767974 XP_011092529.1 transcription factor bHLH113-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21356_c0_g2_i4 198.731881 302.4591186 95.0046434 0.314107387 -1.670670223 9.19E-11 1.47E-09 Down 35.14502 24.84094 35.15873 8.032549 8.370382 7.693049 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21358_c0_g2_i1 45.19622228 60.50416501 29.88827955 0.493987142 -1.017454605 0.009709054 0.037163595 Down 1.911563 1.939529 1.289966 0.8354579 0.3592466 0.8434347 PIN07100.1 hypothetical protein CDL12_20334 [Handroanthus impetiginosus] Q9M2A1|PP263_ARATH Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX=3702 GN=At3g42630 PE=2 SV=2 -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- PF13041.5 PPR repeat family TRINITY_DN21359_c0_g2_i1 94.34500903 6.067602618 182.6224154 30.09795251 4.911593442 1.97E-44 1.82E-42 Up 0.3280343 0.1790855 0.2839612 6.966592 5.71622 6.74714 XP_011082052.1 UDP-glycosyltransferase 74F2-like [Sesamum indicum] Q9SYK9|U74E2_ARATH UDP-glycosyltransferase 74E2 OS=Arabidopsis thaliana OX=3702 GN=UGT74E2 PE=1 SV=1 sind:105164919 K13691 SGT1 pathogen-inducible salicylic acid glucosyltransferase -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Biological Process: shoot system morphogenesis (GO:0010016);|Molecular Function: UDP-glucosyltransferase activity (GO:0035251);|Biological Process: cellular response to water deprivation (GO:0042631);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: indole-3-butyrate beta-glucosyltransferase activity (GO:0052638);|Biological Process: cellular response to hydrogen peroxide (GO:0070301);|Biological Process: cellular response to abscisic acid stimulus (GO:0071215);|Biological Process: cellular hyperosmotic salinity response (GO:0071475);|Biological Process: indolebutyric acid metabolic process (GO:0080024);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);|Biological Process: response to karrikin (GO:0080167); "PF00201.17,PF04101.15" UDP-glucoronosyl and UDP-glucosyl transferase|Glycosyltransferase family 28 C-terminal domain TRINITY_DN21359_c0_g3_i1 4.64061171 0 9.281223419 Inf Inf 0.000863967 0.004584227 Up 0 0 0 1.309197 1.784639 1.520069 XP_011082052.1 UDP-glycosyltransferase 74F2-like [Sesamum indicum] Q9SYK9|U74E2_ARATH UDP-glycosyltransferase 74E2 OS=Arabidopsis thaliana OX=3702 GN=UGT74E2 PE=1 SV=1 sind:105164919 K13691 SGT1 pathogen-inducible salicylic acid glucosyltransferase -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Biological Process: shoot system morphogenesis (GO:0010016);|Molecular Function: UDP-glucosyltransferase activity (GO:0035251);|Biological Process: cellular response to water deprivation (GO:0042631);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: indole-3-butyrate beta-glucosyltransferase activity (GO:0052638);|Biological Process: cellular response to hydrogen peroxide (GO:0070301);|Biological Process: cellular response to abscisic acid stimulus (GO:0071215);|Biological Process: cellular hyperosmotic salinity response (GO:0071475);|Biological Process: indolebutyric acid metabolic process (GO:0080024);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);|Biological Process: response to karrikin (GO:0080167); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN21361_c0_g3_i3 181.3907748 112.1738876 250.6076621 2.23409982 1.159693647 2.61E-09 3.54E-08 Up 7.390735 7.875335 7.64752 15.98251 13.37927 11.85175 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21369_c0_g2_i3 341.3390962 223.0390589 459.6391335 2.06080108 1.043205255 3.05E-08 3.63E-07 Up 8.494638 13.2208 10.34171 15.48877 19.92515 17.85735 XP_019238699.1 "PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Nicotiana attenuata]" P09094|G3PC_TOBAC "Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum OX=4097 GN=GAPC PE=2 SV=1" sind:105168372 K00134 "GAPDH, gapA" glyceraldehyde 3-phosphate dehydrogenase ko00710|ko00010 Carbon fixation in photosynthetic organisms|Glycolysis / Gluconeogenesis KOG0657 Glyceraldehyde 3-phosphate dehydrogenase [G] METABOLISM Carbohydrate transport and metabolism G COG0057 glyceraldehyde3phosphate dehydrogenase Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (GO:0004365);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: glucose metabolic process (GO:0006006);|Biological Process: glycolytic process (GO:0006096);|Molecular Function: NADP binding (GO:0050661);|Molecular Function: NAD binding (GO:0051287); "PF00044.23,PF02800.19" "Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain|Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain" TRINITY_DN2136_c0_g1_i1 9.172033756 17.61959704 0.724470471 0.041117312 -4.604110233 0.000108943 0.000716393 Down 4.061427 4.038221 1.555529 0 0.373783 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21371_c2_g3_i1 20.24324992 36.73583403 3.750665809 0.102098289 -3.291969402 9.34E-07 9.01E-06 Down 2.197462 3.395235 2.104142 0.1012725 0.201054 0.3135185 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21372_c0_g1_i1 69.02609969 40.12053044 97.93166895 2.440936545 1.287434791 0.014380785 0.05157925 Up 1.719426 2.339867 1.878621 4.676133 4.977186 2.009586 XP_011087842.1 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 [Sesamum indicum] Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=BAK1 PE=1 SV=2 sind:105169199 K13416 BAK1 brassinosteroid insensitive 1-associated receptor kinase 1 ko04626|ko04075 Plant-pathogen interaction|Plant hormone signal transduction KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG411233U receptor kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN21372_c0_g2_i1 12.95608819 5.488630515 20.42354587 3.721064082 1.895715236 0.009242565 0.035700116 Up 1.792183 0.7149898 0.5668864 3.067561 3.04014 2.866388 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21372_c0_g3_i2 74.32988631 37.52075205 111.1390206 2.962068042 1.566604781 2.04E-07 2.16E-06 Up 2.357049 1.063491 1.555675 4.206576 3.679938 4.029868 EYU35407.1 hypothetical protein MIMGU_mgv1a002996mg [Erythranthe guttata] Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=BAK1 PE=1 SV=2 sind:105172594 K13416 BAK1 brassinosteroid insensitive 1-associated receptor kinase 1 ko04626|ko04075 Plant-pathogen interaction|Plant hormone signal transduction KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG411233U receptor kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN21372_c0_g5_i1 78.1048243 42.1970179 114.0126307 2.70191204 1.433980709 1.25E-06 1.18E-05 Up 4.430369 4.0697 4.576532 8.227879 10.6236 9.699658 KZM90794.1 hypothetical protein DCAR_021841 [Daucus carota subsp. sativus] Q9XIC7|SERK2_ARATH Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=SERK2 PE=1 SV=1 gra:105782185 K13416 BAK1 brassinosteroid insensitive 1-associated receptor kinase 1 ko04626|ko04075 Plant-pathogen interaction|Plant hormone signal transduction -- -- -- -- -- T ENOG410ZNK7 Somatic embryogenesis receptor kinase -- -- -- TRINITY_DN21372_c0_g6_i1 18.23570488 9.748186903 26.72322286 2.741353149 1.454888192 0.016462329 0.057633388 Up 0.7371586 0.4765683 0.4633221 1.449144 1.17871 1.166591 XP_012838912.1 PREDICTED: somatic embryogenesis receptor kinase 2 [Erythranthe guttata] Q9XIC7|SERK2_ARATH Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=SERK2 PE=1 SV=1 cit:102577978 K13418 SERK1 somatic embryogenesis receptor kinase 1 -- -- -- -- -- -- -- T ENOG410ZNK7 Somatic embryogenesis receptor kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN21373_c2_g1_i3 248.7079685 85.47944845 411.9364886 4.819128996 2.268772419 8.99E-38 6.66E-36 Up 4.721241 4.442283 3.956456 17.4017 17.47009 16.08502 XP_020250940.1 "uncharacterized protein LOC109828329, partial [Asparagus officinalis]" -- -- -- -- -- -- -- -- KOG0987 DNA helicase PIF1/RRM3 [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " S ENOG410ZN6M NA -- -- -- TRINITY_DN21373_c3_g2_i1 6.076244531 0.984156182 11.16833288 11.34813059 3.504382753 0.008509189 0.033315302 Up 0 0 0.5506851 1.384606 1.709707 1.862751 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21377_c0_g2_i2 30753.61286 46073.81752 15433.4082 0.334971336 -1.577890448 2.98E-52 3.44E-50 Down 6526.297 6686.561 5858.893 1544.974 1579.833 2036.434 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21379_c0_g2_i1 43.25523013 19.48553182 67.02492843 3.439727949 1.782294466 9.96E-06 8.06E-05 Up 1.796704 1.048294 1.78973 4.632858 4.624325 3.518616 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21380_c0_g1_i2 22.53435092 37.21286626 7.855835588 0.211105362 -2.243964874 0.000113979 0.000746158 Down 4.836085 4.063679 4.313367 0.7390277 0.536822 0.9857464 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21380_c0_g3_i1 10.95216988 20.74697471 1.15736504 0.055784762 -4.163985104 2.75E-05 0.000205068 Down 1.901952 3.742302 4.506324 0.02188938 9.46E-11 0.5141976 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21388_c0_g1_i9 372.5512817 514.502769 230.5997943 0.448199326 -1.157787615 2.14E-08 2.59E-07 Down 29.81635 21.16245 26.17679 8.745532 9.171918 10.00574 KZV32383.1 CUGBP Elav-like family member 5-like [Dorcoceras hygrometricum] Q8GZ26|BRN2L_ARATH RNA-binding protein BRN2 OS=Arabidopsis thaliana OX=3702 GN=BRN2 PE=2 SV=1 mdm:103432486 K13207 "CUGBP, BRUNOL, CELF" CUG-BP- and ETR3-like factor -- -- KOG0144 RNA-binding protein CUGBP1/BRUNO (RRM superfamily) [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification S ENOG410XNTW "CUGBP, Elav-like family member" "Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA binding (GO:0003729);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: mRNA catabolic process (GO:0006402);|Biological Process: flower development (GO:0009908);|Biological Process: photoperiodism, flowering (GO:0048573);|Cellular Component: ribonucleoprotein complex (GO:1990904);|Biological Process: regulation of photoperiodism, flowering (GO:2000028);" "PF00076.21,PF16842.4,PF08675.10" "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)|Occluded RNA-recognition motif|RNA binding domain" TRINITY_DN21389_c0_g1_i2 17.99085283 35.2572352 0.724470471 0.020548136 -5.604848648 5.99E-10 8.74E-09 Down 2.730197 1.982079 3.77398 2.21E-28 0.1321979 4.05E-58 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21389_c0_g2_i1 5.584387413 11.16877483 0 0 #NAME? 0.000418413 0.002413037 Down 0.6728331 3.325347 2.158264 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21389_c0_g3_i1 14.9567548 29.91350961 0 0 #NAME? 6.02E-10 8.79E-09 Down 3.276588 4.122984 2.932122 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21391_c0_g1_i1 20.19968797 40.39937594 0 0 #NAME? 2.67E-13 5.40E-12 Down 2.821285 4.906693 3.957636 1.78E-87 0 4.09E-97 XP_024020247.1 uncharacterized protein LOC112091288 [Morus notabilis] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only Q COG2124 Cytochrome p450 Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN21391_c0_g2_i1 42.14500418 67.8640553 16.42595307 0.242042021 -2.046670562 8.67E-07 8.42E-06 Down 4.014892 5.281365 4.842803 1.304178 0.4383026 1.045305 CAN81099.1 hypothetical protein VITISV_017741 [Vitis vinifera] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF13976.5 GAG-pre-integrase domain TRINITY_DN21391_c0_g3_i7 102.5080226 171.2426645 33.77338075 0.19722527 -2.342083682 1.55E-17 4.31E-16 Down 3.575334 3.804197 3.829373 0.6448909 0.5809159 0.5514051 CAN81099.1 hypothetical protein VITISV_017741 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN21395_c0_g1_i4 122.4040648 48.29898578 196.5091439 4.068597729 2.024531645 1.31E-16 3.41E-15 Up 2.036893 1.68128 2.208007 6.790721 6.842757 5.831331 XP_011071160.1 E3 ubiquitin-protein ligase RGLG5 [Sesamum indicum] Q8LB88|RGLG5_ARATH E3 ubiquitin-protein ligase RGLG5 OS=Arabidopsis thaliana OX=3702 GN=RGLG5 PE=1 SV=1 sind:105156656 K16280 RGLG E3 ubiquitin-protein ligase RGLG -- -- KOG1327 Copine [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XPC8 copine family Cellular Component: plasma membrane (GO:0005886);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);|Molecular Function: transferase activity (GO:0016740);|Molecular Function: metal ion binding (GO:0046872); PF07002.15 Copine TRINITY_DN21396_c0_g1_i1 272.0272426 170.1357251 373.9187601 2.197767458 1.136038746 2.57E-12 4.80E-11 Up 6.129698 5.53508 5.955715 9.921582 10.55026 10.83929 XP_011097600.1 L-ascorbate oxidase [Sesamum indicum] Q40588|ASO_TOBAC L-ascorbate oxidase OS=Nicotiana tabacum OX=4097 GN=AAO PE=2 SV=1 -- -- -- -- -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase Molecular Function: copper ion binding (GO:0005507);|Cellular Component: extracellular region (GO:0005576);|Molecular Function: L-ascorbate oxidase activity (GO:0008447); "PF00394.21,PF07731.13,PF07732.14" Multicopper oxidase|Multicopper oxidase|Multicopper oxidase TRINITY_DN21399_c0_g2_i3 138.6605077 195.6560182 81.66499711 0.417390673 -1.260529733 1.96E-08 2.39E-07 Down 11.01405 10.82995 10.75419 3.239725 4.10032 3.626954 XP_012847040.1 PREDICTED: ethylene-responsive transcription factor TINY-like [Erythranthe guttata] Q9LYD3|DREB3_ARATH Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1 sind:105171657 K09286 EREBP EREBP-like factor -- -- -- -- -- -- -- K ENOG410YM26 dehydration-responsive element-binding protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);" PF00847.19 AP2 domain TRINITY_DN21401_c0_g1_i1 73.58570346 138.6694915 8.501915461 0.061310641 -4.027718693 5.79E-27 2.83E-25 Down 15.49291 14.56888 15.01989 0.9820231 0.7437519 0.5384781 XP_011083933.1 uncharacterized protein LOC105166323 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YJ5T NA -- -- -- TRINITY_DN21402_c0_g3_i2 34.06255104 49.57002719 18.55507489 0.37432045 -1.417654226 0.040996969 0.121007569 Down 1.47638 1.217986 3.117963 0.8926699 0.3891532 0.4708783 AWN82536.1 cyclic nucleotide-gated channel 35 [Nicotiana tabacum] O65718|CNGC2_ARATH Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana OX=3702 GN=CNGC2 PE=1 SV=1 sind:105167629 K05391 CNGF "cyclic nucleotide gated channel, plant" ko04626 Plant-pathogen interaction KOG0498 "K+-channel ERG and related proteins, contain PAS/PAC sensor domain" [PT] METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Signal transduction mechanisms U ENOG410XPSE "Potassium voltage-gated channel, subfamily H (Eag-related), member" Molecular Function: intracellular cyclic nucleotide activated cation channel activity (GO:0005221);|Molecular Function: intracellular cAMP-activated cation channel activity (GO:0005222);|Molecular Function: inward rectifier potassium channel activity (GO:0005242);|Molecular Function: calcium channel activity (GO:0005262);|Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: intracellular (GO:0005622);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Biological Process: nitric oxide mediated signal transduction (GO:0007263);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: cAMP binding (GO:0030552);|Molecular Function: cGMP binding (GO:0030553);|Biological Process: calcium ion import (GO:0070509); -- -- TRINITY_DN21403_c0_g1_i2 28.13410004 52.92160178 3.3465983 0.063236905 -3.983089432 3.75E-11 6.28E-10 Down 7.110046 8.302573 8.751436 0.3836364 0.4519776 0.4266411 XP_010245208.1 PREDICTED: probable calcium-binding protein CML18 [Nelumbo nucifera] Q9M8U1|CML18_ARATH Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 PE=1 SV=1 nnu:104588816 K13448 CML calcium-binding protein CML ko04626 Plant-pathogen interaction KOG0027 Calmodulin and related proteins (EF-Hand superfamily) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms DTZ COG5126 Calcium-binding protein Cellular Component: plant-type vacuole (GO:0000325);|Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: nucleus (GO:0005634);|Biological Process: calcium-mediated signaling (GO:0019722);|Molecular Function: enzyme regulator activity (GO:0030234);|Biological Process: regulation of ion transport (GO:0043269);|Biological Process: spindle pole body organization (GO:0051300); "PF00036.31,PF13499.5,PF13405.5" EF hand|EF-hand domain pair|EF-hand domain TRINITY_DN21403_c0_g4_i1 105.4908072 168.2136714 42.76794289 0.254247723 -1.975693243 5.29E-12 9.60E-11 Down 13.49426 19.76844 15.00047 2.687481 3.614906 3.587543 XP_015086230.1 PREDICTED: uncharacterized protein LOC107029350 [Solanum pennellii] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZQDJ Domain of unknown function (DUF2828) -- PF11443.7 Domain of unknown function (DUF2828) TRINITY_DN21403_c0_g5_i1 8.951219216 16.79991088 1.102527553 0.065626988 -3.929566964 0.034664725 0.105969145 Down 0.8714136 5.990225 2.113596 0.4577104 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21405_c0_g4_i1 76.04850229 39.43874305 112.6582615 2.856537831 1.514267637 7.24E-07 7.09E-06 Up 2.113532 3.679863 3.921586 7.152814 7.358562 7.803297 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21405_c0_g7_i1 15.33767102 30.67534204 0 0 #NAME? 0.006340084 0.025918175 Down 10.74913 1.494606 2.624499 7.49E-60 6.53E-88 3.76E-40 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21406_c0_g2_i1 25.52302686 16.70373369 34.34232003 2.055966688 1.039816889 0.046156286 0.132959278 Up 1.592838 4.541608 3.117622 5.23866 3.866284 6.214066 XP_016478332.1 PREDICTED: cysteine proteinase RD19a-like [Nicotiana tabacum] P43295|RD19B_ARATH Probable cysteine protease RD19B OS=Arabidopsis thaliana OX=3702 GN=RD19B PE=2 SV=2 -- -- -- -- -- -- KOG1542 Cysteine proteinase Cathepsin F [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG4870 cathepsin Cellular Component: lytic vacuole (GO:0000323);|Molecular Function: cysteine-type endopeptidase activity (GO:0004197);|Cellular Component: extracellular space (GO:0005615);|Cellular Component: lysosome (GO:0005764);|Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603); PF00112.22 Papain family cysteine protease TRINITY_DN21408_c0_g3_i4 32.82836804 44.31135629 21.3453798 0.481713529 -1.053752653 0.023997291 0.07855405 Down 1.921205 2.704955 1.795624 0.8070745 1.207529 0.4383375 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21409_c0_g1_i7 78.75990132 50.09927281 107.4205298 2.144153474 1.100408174 0.000211636 0.001309365 Up 2.825392 2.853932 3.497258 4.703079 4.742104 6.477607 -- -- O82089|CCH_ARATH Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1 -- -- -- -- -- -- KOG1603 Copper chaperone [P] METABOLISM Inorganic ion transport and metabolism -- -- -- Biological Process: copper ion transport (GO:0006825);|Biological Process: cellular copper ion homeostasis (GO:0006878);|Cellular Component: chloroplast (GO:0009507);|Biological Process: response to salt stress (GO:0009651);|Molecular Function: copper chaperone activity (GO:0016531);|Molecular Function: protein domain specific binding (GO:0019904);|Biological Process: response to cadmium ion (GO:0046686);|Cellular Component: apoplast (GO:0048046); -- -- TRINITY_DN21409_c0_g2_i3 43.38376968 28.71147925 58.0560601 2.022050469 1.015819007 0.022113872 0.073496485 Up 4.239003 6.364784 5.143622 7.235471 6.284344 12.41713 XP_019190531.1 PREDICTED: uncharacterized protein LOC109184991 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDI6 hAT dimerisation domain-containing protein -- -- -- TRINITY_DN21409_c0_g3_i1 36.74670282 23.7586101 49.73479555 2.093337756 1.065805106 0.01350651 0.048973642 Up 3.389804 2.203934 3.52044 5.394306 5.087346 4.798626 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21414_c0_g2_i1 18.38509965 36.7701993 0 0 #NAME? 4.13E-12 7.56E-11 Down 4.800317 7.522204 5.268243 0 0 4.28E-50 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21419_c0_g2_i1 6.208584176 12.41716835 0 0 #NAME? 0.006481334 0.026431335 Down 3.534734 0 3.264361 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21421_c0_g3_i1 10.90993947 17.74353622 4.07634272 0.229736771 -2.121946306 0.011827512 0.043788129 Down 1.080556 0.9357473 1.283589 0.2436844 0.2399138 0.1861094 XP_011071497.2 "probable carotenoid cleavage dioxygenase 4, chloroplastic [Sesamum indicum]" O49675|CCD4_ARATH "Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCD4 PE=1 SV=1" sind:105156900 K09840 NCED 9-cis-epoxycarotenoid dioxygenase ko00906 Carotenoid biosynthesis KOG1285 "Beta, beta-carotene 15,15'-dioxygenase and related enzymes" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG3670 dioxygenase Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: plastoglobule (GO:0010287);|Molecular Function: carotenoid dioxygenase activity (GO:0010436);|Biological Process: carotene catabolic process (GO:0016121);|Molecular Function: 9-cis-epoxycarotenoid dioxygenase activity (GO:0045549);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN21427_c0_g1_i1 22.33097203 12.46545839 32.19648567 2.582856135 1.368967287 0.011160083 0.041684328 Up 2.809511 2.232232 1.731248 6.5232 4.330813 3.480704 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21428_c0_g1_i3 97.25184144 144.1860948 50.31758804 0.348976703 -1.518797366 3.70E-06 3.23E-05 Down 13.25204 19.84409 21.13038 4.263332 6.693769 4.287791 CDP06213.1 unnamed protein product [Coffea canephora] Q9ZRA8|TBB5_WHEAT Tubulin beta-5 chain OS=Triticum aestivum OX=4565 GN=TUBB5 PE=2 SV=1 bvg:104889522 K07375 TUBB tubulin beta ko04145 Phagosome KOG1375 Beta tubulin [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5023 protein polymerization Molecular Function: GTPase activity (GO:0003924);|Molecular Function: structural constituent of cytoskeleton (GO:0005200);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based process (GO:0007017); PF00091.24 "Tubulin/FtsZ family, GTPase domain" TRINITY_DN21433_c0_g1_i1 161.1107435 100.1248582 222.0966289 2.218196689 1.149387296 1.62E-08 1.99E-07 Up 2.251331 2.936661 2.021753 4.143579 4.488107 4.309609 XP_011090814.1 uncharacterized protein LOC105171410 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZV59 expressed protein -- -- -- TRINITY_DN2143_c0_g1_i1 8.822900116 17.64580023 0 0 #NAME? 3.32E-06 2.92E-05 Down 2.355724 1.594968 3.432009 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21444_c0_g1_i6 465.4564103 867.0541561 63.85866443 0.073650145 -3.763167822 4.43E-132 1.65E-129 Down 16.48068 16.50284 17.92844 1.001917 1.035179 0.99265 XP_012836678.1 PREDICTED: receptor-like protein 12 [Erythranthe guttata] F4KHA2|RLP54_ARATH Receptor-like protein 54 OS=Arabidopsis thaliana OX=3702 GN=RLP54 PE=3 SV=1 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); "PF13855.5,PF12799.6,PF00560.32,PF05725.11,PF08263.11" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|FNIP Repeat|Leucine rich repeat N-terminal domain TRINITY_DN21444_c0_g3_i1 63.10667755 84.62387304 41.58948206 0.491462758 -1.024845998 0.00174613 0.008543935 Down 5.341362 5.212955 5.020614 1.515661 2.491911 2.152046 EYU29613.1 hypothetical protein MIMGU_mgv1a004108mg [Erythranthe guttata] Q9SA85|BBE8_ARATH Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana OX=3702 GN=At1g30700 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: FAD binding (GO:0071949); -- -- TRINITY_DN21444_c0_g4_i1 6.533197485 13.06639497 0 0 #NAME? 0.0004587 0.002614812 Down 0.8356114 1.988305 3.509216 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21451_c0_g3_i1 15.43884459 26.71768192 4.160007267 0.155702403 -2.683136888 0.000245727 0.001495812 Down 2.967042 3.471402 2.579089 0.2334768 0.2322358 0.7060314 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21455_c2_g1_i1 22.22594208 43.71686579 0.735018369 0.016813153 -5.894265858 2.29E-06 2.08E-05 Down 3.808293 10.62932 5.907008 0.3046767 9.32E-07 1.30E-28 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21455_c2_g2_i1 191.0453128 349.6979837 32.39264182 0.092630336 -3.432371439 2.69E-53 3.24E-51 Down 27.67297 23.44826 24.33073 2.334536 1.301573 1.990175 XP_011085984.1 protein DOG1-like 4 [Sesamum indicum] Q84JC2|DOGL4_ARATH Protein DOG1-like 4 OS=Arabidopsis thaliana OX=3702 GN=DOGL4 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG4111BI9 transcription "Biological Process: transcription, DNA-templated (GO:0006351);|Molecular Function: sequence-specific DNA binding (GO:0043565);" PF14144.5 Seed dormancy control TRINITY_DN21455_c2_g3_i2 45.51359879 73.20750037 17.81969721 0.243413545 -2.038518643 4.48E-07 4.53E-06 Down 7.468794 6.926161 6.59351 1.271791 1.53131 1.330966 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21458_c0_g1_i1 11.61923568 22.08110633 1.15736504 0.052414269 -4.253896581 1.37E-05 0.000108345 Down 2.739627 4.132191 3.898037 9.86E-13 3.71E-74 0.449857 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21458_c0_g2_i1 5.846542634 1.674386165 10.0186991 5.983505666 2.58099099 0.03569594 0.108500456 Up 0 0.3454575 0.2690112 0.5860002 1.475625 1.148872 XP_012842613.1 PREDICTED: uncharacterized protein LOC105962823 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21458_c0_g6_i1 8.805717482 17.61143496 0 0 #NAME? 3.65E-06 3.19E-05 Down 2.150833 1.603461 2.720664 0 0 0 XP_012848943.1 PREDICTED: anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase-like [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG1819 Transferase -- -- -- TRINITY_DN21458_c0_g7_i1 7.223615567 1.428347119 13.01888401 9.114649961 3.188187252 0.004719821 0.020183403 Up 0 0.3548217 0.1866353 1.162223 1.193938 1.379913 XP_011100723.1 uncharacterized protein LOC105178863 [Sesamum indicum] Q9FFA0|DUF10_ARATH DUF724 domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=DUF10 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHUE Agenet domain Biological Process: regulation of growth (GO:0040008); -- -- TRINITY_DN21458_c0_g8_i1 10.94463775 4.439544803 17.4497307 3.930522492 1.974721106 0.019873674 0.067448648 Up 0.2771606 0.3546283 0.5680876 1.380887 1.199761 1.186002 XP_011100723.1 uncharacterized protein LOC105178863 [Sesamum indicum] Q9FZD9|DUF3_ARATH DUF724 domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=DUF3 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: vacuole (GO:0005773);|Biological Process: regulation of growth (GO:0040008);|Molecular Function: protein homodimerization activity (GO:0042803); PF05641.11 Agenet domain TRINITY_DN21465_c0_g1_i4 179.0291641 47.24722016 310.8111079 6.57839989 2.71773671 1.98E-32 1.20E-30 Up 2.066537 2.112118 2.312009 9.589291 11.79703 13.0711 XP_011097349.1 pectate lyase [Sesamum indicum] O24554|PLY_ZINVI Pectate lyase OS=Zinnia violacea OX=34245 PE=1 SV=1 sind:105176296 K01728 pel pectate lyase ko00040 Pentose and glucuronate interconversions -- -- -- -- -- G COG3866 pectate lyase activity Molecular Function: pectate lyase activity (GO:0030570);|Biological Process: pectin catabolic process (GO:0045490);|Molecular Function: metal ion binding (GO:0046872); PF00544.18 Pectate lyase TRINITY_DN21467_c0_g2_i1 10.13766856 20.27533712 0 0 #NAME? 0.003099793 0.014056833 Down 2.806943 1.348586 8.232435 2.66E-66 6.58E-84 2.17E-81 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21470_c0_g3_i1 52.35140867 72.4084119 32.29440544 0.446003504 -1.16487305 0.001746479 0.008544719 Down 17.68789 13.92032 11.80948 5.204577 2.59583 7.944103 EMS65944.1 "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 2 [Triticum urartu]" Q6ZH45|STLP4_ORYSJ Sialyltransferase-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=STLP4 PE=2 SV=1 -- -- -- -- -- -- KOG2692 Sialyltransferase [G] METABOLISM Carbohydrate transport and metabolism S ENOG410XT8P "ST3 beta-galactoside alpha-2,3-sialyltransferase" Cellular Component: Golgi membrane (GO:0000139);|Biological Process: protein glycosylation (GO:0006486);|Molecular Function: sialyltransferase activity (GO:0008373);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN21471_c1_g3_i1 15.42164915 22.71416598 8.129132328 0.357888216 -1.482419055 0.027730643 0.088465605 Down 1.696208 1.957651 2.600381 0.635452 0.7207836 0.4671844 XP_021636884.1 uncharacterized protein LOC110632845 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21471_c1_g4_i1 30.51263089 47.6543311 13.37093067 0.280581646 -1.833507454 0.017908335 0.061809084 Down 3.258071 7.818309 3.407507 1.595884 0.7236053 0.9620313 XP_019255935.1 PREDICTED: protein ECERIFERUM 1-like [Nicotiana attenuata] F4HVY0|CER1_ARATH Protein ECERIFERUM 1 OS=Arabidopsis thaliana OX=3702 GN=CER1 PE=1 SV=1 sot:102599091 K15404 "K15404, CER1" aldehyde decarbonylase ko00073 "Cutin, suberine and wax biosynthesis" -- -- -- -- -- S ENOG4111G66 WAX2-like Molecular Function: sphingosine hydroxylase activity (GO:0000170);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: wax biosynthetic process (GO:0010025);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: sphingolipid biosynthetic process (GO:0030148);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: alkane biosynthetic process (GO:0043447);|Biological Process: defense response to fungus (GO:0050832); -- -- TRINITY_DN21477_c0_g1_i2 121.063297 165.8513671 76.27522679 0.459901104 -1.120604435 2.24E-06 2.03E-05 Down 13.74046 13.68805 15.45047 6.513833 5.20417 4.131502 CDP07564.1 unnamed protein product [Coffea canephora] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41125AS expressed protein -- PF13867.5 Sin3 binding region of histone deacetylase complex subunit SAP30 TRINITY_DN21488_c2_g2_i1 11.64245327 20.26925909 3.01564744 0.148779362 -2.748753677 0.001809347 0.008809577 Down 4.185856 6.099255 1.994754 0 0.4710519 0.9783496 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21488_c2_g3_i2 35.45980908 67.20551068 3.714107484 0.055264925 -4.177492063 2.30E-14 5.03E-13 Down 3.906522 5.075208 4.421569 0.2355786 0.157803 0.1732233 XP_021808903.1 uncharacterized protein LOC110752531 [Prunus avium] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- "PF14244.5,PF14223.5" gag-polypeptide of LTR copia-type|gag-polypeptide of LTR copia-type TRINITY_DN21488_c2_g4_i2 74.88189653 108.4416152 41.3221779 0.381054615 -1.391930307 5.37E-06 4.56E-05 Down 8.424977 8.835226 7.112066 3.067042 1.845184 2.645397 XP_012835718.1 PREDICTED: thaumatin-like protein 1b [Erythranthe guttata] A0A1P8B554|THLP1_ARATH Thaumatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=TLP1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111GDH thaumatin-like protein Biological Process: defense response (GO:0006952);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to ethylene (GO:0009723); PF00314.16 Thaumatin family TRINITY_DN21488_c2_g7_i1 15.63150122 31.26300243 0 0 #NAME? 2.67E-10 4.06E-09 Down 2.362918 2.396905 4.399191 0 1.98E-53 4.20E-55 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21496_c0_g1_i1 5.61979685 0.984156182 10.25543752 10.42053863 3.381357946 0.026770236 0.085914969 Up 0.06759232 1.37E-25 0.5699489 1.42654 2.992014 0.5811981 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21496_c0_g3_i1 8.91278233 15.98801874 1.837545922 0.114932685 -3.121138959 0.002178791 0.010360554 Down 1.949562 3.09154 3.134066 0.8080256 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21496_c0_g4_i3 68.50457563 101.4546287 35.55452256 0.350447515 -1.512729699 1.60E-06 1.48E-05 Down 2.040638 2.725333 2.555203 0.6208067 0.5069835 0.9547404 XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YPQ5 Retro-transposon -- -- -- TRINITY_DN21515_c0_g1_i3 216.3785378 144.0521891 288.7048866 2.004168687 1.003003942 3.07E-08 3.64E-07 Up 5.048988 5.725487 5.946946 9.016679 8.344478 9.700123 XP_011081194.1 zinc finger Ran-binding domain-containing protein 2-like isoform X1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF07800.11 Protein of unknown function (DUF1644) TRINITY_DN21523_c1_g2_i1 7.994601603 13.81579179 2.173411413 0.157313562 -2.668285048 0.012120099 0.044685482 Down 2.512594 1.211058 1.63299 0 0.6637765 0 XP_021692914.1 uncharacterized protein LOC110673970 isoform X1 [Hevea brasiliensis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN21523_c1_g5_i2 14.35892494 25.0142903 3.703559586 0.148057752 -2.755768067 0.000286783 0.001719222 Down 1.204007 1.058988 1.587704 0.07748325 0.2226605 0.1644224 XP_021692914.1 uncharacterized protein LOC110673970 isoform X1 [Hevea brasiliensis] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF00385.23 Chromo (CHRromatin Organisation MOdifier) domain TRINITY_DN21524_c0_g1_i1 25.09853076 50.19706152 0 0 #NAME? 0.009548047 0.036670996 Down 4.701449 20.46525 1.462741 9.29E-38 0 1.87E-44 OMP02538.1 hypothetical protein COLO4_11011 [Corchorus olitorius] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZQDJ Domain of unknown function (DUF2828) -- -- -- TRINITY_DN21524_c1_g1_i8 100.0200166 64.6828706 135.3571625 2.092627635 1.065315619 5.13E-05 0.000363045 Up 1.620445 2.305374 2.355349 3.278 3.541805 3.762775 PIN18174.1 hypothetical protein CDL12_09159 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZQDJ Domain of unknown function (DUF2828) -- PF11443.7 Domain of unknown function (DUF2828) TRINITY_DN21525_c2_g1_i1 168.2512028 227.6139798 108.8884259 0.478390765 -1.063738556 1.49E-06 1.39E-05 Down 6.06012 7.59568 5.465175 2.82198 2.53909 2.021 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21527_c0_g1_i3 141.3940755 236.3317518 46.45639927 0.196572822 -2.346864229 4.16E-23 1.64E-21 Down 16.4511 14.43812 12.97393 2.660428 2.002123 2.273506 AWW87404.1 NF-Y4 protein [Tectona grandis] Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1 -- -- -- -- -- -- KOG1561 "CCAAT-binding factor, subunit B (HAP2)" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5224 Nuclear transcription factor Y "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);" PF02045.14 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B TRINITY_DN21550_c0_g1_i4 769.54403 441.384546 1097.703514 2.486955023 1.314380417 4.29E-35 2.89E-33 Up 19.65509 19.92105 21.54591 41.93309 40.70871 39.95763 XP_011088693.1 lysM domain-containing GPI-anchored protein 2 [Sesamum indicum] O23006|LYM2_ARATH LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis thaliana OX=3702 GN=LYM2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XV98 domain protein Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Molecular Function: chitin binding (GO:0008061);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: anchored component of membrane (GO:0031225);|Cellular Component: anchored component of plasma membrane (GO:0046658); PF01476.19 LysM domain TRINITY_DN21552_c0_g1_i22 136.4281161 212.0647046 60.79152752 0.286664995 -1.802562348 7.45E-15 1.71E-13 Down 8.063257 8.350788 7.578389 1.355048 1.877516 2.318724 OIT28070.1 sialyltransferase-like protein 2 [Nicotiana attenuata] Q6ZH45|STLP4_ORYSJ Sialyltransferase-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=STLP4 PE=2 SV=1 -- -- -- -- -- -- KOG2692 Sialyltransferase [G] METABOLISM Carbohydrate transport and metabolism S ENOG410XT8P "ST3 beta-galactoside alpha-2,3-sialyltransferase" Cellular Component: Golgi membrane (GO:0000139);|Biological Process: protein glycosylation (GO:0006486);|Molecular Function: sialyltransferase activity (GO:0008373);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN21552_c0_g2_i1 253.5151331 429.1561579 77.87410836 0.181458676 -2.462287055 4.60E-42 3.93E-40 Down 50.29516 44.51738 44.46622 6.354059 6.168961 7.952979 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21561_c0_g1_i1 37.43104826 59.63042613 15.23167039 0.255434539 -1.968974482 9.35E-06 7.60E-05 Down 2.613014 2.703267 2.31574 0.5414469 0.5103756 0.5361739 PIN22448.1 Auxilin-like protein and related proteins containing DnaJ domain [Handroanthus impetiginosus] Q9C9Q4|JAC1_ARATH J domain-containing protein required for chloroplast accumulation response 1 OS=Arabidopsis thaliana OX=3702 GN=JAC1 PE=1 SV=1 -- -- -- -- -- -- KOG0431 Auxilin-like protein and related proteins containing DnaJ domain [R] POORLY CHARACTERIZED General function prediction only S ENOG410YGT5 UBA TS-N domain protein Cellular Component: cytoplasm (GO:0005737);|Biological Process: receptor-mediated endocytosis (GO:0006898);|Biological Process: actin filament organization (GO:0007015);|Biological Process: chloroplast avoidance movement (GO:0009903);|Biological Process: chloroplast accumulation movement (GO:0009904);|Molecular Function: clathrin binding (GO:0030276);|Cellular Component: vesicle (GO:0031982);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Biological Process: cellular response to blue light (GO:0071483);|Biological Process: clathrin coat disassembly (GO:0072318);|Biological Process: clathrin-dependent endocytosis (GO:0072583); -- -- TRINITY_DN21568_c1_g5_i4 134.444281 248.3549819 20.53358016 0.08267835 -3.596346589 1.83E-32 1.12E-30 Down 10.46291 10.07178 13.30759 0.8892206 0.4634992 0.9244237 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21568_c1_g6_i1 23.81570559 8.574759128 39.05665204 4.554839554 2.187400236 9.34E-05 0.000622949 Up 1.97448 0 1.495682 3.998132 4.214647 4.652095 XP_011090920.1 monothiol glutaredoxin-S5-like [Sesamum indicum] O23420|GRXS5_ARATH Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana OX=3702 GN=GRXS5 PE=3 SV=1 sind:105171482 K03676 "grxC, GLRX, GLRX2" glutaredoxin 3 -- -- KOG1752 Glutaredoxin and related proteins [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0695 Glutaredoxin "Biological Process: negative regulation of transcription by RNA polymerase II (GO:0000122);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: electron transfer activity (GO:0009055);|Molecular Function: protein disulfide oxidoreductase activity (GO:0015035);|Biological Process: cell redox homeostasis (GO:0045454);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);" PF00462.23 Glutaredoxin TRINITY_DN21570_c0_g4_i1 5.094139094 9.030913147 1.15736504 0.128155926 -2.9640279 0.030587042 0.095731758 Down 2.122919 1.535141 1.679557 0 0 0.5248713 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21574_c1_g5_i1 85.64043693 53.26609504 118.0147788 2.215570312 1.147678112 0.007852044 0.031131788 Up 4.979635 4.880568 7.852817 6.926847 13.8869 10.9833 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21579_c0_g1_i4 1057.963806 408.9575562 1706.970057 4.173954072 2.061414726 5.85E-100 1.47E-97 Up 25.31473 24.20966 23.09766 81.84064 84.60099 78.13296 PIN19552.1 Peroxidase [Handroanthus impetiginosus] A7NY33|PER4_VITVI Peroxidase 4 OS=Vitis vinifera OX=29760 GN=GSVIVT00023967001 PE=1 SV=1 vvi:100257005 K00430 E1.11.1.7 peroxidase ko00940 Phenylpropanoid biosynthesis -- -- -- -- -- G ENOG410YETZ peroxidase Molecular Function: peroxidase activity (GO:0004601);|Cellular Component: extracellular region (GO:0005576);|Biological Process: response to oxidative stress (GO:0006979);|Molecular Function: heme binding (GO:0020037);|Biological Process: hydrogen peroxide catabolic process (GO:0042744);|Molecular Function: metal ion binding (GO:0046872); PF00141.22 Peroxidase TRINITY_DN2157_c0_g1_i1 7.530361738 12.09463957 2.966083902 0.245239545 -2.027736464 0.049568493 0.140725662 Down 1.643502 1.30882 1.691042 0.3973109 0.2664308 0.2981463 XP_022846460.1 zinc finger protein CONSTANS-LIKE 14-like [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YZD0 CCT motif -- PF06203.13 CCT motif TRINITY_DN21582_c0_g1_i1 15.89312386 28.05913503 3.727112698 0.132830634 -2.912340188 8.35E-05 0.000563087 Down 1.663281 1.955301 1.274287 0.1118969 0.2202371 0.2324887 PIN12658.1 hypothetical protein CDL12_14726 [Handroanthus impetiginosus] Q9SZT4|CSCLE_ARATH CSC1-like protein At4g35870 OS=Arabidopsis thaliana OX=3702 GN=GFS10 PE=2 SV=1 -- -- -- -- -- -- KOG1134 Uncharacterized conserved protein [R] POORLY CHARACTERIZED General function prediction only S COG5594 transmembrane protein 63C Molecular Function: calcium activated cation channel activity (GO:0005227);|Cellular Component: intracellular (GO:0005622);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: protein targeting to vacuole (GO:0006623);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN21582_c0_g2_i2 15.25271195 26.85670179 3.648722099 0.135858905 -2.879818963 0.000113093 0.000740942 Down 3.330807 2.14036 4.28307 0.5735646 0.5719093 0 XP_012852451.1 PREDICTED: CSC1-like protein At4g35870 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21582_c0_g3_i2 47.04109677 1.674386165 92.40780737 55.18906529 5.786310546 1.47E-20 4.99E-19 Up 9.40E-83 0.207807 0.1650112 4.353354 7.413884 6.052477 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21582_c0_g4_i1 21.34652709 42.69305418 0 0 #NAME? 1.37E-11 2.39E-10 Down 10.39131 6.336148 5.282313 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21582_c0_g5_i1 19.37447538 38.74895077 0 0 #NAME? 8.28E-13 1.61E-11 Down 3.209368 3.051926 3.760081 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21583_c1_g1_i3 42.28556999 26.87418187 57.6969581 2.146928914 1.102274424 0.02270484 0.075097698 Up 1.969106 0.6217037 0.8988466 2.621012 1.960924 1.441556 PSS35767.1 Pentatricopeptide repeat-containing protein [Actinidia chinensis var. chinensis] Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2 -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN21583_c1_g3_i1 11.45411965 4.739671396 18.16856791 3.83329695 1.938585762 0.019251647 0.06572084 Up 1.425207 0 1.486506 1.34051 4.18126 2.959063 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21586_c0_g1_i20 77.41429696 104.1942675 50.63432638 0.485960769 -1.041088243 0.001007735 0.005259155 Down 1.904414 3.360951 2.700729 0.922837 1.021854 1.17946 PIN14199.1 Kinesin-like protein [Handroanthus impetiginosus] Q27IK6|KN12D_ARATH Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 sind:105169579 K10400 KIF15 kinesin family member 15 -- -- -- -- -- -- -- Z COG5059 Kinesin family member Biological Process: mitotic cytokinesis (GO:0000281);|Biological Process: cytokinesis by cell plate formation (GO:0000911);|Molecular Function: microtubule motor activity (GO:0003777);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: kinesin complex (GO:0005871);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based movement (GO:0007018);|Molecular Function: microtubule binding (GO:0008017);|Cellular Component: phragmoplast (GO:0009524);|Molecular Function: ATPase activity (GO:0016887); -- -- TRINITY_DN21595_c0_g1_i1 4.572425466 9.144850932 0 0 #NAME? 0.001823182 0.008869137 Down 1.570923 0.8377767 1.641386 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21598_c0_g1_i1 5.581287216 11.16257443 0 0 #NAME? 0.00854653 0.033432665 Down 1.98E-09 3.437206 2.693108 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21599_c0_g2_i1 6.855315268 11.45073794 2.259892593 0.197357813 -2.341114464 0.030600703 0.095750859 Down 1.351078 1.725671 2.810148 0.4443857 0 0.4344956 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2159_c0_g1_i1 4.860011014 9.720022029 0 0 #NAME? 0.005969141 0.024654886 Down 2.417692 1.303531 0.3364234 0 0 0 XP_012856640.1 PREDICTED: probable aquaporin NIP-type [Erythranthe guttata] P49173|NIP1_NICAL Probable aquaporin NIP-type OS=Nicotiana alata OX=4087 PE=2 SV=1 sind:105177894 K09874 NIP aquaporin NIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Molecular Function: channel activity (GO:0015267);|Cellular Component: integral component of membrane (GO:0016021); PF00230.19 Major intrinsic protein TRINITY_DN21602_c0_g3_i2 11.27441027 22.54882055 0 0 #NAME? 8.69E-08 9.66E-07 Down 0.9627285 1.704538 2.457924 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21602_c0_g4_i1 4.049642854 8.099285708 0 0 #NAME? 0.00438556 0.018952181 Down 1.979798 1.932176 1.025957 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21604_c0_g1_i1 45.05569513 65.44662989 24.66476037 0.376868303 -1.407867633 0.00040556 0.002346068 Down 4.478835 4.706525 2.869346 1.252162 0.8411024 1.59679 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21604_c1_g7_i2 122.3050852 168.458659 76.15151136 0.452048662 -1.145450012 1.25E-06 1.18E-05 Down 8.891403 8.008064 8.073425 2.475515 2.761109 3.873689 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21611_c0_g1_i1 9.093285619 18.18657124 0 0 #NAME? 0.008529444 0.033378594 Down 1.069771 4.712373 0.9267979 2.22E-63 8.64E-65 2.24E-77 XP_006352467.1 PREDICTED: uncharacterized protein LOC102606324 [Solanum tuberosum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21611_c0_g2_i2 18.882835 37.76566999 0 0 #NAME? 5.88E-07 5.84E-06 Down 7.413342 2.801424 3.685237 2.63E-43 2.04E-51 6.65E-65 XP_012841682.1 PREDICTED: uncharacterized protein LOC105961969 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21611_c0_g3_i1 12.17011364 24.34022728 0 0 #NAME? 3.81E-05 0.000276421 Down 0.7637647 3.52046 3.357504 9.09E-22 1.45E-33 2.70E-39 PIN25433.1 hypothetical protein CDL12_01824 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21611_c0_g4_i1 38.80466914 74.2209077 3.388430573 0.045653316 -4.453136528 4.36E-13 8.68E-12 Down 8.203144 15.30672 12.70148 0.2386397 0.2361291 0.7777084 XP_012848410.1 PREDICTED: uncharacterized protein LOC105968326 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21611_c0_g5_i4 391.994501 230.2274542 553.7615479 2.405280247 1.266204997 5.19E-20 1.70E-18 Up 15.64877 10.46769 12.8473 24.41571 25.28698 26.02397 XP_011086229.1 uncharacterized protein LOC105168020 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YRP8 Protein of unknown function (DUF506) -- PF04720.11 PDDEXK-like family of unknown function TRINITY_DN21611_c0_g7_i1 23.81322337 47.62644675 0 0 #NAME? 4.75E-08 5.48E-07 Down 4.053983 12.50847 8.874594 5.74E-37 1.50E-21 0.00027702 EYU27714.1 hypothetical protein MIMGU_mgv1a021776mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YRP8 Protein of unknown function (DUF506) -- PF04720.11 PDDEXK-like family of unknown function TRINITY_DN21613_c0_g1_i9 368.7142867 511.4585559 225.9700176 0.441814913 -1.178485977 1.70E-16 4.37E-15 Down 29.01617 31.45396 27.58083 9.060034 9.635347 12.75656 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21614_c3_g1_i2 625.5564911 885.3948618 365.7181205 0.41305652 -1.275588891 1.98E-28 1.04E-26 Down 39.96949 37.68498 37.16892 12.30375 12.15523 13.8177 PIN21556.1 Multitransmembrane protein [Handroanthus impetiginosus] Q9LUR4|SWT16_ARATH Bidirectional sugar transporter SWEET16 OS=Arabidopsis thaliana OX=3702 GN=SWEET16 PE=1 SV=1 sly:101244429 K15382 "SLC50A, SWEET" solute carrier family 50 (sugar transporter) -- -- KOG1623 Multitransmembrane protein [R] POORLY CHARACTERIZED General function prediction only U ENOG4111M4R sugar transporter Molecular Function: fructose transmembrane transporter activity (GO:0005353);|Molecular Function: glucose transmembrane transporter activity (GO:0005355);|Cellular Component: integral component of plasma membrane (GO:0005887);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: cellular response to nitrogen starvation (GO:0006995);|Molecular Function: sucrose transmembrane transporter activity (GO:0008515);|Biological Process: response to cold (GO:0009409);|Cellular Component: plant-type vacuole membrane (GO:0009705);|Biological Process: response to sucrose (GO:0009744);|Biological Process: response to glucose (GO:0009749);|Biological Process: response to fructose (GO:0009750);|Molecular Function: sugar transmembrane transporter activity (GO:0051119);|Biological Process: protein homooligomerization (GO:0051260);|Biological Process: fructose export from vacuole to cytoplasm (GO:1902334); PF03083.15 Sugar efflux transporter for intercellular exchange TRINITY_DN21614_c4_g3_i1 6.822341838 13.64468368 0 0 #NAME? 0.000230297 0.001410015 Down 3.198274 0.6942516 2.223032 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21614_c4_g6_i1 6.125133489 10.78023024 1.470036737 0.136364132 -2.874463876 0.01921427 0.06561298 Down 2.504459 1.179921 2.815189 0.6428863 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21619_c1_g1_i1 6.253572574 12.50714515 0 0 #NAME? 0.000153366 0.000978323 Down 1.526445 1.301559 2.020957 0 0 0 ONI06592.1 hypothetical protein PRUPE_5G069200 [Prunus persica] Q39079|DNJ13_ARATH Chaperone protein dnaJ 13 OS=Arabidopsis thaliana OX=3702 GN=ATJ13 PE=1 SV=2 pper:PRUPE_ppa008140mg K09531 DNAJC11 DnaJ homolog subfamily C member 11 -- -- KOG0718 Molecular chaperone (DnaJ superfamily) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0484 "ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)" Cellular Component: plastid (GO:0009536);|Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: response to very low light intensity stimulus (GO:0055122); -- -- TRINITY_DN21624_c0_g1_i2 242.0332186 344.4904061 139.5760312 0.405166672 -1.30341259 5.34E-14 1.14E-12 Down 12.66806 13.02383 12.80508 4.006329 4.486352 4.087738 XP_011095837.1 aspartyl protease family protein 2 [Sesamum indicum] Q9LTW4|NANA_ARATH "Aspartic proteinase NANA, chloroplast OS=Arabidopsis thaliana OX=3702 GN=NANA PE=1 SV=1" -- -- -- -- -- -- KOG1339 Aspartyl protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XNV7 aspartic Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: proteolysis (GO:0006508);|Biological Process: circadian rhythm (GO:0007623);|Cellular Component: chloroplast (GO:0009507);|Biological Process: response to sucrose (GO:0009744);|Biological Process: chloroplast-nucleus signaling pathway (GO:0010019);|Biological Process: maintenance of shoot apical meristem identity (GO:0010492);|Biological Process: protein catabolic process (GO:0030163); "PF14543.5,PF14541.5,PF00026.22" Xylanase inhibitor N-terminal|Xylanase inhibitor C-terminal|Eukaryotic aspartyl protease TRINITY_DN21629_c0_g1_i1 4.68894659 0 9.37789318 Inf Inf 0.000834867 0.004451678 Up 8.72E-05 0 1.10E-85 0.4188855 1.241851 1.917892 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21640_c0_g5_i1 12.86782432 18.95597086 6.77967778 0.357653946 -1.483363736 0.046918464 0.134667709 Down 2.783651 5.383667 3.368206 1.697086 0 1.667246 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21650_c0_g2_i1 45.29154494 65.04480911 25.53828077 0.392625962 -1.348772521 0.000440439 0.002521164 Down 7.110597 11.10657 9.178156 2.548252 1.681789 4.548374 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21654_c0_g1_i7 89.95323105 50.92664852 128.9798136 2.532658585 1.340652607 7.45E-07 7.29E-06 Up 1.447041 2.541316 1.423511 3.963474 3.356242 3.697034 OAP16589.1 hypothetical protein AXX17_AT1G29260 [Arabidopsis thaliana] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21658_c2_g1_i1 117.6967605 182.891255 52.50226598 0.287068214 -1.800534498 0.003508808 0.015628332 Down 20.73526 10.44418 10.29238 3.941115 3.343646 2.283722 XP_012066659.1 uncharacterized protein LOC105629655 [Jatropha curcas] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21658_c2_g2_i1 84.64393412 132.1130517 37.17481653 0.281386404 -1.829375473 4.23E-05 0.000304063 Down 8.735821 9.460341 15.37372 2.487242 2.482691 2.675144 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21664_c0_g2_i1 12.63910768 6.32716355 18.95105182 2.995189182 1.582647129 0.036687615 0.110765609 Up 1.54442 0.5122185 1.23511 2.846507 2.46942 2.658028 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21665_c1_g10_i1 13.8156496 26.18235826 1.448940942 0.055340353 -4.17552435 2.34E-05 0.000176437 Down 4.077053 6.172803 2.367427 7.88E-17 0.5771911 0.000187548 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21665_c1_g1_i4 149.0879562 252.6104219 45.5654904 0.180378506 -2.470900662 1.08E-26 5.21E-25 Down 9.640064 10.36862 10.30605 1.323239 1.234305 1.883165 PIN09680.1 Tripeptidyl-peptidase II [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" -- -- -- TRINITY_DN21665_c1_g4_i2 45.61505233 61.42339167 29.806713 0.485266479 -1.043150889 0.00693677 0.028026775 Down 5.6392 6.390724 5.154204 1.862045 2.160134 2.680517 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21665_c1_g7_i2 95.94454458 60.82672862 131.0623605 2.154683698 1.107476101 4.79E-05 0.00034045 Up 8.648167 3.536745 5.380801 9.073027 9.91221 11.62045 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21665_c2_g1_i1 360.0424813 589.0530385 131.0319242 0.222445036 -2.168479193 1.66E-42 1.44E-40 Down 54.38286 64.15734 66.21545 9.598658 12.54711 10.96313 XP_012858941.1 PREDICTED: subtilisin-like protease SBT1.7 [Erythranthe guttata] O49607|SBT16_ARATH Subtilisin-like protease SBT1.6 OS=Arabidopsis thaliana OX=3702 GN=SBT1.6 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Molecular Function: serine-type peptidase activity (GO:0008236);|Biological Process: plant-type cell wall modification (GO:0009827);|Cellular Component: membrane (GO:0016020); -- -- TRINITY_DN21673_c0_g1_i1 582.9935477 338.8852275 827.1018678 2.440654831 1.287268277 1.17E-19 3.74E-18 Up 18.07163 15.37373 17.12566 36.98724 32.08533 30.57103 EYU24604.1 hypothetical protein MIMGU_mgv1a015884mg [Erythranthe guttata] Q9XHS0|RS12_HORVU 40S ribosomal protein S12 OS=Hordeum vulgare OX=4513 GN=RPS12 PE=2 SV=1 vvi:100255187 K02951 "RP-S12e, RPS12" small subunit ribosomal protein S12e ko03010 Ribosome KOG3406 40S ribosomal protein S12 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1358 (ribosomal) protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF01248.25 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TRINITY_DN21673_c0_g2_i1 23.06084401 42.8615709 3.26011712 0.076061541 -3.716689027 0.013186024 0.048010796 Down 0.7822422 11.64102 12.92612 3.36E-57 1.467052 3.60E-14 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21675_c0_g1_i3 517.0820051 282.03061 752.1334001 2.666850241 1.415136811 1.19E-29 6.60E-28 Up 14.416 14.72504 16.76974 32.73546 32.46543 33.52406 XP_011086491.1 UDP-glycosyltransferase 74B1 [Sesamum indicum] O48676|U74B1_ARATH UDP-glycosyltransferase 74B1 OS=Arabidopsis thaliana OX=3702 GN=UGT74B1 PE=1 SV=1 sind:105168211 K11820 UGT74B1 N-hydroxythioamide S-beta-glucosyltransferase ko00966|ko00380 Glucosinolate biosynthesis|Tryptophan metabolism KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Biological Process: glucosinolate biosynthetic process (GO:0019761);|Biological Process: defense response to bacterium (GO:0042742);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: thiohydroximate beta-D-glucosyltransferase activity (GO:0047251);|Biological Process: defense response by callose deposition in cell wall (GO:0052544);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);|Molecular Function: UDP-glucose: 4-methylthiobutylhydroximate S-glucosyltransferase activity (GO:0102659);|Molecular Function: UDP-glucose:5-methylthiopentylhydroximate S-glucosyltransferase activity (GO:0103099);|Molecular Function: UDP-glucose: 6-methylthiohexylhydroximate S-glucosyltransferase activity (GO:0103100);|Molecular Function: UDP-glucose:7-methylthioheptylhydroximate S-glucosyltransferase activity (GO:0103101);|Molecular Function: UDP-glucose:8-methylthiooctylhydroximate S-glucosyltransferase activity (GO:0103102);|Molecular Function: UDP-glucose: 9-methylthiononylhydroximate S-glucosyltransferase activity (GO:0103103); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN21676_c0_g2_i1 17.53615047 7.814239806 27.25806114 3.488255008 1.802505512 0.003982606 0.017418099 Up 0.8238478 0.4739707 0.375554 1.568349 1.186316 1.935925 XP_011091914.1 vinorine synthase-like [Sesamum indicum] Q70PR7|VINSY_RAUSE Vinorine synthase OS=Rauvolfia serpentina OX=4060 GN=ACT PE=1 SV=2 sind:105172239 K13065 "E2.3.1.133, HCT" shikimate O-hydroxycinnamoyltransferase ko00940|ko00945|ko00941 "Phenylpropanoid biosynthesis|Stilbenoid, diarylheptanoid and gingerol biosynthesis|Flavonoid biosynthesis" -- -- -- -- -- -- -- -- Biological Process: alkaloid metabolic process (GO:0009820);|Molecular Function: vinorine synthase activity (GO:0050636); PF02458.14 Transferase family TRINITY_DN21677_c0_g1_i3 79.81206569 157.0308306 2.593300769 0.016514596 -5.92011449 1.79E-11 3.10E-10 Down 10.68051 4.68492 7.742243 0.07059619 0.1399849 0.07722079 XP_012852789.1 PREDICTED: uncharacterized protein LOC105972386 isoform X1 [Erythranthe guttata] P48522|TCMO_CATRO Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus OX=4058 GN=CYP73A4 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" -- -- TRINITY_DN21681_c0_g1_i2 2146.334271 1376.662224 2916.006318 2.118171231 1.08281922 3.47E-46 3.36E-44 Up 52.79464 45.2946 49.87353 82.81535 85.59107 84.61659 XP_011072067.1 hydroxymethylglutaryl-CoA synthase [Sesamum indicum] P54873|HMCS_ARATH Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana OX=3702 GN=HMGS PE=1 SV=2 sind:105157353 K01641 E2.3.3.10 hydroxymethylglutaryl-CoA synthase ko00900|ko00280|ko00072|ko00650 "Terpenoid backbone biosynthesis|Valine, leucine and isoleucine degradation|Synthesis and degradation of ketone bodies|Butanoate metabolism" KOG1393 Hydroxymethylglutaryl-CoA synthase [I] METABOLISM Lipid transport and metabolism I COG3425 hydroxymethylglutaryl-CoA synthase activity "Molecular Function: hydroxymethylglutaryl-CoA synthase activity (GO:0004421);|Cellular Component: cytosol (GO:0005829);|Biological Process: acetyl-CoA metabolic process (GO:0006084);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: farnesyl diphosphate biosynthetic process, mevalonate pathway (GO:0010142);|Biological Process: sterol biosynthetic process (GO:0016126);|Biological Process: isopentenyl diphosphate biosynthetic process, mevalonate pathway (GO:0019287);" "PF08540.9,PF01154.16,PF08541.9" Hydroxymethylglutaryl-coenzyme A synthase C terminal|Hydroxymethylglutaryl-coenzyme A synthase N terminal|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TRINITY_DN21683_c0_g2_i1 9.741875791 15.39440365 4.089347933 0.265638606 -1.912463259 0.037045637 0.111616395 Down 3.264216 2.916916 1.399124 0.3343692 0.676199 0.6402518 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21684_c0_g1_i6 198.3313536 381.7774502 14.885257 0.038989356 -4.680775857 2.41E-79 4.87E-77 Down 22.30528 24.99095 21.75854 0.8944918 0.5102152 0.7214987 KZV21343.1 hypothetical protein F511_26951 [Dorcoceras hygrometricum] Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: cytosol (GO:0005829);|Biological Process: defense response (GO:0006952);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to chitin (GO:0010200);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: protein autoubiquitination (GO:0051865); -- -- TRINITY_DN21687_c0_g1_i3 450.9896869 51.39015886 850.5892149 16.5515973 4.048898545 3.90E-148 1.73E-145 Up 1.842285 2.13439 1.736645 23.92569 25.54875 26.67344 XP_020554265.1 berberine bridge enzyme-like 18 [Sesamum indicum] A6P6V9|CBDAS_CANSA Cannabidiolic acid synthase OS=Cannabis sativa OX=3483 GN=CBDAS PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: apoplast (GO:0048046);|Molecular Function: FAD binding (GO:0071949);|Molecular Function: cannabidiolate synthase activity (GO:0102779); "PF01565.22,PF08031.11" FAD binding domain|Berberine and berberine like TRINITY_DN21703_c0_g10_i1 21.20984542 42.41969084 0 0 #NAME? 0.000215892 0.001332607 Down 9.968764 6.330038 1.128366 1.20E-104 0 5.73E-107 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21706_c1_g3_i4 76.70275259 115.7404993 37.6650059 0.32542633 -1.619597112 9.53E-08 1.05E-06 Down 6.034916 8.921273 6.530525 1.41966 1.883875 2.350259 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21709_c1_g2_i4 21.22457309 42.06335783 0.385788347 0.009171601 -6.768610646 1.03E-12 1.99E-11 Down 2.131752 2.418372 2.483229 0 0 0.05326907 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21709_c2_g2_i1 85.19152557 161.773918 8.609133119 0.053217065 -4.231967243 1.63E-32 9.99E-31 Down 16.20803 14.52306 12.20023 0.6300002 0.4070768 0.8320922 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21709_c3_g1_i1 67.40020169 128.4300671 6.370336322 0.049601596 -4.333469643 7.33E-27 3.55E-25 Down 5.480782 5.36106 4.478527 0.3086365 0.0514673 0.2680313 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21711_c0_g4_i1 5.146957419 10.29391484 0 0 #NAME? 0.00072729 0.003938191 Down 0.9444693 2.376705 2.944185 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21718_c1_g1_i10 87.52683978 167.9641467 7.089532844 0.042208608 -4.566318935 2.29E-36 1.62E-34 Down 4.5601 5.444161 5.184294 0.2095807 0.1041281 0.2144019 XP_012838750.1 PREDICTED: polyadenylate-binding protein 2-like [Erythranthe guttata] P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=1 gmx:100813735 K13126 PABPC polyadenylate-binding protein ko03018|ko03015|ko03013 RNA degradation|mRNA surveillance pathway|RNA transport KOG0123 Polyadenylate-binding protein (RRM superfamily) [AJ] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING "RNA processing and modification |Translation, ribosomal structure and biogenesis " -- -- -- "Biological Process: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: mRNA 3'-UTR binding (GO:0003730);|Molecular Function: translation initiation factor activity (GO:0003743);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: translational initiation (GO:0006413);|Biological Process: regulation of translational initiation (GO:0006446);|Molecular Function: poly(A) binding (GO:0008143);|Molecular Function: poly(U) RNA binding (GO:0008266);|Biological Process: response to salt stress (GO:0009651);|Biological Process: viral process (GO:0016032);|Biological Process: regulation of nuclear-transcribed mRNA poly(A) tail shortening (GO:0060211);|Biological Process: regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (GO:1900151);|Cellular Component: ribonucleoprotein complex (GO:1990904);" -- -- TRINITY_DN21718_c1_g2_i1 6.552700914 13.10540183 0 0 #NAME? 0.001018587 0.005307852 Down 0.3785711 2.239082 3.031795 0 2.59E-18 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21722_c0_g1_i2 20.80176937 29.4427126 12.16082614 0.413033483 -1.275669354 0.033373067 0.102816862 Down 1.511558 1.096385 0.8691674 0.288213 0.6306318 0.259201 XP_012856425.1 PREDICTED: topless-related protein 4 isoform X2 [Erythranthe guttata] Q27GK7|TPR4_ARATH Topless-related protein 4 OS=Arabidopsis thaliana OX=3702 GN=TPR4 PE=1 SV=2 -- -- -- -- -- -- KOG0266 WD40 repeat-containing protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410XP3K Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for "Molecular Function: transcription corepressor activity (GO:0003714);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: negative regulation of gibberellic acid mediated signaling pathway (GO:0009938);|Biological Process: primary shoot apical meristem specification (GO:0010072);|Biological Process: gibberellic acid homeostasis (GO:0010336);|Biological Process: negative regulation of nucleic acid-templated transcription (GO:1903507);" -- -- TRINITY_DN21722_c0_g3_i3 20.19268772 9.414816143 30.97055929 3.289555401 1.71789261 0.00402615 0.017593284 Up 0.1767325 0.8959125 0.6191207 1.394888 2.051807 0.9766008 XP_020548378.1 topless-related protein 4 [Sesamum indicum] Q27GK7|TPR4_ARATH Topless-related protein 4 OS=Arabidopsis thaliana OX=3702 GN=TPR4 PE=1 SV=2 -- -- -- -- -- -- KOG0266 WD40 repeat-containing protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410XP3K Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for "Molecular Function: transcription corepressor activity (GO:0003714);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: negative regulation of gibberellic acid mediated signaling pathway (GO:0009938);|Biological Process: primary shoot apical meristem specification (GO:0010072);|Biological Process: gibberellic acid homeostasis (GO:0010336);|Biological Process: negative regulation of nucleic acid-templated transcription (GO:1903507);" PF00400.31 "WD domain, G-beta repeat" TRINITY_DN21724_c1_g2_i1 26.30497583 48.22093724 4.389014417 0.091018853 -3.457690778 6.41E-09 8.28E-08 Down 2.745782 4.203239 3.567193 0.506048 0.2502034 1.50E-24 XP_022864884.1 aquaporin TIP1-1-like [Olea europaea var. sylvestris] P25818|TIP11_ARATH Aquaporin TIP1-1 OS=Arabidopsis thaliana OX=3702 GN=TIP1-1 PE=1 SV=1 sind:105169946 K09873 TIP aquaporin TIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Cellular Component: protein storage vacuole (GO:0000326);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: water transport (GO:0006833);|Cellular Component: plant-type vacuole membrane (GO:0009705);|Cellular Component: chloroplast envelope (GO:0009941);|Molecular Function: urea transmembrane transporter activity (GO:0015204);|Molecular Function: water channel activity (GO:0015250);|Biological Process: urea transport (GO:0015840);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: central vacuole (GO:0042807);|Biological Process: hydrogen peroxide transmembrane transport (GO:0080170); -- -- TRINITY_DN21724_c1_g4_i2 20.76585592 41.53171185 0 0 #NAME? 0.001136662 0.005845964 Down 4.834685 3.828596 1.07E-53 6.16E-55 1.63E-39 1.56E-59 KRG96046.1 hypothetical protein GLYMA_19G186100 [Glycine max] Q9FY14|TIP1_MEDTR Probable aquaporin TIP-type OS=Medicago truncatula OX=3880 GN=AQP1 PE=1 SV=1 pvu:PHAVU_001G181100g K09873 TIP aquaporin TIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Molecular Function: channel activity (GO:0015267);|Cellular Component: integral component of membrane (GO:0016021); PF00230.19 Major intrinsic protein TRINITY_DN21724_c2_g1_i1 8.328676648 13.73310167 2.924251628 0.212934536 -2.231518136 0.026294996 0.084659108 Down 1.83175 4.110874 2.394154 0.907247 0.4514034 0 PIN09615.1 Aquaporin (major intrinsic protein family) [Handroanthus impetiginosus] P25818|TIP11_ARATH Aquaporin TIP1-1 OS=Arabidopsis thaliana OX=3702 GN=TIP1-1 PE=1 SV=1 sind:105170758 K09873 TIP aquaporin TIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Cellular Component: protein storage vacuole (GO:0000326);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: water transport (GO:0006833);|Cellular Component: plant-type vacuole membrane (GO:0009705);|Cellular Component: chloroplast envelope (GO:0009941);|Molecular Function: urea transmembrane transporter activity (GO:0015204);|Molecular Function: water channel activity (GO:0015250);|Biological Process: urea transport (GO:0015840);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: central vacuole (GO:0042807);|Biological Process: hydrogen peroxide transmembrane transport (GO:0080170); -- -- TRINITY_DN21735_c0_g2_i2 31.97971325 62.83861978 1.120806715 0.017836272 -5.809042083 6.75E-12 1.21E-10 Down 4.484738 7.001057 3.654318 0.1376542 0.001947389 0.07850331 PIN15726.1 UDP-glucuronosyl and UDP-glucosyl transferase [Handroanthus impetiginosus] Q9T081|U79B3_ARATH UDP-glycosyltransferase 79B3 OS=Arabidopsis thaliana OX=3702 GN=UGT79B3 PE=2 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); -- -- TRINITY_DN21755_c1_g1_i3 526.3269757 712.2166217 340.4373298 0.477996889 -1.064926865 1.14E-17 3.20E-16 Down 83.59186 86.04081 77.34266 38.56582 29.11372 27.5412 XP_011084932.1 probable aquaporin PIP1-2 [Sesamum indicum] Q9XF59|PIP12_MAIZE Aquaporin PIP1-2 OS=Zea mays OX=4577 GN=PIP1-2 PE=1 SV=1 sind:105167068 K09872 PIP aquaporin PIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Cellular Component: vacuole (GO:0005773);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to water deprivation (GO:0009414);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: water channel activity (GO:0015250);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: protein-containing complex (GO:0032991);|Biological Process: protein homotetramerization (GO:0051289);|Biological Process: protein heterotetramerization (GO:0051290); PF00230.19 Major intrinsic protein TRINITY_DN21758_c0_g1_i1 129.0806496 177.5478288 80.61347036 0.454038052 -1.139114882 8.85E-07 8.57E-06 Down 7.106075 8.535848 7.195849 3.582003 2.181927 2.599383 PIN06836.1 hypothetical protein CDL12_20608 [Handroanthus impetiginosus] Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana OX=3702 GN=IQD1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YG6W IQ calmodulin-binding motif Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874);|Molecular Function: microtubule binding (GO:0008017); -- -- TRINITY_DN21759_c1_g10_i1 7.650592233 14.57671399 0.724470471 0.049700534 -4.330594834 0.000711212 0.003857575 Down 2.701593 2.608804 1.065071 1.07E-10 0.2375444 0.004267394 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21759_c1_g1_i1 424.8696619 596.3595933 253.3797305 0.424877429 -1.234881392 4.67E-20 1.53E-18 Down 72.2777 78.50979 75.77099 27.9603 24.13157 25.51907 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21759_c1_g2_i1 14.80065053 5.64889665 23.95240442 4.240191651 2.084129474 0.033020564 0.101917622 Up 0.9529076 0.9247655 1.5308 6.678549 3.418763 1.752179 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21759_c1_g3_i1 45.57380816 30.38209924 60.76551709 2.000043401 1.000031307 0.006950114 0.028078188 Up 2.434512 1.016638 1.198336 1.99835 2.421924 3.024935 PIN09215.1 Acyl-CoA reductase [Handroanthus impetiginosus] Q39152|FACR1_ARATH Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1 pop:POPTR_0009s14740g K13356 FAR alcohol-forming fatty acyl-CoA reductase ko00073|ko04146 "Cutin, suberine and wax biosynthesis|Peroxisome" KOG1221 Acyl-CoA reductase [I] METABOLISM Lipid transport and metabolism S ENOG410XS7R fatty-acyl-CoA reductase (alcohol-forming) activity Cellular Component: plasma membrane (GO:0005886);|Biological Process: lipid metabolic process (GO:0006629);|Cellular Component: chloroplast (GO:0009507);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to salt stress (GO:0009651);|Biological Process: suberin biosynthetic process (GO:0010345);|Biological Process: long-chain fatty-acyl-CoA metabolic process (GO:0035336);|Molecular Function: long-chain-fatty-acyl-CoA reductase activity (GO:0050062);|Molecular Function: fatty-acyl-CoA reductase (alcohol-forming) activity (GO:0080019);|Molecular Function: alcohol-forming fatty acyl-CoA reductase activity (GO:0102965); PF07993.11 Male sterility protein TRINITY_DN21759_c1_g8_i3 65.2968154 41.75351036 88.84012044 2.127728176 1.089313854 0.000971992 0.005089588 Up 1.942002 3.613835 4.544166 6.610458 6.162287 4.579669 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21766_c0_g1_i3 40.84095307 26.49248625 55.18941988 2.083210286 1.058808477 0.008016325 0.031658695 Up 0.6594695 0.8204424 0.6719311 1.237562 1.35164 1.037122 XP_022895989.1 "pentatricopeptide repeat-containing protein At1g62260, mitochondrial [Olea europaea var. sylvestris]" O04590|PPR88_ARATH "Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E10 PE=2 SV=1" -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- "PF01535.19,PF13041.5,PF12854.6,PF13812.5,PF14559.5,PF17177.3,PF13428.5" PPR repeat|PPR repeat family|PPR repeat|Pentatricopeptide repeat domain|Tetratricopeptide repeat|Pentacotripeptide-repeat region of PRORP|Tetratricopeptide repeat TRINITY_DN21772_c0_g2_i1 777.1095303 1539.026047 15.19301406 0.009871837 -6.662465731 4.80E-71 8.35E-69 Down 306.0883 394.7674 291.1012 5.526005 0.7765014 1.539884 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21772_c0_g3_i1 1358.12647 2185.822852 530.4300884 0.242668379 -2.042941964 5.35E-47 5.28E-45 Down 327.0585 278.3772 312.6437 45.2962 63.3592 71.37673 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21772_c3_g1_i3 11721.08285 20245.2591 3196.906599 0.1579089 -2.662835606 3.70E-132 1.39E-129 Down 814.8005 810.6045 712.0939 99.83828 97.70559 100.2605 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21772_c3_g2_i1 16.17669457 7.334124797 25.01926434 3.411349688 1.770342649 0.006039716 0.02489203 Up 0.6180079 0.8075887 0.2102829 1.700495 0.9522796 1.851001 XP_011077973.1 potassium channel AKT1-like isoform X1 [Sesamum indicum] Q38998|AKT1_ARATH Potassium channel AKT1 OS=Arabidopsis thaliana OX=3702 GN=AKT1 PE=1 SV=2 -- -- -- -- -- -- KOG0498 "K+-channel ERG and related proteins, contain PAS/PAC sensor domain" [PT] METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Signal transduction mechanisms U ENOG410XPSE "Potassium voltage-gated channel, subfamily H (Eag-related), member" Molecular Function: inward rectifier potassium channel activity (GO:0005242);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: potassium ion transport (GO:0006813);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to salt stress (GO:0009651);|Biological Process: potassium ion import (GO:0010107);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: regulation of ion transmembrane transport (GO:0034765);|Molecular Function: identical protein binding (GO:0042802);|Biological Process: root hair elongation (GO:0048767);|Biological Process: regulation of stomatal closure (GO:0090333); PF11834.7 "KHA, dimerisation domain of potassium ion channel" TRINITY_DN21772_c3_g3_i4 44.2422587 62.44147541 26.04304198 0.417079222 -1.261606653 0.001175756 0.006022465 Down 7.047494 10.82992 9.677171 2.95363 2.886354 3.294216 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21773_c0_g4_i1 9.483522682 14.84359642 4.123448942 0.277793119 -1.847917233 0.042752237 0.125138785 Down 2.248792 2.205099 1.430837 0.4306677 0.2791565 0.612114 XP_022867834.1 uncharacterized protein LOC111387505 [Olea europaea var. sylvestris] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" -- -- TRINITY_DN21774_c0_g1_i1 78.954954 135.0696883 22.84021966 0.169099521 -2.564055518 2.67E-09 3.62E-08 Down 6.606683 9.115284 5.380954 0.7523601 0.7538972 1.378533 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21774_c1_g3_i3 89.91950252 140.4160938 39.42291121 0.280757783 -1.832602078 1.56E-10 2.43E-09 Down 8.193827 9.985506 8.243312 2.278931 2.576655 1.125471 PIN22633.1 hypothetical protein CDL12_04651 [Handroanthus impetiginosus] Q9MA63|Y3550_ARATH REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111R2E Rubber elongation factor Cellular Component: vacuole (GO:0005773);|Cellular Component: lipid droplet (GO:0005811);|Biological Process: lipid storage (GO:0019915);|Biological Process: lipid droplet organization (GO:0034389);|Biological Process: positive regulation of growth (GO:0045927);|Biological Process: developmental vegetative growth (GO:0080186);|Biological Process: positive regulation of response to water deprivation (GO:1902584); "PF05755.11,PF13763.5" Rubber elongation factor protein (REF)|Domain of unknown function (DUF4167) TRINITY_DN21787_c0_g1_i2 227.0191099 369.5870712 84.45114873 0.228501361 -2.129725337 2.50E-30 1.42E-28 Down 24.753 25.76017 23.12371 4.391788 3.340387 5.857026 XP_011098413.1 fatty-acid-binding protein 1-like [Sesamum indicum] Q9M1X2|FAP1_ARATH Fatty-acid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=FAP1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410Y9JB chalcone isomerase Molecular Function: fatty acid binding (GO:0005504);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: fatty acid metabolic process (GO:0006631);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid (GO:0009536);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: chloroplast envelope (GO:0009941);|Molecular Function: intramolecular lyase activity (GO:0016872); PF16036.4 Chalcone isomerase-like TRINITY_DN21790_c0_g1_i1 44.71064816 61.49396152 27.9273348 0.454147596 -1.138766851 0.003273112 0.014713444 Down 3.611786 3.848667 6.164409 1.209689 1.788154 1.937299 XP_011089529.1 trans-cinnamate 4-monooxygenase [Sesamum indicum] Q9ZT91|EFTM_ARATH "Elongation factor Tu, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=TUFA PE=1 SV=1" sind:105170466 K00487 CYP73A trans-cinnamate 4-monooxygenase ko00130|ko00945|ko00940|ko00360|ko00941 "Ubiquinone and other terpenoid-quinone biosynthesis|Stilbenoid, diarylheptanoid and gingerol biosynthesis|Phenylpropanoid biosynthesis|Phenylalanine metabolism|Flavonoid biosynthesis" KOG0460 Mitochondrial translation elongation factor Tu [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0050 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity) Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: ATP binding (GO:0005524);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cell wall (GO:0005618);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: translational elongation (GO:0006414);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: response to cadmium ion (GO:0046686);|Molecular Function: cobalt ion binding (GO:0050897); PF00067.21 Cytochrome P450 TRINITY_DN21792_c1_g2_i1 92.24115872 183.0333765 1.448940942 0.007916266 -6.980964148 2.20E-51 2.48E-49 Down 13.21352 14.01013 12.75198 0 0.2253515 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21792_c2_g1_i1 79.77177496 120.2773772 39.26617273 0.326463493 -1.615006423 4.69E-08 5.42E-07 Down 4.413542 5.727488 4.965647 1.34896 0.8664191 1.759207 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21792_c3_g1_i1 28.61864173 42.0084297 15.22885375 0.362518996 -1.463871501 0.008014973 0.03165611 Down 2.725067 4.088643 6.371198 0.8694877 1.611775 1.43778 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21792_c3_g2_i1 38.67541997 52.10011112 25.25072881 0.484657869 -1.044961421 0.014054861 0.050598223 Down 5.134932 5.48295 4.028201 2.320409 1.612356 1.783356 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21792_c3_g4_i1 17.05272828 34.10545656 0 0 #NAME? 2.78E-11 4.72E-10 Down 1.335705 2.286642 1.56073 2.79E-22 1.55E-31 9.02E-22 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21795_c3_g3_i1 37.87780102 60.51092644 15.2446756 0.251932609 -1.988890222 0.000313029 0.001860587 Down 4.372681 5.506809 9.074805 1.12392 1.356759 1.424116 AOR08328.1 Tsw [Capsicum chinense] O64790|DRL17_ARATH Probable disease resistance protein At1g61300 OS=Arabidopsis thaliana OX=3702 GN=At1g61300 PE=2 SV=2 spen:107010246 K13459 RPS2 disease resistance protein RPS2 ko04626 Plant-pathogen interaction KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat -- PF00931.21 NB-ARC domain TRINITY_DN21795_c3_g4_i1 13.55127963 20.74277083 6.359788424 0.306602646 -1.705557947 0.018349684 0.063111622 Down 2.952705 1.336311 3.263248 0.7851945 0.3064519 0.7988022 PHU06031.1 hypothetical protein BC332_26853 [Capsicum chinense] Q940K0|DRL15_ARATH Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana OX=3702 GN=At1g61180 PE=2 SV=2 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat -- PF00931.21 NB-ARC domain TRINITY_DN21797_c1_g1_i1 9.599348724 0 19.19869745 Inf Inf 0.000675074 0.003684903 Up 1.69E-41 0 1.18E-26 5.516686 1.867416 1.338894 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21801_c0_g2_i1 18.31616768 36.63233535 0 0 #NAME? 4.77E-12 8.67E-11 Down 3.717038 3.852787 3.163286 0 0 0 XP_020553018.1 uncharacterized protein LOC105172512 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111K31 expressed protein -- -- -- TRINITY_DN21801_c0_g3_i1 16.57341009 33.14682017 0 0 #NAME? 5.42E-11 8.90E-10 Down 5.985462 4.221286 5.085633 0 0 0 PIN21389.1 hypothetical protein CDL12_05904 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21807_c0_g2_i10 42.06388721 65.17426529 18.95350913 0.290812778 -1.781837435 1.62E-05 0.000126044 Down 6.091312 5.770302 5.638276 1.173658 1.4717 1.428437 XP_022845800.1 uncharacterized protein LOC111368658 isoform X1 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XP5A Glycine-rich protein -- -- -- TRINITY_DN2180_c0_g1_i1 7.281016537 1.968312365 12.59372071 6.398232788 2.677673483 0.020040278 0.067922671 Up 0 0 1.146937 1.362397 2.702795 1.916108 XP_012836563.1 PREDICTED: putative late blight resistance protein homolog R1A-10 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21817_c0_g1_i4 25.84059392 50.93316426 0.748023582 0.014686376 -6.089377785 1.32E-14 2.96E-13 Down 3.259888 2.948352 4.664747 0 0.06931496 0.08504846 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21817_c0_g2_i1 6.476447445 12.95289489 0 0 #NAME? 0.000115967 0.000757644 Down 1.359075 0.6134372 1.185266 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21820_c0_g3_i1 23.40863484 34.50176034 12.31550934 0.356953072 -1.486193677 0.009572132 0.036737356 Down 1.605605 3.092167 1.587779 0.8142081 0.3415362 0.7105038 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21821_c1_g1_i1 19.7580461 38.78107383 0.735018369 0.018953017 -5.721428637 8.40E-11 1.35E-09 Down 8.549562 5.481701 5.973333 0.3018924 5.87E-54 4.69E-51 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21821_c2_g1_i1 69.34841595 108.5648013 30.13203059 0.277548802 -1.849186626 3.76E-05 0.000273074 Down 10.09659 15.68273 9.010044 1.528842 3.269833 3.055632 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21821_c4_g1_i1 13.86578232 26.2615279 1.470036737 0.055976817 -4.15902674 3.23E-06 2.85E-05 Down 3.580805 2.783277 2.944167 0.3698015 0 3.21E-25 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21821_c4_g2_i1 52.08143069 71.83632358 32.3265378 0.450002675 -1.151994516 0.001582667 0.007833606 Down 11.02111 11.00205 9.117008 2.527116 4.624197 4.071798 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21821_c4_g4_i1 19.71669162 39.43338324 0 0 #NAME? 6.47E-13 1.27E-11 Down 6.024264 11.45488 7.232379 6.43E-24 2.41E-59 1.28E-73 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21821_c4_g5_i1 158.3532245 87.43583256 229.2706163 2.622158555 1.390754924 0.004882982 0.020771551 Up 18.15422 9.814581 14.45495 18.26862 40.66549 30.74766 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21821_c4_g6_i1 54.87751521 103.4163378 6.338692629 0.061292952 -4.028135 7.02E-21 2.43E-19 Down 15.17872 17.74587 22.62449 0.5270774 1.028421 1.142362 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21823_c0_g1_i1 9.367763116 16.5044607 2.231065533 0.135179548 -2.887051202 0.003253947 0.014647602 Down 2.781258 3.726037 2.390139 0.2609657 0.2580834 0.3088629 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21832_c0_g5_i1 17.12362349 8.705301584 25.54194539 2.934067837 1.552902227 0.014729083 0.052604034 Up 0.8283583 0.6707862 0.7837222 1.419217 2.310558 1.579363 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21835_c0_g1_i6 57.98212767 112.2554218 3.708833535 0.033039237 -4.919675801 2.62E-26 1.23E-24 Down 5.336765 6.057466 4.909268 0.1215405 0.1802665 0.1288052 XP_010421110.1 "PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Camelina sativa]" O82660|P2SAF_ARATH "Photosystem II stability/assembly factor HCF136, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF136 PE=1 SV=1" -- -- -- -- -- -- KOG3511 Sortilin and related receptors [R] POORLY CHARACTERIZED General function prediction only S COG4447 "The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity" Cellular Component: chloroplast (GO:0009507);|Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast stromal thylakoid (GO:0009533);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: thylakoid (GO:0009579);|Biological Process: plastid organization (GO:0009657);|Biological Process: response to cytokinin (GO:0009735);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: thylakoid lumen (GO:0031977);|Biological Process: response to cadmium ion (GO:0046686); -- -- TRINITY_DN21835_c0_g2_i1 10.14294929 20.28589859 0 0 #NAME? 2.16E-06 1.96E-05 Down 5.092096 2.998438 1.965795 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21847_c1_g2_i2 61.84059117 93.1422676 30.53891474 0.327873859 -1.608787212 2.34E-06 2.12E-05 Down 1.906606 2.168675 1.512573 0.3564578 0.5375302 0.5947448 XP_019163484.1 PREDICTED: uncharacterized protein LOC109159828 [Ipomoea nil] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" PF00665.25 Integrase core domain TRINITY_DN21847_c1_g3_i1 31.66160707 50.43264357 12.89057056 0.25559974 -1.968041729 4.44E-05 0.000317153 Down 1.692357 1.234854 1.676377 0.2530975 0.5029019 0.2031504 XP_012844847.1 "PREDICTED: uncharacterized protein LOC105964883, partial [Erythranthe guttata]" Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" -- -- TRINITY_DN21849_c0_g3_i5 82.19938925 164.3987785 0 0 #NAME? 2.86E-51 3.21E-49 Down 13.52693 14.37586 12.35186 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21851_c0_g2_i1 445.2374367 621.5811078 268.8937656 0.432596426 -1.208906349 8.50E-20 2.74E-18 Down 57.93762 55.934 55.21806 19.31463 22.77009 16.91111 XP_011072673.1 17.4 kDa class III heat shock protein [Sesamum indicum] Q9SYG1|HS174_ARATH 17.4 kDa class III heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4B PE=2 SV=1 sind:105157869 K13993 HSP20 HSP20 family protein ko04141 Protein processing in endoplasmic reticulum KOG0710 Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0071 response to heat Biological Process: response to reactive oxygen species (GO:0000302);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein folding (GO:0006457);|Biological Process: response to heat (GO:0009408);|Biological Process: response to high light intensity (GO:0009644);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to hydrogen peroxide (GO:0042542);|Molecular Function: protein self-association (GO:0043621);|Molecular Function: unfolded protein binding (GO:0051082);|Biological Process: protein complex oligomerization (GO:0051259); -- -- TRINITY_DN21855_c1_g1_i13 45.22966458 69.12288793 21.33644123 0.308674042 -1.695843929 2.60E-05 0.000194265 Down 4.876304 2.848345 4.836027 1.007631 0.6924775 1.447948 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21855_c1_g2_i1 51.19636397 89.26260233 13.13012561 0.147095483 -2.765175149 0.001787113 0.008723778 Down 15.63052 8.901265 5.479342 1.698055 1.857029 4.19E-23 XP_011074043.1 uncharacterized protein LOC105158848 isoform X1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YF33 "Protein of unknown function, DUF547" -- -- -- TRINITY_DN21855_c1_g3_i1 20.90724085 41.81448169 0 0 #NAME? 6.00E-06 5.05E-05 Down 2.171944 7.681294 10.6607 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21855_c1_g4_i1 14.09951515 28.19903031 0 0 #NAME? 0.000849044 0.004517717 Down 9.04476 1.323688 4.131936 0 0 0 XP_011074045.1 uncharacterized protein LOC105158848 isoform X3 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21856_c0_g1_i9 248.2933987 338.4975235 158.0892738 0.467032291 -1.098405793 1.25E-10 1.97E-09 Down 23.11666 18.60701 20.09064 7.975789 7.970463 7.302911 RLW30371.1 bzip transcription factor 44 [Quercus suber] C0Z2L5|BZP44_ARATH bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YNBU ocs element-binding factor 1 "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: seed germination (GO:0009845);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Molecular Function: protein heterodimerization activity (GO:0046982);" "PF00170.20,PF07716.14" bZIP transcription factor|Basic region leucine zipper TRINITY_DN21858_c0_g1_i3 518.2011572 810.2769376 226.1253767 0.279071718 -1.841292172 3.57E-47 3.57E-45 Down 41.81474 39.31621 39.63228 9.364543 8.305988 9.533046 XP_011072241.1 uncharacterized protein LOC105157533 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- E COG1794 aspartate racemase -- PF01177.21 Asp/Glu/Hydantoin racemase TRINITY_DN21879_c0_g1_i5 119.5780938 170.142206 69.0139816 0.40562529 -1.301780491 4.95E-08 5.69E-07 Down 2.443997 2.223768 2.815629 0.8424218 0.8379548 0.7600701 CAN61004.1 hypothetical protein VITISV_015023 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF07727.13,PF13976.5,PF00665.25,PF03732.16" Reverse transcriptase (RNA-dependent DNA polymerase)|GAG-pre-integrase domain|Integrase core domain|Retrotransposon gag protein TRINITY_DN21881_c0_g1_i2 93.4300139 124.9120259 61.94800186 0.495933049 -1.011782725 0.000154762 0.000986122 Down 7.718518 6.585696 7.925944 2.990207 3.152607 2.753824 XP_011096186.1 protein ODORANT1 [Sesamum indicum] Q9LDR8|MY102_ARATH Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1 sind:105175448 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: defense response (GO:0006952);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);" "PF00249.30,PF13921.5" Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN21884_c0_g1_i1 40.00843902 71.57015938 8.446718657 0.118020118 -3.082895289 3.33E-11 5.60E-10 Down 7.342121 6.141715 7.471825 0.3624544 1.258242 0.3661384 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21887_c0_g1_i9 499.1153697 311.5652611 686.6654783 2.203921823 1.14007305 8.47E-20 2.73E-18 Up 13.24543 14.23968 14.19196 23.99068 24.91424 25.20054 PIN22806.1 hypothetical protein CDL12_04478 [Handroanthus impetiginosus] Q9FN11|LBD37_ARATH LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111JGS lob domain-containing protein Biological Process: nitrogen compound metabolic process (GO:0006807);|Biological Process: simple leaf morphogenesis (GO:0060776); -- -- TRINITY_DN21889_c0_g2_i4 16.29665334 28.96568038 3.627626304 0.125238774 -2.997246802 0.001072249 0.005556233 Down 3.557239 5.458667 1.909033 0.1571033 0.9382107 1.19E-13 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21891_c0_g1_i1 640.0589868 255.9867106 1024.131263 4.000720431 2.000259817 1.75E-65 2.70E-63 Up 3.907901 3.381239 3.792339 11.96517 11.89642 11.89316 XP_012834887.1 PREDICTED: ABC transporter B family member 4-like [Erythranthe guttata] O80725|AB4B_ARATH ABC transporter B family member 4 OS=Arabidopsis thaliana OX=3702 GN=ABCB4 PE=1 SV=1 sind:105165179 K05658 ABCB1 "ATP-binding cassette, subfamily B (MDR/TAP), member 1" ko02010 ABC transporters KOG0055 "Multidrug/pheromone exporter, ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1132 (ABC) transporter Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: xenobiotic transmembrane transporting ATPase activity (GO:0008559);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: gravitropism (GO:0009630);|Biological Process: response to auxin (GO:0009733);|Biological Process: auxin-activated signaling pathway (GO:0009734);|Biological Process: response to cytokinin (GO:0009735);|Biological Process: auxin polar transport (GO:0009926);|Biological Process: auxin efflux (GO:0010315);|Molecular Function: auxin influx transmembrane transporter activity (GO:0010328);|Molecular Function: auxin efflux transmembrane transporter activity (GO:0010329);|Biological Process: basipetal auxin transport (GO:0010540);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: root hair elongation (GO:0048767);|Biological Process: auxin influx (GO:0060919); "PF00664.22,PF00005.26,PF02463.18,PF13555.5,PF13191.5,PF13401.5,PF03193.15,PF09818.8,PF06414.11" ABC transporter transmembrane region|ABC transporter|RecF/RecN/SMC N terminal domain|P-loop containing region of AAA domain|AAA ATPase domain|AAA domain|RsgA GTPase|Predicted ATPase of the ABC class|Zeta toxin TRINITY_DN21894_c0_g2_i4 23.43510048 46.87020096 0 0 #NAME? 2.03E-15 4.83E-14 Down 1.700926 2.042241 2.563961 0 0 0 CAN83392.1 hypothetical protein VITISV_041406 [Vitis vinifera] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN21902_c2_g2_i13 108.9458314 217.8916628 0 0 #NAME? 1.69E-67 2.71E-65 Down 12.63308 10.52923 12.23838 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21902_c2_g3_i4 45.01642084 63.86957684 26.16326485 0.409635794 -1.28758631 0.001100101 0.005679162 Down 5.409716 4.303784 3.531659 1.182794 1.286009 1.984991 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21904_c1_g3_i2 10.7183835 21.43676699 0 0 #NAME? 0.002410152 0.011307911 Down 0.000271168 5.971204 6.163262 8.79E-61 5.63E-64 1.35E-50 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21904_c1_g4_i1 12.13442583 24.26885167 0 0 #NAME? 3.17E-08 3.76E-07 Down 3.676688 2.864355 3.485415 1.04E-67 0 0 PIN14499.1 GYF domain containing protein [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21904_c1_g5_i2 19.44768984 38.89537968 0 0 #NAME? 1.19E-05 9.56E-05 Down 4.863859 10.76879 3.161728 0 0 0 EPS73607.1 "hypothetical protein M569_01148, partial [Genlisea aurea]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41120EC GYF domain-containing protein -- -- -- TRINITY_DN21906_c1_g2_i11 49.20358345 67.82324394 30.58392296 0.450935714 -1.149006318 0.002349289 0.011056639 Down 3.156914 2.410113 1.995581 1.086417 0.6264735 1.06617 XP_011070060.1 putative methyltransferase At1g22800 isoform X1 [Sesamum indicum] O80543|Y1280_ARATH "Putative methyltransferase At1g22800, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g22800 PE=1 SV=2" sind:105155801 K18162 NDUFAF5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 -- -- KOG2940 Predicted methyltransferase [R] POORLY CHARACTERIZED General function prediction only Q COG0500 Methyltransferase Cellular Component: mitochondrion (GO:0005739);|Molecular Function: methyltransferase activity (GO:0008168); "PF08241.11,PF13649.5" Methyltransferase domain|Methyltransferase domain TRINITY_DN21922_c0_g2_i2 30.05790722 40.94666268 19.16915175 0.468149307 -1.094959373 0.01965111 0.066848235 Down 2.982494 5.574152 5.585818 1.403453 2.751024 1.162645 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21922_c0_g3_i1 10.09654235 20.1930847 0 0 #NAME? 6.93E-05 0.000475519 Down 2.348117 1.910648 5.718029 0 0 1.72E-98 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21922_c1_g2_i1 27.96773969 55.93547937 0 0 #NAME? 2.84E-18 8.31E-17 Down 3.8178 4.045679 5.523914 0 0 0 XP_012839459.1 PREDICTED: uncharacterized protein LOC105959844 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21922_c1_g3_i1 24.72310518 49.44621037 0 0 #NAME? 6.10E-16 1.51E-14 Down 4.461547 5.07125 2.895951 0 0 0 XP_012842365.1 PREDICTED: uncharacterized protein LOC105962598 [Erythranthe guttata] -- -- sind:105173771 K01188 E3.2.1.21 beta-glucosidase ko00940|ko00460|ko00500 Phenylpropanoid biosynthesis|Cyanoamino acid metabolism|Starch and sucrose metabolism -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21926_c0_g1_i2 697.4363657 291.6735813 1103.19915 3.782307418 1.919266627 1.20E-65 1.86E-63 Up 17.60006 17.63556 15.17582 48.41004 50.43037 55.20877 XP_011070351.1 SPX domain-containing protein 1 [Sesamum indicum] O48781|SPX2_ARATH SPX domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SPX2 PE=2 SV=1 -- -- -- -- -- -- KOG1161 "Protein involved in vacuolar polyphosphate accumulation, contains SPX domain" [P] METABOLISM Inorganic ion transport and metabolism P COG5036 Vacuolar transporter chaperone Cellular Component: nucleus (GO:0005634);|Biological Process: cellular response to phosphate starvation (GO:0016036); PF03105.18 SPX domain TRINITY_DN21929_c0_g1_i5 70.1850979 97.6022529 42.76794289 0.438186022 -1.190384633 0.000130304 0.000844019 Down 4.442739 4.254442 4.248093 1.237494 1.672223 1.67799 PIN03837.1 Tub family protein [Handroanthus impetiginosus] Q9S9M8|TLP8_ARATH Tubby-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=TULP8 PE=2 SV=1 -- -- -- -- -- -- KOG2502 Tub family proteins [R] POORLY CHARACTERIZED General function prediction only S ENOG410XQFT tubby like protein Molecular Function: phosphatidylinositol binding (GO:0035091); PF01167.17 Tub family TRINITY_DN21941_c0_g1_i23 185.6064606 321.1090072 50.10391407 0.156033973 -2.680067919 2.33E-36 1.64E-34 Down 17.11797 14.76895 13.60656 2.118537 1.158134 2.450741 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21941_c0_g2_i1 112.6287638 171.3616468 53.89588077 0.314515423 -1.668797332 1.62E-10 2.52E-09 Down 17.78964 21.47056 18.20979 7.572665 2.635133 4.313816 XP_012845073.1 PREDICTED: protein S-acyltransferase 10 [Erythranthe guttata] Q7XA86|ZDH11_ARATH Protein S-acyltransferase 10 OS=Arabidopsis thaliana OX=3702 GN=PAT10 PE=1 SV=1 sind:105178209 K18932 ZDHHC palmitoyltransferase -- -- -- -- -- -- -- S COG5273 "Zinc finger, DHHC-type containing" Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: Golgi apparatus (GO:0005794);|Biological Process: protein targeting to membrane (GO:0006612);|Biological Process: response to salt stress (GO:0009651);|Cellular Component: plant-type vacuole membrane (GO:0009705);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: peptidyl-L-cysteine S-palmitoylation (GO:0018230);|Molecular Function: protein-cysteine S-palmitoyltransferase activity (GO:0019706);|Biological Process: plant organ development (GO:0099402); -- -- TRINITY_DN21944_c0_g1_i1 4.622267199 0.651223126 8.593311273 13.19564821 3.721990317 0.012245648 0.045086071 Up 0.3299302 0 0.000324751 0.6967784 1.01352 1.358702 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21944_c2_g1_i1 529.7123179 269.6079933 789.8166425 2.929500097 1.550654498 7.45E-37 5.32E-35 Up 14.89202 13.03056 11.40659 30.9012 31.65098 30.44896 ALR74645.1 gibberellin biosynthesis-related protein GA2ox7 [Salvia miltiorrhiza] Q9SQ80|G2OX1_PEA Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum OX=3888 GN=GA2OX1 PE=1 SV=1 sind:105176874 K04125 E1.14.11.13 gibberellin 2-oxidase ko00904 Diterpenoid biosynthesis KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: gibberellin biosynthetic process (GO:0009686);|Molecular Function: gibberellin 2-beta-dioxygenase activity (GO:0045543);|Molecular Function: metal ion binding (GO:0046872); "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN21944_c3_g4_i1 25.13227735 5.443423266 44.82113144 8.23399711 3.041592942 1.14E-07 1.25E-06 Up 0.507276 0.09357161 0.4375636 2.046263 2.824173 2.053849 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21944_c4_g1_i2 49.7143565 32.51064291 66.91807008 2.058343487 1.041483752 0.00461157 0.019785727 Up 2.71612 4.301548 2.830167 6.977491 5.502751 3.803662 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21946_c0_g1_i1 50.24697702 98.58329148 1.910662571 0.019381201 -5.689198229 5.73E-26 2.64E-24 Down 5.85732 6.935846 6.270036 0.07604979 7.34E-55 0.2433122 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21946_c1_g1_i1 115.19653 167.6889441 62.70411603 0.373931128 -1.419155521 1.91E-06 1.75E-05 Down 30.98993 36.38649 22.57009 9.991913 8.821903 8.250099 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21946_c1_g2_i3 38.6886009 19.80802578 57.56917603 2.906356074 1.539211466 0.000278907 0.001676658 Up 1.064257 1.960936 1.721828 2.989925 4.347922 3.89988 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21946_c1_g6_i1 19.62458333 28.54501273 10.70415393 0.374992088 -1.415067937 0.019493088 0.06638792 Down 3.087332 4.444207 3.297803 1.176894 1.300869 0.7039751 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21946_c1_g7_i1 10.82888091 17.53958682 4.118174993 0.234793159 -2.090537722 0.013995498 0.05045248 Down 2.059307 6.151041 3.22617 0.5109385 0.5007481 1.035435 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21946_c1_g8_i1 24.8523147 33.75903644 15.94559296 0.472335547 -1.08211598 0.040466031 0.119744103 Down 5.111555 2.842149 3.963852 1.246323 1.896941 1.500996 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21950_c0_g4_i1 23.14916133 14.39940548 31.89891718 2.215294042 1.147498205 0.030828315 0.096362021 Up 1.676159 1.506721 1.320227 1.880906 3.472691 2.662035 XP_012842245.1 PREDICTED: transcription factor TCP2-like isoform X2 [Erythranthe guttata] Q9T0A4|NDHS_ARATH "NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhS PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- K ENOG410YEYG Transcription factor Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthetic electron transport chain (GO:0009767);|Cellular Component: NAD(P)H dehydrogenase complex (plastoquinone) (GO:0010598);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: quinone binding (GO:0048038); -- -- TRINITY_DN21951_c2_g1_i4 133.067244 227.7235565 38.41093149 0.16867351 -2.567694681 1.78E-25 7.97E-24 Down 6.546588 8.308542 7.208666 1.097866 0.7253451 1.174587 EYU19109.1 hypothetical protein MIMGU_mgv1a003998mg [Erythranthe guttata] Q7XKV5|BGL11_ORYSJ Beta-glucosidase 11 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU11 PE=3 SV=2 sind:105167539 K01188 E3.2.1.21 beta-glucosidase ko00940|ko00460|ko00500 Phenylpropanoid biosynthesis|Cyanoamino acid metabolism|Starch and sucrose metabolism KOG0626 "Beta-glucosidase, lactase phlorizinhydrolase, and related proteins" [G] METABOLISM Carbohydrate transport and metabolism G COG2723 beta-glucosidase Biological Process: carbohydrate metabolic process (GO:0005975);|Molecular Function: beta-glucosidase activity (GO:0008422);|Molecular Function: scopolin beta-glucosidase activity (GO:0102483); PF00232.17 Glycosyl hydrolase family 1 TRINITY_DN21951_c2_g3_i1 24.08385246 10.5279908 37.63971411 3.575203932 1.838025537 0.005015873 0.02125915 Up 1.497995 1.062119 2.642315 6.963234 2.778144 5.336893 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21954_c1_g1_i3 61.74799338 91.99304651 31.50294025 0.342449146 -1.546038331 3.83E-06 3.34E-05 Down 4.98965 6.817495 6.619598 1.67323 1.915463 1.512899 XP_011096389.1 negative regulator of systemic acquired resistance SNI1 isoform X2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21959_c0_g1_i2 92.25781777 123.2530885 61.26254703 0.49704675 -1.008546544 0.000210561 0.001303776 Down 2.928949 3.50896 2.917638 1.146123 1.35539 1.251123 PON81528.1 "Zinc knuckle CX2CX4HX4C, partial [Trema orientale]" -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- PF14111.5 Domain of unknown function (DUF4283) TRINITY_DN21968_c0_g1_i1 173.5616521 93.20015615 253.923148 2.724492732 1.445987642 5.31E-13 1.05E-11 Up 2.686262 2.985456 2.608191 6.214478 6.139576 5.826634 PIN14696.1 Purple acid phosphatase [Handroanthus impetiginosus] Q9SFU3|PPA15_ARATH Purple acid phosphatase 15 OS=Arabidopsis thaliana OX=3702 GN=PAP15 PE=1 SV=1 -- -- -- -- -- -- KOG1378 Purple acid phosphatase [G] METABOLISM Carbohydrate transport and metabolism S COG1409 "Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes (By similarity)" Molecular Function: acid phosphatase activity (GO:0003993);|Cellular Component: extracellular region (GO:0005576);|Biological Process: seed germination (GO:0009845);|Biological Process: pollen germination (GO:0009846);|Molecular Function: metal ion binding (GO:0046872); "PF00149.27,PF16656.4,PF14008.5" "Calcineurin-like phosphoesterase|Purple acid Phosphatase, N-terminal domain|Iron/zinc purple acid phosphatase-like protein C" TRINITY_DN21973_c0_g5_i1 16.77225109 27.66435523 5.88014695 0.21255319 -2.234104185 0.024231584 0.079166857 Down 2.586703 6.532863 3.192171 2.081617 2.19E-80 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21975_c0_g1_i2 360.6486603 539.8878263 181.4094943 0.336013308 -1.573409724 1.59E-26 7.55E-25 Down 15.98791 16.59492 14.04363 4.178003 4.090066 4.376579 XP_020552718.1 "probable folate-biopterin transporter 9, chloroplastic isoform X1 [Sesamum indicum]" O22780|FBT9_ARATH "Probable folate-biopterin transporter 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33280 PE=3 SV=2" -- -- -- -- -- -- -- -- -- -- -- G ENOG410XRKZ BT1 family Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: chloroplast membrane (GO:0031969); "PF03092.15,PF07690.15" BT1 family|Major Facilitator Superfamily TRINITY_DN21978_c2_g1_i1 9.522204172 16.08887234 2.955536004 0.183700631 -2.444571511 0.009326816 0.035979616 Down 2.708096 1.206877 1.889947 0.2366584 0.4715969 0.2369884 XP_002533312.2 uncharacterized protein LOC8273027 [Ricinus communis] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN21979_c0_g4_i1 26974.56445 36262.27297 17686.85593 0.487748133 -1.035791745 4.04E-79 8.04E-77 Down 2194.662 2192.819 2259.813 886.257 906.0318 823.1543 KZV25427.1 hypothetical protein F511_19807 [Dorcoceras hygrometricum] Q39529|LEC2_CLAKE Agglutinin-2 OS=Cladrastis kentukea OX=38412 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: mannose binding (GO:0005537);|Molecular Function: metal ion binding (GO:0046872); PF00139.18 Legume lectin domain TRINITY_DN21984_c0_g1_i1 36.08851762 20.26109701 51.91593823 2.562345869 1.357465226 0.001940351 0.009374028 Up 1.245647 1.707923 1.887806 3.194717 3.771895 3.138491 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21995_c0_g1_i5 33.82861753 46.49093955 21.1662955 0.455277861 -1.135180789 0.010383066 0.039266727 Down 1.796457 1.686978 2.063272 0.6340128 0.7392127 0.6813854 XP_020549061.1 phosphatidylinositol 4-kinase gamma 3 [Sesamum indicum] Q9FNF8|P4KG3_ARATH Phosphatidylinositol 4-kinase gamma 3 OS=Arabidopsis thaliana OX=3702 GN=PI4KG3 PE=2 SV=1 -- -- -- -- -- -- KOG2381 Phosphatidylinositol 4-kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XP06 Phosphatidylinositol 4-kinase type Molecular Function: 1-phosphatidylinositol 4-kinase activity (GO:0004430);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: peroxisome (GO:0005777);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: regulation of flower development (GO:0009909);|Molecular Function: kinase activity (GO:0016301);|Molecular Function: phosphatidylinositol binding (GO:0035091);|Biological Process: response to salt (GO:1902074); "PF00454.26,PF00240.22,PF11976.7" Phosphatidylinositol 3- and 4-kinase|Ubiquitin family|Ubiquitin-2 like Rad60 SUMO-like TRINITY_DN21997_c0_g1_i2 14.47324055 22.24801056 6.698470548 0.301081777 -1.731772705 0.015843256 0.05584508 Down 4.421355 3.050403 3.281176 0.9811092 0.6472409 0.9659721 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21997_c2_g2_i1 11.67832112 17.80534815 5.551294089 0.311776779 -1.681414616 0.039444254 0.117278643 Down 1.597813 2.89906 1.403009 2.88E-31 0.9976755 0.5093918 XP_012848718.1 PREDICTED: protein MOR1 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN21999_c2_g1_i2 39.15437228 23.19892257 55.10982198 2.375533683 1.248251663 0.002977936 0.013570669 Up 1.363099 1.401797 1.712677 2.93029 2.470514 3.144904 PIN10920.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9SCZ4|FERON_ARATH Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- PF12819.6 Carbohydrate-binding protein of the ER TRINITY_DN22006_c0_g1_i1 4.739872836 9.479745673 0 0 #NAME? 0.001719009 0.008431222 Down 1.750905 2.566282 0.6793954 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22008_c0_g1_i3 127.5406586 178.1099157 76.97140158 0.432156746 -1.210373413 2.71E-07 2.83E-06 Down 8.211492 8.789459 6.875876 2.356173 2.945647 2.988727 XP_020549320.1 ERI1 exoribonuclease 2 isoform X2 [Sesamum indicum] Q08I43|ERI1_SCHPO 3'-5' exonuclease eri1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=eri1 PE=1 SV=1 sind:105167754 K18417 ERI2 ERI1 exoribonuclease 2 -- -- KOG0542 Predicted exonuclease [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S COG5018 ERI1 exoribonuclease family member "Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175);|Biological Process: exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000467);|Biological Process: DNA catabolic process, exonucleolytic (GO:0000738);|Molecular Function: double-stranded RNA binding (GO:0003725);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: gene silencing by RNA (GO:0031047);|Molecular Function: double-stranded RNA-specific ribonuclease activity (GO:0032296);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: negative regulation of chromatin silencing by small RNA (GO:0060906);" PF00929.23 Exonuclease TRINITY_DN22011_c0_g1_i7 215.9781351 396.481029 35.47524127 0.089475255 -3.482367436 9.93E-61 1.43E-58 Down 23.115 28.59661 26.45689 2.769818 1.662649 1.162338 OMP06881.1 "Transposase, Tc1-like protein [Corchorus olitorius]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z0Y2 transposon protein -- -- -- TRINITY_DN22011_c0_g2_i1 129.6778663 247.6067052 11.74902737 0.04745036 -4.397437149 6.35E-50 6.93E-48 Down 55.47489 54.56422 48.0213 2.268468 3.049176 0.7462953 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22011_c0_g3_i1 39.42199812 78.84399623 0 0 #NAME? 2.77E-25 1.22E-23 Down 12.81731 13.43815 13.99656 3.22E-12 5.11E-49 3.21E-15 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22012_c0_g1_i3 117.9200825 222.2300387 13.6101264 0.061243415 -4.029301467 1.46E-41 1.23E-39 Down 14.48049 15.14968 13.39284 0.9611128 0.8645134 0.2766602 XP_012834671.1 PREDICTED: short-chain dehydrogenase reductase 3b-like [Erythranthe guttata] O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana OX=3702 GN=SDR3a PE=2 SV=1 -- -- -- -- -- -- KOG0725 Reductases with broad range of substrate specificities [R] POORLY CHARACTERIZED General function prediction only S COG1028 Dehydrogenase reductase Biological Process: plant-type hypersensitive response (GO:0009626);|Molecular Function: oxidoreductase activity (GO:0016491);|Biological Process: defense response to bacterium (GO:0042742); -- -- TRINITY_DN22012_c1_g2_i1 73.37563423 118.0385038 28.7127647 0.243249141 -2.039493382 0.002987087 0.013602814 Down 21.95743 28.48103 11.02681 1.681115 7.531777 2.818779 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22012_c1_g3_i3 37.5999596 70.80035688 4.399562314 0.062140397 -4.008324721 1.71E-14 3.78E-13 Down 7.224404 5.847644 7.569023 0.8787233 0.1650175 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22012_c1_g5_i1 27.56317734 55.12635468 0 0 #NAME? 1.57E-16 4.06E-15 Down 3.41544 5.366836 3.131145 0 0 0 OWM88841.1 hypothetical protein CDL15_Pgr020795 [Punica granatum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22012_c1_g6_i1 11.62882585 23.25765171 0 0 #NAME? 6.88E-08 7.76E-07 Down 3.210182 2.90449 2.941559 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22013_c1_g1_i1 16.57367227 6.471227894 26.67611664 4.122265059 2.043437272 0.001889242 0.009151737 Up 0.3829488 0.6637466 0.4001053 1.793904 1.585764 1.352485 XP_021975346.1 uncharacterized protein LOC110870473 [Helianthus annuus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22013_c1_g5_i1 32.72886364 2.771359031 62.68636824 22.61936022 4.499486219 4.42E-13 8.79E-12 Up 1.394263 3.17E-05 0.2710402 7.022935 10.59241 13.24369 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22013_c3_g1_i1 7.004651048 14.0093021 0 0 #NAME? 5.68E-05 0.000397399 Down 3.026616 1.110115 2.051665 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22015_c0_g1_i1 894.2506443 557.2744506 1231.226838 2.209372485 1.143636668 1.36E-30 7.78E-29 Up 19.86398 17.00356 18.15634 32.78458 32.43425 32.90785 XP_012829547.1 PREDICTED: probable cinnamyl alcohol dehydrogenase 6 [Erythranthe guttata] Q7XWU3|CADH6_ORYSJ Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CAD6 PE=2 SV=2 sind:105165982 K00083 E1.1.1.195 cinnamyl-alcohol dehydrogenase ko00940 Phenylpropanoid biosynthesis KOG0023 "Alcohol dehydrogenase, class V" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " C COG1064 alcohol dehydrogenase Molecular Function: zinc ion binding (GO:0008270);|Biological Process: lignin biosynthetic process (GO:0009809);|Molecular Function: cinnamyl-alcohol dehydrogenase activity (GO:0045551);|Molecular Function: sinapyl alcohol dehydrogenase activity (GO:0052747); "PF00107.25,PF02826.18,PF08240.11" "Zinc-binding dehydrogenase|D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain|Alcohol dehydrogenase GroES-like domain" TRINITY_DN22017_c0_g1_i4 63.60356219 87.04142082 40.16570356 0.461455054 -1.115737959 0.00155036 0.00769215 Down 5.751546 7.509742 5.017255 1.87487 1.47871 3.49351 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22017_c1_g2_i2 61.11489043 89.47280581 32.75697506 0.366110963 -1.449647122 1.55E-05 0.000121315 Down 3.482775 4.396926 3.944666 0.9375808 1.246211 1.320726 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2201_c0_g1_i1 7.554577137 13.60255921 1.506595062 0.110758207 -3.174514497 0.004569078 0.019633107 Down 1.628678 1.548531 1.725979 0.2260022 0 0.23208 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22022_c0_g1_i3 61.67796718 36.70258987 86.65334449 2.360959943 1.239373565 0.000146631 0.000939984 Up 1.026159 2.13522 1.350248 3.106908 3.100633 2.360099 PIN05147.1 Xanthine/uracil transporter [Handroanthus impetiginosus] P93039|NAT4_ARATH Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana OX=3702 GN=NAT4 PE=2 SV=2 sind:105155863 K14611 "SLC23A1_2, SVCT1_2" "solute carrier family 23 (nucleobase transporter), member 1/2" -- -- KOG1292 Xanthine/uracil transporters [F] METABOLISM Nucleotide transport and metabolism F COG2233 permease Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); PF00860.19 Permease family TRINITY_DN22024_c2_g3_i1 25.46850934 48.67712609 2.259892593 0.046426171 -4.428917882 2.38E-11 4.06E-10 Down 5.783012 5.056304 6.114006 0.3368998 0 0.3493676 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22024_c2_g5_i1 17.1435193 34.2870386 0 0 #NAME? 2.26E-08 2.73E-07 Down 5.441936 1.996234 4.474849 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22027_c3_g2_i2 168.3731242 105.854921 230.8913275 2.181205422 1.125125647 1.67E-08 2.05E-07 Up 6.53726 5.467653 5.330436 9.993281 11.40743 9.045343 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF13964.5 Kelch motif TRINITY_DN22032_c2_g1_i1 155.3231133 207.283803 103.3624236 0.498651713 -1.003895587 0.009561116 0.036714978 Down 10.80169 21.8939 17.19461 6.49781 7.712686 5.878165 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22032_c2_g4_i1 7.691780833 15.38356167 0 0 #NAME? 2.05E-05 0.000156798 Down 2.26799 1.998267 2.153797 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22032_c2_g5_i2 23.92882914 36.69178271 11.16587556 0.304315428 -1.716360618 0.001459711 0.007295019 Down 2.243964 1.552816 2.68333 0.6067458 0.3983075 0.5760041 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22032_c2_g8_i1 49.64471648 85.60618991 13.68324305 0.159839412 -2.645304915 8.34E-11 1.34E-09 Down 7.679816 7.780938 4.968412 0.9330748 1.014869 0.7012688 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22038_c1_g1_i5 581.120555 782.2919457 379.9491643 0.485687174 -1.041900707 1.19E-18 3.55E-17 Down 26.98788 27.80172 25.73086 10.31608 10.75596 10.47955 XP_011082771.1 protein DOG1-like 1 isoform X2 [Sesamum indicum] A0SVK0|DOG1_ARATH Protein DELAY OF GERMINATION 1 OS=Arabidopsis thaliana OX=3702 GN=DOG1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Cellular Component: nucleus (GO:0005634);|Biological Process: transcription, DNA-templated (GO:0006351);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: seed dormancy process (GO:0010162);|Biological Process: sugar mediated signaling pathway (GO:0010182);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: regulation of seed dormancy process (GO:2000033);" -- -- TRINITY_DN22038_c1_g2_i3 39.08048829 77.77518824 0.385788347 0.004960301 -7.655356606 1.11E-23 4.54E-22 Down 4.455193 5.690539 6.222717 0 2.04E-77 0.08154705 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22041_c0_g2_i2 79.22605197 144.7632276 13.68887632 0.094560453 -3.40261925 8.96E-19 2.70E-17 Down 9.020806 13.62324 11.89474 1.619355 0.4844473 0.5322554 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22042_c0_g1_i1 22.96061801 12.81503094 33.10620508 2.583388619 1.369264684 0.011884516 0.043966899 Up 1.441183 0.000367194 0.8406175 1.348505 1.672788 1.723579 XP_011075440.1 F-box protein At2g26160-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41116IX F-box domain containing protein -- -- -- TRINITY_DN22044_c0_g1_i2 29.7731506 41.05415438 18.49214682 0.450433022 -1.150615497 0.018240587 0.062783968 Down 3.375425 2.082592 2.374587 1.27889 0.8872281 0.6418999 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22044_c0_g4_i1 24.23167399 32.38698425 16.07636373 0.496383473 -1.010473012 0.048609262 0.138487431 Down 2.061407 4.933947 4.476769 1.061774 1.439828 2.160293 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22044_c0_g7_i1 17.44230594 34.88461189 0 0 #NAME? 9.91E-06 8.02E-05 Down 9.325192 2.314911 5.541157 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22044_c1_g1_i1 15.49721964 28.79993207 2.194507208 0.076198347 -3.714096495 3.70E-06 3.23E-05 Down 3.624258 4.067451 4.249134 0.4464032 0.2211014 2.49E-44 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22049_c1_g2_i1 21.89216518 41.60564501 2.178685362 0.052365138 -4.255249517 1.81E-09 2.50E-08 Down 3.017569 3.312096 3.72456 0.09549629 0.3771524 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22049_c2_g1_i5 241.0345033 337.3359195 144.7330871 0.429047364 -1.220791174 2.29E-11 3.92E-10 Down 10.43657 12.85553 10.22862 3.130926 4.602213 3.852434 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22049_c2_g3_i1 386.4587083 742.5247351 30.39268144 0.040931541 -4.610643217 6.49E-115 2.00E-112 Down 26.03241 22.48849 21.82411 0.7726434 0.8435856 0.6878456 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22049_c2_g6_i1 3.258778122 6.517556244 0 0 #NAME? 0.027627845 0.088218257 Down 0 2.365215 1.519056 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22050_c1_g2_i1 28.97990637 43.56018979 14.39962294 0.330568416 -1.596979205 0.020692197 0.069657406 Down 13.41256 5.760247 7.190073 1.304618 3.895837 1.956532 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22051_c0_g1_i6 103.2743457 187.8607477 18.68794366 0.099477639 -3.329483921 3.95E-29 2.15E-27 Down 6.741487 8.394608 6.139803 0.3788038 0.5606408 0.7837613 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22051_c0_g2_i1 17.70819012 35.41638023 0 0 #NAME? 8.13E-12 1.45E-10 Down 6.282067 4.292963 7.962425 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22055_c0_g1_i1 19.62649154 37.41297983 1.840003238 0.049180879 -4.345758667 1.28E-08 1.60E-07 Down 4.022574 4.438299 2.29319 0.07244216 0.2225771 0.09019013 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22055_c2_g1_i1 6.206899063 10.87064474 1.543153387 0.141956013 -2.816484134 0.021621128 0.072085778 Down 2.664966 1.558211 1.032582 0 0 0.5465218 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22055_c3_g1_i2 12.39792693 22.97412979 1.821724075 0.079294584 -3.656633851 0.000140939 0.000906179 Down 1.115618 2.635054 1.289412 0.143921 0.2141857 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22055_c4_g1_i1 5.194284023 10.38856805 0 0 #NAME? 0.000697018 0.003791004 Down 2.297036 0.9038897 2.925425 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22055_c4_g2_i2 13.88936536 27.77873071 0 0 #NAME? 3.24E-09 4.35E-08 Down 2.313259 2.895362 1.443311 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22055_c4_g3_i1 6.927285903 13.48706262 0.367509184 0.027249016 -5.19765206 0.000414295 0.002392935 Down 0.946291 2.371466 1.257668 0.1060991 0 5.02E-77 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22055_c4_g4_i1 6.695138221 12.25646451 1.133811929 0.092507258 -3.434289623 0.004515718 0.019432667 Down 1.318971 0.5478944 1.850903 0 0.1298919 0.1521138 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22055_c4_g5_i1 7.799724539 14.12168108 1.477768002 0.104645332 -3.25642014 0.003420512 0.01528673 Down 1.317703 0.9474185 1.329396 0.06804303 0.1357578 0.07699879 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22055_c4_g7_i1 8.574181165 17.14836233 0 0 #NAME? 6.80E-06 5.67E-05 Down 1.590436 1.667595 0.8100682 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22055_c5_g1_i1 3.341450836 6.682901672 0 0 #NAME? 0.012400125 0.045547732 Down 1.139989 2.228555 0.5897468 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22059_c0_g2_i2 32.86021607 46.94600729 18.77442484 0.399915263 -1.322233752 0.014847028 0.05294196 Down 6.56536 2.800019 5.173935 1.268407 1.015261 2.448339 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22059_c0_g4_i1 39.46893264 23.5600205 55.37784477 2.350500703 1.232968112 0.004328248 0.018749131 Up 1.166411 1.68767 2.90811 3.735892 3.495749 3.741735 XP_011087943.1 uncharacterized protein LOC105169275 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG0714 Molecular chaperone (DnaJ superfamily) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0484 "ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)" -- -- -- TRINITY_DN2205_c0_g1_i1 11.44841715 22.8968343 0 0 #NAME? 1.19E-06 1.13E-05 Down 2.003371 1.997532 4.411272 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22065_c0_g1_i1 12.11658095 18.0540671 6.179094799 0.342255004 -1.546856462 0.049191854 0.139831288 Down 2.33251 4.005865 3.642575 0.6905751 2.084741 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2206_c0_g1_i1 527.2160159 871.6090921 182.8229397 0.209753365 -2.253234142 1.63E-67 2.63E-65 Down 84.95848 93.03387 82.11269 10.26677 15.01571 18.85998 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22077_c0_g5_i1 9.480425048 3.64269853 15.31815157 4.205165879 2.072162711 0.031210789 0.097357843 Up 0 0.3225981 0.9045522 1.712452 0.7789255 1.661537 XP_011071327.1 pto-interacting protein 1 isoform X2 [Sesamum indicum] O80719|Y2706_ARATH Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana OX=3702 GN=At2g47060 PE=1 SV=1 sind:105156806 K13436 PTI1 pto-interacting protein 1 ko04626 Plant-pathogen interaction KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN22081_c0_g1_i2 184.7304529 250.9630795 118.4978262 0.472172347 -1.082614544 2.11E-08 2.56E-07 Down 10.2793 10.75281 10.78656 4.081954 3.439898 4.672201 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22081_c0_g2_i1 120.7518014 169.2157802 72.28782256 0.427193152 -1.227039573 4.39E-07 4.44E-06 Down 11.30688 10.50738 8.820298 4.288631 3.27783 2.948296 EYU37327.1 hypothetical protein MIMGU_mgv1a009917mg [Erythranthe guttata] Q9ZQ19|RFA2A_ARATH Replication protein A 32 kDa subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA2A PE=1 SV=2 sind:105155698 K10739 "RFA2, RPA2" replication factor A2 ko03430|ko03030|ko03440|ko03420 Mismatch repair|DNA replication|Homologous recombination|Nucleotide excision repair KOG3108 "Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG5235 Replication Protein "Biological Process: telomere maintenance via recombination (GO:0000722);|Biological Process: double-strand break repair via homologous recombination (GO:0000724);|Cellular Component: chromosome, telomeric region (GO:0000781);|Cellular Component: chromatin (GO:0000785);|Cellular Component: condensed nuclear chromosome (GO:0000794);|Molecular Function: damaged DNA binding (GO:0003684);|Molecular Function: double-stranded DNA binding (GO:0003690);|Molecular Function: single-stranded DNA binding (GO:0003697);|Cellular Component: nucleus (GO:0005634);|Cellular Component: DNA replication factor A complex (GO:0005662);|Biological Process: DNA replication (GO:0006260);|Biological Process: DNA topological change (GO:0006265);|Biological Process: DNA unwinding involved in DNA replication (GO:0006268);|Biological Process: DNA repair (GO:0006281);|Biological Process: base-excision repair (GO:0006284);|Biological Process: nucleotide-excision repair (GO:0006289);|Biological Process: mismatch repair (GO:0006298);|Biological Process: mitotic recombination (GO:0006312);|Biological Process: telomere maintenance via telomerase (GO:0007004);|Biological Process: reciprocal meiotic recombination (GO:0007131);|Biological Process: gene silencing (GO:0016458);|Biological Process: heteroduplex formation (GO:0030491);|Cellular Component: site of double-strand break (GO:0035861);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of helicase activity (GO:0051096);|Molecular Function: G-rich strand telomeric DNA binding (GO:0098505);|Biological Process: regulation of DNA damage checkpoint (GO:2000001);" PF08784.10 Replication protein A C terminal TRINITY_DN22081_c0_g3_i1 23.23968967 46.47937935 0 0 #NAME? 3.93E-15 9.20E-14 Down 5.161324 6.042006 4.839676 1.85E-64 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22089_c0_g1_i1 156.6661922 96.81761541 216.514769 2.236315862 1.161123972 5.20E-08 5.96E-07 Up 3.710695 6.693215 6.604176 11.16043 9.638973 9.895276 XP_012851203.1 PREDICTED: uncharacterized protein LOC105970926 [Erythranthe guttata] -- -- sind:105168382 K09775 K09775 uncharacterized protein -- -- -- -- -- -- -- S COG1963 Acid phosphatase vanadium-dependent haloperoxidase related -- PF02681.13 Divergent PAP2 family TRINITY_DN2208_c0_g1_i1 5.172661241 10.34532248 0 0 #NAME? 0.000838857 0.004470853 Down 1.970345 2.395163 1.589525 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22096_c0_g2_i1 48.89303174 31.92618864 65.85987483 2.062879336 1.044659436 0.025114718 0.081518226 Up 3.644341 4.818444 7.184311 8.585951 5.670764 11.70754 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22097_c0_g1_i2 105.5781371 143.9506521 67.20562205 0.466865701 -1.098920493 1.48E-05 0.000115963 Down 3.067525 3.269783 3.218932 1.360466 1.097571 1.139597 XP_011091835.1 phosphatidylinositol 4-phosphate 5-kinase 6 isoform X1 [Sesamum indicum] Q9SFB8|PI5K6_ARATH Phosphatidylinositol 4-phosphate 5-kinase 6 OS=Arabidopsis thaliana OX=3702 GN=PIP5K6 PE=2 SV=1 sind:105172174 K00889 PIP5K 1-phosphatidylinositol-4-phosphate 5-kinase ko00562|ko04144|ko04070 Inositol phosphate metabolism|Endocytosis|Phosphatidylinositol signaling system KOG0229 Phosphatidylinositol-4-phosphate 5-kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG5253 phosphatidylinositol-4-phosphate 5-kinase Molecular Function: ATP binding (GO:0005524);|Molecular Function: 1-phosphatidylinositol-4-phosphate 5-kinase activity (GO:0016308);|Cellular Component: apical plasma membrane (GO:0016324);|Biological Process: clathrin-dependent endocytosis (GO:0072583);|Cellular Component: pollen tube (GO:0090406); "PF01504.17,PF02493.19" Phosphatidylinositol-4-phosphate 5-Kinase|MORN repeat TRINITY_DN22100_c0_g1_i1 24.07182088 48.14364175 0 0 #NAME? 7.80E-13 1.52E-11 Down 4.993445 4.766949 8.553138 0 0 0 -- -- Q33DV3|4CGT_ANTMA Chalcone 4'-O-glucosyltransferase OS=Antirrhinum majus OX=4151 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Cellular Component: cytoplasm (GO:0005737);|Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);|Biological Process: pigment biosynthetic process (GO:0046148);|Molecular Function: naringenin chalcone 4'-O-glucosyltransferase activity (GO:0102890);|Molecular Function: 2'4'6'34-pentahydroxychalcone 4'-O-glucosyltransferase activity (GO:0102891);" -- -- TRINITY_DN22100_c0_g2_i1 139.960123 279.5580108 0.362235236 0.001295743 -9.592005083 9.17E-84 1.96E-81 Down 8.072983 6.784858 7.699065 5.05E-102 0.02661048 0 XP_019431828.1 PREDICTED: uncharacterized protein LOC109338930 [Lupinus angustifolius] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); "PF13966.5,PF13456.5" zinc-binding in reverse transcriptase|Reverse transcriptase-like TRINITY_DN22100_c1_g2_i3 38.00956361 58.76148602 17.2576412 0.293689666 -1.767635593 0.005167619 0.021786361 Down 8.273151 6.464125 3.276559 1.720176 0.5282158 2.028757 XP_011088043.1 F-box protein SKIP22-like [Sesamum indicum] Q9ZUB8|SKI22_ARATH F-box protein SKIP22 OS=Arabidopsis thaliana OX=3702 GN=SKIP22 PE=1 SV=1 sind:105169353 K10293 FBXO7 F-box protein 7 -- -- -- -- -- -- -- S ENOG410ZN35 F-box domain Cellular Component: nucleus (GO:0005634);|Biological Process: protein ubiquitination (GO:0016567); -- -- TRINITY_DN22102_c0_g1_i6 110.6503036 53.87491319 167.4256941 3.107674503 1.635835404 5.22E-11 8.59E-10 Up 4.16423 4.668875 3.666583 11.02598 10.24903 9.923208 PIN00159.1 Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family) [Handroanthus impetiginosus] Q9S7V4|HA22A_ARATH HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1 sind:105159954 K17279 REEP5_6 receptor expression-enhancing protein 5/6 -- -- KOG1725 Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family) [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U COG5052 receptor accessory protein Biological Process: response to cold (GO:0009409);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to abscisic acid (GO:0009737);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: hyperosmotic salinity response (GO:0042538); PF03134.18 "TB2/DP1, HVA22 family" TRINITY_DN22105_c0_g1_i2 1091.746664 589.0106683 1594.48266 2.707052258 1.436722738 1.42E-52 1.66E-50 Up 47.89506 53.57357 54.36761 115.7095 116.4395 108.2646 OMO77427.1 hypothetical protein COLO4_25183 [Corchorus olitorius] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22107_c0_g1_i2 10.05961201 17.46581182 2.653412205 0.151920348 -2.718612982 0.002652289 0.012285242 Down 2.755866 2.052197 3.845748 7.53E-66 0.26123 0.804 XP_021635268.1 protein disulfide isomerase-like 1-4 [Hevea brasiliensis] Q9FF55|PDI14_ARATH Protein disulfide isomerase-like 1-4 OS=Arabidopsis thaliana OX=3702 GN=PDIL1-4 PE=1 SV=1 pvu:PHAVU_005G135600g K09580 "PDIA1, P4HB" protein disulfide-isomerase A1 ko04141 Protein processing in endoplasmic reticulum KOG0190 Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0526 Thioredoxin Molecular Function: protein disulfide isomerase activity (GO:0003756);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: nucleus (GO:0005634);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum lumen (GO:0005788);|Biological Process: protein folding (GO:0006457);|Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: chloroplast (GO:0009507);|Biological Process: response to endoplasmic reticulum stress (GO:0034976);|Biological Process: cell redox homeostasis (GO:0045454); -- -- TRINITY_DN22108_c0_g4_i5 54.92477339 101.4893093 8.360237477 0.082375548 -3.601640031 3.83E-09 5.10E-08 Down 2.677699 2.603399 4.348095 0.03876272 0.5695468 0.028281 XP_015382874.1 uncharacterized protein LOC107175698 [Citrus sinensis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN2210_c0_g1_i1 3.530520989 7.061041978 0 0 #NAME? 0.009737907 0.037252049 Down 0.889847 1.944505 0.3428014 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22112_c0_g1_i2 530.9627852 342.0717024 719.8538679 2.104394672 1.073405303 9.39E-19 2.83E-17 Up 14.25285 14.75807 14.54562 22.7534 26.77006 24.37923 XP_011081907.1 probable protein phosphatase 2C 22 isoform X2 [Sesamum indicum] Q9SLA1|P2C22_ARATH Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana OX=3702 GN=At2g25620 PE=1 SV=1 sind:105164818 K14803 PTC2_3 protein phosphatase PTC2/3 -- -- KOG0698 Serine/threonine protein phosphatase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0631 Phosphatase Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: regulation of defense response to virus (GO:0050688); PF00481.20 Protein phosphatase 2C TRINITY_DN22115_c0_g2_i2 149.6571967 199.7063002 99.60809314 0.498772913 -1.003544976 3.32E-06 2.93E-05 Down 5.40723 5.099615 4.703339 2.029679 1.982745 2.100426 KMS98576.1 hypothetical protein BVRB_4g092630 [Beta vulgaris subsp. vulgaris] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- PF03078.14 ATHILA ORF-1 family TRINITY_DN22115_c1_g2_i2 48.99752003 10.81655719 87.17848286 8.059725596 3.010730721 1.78E-09 2.47E-08 Up 1.48628 1.575204 0.7700525 7.732156 10.68982 6.032938 XP_021751635.1 uncharacterized protein LOC110717290 [Chenopodium quinoa] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN22115_c1_g3_i1 38.37863685 8.140289072 68.61698462 8.429305644 3.075413795 0.010475469 0.03954041 Up 4.280911 1.58E-38 6.77E-29 16.95771 4.429683 6.938665 XP_024631674.1 uncharacterized protein LOC112419073 [Medicago truncatula] Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=3 SV=2 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" PF00665.25 Integrase core domain TRINITY_DN22122_c0_g1_i1 22.69486798 32.7249966 12.66473936 0.387005063 -1.369575655 0.013173758 0.047981203 Down 5.048085 7.435045 6.087718 2.808136 0.9499948 1.882291 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22126_c0_g5_i2 77.59748374 114.4336383 40.7613292 0.356200588 -1.489238198 0.000355997 0.002087558 Down 22.10612 14.08578 13.63604 6.775484 3.824699 3.783078 XP_011091101.1 "photosynthetic NDH subunit of subcomplex B 5, chloroplastic [Sesamum indicum]" Q9FG89|PNSB5_ARATH "Photosynthetic NDH subunit of subcomplex B 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB5 PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG41127XZ NA Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: chloroplast membrane (GO:0031969); -- -- TRINITY_DN22129_c0_g1_i7 54.75858554 97.96023323 11.55693786 0.11797581 -3.083437019 5.93E-15 1.37E-13 Down 4.539948 5.76484 5.585026 0.6426929 0.3211959 0.5718139 PWA61847.1 hypothetical protein CTI12_AA182550 [Artemisia annua] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22131_c0_g1_i1 643.0571795 965.7717374 320.3426216 0.331695999 -1.592066483 2.48E-43 2.19E-41 Down 52.53562 48.73968 52.27387 13.92653 13.2455 13.92568 XP_011082933.1 protodermal factor 1-like [Sesamum indicum] Q9S728|PDF1_ARATH Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z5QI NA Cellular Component: extracellular region (GO:0005576); -- -- TRINITY_DN22132_c2_g2_i1 7.303091592 2.658542347 11.94764084 4.494056997 2.168018422 0.048286632 0.137697896 Up 0 0.3482913 0.6492361 0.5768797 1.491256 1.728002 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22132_c2_g5_i2 351.9874657 527.5977148 176.3772166 0.334302465 -1.580774102 2.66E-26 1.25E-24 Down 20.49016 21.15717 18.32785 5.324034 5.031703 5.864723 XP_021628388.1 uncharacterized protein LOC110626658 [Manihot esculenta] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- PF03732.16 Retrotransposon gag protein TRINITY_DN22145_c0_g2_i9 129.4711307 257.4827726 1.45948884 0.005668297 -7.46286892 9.22E-16 2.25E-14 Down 10.92584 16.9957 8.155689 0.08403385 0.08396014 0 XP_022856119.1 two-component response regulator ARR4-like [Olea europaea var. sylvestris] O82798|ARR4_ARATH Two-component response regulator ARR4 OS=Arabidopsis thaliana OX=3702 GN=ARR4 PE=1 SV=1 sind:105168196 K14492 ARR-A two-component response regulator ARR-A family ko04075 Plant hormone signal transduction KOG1601 GATA-4/5/6 transcription factors [K] INFORMATION STORAGE AND PROCESSING Transcription T COG0784 response regulator "Molecular Function: phosphorelay response regulator activity (GO:0000156);|Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: circadian rhythm (GO:0007623);|Biological Process: response to cytokinin (GO:0009735);|Biological Process: cytokinin-activated signaling pathway (GO:0009736);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: red or far-red light signaling pathway (GO:0010017);|Biological Process: response to red light (GO:0010114);|Biological Process: protein autophosphorylation (GO:0046777);" -- -- TRINITY_DN22145_c0_g3_i1 27.92876451 53.68411761 2.173411413 0.040485185 -4.626462133 1.03E-11 1.83E-10 Down 4.348824 2.353795 3.813369 4.40E-54 0.3638074 0 PIN25627.1 "1,3-beta-glucan synthase/callose synthase catalytic subunit [Handroanthus impetiginosus]" Q9LYS6|CALS6_ARATH Putative callose synthase 6 OS=Arabidopsis thaliana OX=3702 GN=CALS6 PE=3 SV=2 sind:105165547 K11000 CALS callose synthase -- -- KOG0916 "1,3-beta-glucan synthase/callose synthase catalytic subunit" [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis S ENOG410XQ8V synthase "Cellular Component: 1,3-beta-D-glucan synthase complex (GO:0000148);|Molecular Function: 1,3-beta-D-glucan synthase activity (GO:0003843);|Biological Process: (1->3)-beta-D-glucan biosynthetic process (GO:0006075);|Biological Process: regulation of cell shape (GO:0008360);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: cell wall organization (GO:0071555);" -- -- TRINITY_DN22151_c0_g1_i6 63.92856908 127.8571382 0 0 #NAME? 2.20E-40 1.78E-38 Down 6.623543 7.529268 7.556242 5.78E-92 0 3.69E-83 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22151_c0_g3_i1 11.587735 17.5770697 5.598400311 0.318505895 -1.650608021 0.037741444 0.11321685 Down 3.038032 2.462625 3.097341 0 1.101013 1.046326 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22155_c0_g2_i1 258.8323426 54.96256805 462.7021171 8.418495233 3.073562381 8.36E-63 1.23E-60 Up 1.70581 2.51162 1.743944 12.7365 13.71863 13.96752 PIN26272.1 Nuclear protein involved in cell morphogenesis and cell surface growth [Handroanthus impetiginosus] -- -- sind:105164994 K16912 LAS1 ribosomal biogenesis protein LAS1 -- -- KOG2425 Nuclear protein involved in cell morphogenesis and cell surface growth [R] POORLY CHARACTERIZED General function prediction only S ENOG411230Q LAS1-like (S. cerevisiae) -- -- -- TRINITY_DN2215_c0_g1_i1 8.175074018 14.52842396 1.821724075 0.125390344 -2.995501843 0.006036079 0.024881561 Down 1.790347 0.479132 1.231523 0.1188602 0.1777446 0 XP_021692914.1 uncharacterized protein LOC110673970 isoform X1 [Hevea brasiliensis] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" -- -- TRINITY_DN22160_c0_g1_i1 13.77201796 21.61186812 5.932167804 0.274486582 -1.865192471 0.012000018 0.044329169 Down 3.96978 1.527626 2.723363 0.9314772 0.4643116 0.459433 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22161_c0_g1_i1 1975.322633 300.0531837 3650.592082 12.16648341 3.604840328 0 0 Up 6.842931 5.773867 6.666366 63.72543 63.3765 62.09174 EYU45295.1 hypothetical protein MIMGU_mgv1a002502mg [Erythranthe guttata] Q2EF88|YSL3_ARATH Metal-nicotianamine transporter YSL3 OS=Arabidopsis thaliana OX=3702 GN=YSL3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG1297 oligo-peptide transporter Biological Process: developmental process involved in reproduction (GO:0003006);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: ion transport (GO:0006811);|Biological Process: response to nematode (GO:0009624);|Biological Process: response to iron ion (GO:0010039);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: seed development (GO:0048316);|Molecular Function: iron-nicotianamine transmembrane transporter activity (GO:0051980);|Biological Process: iron ion homeostasis (GO:0055072); PF03169.14 OPT oligopeptide transporter protein TRINITY_DN22167_c0_g6_i1 16.01981148 26.89767033 5.141952631 0.191167211 -2.387092998 0.000778565 0.004178954 Down 2.558144 2.896541 2.326819 0 0.9600747 0.2364417 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22171_c1_g1_i1 18.6261413 29.77168747 7.480595139 0.251265406 -1.992716039 0.001265959 0.006435126 Down 1.996895 3.315109 4.20716 0.8367061 0.2805596 0.8567208 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22171_c1_g3_i1 10.68568505 18.37927578 2.992094329 0.162797183 -2.618852356 0.018490013 0.06352688 Down 2.681059 1.025969 4.559402 0 0.5682933 0.5708631 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22177_c0_g3_i1 11.9287336 23.85746719 0 0 #NAME? 3.80E-08 4.45E-07 Down 3.98469 4.318183 5.784965 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22177_c0_g5_i1 2.369056296 4.738112592 0 0 #NAME? 0.043941903 0.127862157 Down 0.3481946 1.161521 1.344897 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22188_c0_g1_i2 65.08595274 130.1719055 0 0 #NAME? 3.68E-41 3.05E-39 Down 3.963216 4.47826 4.835212 0 0 0 XP_011086288.1 BTB/POZ domain-containing protein At5g47800 isoform X2 [Sesamum indicum] Q9FIK1|Y5780_ARATH BTB/POZ domain-containing protein At5g47800 OS=Arabidopsis thaliana OX=3702 GN=At5g47800 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YFNP BTB POZ domain-containing protein Biological Process: protein ubiquitination (GO:0016567); PF03000.13 NPH3 family TRINITY_DN22195_c2_g4_i1 81.2350979 40.78907645 121.6811194 2.983179075 1.576850583 1.00E-07 1.11E-06 Up 2.505762 3.624247 4.349336 9.428143 8.23371 7.710222 XP_012841567.1 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Erythranthe guttata] O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN22200_c1_g1_i2 46.14376648 62.45235222 29.83518074 0.477727094 -1.065741394 0.004865739 0.020727335 Down 7.36274 6.141912 7.227739 1.451702 3.056726 3.443287 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22211_c0_g6_i1 14.33396129 23.08498479 5.582937782 0.241842818 -2.047858398 0.004822553 0.020572329 Down 1.371911 1.481439 1.54207 0.3384951 0.2024298 0.2910096 XP_011101595.1 uncharacterized protein LOC105179654 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YRWY NA -- -- -- TRINITY_DN22213_c0_g1_i1 26.22151188 39.94718012 12.49584365 0.312809155 -1.676645359 0.001622257 0.008008602 Down 6.88378 5.569394 3.921138 1.103257 0.3723471 2.674648 XP_011098550.1 probable inactive receptor kinase At1g27190 [Sesamum indicum] Q9LSI9|BIR2_ARATH Inactive LRR receptor-like serine/threonine-protein kinase BIR2 OS=Arabidopsis thaliana OX=3702 GN=BIR2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN22216_c0_g2_i4 39.5223628 56.43967773 22.60504787 0.400516955 -1.320064778 0.00202222 0.009727101 Down 3.967852 3.155492 2.381682 1.230382 0.9851641 0.8493246 XP_012827773.1 PREDICTED: uncharacterized protein LOC105949053 [Erythranthe guttata] Q9FJH5|HIP3_ARATH Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana OX=3702 GN=HIPP03 PE=1 SV=1 -- -- -- -- -- -- KOG1603 Copper chaperone [P] METABOLISM Inorganic ion transport and metabolism S COG2608 heavy metal transport detoxification protein Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: negative regulation of flower development (GO:0009910);|Biological Process: metal ion transport (GO:0030001); PF00403.25 Heavy-metal-associated domain TRINITY_DN22220_c0_g1_i1 20.06452286 36.01087073 4.118174993 0.114359217 -3.128355443 0.002950733 0.013470126 Down 8.408586 1.855352 7.384293 0.3734662 0.3742024 0.7889322 XP_011100763.1 uncharacterized protein LOC105178888 isoform X2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- C COG1142 4Fe-4S Ferredoxin iron-sulfur binding domain protein -- -- -- TRINITY_DN22229_c0_g1_i4 91.8302087 56.38898831 127.2714291 2.25702629 1.174423223 1.78E-05 0.000137351 Up 2.874543 1.948647 3.095371 4.902906 5.026166 4.539612 XP_011083300.1 aspartic proteinase CDR1-like [Sesamum indicum] Q8S9J6|ASPA_ARATH Aspartyl protease family protein At5g10770 OS=Arabidopsis thaliana OX=3702 GN=At5g10770 PE=2 SV=1 -- -- -- -- -- -- KOG1339 Aspartyl protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XNV7 aspartic Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: proteolysis (GO:0006508);|Biological Process: protein catabolic process (GO:0030163);|Cellular Component: anchored component of membrane (GO:0031225); "PF14543.5,PF14541.5,PF00026.22" Xylanase inhibitor N-terminal|Xylanase inhibitor C-terminal|Eukaryotic aspartyl protease TRINITY_DN22231_c2_g1_i2 28.89087441 38.58868463 19.19306418 0.497375445 -1.007592811 0.039464422 0.117319765 Down 1.725501 1.446959 1.604775 0.8360994 0.6887398 0.3806848 XP_019080631.1 PREDICTED: uncharacterized protein LOC109123929 isoform X1 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF14223.5,PF14244.5" gag-polypeptide of LTR copia-type|gag-polypeptide of LTR copia-type TRINITY_DN22231_c3_g6_i3 69.41299755 44.32575358 94.50024151 2.131948898 1.092172858 0.000231714 0.001417162 Up 3.20118 2.083079 1.357387 4.068483 3.314026 4.019442 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22232_c1_g2_i1 29.18681242 58.37362483 0 0 #NAME? 9.83E-19 2.96E-17 Down 5.982652 4.902462 3.851335 2.91E-105 0 5.74E-97 -- -- Q53JY8|ACLA1_ORYSJ ATP-citrate synthase subunit alpha chain protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ACLA-1 PE=3 SV=2 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: ATP citrate synthase activity (GO:0003878);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytosol (GO:0005829);|Biological Process: acetyl-CoA biosynthetic process (GO:0006085);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Cellular Component: citrate lyase complex (GO:0009346); -- -- TRINITY_DN22235_c0_g1_i1 73.0903276 99.29788533 46.88276988 0.472142682 -1.082705186 0.000456461 0.002604011 Down 3.646273 4.356296 3.482253 1.868909 1.579934 0.9156435 XP_011076432.1 WD repeat-containing protein WRAP73 [Sesamum indicum] Q96WW0|YNH9_SCHPO Uncharacterized WD repeat-containing protein C32H8.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pi015 PE=4 SV=1 -- -- -- -- -- -- KOG4497 "Uncharacterized conserved protein WDR8, contains WD repeats" [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y2P7 "WD repeat containing, antisense to TP73" Biological Process: mitotic sister chromatid segregation (GO:0000070);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Cellular Component: mitotic spindle pole body (GO:0044732);|Cellular Component: mitotic spindle (GO:0072686);|Biological Process: protein localization to mitotic spindle pole body (GO:1902440);|Biological Process: microtubule anchoring at mitotic spindle pole body (GO:1990810);|Cellular Component: MWP complex (GO:1990811); "PF12894.6,PF08662.10" Anaphase-promoting complex subunit 4 WD40 domain|Eukaryotic translation initiation factor eIF2A TRINITY_DN22237_c0_g1_i1 470.4119164 713.8400389 226.9837939 0.317975711 -1.653011527 1.33E-36 9.38E-35 Down 32.77209 34.26266 36.50495 9.639754 7.559899 9.389079 XP_020550990.1 GDSL esterase/lipase EXL3-like [Sesamum indicum] Q9FHW9|GDL90_ARATH GDSL esterase/lipase At5g42170 OS=Arabidopsis thaliana OX=3702 GN=At5g42170/At5g42160 PE=3 SV=2 -- -- -- -- -- -- -- -- -- -- -- S COG3240 GDSL esterase lipase "Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);" -- -- TRINITY_DN22237_c0_g2_i1 12.61768634 23.73932552 1.496047164 0.063019784 -3.988051382 2.10E-05 0.000159914 Down 5.457599 2.088219 4.257873 0 0.293811 0.2963326 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22244_c1_g2_i1 24.66485388 15.46001658 33.86969119 2.190792683 1.131452967 0.029830475 0.093806357 Up 0.5467807 1.750541 0.8921262 1.235605 2.205201 2.250178 XP_025608958.1 receptor-like protein 7 [Arachis hypogaea] Q9C637|RLP6_ARATH Receptor-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=RLP6 PE=3 SV=1 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021); "PF12799.6,PF13855.5,PF08263.11" Leucine Rich repeats (2 copies)|Leucine rich repeat|Leucine rich repeat N-terminal domain TRINITY_DN22251_c0_g1_i6 45.62440785 70.48131376 20.76750194 0.294652594 -1.762913127 4.38E-05 0.000313564 Down 3.033083 5.092378 3.095507 0.9341791 0.9317641 0.8071877 XP_021686353.1 uncharacterized protein LOC110669156 [Hevea brasiliensis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN22252_c3_g1_i3 115.6882987 202.3621975 29.01439983 0.143378557 -2.802098819 2.20E-25 9.82E-24 Down 6.092113 4.939274 5.024349 0.647651 0.5484395 0.6608134 XP_019150668.1 PREDICTED: uncharacterized protein LOC109147518 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03004.13 Plant transposase (Ptta/En/Spm family) TRINITY_DN22252_c3_g2_i2 32.11732766 60.17659177 4.058063557 0.067435915 -3.890339033 4.22E-12 7.72E-11 Down 4.951771 4.471422 4.19623 0.3599545 0.2370621 0.1217144 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22253_c0_g1_i1 3156.463439 974.3383523 5338.588526 5.479193663 2.453963597 5.95E-247 5.10E-244 Up 49.31203 51.04417 49.09335 223.8732 220.1566 216.762 PIN13393.1 "Glucan endo-1,3-beta-D-glucosidase [Handroanthus impetiginosus]" Q01412|E13A_SOLLC "Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum OX=4081 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- G ENOG410YAHP glucan endo-1-3-beta-glucosidase "Cellular Component: extracellular space (GO:0005615);|Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: defense response (GO:0006952);|Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);|Cellular Component: anchored component of plasma membrane (GO:0046658);" PF00332.17 Glycosyl hydrolases family 17 TRINITY_DN22256_c0_g1_i1 19.48495386 38.96990772 0 0 #NAME? 8.87E-13 1.72E-11 Down 7.348223 9.522357 6.838711 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22256_c1_g1_i1 83.64498976 34.81612704 132.4738525 3.804956602 1.927879999 7.18E-11 1.16E-09 Up 3.326165 3.749616 5.057983 12.75444 12.64644 11.59514 XP_010103480.1 probable glutathione S-transferase [Morus notabilis] Q8L7C9|GSTUK_ARATH Glutathione S-transferase U20 OS=Arabidopsis thaliana OX=3702 GN=GSTU20 PE=1 SV=1 sind:105165500 K00799 "GST, gst" glutathione S-transferase ko00480 Glutathione metabolism KOG0406 Glutathione S-transferase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XSIX glutathione Stransferase Molecular Function: glutathione transferase activity (GO:0004364);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: glutathione metabolic process (GO:0006749);|Biological Process: toxin catabolic process (GO:0009407);|Cellular Component: chloroplast (GO:0009507);|Biological Process: response to cytokinin (GO:0009735);|Molecular Function: enzyme binding (GO:0019899);|Biological Process: regulation of growth (GO:0040008);|Cellular Component: apoplast (GO:0048046);|Biological Process: regulation of response to red or far red light (GO:2000030); "PF13410.5,PF00043.24" "Glutathione S-transferase, C-terminal domain|Glutathione S-transferase, C-terminal domain" TRINITY_DN22256_c2_g3_i1 841.3708915 1525.243622 157.4981608 0.103260986 -3.275632812 4.59E-153 2.13E-150 Down 87.28947 98.66798 97.93824 6.510213 9.848808 7.287477 XP_011082829.1 probable glutathione S-transferase [Sesamum indicum] Q03666|GSTX4_TOBAC Probable glutathione S-transferase OS=Nicotiana tabacum OX=4097 PE=2 SV=1 sind:105165500 K00799 "GST, gst" glutathione S-transferase ko00480 Glutathione metabolism KOG0406 Glutathione S-transferase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XSIX glutathione Stransferase Molecular Function: glutathione transferase activity (GO:0004364);|Biological Process: auxin-activated signaling pathway (GO:0009734); "PF02798.19,PF13417.5,PF13409.5,PF13410.5,PF00043.24" "Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, C-terminal domain|Glutathione S-transferase, C-terminal domain" TRINITY_DN22258_c0_g2_i2 34.30204067 64.43106886 4.17301248 0.064767084 -3.948595388 2.67E-13 5.40E-12 Down 6.98785 8.080437 8.506254 0 0.2809403 0.8793127 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22261_c0_g1_i1 6.399756272 12.79951254 0 0 #NAME? 0.00011448 0.000748895 Down 1.195845 2.352665 3.320331 0 0 0 XP_017620035.1 PREDICTED: protein WVD2-like 6 isoform X1 [Gossypium arboreum] Q94C48|WDL5_ARATH Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGX4 Targeting protein for Xklp2 (TPX2) Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874);|Molecular Function: microtubule binding (GO:0008017);|Biological Process: cellular response to ethylene stimulus (GO:0071369); -- -- TRINITY_DN22261_c1_g1_i1 47.66551273 94.24431976 1.086705707 0.011530729 -6.438372469 4.03E-20 1.33E-18 Down 23.86017 21.81658 13.92935 1.51E-80 0.5543298 8.57E-72 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22263_c0_g3_i1 21.93679383 11.89028729 31.98330036 2.689867754 1.427535245 0.014648791 0.052370841 Up 0.6689449 0.6494274 1.448209 2.55217 1.530939 2.008667 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22264_c0_g2_i1 4.402079339 8.804158678 0 0 #NAME? 0.002301749 0.010856535 Down 0.6477404 2.152176 1.863352 5.20E-55 2.93E-66 1.42E-56 XP_011078388.1 calmodulin-like protein 3 [Sesamum indicum] Q9SU00|CML2_ARATH Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1 sind:105162129 K13448 CML calcium-binding protein CML ko04626 Plant-pathogen interaction KOG0027 Calmodulin and related proteins (EF-Hand superfamily) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms DTZ COG5126 Calcium-binding protein Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: double fertilization forming a zygote and endosperm (GO:0009567); -- -- TRINITY_DN22271_c2_g1_i1 5.33906538 9.953660288 0.724470471 0.072784328 -3.780228357 0.010093061 0.038336067 Down 1.150677 1.364093 1.027698 0 0.2264747 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22290_c0_g1_i2 95.96903542 62.7466813 129.1913895 2.058935817 1.041898858 6.19E-05 0.000429156 Up 2.920781 3.184107 2.727494 5.29249 5.36593 3.938474 XP_012840190.1 PREDICTED: AT-hook motif nuclear-localized protein 9 [Erythranthe guttata] O49658|AHL2_ARATH AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDXW "AT hook motif domain containing protein, expressed" Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634); PF03479.14 Domain of unknown function (DUF296) TRINITY_DN22301_c0_g1_i1 262.0684445 72.69414119 451.4427477 6.210166876 2.634632036 6.14E-50 6.72E-48 Up 4.92262 5.791219 5.019065 25.79326 26.23911 26.63941 XP_011075962.1 uncharacterized protein LOC105160330 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG4178 Soluble epoxide hydrolase [I] METABOLISM Lipid transport and metabolism S COG0596 Alpha beta hydrolase -- -- -- TRINITY_DN22301_c0_g3_i1 59.88932476 19.62959617 100.1490533 5.101941604 2.351046386 2.57E-11 4.38E-10 Up 1.143255 1.217502 1.227049 4.407113 5.556764 4.598125 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22305_c0_g1_i2 18.56277366 8.27195263 28.8535947 3.488123783 1.802451238 0.002758297 0.012722636 Up 1.170478 0.7856501 0.349313 1.998519 1.218105 2.943664 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22305_c1_g1_i1 742.966158 281.6947702 1204.237546 4.274973032 2.095915319 2.59E-78 5.06E-76 Up 9.867639 14.86525 14.67466 42.57189 44.91353 48.54831 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22305_c1_g2_i1 386.0620998 126.0143238 646.1098758 5.127273285 2.358191796 3.07E-57 4.09E-55 Up 13.61388 14.0392 16.25069 59.92811 55.41851 66.19226 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22308_c0_g1_i1 366.5714661 210.2020456 522.9408865 2.48780113 1.314871164 1.18E-19 3.78E-18 Up 10.46434 9.970247 12.8946 21.17545 22.6098 23.12731 PIN24661.1 Iron/ascorbate family oxidoreductase [Handroanthus impetiginosus] Q9FLV0|DMR6_ARATH Protein DOWNY MILDEW RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=DMR6 PE=1 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: defense response to oomycetes (GO:0002229);|Biological Process: response to oomycetes (GO:0002239);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to fungus (GO:0009620);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: flavonoid biosynthetic process (GO:0009813);|Biological Process: leaf senescence (GO:0010150);|Molecular Function: flavone synthase activity (GO:0033759);|Molecular Function: salicylate 5-hydroxylase activity (GO:0034785);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: salicylic acid catabolic process (GO:0046244);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213); "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN22313_c0_g1_i4 53.95387052 77.49678044 30.4109606 0.392415794 -1.349544988 0.000151485 0.000967685 Down 6.320944 5.519332 6.280947 1.8591 2.077297 1.777858 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22318_c0_g1_i11 44.90787013 89.81574027 0 0 #NAME? 8.72E-29 4.67E-27 Down 2.797033 3.703086 3.974271 3.61E-53 4.46E-57 1.02E-75 EYU25254.1 hypothetical protein MIMGU_mgv1a009364mg [Erythranthe guttata] Q9SM23|ACBP1_ARATH Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=ACBP1 PE=1 SV=2 -- -- -- -- -- -- KOG0817 Acyl-CoA-binding protein [I] METABOLISM Lipid transport and metabolism I COG4281 Acyl-CoA binding domain containing Molecular Function: fatty-acyl-CoA binding (GO:0000062);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: lipid metabolic process (GO:0006629);|Biological Process: lipid transport (GO:0006869);|Molecular Function: lipid binding (GO:0008289);|Biological Process: response to cold (GO:0009409);|Cellular Component: plant-type cell wall (GO:0009505);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: regulation of seed germination (GO:0010029);|Biological Process: seed dormancy process (GO:0010162);|Biological Process: response to lead ion (GO:0010288);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: lead ion binding (GO:0032791);|Biological Process: seed development (GO:0048316);|Molecular Function: phosphatidic acid binding (GO:0070300);|Biological Process: regulation of seedling development (GO:1900140); -- -- TRINITY_DN22318_c0_g6_i1 7.803257565 15.60651513 0 0 #NAME? 0.014050241 0.050589562 Down 5.678842 2.340099 0.3167883 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22319_c3_g2_i2 144.8696087 60.60261923 229.1365982 3.780968564 1.918755854 8.00E-18 2.28E-16 Up 5.750099 5.204146 5.11375 16.13596 16.74052 16.18113 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2232_c0_g1_i1 9.473873684 16.04986548 2.897881884 0.180554902 -2.469490508 0.016428903 0.057547434 Down 5.146303 1.663265 3.356711 0 1.547679 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22332_c0_g4_i1 23.65667365 34.10237378 13.21097352 0.387391611 -1.368135382 0.012525277 0.045933099 Down 2.174975 2.354029 2.372587 0.6055722 1.209799 0.288728 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22340_c0_g1_i1 112.3534162 218.4570782 6.249754133 0.028608614 -5.127406606 6.61E-51 7.40E-49 Down 6.502594 6.559883 6.774828 0.1102954 0.2545542 0.07757159 XP_010260173.1 PREDICTED: uncharacterized protein LOC104599359 [Nelumbo nucifera] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF14223.5,PF03732.16,PF13976.5,PF14244.5" gag-polypeptide of LTR copia-type|Retrotransposon gag protein|GAG-pre-integrase domain|gag-polypeptide of LTR copia-type TRINITY_DN22348_c2_g2_i1 85.25095578 52.31010373 118.1918078 2.259445105 1.175968506 0.002940002 0.013424829 Up 2.480661 2.730134 4.568953 4.104861 6.332394 7.483749 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22348_c2_g5_i4 50.20082341 68.09548618 32.30616064 0.474424407 -1.075749863 0.003287579 0.014771164 Down 3.398795 2.332909 3.02052 1.300383 1.013583 1.068115 XP_012831420.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Erythranthe guttata] F4I9E1|NFD4_ARATH Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana OX=3702 GN=NFD4 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBHK Nodulin-like Biological Process: karyogamy (GO:0000741);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: response to salt stress (GO:0009651);|Biological Process: polar nucleus fusion (GO:0010197);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN22349_c0_g1_i7 101.9055843 141.023388 62.78778057 0.445229557 -1.167378724 9.64E-06 7.82E-05 Down 11.44315 12.13836 8.661468 4.084881 3.640865 3.84336 -- -- O82626|ERG_ANTMA GTP-binding protein ERG OS=Antirrhinum majus OX=4151 GN=ERG PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: RNA binding (GO:0003723);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: intracellular (GO:0005622); -- -- TRINITY_DN22349_c0_g2_i1 100.7563514 147.0152191 54.4974838 0.370692804 -1.431703986 5.67E-08 6.48E-07 Down 18.18636 19.43748 16.37208 4.549514 4.83044 6.827002 PSR95800.1 Geranylgeranyl diphosphate reductase [Actinidia chinensis var. chinensis] Q9ZS34|CHLP_TOBAC "Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CHLP PE=2 SV=1" vra:106768993 K10960 "chlP, bchP" geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase ko00900|ko00860 Terpenoid backbone biosynthesis|Porphyrin and chlorophyll metabolism -- -- -- -- -- C COG0644 geranylgeranyl reductase Cellular Component: chloroplast (GO:0009507);|Biological Process: vitamin E biosynthetic process (GO:0010189);|Biological Process: photosynthesis (GO:0015979);|Biological Process: chlorophyll biosynthetic process (GO:0015995);|Biological Process: geranylgeranyl diphosphate metabolic process (GO:0033385);|Biological Process: phytyl diphosphate biosynthetic process (GO:0033521);|Molecular Function: geranylgeranyl reductase activity (GO:0045550);|Molecular Function: FAD binding (GO:0071949);|Molecular Function: geranylgeranyl diphosphate reductase activity (GO:0102067); -- -- TRINITY_DN22349_c0_g4_i1 2.77114018 5.542280359 0 0 #NAME? 0.024086304 0.078788613 Down 0.4106096 1.217071 1.659029 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22350_c0_g3_i1 13.72125367 22.92272215 4.519785186 0.197174889 -2.342452267 0.00876704 0.034148125 Down 2.124018 7.276747 5.086391 1.114878 0.000141215 1.106904 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22352_c0_g4_i1 26.88948216 39.00003428 14.77893003 0.378946591 -1.399933567 0.036555814 0.110499972 Down 4.135348 7.171838 3.779064 0.3599719 0.9591157 3.307593 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22365_c0_g1_i2 172.0712673 111.4245256 232.718009 2.088570785 1.06251604 1.61E-07 1.73E-06 Up 4.511285 3.981381 5.263527 6.983687 8.051749 8.222044 XP_012832060.1 PREDICTED: mitochondrial substrate carrier family protein B-like [Erythranthe guttata] O04619|ADNT1_ARATH Mitochondrial adenine nucleotide transporter ADNT1 OS=Arabidopsis thaliana OX=3702 GN=ADNT1 PE=1 SV=1 -- -- -- -- -- -- KOG0752 Mitochondrial solute carrier protein [C] METABOLISM Energy production and conversion S ENOG410ZRF1 Solute carrier family 25 Cellular Component: mitochondrial inner membrane (GO:0005743);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); PF00153.26 Mitochondrial carrier protein TRINITY_DN22372_c0_g1_i3 1197.74414 781.758899 1613.729381 2.064228989 1.04560302 2.05E-31 1.21E-29 Up 30.26956 30.63519 29.16791 48.02154 50.92983 51.14387 XP_011096699.1 berberine bridge enzyme-like 21 [Sesamum indicum] Q9SVG3|BBE21_ARATH Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana OX=3702 GN=At4g20840 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein "Cellular Component: cell wall (GO:0005618);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor (GO:0016899);|Cellular Component: apoplast (GO:0048046);|Molecular Function: FAD binding (GO:0071949);" "PF01565.22,PF08031.11" FAD binding domain|Berberine and berberine like TRINITY_DN22373_c0_g1_i1 259.1039152 159.6667439 358.5410864 2.245558953 1.167074598 3.27E-12 6.04E-11 Up 16.64977 15.57628 18.4946 32.87662 27.10552 31.84692 XP_020554509.1 uncharacterized protein LOC105176868 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41129PA NA -- -- -- TRINITY_DN2237_c0_g1_i1 47.13426322 94.26852644 0 0 #NAME? 6.17E-30 3.44E-28 Down 7.520261 8.754131 7.174877 2.31E-47 2.33E-80 5.39E-52 XP_011102234.1 uncharacterized protein LOC105180257 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111K8A NA -- -- -- TRINITY_DN22380_c0_g2_i2 22.13316079 32.38898075 11.87734082 0.366709311 -1.447291197 0.010109438 0.038391847 Down 6.117968 5.175162 6.011257 2.145138 1.448058 1.475607 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22384_c2_g3_i2 28.69941586 54.42219993 2.9766318 0.054695176 -4.192442596 6.43E-12 1.16E-10 Down 3.066843 3.485964 3.324269 0.3077098 0 0.1092686 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22386_c0_g2_i1 9.698698659 2.496717408 16.90067991 6.769160121 2.758976843 0.016945888 0.05896087 Up 0 1.372149 0 3.127862 0.6233389 3.530995 XP_022861596.1 zinc finger CCCH domain-containing protein 5 isoform X3 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22390_c0_g1_i8 210.2072377 281.1560305 139.2584449 0.495306626 -1.013606174 1.04E-07 1.15E-06 Down 8.656861 8.825285 11.46668 3.806146 3.959161 3.803073 XP_012833553.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Erythranthe guttata] C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF13855.5,PF12799.6,PF00560.32,PF00069.24,PF07714.16" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Protein kinase domain|Protein tyrosine kinase TRINITY_DN22395_c1_g1_i1 4.489192202 8.978384404 0 0 #NAME? 0.002131715 0.010170794 Down 2.452675 1.061405 1.938775 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22395_c4_g1_i11 119.4091946 177.0299852 61.78840403 0.3490279 -1.518585729 8.48E-10 1.21E-08 Down 7.466128 8.222895 5.891608 2.064083 2.37059 1.612988 EYU25632.1 hypothetical protein MIMGU_mgv1a006215mg [Erythranthe guttata] Q6K638|HCT2_ORYSJ Hydroxycinnamoyltransferase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=HCT2 PE=2 SV=1 sind:105155477 K13065 "E2.3.1.133, HCT" shikimate O-hydroxycinnamoyltransferase ko00940|ko00945|ko00941 "Phenylpropanoid biosynthesis|Stilbenoid, diarylheptanoid and gingerol biosynthesis|Flavonoid biosynthesis" -- -- -- -- -- S ENOG410XNR7 BAHD family acyltransferase "Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);" -- -- TRINITY_DN22401_c0_g3_i3 14.55839447 22.16575814 6.95103081 0.31359319 -1.673033863 0.023259675 0.076553052 Down 2.744743 2.229129 1.424432 1.082563 0.5372035 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22408_c0_g1_i8 77.90579112 109.7494212 46.06216102 0.419702997 -1.252559329 2.39E-05 0.000180058 Down 4.227615 4.104027 4.100278 1.134938 1.612359 1.481268 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22411_c0_g1_i1 23.09130931 41.26931382 4.913304798 0.119054676 -3.070303806 0.000427667 0.002458288 Down 6.351855 8.6852 2.795365 0.4244951 0.2108006 1.085002 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22411_c1_g1_i5 380.1933941 539.5844598 220.8023284 0.409208094 -1.289093413 1.45E-19 4.62E-18 Down 24.72571 26.4823 24.13627 8.693563 9.046893 7.088767 ALP82445.1 delta 1-pyrroline-5-carboxylate synthase [Lycoris radiata] O04015|P5CS_ACTDE Delta-1-pyrroline-5-carboxylate synthase OS=Actinidia deliciosa OX=3627 PE=2 SV=1 csv:101210588 K12657 "ALDH18A1, P5CS" delta-1-pyrroline-5-carboxylate synthetase ko00330 Arginine and proline metabolism KOG4165 Gamma-glutamyl phosphate reductase [E] METABOLISM Amino acid transport and metabolism E COG0263 Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline (By similarity) Molecular Function: glutamate 5-kinase activity (GO:0004349);|Molecular Function: glutamate-5-semialdehyde dehydrogenase activity (GO:0004350);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: L-proline biosynthetic process (GO:0055129); -- -- TRINITY_DN22411_c1_g5_i1 5.40427748 0 10.80855496 Inf Inf 0.000258623 0.001566959 Up 0 1.17E-68 6.30E-75 0.4650075 1.62369 1.720819 XP_026425967.1 pleiotropic drug resistance protein 2-like isoform X4 [Papaver somniferum] Q9XIE2|AB36G_ARATH ABC transporter G family member 36 OS=Arabidopsis thaliana OX=3702 GN=ABCG36 PE=1 SV=1 -- -- -- -- -- -- KOG0065 "Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG0842 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: drug transmembrane transport (GO:0006855);|Cellular Component: chloroplast (GO:0009507);|Biological Process: systemic acquired resistance (GO:0009627);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: defense response to fungus, incompatible interaction (GO:0009817);|Cellular Component: chloroplast envelope (GO:0009941);|Molecular Function: cadmium ion transmembrane transporter activity (GO:0015086);|Biological Process: cadmium ion transport (GO:0015691);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: negative regulation of defense response (GO:0031348);|Biological Process: indole glucosinolate catabolic process (GO:0042344);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: defense response by callose deposition in cell wall (GO:0052544);|Biological Process: transmembrane transport (GO:0055085);|Biological Process: cellular response to indolebutyric acid stimulus (GO:0071366);" -- -- TRINITY_DN22415_c0_g1_i1 199.5052464 91.69291991 307.3175729 3.351595447 1.74484802 1.04E-19 3.34E-18 Up 3.008378 4.456923 4.122417 11.19208 10.27742 9.814411 XP_011074881.1 uncharacterized protein LOC105159499 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111EAT Protein of unknown function (DUF1644) -- PF07800.11 Protein of unknown function (DUF1644) TRINITY_DN22423_c0_g3_i1 164.0047405 250.4911266 77.51835437 0.309465471 -1.692149649 1.40E-15 3.36E-14 Down 7.000909 7.675287 6.879964 1.786217 1.914046 1.644241 KZV47481.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Dorcoceras hygrometricum] P08770|TRA1_MAIZE Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: transposition (GO:0032196);|Molecular Function: protein dimerization activity (GO:0046983); "PF14372.5,PF05699.13" Domain of unknown function (DUF4413)|hAT family C-terminal dimerisation region TRINITY_DN22424_c0_g1_i1 577.9872633 378.1983154 777.7762113 2.056530079 1.040212173 1.48E-18 4.42E-17 Up 11.92139 12.02815 13.3828 19.57928 21.13577 21.29925 XP_011093557.1 protein NRT1/ PTR FAMILY 6.2 [Sesamum indicum] Q9SZY4|PTR27_ARATH Protein NRT1/ PTR FAMILY 6.2 OS=Arabidopsis thaliana OX=3702 GN=NPF6.2 PE=1 SV=1 -- -- -- -- -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Biological Process: response to wounding (GO:0009611);|Biological Process: response to jasmonic acid (GO:0009753);|Molecular Function: peptide:proton symporter activity (GO:0015333);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oligopeptide transmembrane transporter activity (GO:0035673);|Biological Process: nitrate assimilation (GO:0042128);|Molecular Function: peptide transmembrane transporter activity (GO:1904680); PF00854.20 POT family TRINITY_DN22427_c0_g1_i4 143.7090949 222.1174677 65.3007221 0.293991836 -1.766152003 7.50E-13 1.46E-11 Down 7.113602 9.541168 8.622072 1.845976 2.759437 1.36749 XP_011098918.1 ACT domain-containing protein ACR6 [Sesamum indicum] Q9SGA0|ACR6_ARATH ACT domain-containing protein ACR6 OS=Arabidopsis thaliana OX=3702 GN=ACR6 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YF4V ACT domain Molecular Function: amino acid binding (GO:0016597); "PF01842.24,PF13291.5,PF13740.5" ACT domain|ACT domain|ACT domain TRINITY_DN22432_c0_g1_i1 14.21181137 4.88373574 23.53988701 4.820057485 2.269050352 0.002130006 0.010165033 Up 0.1723574 0.383159 0.2999867 1.276718 1.691479 0.6175797 PIN07990.1 UDP-glucuronosyl and UDP-glucosyl transferase [Handroanthus impetiginosus] V5LLZ9|GGT_QUERO Gallate 1-beta-glucosyltransferase OS=Quercus robur OX=38942 GN=UGT84A13 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: gallate 1-beta-glucosyltransferase activity (GO:0047913); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN22432_c0_g2_i1 11.54550964 3.441866734 19.64915254 5.708865004 2.513203948 0.002457628 0.011493828 Up 0.2937328 0.8825468 0.6803943 2.05972 3.459643 2.675809 XP_011088204.1 limonoid UDP-glucosyltransferase [Sesamum indicum] V5LLZ9|GGT_QUERO Gallate 1-beta-glucosyltransferase OS=Quercus robur OX=38942 GN=UGT84A13 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: gallate 1-beta-glucosyltransferase activity (GO:0047913); -- -- TRINITY_DN22432_c0_g6_i2 65.20692277 43.23214402 87.18170152 2.016594446 1.011920975 0.001707684 0.00838111 Up 1.417565 1.787354 1.732856 2.637516 2.314583 3.034684 PIN07991.1 UDP-glucuronosyl and UDP-glucosyl transferase [Handroanthus impetiginosus] V5LLZ9|GGT_QUERO Gallate 1-beta-glucosyltransferase OS=Quercus robur OX=38942 GN=UGT84A13 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: gallate 1-beta-glucosyltransferase activity (GO:0047913); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN22435_c0_g1_i2 90.29097249 12.95289489 167.6290501 12.94143522 3.693925717 2.82E-30 1.60E-28 Up 0.724098 0.3251894 0.6549155 7.162212 5.692844 5.316501 XP_011092698.2 aminotransferase ALD1 isoform X1 [Sesamum indicum] Q9ZQI7|ALD1_ARATH "Aminotransferase ALD1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALD1 PE=1 SV=2" sind:105169200 K10206 E2.6.1.83 LL-diaminopimelate aminotransferase ko00300 Lysine biosynthesis KOG0257 "Kynurenine aminotransferase, glutamine transaminase K" [E] METABOLISM Amino acid transport and metabolism E COG0436 aminotransferase "Molecular Function: transaminase activity (GO:0008483);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid (GO:0009536);|Biological Process: systemic acquired resistance (GO:0009627);|Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);|Biological Process: leaf senescence (GO:0010150);|Molecular Function: pyridoxal phosphate binding (GO:0030170);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: L-pipecolic acid biosynthetic process (GO:0062034);|Molecular Function: L-lysine alpha-aminotransferase (GO:0062045);" PF00155.20 Aminotransferase class I and II TRINITY_DN22440_c2_g5_i3 105.072416 200.1623319 9.982500096 0.049872021 -4.325625511 9.06E-41 7.42E-39 Down 9.460049 8.854005 10.35962 0.6777651 0.254082 0.219975 PIN01564.1 Cytochrome P450 CYP2 subfamily [Handroanthus impetiginosus] Q6WNQ8|C81E8_MEDTR Cytochrome P450 81E8 OS=Medicago truncatula OX=3880 GN=CYP81E8 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN22457_c0_g1_i1 14.38832841 24.96060563 3.816051194 0.152882957 -2.709500508 0.002689393 0.012438064 Down 1.463312 3.727839 1.905201 0.1250149 0.1243634 0.7093214 XP_011089967.1 zinc finger protein STOP1 homolog [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG5048 Zinc finger protein -- -- -- TRINITY_DN22478_c0_g2_i3 1882.001217 1122.58587 2641.416564 2.352975069 1.234486034 1.97E-55 2.48E-53 Up 68.91224 82.78439 72.08533 145.6009 141.6779 137.4001 XP_012857431.1 PREDICTED: putative methyltransferase DDB_G0268948 [Erythranthe guttata] P38892|CRG1_YEAST Probable S-adenosylmethionine-dependent methyltransferase CRG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CRG1 PE=1 SV=1 -- -- -- -- -- -- KOG3010 Methyltransferase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111IQH Methyltransferase Molecular Function: mRNA binding (GO:0003729);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: methyltransferase activity (GO:0008168);|Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757);|Biological Process: lipid homeostasis (GO:0055088); "PF08241.11,PF13649.5,PF08242.11,PF13847.5" Methyltransferase domain|Methyltransferase domain|Methyltransferase domain|Methyltransferase domain TRINITY_DN22483_c0_g1_i1 385.1104586 218.425358 551.7955592 2.526243125 1.336993491 1.83E-21 6.60E-20 Up 6.663649 7.899269 7.444277 15.00632 14.21037 15.63113 XP_011088157.1 cytokinin dehydrogenase 6 isoform X2 [Sesamum indicum] O22213|CKX1_ARATH Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana OX=3702 GN=CKX1 PE=1 SV=1 sind:105169465 K00279 CKX cytokinin dehydrogenase ko00908 Zeatin biosynthesis KOG1231 Proteins containing the FAD binding domain [C] METABOLISM Energy production and conversion C COG0277 FAD linked oxidase domain protein Cellular Component: vacuole (GO:0005773);|Biological Process: cytokinin catabolic process (GO:0009823);|Molecular Function: cytokinin dehydrogenase activity (GO:0019139);|Biological Process: meristem development (GO:0048507);|Molecular Function: FAD binding (GO:0071949); "PF09265.9,PF01565.22" "Cytokinin dehydrogenase 1, FAD and cytokinin binding|FAD binding domain" TRINITY_DN22492_c0_g1_i2 68.09933096 136.1986619 0 0 #NAME? 9.23E-43 8.07E-41 Down 9.10248 9.785808 8.49828 7.82E-52 0 4.53E-61 XP_011076399.1 hexose carrier protein HEX6 isoform X1 [Sesamum indicum] Q07423|HEX6_RICCO Hexose carrier protein HEX6 OS=Ricinus communis OX=3988 GN=HEX6 PE=2 SV=1 -- -- -- -- -- -- KOG0254 Predicted transporter (major facilitator superfamily) [R] POORLY CHARACTERIZED General function prediction only G ENOG410XNQK Transporter Biological Process: carbohydrate transport (GO:0008643);|Molecular Function: symporter activity (GO:0015293);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN22492_c0_g3_i1 6.137874545 12.27574909 0 0 #NAME? 0.000250464 0.001522405 Down 0.8395377 1.62835 3.074471 0 0 0 XP_015877756.1 hexose carrier protein HEX6-like [Ziziphus jujuba] Q07423|HEX6_RICCO Hexose carrier protein HEX6 OS=Ricinus communis OX=3988 GN=HEX6 PE=2 SV=1 -- -- -- -- -- -- KOG0254 Predicted transporter (major facilitator superfamily) [R] POORLY CHARACTERIZED General function prediction only G ENOG410XNQK Transporter Biological Process: carbohydrate transport (GO:0008643);|Molecular Function: symporter activity (GO:0015293);|Cellular Component: integral component of membrane (GO:0016021); PF00083.23 Sugar (and other) transporter TRINITY_DN22497_c0_g6_i1 31.04095196 51.21484686 10.86705707 0.212185679 -2.236600806 0.000890194 0.004709073 Down 4.106296 2.622604 3.014219 7.56E-35 1.657811 7.20E-25 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22503_c0_g2_i1 6.660801082 11.11936369 2.202238473 0.198054361 -2.336031624 0.038286467 0.114526365 Down 2.090375 0.6210144 2.005793 0.1868632 0.5391531 0.187155 PIN00977.1 hypothetical protein CDL12_26518 [Handroanthus impetiginosus] Q8H965|NPC6_ARATH Non-specific phospholipase C6 OS=Arabidopsis thaliana OX=3702 GN=NPC6 PE=2 SV=1 sind:105166126 K01114 plcC phospholipase C ko00562|ko00565|ko00564 Inositol phosphate metabolism|Ether lipid metabolism|Glycerophospholipid metabolism -- -- -- -- -- M COG3511 phospholipase C Molecular Function: acid phosphatase activity (GO:0003993);|Cellular Component: extracellular region (GO:0005576);|Biological Process: phospholipid catabolic process (GO:0009395); -- -- TRINITY_DN22505_c3_g2_i1 45.27103517 89.80705198 0.735018369 0.008184417 -6.93290462 6.77E-26 3.09E-24 Down 14.0435 10.06307 9.681748 0.2057691 2.18E-90 9.70E-63 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22509_c1_g1_i5 74.29369577 101.1899885 47.39740306 0.468400123 -1.09418664 0.000424477 0.002441874 Down 8.714833 13.75508 13.64709 3.410449 4.450704 5.887915 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22509_c1_g2_i4 62.65640832 95.59097549 29.72184115 0.310927271 -1.685350935 3.38E-07 3.48E-06 Down 5.000661 5.675759 6.226295 1.151662 0.7650669 2.336836 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22509_c1_g4_i1 3.875537623 0 7.751075246 Inf Inf 0.002889121 0.013235027 Up 0 0 0 0.8764117 1.785451 0.9409725 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2250_c0_g1_i1 11.28962757 17.11935687 5.459898277 0.318931273 -1.648682527 0.043342711 0.126540757 Down 3.198805 2.335982 3.758033 0.8055226 1.641453 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22518_c0_g1_i11 118.9907554 58.27052903 179.7109818 3.084080148 1.624840258 6.20E-08 7.05E-07 Up 3.060155 2.631108 1.517069 4.694991 5.85018 7.322931 XP_016459499.1 PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X2 [Nicotiana tabacum] Q6Z4U4|BAK1_ORYSJ LRR receptor kinase BAK1 OS=Oryza sativa subsp. japonica OX=39947 GN=BAK1 PE=1 SV=1 sita:101770461 K13418 SERK1 somatic embryogenesis receptor kinase 1 -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410ZNK7 Somatic embryogenesis receptor kinase Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);|Molecular Function: signaling receptor binding (GO:0005102);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: detection of brassinosteroid stimulus (GO:0009729);|Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: protein homodimerization activity (GO:0042803); "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN22518_c0_g3_i1 11.31729696 5.607209889 17.02738403 3.036694607 1.602501828 0.033741791 0.103776756 Up 0.958514 0.6931091 0.1819832 1.903774 1.484683 1.202126 XP_012838912.1 PREDICTED: somatic embryogenesis receptor kinase 2 [Erythranthe guttata] Q9XIC7|SERK2_ARATH Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=SERK2 PE=1 SV=1 sind:105158921 K13418 SERK1 somatic embryogenesis receptor kinase 1 -- -- -- -- -- -- -- T ENOG410ZNK7 Somatic embryogenesis receptor kinase -- -- -- TRINITY_DN22524_c1_g1_i1 47.84157396 27.04597339 68.63717453 2.537796423 1.343576344 0.000403678 0.00233667 Up 0.7306419 0.7562351 0.8317531 1.37904 1.410607 1.944047 XP_011077655.1 wall-associated receptor kinase 5 [Sesamum indicum] Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16,PF13947.5,PF07645.14,PF12947.6,PF00008.26" Protein kinase domain|Protein tyrosine kinase|Wall-associated receptor kinase galacturonan-binding|Calcium-binding EGF domain|EGF domain|EGF-like domain TRINITY_DN22535_c0_g2_i1 12.09300538 19.17076224 5.015248507 0.261609238 -1.934514607 0.013530131 0.049055369 Down 2.557525 1.818135 1.714842 6.39E-14 8.29E-22 1.276409 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22537_c0_g1_i2 60.84530102 87.13791334 34.5526887 0.39652876 -1.334502588 6.11E-05 0.000424445 Down 3.424054 3.774913 4.097645 1.127391 1.260856 1.251609 XP_011099842.1 "chaperonin CPN60, mitochondrial [Sesamum indicum]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZCUP NA -- -- -- TRINITY_DN22539_c1_g1_i1 10.85536404 20.24069134 1.470036737 0.072627793 -3.783334453 0.000128243 0.000831618 Down 4.511619 2.429263 2.35631 0.5213793 5.60E-42 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22543_c0_g1_i1 32.34707514 64.69415028 0 0 #NAME? 8.13E-21 2.81E-19 Down 7.9103 8.543592 7.505509 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22544_c0_g1_i1 37.46841972 20.08730899 54.84953045 2.730556416 1.449194965 0.000678074 0.003699496 Up 0.9771741 1.08209 0.9706516 2.171507 1.800427 2.731091 PIN12634.1 hypothetical protein CDL12_14752 [Handroanthus impetiginosus] Q9SD53|Y3720_ARATH UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111A8U Conserved gene of Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); PF03140.14 Plant protein of unknown function TRINITY_DN22548_c0_g1_i6 133.5140189 212.7738163 54.25422142 0.254985422 -1.971513325 7.29E-17 1.94E-15 Down 6.868466 6.960972 6.975893 1.305141 1.494884 1.475688 XP_011083190.1 AAA-ATPase At3g50940-like [Sesamum indicum] Q8VZG2|HSR4_ARATH Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=HSR4 PE=2 SV=1 sind:105165763 K08900 BCS1 mitochondrial chaperone BCS1 -- -- KOG0743 AAA+-type ATPase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0465 "Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)" Biological Process: response to molecule of bacterial origin (GO:0002237);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial envelope (GO:0005740);|Cellular Component: mitochondrial outer membrane (GO:0005741);|Biological Process: cell death (GO:0008219);|Biological Process: response to UV (GO:0009411);|Biological Process: response to bacterium (GO:0009617);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: salicylic acid mediated signaling pathway (GO:0009863);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887);|Molecular Function: identical protein binding (GO:0042802); -- -- TRINITY_DN22548_c0_g3_i1 3.633257681 7.266515363 0 0 #NAME? 0.041468197 0.122096768 Down 0.411917 2.327911 0.3958129 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22548_c0_g5_i1 18.14563314 25.89451009 10.39675619 0.401504263 -1.31651279 0.037856622 0.113511591 Down 2.156567 2.091393 4.786378 0.8186057 1.152837 0.9870406 XP_011093526.1 zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Sesamum indicum] Q9LHJ8|SAP5_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana OX=3702 GN=SAP5 PE=2 SV=1 -- -- -- -- -- -- KOG3173 Predicted Zn-finger protein [R] POORLY CHARACTERIZED General function prediction only S ENOG4111UWC zinc finger Molecular Function: DNA binding (GO:0003677);|Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to osmotic stress (GO:0006970);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: protein autoubiquitination (GO:0051865); -- -- TRINITY_DN22548_c0_g6_i1 17.08295357 30.77220263 3.393704522 0.110284745 -3.180694848 1.30E-05 0.000103534 Down 3.387874 2.015777 1.699983 0.1856865 0.06250213 0.3326561 XP_011083190.1 AAA-ATPase At3g50940-like [Sesamum indicum] Q8GW96|AATP3_ARATH AAA-ATPase At2g18193 OS=Arabidopsis thaliana OX=3702 GN=At2g18193 PE=2 SV=1 sind:105165763 K08900 BCS1 mitochondrial chaperone BCS1 -- -- KOG0743 AAA+-type ATPase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0465 "Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)" Molecular Function: ATP binding (GO:0005524);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887); -- -- TRINITY_DN22548_c0_g7_i1 11.59058099 23.18116198 0 0 #NAME? 7.73E-08 8.66E-07 Down 2.927537 5.552512 3.125989 0 0 0 XP_017633273.1 PREDICTED: U-box domain-containing protein 12-like [Gossypium arboreum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2254_c0_g1_i2 8.647121391 0.624179352 16.67006343 26.70716898 4.73915515 4.74E-05 0.000337567 Up 0 0.1787925 0 1.08125 1.718855 1.195622 ACL84443.1 "Jafrac1-PA, partial [synthetic construct]" O74887|TPX1_SCHPO Peroxiredoxin tpx1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tpx1 PE=1 SV=1 -- -- -- -- -- -- KOG0852 "Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0450 alkyl hydroperoxide reductase Molecular Function: peroxidase activity (GO:0004601);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: response to oxidative stress (GO:0006979);|Molecular Function: thioredoxin peroxidase activity (GO:0008379);|Biological Process: positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress (GO:0036091);|Biological Process: hydrogen peroxide catabolic process (GO:0042744);|Biological Process: negative regulation of DNA-binding transcription factor activity (GO:0043433);|Biological Process: cell redox homeostasis (GO:0045454);|Molecular Function: unfolded protein binding (GO:0051082);|Molecular Function: peroxiredoxin activity (GO:0051920);|Biological Process: cellular detoxification of hydrogen peroxide (GO:0061692); "PF00578.20,PF08534.9" AhpC/TSA family|Redoxin TRINITY_DN22552_c0_g1_i7 238.6531844 475.0464762 2.259892593 0.004757203 -7.71567065 1.54E-123 5.03E-121 Down 7.479041 6.08565 6.858645 0.03444978 0 0.03742099 CAN66863.1 hypothetical protein VITISV_013500 [Vitis vinifera] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF14223.5,PF00665.25" gag-polypeptide of LTR copia-type|Integrase core domain TRINITY_DN22554_c2_g1_i1 21.69132369 35.23523589 8.14741149 0.231229089 -2.112605193 0.000359395 0.002104681 Down 2.14481 3.686898 2.552026 0.4715495 0.6187357 0.4609485 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22554_c3_g1_i1 3.971410289 7.942820578 0 0 #NAME? 0.003979814 0.017407562 Down 1.025231 0.7419835 2.153272 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22554_c4_g2_i2 70.23700066 101.1508931 39.32310821 0.388756906 -1.363059792 0.001810394 0.008813029 Down 9.461376 7.135264 5.139938 1.332119 2.097121 3.373786 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22554_c4_g7_i1 13.91929048 27.83858095 0 0 #NAME? 2.90E-09 3.92E-08 Down 4.614842 6.881711 3.746338 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22554_c4_g8_i1 10.64276917 21.28553834 0 0 #NAME? 0.000376021 0.002190826 Down 7.051886 5.72106 0.931522 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22554_c4_g9_i2 20.21117744 39.26498985 1.15736504 0.02947575 -5.084327648 1.18E-09 1.67E-08 Down 5.006985 2.642683 5.498101 0 0 0.3174492 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22556_c0_g1_i1 68.03776927 37.9536633 98.12187523 2.585307101 1.370335664 1.84E-05 0.000142145 Up 1.531426 1.173425 1.810971 2.635371 3.46453 3.355367 XP_020550038.1 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 [Sesamum indicum] Q9M2U3|ALPL_ARATH Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1 -- -- -- -- -- -- KOG4585 Predicted transposase [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG411206Y transposon protein Molecular Function: nuclease activity (GO:0004518);|Cellular Component: nucleus (GO:0005634);|Molecular Function: metal ion binding (GO:0046872); PF13359.5 DDE superfamily endonuclease TRINITY_DN22558_c0_g1_i3 293.9947949 195.367049 392.6225408 2.009666128 1.006955842 2.33E-08 2.81E-07 Up 4.783627 4.186358 5.16953 8.83429 7.08348 6.957666 XP_011071759.1 HIPL1 protein [Sesamum indicum] Q9SSG3|HIPL1_ARATH HIPL1 protein OS=Arabidopsis thaliana OX=3702 GN=HIPL1 PE=3 SV=2 -- -- -- -- -- -- -- -- -- -- -- G COG2133 Dehydrogenase Cellular Component: plasma membrane (GO:0005886);|Molecular Function: oxidoreductase activity (GO:0016491);|Cellular Component: anchored component of membrane (GO:0031225);|Cellular Component: anchored component of plasma membrane (GO:0046658); PF07995.10 Glucose / Sorbosone dehydrogenase TRINITY_DN22566_c0_g4_i2 63.64304309 33.58169311 93.70439307 2.790341534 1.480441717 6.28E-06 5.27E-05 Up 0.9684464 1.605256 1.261354 2.493831 2.992514 3.08994 EYU43608.1 hypothetical protein MIMGU_mgv1a001835mg [Erythranthe guttata] Q94AI6|SEC6_ARATH Exocyst complex component SEC6 OS=Arabidopsis thaliana OX=3702 GN=SEC6 PE=1 SV=1 -- -- -- -- -- -- KOG2286 Exocyst complex subunit SEC6 [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U COG5173 Exocyst complex component Cellular Component: exocyst (GO:0000145);|Molecular Function: SNARE binding (GO:0000149);|Cellular Component: cell wall (GO:0005618);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytoskeleton (GO:0005856);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: exocytosis (GO:0006887);|Cellular Component: phragmoplast (GO:0009524);|Biological Process: exocyst localization (GO:0051601);|Cellular Component: extracellular exosome (GO:0070062); PF06046.12 Exocyst complex component Sec6 TRINITY_DN22569_c0_g1_i1 396.1432536 535.567019 256.7194882 0.479341481 -1.060874301 1.30E-14 2.91E-13 Down 24.35166 25.23888 24.74846 9.795633 8.691357 10.25126 XP_011076792.1 protein phosphatase 2C 37 [Sesamum indicum] P49598|P2C37_ARATH Protein phosphatase 2C 37 OS=Arabidopsis thaliana OX=3702 GN=PP2CA PE=1 SV=1 sind:105160949 K14497 PP2C protein phosphatase 2C ko04075 Plant hormone signal transduction KOG0698 Serine/threonine protein phosphatase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0631 Phosphatase Molecular Function: phosphoprotein phosphatase activity (GO:0004721);|Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: response to cold (GO:0009409);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);|Biological Process: regulation of stomatal movement (GO:0010119);|Biological Process: negative regulation of anion channel activity (GO:0010360);|Molecular Function: phosphatase activity (GO:0016791);|Molecular Function: kinase binding (GO:0019900);|Molecular Function: protein kinase binding (GO:0019901);|Molecular Function: metal ion binding (GO:0046872); PF00481.20 Protein phosphatase 2C TRINITY_DN22581_c0_g1_i4 179.1970209 67.71310716 290.6809346 4.292831133 2.101929423 7.22E-25 3.13E-23 Up 3.115426 2.575295 2.611875 9.47647 8.738512 10.46822 XP_011078028.1 protein ALP1-like [Sesamum indicum] Q94K49|ALP1_ARATH Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=ALP1 PE=1 SV=1 -- -- -- -- -- -- KOG4585 Predicted transposase [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG411206Y transposon protein Molecular Function: chromatin binding (GO:0003682);|Molecular Function: nuclease activity (GO:0004518);|Cellular Component: nucleus (GO:0005634);|Biological Process: negative regulation of chromatin silencing (GO:0031936);|Cellular Component: ESC/E(Z) complex (GO:0035098);|Cellular Component: PRC1 complex (GO:0035102);|Molecular Function: metal ion binding (GO:0046872); PF13359.5 DDE superfamily endonuclease TRINITY_DN22582_c0_g1_i6 3240.154968 1145.835061 5334.474874 4.65553469 2.218946871 1.15E-208 8.88E-206 Up 55.58432 59.2813 57.75564 211.9093 214.2147 222.5917 EYU20151.1 hypothetical protein MIMGU_mgv1a010591mg [Erythranthe guttata] Q9LU64|SODF2_ARATH "Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FSD2 PE=1 SV=1" sind:105160768 K04564 SOD2 "superoxide dismutase, Fe-Mn family" ko04146 Peroxisome KOG0876 Manganese superoxide dismutase [P] METABOLISM Inorganic ion transport and metabolism P COG0605 Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity) Molecular Function: superoxide dismutase activity (GO:0004784);|Cellular Component: nucleoid (GO:0009295);|Biological Process: response to UV (GO:0009411);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: thylakoid (GO:0009579);|Cellular Component: chloroplast nucleoid (GO:0042644);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: oxidation-reduction process (GO:0055114); "PF02777.17,PF00081.21" "Iron/manganese superoxide dismutases, C-terminal domain|Iron/manganese superoxide dismutases, alpha-hairpin domain" TRINITY_DN22589_c0_g1_i2 76.38068844 42.41221216 110.3491647 2.601825255 1.37952407 2.28E-06 2.06E-05 Up 2.252516 2.053752 1.488421 4.373456 3.770914 4.004922 XP_020552388.1 U-box domain-containing protein 9 [Sesamum indicum] Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana OX=3702 GN=PUB9 PE=1 SV=1 -- -- -- -- -- -- KOG0167 FOG: Armadillo/beta-catenin-like repeats [S] POORLY CHARACTERIZED Function unknown S ENOG410YG40 Ubox domain-containing protein Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transmembrane receptor protein serine/threonine kinase binding (GO:0070696);|Biological Process: cellular response to abscisic acid stimulus (GO:0071215); "PF04564.14,PF00514.22" U-box domain|Armadillo/beta-catenin-like repeat TRINITY_DN22593_c1_g2_i1 135.7334989 230.9955059 40.47149198 0.175204673 -2.512886844 3.88E-25 1.70E-23 Down 11.98476 11.11154 12.75755 1.430143 1.954624 1.712212 XP_011076917.1 uncharacterized protein LOC105161049 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111QDI Alpha beta hydrolase fold protein -- "PF12697.6,PF12146.7,PF00561.19" "Alpha/beta hydrolase family|Serine aminopeptidase, S33|alpha/beta hydrolase fold" TRINITY_DN22596_c2_g3_i3 27.60503175 39.62424846 15.58581504 0.393340332 -1.346149972 0.007952548 0.031442383 Down 4.366315 3.295782 3.225195 0.6521512 1.573156 1.177787 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22597_c0_g1_i1 6.237659512 11.01583018 1.45948884 0.132490136 -2.916043141 0.018177504 0.062590566 Down 0.7903625 2.293176 1.379503 0.2575627 0.2596951 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22602_c1_g3_i1 20.44420032 11.99422368 28.89417696 2.40900768 1.268438993 0.02629965 0.084668085 Up 0.9711068 0.8366447 0.7994858 2.054667 1.645668 1.381859 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22619_c2_g2_i1 12.9401524 25.88030481 0 0 #NAME? 8.65E-07 8.40E-06 Down 3.457183 1.119147 2.895978 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22629_c3_g3_i2 134.2674295 268.5348591 0 0 #NAME? 2.11E-82 4.48E-80 Down 12.77094 10.14344 11.74995 1.26E-33 3.13E-31 1.94E-24 PRQ25648.1 "putative C2 domain, phosphoribosyltransferase [Rosa chinensis]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDAD Plant phosphoribosyltransferase C-terminal -- -- -- TRINITY_DN22641_c0_g3_i1 58.60703767 116.0802634 1.133811929 0.009767482 -6.677797535 3.39E-14 7.31E-13 Down 14.40774 12.08116 22.93083 8.06E-14 0.1281305 0.2074348 XP_009782292.1 PREDICTED: 60S ribosomal protein L3-2 [Nicotiana sylvestris] P22738|RL32_ARATH 60S ribosomal protein L3-2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=2 SV=4 vvi:100267716 K02925 "RP-L3e, RPL3" large subunit ribosomal protein L3e ko03010 Ribosome KOG0746 60S ribosomal protein L3 and related proteins [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0087 "One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity)" Biological Process: ribosomal large subunit assembly (GO:0000027);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF06136.12 Domain of unknown function (DUF966) TRINITY_DN22641_c0_g4_i1 68.28734954 135.417334 1.15736504 0.008546654 -6.870424641 1.94E-38 1.47E-36 Down 12.54347 11.03247 10.38789 0 0 0.2653696 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22641_c0_g5_i1 4.465248625 8.930497249 0 0 #NAME? 0.002369575 0.011138628 Down 1.587104 1.113559 0.8876448 0 0 0 KZV56348.1 hypothetical protein F511_00345 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZGFF altered inheritance of mitochondria protein -- -- -- TRINITY_DN22643_c0_g1_i2 275.7252907 136.9305787 414.5200028 3.027227423 1.597997063 1.56E-22 5.92E-21 Up 3.733112 4.167832 3.745542 9.860619 8.832633 9.749639 KZV37825.1 ferric reduction oxidase 2-like [Dorcoceras hygrometricum] P92949|FRO2_ARATH Ferric reduction oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=FRO2 PE=1 SV=2 -- -- -- -- -- -- KOG0039 "Ferric reductase, NADH/NADPH oxidase and related proteins" [PQ] METABOLISM|METABOLISM "Inorganic ion transport and metabolism |Secondary metabolites biosynthesis, transport and catabolism " U ENOG410XNZY NADPH Oxidase Molecular Function: ferric-chelate reductase activity (GO:0000293);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: ion transport (GO:0006811);|Biological Process: response to bacterium (GO:0009617);|Biological Process: iron chelate transport (GO:0015688);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: iron ion homeostasis (GO:0055072); "PF08030.11,PF08022.11,PF01794.18,PF00175.20" Ferric reductase NAD binding domain|FAD-binding domain|Ferric reductase like transmembrane component|Oxidoreductase NAD-binding domain TRINITY_DN2264_c0_g1_i1 7.128456142 12.44573611 1.811176178 0.145525838 -2.780652769 0.014264623 0.051199023 Down 2.017373 2.560102 2.250723 0 0.7687804 0 XP_025885564.1 uncharacterized protein LOC112941045 [Solanum lycopersicum] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZXEB Integrase core domain -- PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN22650_c1_g1_i1 502.8018693 262.5061589 743.0975798 2.830781506 1.501200399 8.34E-33 5.16E-31 Up 36.22877 45.25403 37.49901 86.95968 86.05934 99.03474 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22650_c3_g2_i3 185.6707724 282.5653876 88.77615713 0.314179164 -1.670340591 0.023705571 0.077750505 Down 24.17668 12.43311 8.855822 2.503606 4.08504 4.942351 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22650_c3_g5_i1 39.86618905 79.73237811 0 0 #NAME? 1.60E-25 7.19E-24 Down 14.32028 16.24329 15.21197 5.00E-68 4.18E-66 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22650_c3_g8_i1 6.723826443 13.44765289 0 0 #NAME? 0.001540546 0.007654334 Down 2.697775 0.5339887 4.260907 0 2.35E-106 3.82E-106 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22653_c0_g1_i1 12472.02316 6787.964911 18156.08142 2.674745915 1.41940185 5.74E-132 2.12E-129 Up 477.115 468.5448 474.0244 996.3508 1050.641 1017.264 XP_011097952.1 probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Sesamum indicum] Q6NQE2|FQRL1_ARATH Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27270 PE=1 SV=1 sind:105176750 K03809 wrbA NAD(P)H dehydrogenase (quinone) ko00130 Ubiquinone and other terpenoid-quinone biosynthesis KOG3135 "1,4-benzoquinone reductase-like; Trp repressor binding protein-like/protoplast-secreted protein" [R] POORLY CHARACTERIZED General function prediction only S COG0655 Nadph-dependent fmn reductase Molecular Function: NAD(P)H dehydrogenase (quinone) activity (GO:0003955);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: FMN binding (GO:0010181);|Biological Process: oxidation-reduction process (GO:0055114); "PF03358.14,PF02525.16" NADPH-dependent FMN reductase|Flavodoxin-like fold TRINITY_DN22653_c0_g2_i6 269.0181973 72.3324832 465.7039114 6.438378593 2.686697413 4.08E-51 4.58E-49 Up 4.378682 5.407777 8.277174 30.09048 30.48351 33.7922 XP_010240992.1 PREDICTED: probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 isoform X1 [Nelumbo nucifera] Q9AYU0|QR2_TRIVS Quinone-oxidoreductase QR2 OS=Triphysaria versicolor OX=64093 PE=1 SV=1 nnu:104585721 K03809 wrbA NAD(P)H dehydrogenase (quinone) ko00130 Ubiquinone and other terpenoid-quinone biosynthesis KOG3135 "1,4-benzoquinone reductase-like; Trp repressor binding protein-like/protoplast-secreted protein" [R] POORLY CHARACTERIZED General function prediction only S COG0655 Nadph-dependent fmn reductase Molecular Function: NAD(P)H dehydrogenase (quinone) activity (GO:0003955);|Molecular Function: FMN binding (GO:0010181); "PF03358.14,PF02525.16" NADPH-dependent FMN reductase|Flavodoxin-like fold TRINITY_DN22653_c0_g3_i2 1014.158391 441.1169792 1587.199802 3.598138084 1.847250553 4.62E-39 3.60E-37 Up 34.14505 31.25376 25.35992 94.67192 88.793 79.95728 EXC29543.1 Flavoprotein wrbA [Morus notabilis] Q9AYU0|QR2_TRIVS Quinone-oxidoreductase QR2 OS=Triphysaria versicolor OX=64093 PE=1 SV=1 gra:105778079 K03809 wrbA NAD(P)H dehydrogenase (quinone) ko00130 Ubiquinone and other terpenoid-quinone biosynthesis KOG3135 "1,4-benzoquinone reductase-like; Trp repressor binding protein-like/protoplast-secreted protein" [R] POORLY CHARACTERIZED General function prediction only S COG0655 Nadph-dependent fmn reductase Molecular Function: NAD(P)H dehydrogenase (quinone) activity (GO:0003955);|Molecular Function: FMN binding (GO:0010181); "PF03358.14,PF02525.16" NADPH-dependent FMN reductase|Flavodoxin-like fold TRINITY_DN22654_c0_g1_i1 131.6987704 183.816298 79.58124283 0.432938992 -1.207764353 1.31E-07 1.42E-06 Down 6.405246 6.088231 6.315365 2.496714 1.834078 2.241032 PIN06774.1 Multicopper oxidase [Handroanthus impetiginosus] Q9FY79|LAC14_ARATH Laccase-14 OS=Arabidopsis thaliana OX=3702 GN=LAC14 PE=2 SV=1 sind:105158919 K05909 E1.10.3.2 laccase -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase "Molecular Function: copper ion binding (GO:0005507);|Molecular Function: oxidoreductase activity, oxidizing metal ions (GO:0016722);|Biological Process: lignin catabolic process (GO:0046274);|Cellular Component: apoplast (GO:0048046);|Molecular Function: hydroquinone:oxygen oxidoreductase activity (GO:0052716);" "PF07731.13,PF00394.21,PF07732.14" Multicopper oxidase|Multicopper oxidase|Multicopper oxidase TRINITY_DN22660_c0_g1_i2 62.84947353 86.11518801 39.58375906 0.459660601 -1.121359082 0.000570002 0.003173177 Down 7.399164 6.268112 6.991158 2.353134 2.05957 3.272098 PIN15913.1 hypothetical protein CDL12_11448 [Handroanthus impetiginosus] O04336|WRK21_ARATH Probable WRKY transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=WRKY21 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YIPU Transcription factor Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: nucleus (GO:0005634);|Biological Process: glucosinolate metabolic process (GO:0019760);|Molecular Function: sequence-specific DNA binding (GO:0043565); -- -- TRINITY_DN22661_c0_g2_i1 21.38307558 29.2514445 13.51470665 0.462018436 -1.113977672 0.044023249 0.128008926 Down 2.290962 3.044499 3.142645 1.166745 0.3843105 1.520849 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22668_c4_g4_i1 12.06150318 5.542280359 18.580726 3.352541697 1.745255276 0.029509131 0.092976192 Up 0.205578 0.8062675 0.9344424 1.358898 2.030789 1.896876 PIN08658.1 hypothetical protein CDL12_18767 [Handroanthus impetiginosus] Q9FLS0|FB253_ARATH F-box protein At5g07610 OS=Arabidopsis thaliana OX=3702 GN=At5g07610 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YS8Z F-box protein -- -- -- TRINITY_DN22668_c4_g5_i1 175.8531309 66.80232311 284.9039386 4.264880701 2.092505387 2.70E-24 1.13E-22 Up 4.884101 4.308388 4.213466 14.67054 15.05277 16.53946 XP_011072035.1 "pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Sesamum indicum]" Q9LIQ7|PP252_ARATH "Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1" -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- "PF13041.5,PF01535.19" PPR repeat family|PPR repeat TRINITY_DN22668_c4_g6_i1 6.956184531 2.100413626 11.81195544 5.623633027 2.491502454 0.028240194 0.089781982 Up 0 0.2544951 0.8400408 2.361311 1.634985 0.9322372 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22672_c3_g1_i1 273.6944296 179.1078743 368.2809848 2.056196504 1.039978144 1.17E-10 1.86E-09 Up 8.055384 8.967418 8.51495 13.48281 14.32129 14.52778 AWW87393.1 HSF2 protein [Tectona grandis] Q9SCW4|HFB2A_ARATH Heat stress transcription factor B-2a OS=Arabidopsis thaliana OX=3702 GN=HSFB2A PE=2 SV=1 sind:105166659 K09419 HSFF "heat shock transcription factor, other eukaryote" -- -- KOG0627 Heat shock transcription factor [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5169 Transcription factor Molecular Function: RNA polymerase II proximal promoter sequence-specific DNA binding (GO:0000978);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to chitin (GO:0010200);|Biological Process: cellular response to heat (GO:0034605);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription from RNA polymerase II promoter in response to heat stress (GO:0061408); PF00447.16 HSF-type DNA-binding TRINITY_DN22672_c3_g2_i1 8.827842229 13.95985614 3.695828322 0.264746877 -1.917314426 0.046175815 0.132981777 Down 2.731666 2.854215 1.787245 0.7970491 0.5185451 0.2857348 AWW87393.1 HSF2 protein [Tectona grandis] Q652B0|HFB2C_ORYSJ Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2C PE=2 SV=1 sind:105166659 K09419 HSFF "heat shock transcription factor, other eukaryote" -- -- KOG0627 Heat shock transcription factor [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5169 Transcription factor Molecular Function: RNA polymerase II proximal promoter sequence-specific DNA binding (GO:0000978);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: cellular response to heat (GO:0034605);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription from RNA polymerase II promoter in response to heat stress (GO:0061408); -- -- TRINITY_DN22673_c0_g1_i6 469.609005 627.7469537 311.4710562 0.496172947 -1.011085017 4.52E-15 1.05E-13 Down 33.91196 28.24381 30.3561 13.41742 12.58165 10.96989 PIN16439.1 G1/S-specific cyclin D [Handroanthus impetiginosus] Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-2 PE=1 SV=1 sind:105159150 K14505 CYCD3 "cyclin D3, plant" ko04075 Plant hormone signal transduction KOG0656 G1/S-specific cyclin D [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D ENOG410XRKC "(DC) complex that phosphorylates and inhibits members of the retinoblastoma (RB) protein family including RB1 and regulates the cell-cycle during G(1) S transition. Phosphorylation of RB1 allows dissociation of the transcription factor E2F from the RB E2F complex and the subsequent transcription of E2F target genes which are responsible for the progression through the G(1) phase. Hypophosphorylates RB1 in early G(1) phase. Cyclin D-CDK4 complexes are major integrators of various mitogenenic and antimitogenic signals. Also substrate for SMAD3, phosphorylating SMAD3 in a cell-cycle-dependent manner and repressing its transcriptional activity. Component of the ternary complex, cyclin" Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);|Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: cyclin-dependent protein kinase holoenzyme complex (GO:0000307);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: regulation of mitotic nuclear division (GO:0007088);|Biological Process: positive regulation of cell proliferation (GO:0008284);|Biological Process: guard mother cell differentiation (GO:0010444);|Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);|Molecular Function: protein kinase binding (GO:0019901);|Biological Process: positive regulation of cell cycle (GO:0045787);|Biological Process: seed development (GO:0048316);|Biological Process: cell division (GO:0051301); "PF00134.22,PF02984.18" "Cyclin, N-terminal domain|Cyclin, C-terminal domain" TRINITY_DN22675_c0_g6_i1 9.414833555 18.82966711 0 0 #NAME? 2.57E-06 2.31E-05 Down 3.624201 1.376643 4.376383 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22675_c1_g2_i2 76.6488231 41.134848 112.1627982 2.726709923 1.447161229 1.21E-06 1.14E-05 Up 3.705835 2.671597 3.324677 7.305258 7.03398 6.995124 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22677_c0_g3_i3 55.1855126 27.55201107 82.81901414 3.005915391 1.587804402 4.97E-06 4.24E-05 Up 1.579123 0.7966214 1.073257 3.196516 3.144541 2.063534 XP_011071831.1 UDP-glycosyltransferase 90A1-like [Sesamum indicum] Q9ZVX4|U90A1_ARATH UDP-glycosyltransferase 90A1 OS=Arabidopsis thaliana OX=3702 GN=UGT90A1 PE=2 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN22683_c0_g1_i3 64.558858 106.0460319 23.07168413 0.217562918 -2.200495415 9.69E-11 1.55E-09 Down 4.252299 3.763958 4.503271 0.6389008 0.7536017 0.8042572 KYP50444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only Q COG2124 Cytochrome p450 Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN22686_c0_g1_i5 106.8509532 52.83850878 160.8633976 3.04443485 1.60617444 9.80E-10 1.39E-08 Up 1.504957 1.917059 2.557537 4.319669 5.849976 4.511924 EYU28022.1 hypothetical protein MIMGU_mgv1a019894mg [Erythranthe guttata] Q94KB7|MLO6_ARATH MLO-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=MLO6 PE=2 SV=2 vvi:100267554 K08472 MLO mlo protein -- -- -- -- -- -- -- U ENOG410YEMW May be involved in modulation of pathogen defense and leaf cell death (By similarity) "Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response to fungus, incompatible interaction (GO:0009817);|Cellular Component: integral component of membrane (GO:0016021);" PF03094.14 Mlo family TRINITY_DN22688_c2_g2_i2 119.1222847 164.4176602 73.8269093 0.449020557 -1.1551466 1.79E-06 1.64E-05 Down 12.11651 12.3318 12.24858 5.416354 4.996465 2.844872 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22688_c2_g4_i2 53.92963819 105.6152056 2.244070747 0.02124761 -5.556555588 1.15E-14 2.59E-13 Down 8.593876 9.372022 14.78291 8.88E-39 0.3046981 0.296084 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22690_c0_g1_i1 13.58169335 21.58326555 5.580121149 0.258539244 -1.951544811 0.009168159 0.035448912 Down 4.129866 3.402894 3.498126 0.2054612 1.221293 1.045019 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22690_c0_g2_i1 25.57280035 12.73346191 38.41213879 3.016629653 1.59293759 0.002953562 0.013477185 Up 0.9278954 1.655558 2.584922 4.97961 4.788016 2.8806 XP_022883278.1 Werner Syndrome-like exonuclease [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG4373 Predicted 3'-5' exonuclease [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS63 Exonuclease 3'-5' domain containing 2 -- -- -- TRINITY_DN22692_c0_g1_i2 1322.286171 1783.329641 861.2426998 0.482940832 -1.05008165 3.18E-33 2.00E-31 Down 75.90583 74.19203 77.0351 30.30564 30.44457 27.73307 XP_011087118.1 uncharacterized protein LOC105168684 [Sesamum indicum] O65373|BAG5_ARATH "BAG family molecular chaperone regulator 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BAG5 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410YW7W IQ calmodulin-binding and BAG domain containing Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: protein folding (GO:0006457);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: chaperone binding (GO:0051087); PF02179.15 BAG domain TRINITY_DN22692_c0_g2_i1 153.2885676 210.1484833 96.42865187 0.458859614 -1.123875261 1.48E-07 1.60E-06 Down 10.91969 12.50505 10.85872 5.658974 3.444794 3.544962 XP_011087119.1 uncharacterized protein LOC105168685 [Sesamum indicum] O65373|BAG5_ARATH "BAG family molecular chaperone regulator 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BAG5 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410YW7W IQ calmodulin-binding and BAG domain containing Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: protein folding (GO:0006457);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: chaperone binding (GO:0051087); PF02179.15 BAG domain TRINITY_DN22694_c2_g2_i2 162.5622085 255.6413419 69.48307517 0.271799055 -1.879387654 1.57E-18 4.67E-17 Down 2.711804 2.80829 2.827403 0.5188024 0.6773507 0.6399482 XP_011004665.1 "PREDICTED: uncharacterized protein LOC105111104, partial [Populus euphratica]" P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS82 Retrotransposon protein Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); "PF00078.26,PF13966.5,PF14111.5" Reverse transcriptase (RNA-dependent DNA polymerase)|zinc-binding in reverse transcriptase|Domain of unknown function (DUF4283) TRINITY_DN22697_c0_g2_i1 80.18293562 22.33138408 138.0344872 6.181188172 2.627884185 9.10E-17 2.41E-15 Up 1.098878 0.8553357 1.82536 6.218542 5.961346 6.865963 ALM25790.1 cytochrome P450 728D17-like protein [Salvia pomifera] Q6WG30|T5H_TAXCU Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata OX=99806 PE=1 SV=2 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: heme binding (GO:0020037);|Biological Process: paclitaxel biosynthetic process (GO:0042617);|Molecular Function: taxadiene 5-alpha-hydroxylase activity (GO:0050604); PF00067.21 Cytochrome P450 TRINITY_DN22699_c0_g2_i1 43.50350455 65.07369221 21.93331688 0.337053518 -1.568950412 0.00393457 0.017232914 Down 4.668053 6.955071 9.588288 3.357189 0.7968679 1.656355 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22700_c0_g3_i2 96.26343173 27.75860555 164.7682579 5.935754143 2.569431337 1.91E-19 6.04E-18 Up 2.453479 1.963425 2.838267 11.93863 10.7955 12.297 PIN17818.1 hypothetical protein CDL12_09522 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YW3V NA -- -- -- TRINITY_DN22702_c0_g3_i1 7.611716469 2.564326842 12.65910609 4.936619578 2.303523474 0.018607625 0.063839159 Up 0.9881646 0.4915885 0 1.212164 2.456005 2.486176 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22703_c1_g1_i2 71.15457304 42.04491384 100.2642322 2.384693488 1.253803844 0.000718178 0.003892102 Up 2.974498 2.627721 1.491059 5.472757 3.066909 5.060212 XP_012830467.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Erythranthe guttata] C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana OX=3702 GN=EFR PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- PF08263.11 Leucine rich repeat N-terminal domain TRINITY_DN22706_c2_g1_i1 28.31497496 41.4376545 15.19229543 0.366630197 -1.447602479 0.003196995 0.014428433 Down 3.615935 1.90259 3.68754 0.7320276 1.151007 0.8720036 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22710_c1_g1_i1 6.110648447 0 12.22129689 Inf Inf 8.07E-05 0.000545999 Up 0 0.01907803 4.69E-47 2.446756 1.662208 1.372483 -- -- -- -- sot:102592377 K13420 FLS2 LRR receptor-like serine/threonine-protein kinase FLS2 ko04626 Plant-pathogen interaction -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22711_c2_g1_i2 46.81990685 22.91007567 70.72973803 3.087276492 1.626334694 1.31E-05 0.000103644 Up 2.987171 2.139768 1.301894 5.091949 4.937909 5.974976 XP_012847533.1 PREDICTED: nudix hydrolase 1 [Erythranthe guttata] Q9CA40|NUDT1_ARATH Nudix hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=NUDT1 PE=1 SV=1 sind:105161436 K03574 "mutT, NUDT15, MTH2" 8-oxo-dGTP diphosphatase -- -- -- -- -- -- -- F COG1051 NUDiX hydrolase "Molecular Function: NAD+ diphosphatase activity (GO:0000210);|Cellular Component: cytosol (GO:0005829);|Biological Process: dGTP catabolic process (GO:0006203);|Biological Process: cellular response to DNA damage stimulus (GO:0006974);|Molecular Function: 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity (GO:0008413);|Molecular Function: dihydroneopterin triphosphate pyrophosphohydrolase activity (GO:0019177);|Molecular Function: 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity (GO:0035539);|Molecular Function: metal ion binding (GO:0046872);" PF00293.27 NUDIX domain TRINITY_DN22714_c0_g1_i7 132.9192643 203.7411175 62.09741111 0.304785857 -1.714132136 1.23E-05 9.83E-05 Down 7.041293 12.99077 11.20509 2.86172 2.232534 2.616437 PHT32637.1 Protein ENHANCED DISEASE RESISTANCE 2 [Capsicum baccatum] F4JSE7|EDR2_ARATH Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=EDR2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4112846 "Domain containing protein, expressed" Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: response to ethylene (GO:0009723);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Cellular Component: endosome membrane (GO:0010008);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: phosphatidylinositol-4-phosphate binding (GO:0070273);|Biological Process: negative regulation of leaf senescence (GO:1900056);|Biological Process: regulation of defense response to fungus (GO:1900150); -- -- TRINITY_DN22715_c0_g5_i1 49.23589991 96.19362806 2.278171756 0.023683188 -5.399992908 1.77E-24 7.50E-23 Down 11.51975 9.952668 9.994619 0.2021442 0 0.3706712 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22721_c0_g2_i1 6.282623709 10.7277015 1.837545922 0.171289807 -2.54548879 0.030437127 0.095324444 Down 2.127448 0.5592275 2.25799 0.6399921 0.000112955 1.50E-37 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22721_c0_g3_i14 132.7457204 182.0597291 83.43171163 0.458265604 -1.125744091 0.001297392 0.00657136 Down 8.984103 5.613707 7.697166 3.780702 2.772474 1.648961 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22733_c0_g1_i2 392.7694761 238.0941531 547.444799 2.299278634 1.201181307 1.98E-18 5.85E-17 Up 10.92012 10.11023 9.36559 18.22904 19.45065 18.78782 PIN23168.1 "Glucan endo-1,3-beta-D-glucosidase [Handroanthus impetiginosus]" Q9FJU9|E1313_ARATH "Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590 PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- G ENOG410Y94B glucan endo-1-3-beta-glucosidase "Cellular Component: extracellular region (GO:0005576);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: defense response (GO:0006952);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: anchored component of membrane (GO:0031225);|Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);|Cellular Component: anchored component of plasma membrane (GO:0046658);|Biological Process: cell wall organization (GO:0071555);" "PF00332.17,PF07983.12" Glycosyl hydrolases family 17|X8 domain TRINITY_DN22734_c0_g1_i1 11.53735881 21.98801192 1.086705707 0.049422645 -4.338683968 1.45E-05 0.000114122 Down 2.541387 4.501387 4.224181 0 0.3836452 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22734_c0_g2_i1 81.73973029 140.0089829 23.47047769 0.167635513 -2.576600283 1.25E-16 3.26E-15 Down 8.755924 7.85614 9.039759 0.8619497 1.245897 1.416869 PIN24066.1 hypothetical protein CDL12_03187 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41115QU cAMP-regulated phosphoprotein/endosulfine conserved region -- PF04667.16 cAMP-regulated phosphoprotein/endosulfine conserved region TRINITY_DN22743_c0_g1_i2 88.33886383 158.5741858 18.10354184 0.114164495 -3.130814051 3.73E-07 3.82E-06 Down 8.376314 17.84231 17.01119 1.406258 1.619246 0.9464978 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22745_c0_g2_i1 9.637975095 15.50946253 3.766487655 0.242850946 -2.041856986 0.021875099 0.072809531 Down 2.452965 3.16828 3.162704 0.7912366 0 0.8143165 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22747_c1_g1_i2 17.3118255 25.1085058 9.515145201 0.378961029 -1.3998786 0.034874394 0.106488185 Down 2.303076 2.632721 4.54414 0.5852849 1.930288 0.4132138 PIN08506.1 Serine/threonine protein kinase [Handroanthus impetiginosus] P93604|LRK10_WHEAT Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN22747_c2_g2_i6 85.38307657 128.3678174 42.39833571 0.330287891 -1.598204016 2.72E-08 3.25E-07 Down 4.111308 4.133949 4.016549 1.245493 0.9155522 1.109843 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22747_c4_g1_i1 37.86146272 53.8922709 21.83065454 0.405079507 -1.303722993 0.001918737 0.009281463 Down 7.690362 4.297174 8.280373 2.237288 2.611438 1.818219 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22754_c0_g1_i7 185.0739003 108.2607513 261.8870493 2.419039643 1.274434412 4.60E-11 7.62E-10 Up 4.108306 6.113967 4.800248 9.655612 10.52084 9.101381 XP_011095277.1 zinc finger protein CONSTANS-LIKE 4-like [Sesamum indicum] Q9LJB7|BBX32_ARATH B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YSB4 zinc finger "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: photomorphogenesis (GO:0009640);|Biological Process: blue light signaling pathway (GO:0009785);|Biological Process: regulation of flower development (GO:0009909);|Biological Process: red or far-red light signaling pathway (GO:0010017);|Biological Process: response to chitin (GO:0010200);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);" PF00643.23 B-box zinc finger TRINITY_DN22766_c0_g1_i8 278.3057238 546.5822007 10.029247 0.018349019 -5.768153282 1.68E-129 5.99E-127 Down 10.5756 9.959191 10.09484 0.1091225 0.1850562 0.1516683 XP_011096562.1 dammarenediol II synthase-like [Sesamum indicum] Q08IT1|DADIS_PANGI Dammarenediol II synthase OS=Panax ginseng OX=4054 GN=PNA PE=1 SV=1 sind:105175714 K15813 LUP4 beta-amyrin synthase ko00909 Sesquiterpenoid and triterpenoid biosynthesis KOG0497 Oxidosqualene-lanosterol cyclase and related proteins [I] METABOLISM Lipid transport and metabolism I COG1657 Squalene--hopene cyclase Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: lyase activity (GO:0016829);|Molecular Function: intramolecular transferase activity (GO:0016866); "PF13249.5,PF13243.5,PF00432.20" Squalene-hopene cyclase N-terminal domain|Squalene-hopene cyclase C-terminal domain|Prenyltransferase and squalene oxidase repeat TRINITY_DN22768_c0_g1_i1 11.76722172 21.31638312 2.21806032 0.104054253 -3.264592163 0.00027849 0.001674811 Down 2.329338 1.784092 1.477516 0.2921472 0.07333999 0.08566403 EYU23414.1 hypothetical protein MIMGU_mgv1a020543mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22771_c0_g2_i1 49.48145451 76.39316947 22.56973955 0.295441853 -1.759053878 2.20E-06 1.99E-05 Down 6.853344 9.402801 10.44283 2.061351 0.8732685 3.386392 XP_011094060.1 galacturonokinase [Sesamum indicum] -- -- sind:105173859 K18677 GALAK galacturonokinase ko00520 Amino sugar and nucleotide sugar metabolism -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22779_c0_g2_i1 30.87388383 44.39716402 17.35060363 0.390804323 -1.355481669 0.008531693 0.033383253 Down 12.05206 6.515577 7.958293 4.508143 2.327489 1.489511 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22784_c0_g1_i2 187.1019524 349.9532711 24.25063363 0.069296777 -3.851067945 3.84E-60 5.46E-58 Down 17.22155 16.76696 15.30877 0.2913819 1.867448 0.567101 PIN05375.1 hypothetical protein CDL12_22092 [Handroanthus impetiginosus] Q6Z8K4|MUB3_ORYSJ Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG4111627 membrane-anchored ubiquitin-fold protein 3-like Cellular Component: plasma membrane (GO:0005886); PF13881.5 Ubiquitin-2 like Rad60 SUMO-like TRINITY_DN22784_c0_g3_i6 77.55050572 142.5450564 12.55595508 0.088084115 -3.504974328 3.21E-06 2.84E-05 Down 12.98063 7.324191 6.130513 0.4009137 0.1318749 1.43132 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2278_c0_g1_i1 8.633668211 13.53494978 3.732386646 0.27575918 -1.858519183 0.048862354 0.139086276 Down 0.6829863 1.36501 1.080134 0.1880409 0.1869872 0.2660528 PNX97977.1 "hypothetical protein L195_g021217, partial [Trifolium pratense]" P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN22796_c2_g2_i1 22.17765939 37.99307304 6.36224574 0.167458045 -2.578128406 1.86E-05 0.000143028 Down 3.867945 5.455827 3.895144 0.292715 0.5841453 0.9066661 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22799_c0_g2_i1 48.78018166 69.64200979 27.91835353 0.4008838 -1.318743976 0.00476685 0.020361494 Down 6.682977 3.707749 6.639921 2.097389 2.597819 0.7833841 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22799_c0_g5_i2 165.9856036 259.9932397 71.9779675 0.276845535 -1.852846841 3.02E-18 8.82E-17 Down 8.502 10.50199 8.507233 2.547576 1.782865 1.817473 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22799_c0_g6_i1 238.62368 323.7952777 153.4520824 0.473916987 -1.077293721 3.36E-07 3.45E-06 Down 9.699205 9.578763 12.75513 4.413905 4.238164 3.56061 XP_021733293.1 uncharacterized protein LOC110700113 [Chenopodium quinoa] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22803_c0_g4_i3 26.09274589 47.75746173 4.428030057 0.092719125 -3.43098924 8.40E-09 1.07E-07 Down 2.386631 2.663249 2.580039 0.08859597 0.331226 0.1333286 XP_011101471.1 embryonic protein DC-8 [Sesamum indicum] P20075|LEAD8_DAUCA Embryonic protein DC-8 OS=Daucus carota OX=4039 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z04U Embryonic protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: cytoplasm (GO:0005737); PF02987.15 Late embryogenesis abundant protein TRINITY_DN22803_c0_g5_i2 14.90462519 23.85634609 5.952904282 0.249531268 -2.00270749 0.0050079 0.021233291 Down 4.831348 3.693786 4.117685 0.5160475 1.0389 1.045924 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22805_c0_g2_i1 8.707784799 14.41292737 3.002642227 0.208329797 -2.263058898 0.019812224 0.067290804 Down 2.273934 1.721271 1.605957 0.2573542 0.2555367 0.5241905 PIN15886.1 "Pyruvate dehydrogenase E1, beta subunit [Handroanthus impetiginosus]" -- -- sind:105176884 K00162 "PDHB, pdhB" pyruvate dehydrogenase E1 component beta subunit ko00620|ko00020|ko00010 Pyruvate metabolism|Citrate cycle (TCA cycle)|Glycolysis / Gluconeogenesis -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22811_c0_g1_i4 1237.432523 494.4102066 1980.45484 4.005691657 2.002051372 1.24E-104 3.32E-102 Up 22.77625 23.89438 22.57797 73.01287 72.92211 77.92966 PIN04161.1 "Protein involved in vacuolar polyphosphate accumulation, contains SPX domain [Handroanthus impetiginosus]" O48781|SPX2_ARATH SPX domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SPX2 PE=2 SV=1 -- -- -- -- -- -- KOG1161 "Protein involved in vacuolar polyphosphate accumulation, contains SPX domain" [P] METABOLISM Inorganic ion transport and metabolism T ENOG4111K3Y positive regulation of cellular response to phosphate starvation Cellular Component: nucleus (GO:0005634);|Biological Process: cellular response to phosphate starvation (GO:0016036); PF03105.18 SPX domain TRINITY_DN22811_c0_g2_i3 46.37164055 9.286953591 83.4563275 8.986405142 3.167744106 2.40E-11 4.10E-10 Up 0.6292677 0.3056853 1.948245 4.942889 7.325798 8.276025 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22811_c0_g3_i3 13.20202614 25.66903391 0.735018369 0.028634438 -5.126104884 5.28E-07 5.28E-06 Down 4.36863 3.472694 2.955899 0.1962851 0 9.60E-93 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22813_c0_g4_i1 26.00760052 38.7245869 13.29061413 0.343208674 -1.542842079 0.010648283 0.040069427 Down 5.121752 5.000599 7.657998 0 1.249206 3.699459 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22814_c1_g1_i1 18.1683907 34.07688881 2.259892593 0.066317457 -3.914467513 1.72E-07 1.84E-06 Down 7.423545 6.656257 7.549983 0.65387 0 0.6546626 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22820_c0_g1_i3 631.8735964 405.2872538 858.4599389 2.118151831 1.082806007 1.66E-21 6.03E-20 Up 21.64946 21.03353 22.53844 36.4377 38.51686 36.50024 PIN09581.1 "Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Handroanthus impetiginosus]" Q9SPK4|PPCK1_ARATH Phosphoenolpyruvate carboxylase kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PPCK1 PE=1 SV=1 -- -- -- -- -- -- KOG0032 "Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily" [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XRMJ calcium-dependent protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: calmodulin-dependent protein kinase activity (GO:0004683);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: response to light stimulus (GO:0009416);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Molecular Function: calcium-dependent protein serine/threonine kinase activity (GO:0009931);|Biological Process: peptidyl-serine phosphorylation (GO:0018105);|Biological Process: intracellular signal transduction (GO:0035556);|Biological Process: response to cycloheximide (GO:0046898); "PF00069.24,PF07714.16,PF14531.5" Protein kinase domain|Protein tyrosine kinase|Kinase-like TRINITY_DN22822_c0_g4_i2 14.87988553 27.15346509 2.606305982 0.095984287 -3.381057941 0.023629352 0.077539737 Down 6.213187 1.321136 2.167483 0 0.3752689 0.3725684 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22822_c0_g6_i1 13.40120834 19.70760988 7.094806793 0.360003412 -1.473917516 0.044020841 0.128008926 Down 2.366553 4.106991 3.144591 1.227642 0.352958 1.032022 XP_012835356.1 "PREDICTED: calcium uniporter protein 6, mitochondrial-like [Erythranthe guttata]" F4I111|MCU6_ARATH "Calcium uniporter protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g09575 PE=2 SV=1" -- -- -- -- -- -- KOG2966 Uncharacterized conserved protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y3YU Coiled-coil domain containing 109B Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Molecular Function: uniporter activity (GO:0015292);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: mitochondrial calcium ion homeostasis (GO:0051560); -- -- TRINITY_DN22822_c0_g7_i1 5.750293391 11.50058678 0 0 #NAME? 0.000361893 0.002116659 Down 1.725289 3.231476 1.748922 0 0.028256 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22830_c1_g2_i2 123.4286519 168.2692302 78.58807364 0.467037696 -1.098389095 0.001100005 0.005679162 Down 15.29437 15.02531 19.42541 4.749207 3.739749 10.28984 XP_011084986.1 17.3 kDa class I heat shock protein-like [Sesamum indicum] Q84Q77|HS17A_ORYSJ 17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP17.9A PE=1 SV=1 sind:105167109 K13993 HSP20 HSP20 family protein ko04141 Protein processing in endoplasmic reticulum KOG0710 Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0071 response to heat Biological Process: response to reactive oxygen species (GO:0000302);|Cellular Component: nucleus (GO:0005634);|Biological Process: protein folding (GO:0006457);|Biological Process: response to heat (GO:0009408);|Biological Process: response to salt stress (GO:0009651);|Biological Process: viral process (GO:0016032);|Biological Process: response to hydrogen peroxide (GO:0042542);|Molecular Function: protein self-association (GO:0043621);|Molecular Function: unfolded protein binding (GO:0051082);|Biological Process: protein complex oligomerization (GO:0051259); PF00011.20 Hsp20/alpha crystallin family TRINITY_DN22833_c0_g1_i5 136.7715577 41.34340417 232.1997112 5.616366524 2.489637089 1.00E-25 4.54E-24 Up 2.060778 2.538957 2.118165 10.29759 9.971173 10.14211 PIN03764.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9ZR08|Y4230_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana OX=3702 GN=At4g03230 PE=3 SV=3 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN22833_c0_g4_i1 48.31889774 25.98380349 70.653992 2.719155108 1.443158449 0.039689783 0.117877409 Up 6.268088 4.515658 5.98743 19.62872 8.851922 7.872337 PIN03764.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN22837_c1_g2_i11 39.95628486 63.14301991 16.76954982 0.265580421 -1.912779301 7.72E-06 6.38E-05 Down 3.496713 2.329437 2.675123 0.5202757 0.5987543 0.7014643 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22837_c1_g3_i3 162.3973751 238.8032648 85.99148548 0.360093425 -1.473556838 1.83E-12 3.47E-11 Down 9.492966 8.568738 8.676393 2.31778 2.00521 3.471882 BAH91263.1 "Os01g0708400, partial [Oryza sativa Japonica Group]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22837_c2_g2_i1 108.7745506 148.1087063 69.44039491 0.468847488 -1.092809392 1.14E-05 9.11E-05 Down 6.847066 5.457314 6.158496 2.234733 1.859309 2.901923 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22841_c0_g1_i1 121.1494316 179.678369 62.62049419 0.348514374 -1.520709938 6.46E-09 8.35E-08 Down 14.75235 19.1121 15.33765 4.385176 2.7243 6.722544 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22848_c0_g2_i4 40.39862284 71.01246836 9.784777322 0.137789568 -2.859461431 2.44E-10 3.72E-09 Down 5.636142 3.6035 4.594932 0.3760149 0.2813892 0.8755098 XP_011084842.1 mini-chromosome maintenance complex-binding protein isoform X1 [Sesamum indicum] Q501D5|MCMBP_ARATH Mini-chromosome maintenance complex-binding protein OS=Arabidopsis thaliana OX=3702 GN=ETG1 PE=1 SV=1 -- -- -- -- -- -- KOG2545 Conserved membrane protein [S] POORLY CHARACTERIZED Function unknown S ENOG410XNU0 Minichromosome maintenance complex binding protein Cellular Component: nuclear chromatin (GO:0000790);|Molecular Function: chromatin binding (GO:0003682);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA replication (GO:0006260);|Biological Process: DNA-dependent DNA replication (GO:0006261);|Biological Process: postreplication repair (GO:0006301);|Biological Process: sister chromatid cohesion (GO:0007062);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: MCM complex (GO:0042555);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN22859_c0_g1_i2 142.6438565 202.6583311 82.62938194 0.407727536 -1.294322703 5.75E-09 7.47E-08 Down 8.520313 8.742936 8.438881 3.092598 2.960304 2.417139 XP_011078730.1 trihelix transcription factor GTL2 [Sesamum indicum] Q8H181|GTL2_ARATH Trihelix transcription factor GTL2 OS=Arabidopsis thaliana OX=3702 GN=At5g28300 PE=2 SV=1 -- -- -- -- -- -- KOG4282 "Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain" [K] INFORMATION STORAGE AND PROCESSING Transcription K ENOG410YYXY Transcription factor "Molecular Function: enhancer sequence-specific DNA binding (GO:0001158);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);" "PF13837.5,PF13921.5" Myb/SANT-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN22886_c0_g1_i7 94.54107259 62.68262718 126.399518 2.016500005 1.011853409 0.000105024 0.00069313 Up 4.355222 3.022684 2.985015 5.974931 5.137895 5.75995 XP_011089079.1 RPM1-interacting protein 4-like [Sesamum indicum] Q8GYN5|RIN4_ARATH RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1 sind:105170142 K13456 RIN4 RPM1-interacting protein 4 ko04626 Plant-pathogen interaction -- -- -- -- -- S ENOG410YR29 RPM1-interacting protein "Biological Process: response to molecule of bacterial origin (GO:0002237);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);|Biological Process: defense response signaling pathway, resistance gene-independent (GO:0010204);|Cellular Component: endomembrane system (GO:0012505);|Cellular Component: membrane (GO:0016020);|Cellular Component: extrinsic component of plasma membrane (GO:0019897);|Biological Process: negative regulation of plant-type hypersensitive response (GO:0034051);" PF05627.10 Cleavage site for pathogenic type III effector avirulence factor Avr TRINITY_DN22895_c0_g2_i4 31.4719666 17.39708128 45.54685192 2.61807433 1.388506058 0.002950828 0.013470126 Up 0.7237316 0.6117033 0.6981523 0.9983973 1.446718 1.885659 XP_019181774.1 PREDICTED: uncharacterized protein LOC109176829 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03732.16 Retrotransposon gag protein TRINITY_DN22895_c0_g5_i2 8.420457122 16.84091424 0 0 #NAME? 2.51E-05 0.000187892 Down 3.15968 4.031137 1.045804 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2289_c0_g1_i1 4.963308257 9.926616514 0 0 #NAME? 0.001095031 0.005659426 Down 1.082303 1.843612 1.230528 0 0 0 ABM87499.1 "poly(A) binding protein, cytoplasmic 1, partial [synthetic construct]" Q2UK72|PABP_ASPOR "Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pab1 PE=3 SV=1" scm:SCHCODRAFT_66185 K13126 PABPC polyadenylate-binding protein ko03018|ko03015|ko03013 RNA degradation|mRNA surveillance pathway|RNA transport KOG0123 Polyadenylate-binding protein (RRM superfamily) [AJ] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING "RNA processing and modification |Translation, ribosomal structure and biogenesis " S ENOG410XR5X "poly(A) binding protein, cytoplasmic" Molecular Function: RNA binding (GO:0003723);|Biological Process: mRNA processing (GO:0006397);|Biological Process: mRNA export from nucleus (GO:0006406);|Biological Process: regulation of translation (GO:0006417);|Cellular Component: cytoplasmic stress granule (GO:0010494);|Cellular Component: post-mRNA release spliceosomal complex (GO:0071014); PF00076.21 "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" TRINITY_DN22902_c0_g1_i1 7.317735515 13.09231764 1.543153387 0.11786709 -3.084767135 0.005609412 0.023385507 Down 2.807064 2.072062 3.381629 0 4.00E-88 0.7735689 -- -- Q8W4G3|DTX46_ARATH "Protein DETOXIFICATION 46, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX46 PE=2 SV=1" -- -- -- -- -- -- KOG1347 "Uncharacterized membrane protein, predicted efflux pump" [R] POORLY CHARACTERIZED General function prediction only -- -- -- Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast envelope (GO:0009941);|Molecular Function: drug transmembrane transporter activity (GO:0015238);|Molecular Function: antiporter activity (GO:0015297);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: chloroplast membrane (GO:0031969); -- -- TRINITY_DN22903_c1_g2_i2 44.75541638 72.39205292 17.11877985 0.236473192 -2.080251453 2.62E-07 2.74E-06 Down 4.999672 5.859288 6.259297 1.057895 1.06189 1.168404 XP_022847769.1 gibberellin 2-beta-dioxygenase-like [Olea europaea var. sylvestris] Q9XFR9|G2OX2_ARATH Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana OX=3702 GN=GA2OX2 PE=2 SV=1 gmx:100806026 K04125 E1.14.11.13 gibberellin 2-oxidase ko00904 Diterpenoid biosynthesis KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: response to red or far red light (GO:0009639);|Biological Process: gibberellin biosynthetic process (GO:0009686);|Biological Process: response to red light (GO:0010114);|Biological Process: gibberellin catabolic process (GO:0045487);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213);|Molecular Function: C-19 gibberellin 2-beta-dioxygenase activity (GO:0052634); -- -- TRINITY_DN22907_c0_g1_i3 74.55447843 144.3028697 4.806087139 0.033305555 -4.908093374 2.02E-33 1.28E-31 Down 6.589619 7.76356 7.666947 0.2291315 0.2276035 0.1481529 ASM61954.1 iridoid synthase [Antirrhinum majus] K7WDL7|IRIS_CATRO Iridoid synthase OS=Catharanthus roseus OX=4058 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XPIJ epimerase dehydratase "Cellular Component: cytosol (GO:0005829);|Biological Process: monoterpenoid biosynthetic process (GO:0016099);|Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (GO:0016628);|Molecular Function: identical protein binding (GO:0042802);|Molecular Function: protein homodimerization activity (GO:0042803);" -- -- TRINITY_DN22909_c4_g1_i3 104.6848965 140.84636 68.52343291 0.486511919 -1.039452945 4.66E-05 0.000332251 Down 5.511835 6.097225 5.784791 2.302534 2.588258 1.953213 PIN04326.1 Very-long-chain 3-oxoacyl-CoA synthase [Handroanthus impetiginosus] Q9LZ72|KCS19_ARATH 3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana OX=3702 GN=KCS19 PE=2 SV=1 rcu:8262681 K15397 KCS 3-ketoacyl-CoA synthase ko00062 Fatty acid elongation -- -- -- -- -- I ENOG411183H 3-ketoacyl-coa synthase Biological Process: fatty acid biosynthetic process (GO:0006633);|Biological Process: response to cold (GO:0009409);|Biological Process: response to light stimulus (GO:0009416);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: 3-oxo-arachidoyl-CoA synthase activity (GO:0102336);|Molecular Function: 3-oxo-cerotoyl-CoA synthase activity (GO:0102337);|Molecular Function: 3-oxo-lignoceronyl-CoA synthase activity (GO:0102338);|Molecular Function: very-long-chain 3-ketoacyl-CoA synthase activity (GO:0102756); "PF08392.11,PF08541.9,PF02797.14" "FAE1/Type III polyketide synthase-like protein|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal|Chalcone and stilbene synthases, C-terminal domain" TRINITY_DN22915_c0_g1_i4 1567.87678 1032.852994 2102.900567 2.036011495 1.025745706 1.52E-35 1.03E-33 Up 19.82903 19.41207 19.07666 31.7739 32.31752 31.69084 PIN17257.1 Cation transport ATPase [Handroanthus impetiginosus] Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1 OS=Arabidopsis thaliana OX=3702 GN=RAN1 PE=1 SV=1 -- -- -- -- -- -- KOG0207 Cation transport ATPase [P] METABOLISM Inorganic ion transport and metabolism P COG2217 p-type ATPase Molecular Function: copper ion binding (GO:0005507);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: endosome (GO:0005768);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Biological Process: response to ethylene (GO:0009723);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: regulation of stomatal movement (GO:0010119);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: copper-transporting ATPase activity (GO:0043682); "PF00122.19,PF00702.25,PF00403.25" E1-E2 ATPase|haloacid dehalogenase-like hydrolase|Heavy-metal-associated domain TRINITY_DN22927_c0_g1_i1 164.1066173 242.9029927 85.31024184 0.35121116 -1.509589406 3.60E-10 5.39E-09 Down 41.01175 34.12832 34.27509 15.25859 7.269693 8.358048 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22928_c0_g2_i2 11.93233195 23.14019344 0.724470471 0.031307883 -4.997330227 2.06E-06 1.88E-05 Down 2.478144 2.84303 4.033739 1.02E-48 0.1781965 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22930_c0_g3_i1 15.81934255 26.6469897 4.991695396 0.187326803 -2.416370756 0.000533855 0.002991412 Down 2.133913 2.016826 2.176198 3.84E-11 0.08655847 0.9155869 XP_011080416.1 rust resistance kinase Lr10-like [Sesamum indicum] P93604|LRK10_WHEAT Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN22933_c0_g2_i1 23.39996351 11.02203058 35.77789644 3.246034947 1.698678532 0.001592019 0.007876458 Up 0.5914606 0.996912 0.4766708 1.382438 1.859487 2.184891 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22933_c0_g4_i1 689.8861263 1036.296226 343.4760265 0.331445795 -1.593155145 2.84E-45 2.68E-43 Down 60.09459 60.80158 53.76237 15.6615 14.20797 16.87896 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22937_c0_g1_i1 76.95460301 8.8864111 145.0227949 16.31961354 4.028534989 7.44E-29 4.02E-27 Up 0.2434622 0.5491217 1.16488 9.595873 6.982969 8.465518 XP_011096132.1 trans-alpha-bergamotene synthase-like [Sesamum indicum] Q2XSC4|LABER_LAVAN Exo-alpha-bergamotene synthase OS=Lavandula angustifolia OX=39329 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YF98 synthase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: terpene synthase activity (GO:0010333); "PF01397.20,PF03936.15" "Terpene synthase, N-terminal domain|Terpene synthase family, metal binding domain" TRINITY_DN22937_c0_g2_i2 40.71439775 10.97570223 70.45309327 6.419005529 2.682349804 3.42E-10 5.13E-09 Up 1.581581 1.390823 0.5470377 7.561733 5.321665 5.17375 XP_011096132.1 trans-alpha-bergamotene synthase-like [Sesamum indicum] Q2XSC4|LABER_LAVAN Exo-alpha-bergamotene synthase OS=Lavandula angustifolia OX=39329 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YF98 synthase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: terpene synthase activity (GO:0010333); PF01397.20 "Terpene synthase, N-terminal domain" TRINITY_DN22937_c0_g3_i2 65.97538873 14.80683177 117.1439457 7.911479482 2.98394751 7.83E-17 2.08E-15 Up 0.4020081 1.271311 1.918787 7.346594 7.491087 8.157639 XP_011096132.1 trans-alpha-bergamotene synthase-like [Sesamum indicum] J7LQ09|TPS7_PHYDL Trans-alpha-bergamotene synthase OS=Phyla dulcis OX=542674 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate catabolic process (GO:0045339);|Biological Process: (-)-exo-alpha-bergamotene biosynthetic process (GO:1901940); PF01397.20 "Terpene synthase, N-terminal domain" TRINITY_DN22937_c1_g1_i3 254.9303987 75.75054613 434.1102512 5.730787082 2.518733296 1.74E-45 1.65E-43 Up 2.444006 2.776011 2.366073 12.17059 11.53157 11.39945 AIS39009.1 terpene synthase 12 [Salvia miltiorrhiza] J7LQ09|TPS7_PHYDL Trans-alpha-bergamotene synthase OS=Phyla dulcis OX=542674 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YF98 synthase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate catabolic process (GO:0045339);|Biological Process: (-)-exo-alpha-bergamotene biosynthetic process (GO:1901940); "PF03936.15,PF01397.20" "Terpene synthase family, metal binding domain|Terpene synthase, N-terminal domain" TRINITY_DN22939_c0_g2_i1 16.82510754 25.84394303 7.80627205 0.30205422 -1.727120553 0.007725165 0.030702881 Down 3.067952 3.849795 4.844487 1.435584 0.4757673 0.9406583 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22951_c0_g1_i4 191.2079086 109.2658205 273.1499966 2.499866795 1.321851223 8.42E-12 1.50E-10 Up 6.036647 4.474757 6.233505 10.96813 10.51303 12.31698 PIN21671.1 hypothetical protein CDL12_05629 [Handroanthus impetiginosus] Q9FLX4|MAKR5_ARATH Probable membrane-associated kinase regulator 5 OS=Arabidopsis thaliana OX=3702 GN=MAKR5 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG411176B membrane-associated kinase regulator Cellular Component: plasma membrane (GO:0005886); -- -- TRINITY_DN22955_c0_g2_i4 76.55547815 152.3393796 0.771576693 0.005064854 -7.625263645 1.66E-44 1.54E-42 Down 11.63641 9.946173 8.647065 0 1.51E-101 0.1229678 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22955_c0_g4_i1 14.04943005 28.0988601 0 0 #NAME? 1.58E-09 2.20E-08 Down 1.724133 1.642687 2.802677 7.79E-52 6.16E-78 5.36E-20 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22955_c1_g2_i1 12.64831323 21.10779213 4.188834327 0.198449667 -2.333154951 0.003342437 0.014989455 Down 3.137123 4.833934 2.435147 0.4572237 0 1.26808 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22961_c0_g1_i2 55.58611574 88.16995668 23.00227481 0.260885631 -1.938510608 4.91E-08 5.65E-07 Down 9.833548 10.63713 12.57648 1.198524 1.49465 4.310044 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22961_c0_g2_i1 5.345888712 10.69177742 0 0 #NAME? 0.000609351 0.003362131 Down 1.524522 1.707399 1.732429 2.15E-25 0 1.38E-32 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22961_c1_g1_i11 417.8756895 638.8460708 196.9053081 0.308220269 -1.697966354 3.52E-16 8.87E-15 Down 58.02987 71.03402 54.86756 18.9368 15.04141 11.61298 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22961_c2_g1_i1 19.91891856 34.61713457 5.220702546 0.150812672 -2.729170443 0.016475053 0.05766459 Down 3.364997 3.326744 10.1725 0.8317368 0.4136582 0.7757153 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22964_c0_g4_i1 127.6069553 178.9784181 76.23549251 0.425947962 -1.231250906 1.29E-07 1.40E-06 Down 22.85843 30.64271 27.31744 9.834293 10.45333 7.481561 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22976_c1_g2_i1 30.07628466 47.09431035 13.05825897 0.277278909 -1.850590214 0.003248044 0.014626833 Down 7.213059 2.723542 6.381627 1.410294 0.8292255 1.467251 XP_017233167.1 "PREDICTED: uncharacterized protein LOC108207215, partial [Daucus carota subsp. sativus]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN22976_c1_g3_i3 30.70318049 42.40292898 19.00343199 0.448163192 -1.157903932 0.014533063 0.052051393 Down 4.167674 2.854903 3.223233 1.458128 0.9190272 1.353219 XP_017233167.1 "PREDICTED: uncharacterized protein LOC108207215, partial [Daucus carota subsp. sativus]" P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN22976_c1_g4_i1 32.71901194 63.2252375 2.212786371 0.034998467 -4.836564471 3.09E-15 7.30E-14 Down 2.477461 2.779997 2.391256 0.1040174 0.0528561 0.05427958 XP_017233167.1 "PREDICTED: uncharacterized protein LOC108207215, partial [Daucus carota subsp. sativus]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN22977_c0_g1_i7 130.0526427 260.1052854 0 0 #NAME? 5.80E-80 1.18E-77 Down 6.101909 5.45817 5.970161 0 0 0 XP_011101998.1 uncharacterized protein LOC105180029 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG4585 Predicted transposase [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG411206Y transposon protein -- -- -- TRINITY_DN22979_c1_g1_i13 314.7533029 156.7516886 472.7549172 3.015947843 1.592611479 8.01E-25 3.45E-23 Up 5.686732 7.443448 6.681058 15.10138 16.36838 16.67684 XP_022898092.1 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Olea europaea var. sylvestris] Q9XIC7|SERK2_ARATH Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=SERK2 PE=1 SV=1 rcu:8277786 K13416 BAK1 brassinosteroid insensitive 1-associated receptor kinase 1 ko04626|ko04075 Plant-pathogen interaction|Plant hormone signal transduction -- -- -- -- -- T ENOG410ZNK7 Somatic embryogenesis receptor kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN2297_c0_g1_i1 16.28559796 23.37891099 9.192284923 0.393187045 -1.346712308 0.040163959 0.119028698 Down 1.391005 1.337186 1.805124 0.4842384 0.7539872 0.234498 XP_011099492.1 putative E3 ubiquitin-protein ligase SINA-like 6 [Sesamum indicum] Q84K34|SIL10_ARATH E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana OX=3702 GN=At5g37930 PE=2 SV=1 sind:105177902 K04506 SIAH1 E3 ubiquitin-protein ligase SIAH1 ko04120 Ubiquitin mediated proteolysis KOG3002 Zn finger protein [R] POORLY CHARACTERIZED General function prediction only O ENOG410XVP0 e3 ubiquitin-protein ligase Cellular Component: nucleus (GO:0005634);|Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);|Biological Process: multicellular organism development (GO:0007275);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transferase activity (GO:0016740); PF03145.15 Seven in absentia protein family TRINITY_DN22981_c0_g1_i1 33.78598546 7.111609037 60.46036189 8.501643098 3.087741695 0.010624499 0.040009891 Up 0.7121529 1.148781 2.409701 14.95674 13.08903 2.160176 XP_024164189.1 uncharacterized protein LOC112171207 [Rosa chinensis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF00665.25 Integrase core domain TRINITY_DN22981_c1_g6_i2 25.33448694 47.29354851 3.37542536 0.071371793 -3.808502171 9.48E-10 1.35E-08 Down 2.053935 2.552333 2.747415 0.198378 0.04151081 0.1801873 XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=3 SV=2 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" PF00665.25 Integrase core domain TRINITY_DN22982_c0_g1_i1 74.5115733 100.6710586 48.35208798 0.4802978 -1.057998895 0.000561499 0.003132372 Down 4.743034 4.091239 3.848166 1.507098 2.213542 1.146359 XP_012850380.1 PREDICTED: probable kinetochore protein NUF2 [Erythranthe guttata] Q8RXJ0|NUF2_ARATH Kinetochore protein NUF2 homolog OS=Arabidopsis thaliana OX=3702 GN=NUF2 PE=1 SV=1 sind:105169140 K11548 "NUF2, CDCA1" kinetochore protein Nuf2 -- -- KOG4438 Centromere-associated protein NUF2 [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " S ENOG410ZI4C "NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)" Cellular Component: condensed nuclear chromosome kinetochore (GO:0000778);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: mitotic spindle organization (GO:0007052);|Cellular Component: Ndc80 complex (GO:0031262);|Biological Process: meiotic chromosome segregation (GO:0045132);|Biological Process: cell division (GO:0051301);|Biological Process: attachment of mitotic spindle microtubules to kinetochore (GO:0051315);|Biological Process: kinetochore organization (GO:0051383); PF03800.13 Nuf2 family TRINITY_DN22987_c0_g2_i1 7.379343732 13.61960159 1.139085878 0.083635771 -3.579736077 0.004345968 0.018811529 Down 2.790971 2.245447 0.6484451 0.06449683 4.81E-09 0.2811156 XP_011070636.1 LOW QUALITY PROTEIN: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Sesamum indicum] Q9SSJ8|FAB1C_ARATH Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 sind:105156256 K00921 "PIKFYVE, FAB1" 1-phosphatidylinositol-3-phosphate 5-kinase ko00562|ko04070|ko04145 Inositol phosphate metabolism|Phosphatidylinositol signaling system|Phagosome KOG0230 Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms O COG0459 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity) Molecular Function: 1-phosphatidylinositol-3-phosphate 5-kinase activity (GO:0000285);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: endosome membrane (GO:0010008);|Biological Process: phosphatidylinositol phosphorylation (GO:0046854);|Biological Process: stomatal closure (GO:0090332); -- -- TRINITY_DN22988_c0_g1_i2 6.133539826 11.89957047 0.367509184 0.03088424 -5.016985384 0.001142779 0.005874217 Down 0.6073409 1.659482 1.05763 0.06949366 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22988_c1_g4_i3 13.1229347 22.56586292 3.680006475 0.163078473 -2.616361739 0.001030021 0.005359438 Down 1.72924 2.268339 1.98027 0.1605539 0.4691397 0.1658898 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22991_c0_g1_i1 11.33997994 3.143298945 19.53666094 6.215336588 2.635832522 0.001756189 0.008585751 Up 0.4205947 0.4068926 0.6354254 2.13196 3.70971 1.627481 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN22992_c0_g1_i9 918.6758745 498.3284221 1339.023327 2.687029813 1.426012328 1.09E-46 1.07E-44 Up 30.92198 29.39864 28.76397 64.79162 62.71959 65.72826 PIN25733.1 hypothetical protein CDL12_01527 [Handroanthus impetiginosus] Q10S65|NAC22_ORYSJ NAC domain-containing protein 22 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC022 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y9QS nac domain "Cellular Component: nucleus (GO:0005634);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: positive regulation of response to salt stress (GO:1901002);|Biological Process: positive regulation of response to water deprivation (GO:1902584);" -- -- TRINITY_DN22994_c3_g2_i2 17.64674538 30.75824304 4.535247716 0.147448205 -2.761719838 5.67E-05 0.000396537 Down 3.70559 4.012787 3.222833 0 0.4538103 0.8865246 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23000_c1_g2_i1 14.01653338 7.150615894 20.88245087 2.920370941 1.54615163 0.038245615 0.114449416 Up 0.2409125 1.175371 1.477303 1.850061 2.271451 2.821185 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23012_c0_g1_i19 489.0506381 820.3721395 157.7291366 0.19226535 -2.37882931 5.30E-69 8.74E-67 Down 19.89358 18.50852 17.49762 2.724208 3.139472 2.805975 PNT07402.1 hypothetical protein POPTR_013G083900v3 [Populus trichocarpa] P08770|TRA1_MAIZE Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG410ZT99 Pfam:hATC Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: transposition (GO:0032196);|Molecular Function: protein dimerization activity (GO:0046983); "PF05699.13,PF14372.5" hAT family C-terminal dimerisation region|Domain of unknown function (DUF4413) TRINITY_DN23013_c0_g1_i1 6.774539772 1.275402478 12.27367707 9.623375585 3.266543036 0.004176726 0.018176027 Up 0.2973123 0.2914094 0 2.623539 1.047329 1.750638 XP_012829487.1 PREDICTED: lysine histidine transporter-like 8 [Erythranthe guttata] Q9SX98|LHTL8_ARATH Lysine histidine transporter-like 8 OS=Arabidopsis thaliana OX=3702 GN=AATL1 PE=1 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Cellular Component: integral component of membrane (GO:0016021); PF01490.17 Transmembrane amino acid transporter protein TRINITY_DN23013_c0_g2_i2 103.4754854 52.33374938 154.6172214 2.954445711 1.562887489 1.58E-09 2.19E-08 Up 1.908627 2.497838 2.038623 5.057712 4.482792 5.875711 XP_011099581.1 lysine histidine transporter-like 8 [Sesamum indicum] Q9SX98|LHTL8_ARATH Lysine histidine transporter-like 8 OS=Arabidopsis thaliana OX=3702 GN=AATL1 PE=1 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Cellular Component: integral component of membrane (GO:0016021); PF01490.17 Transmembrane amino acid transporter protein TRINITY_DN23015_c1_g2_i1 13.05474607 3.402859877 22.70663226 6.672808484 2.738294098 0.000568252 0.003164749 Up 0.8107896 0.3889653 0.9597129 2.394137 4.656794 4.664321 KDP36603.1 hypothetical protein JCGZ_08370 [Jatropha curcas] Q6JN47|EIX1_SOLLC Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); -- -- TRINITY_DN23017_c0_g4_i1 16.63480172 33.26960343 0 0 #NAME? 4.73E-11 7.83E-10 Down 3.769775 6.104539 4.827621 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23022_c0_g1_i7 103.9360988 140.7351369 67.13706072 0.477045478 -1.067801285 2.69E-05 0.000200995 Down 4.729091 3.969088 4.858199 1.60595 1.966789 1.635449 XP_011082963.1 probable sugar phosphate/phosphate translocator At1g06470 [Sesamum indicum] Q8H184|PT106_ARATH Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana OX=3702 GN=At1g06470 PE=2 SV=1 sind:105165597 K15280 SLC35C2 "solute carrier family 35, member C2" -- -- KOG1443 Predicted integral membrane protein [S] POORLY CHARACTERIZED Function unknown EG COG0697 membrane Cellular Component: endoplasmic reticulum-Golgi intermediate compartment (GO:0005793);|Biological Process: carbohydrate transport (GO:0008643);|Biological Process: UDP-glucose transmembrane transport (GO:0015786);|Cellular Component: integral component of membrane (GO:0016021); "PF03151.15,PF00892.19,PF08449.10" Triose-phosphate Transporter family|EamA-like transporter family|UAA transporter family TRINITY_DN23024_c0_g2_i1 11.35771414 21.98040991 0.735018369 0.033439703 -4.902294177 0.013892168 0.050151678 Down 3.597311 3.759977 6.49E-44 0.201722 4.71E-54 0 NP_001241200.1 uncharacterized protein LOC100790960 [Glycine max] Q9S7M0|CB3_ARATH "Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB3 PE=1 SV=1" gmx:100790960 K08914 LHCB3 light-harvesting complex II chlorophyll a/b binding protein 3 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- S ENOG410YAI6 Chlorophyll A-B binding protein "Molecular Function: structural molecule activity (GO:0005198);|Biological Process: response to light stimulus (GO:0009416);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: photosystem I (GO:0009522);|Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: thylakoid (GO:0009579);|Biological Process: response to herbicide (GO:0009635);|Biological Process: response to high light intensity (GO:0009644);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: photosynthesis, light harvesting in photosystem I (GO:0009768);|Biological Process: photosynthesis, light harvesting in photosystem II (GO:0009769);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: regulation of stomatal movement (GO:0010119);|Cellular Component: plastoglobule (GO:0010287);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: protein domain specific binding (GO:0019904);|Cellular Component: thylakoid membrane (GO:0042651);|Molecular Function: metal ion binding (GO:0046872);" PF00504.20 Chlorophyll A-B binding protein TRINITY_DN23025_c0_g1_i10 469.4909543 272.6236754 666.3582332 2.444241984 1.289387121 6.62E-24 2.73E-22 Up 11.55038 11.13969 10.81142 23.21465 22.97851 19.86988 XP_020551817.1 E3 ubiquitin-protein ligase RMA1H1 [Sesamum indicum] Q6R567|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1 sind:105167831 K10666 RNF5 E3 ubiquitin-protein ligase RNF5 ko04141 Protein processing in endoplasmic reticulum KOG0823 Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG4111IHV Ring finger protein Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to cold (GO:0009409);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to ethylene (GO:0009723);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);|Molecular Function: metal ion binding (GO:0046872); "PF00097.24,PF13923.5,PF13920.5,PF13445.5,PF13639.5,PF15227.5,PF14634.5" "Zinc finger, C3HC4 type (RING finger)|Zinc finger, C3HC4 type (RING finger)|Zinc finger, C3HC4 type (RING finger)|RING-type zinc-finger|Ring finger domain|zinc finger of C3HC4-type, RING|zinc-RING finger domain" TRINITY_DN23032_c4_g1_i2 38.53423977 14.09772009 62.97075945 4.466733562 2.159220201 0.010532234 0.039718345 Up 0.6717118 2.120488 0.9747474 7.489949 2.994017 3.252298 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23042_c0_g1_i1 476.6419856 313.4865617 639.7974096 2.040908568 1.029211551 4.25E-16 1.07E-14 Up 10.71251 10.33409 10.40423 15.95028 18.57047 17.24519 XP_011071763.1 protein EDS1B [Sesamum indicum] Q9SU71|EDSBC_ARATH Protein EDS1B OS=Arabidopsis thaliana OX=3702 GN=EDS1B PE=1 SV=1 sind:105157152 K18875 EDS1 enhanced disease susceptibility 1 protein ko04626 Plant-pathogen interaction -- -- -- -- -- S ENOG410YEK6 enhanced disease susceptibility 1 Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: lipid metabolic process (GO:0006629);|Biological Process: defense response (GO:0006952);|Molecular Function: hydrolase activity (GO:0016787); PF01764.24 Lipase (class 3) TRINITY_DN23047_c0_g1_i1 5.862121241 10.98922411 0.735018369 0.066885374 -3.902165415 0.006185714 0.025392304 Down 2.621394 1.991196 0.8720829 0.2383499 1.34E-53 7.73E-62 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23047_c2_g2_i1 12.76561467 22.22364669 3.307582659 0.148831679 -2.748246453 0.000709892 0.003851795 Down 3.504008 2.382197 4.008989 1.213121 1.93E-55 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23047_c2_g3_i1 25.96638077 35.5307209 16.40204064 0.46162983 -1.115191643 0.028320807 0.089981549 Down 2.806088 3.273925 3.197246 0.9492094 1.163829 1.381849 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2304_c0_g1_i1 15.47271408 30.22095769 0.724470471 0.023972452 -5.382478682 2.33E-08 2.81E-07 Down 1.883866 2.120513 1.930391 0 0.1163549 0 XP_024029931.1 uncharacterized protein LOC112094088 [Morus notabilis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23052_c0_g2_i1 13.5187654 27.03753079 0 0 #NAME? 5.29E-09 6.92E-08 Down 3.360545 2.436184 1.920762 3.03E-18 1.92E-49 0 PIN06349.1 hypothetical protein CDL12_21098 [Handroanthus impetiginosus] Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1 -- -- -- -- -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transferase activity (GO:0016740);|Molecular Function: ubiquitin protein ligase binding (GO:0031625);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN23057_c1_g2_i1 29.65339612 40.99654635 18.31024589 0.446628985 -1.162851213 0.013413989 0.048696513 Down 4.378937 3.299293 4.741777 1.484838 1.020562 1.918614 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23059_c0_g1_i1 686.6912084 447.0482429 926.3341739 2.072112325 1.051102211 9.44E-22 3.45E-20 Up 13.8747 13.44542 13.93205 23.98065 22.84177 22.17746 PIN06340.1 H+/oligopeptide symporter [Handroanthus impetiginosus] Q9FNL7|PTR3_ARATH Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana OX=3702 GN=NPF5.2 PE=2 SV=1 -- -- -- -- -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Biological Process: response to wounding (GO:0009611);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: response to jasmonic acid (GO:0009753);|Molecular Function: peptide:proton symporter activity (GO:0015333);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oligopeptide transmembrane transporter activity (GO:0035673);|Biological Process: hyperosmotic salinity response (GO:0042538);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: tripeptide transmembrane transporter activity (GO:0042937);|Biological Process: dipeptide transport (GO:0042938);|Biological Process: tripeptide transport (GO:0042939);|Biological Process: response to leucine (GO:0043201);|Biological Process: response to histidine (GO:0080052);|Biological Process: response to phenylalanine (GO:0080053);|Molecular Function: peptide transmembrane transporter activity (GO:1904680); PF00854.20 POT family TRINITY_DN2305_c0_g1_i1 15.93447659 31.09737649 0.771576693 0.024811633 -5.332839498 1.39E-08 1.72E-07 Down 4.842239 4.706219 3.935938 0 0 0.3228331 SJX27254.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" O22644|RL23A_FRIAG 60S ribosomal protein L23A OS=Fritillaria agrestis OX=64177 GN=RPL23A PE=2 SV=1 cim:CIMG_06370 K02893 "RP-L23Ae, RPL23A" large subunit ribosomal protein L23Ae ko03010 Ribosome KOG1751 60s ribosomal protein L23 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0089 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Molecular Function: rRNA binding (GO:0019843); "PF03939.12,PF00276.19" "Ribosomal protein L23, N-terminal domain|Ribosomal protein L23" TRINITY_DN23061_c0_g2_i2 18.88992023 37.77984045 0 0 #NAME? 1.91E-12 3.61E-11 Down 2.277044 4.301501 2.985479 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23065_c1_g1_i1 127.040683 254.0813661 0 0 #NAME? 3.50E-78 6.82E-76 Down 7.811559 6.352783 7.347183 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23067_c0_g2_i1 45.0575033 84.91539986 5.199606751 0.061232789 -4.029551797 2.27E-17 6.22E-16 Down 3.263956 3.485343 4.483498 0.08918722 0.2632875 0.227893 XP_026411003.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Papaver somniferum] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); "PF05699.13,PF14372.5" hAT family C-terminal dimerisation region|Domain of unknown function (DUF4413) TRINITY_DN23069_c0_g2_i1 5.089209125 10.17841825 0 0 #NAME? 0.014064571 0.050625096 Down 0 3.919886 2.524221 0 0 0 KZV47401.1 GDSL-like Lipase/Acylhydrolase superfamily protein [Dorcoceras hygrometricum] Q6NLP7|GDL60_ARATH GDSL esterase/lipase At3g62280 OS=Arabidopsis thaliana OX=3702 GN=At3g62280 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YG8Q GDSL esterase lipase "Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);" -- -- TRINITY_DN23093_c0_g4_i1 10.8788223 20.30870365 1.448940942 0.071345811 -3.809027454 0.007402858 0.02959383 Down 4.32517 3.816589 0.6588937 0 0.4663217 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23100_c0_g2_i1 13.26512521 6.539958429 19.99029199 3.056638999 1.611946174 0.035746087 0.10863106 Up 0.3413629 0.8211219 1.459651 1.208499 3.316621 2.017365 PIN16135.1 putative hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [Handroanthus impetiginosus] O23171|MES9_ARATH Methylesterase 9 OS=Arabidopsis thaliana OX=3702 GN=MES9 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111IVV esterase "Biological Process: systemic acquired resistance (GO:0009627);|Biological Process: jasmonic acid metabolic process (GO:0009694);|Biological Process: salicylic acid metabolic process (GO:0009696);|Biological Process: defense response to fungus, incompatible interaction (GO:0009817);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);|Molecular Function: methyl indole-3-acetate esterase activity (GO:0080030);|Molecular Function: methyl salicylate esterase activity (GO:0080031);|Molecular Function: methyl jasmonate esterase activity (GO:0080032);" -- -- TRINITY_DN23102_c0_g1_i8 89.4644341 149.4685686 29.46029961 0.197100299 -2.342998127 1.07E-15 2.59E-14 Down 5.327443 5.901239 6.224603 0.9008744 0.7786267 1.0919 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23103_c1_g1_i1 144.4358959 221.9206986 66.95109314 0.301689268 -1.728864718 1.30E-12 2.50E-11 Down 40.49608 29.60029 36.13622 7.455652 11.21122 7.090566 AJD25171.1 cytochrome P450 CYP72A330 [Salvia miltiorrhiza] H1A988|C7254_GLYUR 11-oxo-beta-amyrin 30-oxidase OS=Glycyrrhiza uralensis OX=74613 GN=CYP72A154 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);|Biological Process: 11-oxo-beta-amyrin catabolic process (GO:1902382);|Biological Process: glycyrrhetinate biosynthetic process (GO:1902386);" -- -- TRINITY_DN23103_c1_g2_i1 74.54307507 123.5653006 25.5208496 0.206537349 -2.275525402 6.49E-06 5.43E-05 Down 16.50551 20.95121 10.69783 1.726582 3.967807 2.385556 XP_012835077.1 PREDICTED: wall-associated receptor kinase-like 14 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23111_c0_g1_i2 114.1996658 68.51063684 159.8886948 2.333779135 1.222668034 6.52E-07 6.44E-06 Up 2.953453 3.477871 3.56301 6.159645 6.070193 6.595429 XP_011089821.1 protein UPSTREAM OF FLC [Sesamum indicum] Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=UFC PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDQZ "function DUF966 domain containing protein, expressed" -- PF06136.12 Domain of unknown function (DUF966) TRINITY_DN23113_c0_g3_i1 15.53340611 31.06681222 0 0 #NAME? 2.04E-10 3.14E-09 Down 2.065704 2.54233 2.96541 6.81E-36 1.64E-25 1.77E-39 XP_016475266.1 PREDICTED: uncharacterized protein LOC107796957 [Nicotiana tabacum] -- -- -- -- -- -- -- -- KOG0987 DNA helicase PIF1/RRM3 [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " L COG0507 exodeoxyribonuclease v alpha -- PF14214.5 Helitron helicase-like domain at N-terminus TRINITY_DN23115_c1_g3_i1 88.00039004 125.2550828 50.74569733 0.405138827 -1.30351174 0.001347045 0.006796312 Down 23.48928 22.59352 19.84719 3.578 13.39621 4.466852 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23116_c0_g3_i2 23.10255551 43.54115091 2.663960102 0.061182584 -4.030735162 1.41E-09 1.97E-08 Down 3.597408 3.160434 4.147965 0.1399077 0 0.4166653 CAN83392.1 hypothetical protein VITISV_041406 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN23127_c0_g1_i1 88.58398035 165.1988647 11.96909595 0.072452653 -3.786817681 5.60E-16 1.40E-14 Down 27.4642 27.39516 17.18342 2.27253 0.3155199 1.681848 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23127_c2_g2_i2 30.7554123 49.63875772 11.87206687 0.239169299 -2.063895887 0.022694091 0.075077603 Down 5.42982 4.199827 12.86742 1.722208 1.311451 1.355111 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23127_c2_g5_i1 32.21677547 44.8652463 19.56830463 0.436157299 -1.197079563 0.032872746 0.101606465 Down 7.296994 13.02478 5.995811 3.538009 3.477663 1.961544 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23127_c2_g6_i4 59.99606007 24.82542158 95.16669855 3.833437359 1.938638605 1.89E-08 2.30E-07 Up 1.618722 2.049247 1.91261 5.439572 5.814623 6.017151 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23134_c0_g2_i1 25.10993244 35.06412777 15.1557371 0.43222912 -1.210131822 0.021463548 0.071692042 Down 3.483952 4.989242 4.10752 1.33265 1.849429 1.114389 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23134_c0_g3_i1 15.04614816 0 30.09229632 Inf Inf 0.000253729 0.001540427 Up 0 0 0 0.6396682 7.30958 5.266219 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23137_c1_g1_i10 201.2728089 317.2176434 85.32797443 0.268988741 -1.894382309 1.39E-22 5.28E-21 Down 9.435458 11.30992 10.05681 1.781122 2.247823 2.678585 XP_019153442.1 PREDICTED: uncharacterized protein LOC109149905 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03004.13 Plant transposase (Ptta/En/Spm family) TRINITY_DN2313_c0_g1_i1 16.27560429 32.55120857 0 0 #NAME? 9.02E-11 1.44E-09 Down 2.166727 2.867765 2.010596 0 0 0 PNY01136.1 "hypothetical protein L195_g024424, partial [Trifolium pratense]" Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN23141_c0_g1_i2 411.5252929 241.9306424 581.1199434 2.4020105 1.264242458 1.75E-20 5.90E-19 Up 9.50678 9.038236 9.874757 17.61866 18.73322 18.75917 EYU32522.1 hypothetical protein MIMGU_mgv1a005924mg [Erythranthe guttata] Q8VXY9|UAH_ARATH Ureidoglycolate hydrolase OS=Arabidopsis thaliana OX=3702 GN=UAH PE=1 SV=1 sind:105171654 K18151 UAH ureidoglycolate amidohydrolase ko00230 Purine metabolism -- -- -- -- -- E COG0624 succinyl-diaminopimelate desuccinylase activity Biological Process: allantoin catabolic process (GO:0000256);|Molecular Function: ureidoglycolate hydrolase activity (GO:0004848);|Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: purine nucleobase catabolic process (GO:0006145);|Biological Process: ureide catabolic process (GO:0010136);|Molecular Function: manganese ion binding (GO:0030145); "PF01546.27,PF04389.16" Peptidase family M20/M25/M40|Peptidase family M28 TRINITY_DN23151_c0_g2_i1 53.84479516 72.50994889 35.17964143 0.485169856 -1.043438179 0.0031225 0.014140758 Down 13.19676 11.37543 10.87025 5.744721 2.154944 6.000969 PKI76677.1 hypothetical protein CRG98_002986 [Punica granatum] Q9M367|BECN1_ARATH Beclin-1-like protein OS=Arabidopsis thaliana OX=3702 GN=ATG6 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XQ85 beclin 1 "Biological Process: autophagosome assembly (GO:0000045);|Cellular Component: phagophore assembly site (GO:0000407);|Cellular Component: cytoskeleton (GO:0005856);|Biological Process: protein targeting to vacuole (GO:0006623);|Biological Process: cellular response to nitrogen starvation (GO:0006995);|Biological Process: pollen germination (GO:0009846);|Cellular Component: extrinsic component of membrane (GO:0019898);|Biological Process: protein localization by the Cvt pathway (GO:0032258);|Cellular Component: phosphatidylinositol 3-kinase complex, class III, type I (GO:0034271);|Cellular Component: phosphatidylinositol 3-kinase complex, class III, type II (GO:0034272);|Biological Process: late endosome to vacuole transport (GO:0045324);|Biological Process: defense response to fungus (GO:0050832);" -- -- TRINITY_DN23159_c0_g1_i1 41.87132071 73.35643314 10.38620829 0.141585514 -2.820254428 0.013683525 0.049508707 Down 22.68701 7.219809 8.250141 0.9733314 2.024663 1.514092 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23162_c0_g1_i6 104.5811536 58.55273784 150.6095694 2.572203708 1.363004903 9.86E-08 1.09E-06 Up 2.182578 3.257658 2.648088 5.029328 5.728591 6.035201 PIN22883.1 putative haloacid-halidohydrolase [Handroanthus impetiginosus] Q84MD8|FHYRK_ARATH Bifunctional riboflavin kinase/FMN phosphatase OS=Arabidopsis thaliana OX=3702 GN=FHY PE=1 SV=1 -- -- -- -- -- -- KOG2914 Predicted haloacid-halidohydrolase and related hydrolases [R] POORLY CHARACTERIZED General function prediction only S COG0637 HAD-superfamily hydrolase subfamily IA variant 3 Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: FMN adenylyltransferase activity (GO:0003919);|Molecular Function: ATP binding (GO:0005524);|Molecular Function: riboflavin kinase activity (GO:0008531);|Biological Process: riboflavin biosynthetic process (GO:0009231);|Biological Process: FMN biosynthetic process (GO:0009398);|Molecular Function: hydrolase activity (GO:0016787); "PF13419.5,PF00702.25,PF13242.5,PF12710.6" Haloacid dehalogenase-like hydrolase|haloacid dehalogenase-like hydrolase|HAD-hyrolase-like|haloacid dehalogenase-like hydrolase TRINITY_DN23176_c0_g1_i1 108.6963085 180.8633918 36.52922533 0.201971361 -2.30777736 6.40E-18 1.84E-16 Down 8.605199 9.096714 8.867533 0.6313338 2.528878 1.149762 XP_011070373.1 uncharacterized protein LOC105156041 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- G COG3836 Aldolase -- PF03328.13 HpcH/HpaI aldolase/citrate lyase family TRINITY_DN23177_c0_g1_i2 544.6883774 739.1840213 350.1927335 0.473755822 -1.077784423 5.03E-19 1.54E-17 Down 40.169 41.24456 40.63149 16.10455 15.3655 15.20753 PIN18860.1 hypothetical protein CDL12_08465 [Handroanthus impetiginosus] Q9ZWR8|ANTA_GENTR Anthocyanin 5-aromatic acyltransferase OS=Gentiana triflora OX=55190 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZBAM Anthocyanin 5-aromatic "Cellular Component: cytoplasm (GO:0005737);|Molecular Function: anthocyanin 5-aromatic acyltransferase activity (GO:0047183);|Molecular Function: caffeoyl-CoA:pelargonidin-3,5-diglucoside 5-O-glucoside-6-O-hydroxycinnamoyltransferase activity (GO:0102777);|Molecular Function: caffeoyl-CoA:delphinidin-3,5-diglucoside 5-O-glucoside-6-O-hydroxycinnamoyltransferase activity (GO:0102815);" PF02458.14 Transferase family TRINITY_DN23185_c0_g1_i4 374.4562237 515.5864835 233.3259639 0.452544765 -1.143867587 8.84E-16 2.17E-14 Down 19.90067 19.41312 18.12252 6.056282 7.115706 7.811617 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23185_c0_g2_i1 73.34100276 146.6820055 0 0 #NAME? 2.13E-33 1.35E-31 Down 12.4937 12.64835 8.234347 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23191_c0_g1_i2 43.30143554 83.28509984 3.31777124 0.039836312 -4.649772092 3.70E-19 1.15E-17 Down 7.879447 7.362342 8.487276 0.1863073 0.3751455 0.2020203 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23191_c0_g3_i1 24.82678512 47.84239406 1.811176178 0.037857139 -4.723290792 1.02E-11 1.80E-10 Down 8.203681 8.035305 11.95696 0 0.9214951 0 EPS66997.1 "hypothetical protein M569_07779, partial [Genlisea aurea]" Q9FM65|FLA1_ARATH Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLA1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- M ENOG4111EHG fasciclin-like arabinogalactan protein Cellular Component: cell wall (GO:0005618);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: anchored component of membrane (GO:0031225);|Cellular Component: anchored component of plasma membrane (GO:0046658);|Cellular Component: apoplast (GO:0048046);|Biological Process: root development (GO:0048364);|Biological Process: shoot system development (GO:0048367); -- -- TRINITY_DN23193_c0_g1_i2 111.5295713 67.33536974 155.7237729 2.312659357 1.20955278 5.69E-07 5.67E-06 Up 5.055575 5.315568 3.76724 9.276326 8.234017 8.883538 XP_011072653.1 serine/threonine-protein kinase RIPK [Sesamum indicum] Q9ZUF4|RIPK_ARATH Serine/threonine-protein kinase RIPK OS=Arabidopsis thaliana OX=3702 GN=RIPK PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN23201_c0_g1_i4 211.0873892 107.2952312 314.8795473 2.934702167 1.553214096 2.62E-17 7.19E-16 Up 5.891968 5.445293 4.992792 12.46046 12.71763 13.47315 XP_011090939.1 protein SRG1 [Sesamum indicum] Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase "Biological Process: leaf senescence (GO:0010150);|Molecular Function: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor (GO:0016682);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213);" "PF14226.5,PF03171.19" non-haem dioxygenase in morphine synthesis N-terminal|2OG-Fe(II) oxygenase superfamily TRINITY_DN23211_c0_g2_i1 5.108370854 10.21674171 0 0 #NAME? 0.011284368 0.042068931 Down 2.687959 2.313982 0.02200862 2.71E-73 3.69E-52 5.87E-63 XP_020549141.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Sesamum indicum] B9FJG3|RSLE1_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); PF14372.5 Domain of unknown function (DUF4413) TRINITY_DN23211_c0_g4_i1 15.2014539 30.40290779 0 0 #NAME? 4.88E-10 7.20E-09 Down 2.124443 2.837662 1.44974 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23212_c0_g1_i2 18.44795407 36.52839896 0.367509184 0.010060917 -6.635094407 4.91E-11 8.09E-10 Down 3.542971 3.847605 4.177045 0.1380585 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23212_c0_g2_i1 21.94056247 43.88112494 0 0 #NAME? 3.03E-14 6.54E-13 Down 6.339606 5.409156 4.00961 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23213_c1_g2_i3 34.67239715 63.11086202 6.233932286 0.098777486 -3.33967394 6.87E-11 1.11E-09 Down 3.20433 4.982573 4.01142 0.05769629 0.7326501 0.1889678 PIN09833.1 hypothetical protein CDL12_17587 [Handroanthus impetiginosus] O24606|EIN3_ARATH Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana OX=3702 GN=EIN3 PE=1 SV=1 sly:543680 K14514 EIN3 ethylene-insensitive protein 3 ko04075 Plant hormone signal transduction -- -- -- -- -- K ENOG4110EBS protein ethylene insensitive "Molecular Function: transcription regulatory region sequence-specific DNA binding (GO:0000976);|Biological Process: response to hypoxia (GO:0001666);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: response to ethylene (GO:0009723);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: sugar mediated signaling pathway (GO:0010182);|Molecular Function: kinase binding (GO:0019900);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: cellular response to iron ion (GO:0071281);" -- -- TRINITY_DN23213_c1_g3_i3 45.25223767 60.82853311 29.67594223 0.487862204 -1.035454377 0.00627187 0.025680947 Down 6.779509 4.762816 7.668264 2.349114 2.81043 2.382997 PIN03787.1 hypothetical protein CDL12_23682 [Handroanthus impetiginosus] Q94A08|RFS2_ARATH Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2 sind:105157308 K06617 E2.4.1.82 raffinose synthase ko00052 Galactose metabolism -- -- -- -- -- S ENOG410YBU9 raffinose synthase "Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: raffinose family oligosaccharide biosynthetic process (GO:0010325);|Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);|Biological Process: raffinose catabolic process (GO:0034484);|Molecular Function: raffinose alpha-galactosidase activity (GO:0052692);|Biological Process: response to karrikin (GO:0080167);" -- -- TRINITY_DN23214_c1_g1_i13 219.1076352 437.0579055 1.15736504 0.002648082 -8.560836652 4.47E-125 1.47E-122 Down 8.736499 9.646997 8.586385 0 0 0.05903065 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23214_c1_g2_i1 38.71391379 76.65625089 0.771576693 0.010065411 -6.634450065 3.45E-22 1.29E-20 Down 9.929481 12.71157 12.25991 0 0 0.3077254 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23217_c2_g1_i3 13.06232129 22.04829986 4.07634272 0.184882406 -2.435320158 0.001981188 0.009549969 Down 3.42715 3.283359 3.349133 0.5114359 0.508062 0.493401 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23217_c2_g4_i1 7.466585168 14.93317034 0 0 #NAME? 2.50E-05 0.000187654 Down 2.298463 2.229319 3.540091 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23227_c1_g1_i5 33.72483072 60.36785987 7.081801579 0.117310794 -3.091592329 1.20E-08 1.50E-07 Down 6.900628 4.813468 3.930434 0.845989 0.1756075 0.4810092 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23227_c1_g3_i1 14.56251568 22.47120972 6.653821642 0.296104292 -1.755822693 0.013582471 0.04922941 Down 1.700663 4.250918 3.005416 0.2988535 1.145078 0.6518188 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23227_c1_g4_i1 12.28102982 24.56205965 0 0 #NAME? 4.78E-08 5.50E-07 Down 2.266342 2.439737 0.9561756 7.43E-26 6.83E-26 6.44E-33 XP_011079853.1 "chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Sesamum indicum]" Q9LYA9|CP41A_ARATH "Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CSP41A PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZXC4 NAD dependent epimerase/dehydratase family "Molecular Function: catalytic activity (GO:0003824);|Cellular Component: ribosome (GO:0005840);|Biological Process: rRNA processing (GO:0006364);|Biological Process: circadian rhythm (GO:0007623);|Molecular Function: poly(U) RNA binding (GO:0008266);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: thylakoid (GO:0009579);|Biological Process: chloroplast organization (GO:0009658);|Biological Process: response to cytokinin (GO:0009735);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: plastoglobule (GO:0010287);|Cellular Component: stromule (GO:0010319);|Molecular Function: rRNA binding (GO:0019843);|Biological Process: plastid translation (GO:0032544);|Biological Process: positive regulation of translation (GO:0045727);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Cellular Component: apoplast (GO:0048046);|Molecular Function: coenzyme binding (GO:0050662);" -- -- TRINITY_DN23229_c0_g1_i10 71.50512469 95.75872031 47.25152907 0.493443615 -1.019042856 0.00099482 0.005198325 Down 3.386733 3.229313 2.824289 1.417102 1.038518 1.314168 XP_011079952.1 F-box/LRR-repeat protein 17-like [Sesamum indicum] Q8W104|FBL17_ARATH F-box/LRR-repeat protein 17 OS=Arabidopsis thaliana OX=3702 GN=FBL17 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YEIX F-box LRR-repeat protein Cellular Component: male germ cell nucleus (GO:0001673);|Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);|Biological Process: pollen development (GO:0009555);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: protein ubiquitination (GO:0016567);|Cellular Component: SCF ubiquitin ligase complex (GO:0019005);|Biological Process: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146);|Biological Process: seed development (GO:0048316);|Biological Process: generative cell mitosis (GO:0055047); "PF00646.32,PF12937.6" F-box domain|F-box-like TRINITY_DN23235_c0_g2_i1 418.4410952 594.8516736 242.0305168 0.406875407 -1.297341014 1.21E-21 4.38E-20 Down 36.001 39.00564 37.74569 10.92294 12.95758 13.2072 XP_020549033.1 remorin-like isoform X2 [Sesamum indicum] P93788|REMO_SOLTU Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YI71 Remorin family Cellular Component: plasma membrane (GO:0005886);|Biological Process: cell-cell signaling (GO:0007267);|Molecular Function: galacturonate binding (GO:0048032); "PF03763.12,PF03766.12" "Remorin, C-terminal region|Remorin, N-terminal region" TRINITY_DN23247_c0_g1_i4 201.2133698 379.2478378 23.17890179 0.061118086 -4.032256837 1.27E-41 1.06E-39 Down 14.81873 13.36516 10.83181 0.4956201 0.5798129 0.8668976 XP_011089116.1 uncharacterized protein LOC105170170 isoform X1 [Sesamum indicum] Q8RWY6|CLASP_ARATH CLIP-associated protein OS=Arabidopsis thaliana OX=3702 GN=CLASP PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG410ZMY0 cytoplasmic linker associated protein Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: spindle microtubule (GO:0005876);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: cell cortex (GO:0005938);|Biological Process: negative regulation of microtubule depolymerization (GO:0007026);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: phragmoplast (GO:0009524);|Biological Process: unidimensional cell growth (GO:0009826);|Biological Process: cortical microtubule organization (GO:0043622);|Biological Process: protein stabilization (GO:0050821);|Molecular Function: microtubule plus-end binding (GO:0051010);|Biological Process: cell division (GO:0051301);|Biological Process: positive regulation of cell division (GO:0051781); -- -- TRINITY_DN23249_c0_g1_i3 170.0439154 97.30592732 242.7819035 2.49503715 1.319061297 1.02E-10 1.62E-09 Up 5.936424 6.530424 7.341068 15.16578 12.31025 12.41924 EYU35442.1 hypothetical protein MIMGU_mgv1a012236mg [Erythranthe guttata] Q9LU85|PAP4_ARATH "Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP4 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG4111HBZ plastid-lipid-associated protein 4 Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: plastoglobule (GO:0010287); PF04755.11 PAP_fibrillin TRINITY_DN23251_c0_g4_i1 5.933964604 9.962540586 1.905388622 0.191255293 -2.386428417 0.044187841 0.128397048 Down 1.505865 0.7300394 1.560326 5.18E-25 0.128053 0.4273468 XP_011091372.1 "beta-amylase 1, chloroplastic [Sesamum indicum]" Q9LIR6|BAM1_ARATH "Beta-amylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1" sind:105171828 K01177 E3.2.1.2 beta-amylase ko00500 Starch and sucrose metabolism -- -- -- -- -- S ENOG410XRH5 beta-amylase Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: starch catabolic process (GO:0005983);|Biological Process: response to water deprivation (GO:0009414);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: beta-amylase activity (GO:0016161);|Molecular Function: amylopectin maltohydrolase activity (GO:0102229); -- -- TRINITY_DN23251_c0_g5_i2 20.40466126 39.71734286 1.091979655 0.027493774 -5.184751225 2.17E-10 3.33E-09 Down 6.897541 4.866479 4.776454 0.1804042 0.1832846 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23259_c1_g1_i4 110.5493646 218.9253177 2.173411413 0.009927639 -6.654333701 2.02E-59 2.80E-57 Down 14.2967 16.56821 12.34836 3.03E-56 0.3568 1.55E-83 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23259_c1_g3_i1 39.62923175 79.25846349 0 0 #NAME? 2.51E-25 1.12E-23 Down 13.79661 16.24138 13.58096 4.36E-86 6.88E-62 3.16E-42 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23262_c0_g1_i2 97.41053021 46.75402097 148.0670395 3.166937012 1.663088173 3.85E-10 5.74E-09 Up 1.821857 1.577257 1.517642 3.734982 4.748852 4.082121 XP_011076933.1 cytochrome c oxidase assembly protein COX15 [Sesamum indicum] Q9FKT8|COX15_ARATH Cytochrome c oxidase assembly protein COX15 OS=Arabidopsis thaliana OX=3702 GN=COX15 PE=2 SV=1 sind:105161063 K02259 COX15 cytochrome c oxidase assembly protein subunit 15 ko00190|ko00860 Oxidative phosphorylation|Porphyrin and chlorophyll metabolism KOG2725 Cytochrome oxidase assembly factor COX15 [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG1612 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group (By similarity) "Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Biological Process: heme a biosynthetic process (GO:0006784);|Biological Process: respiratory chain complex IV assembly (GO:0008535);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627);|Molecular Function: oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor (GO:0016653);|Biological Process: electron transport chain (GO:0022900);|Biological Process: proton transmembrane transport (GO:1902600);" PF02628.14 Cytochrome oxidase assembly protein TRINITY_DN23263_c0_g1_i7 123.3465298 178.1968445 68.49621518 0.384385118 -1.379375612 8.54E-09 1.09E-07 Down 7.296372 6.486532 5.988429 2.097303 1.787503 2.233959 XP_020550982.1 "glucan 1,3-beta-glucosidase A-like isoform X2 [Sesamum indicum]" A1CRV0|EXGA_ASPCL "Probable glucan 1,3-beta-glucosidase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) OX=344612 GN=exgA PE=3 SV=2" -- -- -- -- -- -- -- -- -- -- -- G COG2730 Glycoside hydrolase Family 5 "Biological Process: polysaccharide catabolic process (GO:0000272);|Molecular Function: glucan exo-1,3-beta-glucosidase activity (GO:0004338);|Cellular Component: extracellular region (GO:0005576);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: cell wall organization (GO:0071555);" PF00150.17 Cellulase (glycosyl hydrolase family 5) TRINITY_DN23265_c0_g1_i9 21.95464491 43.90928982 0 0 #NAME? 2.53E-14 5.50E-13 Down 2.960379 2.700375 2.421257 0 0 0 XP_016471099.1 PREDICTED: uncharacterized protein LOC107793286 [Nicotiana tabacum] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF00385.23 Chromo (CHRromatin Organisation MOdifier) domain TRINITY_DN23266_c0_g1_i4 391.0934755 61.27268923 720.9142618 11.76567033 3.556511613 6.28E-110 1.84E-107 Up 2.338607 3.355444 3.116447 28.28031 28.38361 26.81132 XP_011095751.1 zinc transporter 1-like [Sesamum indicum] O81123|ZIP1_ARATH Zinc transporter 1 OS=Arabidopsis thaliana OX=3702 GN=ZIP1 PE=2 SV=1 sind:105175109 K14709 "SLC39A1_2_3, ZIP1_2_3" "solute carrier family 39 (zinc transporter), member 1/2/3" -- -- KOG1558 Fe2+/Zn2+ regulated transporter [P] METABOLISM Inorganic ion transport and metabolism P ENOG4111GP2 zinc transporter Molecular Function: zinc ion transmembrane transporter activity (GO:0005385);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: zinc ion transmembrane transport (GO:0071577); PF02535.21 ZIP Zinc transporter TRINITY_DN23273_c0_g1_i1 12.77582954 5.787198304 19.76446079 3.415203652 1.771971611 0.015418846 0.054620545 Up 0.6498413 0.4685997 0.2461998 1.239681 0.9785632 1.463626 XP_019157594.1 PREDICTED: uncharacterized protein LOC109154211 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z2X5 "CACTA, En Spm sub-class" -- -- -- TRINITY_DN23280_c0_g1_i3 288.7581657 170.4041663 407.112165 2.389097484 1.256465722 2.69E-15 6.36E-14 Up 9.403989 7.984162 9.219391 17.06719 16.42946 17.79645 KZV37246.1 ethylene-responsive transcription factor 5-like [Dorcoceras hygrometricum] Q40478|ERF5_TOBAC Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 PE=2 SV=1 sind:105160656 K09286 EREBP EREBP-like factor -- -- -- -- -- -- -- K ENOG410YIK7 Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: defense response (GO:0006952);|Biological Process: ethylene-activated signaling pathway (GO:0009873); PF00847.19 AP2 domain TRINITY_DN23280_c0_g2_i3 27.99000284 43.60720154 12.37280414 0.283733046 -1.817393903 0.000286135 0.001715563 Down 2.784529 2.47915 3.201967 0.4395868 0.5038146 0.9562559 KZV37246.1 ethylene-responsive transcription factor 5-like [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23283_c0_g2_i1 127.2914621 61.93323035 192.6496938 3.110603027 1.637194291 3.26E-12 6.02E-11 Up 11.06051 9.86104 10.9194 26.51378 27.52158 25.70956 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23292_c0_g3_i1 10.83198647 4.193505758 17.47046718 4.166076832 2.058689446 0.015697857 0.055440195 Up 0.5976364 0.5973521 0.9768443 2.080375 2.791076 2.742011 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23296_c0_g2_i6 107.2390459 208.517097 5.960994864 0.028587559 -5.128468739 1.35E-48 1.41E-46 Down 9.58036 8.462297 7.75772 0.3351335 0.0662485 0.2030331 XP_012855890.1 PREDICTED: potassium channel KAT3 [Erythranthe guttata] P92960|KAT3_ARATH Potassium channel KAT3 OS=Arabidopsis thaliana OX=3702 GN=KAT3 PE=1 SV=1 -- -- -- -- -- -- KOG0498 "K+-channel ERG and related proteins, contain PAS/PAC sensor domain" [PT] METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Signal transduction mechanisms U ENOG410XPSE "Potassium voltage-gated channel, subfamily H (Eag-related), member" Molecular Function: voltage-gated potassium channel activity (GO:0005249);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to nematode (GO:0009624);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: regulation of ion transmembrane transport (GO:0034765);|Biological Process: potassium ion transmembrane transport (GO:0071805); "PF07885.15,PF00520.30" Ion channel|Ion transport protein TRINITY_DN23301_c0_g1_i1 193.5944877 121.1471927 266.0417826 2.196021027 1.134891868 2.61E-09 3.54E-08 Up 4.092619 4.625529 4.897634 7.873103 8.634875 7.667916 XP_011094626.1 UDP-glycosyltransferase 86A1-like [Sesamum indicum] Q9SJL0|U86A1_ARATH UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana OX=3702 GN=UGT86A1 PE=2 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN23312_c0_g2_i2 10.7936463 17.93857051 3.648722099 0.20340094 -2.29760175 0.020642563 0.06956406 Down 1.104411 4.11219 2.379216 0.5865571 0.5856372 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23314_c0_g5_i1 7.752410473 15.50482095 0 0 #NAME? 1.65E-05 0.000128296 Down 2.41016 2.248221 3.740148 3.21E-57 5.81E-60 8.64E-27 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23314_c1_g1_i1 33.4356273 53.13527207 13.73598254 0.258509687 -1.951709753 3.27E-05 0.000240126 Down 9.514797 6.545594 7.475409 2.980199 0.5995338 1.198172 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23319_c0_g1_i1 42.26763683 79.73973442 4.795539242 0.060139895 -4.055533845 2.32E-16 5.92E-15 Down 5.713273 4.079861 5.723314 0.1884344 0.3800605 0.1746305 XP_019153057.1 PREDICTED: nucleolar complex protein 3 homolog [Ipomoea nil] -- -- gmx:100776136 K14834 NOC3 nucleolar complex protein 3 -- -- KOG2153 Protein involved in the nuclear export of pre-ribosomes [JU] INFORMATION STORAGE AND PROCESSING|CELLULAR PROCESSES AND SIGNALING "Translation, ribosomal structure and biogenesis |Intracellular trafficking, secretion, and vesicular transport " JU COG5117 nucleolar complex associated 3 homolog (S. cerevisiae) -- -- -- TRINITY_DN23319_c0_g2_i1 105.7451548 176.2103339 35.27997581 0.200215135 -2.320377057 1.51E-17 4.20E-16 Down 12.49255 13.29936 10.63081 2.142845 1.856437 1.918469 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23326_c1_g1_i1 66.83320282 132.9366612 0.72974442 0.005489414 -7.509132036 3.14E-39 2.46E-37 Down 3.157858 3.027793 4.052668 0.0201695 0.02004439 2.30E-10 PRQ56098.1 putative protein-serine/threonine phosphatase [Rosa chinensis] Q9SK32|MAIL1_ARATH Protein MAIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=MAIL1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YC97 Serine threonine-protein phosphatase 7 long form Cellular Component: nucleus (GO:0005634);|Molecular Function: transaminase activity (GO:0008483);|Biological Process: meristem maintenance (GO:0010073);|Biological Process: regulation of root meristem growth (GO:0010082);|Biological Process: gene silencing (GO:0016458); PF10536.8 Plant mobile domain TRINITY_DN23332_c0_g2_i2 22.17204968 31.35649971 12.98759964 0.414191627 -1.271629705 0.022129644 0.073532751 Down 3.602547 6.089585 5.253276 1.91884 1.462341 1.43496 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23332_c0_g3_i1 16.71888469 24.44812186 8.989647517 0.36770299 -1.443387185 0.045605754 0.131699345 Down 4.431093 5.148349 1.600321 0.8995415 0.8163249 1.570664 XP_011076751.1 probable carboxylesterase 18 [Sesamum indicum] Q9LT10|CXE18_ARATH Probable carboxylesterase 18 OS=Arabidopsis thaliana OX=3702 GN=CXE18 PE=1 SV=1 -- -- -- -- -- -- KOG1515 Arylacetamide deacetylase [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms I COG0657 alpha beta hydrolase fold-3 domain protein Biological Process: pollen tube growth (GO:0009860);|Molecular Function: carboxylic ester hydrolase activity (GO:0052689); -- -- TRINITY_DN23333_c1_g1_i1 16.34941554 31.22879435 1.470036737 0.047073119 -4.408952758 0.000607315 0.003353755 Down 9.934656 5.192755 2.76849 0.6204897 3.31E-54 7.60E-55 KZV57051.1 hypothetical protein F511_20020 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111HPV Stem-specific protein -- -- -- TRINITY_DN23333_c2_g1_i1 5.986018441 11.20046019 0.771576693 0.068887946 -3.859604633 0.014507124 0.051983099 Down 0.8801512 4.05619 1.631413 0 1.80E-29 0.3048311 XP_012853990.1 PREDICTED: stem-specific protein TSJT1-like [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111HPV Stem-specific protein -- -- -- TRINITY_DN23346_c0_g2_i1 52.14532222 95.05652724 9.234117197 0.097143431 -3.363739748 9.23E-16 2.25E-14 Down 4.078375 3.43215 3.339316 0.2432263 0.401674 0.234537 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23352_c0_g1_i3 362.7900937 220.5590158 505.0211715 2.289732613 1.195179135 7.14E-17 1.90E-15 Up 8.23034 9.435944 8.98071 16.44408 16.6648 16.11592 EYU44132.1 hypothetical protein MIMGU_mgv1a020769mg [Erythranthe guttata] Q94A21|SPX4_ARATH SPX domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPX4 PE=2 SV=1 -- -- -- -- -- -- KOG1161 "Protein involved in vacuolar polyphosphate accumulation, contains SPX domain" [P] METABOLISM Inorganic ion transport and metabolism T ENOG410XU76 SPX domain gene Biological Process: cellular response to phosphate starvation (GO:0016036); PF03105.18 SPX domain TRINITY_DN23357_c1_g1_i1 13.59293108 2.852052649 24.33380951 8.532033767 3.092889675 0.000177961 0.001118707 Up 0.1891766 0.110599 1.025663 2.886295 2.322506 4.469096 PIN18317.1 putative alkaloid synthase/Surface mucin Hemomucin [Handroanthus impetiginosus] Q4V3D9|SSL10_ARATH Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=SSL10 PE=2 SV=1 -- -- -- -- -- -- KOG1520 Predicted alkaloid synthase/Surface mucin Hemomucin [R] POORLY CHARACTERIZED General function prediction only G COG3386 SMP-30 gluconolaconase LRE domain protein Cellular Component: vacuole (GO:0005773);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: biosynthetic process (GO:0009058);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020); -- -- TRINITY_DN23369_c0_g1_i4 953.4391596 610.0551593 1296.82316 2.125747385 1.087970163 1.01E-28 5.41E-27 Up 18.09679 17.97496 19.89245 32.17798 32.75036 31.10046 XP_011094470.1 uncharacterized protein LOC105174162 [Sesamum indicum] Q9LTA6|WAV3_ARATH E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana OX=3702 GN=WAV3 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG2304 "von Willebrand factor, type A" Cellular Component: plasma membrane (GO:0005886);|Biological Process: gravitropism (GO:0009630);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: root development (GO:0048364);|Molecular Function: ubiquitin protein ligase activity (GO:0061630); "PF13768.5,PF00092.27,PF13519.5,PF14624.5,PF17123.4,PF05762.13" von Willebrand factor type A domain|von Willebrand factor type A domain|von Willebrand factor type A domain|VWA / Hh protein intein-like|RING-like zinc finger|VWA domain containing CoxE-like protein TRINITY_DN2336_c0_g1_i1 3.340469994 6.680939987 0 0 #NAME? 0.017450027 0.060411171 Down 0.8121117 0.2570499 2.053773 9.97E-61 8.65E-71 1.40E-47 XP_022895165.1 protein NLP5-like [Olea europaea var. sylvestris] Q10S83|NLP1_ORYSJ Protein NLP1 OS=Oryza sativa subsp. japonica OX=39947 GN=NLP1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41129QX RWP-RK domain-containing protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634); -- -- TRINITY_DN23372_c0_g1_i2 64.1927 100.8406776 27.54472241 0.273150906 -1.872229888 0.000401687 0.002325441 Down 13.92227 6.454387 10.11912 2.964573 1.515553 2.338963 PIN18323.1 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Handroanthus impetiginosus] Q94B38|GPT2_ARATH "Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GPT2 PE=2 SV=2" spen:107019904 K15283 SLC35E1 "solute carrier family 35, member E1" -- -- KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [GE] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Amino acid transport and metabolism S ENOG410XP1S solute carrier family 35 member Molecular Function: inorganic phosphate transmembrane transporter activity (GO:0005315);|Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: response to nematode (GO:0009624);|Biological Process: photosynthetic acclimation (GO:0009643);|Biological Process: response to sucrose (GO:0009744);|Biological Process: response to glucose (GO:0009749);|Biological Process: regulation of photosynthesis (GO:0010109);|Molecular Function: phosphoglycerate transmembrane transporter activity (GO:0015120);|Molecular Function: glucose-6-phosphate transmembrane transporter activity (GO:0015152);|Biological Process: phosphoglycerate transmembrane transport (GO:0015713);|Biological Process: phosphoenolpyruvate transport (GO:0015714);|Biological Process: glucose-6-phosphate transport (GO:0015760);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: chloroplast membrane (GO:0031969);|Biological Process: triose phosphate transmembrane transport (GO:0035436);|Molecular Function: triose-phosphate transmembrane transporter activity (GO:0071917);|Biological Process: response to karrikin (GO:0080167); -- -- TRINITY_DN23372_c0_g2_i1 3347.505837 4483.256351 2211.755323 0.493336796 -1.019355199 8.04E-50 8.73E-48 Down 127.2468 125.8546 125.0403 48.22894 52.89099 49.42601 KZV17705.1 "glucose-6-phosphate/phosphate translocator 2, chloroplastic-like [Dorcoceras hygrometricum]" Q94B38|GPT2_ARATH "Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GPT2 PE=2 SV=2" rcu:8284234 K15283 SLC35E1 "solute carrier family 35, member E1" -- -- KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [GE] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Amino acid transport and metabolism S ENOG410XP1S solute carrier family 35 member Molecular Function: inorganic phosphate transmembrane transporter activity (GO:0005315);|Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: response to nematode (GO:0009624);|Biological Process: photosynthetic acclimation (GO:0009643);|Biological Process: response to sucrose (GO:0009744);|Biological Process: response to glucose (GO:0009749);|Biological Process: regulation of photosynthesis (GO:0010109);|Molecular Function: phosphoglycerate transmembrane transporter activity (GO:0015120);|Molecular Function: glucose-6-phosphate transmembrane transporter activity (GO:0015152);|Biological Process: phosphoglycerate transmembrane transport (GO:0015713);|Biological Process: phosphoenolpyruvate transport (GO:0015714);|Biological Process: glucose-6-phosphate transport (GO:0015760);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: chloroplast membrane (GO:0031969);|Biological Process: triose phosphate transmembrane transport (GO:0035436);|Molecular Function: triose-phosphate transmembrane transporter activity (GO:0071917);|Biological Process: response to karrikin (GO:0080167); "PF03151.15,PF00892.19" Triose-phosphate Transporter family|EamA-like transporter family TRINITY_DN23372_c0_g3_i1 54.81162565 92.08458211 17.5386692 0.190462603 -2.39242034 1.42E-10 2.23E-09 Down 10.49617 15.37776 14.07678 2.171315 1.46409 2.448529 XP_015081524.1 "PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic-like [Solanum pennellii]" Q94B38|GPT2_ARATH "Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GPT2 PE=2 SV=2" spen:107025243 K15283 SLC35E1 "solute carrier family 35, member E1" -- -- KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [GE] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Amino acid transport and metabolism S ENOG410XP1S solute carrier family 35 member Molecular Function: inorganic phosphate transmembrane transporter activity (GO:0005315);|Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: response to nematode (GO:0009624);|Biological Process: photosynthetic acclimation (GO:0009643);|Biological Process: response to sucrose (GO:0009744);|Biological Process: response to glucose (GO:0009749);|Biological Process: regulation of photosynthesis (GO:0010109);|Molecular Function: phosphoglycerate transmembrane transporter activity (GO:0015120);|Molecular Function: glucose-6-phosphate transmembrane transporter activity (GO:0015152);|Biological Process: phosphoglycerate transmembrane transport (GO:0015713);|Biological Process: phosphoenolpyruvate transport (GO:0015714);|Biological Process: glucose-6-phosphate transport (GO:0015760);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: chloroplast membrane (GO:0031969);|Biological Process: triose phosphate transmembrane transport (GO:0035436);|Molecular Function: triose-phosphate transmembrane transporter activity (GO:0071917);|Biological Process: response to karrikin (GO:0080167); -- -- TRINITY_DN23375_c0_g1_i1 10.4051963 18.99921642 1.811176178 0.095328993 -3.390941127 0.000414425 0.002393078 Down 2.722082 3.47959 4.35082 0 0.8935328 1.84E-82 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23375_c0_g3_i4 22.06997136 5.662418537 38.47752418 6.795245516 2.764525677 4.57E-06 3.93E-05 Up 0.3290514 0.1916689 0.3994603 2.04745 1.887843 1.374508 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23376_c1_g2_i2 62.62705428 24.05293918 101.2011694 4.207434635 2.072940859 7.79E-10 1.12E-08 Up 0.6289468 0.8043976 0.5726343 2.353782 2.029557 2.428088 XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN23381_c0_g3_i1 22.63460422 31.06413232 14.20507611 0.457282243 -1.128843196 0.03932155 0.11702879 Down 2.515228 3.345436 2.797568 0.9987167 0.7953383 1.427788 XP_022865419.1 heat shock factor protein HSF30-like [Olea europaea var. sylvestris] P41152|HSF30_SOLPE Heat shock factor protein HSF30 OS=Solanum peruvianum OX=4082 GN=HSF30 PE=2 SV=1 spen:107026943 K09419 HSFF "heat shock transcription factor, other eukaryote" -- -- KOG0627 Heat shock transcription factor [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5169 Transcription factor Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Molecular Function: sequence-specific DNA binding (GO:0043565); -- -- TRINITY_DN23382_c0_g5_i1 52.99501014 80.04574607 25.94427422 0.324118089 -1.625408557 0.000133337 0.000861945 Down 10.27868 9.488257 6.297299 3.853887 1.365606 1.657211 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23385_c1_g1_i2 192.5386569 262.6993011 122.3780128 0.465848262 -1.102067985 6.94E-09 8.93E-08 Down 6.907369 6.919298 7.062869 2.718933 2.376072 2.760576 XP_019058005.1 "PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic isoform X1 [Tarenaya hassleriana]" Q9SA18|AKH1_ARATH "Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AKHSDH1 PE=1 SV=1" sind:105174896 K12524 thrA bifunctional aspartokinase / homoserine dehydrogenase 1 ko00260|ko00261|ko00300|ko00270 "Glycine, serine and threonine metabolism|Monobactam biosynthesis|Lysine biosynthesis|Cysteine and methionine metabolism" -- -- -- -- -- E COG0460 homoserine dehydrogenase Molecular Function: aspartate kinase activity (GO:0004072);|Molecular Function: homoserine dehydrogenase activity (GO:0004412);|Molecular Function: ATP binding (GO:0005524);|Biological Process: methionine biosynthetic process (GO:0009086);|Biological Process: threonine biosynthetic process (GO:0009088);|Biological Process: lysine biosynthetic process via diaminopimelate (GO:0009089);|Biological Process: homoserine biosynthetic process (GO:0009090);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Molecular Function: NADP binding (GO:0050661); PF00742.18 Homoserine dehydrogenase TRINITY_DN23387_c0_g2_i1 197.806274 300.5347879 95.07776005 0.316361912 -1.660352177 7.95E-18 2.27E-16 Down 11.63232 11.84237 11.84956 2.881151 3.126401 3.014725 XP_011089416.1 licodione synthase-like [Sesamum indicum] P93149|C93B1_GLYEC Licodione synthase OS=Glycyrrhiza echinata OX=46348 GN=CYP93B1 PE=1 SV=2 sind:105170377 K07408 CYP1A1 cytochrome P450 family 1 subfamily A polypeptide 1 ko00380 Tryptophan metabolism KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN23390_c0_g3_i1 3.86501285 7.7300257 0 0 #NAME? 0.005146082 0.021709673 Down 2.24473 0.3742371 1.812881 0 0 1.96E-40 PIN26534.1 putative UDP-galactose transporter [Handroanthus impetiginosus] B8B350|CSTR1_ORYSI CMP-sialic acid transporter 1 OS=Oryza sativa subsp. indica OX=39946 GN=CSTLP1 PE=3 SV=1 sot:102599534 K15272 SLC35A1_2_3 "solute carrier family 35 (UDP-sugar transporter), member A1/2/3" -- -- -- -- -- -- -- EG COG0697 membrane Cellular Component: Golgi membrane (GO:0000139);|Biological Process: carbohydrate transport (GO:0008643);|Molecular Function: sialic acid transmembrane transporter activity (GO:0015136);|Molecular Function: pyrimidine nucleotide-sugar transmembrane transporter activity (GO:0015165);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN23390_c0_g4_i1 5.048862316 10.09772463 0 0 #NAME? 0.001084902 0.005613316 Down 0.7546363 2.336424 0.8547608 1.73E-42 6.03E-47 4.64E-25 OAY49053.1 hypothetical protein MANES_05G025700 [Manihot esculenta] B8B350|CSTR1_ORYSI CMP-sialic acid transporter 1 OS=Oryza sativa subsp. indica OX=39946 GN=CSTLP1 PE=3 SV=1 rcu:8268646 K15272 SLC35A1_2_3 "solute carrier family 35 (UDP-sugar transporter), member A1/2/3" -- -- KOG2234 Predicted UDP-galactose transporter [G] METABOLISM Carbohydrate transport and metabolism EG COG0697 membrane Cellular Component: Golgi membrane (GO:0000139);|Biological Process: carbohydrate transport (GO:0008643);|Molecular Function: sialic acid transmembrane transporter activity (GO:0015136);|Molecular Function: pyrimidine nucleotide-sugar transmembrane transporter activity (GO:0015165);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN23393_c1_g1_i5 210.9711491 418.9867621 2.955536004 0.007054008 -7.147341057 5.25E-53 6.24E-51 Down 17.70582 22.80674 25.35575 0.08522584 0.1698053 0.09143342 XP_012831213.1 PREDICTED: serine/threonine-protein kinase ATM [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XNPY ataxia telangiectasia mutated -- -- -- TRINITY_DN23393_c2_g1_i1 36.08762459 53.26357232 18.91167686 0.355058364 -1.493871902 0.001525878 0.007591429 Down 8.796668 5.946534 4.369561 1.693716 2.125737 1.730522 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23404_c0_g2_i1 75.01230753 42.09087413 107.9337409 2.56430267 1.358566557 9.72E-05 0.000646086 Up 8.93797 1.749227 6.047571 12.24262 9.916552 12.46687 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23421_c0_g2_i2 56.57036388 76.48738498 36.65334278 0.479207686 -1.061277046 0.002373022 0.011152149 Down 2.41942 3.626954 4.223816 1.686273 1.255494 1.03384 EYU37943.1 hypothetical protein MIMGU_mgv1a004721mg [Erythranthe guttata] Q38967|AAP2_ARATH Amino acid permease 2 OS=Arabidopsis thaliana OX=3702 GN=AAP2 PE=1 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of plasma membrane (GO:0005887);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Molecular Function: symporter activity (GO:0015293);|Biological Process: acidic amino acid transport (GO:0015800);|Biological Process: neutral amino acid transport (GO:0015804); PF01490.17 Transmembrane amino acid transporter protein TRINITY_DN23423_c0_g4_i2 10.08781851 19.45116656 0.724470471 0.037245605 -4.746785984 2.70E-05 0.000201453 Down 3.75177 2.364459 3.13619 0 0.3057589 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23423_c0_g8_i1 15.32483253 30.64966506 0 0 #NAME? 2.66E-10 4.05E-09 Down 3.888186 3.781408 5.485616 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23425_c0_g1_i8 1862.82236 1230.43907 2495.20565 2.027898585 1.019985505 2.33E-38 1.77E-36 Up 41.81418 39.22671 40.82316 67.09537 64.06544 68.28991 XP_011086024.1 "diacylglycerol O-acyltransferase 3, cytosolic [Sesamum indicum]" Q9C5W0|DGAT3_ARATH "Diacylglycerol O-acyltransferase 3, cytosolic OS=Arabidopsis thaliana OX=3702 GN=DGAT3 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410YJKE NA "Molecular Function: diacylglycerol O-acyltransferase activity (GO:0004144);|Cellular Component: cytosol (GO:0005829);|Biological Process: glycerol metabolic process (GO:0006071);|Molecular Function: FMN binding (GO:0010181);|Molecular Function: oxidoreductase activity, acting on NAD(P)H (GO:0016651);|Biological Process: triglyceride biosynthetic process (GO:0019432);|Molecular Function: NAD binding (GO:0051287);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);" -- -- TRINITY_DN23430_c0_g1_i1 119.0029045 22.6029081 215.4029009 9.529875536 3.252457372 5.12E-33 3.20E-31 Up 0.6017302 0.6565585 1.126519 6.663866 6.275725 5.415765 PIN20299.1 Monogalactosyldiacylglycerol synthase [Handroanthus impetiginosus] O82730|MGDG2_ARATH "Monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MGD2 PE=1 SV=1" sind:105162237 K03715 E2.4.1.46 "1,2-diacylglycerol 3-beta-galactosyltransferase" ko00561 Glycerolipid metabolism -- -- -- -- -- M COG0707 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (By similarity) "Biological Process: fatty acid metabolic process (GO:0006631);|Biological Process: glycolipid biosynthetic process (GO:0009247);|Cellular Component: chloroplast outer membrane (GO:0009707);|Biological Process: cellular response to phosphate starvation (GO:0016036);|Biological Process: galactolipid metabolic process (GO:0019374);|Molecular Function: UDP-galactosyltransferase activity (GO:0035250);|Molecular Function: 1,2-diacylglycerol 3-beta-galactosyltransferase activity (GO:0046509);" "PF06925.10,PF04101.15" Monogalactosyldiacylglycerol (MGDG) synthase|Glycosyltransferase family 28 C-terminal domain TRINITY_DN23430_c0_g2_i1 46.20502649 65.4597489 26.95030407 0.411708027 -1.280306518 0.000905104 0.004775706 Down 4.068282 3.172658 3.047757 0.5871409 1.147481 1.688012 KOM32974.1 hypothetical protein LR48_Vigan01g253000 [Vigna angularis] O82730|MGDG2_ARATH "Monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MGD2 PE=1 SV=1" sind:105166432 K03715 E2.4.1.46 "1,2-diacylglycerol 3-beta-galactosyltransferase" ko00561 Glycerolipid metabolism -- -- -- -- -- M COG0707 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (By similarity) "Biological Process: fatty acid metabolic process (GO:0006631);|Biological Process: glycolipid biosynthetic process (GO:0009247);|Cellular Component: chloroplast outer membrane (GO:0009707);|Biological Process: cellular response to phosphate starvation (GO:0016036);|Biological Process: galactolipid metabolic process (GO:0019374);|Molecular Function: UDP-galactosyltransferase activity (GO:0035250);|Molecular Function: 1,2-diacylglycerol 3-beta-galactosyltransferase activity (GO:0046509);" -- -- TRINITY_DN23437_c0_g1_i4 57.17478988 84.13070868 30.21887109 0.359189546 -1.477182731 0.000106827 0.000703595 Down 7.306784 4.163794 5.363337 1.621956 1.262663 1.985662 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF13599.5 Pentapeptide repeats (9 copies) TRINITY_DN23437_c0_g2_i1 39.5554803 55.48704973 23.62391087 0.425755397 -1.231903278 0.002793446 0.012862943 Down 3.709955 4.797522 5.194648 2.15282 1.563659 0.9117605 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23440_c0_g6_i1 13.50785065 22.84514614 4.170555164 0.182557605 -2.453576325 0.001437065 0.00719928 Down 3.242014 2.788218 2.556288 0.4214965 0 0.8509701 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23454_c0_g1_i5 63.21681054 86.92704533 39.50657576 0.45447968 -1.137712302 0.002762563 0.012737536 Down 4.592662 7.605457 4.907957 2.271304 2.60011 1.44289 P42495.1 RecName: Full=Probable cinnamyl alcohol dehydrogenase 1; Short=CAD 1 P42495|CADH1_ARACO Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata OX=29746 GN=CAD1 PE=2 SV=1 tcc:TCM_007141 K00083 E1.1.1.195 cinnamyl-alcohol dehydrogenase ko00940 Phenylpropanoid biosynthesis KOG0023 "Alcohol dehydrogenase, class V" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " C COG1064 alcohol dehydrogenase Molecular Function: zinc ion binding (GO:0008270);|Biological Process: lignin biosynthetic process (GO:0009809);|Molecular Function: cinnamyl-alcohol dehydrogenase activity (GO:0045551);|Molecular Function: sinapyl alcohol dehydrogenase activity (GO:0052747); -- -- TRINITY_DN23459_c0_g1_i1 20.75141849 33.39198381 8.110853166 0.242898212 -2.041576224 0.003115213 0.014112661 Down 1.746161 4.692387 5.042003 0.8817287 0.8583267 0.4039915 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23459_c0_g2_i1 15.60970961 24.802336 6.417083227 0.258728985 -1.950486407 0.026987042 0.086520826 Down 7.243178 5.267209 2.125128 0 1.096884 2.039756 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23462_c0_g1_i1 127.6433479 187.8710644 67.4156314 0.358839886 -1.478587835 2.95E-10 4.45E-09 Down 6.517823 7.019112 7.459234 1.946526 2.36828 1.763051 XP_011073327.1 CBL-interacting serine/threonine-protein kinase 5-like [Sesamum indicum] Q8W1D5|CIPKP_ARATH CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CIPK25 PE=2 SV=1 -- -- -- -- -- -- KOG0583 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Biological Process: signal transduction (GO:0007165);|Biological Process: defense response to fungus (GO:0050832); "PF00069.24,PF07714.16,PF03822.13,PF14531.5" Protein kinase domain|Protein tyrosine kinase|NAF domain|Kinase-like TRINITY_DN23469_c0_g2_i7 73.11818174 98.79484289 47.44152058 0.480202399 -1.058285483 0.003518044 0.015657866 Down 4.409128 4.76256 7.011542 2.96725 1.668433 1.679535 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23474_c0_g2_i2 3.642137979 7.284275959 0 0 #NAME? 0.006806502 0.027581729 Down 0.6442538 0.4347006 1.038378 3.05E-54 2.72E-29 0 XP_012836036.1 PREDICTED: uncharacterized protein LOC105956698 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23474_c0_g4_i3 15.73667223 30.74360005 0.72974442 0.023736466 -5.396751029 2.07E-08 2.51E-07 Down 2.89156 2.637205 1.658758 0.08838772 0.08772108 0 XP_012836036.1 PREDICTED: uncharacterized protein LOC105956698 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23474_c0_g6_i1 10.81236273 21.25721628 0.367509184 0.017288679 -5.854028568 1.80E-06 1.66E-05 Down 1.059913 2.425963 2.329963 0.09330957 3.21E-18 4.30E-63 XP_012836036.1 PREDICTED: uncharacterized protein LOC105956698 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23474_c0_g7_i1 14.78620724 29.57241447 0 0 #NAME? 5.94E-10 8.67E-09 Down 1.449213 1.579438 2.06411 0 0 0 XP_012836036.1 PREDICTED: uncharacterized protein LOC105956698 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23478_c0_g1_i2 11.12649304 19.99309349 2.259892593 0.113033663 -3.145175602 0.000577112 0.003207252 Down 2.309769 2.131194 1.316997 0.2796748 0 0.2950897 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23478_c0_g2_i9 191.8060905 380.9116625 2.700518427 0.007089619 -7.140076257 5.87E-104 1.55E-101 Down 14.13004 12.99969 11.81153 2.33E-75 2.60E-88 0.2107586 XP_011097134.1 protein AAR2 homolog [Sesamum indicum] -- -- sind:105176126 K13205 "AAR2, C20orf4" A1 cistron-splicing factor AAR2 -- -- KOG3937 mRNA splicing factor [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification S ENOG410XSI4 AAR2 splicing factor homolog (S. cerevisiae) -- -- -- TRINITY_DN23479_c2_g1_i1 44.45121675 88.90243349 0 0 #NAME? 4.05E-28 2.08E-26 Down 4.153731 4.338658 2.881292 0 0 0 XP_012855053.1 PREDICTED: probable Xaa-Pro aminopeptidase P [Erythranthe guttata] F4JQH3|AMPP1_ARATH Aminopeptidase P1 OS=Arabidopsis thaliana OX=3702 GN=APP1 PE=1 SV=1 gra:105763294 K01262 pepP Xaa-Pro aminopeptidase -- -- KOG2413 Xaa-Pro aminopeptidase [E] METABOLISM Amino acid transport and metabolism E COG0006 peptidase M24 Molecular Function: aminopeptidase activity (GO:0004177);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: auxin polar transport (GO:0009926);|Molecular Function: N-1-naphthylphthalamic acid binding (GO:0010013);|Molecular Function: manganese ion binding (GO:0030145);|Cellular Component: organelle membrane (GO:0031090);|Molecular Function: metalloaminopeptidase activity (GO:0070006); -- -- TRINITY_DN23479_c5_g1_i1 39.52774784 21.348349 57.70714668 2.703119885 1.434625497 0.000940619 0.004945274 Up 1.827807 2.282019 5.00727 7.766804 6.972888 4.997364 CDP06307.1 unnamed protein product [Coffea canephora] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z1UH transposon protein -- -- -- TRINITY_DN23482_c0_g1_i1 15.43427961 23.23524953 7.63330969 0.32852282 -1.605934509 0.02310698 0.076150367 Down 3.352912 4.572594 2.979847 0.7538962 2.221139 2.06E-75 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23482_c2_g1_i1 26.10824095 47.73325505 4.483226862 0.093922504 -3.412385311 1.21E-05 9.68E-05 Down 3.839848 2.715907 1.592229 0.4098157 0.01045898 0.2044107 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23482_c2_g4_i2 150.3559656 73.88904303 226.8228881 3.069777045 1.618133878 4.14E-05 0.000298144 Up 7.948157 3.46052 14.98163 17.64721 25.87889 22.19558 XP_011073468.1 transmembrane emp24 domain-containing protein p24beta3 [Sesamum indicum] Q9LIL4|P24B3_ARATH Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana OX=3702 GN=At3g22845 PE=2 SV=1 sind:105158412 K20347 "TMED2, EMP24" p24 family protein beta-1 -- -- KOG1692 Putative cargo transport protein EMP24 (p24 protein family) [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U ENOG410XQCK transmembrane emp24 domain trafficking protein 2 Cellular Component: vacuole (GO:0005773);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum-Golgi intermediate compartment (GO:0005793);|Cellular Component: Golgi apparatus (GO:0005794);|Biological Process: intracellular protein transport (GO:0006886);|Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);|Biological Process: Golgi organization (GO:0007030);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: COPII-coated ER to Golgi transport vesicle (GO:0030134);|Cellular Component: Golgi cisterna membrane (GO:0032580); -- -- TRINITY_DN23482_c3_g1_i1 49.73543506 94.59694027 4.87392984 0.051523124 -4.278636132 1.94E-10 3.00E-09 Down 5.555993 6.817805 3.334096 0 0.264955 0.3840097 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23482_c4_g1_i1 9.753940399 16.45813235 3.049748449 0.185303434 -2.432038474 0.008518282 0.033342277 Down 1.9554 1.684567 1.018262 0.1801349 0 0.5514728 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23484_c0_g1_i14 166.5919077 227.4071754 105.77664 0.465142051 -1.104256722 4.31E-08 5.00E-07 Down 5.527341 5.020287 6.51799 2.058885 2.284515 2.062991 PWA85182.1 "alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic [Artemisia annua]" P53535|PHSL2_SOLTU "Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 GN=STP-1 PE=1 SV=1" mdm:103429147 K00688 "E2.4.1.1, glgP, PYG" glycogen phosphorylase ko00500 Starch and sucrose metabolism KOG2099 Glycogen phosphorylase [G] METABOLISM Carbohydrate transport and metabolism G COG0058 "Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity)" Biological Process: carbohydrate metabolic process (GO:0005975);|Molecular Function: glycogen phosphorylase activity (GO:0008184);|Cellular Component: amyloplast (GO:0009501);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: pyridoxal phosphate binding (GO:0030170);|Molecular Function: linear malto-oligosaccharide phosphorylase activity (GO:0102250);|Molecular Function: SHG alpha-glucan phosphorylase activity (GO:0102499); -- -- TRINITY_DN23492_c2_g1_i4 212.9680259 305.8207483 120.1153036 0.392763749 -1.348266317 2.66E-11 4.52E-10 Down 13.89953 15.13881 18.79977 4.952565 4.848145 5.334102 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23494_c0_g2_i1 25.00017264 44.02634521 5.974000077 0.135691483 -2.881597924 6.69E-07 6.59E-06 Down 6.989447 3.839801 5.319737 0.7318019 0.3654476 0.7339945 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23494_c0_g4_i1 34.82115597 63.26424436 6.378067586 0.100816309 -3.310199058 6.85E-11 1.11E-09 Down 4.60069 5.494808 4.506396 0.383708 0.1942671 0.5851907 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23495_c0_g1_i11 261.8695203 157.2140779 366.5249628 2.331374949 1.221181048 1.48E-13 3.06E-12 Up 5.729331 6.166092 6.071541 11.34197 11.89391 10.50584 XP_012853798.1 "PREDICTED: transcription factor UNE10, partial [Erythranthe guttata]" Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis thaliana OX=3702 GN=BHLH72 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- K ENOG4111ACW Helix-loop-helix DNA-binding domain "Molecular Function: double-stranded DNA binding (GO:0003690);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: response to light stimulus (GO:0009416);|Biological Process: red, far-red light phototransduction (GO:0009585);|Biological Process: de-etiolation (GO:0009704);|Cellular Component: nuclear speck (GO:0016607);|Molecular Function: protein dimerization activity (GO:0046983);" PF00010.25 Helix-loop-helix DNA-binding domain TRINITY_DN23518_c0_g1_i1 182.9917624 305.3626316 60.62089312 0.198520994 -2.332636512 4.04E-29 2.20E-27 Down 35.16952 33.2679 31.77346 5.296462 3.53873 7.300399 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23518_c0_g5_i1 23.76702317 38.52611967 9.00792668 0.233813495 -2.096569896 0.003949971 0.017297033 Down 5.558165 10.26065 4.237169 0.9702436 0.9611817 2.025645 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23524_c0_g2_i3 79.29654032 39.75479092 118.8382897 2.989282222 1.57979911 0.004947244 0.021009471 Up 2.517424 2.525263 1.899415 3.930512 4.413929 8.445253 XP_020548935.1 putative late blight resistance protein homolog R1B-14 [Sesamum indicum] Q60CZ8|R1A10_SOLDE Putative late blight resistance protein homolog R1A-10 OS=Solanum demissum OX=50514 GN=R1A-10 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Molecular Function: ADP binding (GO:0043531); -- -- TRINITY_DN23528_c0_g1_i2 112.5593038 157.7611189 67.35748862 0.42695874 -1.227831434 7.54E-07 7.38E-06 Down 3.687868 3.01056 3.12349 1.324464 0.8840555 1.177691 XP_011073195.1 uncharacterized protein LOC105158209 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23529_c0_g2_i2 73.37317171 103.2950437 43.45129973 0.42065232 -1.249299795 0.0002707 0.001632293 Down 3.978529 6.761816 6.322934 2.483232 1.539728 1.799015 XP_011083455.1 SKP1-like protein 1A [Sesamum indicum] Q9FHW7|SKP1B_ARATH SKP1-like protein 1B OS=Arabidopsis thaliana OX=3702 GN=SKP1B PE=1 SV=1 sind:105165986 K03094 "SKP1, CBF3D" S-phase kinase-associated protein 1 ko04141|ko04120 Protein processing in endoplasmic reticulum|Ubiquitin mediated proteolysis KOG1724 "SCF ubiquitin ligase, Skp1 component" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG5201 ubiquitin-dependent protein catabolic process Cellular Component: nucleus (GO:0005634);|Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);|Biological Process: chromosome segregation (GO:0007059);|Biological Process: auxin-activated signaling pathway (GO:0009734);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: viral process (GO:0016032);|Biological Process: protein ubiquitination (GO:0016567); -- -- TRINITY_DN23529_c0_g3_i1 5.369271739 10.73854348 0 0 #NAME? 0.000649949 0.003562317 Down 2.967411 1.454409 1.511443 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23532_c1_g1_i3 459.3662089 671.2446322 247.4877857 0.368699836 -1.439481321 7.54E-28 3.84E-26 Down 36.88889 36.22115 37.01467 11.53128 11.07971 10.16436 PIN04516.1 hypothetical protein CDL12_22945 [Handroanthus impetiginosus] Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YQE9 Zinc finger protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Molecular Function: metal ion binding (GO:0046872);" PF02701.14 "Dof domain, zinc finger" TRINITY_DN23533_c0_g1_i6 200.9273667 133.1271763 268.7275571 2.018577759 1.013339163 3.73E-08 4.37E-07 Up 6.034019 7.248896 6.045717 11.18953 10.36232 9.896286 XP_011087145.1 protein STRICTOSIDINE SYNTHASE-LIKE 5 [Sesamum indicum] Q9CAZ7|SSL5_ARATH Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SSL5 PE=2 SV=1 -- -- -- -- -- -- KOG1520 Predicted alkaloid synthase/Surface mucin Hemomucin [R] POORLY CHARACTERIZED General function prediction only G COG3386 SMP-30 gluconolaconase LRE domain protein Cellular Component: vacuole (GO:0005773);|Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: biosynthetic process (GO:0009058);|Biological Process: response to virus (GO:0009615);|Biological Process: response to fungus (GO:0009620);|Biological Process: response to ethylene (GO:0009723);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: response to jasmonic acid (GO:0009753);|Cellular Component: membrane (GO:0016020); "PF03088.15,PF08450.11" Strictosidine synthase|SMP-30/Gluconolaconase/LRE-like region TRINITY_DN23535_c0_g1_i2 201.8463856 279.1237864 124.5689847 0.446285809 -1.163960164 4.06E-10 6.05E-09 Down 10.33297 9.89375 10.80805 3.168245 3.967969 4.037092 PIN07581.1 Aspartyl protease [Handroanthus impetiginosus] Q940R4|ASP63_ARATH Probable aspartyl protease At4g16563 OS=Arabidopsis thaliana OX=3702 GN=At4g16563 PE=2 SV=1 -- -- -- -- -- -- KOG1339 Aspartyl protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XNV7 aspartic Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Biological Process: proteolysis (GO:0006508);|Cellular Component: plant-type cell wall (GO:0009505);|Biological Process: protein catabolic process (GO:0030163); "PF14541.5,PF14543.5,PF00026.22" Xylanase inhibitor C-terminal|Xylanase inhibitor N-terminal|Eukaryotic aspartyl protease TRINITY_DN23537_c0_g2_i2 64.36301159 89.30749521 39.41852796 0.44137984 -1.179907358 0.000233687 0.00142846 Down 2.814483 2.511507 3.163929 0.6771599 1.203771 1.147993 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23537_c0_g3_i1 15.47487816 6.751632207 24.19812411 3.584040624 1.84158699 0.008293637 0.032592251 Up 0.3586045 0.70256 0.7930956 2.464627 1.148701 1.830763 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23541_c0_g4_i1 63.39701902 35.09469204 91.699346 2.612912115 1.385658601 0.00037498 0.002185601 Up 2.217471 2.611949 1.517446 5.76072 4.480144 3.12326 XP_011092745.1 uncharacterized protein LOC105172855 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YIS3 NA -- -- -- TRINITY_DN23551_c0_g2_i1 9.167675525 3.906901051 14.42845 3.693067679 1.884819702 0.041585122 0.12240134 Up 0 1.066731 0.8566529 1.136556 2.863531 1.726151 XP_021643942.1 ubiquitin receptor RAD23c-like [Hevea brasiliensis] -- -- rcu:8261180 K10839 "RAD23, HR23" UV excision repair protein RAD23 ko04141|ko03420 Protein processing in endoplasmic reticulum|Nucleotide excision repair -- -- -- -- -- O COG5272 ubiquitin -- -- -- TRINITY_DN23553_c0_g1_i1 696.5183051 974.8074145 418.2291957 0.429037766 -1.220823448 1.93E-28 1.02E-26 Down 46.43747 43.81247 44.02609 16.43444 14.21347 15.84903 XP_012836925.1 PREDICTED: scopoletin glucosyltransferase-like [Erythranthe guttata] Q9AT54|SCGT_TOBAC Scopoletin glucosyltransferase OS=Nicotiana tabacum OX=4097 GN=TOGT1 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: identical protein binding (GO:0042802);|Molecular Function: scopoletin glucosyltransferase activity (GO:0050275); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN23553_c0_g2_i1 345.9011468 134.4194988 557.3827948 4.146591825 2.051926041 3.51E-28 1.81E-26 Up 5.748328 6.168149 6.913596 22.68283 22.08166 18.19072 XP_012836925.1 PREDICTED: scopoletin glucosyltransferase-like [Erythranthe guttata] Q9AT54|SCGT_TOBAC Scopoletin glucosyltransferase OS=Nicotiana tabacum OX=4097 GN=TOGT1 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: identical protein binding (GO:0042802);|Molecular Function: scopoletin glucosyltransferase activity (GO:0050275); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN23553_c0_g3_i9 965.234243 580.1368858 1350.3316 2.327608593 1.218848477 1.94E-26 9.13E-25 Up 21.47527 20.3705 25.64674 43.7025 43.90709 39.15419 XP_012836925.1 PREDICTED: scopoletin glucosyltransferase-like [Erythranthe guttata] Q9AT54|SCGT_TOBAC Scopoletin glucosyltransferase OS=Nicotiana tabacum OX=4097 GN=TOGT1 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: identical protein binding (GO:0042802);|Molecular Function: scopoletin glucosyltransferase activity (GO:0050275); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN23553_c0_g4_i1 66.51761546 36.88497767 96.15025324 2.606759156 1.382257295 7.38E-06 6.12E-05 Up 7.420552 10.66759 3.79736 14.2435 13.75374 18.00688 BAG31952.1 UGT73A13 [Perilla frutescens] Q9AT54|SCGT_TOBAC Scopoletin glucosyltransferase OS=Nicotiana tabacum OX=4097 GN=TOGT1 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: identical protein binding (GO:0042802);|Molecular Function: scopoletin glucosyltransferase activity (GO:0050275); -- -- TRINITY_DN23555_c0_g2_i1 137.0485016 191.3052068 82.79179641 0.432773356 -1.208316413 5.83E-08 6.66E-07 Down 3.976154 3.870338 4.597715 1.671882 1.318098 1.347289 XP_019418409.1 PREDICTED: uncharacterized protein LOC109329191 [Lupinus angustifolius] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); "PF00078.26,PF13966.5,PF07727.13" Reverse transcriptase (RNA-dependent DNA polymerase)|zinc-binding in reverse transcriptase|Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN23555_c0_g4_i2 19.75371937 39.13992956 0.367509184 0.009389623 -6.734717045 1.32E-09 1.85E-08 Down 3.322116 1.716044 1.872112 0.0603123 1.41E-44 1.83E-25 GAU10511.1 "hypothetical protein TSUD_420810, partial [Trifolium subterraneum]" P92555|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111K5V Reverse transcriptase (RNA-dependent DNA polymerase) Cellular Component: mitochondrion (GO:0005739); PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN2355_c0_g1_i1 32.68937735 64.29204899 1.086705707 0.016902645 -5.886607132 1.64E-17 4.54E-16 Down 2.965946 4.130982 2.97951 0 0.1424575 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23564_c2_g2_i1 19.75671414 39.51342828 0 0 #NAME? 7.38E-10 1.06E-08 Down 6.545023 3.035212 3.889507 1.76E-41 0 9.96E-51 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2356_c0_g1_i1 213.0858252 423.9275797 2.244070747 0.005293524 -7.561555858 1.25E-117 3.88E-115 Down 36.37915 39.99876 40.58387 0 0.2231331 0.2429729 PIN25970.1 hypothetical protein CDL12_01249 [Handroanthus impetiginosus] P85524|KIRO_ACTDE Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Biological Process: activation of immune response (GO:0002253);|Biological Process: defense response (GO:0006952); "PF00407.18,PF10604.8" Pathogenesis-related protein Bet v I family|Polyketide cyclase / dehydrase and lipid transport TRINITY_DN23570_c0_g1_i1 7.197381948 14.3947639 0 0 #NAME? 4.06E-05 0.000292674 Down 1.714428 0.9206205 1.597254 0 0 0 AGU16584.1 hypothetical protein Salmi_Mp055 (mitochondrion) [Salvia miltiorrhiza] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23570_c0_g2_i4 26.90422984 53.80845968 0 0 #NAME? 1.62E-17 4.50E-16 Down 6.482036 4.950524 6.62765 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23575_c1_g1_i1 32.7704133 51.58831075 13.95251585 0.270458863 -1.886518921 5.80E-05 0.000404184 Down 6.74901 8.109149 6.088455 0.701694 1.052675 2.806329 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23575_c3_g1_i1 62.12396306 105.5494346 18.69849156 0.177153877 -2.496925055 2.96E-12 5.48E-11 Down 22.32838 21.11057 15.61339 2.192531 2.505524 3.860225 XP_013731450.1 probable protein phosphatase 2C 52 [Brassica napus] Q8GY60|P2C52_ARATH Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana OX=3702 GN=At4g03415 PE=2 SV=1 -- -- -- -- -- -- KOG0698 Serine/threonine protein phosphatase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms -- -- -- Molecular Function: phosphoprotein phosphatase activity (GO:0004721);|Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: protein dephosphorylation (GO:0006470);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN23580_c0_g1_i2 335.086223 211.1605238 459.0119221 2.173758209 1.120191476 1.82E-14 4.02E-13 Up 7.759298 8.676102 6.848438 13.11499 13.62135 14.07744 PIM97816.1 N-methyltransferase [Handroanthus impetiginosus] P94026|RBCMT_TOBAC "Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RBCMT PE=2 SV=1" sind:105159997 K00592 E2.1.1.127 [ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase -- -- KOG1337 N-methyltransferase [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZY97 "ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase" Cellular Component: chloroplast (GO:0009507);|Molecular Function: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity (GO:0030785); "PF09273.10,PF00856.27" Rubisco LSMT substrate-binding|SET domain TRINITY_DN23581_c0_g1_i1 5.345645688 1.428347119 9.262944257 6.485079245 2.697124204 0.036403024 0.110118783 Up 0 0.4970598 0.2640979 1.047636 1.435548 1.021068 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23581_c1_g1_i1 6.629392086 13.25878417 0 0 #NAME? 8.60E-05 0.000577847 Down 1.94785 1.415584 2.731416 0 1.91E-76 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23584_c0_g1_i3 154.1180574 247.9745109 60.26160387 0.243015315 -2.040880859 2.18E-11 3.74E-10 Down 10.36453 7.028011 8.198358 1.092501 1.996603 1.919694 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23585_c0_g1_i1 16.72320705 32.69839053 0.748023582 0.022876465 -5.449992062 5.02E-09 6.58E-08 Down 2.964022 2.865763 2.21296 0 0.06659473 0.07736935 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23591_c0_g2_i2 49.48071589 98.96143178 0 0 #NAME? 1.91E-31 1.13E-29 Down 7.979137 9.641267 8.543053 4.28E-50 1.06E-67 1.16E-46 XP_011072002.1 protein-L-isoaspartate O-methyltransferase 1 isoform X1 [Sesamum indicum] Q42539|PIMT1_ARATH Protein-L-isoaspartate O-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=PIMT1 PE=1 SV=3 sind:105157310 K00573 "E2.1.1.77, pcm" protein-L-isoaspartate(D-aspartate) O-methyltransferase -- -- KOG1661 Protein-L-isoaspartate(D-aspartate) O-methyltransferase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG2518 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins (By similarity) Molecular Function: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity (GO:0004719);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: aging (GO:0007568);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: seed germination (GO:0009845);|Biological Process: protein repair (GO:0030091); PF01135.18 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TRINITY_DN23591_c0_g3_i2 2644.656297 1701.462784 3587.849811 2.108685447 1.076343904 8.58E-50 9.27E-48 Up 81.05437 86.08833 89.60451 139.6386 148.4494 148.8583 XP_011072001.1 "28 kDa ribonucleoprotein, chloroplastic-like [Sesamum indicum]" P19683|ROC4_NICSY "31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1" -- -- -- -- -- -- KOG0118 FOG: RRM domain [R] POORLY CHARACTERIZED General function prediction only S ENOG410XSFV telomeric DNA binding Molecular Function: RNA binding (GO:0003723);|Biological Process: mRNA processing (GO:0006397);|Cellular Component: chloroplast (GO:0009507); "PF00076.21,PF16367.4" "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)|RNA recognition motif" TRINITY_DN23592_c0_g4_i1 29.49807653 57.87534635 1.120806715 0.019365875 -5.690339512 1.41E-15 3.39E-14 Down 5.381931 4.718965 3.749314 0.1522128 0 0.08504903 XP_021646781.1 LOB domain-containing protein 38-like [Hevea brasiliensis] Q9SN23|LBD38_ARATH LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG411190X Protein of unknown function DUF260 -- -- -- TRINITY_DN23595_c0_g1_i1 75.77887086 103.8367598 47.72098197 0.459576956 -1.121621634 0.000178896 0.001123797 Down 2.915517 2.294774 2.42655 1.028523 0.7287382 1.083902 XP_011097296.1 chloride channel protein CLC-b-like [Sesamum indicum] P92942|CLCB_ARATH Chloride channel protein CLC-b OS=Arabidopsis thaliana OX=3702 GN=CLC-B PE=1 SV=1 sind:105176254 K05016 CLCN7 chloride channel 7 -- -- KOG0474 Cl- channel CLC-7 and related proteins (CLC superfamily) [P] METABOLISM Inorganic ion transport and metabolism P COG0038 chloride channel Molecular Function: voltage-gated chloride channel activity (GO:0005247);|Molecular Function: nitrate:proton symporter activity (GO:0009671);|Cellular Component: plant-type vacuole membrane (GO:0009705);|Biological Process: response to nitrate (GO:0010167);|Biological Process: nitrate transport (GO:0015706);|Cellular Component: chloride channel complex (GO:0034707);|Biological Process: regulation of ion transmembrane transport (GO:0034765);|Biological Process: chloride transmembrane transport (GO:1902476); "PF00654.19,PF00571.27" Voltage gated chloride channel|CBS domain TRINITY_DN23598_c0_g1_i2 49.79250006 92.24572365 7.339276472 0.079562241 -3.651772282 9.31E-17 2.46E-15 Down 5.822989 6.050226 5.86031 0.5203268 0.5157576 0.09113731 XP_011082247.2 vetispiradiene synthase 3 isoform X2 [Sesamum indicum] G5CV45|TPS32_SOLLC Viridiflorene synthase OS=Solanum lycopersicum OX=4081 GN=TPS32 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBXH synthase "Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Molecular Function: carbon-oxygen lyase activity, acting on phosphates (GO:0016838);|Biological Process: farnesyl diphosphate catabolic process (GO:0045339);|Biological Process: sesquiterpene biosynthetic process (GO:0051762);" PF01397.20 "Terpene synthase, N-terminal domain" TRINITY_DN23601_c0_g2_i1 8.660654885 17.32130977 0 0 #NAME? 0.000350516 0.002059142 Down 1.322444 1.711795 4.430442 3.93E-52 4.29E-41 3.36E-22 PIN10501.1 "putative phosphate acyltransferase, contains PlsC domain [Handroanthus impetiginosus]" Q8GWG0|GPAT9_ARATH Glycerol-3-phosphate acyltransferase 9 OS=Arabidopsis thaliana OX=3702 GN=GPAT9 PE=1 SV=1 sind:105172999 K13506 "GPAT3_4, AGPAT9, AGPAT6" glycerol-3-phosphate O-acyltransferase 3/4 ko00564|ko00561 Glycerophospholipid metabolism|Glycerolipid metabolism KOG2898 "Predicted phosphate acyltransferase, contains PlsC domain" [I] METABOLISM Lipid transport and metabolism I COG0204 Acyltransferase Molecular Function: glycerol-3-phosphate O-acyltransferase activity (GO:0004366);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: glycerol-3-phosphate metabolic process (GO:0006072);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Biological Process: diacylglycerol biosynthetic process (GO:0006651);|Biological Process: phospholipid biosynthetic process (GO:0008654);|Biological Process: pollen maturation (GO:0010152);|Biological Process: seed oilbody biogenesis (GO:0010344);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: triglyceride biosynthetic process (GO:0019432);|Biological Process: lipid storage (GO:0019915);|Molecular Function: protein self-association (GO:0043621);|Biological Process: gametophyte development (GO:0048229);|Molecular Function: sn-1-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity (GO:0102420); -- -- TRINITY_DN23602_c0_g1_i6 1496.243648 978.5628949 2013.924402 2.058042883 1.041273044 1.31E-35 8.94E-34 Up 34.93698 34.03246 33.35971 56.04154 57.39929 56.51262 XP_011089543.1 root phototropism protein 2-like [Sesamum indicum] Q682S0|RPT2_ARATH Root phototropism protein 2 OS=Arabidopsis thaliana OX=3702 GN=RPT2 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YAX9 Root phototropism protein Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: signal transduction (GO:0007165);|Biological Process: phototropism (GO:0009638);|Biological Process: protein ubiquitination (GO:0016567); "PF03000.13,PF00651.30" NPH3 family|BTB/POZ domain TRINITY_DN23604_c0_g2_i3 52.71887 72.13944542 33.29829459 0.461582348 -1.115340043 0.032224979 0.09999921 Down 3.276283 1.601179 4.092352 0.9013702 1.480028 0.9508217 XP_011081111.1 serine-threonine kinase receptor-associated protein-like [Sesamum indicum] Q759L2|EIF3I_ASHGO Eukaryotic translation initiation factor 3 subunit I OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=TIF34 PE=3 SV=1 sind:105164200 K13137 "STRAP, UNRIP" serine-threonine kinase receptor-associated protein ko03013 RNA transport KOG0278 Serine/threonine kinase receptor-associated protein [I] METABOLISM Lipid transport and metabolism S ENOG410XPJ4 serine threonine kinase receptor associated protein "Biological Process: formation of cytoplasmic translation initiation complex (GO:0001732);|Biological Process: translation reinitiation (GO:0002188);|Molecular Function: translation initiation factor activity (GO:0003743);|Cellular Component: cytoplasmic stress granule (GO:0010494);|Cellular Component: eukaryotic 43S preinitiation complex (GO:0016282);|Cellular Component: eukaryotic 48S preinitiation complex (GO:0033290);|Cellular Component: nuclear periphery (GO:0034399);|Cellular Component: multi-eIF complex (GO:0043614);|Biological Process: cellular response to osmotic stress (GO:0071470);|Cellular Component: eukaryotic translation initiation factor 3 complex, eIF3e (GO:0071540);|Cellular Component: eukaryotic translation initiation factor 3 complex, eIF3m (GO:0071541);" -- -- TRINITY_DN23606_c0_g1_i1 6.631073196 0 13.26214639 Inf Inf 0.005017825 0.021263456 Up 0 0 0 1.552117 0.7800135 4.630019 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23609_c0_g1_i2 165.7927608 229.9140514 101.6714703 0.442215122 -1.177179735 8.79E-09 1.12E-07 Down 10.86998 9.187279 10.89292 3.475521 4.039062 3.520973 XP_011084979.1 UDP-glycosyltransferase 76C4-like [Sesamum indicum] Q9C768|U76B1_ARATH UDP-glycosyltransferase 76B1 OS=Arabidopsis thaliana OX=3702 GN=UGT76B1 PE=2 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Biological Process: response to oomycetes (GO:0002239);|Biological Process: defense response (GO:0006952);|Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Biological Process: leaf senescence (GO:0010150);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: glucosyltransferase activity (GO:0046527);|Molecular Function: salicylic acid glucosyltransferase (glucoside-forming) activity (GO:0052640);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN23610_c0_g1_i3 1572.427726 806.4125987 2338.442853 2.899809423 1.535958089 3.19E-75 5.97E-73 Up 22.38985 20.0258 20.49124 48.74554 49.2916 49.16744 XP_011096237.1 "internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial [Sesamum indicum]" Q8GWA1|NDA1_ARATH "Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDA1 PE=2 SV=1" sind:105175488 K17871 ndh1 NADH:ubiquinone reductase (non-electrogenic) -- -- KOG2495 NADH-dehydrogenase (ubiquinone) [C] METABOLISM Energy production and conversion C COG1252 Nadh dehydrogenase Molecular Function: NADH dehydrogenase activity (GO:0003954);|Molecular Function: NADPH dehydrogenase activity (GO:0003959);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial matrix (GO:0005759);|Cellular Component: peroxisome (GO:0005777);|Cellular Component: intrinsic component of mitochondrial inner membrane (GO:0031304);|Biological Process: oxidation-reduction process (GO:0055114);|Biological Process: cellular response to light stimulus (GO:0071482); "PF07992.13,PF00070.26" Pyridine nucleotide-disulphide oxidoreductase|Pyridine nucleotide-disulphide oxidoreductase TRINITY_DN23611_c2_g3_i1 4.46236728 8.92473456 0 0 #NAME? 0.033738913 0.103774934 Down 4.264763 0.5179471 0.8649365 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2361_c0_g1_i1 3.653705037 0.312089676 6.995320399 22.41445628 4.486357599 0.016255347 0.057076034 Up 0 0.2843922 0 1.502717 1.498912 0.5538383 XP_011092949.1 (RS)-norcoclaurine 6-O-methyltransferase-like [Sesamum indicum] Q9T003|ASMT_ARATH Acetylserotonin O-methyltransferase OS=Arabidopsis thaliana OX=3702 GN=ASMT PE=1 SV=1 -- -- -- -- -- -- KOG3178 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS7T o-methyltransferase Cellular Component: cytoplasm (GO:0005737);|Molecular Function: O-methyltransferase activity (GO:0008171);|Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757);|Molecular Function: acetylserotonin O-methyltransferase activity (GO:0017096);|Biological Process: aromatic compound biosynthetic process (GO:0019438);|Biological Process: melatonin biosynthetic process (GO:0030187);|Molecular Function: protein dimerization activity (GO:0046983); PF00891.17 O-methyltransferase TRINITY_DN23622_c0_g1_i2 118.6351814 236.8845744 0.385788347 0.001628592 -9.262158975 8.53E-55 1.06E-52 Down 17.82009 25.24511 21.29204 3.24E-22 2.38E-29 0.09959886 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23622_c0_g2_i1 43.65166123 68.2677154 19.03560706 0.278837617 -1.842502893 0.000162743 0.001031617 Down 7.526926 6.486361 7.938243 0.06908446 0.9348386 3.937216 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23627_c1_g1_i1 106.1777705 185.2022401 27.1533008 0.146614322 -2.769902059 4.93E-23 1.93E-21 Down 24.93791 25.41659 20.98177 2.556787 2.823821 3.071223 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23638_c0_g1_i7 117.4583785 60.8331747 174.0835823 2.861655391 1.516849949 6.28E-10 9.13E-09 Up 2.092667 1.657298 2.27213 4.770963 4.270761 4.927629 PIN15477.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF13947.5,PF07714.16,PF00069.24,PF08488.10" Wall-associated receptor kinase galacturonan-binding|Protein tyrosine kinase|Protein kinase domain|Wall-associated kinase TRINITY_DN23639_c0_g2_i2 792.121343 1153.579238 430.6634479 0.373328016 -1.421484318 5.81E-41 4.81E-39 Down 16.29053 16.02604 15.7352 4.786943 4.979531 4.697619 CAN81099.1 hypothetical protein VITISV_017741 [Vitis vinifera] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF07727.13,PF00665.25,PF13976.5,PF14223.5" Reverse transcriptase (RNA-dependent DNA polymerase)|Integrase core domain|GAG-pre-integrase domain|gag-polypeptide of LTR copia-type TRINITY_DN23639_c1_g1_i10 165.7283046 42.82627654 288.6303327 6.73956169 2.752654768 5.16E-36 3.58E-34 Up 1.856962 1.381723 1.209385 7.078684 8.308221 8.765597 XP_011096175.2 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Sesamum indicum] Q9LPZ9|SD113_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana OX=3702 GN=SD113 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF01453.23,PF00954.19,PF08276.10,PF07714.16,PF00069.24" D-mannose binding lectin|S-locus glycoprotein domain|PAN-like domain|Protein tyrosine kinase|Protein kinase domain TRINITY_DN23640_c0_g1_i4 25.10469804 41.31396101 8.895435073 0.215313053 -2.215492312 0.000164251 0.001039994 Down 1.596382 3.108657 3.699957 0.4404658 0.5864904 0.4381542 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23640_c0_g4_i1 4.279925858 0.738117137 7.82173458 10.59687438 3.40556689 0.036015707 0.109241605 Up 0 0 0.431828 0.8995632 1.391143 1.568018 PIN02055.1 Synaptobrevin/VAMP-like protein [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23643_c0_g1_i2 74.51532537 102.0060308 47.02461992 0.460998429 -1.117166262 0.002130059 0.010165033 Down 9.333977 8.040981 5.364286 1.959267 2.867745 3.642105 XP_012829849.1 PREDICTED: uncharacterized protein LOC105950999 isoform X1 [Erythranthe guttata] -- -- sot:102603152 K09955 K09955 uncharacterized protein -- -- -- -- -- -- -- S COG3533 Secreted protein -- -- -- TRINITY_DN23643_c1_g1_i16 56.90959445 89.33266484 24.48652406 0.274104932 -1.867199806 2.23E-07 2.35E-06 Down 7.208168 9.513023 6.063203 1.221014 2.15365 1.656525 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23648_c1_g1_i1 1619.567117 2474.878405 764.2558286 0.308805405 -1.69523009 3.62E-90 8.25E-88 Down 99.02559 93.68025 98.47484 22.83389 26.14668 23.59125 EYU46312.1 hypothetical protein MIMGU_mgv1a000979mg [Erythranthe guttata] O24370|LOX21_SOLTU "Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LOX2.1 PE=1 SV=1" sind:105163543 K00454 LOX2S lipoxygenase ko00591|ko00592 Linoleic acid metabolism|alpha-Linolenic acid metabolism -- -- -- -- -- S ENOG410YN4N "Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity)" Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: green leaf volatile biosynthetic process (GO:0010597);|Molecular Function: linoleate 13S-lipoxygenase activity (GO:0016165);|Biological Process: oxylipin biosynthetic process (GO:0031408);|Molecular Function: metal ion binding (GO:0046872); "PF00305.18,PF01477.22" Lipoxygenase|PLAT/LH2 domain TRINITY_DN2364_c0_g1_i1 4.490958126 0 8.981916253 Inf Inf 0.001134355 0.005835422 Up 0 0 0 1.410023 0.605576 1.485434 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111VEJ Haemolymph juvenile hormone binding protein (JHBP) -- PF06585.10 Haemolymph juvenile hormone binding protein (JHBP) TRINITY_DN23653_c0_g1_i1 26.56515291 49.27242234 3.857883467 0.078297012 -3.674898929 1.10E-07 1.20E-06 Down 7.906182 8.304787 4.115116 4.12E-25 3.08E-30 1.323075 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23653_c0_g2_i3 44.20618803 80.70840704 7.703969023 0.095454356 -3.389045153 1.04E-09 1.48E-08 Down 6.645361 4.167071 7.763996 0.3215845 0.8588072 0.2511075 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23653_c1_g3_i1 12.33137075 5.461586742 19.20115476 3.515673315 1.813801018 0.02881079 0.091292603 Up 0.9258501 0.6186219 0.3199554 2.908742 1.346184 0.9885597 KVI02411.1 "Zinc finger, DHHC-type, palmitoyltransferase, partial [Cynara cardunculus var. scolymus]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23657_c0_g1_i4 124.5530838 245.8091329 3.297034761 0.013412987 -6.220225611 2.56E-64 3.83E-62 Down 17.05783 13.74366 14.40177 0.3823493 0.09629991 4.52E-45 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2365_c0_g1_i1 13.93347975 24.47852894 3.388430573 0.1384246 -2.852827743 0.001066568 0.005531213 Down 0.9675792 3.23056 2.546579 0.1425192 0.1697188 0.4595543 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23660_c0_g2_i1 17.82048629 30.01620253 5.624770055 0.187391128 -2.415875443 0.002678061 0.012393231 Down 2.329216 1.160861 3.597764 0.3226769 0.1937698 0.5290239 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23660_c0_g3_i1 87.70515064 174.6752829 0.735018369 0.004207913 -7.892679457 1.50E-51 1.70E-49 Down 14.00771 11.32661 14.66444 0.1627296 0 0 XP_012840152.1 PREDICTED: RING-H2 finger protein ATL5-like [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23662_c0_g1_i2 378.9407724 757.4957564 0.385788347 0.000509294 -10.93921253 4.99E-209 3.98E-206 Down 15.10042 13.67616 12.7727 0 0 0.02372393 KZV30725.1 hypothetical protein F511_33597 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111SPB transposon protein -- PF04937.14 Protein of unknown function (DUF 659) TRINITY_DN23662_c0_g2_i1 7.556780816 15.11356163 0 0 #NAME? 0.000256343 0.001555016 Down 1.351748 4.322018 1.630957 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23662_c0_g3_i1 10.44475754 20.88951507 0 0 #NAME? 2.96E-07 3.06E-06 Down 1.815136 1.362003 3.078551 0 3.95E-87 0 KZV30725.1 hypothetical protein F511_33597 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111XVU NA -- -- -- TRINITY_DN23662_c0_g4_i2 20.23369413 40.46738826 0 0 #NAME? 3.37E-09 4.52E-08 Down 1.624185 3.239722 1.594642 0 6.51E-85 0 XP_003624443.2 uncharacterized protein LOC11442416 [Medicago truncatula] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111SPB transposon protein -- -- -- TRINITY_DN23662_c0_g5_i1 10.68943922 21.37887844 0 0 #NAME? 0.001343255 0.006778696 Down 0.9845855 7.571394 3.785602 0 0 0 XP_023912829.1 uncharacterized protein LOC112024425 [Quercus suber] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23665_c0_g1_i1 54.66115843 34.05648313 75.26583373 2.210029539 1.144065653 0.000764239 0.004108373 Up 1.689639 0.8858908 0.9650276 1.718776 2.625435 2.035107 PIN01182.1 MEKK [Handroanthus impetiginosus] Q9ZR08|Y4230_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana OX=3702 GN=At4g03230 PE=3 SV=3 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF01453.23,PF00954.19,PF08276.10,PF07714.16,PF00069.24" D-mannose binding lectin|S-locus glycoprotein domain|PAN-like domain|Protein tyrosine kinase|Protein kinase domain TRINITY_DN23671_c0_g1_i7 1244.457714 220.8207653 2268.094663 10.2712019 3.360533105 6.21E-249 5.52E-246 Up 10.1091 7.694437 7.597948 70.88673 67.22779 72.74572 EYU31854.1 hypothetical protein MIMGU_mgv1a007346mg [Erythranthe guttata] Q9SGA2|GDPD1_ARATH "Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GDPD1 PE=1 SV=1" -- -- -- -- -- -- KOG2421 Predicted starch-binding protein [R] POORLY CHARACTERIZED General function prediction only C COG0584 glycerophosphoryl diester phosphodiesterase Molecular Function: magnesium ion binding (GO:0000287);|Biological Process: glycerol metabolic process (GO:0006071);|Molecular Function: glycerophosphodiester phosphodiesterase activity (GO:0008889);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid (GO:0009536);|Biological Process: cellular phosphate ion homeostasis (GO:0030643);|Biological Process: glycerophospholipid catabolic process (GO:0046475); PF03009.16 Glycerophosphoryl diester phosphodiesterase family TRINITY_DN23673_c0_g2_i1 24.86216934 37.81043954 11.91389915 0.315095495 -1.666138969 0.00213485 0.010181472 Down 4.195464 2.597767 2.620499 0.8513776 0.6816879 0.8555236 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23682_c0_g2_i5 47.32406945 63.43959119 31.20854772 0.491941186 -1.023442251 0.006491975 0.026467596 Down 3.097546 3.368894 3.225652 1.05235 1.442664 1.336748 PIN26193.1 hypothetical protein CDL12_01072 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YY6X NA -- -- -- TRINITY_DN23682_c0_g3_i5 108.9501277 149.8889557 68.01129975 0.45374457 -1.140047717 7.21E-06 5.99E-05 Down 10.76249 11.62249 8.781146 4.387147 3.269465 3.760979 PIN26193.1 hypothetical protein CDL12_01072 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YY6X NA -- -- -- TRINITY_DN23685_c0_g3_i1 54.19301681 35.00779803 73.3782356 2.096054015 1.067675895 0.001610105 0.007956403 Up 1.780702 1.993323 1.041054 2.829392 2.303997 3.037112 XP_011082467.1 caffeoylshikimate esterase-like [Sesamum indicum] Q9C942|CSE_ARATH Caffeoylshikimate esterase OS=Arabidopsis thaliana OX=3702 GN=CSE PE=1 SV=1 -- -- -- -- -- -- KOG1455 Lysophospholipase [I] METABOLISM Lipid transport and metabolism I COG2267 alpha beta hydrolase fold Molecular Function: 2-acylglycerol O-acyltransferase activity (GO:0003846);|Molecular Function: lysophospholipase activity (GO:0004622);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: lignin biosynthetic process (GO:0009809);|Biological Process: response to zinc ion (GO:0010043);|Cellular Component: membrane (GO:0016020);|Molecular Function: hydrolase activity (GO:0016787);|Biological Process: response to hydrogen peroxide (GO:0042542);|Biological Process: response to cadmium ion (GO:0046686);|Molecular Function: caffeoyl-CoA: alcohol caffeoyl transferase activity (GO:0090430); "PF12146.7,PF00561.19,PF12697.6,PF00326.20,PF02230.15" "Serine aminopeptidase, S33|alpha/beta hydrolase fold|Alpha/beta hydrolase family|Prolyl oligopeptidase family|Phospholipase/Carboxylesterase" TRINITY_DN23693_c0_g1_i1 13.9434529 27.88690581 0 0 #NAME? 3.09E-09 4.17E-08 Down 6.115566 4.594152 3.085753 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23695_c0_g1_i4 178.8722488 78.99538207 278.7491156 3.528676085 1.819127004 3.00E-19 9.38E-18 Up 3.131286 3.916131 3.763977 10.5124 9.127229 11.07498 XP_012854342.1 PREDICTED: UDP-glycosyltransferase 83A1-like [Erythranthe guttata] Q9SGA8|U83A1_ARATH UDP-glycosyltransferase 83A1 OS=Arabidopsis thaliana OX=3702 GN=UGT83A1 PE=2 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN23696_c0_g1_i1 39.01488903 21.19932773 56.83045033 2.680766629 1.422645633 0.002782064 0.012815731 Up 3.319973 6.662055 2.602687 8.968812 12.07517 6.147222 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23696_c1_g5_i1 11.58628736 18.3457511 4.826823618 0.26310308 -1.926299958 0.020777863 0.069856974 Down 3.144447 1.98124 1.387886 0 0.7678947 0.5255372 PIN23789.1 hypothetical protein CDL12_03485 [Handroanthus impetiginosus] Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YFD3 "AT hook motif domain containing protein, expressed" Molecular Function: DNA binding (GO:0003677);|Molecular Function: AT DNA binding (GO:0003680);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleoplasm (GO:0005654);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: mitochondrion (GO:0005739);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Cellular Component: chromosomal region (GO:0098687); -- -- TRINITY_DN236_c0_g1_i1 12.33248181 21.64931618 3.01564744 0.139295275 -2.843781778 0.000661319 0.003617647 Down 3.914187 3.393826 3.254665 0 0.4157714 0.8053737 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2371_c0_g1_i1 4.222870326 8.445740652 0 0 #NAME? 0.003182179 0.014367284 Down 1.359158 1.32644 1.230428 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23723_c1_g2_i1 86.57145073 54.01941523 119.1234862 2.205197626 1.140907953 0.00044567 0.002549178 Up 2.084146 2.033666 1.359277 4.076842 3.28921 2.41965 XP_011095036.1 wall-associated receptor kinase 2 [Sesamum indicum] Q9S9M5|WAKLA_ARATH Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana OX=3702 GN=WAKL1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN23742_c0_g1_i2 145.0576059 218.4319961 71.68321565 0.328171774 -1.607476937 5.78E-13 1.14E-11 Down 9.628151 10.28305 9.633721 2.725834 2.555041 2.548539 XP_011082584.2 heat stress transcription factor A-7a-like [Sesamum indicum] Q6VBB2|HFA2B_ORYSJ Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2B PE=2 SV=1 sind:105165310 K09419 HSFF "heat shock transcription factor, other eukaryote" -- -- KOG0627 Heat shock transcription factor [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5169 Transcription factor Molecular Function: RNA polymerase II proximal promoter sequence-specific DNA binding (GO:0000978);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: cellular response to heat (GO:0034605);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription from RNA polymerase II promoter in response to heat stress (GO:0061408); PF00447.16 HSF-type DNA-binding TRINITY_DN23747_c0_g1_i2 634.7790263 895.2804053 374.2776473 0.418056338 -1.258230721 6.36E-28 3.24E-26 Down 40.89822 43.20537 39.76762 14.0494 14.14829 13.5833 XP_012848013.1 PREDICTED: heat stress transcription factor A-7b-like [Erythranthe guttata] Q6VBB2|HFA2B_ORYSJ Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2B PE=2 SV=1 sot:102591828 K09419 HSFF "heat shock transcription factor, other eukaryote" -- -- KOG0627 Heat shock transcription factor [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5169 Transcription factor Molecular Function: RNA polymerase II proximal promoter sequence-specific DNA binding (GO:0000978);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: cellular response to heat (GO:0034605);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription from RNA polymerase II promoter in response to heat stress (GO:0061408); PF00447.16 HSF-type DNA-binding TRINITY_DN23747_c0_g2_i1 18.27795273 29.46355598 7.092349477 0.240716005 -2.054596029 0.001486413 0.00741785 Down 6.637663 4.894759 4.536926 2.135269 0 1.026785 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23749_c2_g2_i1 33.46718057 48.49177786 18.44258328 0.380323925 -1.394699398 0.002775916 0.012795203 Down 4.07407 4.069188 2.859759 1.795075 0.9783806 0.5822552 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23755_c0_g1_i3 84.71287309 119.5860609 49.83968524 0.41676835 -1.262682375 3.17E-05 0.000233773 Down 2.315107 2.014197 2.174879 0.4190711 1.183403 0.5934457 GAU24087.1 hypothetical protein TSUD_388800 [Trifolium subterraneum] P93295|M310_ARATH Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111K5V Reverse transcriptase (RNA-dependent DNA polymerase) Cellular Component: mitochondrion (GO:0005739); PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN23759_c0_g1_i1 141.8937241 81.65791743 202.1295307 2.475320667 1.307615432 2.38E-09 3.25E-08 Up 3.586952 2.276421 2.800653 5.488378 5.916857 5.918317 PIN03686.1 (R)-limonene synthase [Handroanthus impetiginosus] Q2XSC6|LALIM_LAVAN (R)-limonene synthase OS=Lavandula angustifolia OX=39329 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YF98 synthase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: (R)-limonene synthase activity (GO:0034002); "PF03936.15,PF01397.20" "Terpene synthase family, metal binding domain|Terpene synthase, N-terminal domain" TRINITY_DN23763_c0_g4_i1 50.11111637 7.999990911 92.22224182 11.52779332 3.527044471 6.01E-10 8.78E-09 Up 0.5190687 1.494864 1.184632 6.589018 9.799442 12.83413 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23764_c0_g2_i1 6.685021026 13.37004205 0 0 #NAME? 8.88E-05 0.000595529 Down 1.869209 1.544563 1.716036 6.47E-63 0 5.02E-60 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23767_c0_g2_i1 21.1186908 31.34761942 10.88976219 0.347387215 -1.525383438 0.007908479 0.031294404 Down 1.661406 3.59724 2.399888 0.3942148 0.5839168 1.157303 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23783_c0_g1_i2 114.7107395 166.3551278 63.06635126 0.379106747 -1.399323964 1.71E-08 2.10E-07 Down 8.280701 8.382455 7.695895 2.721776 2.447155 2.285119 XP_011085252.1 uncharacterized protein LOC105167296 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG411248W expressed protein -- PF04862.11 Protein of unknown function (DUF642) TRINITY_DN23786_c0_g3_i1 14.11800264 21.53226078 6.703744497 0.311334911 -1.683460734 0.021062498 0.070654004 Down 1.368477 3.165215 1.476351 0.6454642 0.3179146 0.5702303 XP_011081971.1 patatin-like protein 1 [Sesamum indicum] O23181|PLP3_ARATH Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2 -- -- -- -- -- -- KOG0513 Ca2+-independent phospholipase A2 [I] METABOLISM Lipid transport and metabolism S COG3621 Patatin group Molecular Function: phospholipase activity (GO:0004620);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: defense response (GO:0006952);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: acylglycerol lipase activity (GO:0047372); -- -- TRINITY_DN23786_c0_g4_i1 15.14720396 22.82190337 7.472504558 0.327426877 -1.610755342 0.015815102 0.055771823 Down 1.398985 1.98553 3.161634 0.2172479 0.6460372 0.8089948 XP_011081971.1 patatin-like protein 1 [Sesamum indicum] Q6ZJD3|PLP2_ORYSJ Patatin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP2 PE=3 SV=1 -- -- -- -- -- -- KOG0513 Ca2+-independent phospholipase A2 [I] METABOLISM Lipid transport and metabolism S COG3621 Patatin group Molecular Function: phospholipase activity (GO:0004620);|Biological Process: defense response (GO:0006952);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: acylglycerol lipase activity (GO:0047372); PF01734.21 Patatin-like phospholipase TRINITY_DN2378_c0_g1_i1 62.47032247 123.4811561 1.45948884 0.011819527 -6.402683906 7.69E-23 2.97E-21 Down 16.60225 11.99422 10.31343 0.1831708 0.1867916 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23792_c0_g1_i19 26.02906286 50.90076068 1.15736504 0.022737677 -5.45877134 1.06E-13 2.22E-12 Down 4.67519 5.199157 5.09004 9.62E-32 2.10E-31 0.2508048 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23792_c0_g3_i2 66.01347907 95.29168948 36.73526865 0.385503383 -1.375184575 0.000847111 0.004509018 Down 14.23252 17.32326 14.2615 8.929281 1.756038 3.455821 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23792_c0_g4_i1 26.03507661 12.67937437 39.39077885 3.106681585 1.635374382 0.00582213 0.024141596 Up 0.5078255 3.023788 3.562297 8.185081 4.071295 5.498059 XP_022159709.1 probable serine/threonine-protein kinase PBL19 [Momordica charantia] F4JEQ2|PBL23_ARATH Probable serine/threonine-protein kinase PBL23 OS=Arabidopsis thaliana OX=3702 GN=PBL23 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN23796_c0_g2_i1 44.60707542 63.2523161 25.96183475 0.410448761 -1.284725964 0.001053084 0.005470035 Down 13.22506 7.531895 10.88712 3.148108 4.073096 3.292961 XP_011090604.1 cytochrome P450 CYP736A12-like [Sesamum indicum] Q50EK4|C75A1_PINTA Cytochrome P450 750A1 OS=Pinus taeda OX=3352 GN=CYP750A1 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN23798_c0_g1_i1 77.96908793 45.98378077 109.9543951 2.391156039 1.257708279 1.99E-05 0.000152586 Up 1.740731 2.193154 2.223982 4.712428 4.060629 3.159369 XP_011083369.1 protein LYK5 [Sesamum indicum] O22808|LYK5_ARATH Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: chitin binding (GO:0008061);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: protein homodimerization activity (GO:0042803);|Biological Process: innate immune response (GO:0045087);|Biological Process: cellular response to chitin (GO:0071323); "PF07714.16,PF00069.24,PF01476.19" Protein tyrosine kinase|Protein kinase domain|LysM domain TRINITY_DN23804_c1_g1_i4 502.3921255 296.3563628 708.4278881 2.390459517 1.257287974 6.91E-24 2.84E-22 Up 12.8797 12.55309 12.77229 24.11064 26.08024 23.45456 PIN20166.1 hypothetical protein CDL12_07128 [Handroanthus impetiginosus] A7PZL3|PGLR_VITVI Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- M COG5434 Glycoside hydrolase family 28 Molecular Function: polygalacturonase activity (GO:0004650);|Biological Process: carbohydrate metabolic process (GO:0005975);|Cellular Component: integral component of membrane (GO:0016021); "PF00295.16,PF12708.6" Glycosyl hydrolases family 28|Pectate lyase superfamily protein TRINITY_DN23809_c0_g2_i3 134.6766024 193.3228069 76.03039779 0.393282091 -1.346363603 5.79E-09 7.52E-08 Down 21.62798 20.19463 16.8794 6.872695 6.136886 5.582582 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23809_c0_g5_i1 872.7475815 575.6184161 1169.876747 2.032382416 1.023171887 1.74E-24 7.39E-23 Up 49.33598 50.53315 50.28669 86.27324 80.9223 78.86159 XP_011093509.1 "50S ribosomal protein L18, chloroplastic [Sesamum indicum]" Q9SX68|RK18_ARATH "50S ribosomal protein L18, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL18 PE=2 SV=1" sind:105173466 K02881 "RP-L18, MRPL18, rplR" large subunit ribosomal protein L18 ko03010 Ribosome KOG1870 Ubiquitin C-terminal hydrolase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " J COG0256 "This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Molecular Function: 5S rRNA binding (GO:0008097);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: chloroplast envelope (GO:0009941); PF00861.21 "Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast" TRINITY_DN23819_c0_g1_i2 270.4503361 540.1762017 0.724470471 0.001341174 -9.542287478 1.46E-112 4.41E-110 Down 21.13209 25.96465 26.39757 0 0.06741745 0 XP_012857113.1 PREDICTED: wiskott-Aldrich syndrome protein family member 2-like [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23819_c0_g3_i1 28.13714874 56.27429748 0 0 #NAME? 1.78E-13 3.67E-12 Down 7.999857 13.02859 6.733638 9.47E-51 2.83E-67 2.13E-36 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23819_c0_g6_i1 11.52969802 20.79950346 2.259892593 0.108651276 -3.202222976 0.000271454 0.001636187 Down 1.365742 3.232151 3.534693 0.3834667 0 0.4126426 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23819_c0_g7_i1 12.56299294 25.12598588 0 0 #NAME? 2.89E-08 3.44E-07 Down 6.814932 3.114722 3.951905 8.66E-67 1.43E-37 4.58E-58 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23822_c0_g1_i1 145.739288 226.412983 65.06559301 0.287375716 -1.798989941 7.99E-16 1.97E-14 Down 6.274806 6.766314 7.231658 1.408603 1.603984 1.658684 EYU30833.1 hypothetical protein MIMGU_mgv1a017934mg [Erythranthe guttata] Q7X911|SAC6_ARATH Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana OX=3702 GN=SAC6 PE=2 SV=1 -- -- -- -- -- -- KOG1889 Putative phosphoinositide phosphatase [I] METABOLISM Lipid transport and metabolism T COG5329 Phosphatase Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: response to salt stress (GO:0009651);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: phosphatidylinositol-4-phosphate phosphatase activity (GO:0043812);|Biological Process: phosphatidylinositol dephosphorylation (GO:0046856); PF02383.17 SacI homology domain TRINITY_DN23822_c1_g1_i1 35.1133652 21.5380583 48.6886721 2.260587813 1.176697961 0.00701539 0.028301599 Up 3.954144 3.108203 4.271902 8.458088 8.068245 4.204068 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23825_c0_g5_i1 13.45321888 23.90379554 3.002642227 0.125613617 -2.992935224 0.00016737 0.001057697 Down 2.704867 4.187006 5.30511 0.3373358 0.3394556 0.7025328 PIN04553.1 Ribonuclease D [Handroanthus impetiginosus] A9LLI7|RP6L2_ARATH Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1 sind:105173921 K12591 "RRP6, EXOSC10" exosome complex exonuclease RRP6 ko03018 RNA degradation KOG2206 "Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)" [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0349 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides (By similarity) Molecular Function: nucleotide binding (GO:0000166);|Cellular Component: nuclear exosome (RNase complex) (GO:0000176);|Molecular Function: nucleic acid binding (GO:0003676);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: rRNA processing (GO:0006364);|Molecular Function: 3'-5' exonuclease activity (GO:0008408);|Biological Process: polyadenylation-dependent RNA catabolic process (GO:0043633);|Biological Process: RNA-directed DNA methylation (GO:0080188);|Biological Process: positive regulation of histone H3-K27 trimethylation (GO:1902466); -- -- TRINITY_DN23835_c0_g1_i1 597.4947812 356.8017639 838.1877985 2.349169436 1.232150773 1.05E-21 3.82E-20 Up 14.77695 16.16235 14.42748 25.444 28.46072 32.1144 XP_012839442.1 PREDICTED: glycerophosphodiester phosphodiesterase GDPD6-like [Erythranthe guttata] Q9C907|GDPD5_ARATH Glycerophosphodiester phosphodiesterase GDPD5 OS=Arabidopsis thaliana OX=3702 GN=GDPD5 PE=2 SV=1 sind:105157999 K01126 "E3.1.4.46, glpQ, ugpQ" glycerophosphoryl diester phosphodiesterase ko00564 Glycerophospholipid metabolism KOG2258 Glycerophosphoryl diester phosphodiesterase [C] METABOLISM Energy production and conversion C COG0584 glycerophosphoryl diester phosphodiesterase Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: vacuole (GO:0005773);|Biological Process: glycerol metabolic process (GO:0006071);|Biological Process: lipid metabolic process (GO:0006629);|Molecular Function: glycerophosphodiester phosphodiesterase activity (GO:0008889); PF03009.16 Glycerophosphoryl diester phosphodiesterase family TRINITY_DN23835_c0_g2_i1 8.612855521 1.230195228 15.99551581 13.00242063 3.700708326 0.000861287 0.004573751 Up 0 0 0.5168216 2.29304 1.650458 2.021267 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23842_c1_g1_i14 26.89458095 50.0725971 3.7165648 0.074223528 -3.751979618 0.001559322 0.007730703 Down 1.571123 5.5251 2.620098 4.17E-62 0.3452747 0.2388152 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23842_c1_g2_i6 26.5834613 53.16692261 0 0 #NAME? 3.81E-17 1.04E-15 Down 3.27254 4.557862 2.719883 0 0 0 EPS72259.1 "hypothetical protein M569_02499, partial [Genlisea aurea]" Q9SU63|AL2B4_ARATH "Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALDH2B4 PE=1 SV=1" pper:PRUPE_ppa003869mg K00128 E1.2.1.3 aldehyde dehydrogenase (NAD+) ko00561|ko00071|ko00380|ko00310|ko00040|ko00410|ko00340|ko00620|ko00330|ko00903|ko00280|ko00053|ko00010 "Glycerolipid metabolism|Fatty acid degradation|Tryptophan metabolism|Lysine degradation|Pentose and glucuronate interconversions|beta-Alanine metabolism|Histidine metabolism|Pyruvate metabolism|Arginine and proline metabolism|Limonene and pinene degradation|Valine, leucine and isoleucine degradation|Ascorbate and aldarate metabolism|Glycolysis / Gluconeogenesis" KOG2450 Aldehyde dehydrogenase [C] METABOLISM Energy production and conversion C COG1012 Dehydrogenase Molecular Function: aldehyde dehydrogenase (NAD) activity (GO:0004029);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial matrix (GO:0005759);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity (GO:0043878);|Biological Process: response to cadmium ion (GO:0046686); -- -- TRINITY_DN23842_c1_g3_i4 38.83479345 77.30735166 0.362235236 0.004685651 -7.737534918 5.22E-11 8.59E-10 Down 2.998972 3.28572 6.085612 3.06E-12 0.0610832 0.002760212 XP_016705338.1 PREDICTED: 26S protease regulatory subunit 6B homolog [Gossypium hirsutum] Q9SEI4|PRS6B_ARATH 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=1 ppp:PHYPADRAFT_121533 K03063 "PSMC4, RPT3" 26S proteasome regulatory subunit T3 ko03050 Proteasome KOG0727 "26S proteasome regulatory complex, ATPase RPT3" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG1222 26S protease regulatory subunit Cellular Component: proteasome complex (GO:0000502);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cell wall (GO:0005618);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Biological Process: protein catabolic process (GO:0030163);|Molecular Function: proteasome-activating ATPase activity (GO:0036402); -- -- TRINITY_DN23842_c1_g4_i1 6.161459012 12.32291802 0 0 #NAME? 0.000601571 0.003326487 Down 1.507647 3.706984 1.169724 2.50E-93 3.94E-56 1.23E-99 EPS72259.1 "hypothetical protein M569_02499, partial [Genlisea aurea]" Q8S528|AL2B7_ARATH "Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALDH2B7 PE=1 SV=2" pper:PRUPE_ppa003869mg K00128 E1.2.1.3 aldehyde dehydrogenase (NAD+) ko00561|ko00071|ko00380|ko00310|ko00040|ko00410|ko00340|ko00620|ko00330|ko00903|ko00280|ko00053|ko00010 "Glycerolipid metabolism|Fatty acid degradation|Tryptophan metabolism|Lysine degradation|Pentose and glucuronate interconversions|beta-Alanine metabolism|Histidine metabolism|Pyruvate metabolism|Arginine and proline metabolism|Limonene and pinene degradation|Valine, leucine and isoleucine degradation|Ascorbate and aldarate metabolism|Glycolysis / Gluconeogenesis" KOG2450 Aldehyde dehydrogenase [C] METABOLISM Energy production and conversion C COG1012 Dehydrogenase Molecular Function: aldehyde dehydrogenase (NAD) activity (GO:0004029);|Cellular Component: mitochondrial matrix (GO:0005759);|Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity (GO:0043878); -- -- TRINITY_DN23843_c1_g1_i1 40.2314814 59.90618885 20.55677396 0.34314942 -1.543091179 0.000191868 0.001197013 Down 12.46945 11.46722 12.52209 2.304917 3.126757 4.620005 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23845_c0_g1_i4 32.72965451 62.41483452 3.0444745 0.048778059 -4.35762383 6.94E-08 7.83E-07 Down 3.049167 6.523104 3.969304 0.08984169 0.08867003 0.3825047 PIN11303.1 Nuclear distribution protein NUDC [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG2265 Nuclear distribution protein NUDC [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XQVU nudC domain containing -- -- -- TRINITY_DN23848_c0_g1_i1 3.57108665 7.142173299 0 0 #NAME? 0.009357853 0.03607482 Down 2.1068 1.365266 0.357512 0 0 0 XP_012830007.1 PREDICTED: PRA1 family protein B3-like [Erythranthe guttata] -- -- sind:105167006 K20359 "RABAC1, PRAF1" PRA1 family protein 1 -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23851_c0_g1_i3 79.93694285 51.67212198 108.2017637 2.094006586 1.06626598 0.000218953 0.001348565 Up 4.143207 3.861997 3.990559 7.154582 6.098219 6.976594 XP_007136465.1 hypothetical protein PHAVU_009G047500g [Phaseolus vulgaris] Q9M161|DOF41_ARATH Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YN7N zinc finger protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Molecular Function: metal ion binding (GO:0046872); PF02701.14 "Dof domain, zinc finger" TRINITY_DN23856_c0_g2_i2 38.42784054 76.85568107 0 0 #NAME? 2.06E-24 8.70E-23 Down 11.95817 12.54345 8.087369 3.88E-34 0 9.48E-05 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2385_c0_g1_i1 29.1449068 58.2898136 0 0 #NAME? 8.79E-18 2.50E-16 Down 14.07258 14.48714 8.164584 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23880_c0_g4_i5 12.92007101 25.84014203 0 0 #NAME? 1.24E-08 1.55E-07 Down 2.580492 2.545357 1.687774 0 0 0 XP_011072744.1 GATA transcription factor 28 [Sesamum indicum] Q8GXL7|GAT24_ARATH GATA transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=GATA24 PE=1 SV=2 -- -- -- -- -- -- KOG1601 GATA-4/5/6 transcription factors [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5641 Transcription factor Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Molecular Function: zinc ion binding (GO:0008270);|Molecular Function: sequence-specific DNA binding (GO:0043565); -- -- TRINITY_DN23880_c0_g8_i2 14.7682452 29.5364904 0 0 #NAME? 6.54E-10 9.49E-09 Down 2.409027 4.042026 3.72881 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23890_c0_g1_i1 6.346448127 12.69289625 0 0 #NAME? 0.000249952 0.001519698 Down 0.6558664 2.615287 3.193434 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23890_c1_g3_i1 113.0023343 158.8456213 67.15904721 0.422794451 -1.241971654 5.20E-07 5.21E-06 Down 11.45773 14.73262 11.34874 3.145558 4.239636 5.421148 OAE27430.1 hypothetical protein AXG93_3911s1120 [Marchantia polymorpha subsp. ruderalis] A9TF79|SRK2A_PHYPA Serine/threonine-protein kinase SRK2A OS=Physcomitrella patens subsp. patens OX=3218 GN=SRK2A PE=1 SV=1 bna:106361852 K14498 SNRK2 serine/threonine-protein kinase SRK2 ko04075 Plant hormone signal transduction KOG0583 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: intracellular signal transduction (GO:0035556); -- -- TRINITY_DN23893_c0_g1_i6 159.2945136 266.7681495 51.8208778 0.194254366 -2.363981069 3.84E-26 1.78E-24 Down 15.45521 16.24985 13.89512 2.575946 1.835773 2.774575 XP_024981950.1 membrane-anchored ubiquitin-fold protein 3-like isoform X2 [Cynara cardunculus var. scolymus] Q6Z8K4|MUB3_ORYSJ Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG4111627 membrane-anchored ubiquitin-fold protein 3-like Cellular Component: plasma membrane (GO:0005886); -- -- TRINITY_DN23894_c0_g1_i2 68.65536794 120.969166 16.34156989 0.135088721 -2.888020873 1.23E-16 3.22E-15 Down 4.413408 5.315673 4.747815 0.1777752 0.7880451 0.5938694 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23894_c0_g2_i1 3.258996974 6.517993947 0 0 #NAME? 0.014530779 0.052047316 Down 1.623354 0.7888982 0.3484337 0 0 1.02E-90 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23897_c0_g1_i1 29.77295274 42.33488185 17.21102364 0.406544743 -1.298513957 0.030833556 0.096366539 Down 4.052426 5.414932 5.135621 0.3651657 3.618113 0.7395777 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23897_c1_g2_i1 20.30080788 35.58636725 5.015248507 0.140931736 -2.826931572 7.87E-06 6.50E-05 Down 6.719761 4.710981 6.204229 0 0 1.97799 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23898_c0_g3_i1 80.58602422 109.3177883 51.85426017 0.474344212 -1.07599375 0.008805895 0.034273 Down 5.785955 4.134885 3.06174 1.226766 1.65755 2.104742 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23899_c0_g3_i1 5.874526557 10.20589973 1.543153387 0.151202092 -2.725449997 0.029609132 0.093220096 Down 2.950039 2.266866 1.360377 0 0 0.7042591 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23901_c0_g1_i1 181.0557684 258.5671696 103.5443672 0.400454425 -1.320290034 2.27E-11 3.89E-10 Down 11.76796 13.31992 12.4763 3.764316 3.758767 4.646386 XP_011088744.1 trihelix transcription factor ASIL2 [Sesamum indicum] Q9LJG8|ASIL2_ARATH Trihelix transcription factor ASIL2 OS=Arabidopsis thaliana OX=3702 GN=ASIL2 PE=1 SV=1 -- -- -- -- -- -- KOG4282 "Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain" [K] INFORMATION STORAGE AND PROCESSING Transcription K ENOG410YYXY Transcription factor "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: seed maturation (GO:0010431);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);" PF13837.5 Myb/SANT-like DNA-binding domain TRINITY_DN23902_c2_g1_i1 17.66342994 7.015834728 28.31102515 4.035303887 2.012677323 0.001669923 0.008221564 Up 0.374727 1.08979 0.5739268 2.787187 1.578814 2.434945 PWA42467.1 "ankyrin repeat-containing domain, PGG domain protein [Artemisia annua]" -- -- -- -- -- -- -- -- KOG0504 FOG: Ankyrin repeat [R] POORLY CHARACTERIZED General function prediction only S COG0666 Ankyrin Repeat -- -- -- TRINITY_DN23910_c0_g2_i2 360.8858486 236.0994803 485.6722169 2.057066014 1.040588092 2.43E-13 4.95E-12 Up 6.929426 7.220393 6.598527 11.11681 11.58509 11.74864 XP_011073009.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 [Sesamum indicum] F4JF21|PTA10_ARATH Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 OS=Arabidopsis thaliana OX=3702 GN=PTAC10 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XTWN NA Molecular Function: nucleic acid binding (GO:0003676);|Cellular Component: cytosol (GO:0005829);|Cellular Component: nucleoid (GO:0009295);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid chromosome (GO:0009508);|Cellular Component: chloroplast stroma (GO:0009570); -- -- TRINITY_DN23914_c0_g2_i2 37.58846639 52.88455661 22.29237617 0.421529036 -1.246296084 0.003697934 0.016367034 Down 1.673176 2.044472 1.592986 0.6101449 0.5825376 0.6050954 XP_020550214.1 LOW QUALITY PROTEIN: uncharacterized protein LOC110012128 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YQ1A NA -- -- -- TRINITY_DN23922_c0_g2_i5 37.93605155 51.28117801 24.59092509 0.479531205 -1.060303395 0.026679792 0.085673159 Down 6.988522 4.891336 9.633492 1.067511 3.615054 3.573731 KRH47986.1 hypothetical protein GLYMA_07G060700 [Glycine max] O04616|CUT1A_ARATH "Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG4111YWG NA Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: thylakoid (GO:0009579);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: plastoglobule (GO:0010287);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN23937_c1_g3_i1 31.5966693 45.96577448 17.22756412 0.374791121 -1.415841321 0.037488065 0.112630666 Down 6.3586 4.506927 2.560841 2.149204 1.648243 0.2429833 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23937_c2_g1_i1 25.73852968 37.75971529 13.71734406 0.363279859 -1.460846712 0.004147561 0.018064696 Down 1.95398 2.76995 3.640925 0.9829054 0.75478 0.6909286 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23940_c1_g3_i1 50.46123235 68.00307517 32.91938952 0.484086777 -1.046662406 0.003040379 0.01382608 Down 6.749849 7.189379 9.407483 2.812366 2.229019 4.113358 XP_012857835.1 PREDICTED: uncharacterized protein LOC105977107 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111URZ "Protein of unknown function, DUF538" -- PF04398.11 "Protein of unknown function, DUF538" TRINITY_DN23941_c2_g3_i1 406.6343114 548.1746846 265.0939382 0.483593908 -1.048132023 1.34E-14 2.99E-13 Down 28.65656 24.03959 27.96686 10.48975 10.78504 10.24954 PIN26255.1 Hydroxyindole-O-methyltransferase [Handroanthus impetiginosus] Q6VMW0|Q8OMT_MENPI 8-hydroxyquercetin 8-O-methyltransferase OS=Mentha piperita OX=34256 GN=OMT2 PE=1 SV=1 -- -- -- -- -- -- KOG3178 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS7T o-methyltransferase Molecular Function: O-methyltransferase activity (GO:0008171);|Biological Process: flavonoid metabolic process (GO:0009812);|Molecular Function: 8-hydroxyquercitin 8-O-methyltransferase activity (GO:0030761);|Biological Process: methylation (GO:0032259);|Molecular Function: protein dimerization activity (GO:0046983); "PF00891.17,PF08100.10" O-methyltransferase|Dimerisation domain TRINITY_DN23941_c2_g7_i3 24.55190249 14.97837759 34.1254274 2.278312668 1.187965751 0.02424656 0.079204384 Up 1.669428 1.599798 1.812074 3.975107 2.612532 2.69517 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23943_c0_g1_i3 63.02445619 90.90006666 35.14884572 0.386675687 -1.37080404 3.67E-05 0.000267213 Down 2.34727 1.86341 2.107139 0.5753258 0.8451726 0.5527797 XP_012829221.1 PREDICTED: putative disease resistance protein At1g58400 [Erythranthe guttata] Q6L403|R1B17_SOLDE Putative late blight resistance protein homolog R1B-17 OS=Solanum demissum OX=50514 GN=R1B-17 PE=3 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Biological Process: metal ion transport (GO:0030001);|Molecular Function: ADP binding (GO:0043531);|Molecular Function: metal ion binding (GO:0046872); PF00931.21 NB-ARC domain TRINITY_DN23945_c0_g1_i3 29.19547386 58.39094772 0 0 #NAME? 7.00E-19 2.13E-17 Down 3.366537 2.841953 3.05689 0 0 0 PRQ15618.1 putative NADH:ubiquinone reductase (H(+)-translocating) (mitochondrion) [Rosa chinensis] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN23945_c0_g2_i3 108.9734009 217.9468018 0 0 #NAME? 1.65E-67 2.66E-65 Down 3.696883 4.348488 4.084006 0 0 0 XP_019194754.1 PREDICTED: uncharacterized protein LOC109188565 [Ipomoea nil] P93295|M310_ARATH Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111Y55 Reverse transcriptase (RNA-dependent DNA polymerase) Cellular Component: mitochondrion (GO:0005739); "PF13456.5,PF00078.26" Reverse transcriptase-like|Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN23949_c0_g1_i4 961.841676 1535.985929 387.6974229 0.252409489 -1.986161949 1.80E-85 3.93E-83 Down 71.64921 66.71642 69.19958 13.55262 14.72575 13.99935 ARO92271.1 flavanone 3-hydroxylase [Camptotheca acuminata] Q7XZQ7|FL3H_PETCR Flavanone 3-dioxygenase OS=Petroselinum crispum OX=4043 GN=FHT PE=1 SV=1 rcu:8268714 K00475 E1.14.11.9 naringenin 3-dioxygenase ko00941 Flavonoid biosynthesis KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: flavonoid biosynthetic process (GO:0009813);|Molecular Function: L-ascorbic acid binding (GO:0031418);|Molecular Function: naringenin 3-dioxygenase activity (GO:0045486);|Molecular Function: metal ion binding (GO:0046872); "PF14226.5,PF03171.19" non-haem dioxygenase in morphine synthesis N-terminal|2OG-Fe(II) oxygenase superfamily TRINITY_DN23950_c1_g1_i4 204.7363949 408.7430453 0.72974442 0.001785338 -9.129587194 5.54E-119 1.73E-116 Down 20.0876 20.49775 20.6299 0.06069756 0.05975429 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23950_c1_g5_i1 39.54792624 20.9424467 58.15340578 2.776820045 1.473433685 0.00034963 0.002055011 Up 1.44991 3.154367 1.970917 6.34343 4.484402 3.922865 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23950_c2_g1_i17 66.51750185 123.323343 9.711660672 0.078749574 -3.666584079 4.40E-22 1.63E-20 Down 3.608846 5.282458 4.061559 0.3272117 0.1440868 0.3411582 PIN23796.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Handroanthus impetiginosus] F4J9Q6|FKB43_ARATH Peptidyl-prolyl cis-trans isomerase FKBP43 OS=Arabidopsis thaliana OX=3702 GN=FKBP43 PE=2 SV=1 sind:105171353 K14826 FPR3_4 FK506-binding nuclear protein -- -- KOG0552 FKBP-type peptidyl-prolyl cis-trans isomerase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0545 Peptidyl-prolyl cis-trans isomerase Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755); -- -- TRINITY_DN23951_c0_g1_i1 9.455839781 16.33911527 2.57256429 0.1574482 -2.66705083 0.005057944 0.021397507 Down 1.595831 3.613181 2.982724 0.9967866 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23953_c1_g1_i11 137.9766685 186.4890805 89.46425653 0.479729195 -1.059707853 1.58E-06 1.47E-05 Down 8.982827 8.075396 10.03855 4.194435 3.087161 3.201538 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- ADL COG5049 5'-3' exoribonuclease -- -- -- TRINITY_DN23953_c1_g5_i1 13.73044116 20.35307032 7.107812006 0.349225542 -1.517769016 0.038549181 0.115180369 Down 4.251571 3.459694 2.985732 1.00981 0.6598788 1.292099 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23954_c0_g1_i1 2074.043108 1329.022292 2819.063923 2.121156236 1.084850888 1.33E-45 1.26E-43 Up 66.99756 67.6406 66.84575 111.8072 117.465 115.629 AJD25214.1 cytochrome P450 CYP92A73 [Salvia miltiorrhiza] Q9SD85|F3PH_ARATH Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana OX=3702 GN=CYP75B1 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: response to auxin (GO:0009733);|Biological Process: flavonoid biosynthetic process (GO:0009813);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN23957_c0_g1_i1 152.8316023 211.5540254 94.10917922 0.444847027 -1.168618784 4.11E-08 4.79E-07 Down 10.02889 11.15452 10.36834 4.039587 3.347192 3.939845 XP_011094977.1 laccase-4 [Sesamum indicum] O80434|LAC4_ARATH Laccase-4 OS=Arabidopsis thaliana OX=3702 GN=IRX12 PE=2 SV=2 sind:105174540 K05909 E1.10.3.2 laccase -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase "Molecular Function: copper ion binding (GO:0005507);|Biological Process: lignin biosynthetic process (GO:0009809);|Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: oxidoreductase activity, oxidizing metal ions (GO:0016722);|Biological Process: lignin catabolic process (GO:0046274);|Cellular Component: apoplast (GO:0048046);|Molecular Function: hydroquinone:oxygen oxidoreductase activity (GO:0052716);" "PF07731.13,PF00394.21" Multicopper oxidase|Multicopper oxidase TRINITY_DN23974_c0_g1_i2 109.2547364 200.671137 17.83833568 0.08889338 -3.491780202 1.39E-32 8.50E-31 Down 28.53631 30.42194 25.25426 2.841212 1.294793 1.918378 XP_022893068.1 probable UDP-arabinopyranose mutase 5 isoform X2 [Olea europaea var. sylvestris] Q9FFD2|RGP5_ARATH Probable UDP-arabinopyranose mutase 5 OS=Arabidopsis thaliana OX=3702 GN=RGP5 PE=1 SV=1 sind:105166899 K13379 "RGP, UTM" reversibly glycosylated polypeptide / UDP-arabinopyranose mutase ko00520 Amino sugar and nucleotide sugar metabolism -- -- -- -- -- S ENOG410YC4P UDP-arabinopyranose mutase Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to salt stress (GO:0009651);|Biological Process: plant-type cell wall biogenesis (GO:0009832);|Biological Process: UDP-L-arabinose metabolic process (GO:0033356);|Molecular Function: UDP-arabinopyranose mutase activity (GO:0052691);|Biological Process: cell wall organization (GO:0071555); -- -- TRINITY_DN23980_c0_g1_i1 9.802055599 19.6041112 0 0 #NAME? 9.24E-07 8.92E-06 Down 2.323476 1.676434 2.297781 5.37E-52 4.03E-63 2.78E-56 PKI61667.1 hypothetical protein CRG98_017891 [Punica granatum] Q9SIB2|KCS12_ARATH 3-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana OX=3702 GN=KCS12 PE=2 SV=1 sind:105170368 K15397 KCS 3-ketoacyl-CoA synthase ko00062 Fatty acid elongation -- -- -- -- -- Q ENOG410Y9JS 3-ketoacyl-coa synthase Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Cellular Component: membrane (GO:0016020);|Molecular Function: 3-oxo-arachidoyl-CoA synthase activity (GO:0102336);|Molecular Function: 3-oxo-cerotoyl-CoA synthase activity (GO:0102337);|Molecular Function: 3-oxo-lignoceronyl-CoA synthase activity (GO:0102338);|Molecular Function: very-long-chain 3-ketoacyl-CoA synthase activity (GO:0102756); "PF08392.11,PF08541.9,PF02797.14" "FAE1/Type III polyketide synthase-like protein|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal|Chalcone and stilbene synthases, C-terminal domain" TRINITY_DN23980_c0_g3_i2 16.62804077 33.25608154 0 0 #NAME? 4.76E-11 7.87E-10 Down 2.268247 3.891277 3.077341 0 0 0 XP_011069412.1 "3-ketoacyl-CoA synthase 12-like, partial [Sesamum indicum]" Q9SIB2|KCS12_ARATH 3-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana OX=3702 GN=KCS12 PE=2 SV=1 sind:105155237 K15397 KCS 3-ketoacyl-CoA synthase ko00062 Fatty acid elongation -- -- -- -- -- Q ENOG410Y9JS 3-ketoacyl-coa synthase Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Cellular Component: membrane (GO:0016020);|Molecular Function: 3-oxo-arachidoyl-CoA synthase activity (GO:0102336);|Molecular Function: 3-oxo-cerotoyl-CoA synthase activity (GO:0102337);|Molecular Function: 3-oxo-lignoceronyl-CoA synthase activity (GO:0102338);|Molecular Function: very-long-chain 3-ketoacyl-CoA synthase activity (GO:0102756); PF08392.11 FAE1/Type III polyketide synthase-like protein TRINITY_DN23984_c1_g2_i7 49.94291876 85.99589041 13.8899471 0.161518731 -2.630226613 5.56E-11 9.10E-10 Down 5.400564 5.01579 4.029338 0.603751 0.3392595 0.9302886 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23984_c1_g4_i2 128.0690648 253.5212756 2.61685388 0.010322029 -6.598129645 2.24E-67 3.59E-65 Down 5.232923 4.069049 5.129637 0.02588617 0.02569528 0.05337122 XP_016510487.1 PREDICTED: uncharacterized protein LOC107827798 [Nicotiana tabacum] Q9UUA2|PIF1_SCHPO ATP-dependent DNA helicase pfh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pfh1 PE=1 SV=1 -- -- -- -- -- -- KOG0987 DNA helicase PIF1/RRM3 [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " L COG0507 exodeoxyribonuclease v alpha Biological Process: telomere maintenance (GO:0000723);|Cellular Component: nuclear chromatin (GO:0000790);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: replication fork (GO:0005657);|Cellular Component: nuclear telomeric heterochromatin (GO:0005724);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: DNA replication (GO:0006260);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: ATPase activity (GO:0016887);|Molecular Function: single-stranded DNA-dependent ATP-dependent DNA helicase activity (GO:0017116);|Biological Process: replication fork processing (GO:0031297);|Biological Process: DNA duplex unwinding (GO:0032508);|Molecular Function: ATP-dependent 5'-3' DNA/RNA helicase activity (GO:0033682);|Cellular Component: site of double-strand break (GO:0035861);|Molecular Function: ATP-dependent 5'-3' DNA helicase activity (GO:0043141);|Biological Process: mitochondrial DNA repair (GO:0043504);|Cellular Component: nuclear replisome (GO:0043601);|Biological Process: G-quadruplex DNA unwinding (GO:0044806);|Molecular Function: G-quadruplex DNA binding (GO:0051880);|Molecular Function: ATP-dependent protein-DNA complex displacement activity (GO:0061995);|Molecular Function: flap-structured DNA binding (GO:0070336);|Cellular Component: nuclear rDNA heterochromatin (GO:1902377);|Biological Process: DNA strand elongation involved in mitotic DNA replication (GO:1902983);|Biological Process: removal of RNA primer involved in mitotic DNA replication (GO:1903469);|Biological Process: positive regulation of G-quadruplex DNA unwinding (GO:1905467);|Molecular Function: single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity (GO:1990518);|Molecular Function: DNA/DNA annealing activity (GO:1990814); "PF05970.13,PF13604.5,PF14214.5" PIF1-like helicase|AAA domain|Helitron helicase-like domain at N-terminus TRINITY_DN23986_c1_g2_i1 60.01034409 90.0268003 29.99388788 0.33316621 -1.585686005 0.006997145 0.028243057 Down 23.24438 8.722055 19.0294 4.99658 4.976759 3.742471 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23986_c1_g3_i1 15.35939924 30.71879848 0 0 #NAME? 2.80E-10 4.24E-09 Down 2.834163 4.818457 4.306465 4.91E-40 3.06E-27 3.24E-31 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23987_c0_g2_i2 61.583593 85.56474884 37.60243715 0.439461784 -1.186190383 0.00062792 0.003454092 Down 10.74376 17.24973 11.04417 4.316241 4.320166 5.248916 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23987_c0_g3_i1 9.882608958 19.76521792 0 0 #NAME? 1.11E-06 1.06E-05 Down 3.766351 4.016292 1.450097 0 0 0 XP_012840638.1 "PREDICTED: NADH dehydrogenase [ubiquinone] complex I, assembly factor 7-like [Erythranthe guttata]" -- -- sind:105167677 K18164 NDUFAF7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7 -- -- KOG2901 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S COG1565 "NADH dehydrogenase ubiquinone complex I, assembly factor 7" -- -- -- TRINITY_DN23989_c0_g2_i1 11.21197359 19.15328216 3.270665017 0.170762639 -2.549935727 0.023401038 0.076912845 Down 0.8493354 3.058956 4.53677 0.2006913 0.9208808 7.95E-09 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23993_c0_g4_i1 98.76670654 146.6261493 50.9072638 0.347190894 -1.526198986 6.00E-06 5.05E-05 Down 6.661612 4.852661 7.955767 1.291253 2.204008 1.985588 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN23993_c0_g7_i1 21.79600278 31.25540042 12.33660513 0.394703154 -1.341160046 0.028685087 0.090960682 Down 3.774269 2.884206 1.806328 1.495079 0.1365038 1.005952 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24002_c2_g3_i1 85.75642185 49.91311883 121.5997249 2.436227744 1.284649006 0.000611637 0.003373104 Up 5.938118 2.855653 6.732496 7.233194 11.90367 11.37966 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24017_c0_g3_i1 4.13885766 8.277715319 0 0 #NAME? 0.003726265 0.016476365 Down 0.8184358 2.356789 0.9422723 4.97E-29 1.26E-66 2.45E-34 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24021_c2_g3_i1 105.8228748 206.4120418 5.23370776 0.025355632 -5.301549959 2.26E-49 2.42E-47 Down 8.590462 7.339452 6.899542 0.1277194 0.1279747 0.1991628 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24026_c0_g1_i8 76.95604965 41.40593431 112.506165 2.717150739 1.442094604 0.011168107 0.041707434 Up 2.489204 3.456212 3.745042 4.429688 10.47956 6.435602 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN24037_c0_g3_i5 31.35220864 18.27926276 44.42515451 2.430358111 1.281168909 0.005470928 0.022890759 Up 0.7935595 1.247372 0.9666948 2.078668 2.184404 1.610629 XP_011090467.1 methionine aminopeptidase 1A [Sesamum indicum] Q9SLN5|MAP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana OX=3702 GN=MAP1A PE=1 SV=1 sind:105171135 K01265 map methionyl aminopeptidase -- -- KOG2738 Putative methionine aminopeptidase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " J COG0024 Removes the N-terminal methionine from nascent proteins (By similarity) Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: protein processing (GO:0016485);|Biological Process: N-terminal protein amino acid modification (GO:0031365);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: metalloaminopeptidase activity (GO:0070006);|Biological Process: protein initiator methionine removal (GO:0070084); -- -- TRINITY_DN24038_c0_g1_i1 31.93429548 20.51025367 43.35833729 2.113983474 1.079964098 0.022625314 0.074905616 Up 4.846425 1.979868 4.95916 7.343935 4.223879 8.491943 RLM87005.1 hypothetical protein C2845_PM04G19240 [Panicum miliaceum] Q9SAB5|FBLK2_ARATH Putative F-box/LRR-repeat/kelch-repeat protein At1g11620 OS=Arabidopsis thaliana OX=3702 GN=At1g11620 PE=4 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24039_c0_g1_i5 27.54601212 55.09202423 0 0 #NAME? 9.28E-18 2.63E-16 Down 3.998848 3.441088 2.899719 2.68E-69 3.75E-36 7.10E-49 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2403_c0_g1_i1 6.64334803 2.391659921 10.89503614 4.555428656 2.187586815 0.045190974 0.130734426 Up 0.2965005 0.5794578 0.2274671 1.023972 1.008927 2.449977 XP_012846096.1 PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38100 [Erythranthe guttata] Q9FKR0|MT878_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana OX=3702 GN=At5g38780 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111PH9 methyltransferase Molecular Function: methyltransferase activity (GO:0008168);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN24053_c0_g1_i10 492.7930233 258.3736593 727.2123874 2.814576337 1.492917777 7.85E-23 3.02E-21 Up 9.06029 10.33734 9.5628 24.49972 21.19132 20.01369 XP_011088457.1 purple acid phosphatase 2 [Sesamum indicum] Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas OX=4120 GN=PAP2 PE=1 SV=1 -- -- -- -- -- -- KOG1378 Purple acid phosphatase [G] METABOLISM Carbohydrate transport and metabolism S COG1409 "Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes (By similarity)" Molecular Function: acid phosphatase activity (GO:0003993);|Cellular Component: extracellular region (GO:0005576);|Molecular Function: metal ion binding (GO:0046872); "PF16656.4,PF14008.5" "Purple acid Phosphatase, N-terminal domain|Iron/zinc purple acid phosphatase-like protein C" TRINITY_DN24069_c0_g1_i4 1092.737764 699.4457127 1486.029816 2.124582063 1.08717907 2.04E-31 1.20E-29 Up 29.86052 30.78341 32.60992 54.97356 53.02513 51.83649 XP_011089020.1 "4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic isoform X2 [Sesamum indicum]" Q42948|DAPA_TOBAC "4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=DHPS1 PE=2 SV=1" sind:105170527 K01714 dapA 4-hydroxy-tetrahydrodipicolinate synthase ko00261|ko00300 Monobactam biosynthesis|Lysine biosynthesis -- -- -- -- -- E COG0329 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (By similarity) Molecular Function: 4-hydroxy-tetrahydrodipicolinate synthase (GO:0008840);|Biological Process: lysine biosynthetic process via diaminopimelate (GO:0009089);|Cellular Component: chloroplast (GO:0009507);|Biological Process: diaminopimelate biosynthetic process (GO:0019877); PF00701.21 Dihydrodipicolinate synthetase family TRINITY_DN24070_c1_g1_i1 11.26863017 22.53726035 0 0 #NAME? 1.47E-07 1.58E-06 Down 1.099548 2.891528 1.938783 0 0 0 XP_010688794.1 PREDICTED: polyadenylate-binding protein 2 [Beta vulgaris subsp. vulgaris] O22173|PABP4_ARATH Polyadenylate-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=PAB4 PE=1 SV=1 bvg:104902638 K13126 PABPC polyadenylate-binding protein ko03018|ko03015|ko03013 RNA degradation|mRNA surveillance pathway|RNA transport KOG0123 Polyadenylate-binding protein (RRM superfamily) [AJ] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING "RNA processing and modification |Translation, ribosomal structure and biogenesis " -- -- -- Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: mRNA 3'-UTR binding (GO:0003730);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: regulation of translation (GO:0006417);|Molecular Function: poly(A) binding (GO:0008143);|Molecular Function: poly(U) RNA binding (GO:0008266);|Biological Process: viral process (GO:0016032);|Biological Process: response to cadmium ion (GO:0046686);|Cellular Component: ribonucleoprotein complex (GO:1990904); -- -- TRINITY_DN24070_c1_g2_i4 18.97951155 37.95902311 0 0 #NAME? 2.84E-07 2.95E-06 Down 3.076392 1.741585 5.119914 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24070_c1_g3_i1 25.95428125 51.90856251 0 0 #NAME? 1.91E-12 3.61E-11 Down 6.121985 7.700886 3.522374 0 0 0 KVH93299.1 "Nucleotide-binding, alpha-beta plait [Cynara cardunculus var. scolymus]" P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=1 bvg:104902638 K13126 PABPC polyadenylate-binding protein ko03018|ko03015|ko03013 RNA degradation|mRNA surveillance pathway|RNA transport KOG0123 Polyadenylate-binding protein (RRM superfamily) [AJ] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING "RNA processing and modification |Translation, ribosomal structure and biogenesis " S ENOG410XR5X "poly(A) binding protein, cytoplasmic" "Biological Process: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: mRNA 3'-UTR binding (GO:0003730);|Molecular Function: translation initiation factor activity (GO:0003743);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: translational initiation (GO:0006413);|Biological Process: regulation of translational initiation (GO:0006446);|Molecular Function: poly(A) binding (GO:0008143);|Molecular Function: poly(U) RNA binding (GO:0008266);|Biological Process: response to salt stress (GO:0009651);|Biological Process: viral process (GO:0016032);|Biological Process: regulation of nuclear-transcribed mRNA poly(A) tail shortening (GO:0060211);|Biological Process: regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (GO:1900151);|Cellular Component: ribonucleoprotein complex (GO:1990904);" -- -- TRINITY_DN24078_c2_g12_i1 56.37995034 112.7599007 0 0 #NAME? 1.60E-35 1.09E-33 Down 7.614319 7.993496 6.28296 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24078_c2_g14_i1 21.31456213 0 42.62912425 Inf Inf 6.39E-05 0.000441379 Up 0 1.24E-68 4.14E-55 2.426988 3.703477 10.05365 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24078_c2_g2_i2 237.7161831 417.1987883 58.23357777 0.139582327 -2.840811805 5.79E-16 1.44E-14 Down 44.56625 48.26186 64.59313 3.825763 4.440341 9.729618 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24078_c2_g4_i1 10.52457762 0.312089676 20.73706555 66.44585563 6.054107313 0.019954923 0.06768897 Up 0.04203298 0.1277249 0.002130838 2.960957 7.072092 4.03E-10 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24078_c2_g5_i1 19.25066867 4.027039229 34.47429811 8.560705805 3.097729747 2.70E-06 2.42E-05 Up 0.4113287 0.3970702 0.5256473 3.2827 3.331358 2.847611 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24079_c0_g5_i1 4.656438132 9.312876264 0 0 #NAME? 0.010268826 0.038911708 Down 2.465661 4.88E-07 2.2417 0.003157351 4.71E-11 7.15E-92 XP_016496245.1 "PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Nicotiana tabacum]" Q9LY77|ACA12_ARATH "Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA12 PE=2 SV=1" jcu:105632218 K01537 E3.6.3.8 Ca2+-transporting ATPase -- -- KOG0204 Calcium transporting ATPase [P] METABOLISM Inorganic ion transport and metabolism P ENOG410XNNC "ATPase, Ca transporting, plasma membrane" Molecular Function: calcium-transporting ATPase activity (GO:0005388);|Molecular Function: calmodulin binding (GO:0005516);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of plasma membrane (GO:0005887);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN24079_c0_g6_i1 3.658760063 7.317520126 0 0 #NAME? 0.007288508 0.029216466 Down 2.714283 0.3811839 1.518818 0 0 0 GAU44274.1 hypothetical protein TSUD_135150 [Trifolium subterraneum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24081_c0_g1_i3 112.6886865 68.07268112 157.3046919 2.310834381 1.208413865 1.00E-06 9.61E-06 Up 2.640205 1.539843 2.581266 4.410595 4.305216 3.882827 XP_011082908.1 "pentatricopeptide repeat-containing protein At2g42920, chloroplastic isoform X1 [Sesamum indicum]" Q9SJG6|PP200_ARATH "Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1" -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- "PF13041.5,PF01535.19,PF12854.6,PF13812.5,PF17177.3" PPR repeat family|PPR repeat|PPR repeat|Pentatricopeptide repeat domain|Pentacotripeptide-repeat region of PRORP TRINITY_DN24086_c0_g1_i2 105.7871063 28.50756467 183.066648 6.421686668 2.682952274 1.33E-07 1.44E-06 Up 1.484112 1.219663 1.302489 4.494148 8.890829 7.342884 BAM29292.1 chalcone synthase [Antirrhinum majus] P06515|CHSY_ANTMA Chalcone synthase OS=Antirrhinum majus OX=4151 GN=CHS PE=3 SV=1 sind:105171854 K00660 CHS chalcone synthase ko04712|ko00941 Circadian rhythm - plant|Flavonoid biosynthesis -- -- -- -- -- Q COG3424 synthase Biological Process: flavonoid biosynthetic process (GO:0009813);|Molecular Function: naringenin-chalcone synthase activity (GO:0016210); "PF00195.18,PF02797.14,PF08545.9,PF08392.11" "Chalcone and stilbene synthases, N-terminal domain|Chalcone and stilbene synthases, C-terminal domain|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|FAE1/Type III polyketide synthase-like protein" TRINITY_DN24086_c0_g3_i1 144.247532 11.88140699 276.613657 23.28122058 4.541094793 5.00E-32 3.01E-30 Up 0.3164434 0.6751096 0.7022648 12.64613 9.019968 9.68089 AKI30817.1 chalcone synthase [Phlomoides rotata] P06515|CHSY_ANTMA Chalcone synthase OS=Antirrhinum majus OX=4151 GN=CHS PE=3 SV=1 sind:105171854 K00660 CHS chalcone synthase ko04712|ko00941 Circadian rhythm - plant|Flavonoid biosynthesis -- -- -- -- -- Q COG3424 synthase Biological Process: flavonoid biosynthetic process (GO:0009813);|Molecular Function: naringenin-chalcone synthase activity (GO:0016210); "PF00195.18,PF02797.14,PF08545.9,PF08392.11" "Chalcone and stilbene synthases, N-terminal domain|Chalcone and stilbene synthases, C-terminal domain|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|FAE1/Type III polyketide synthase-like protein" TRINITY_DN24089_c0_g1_i1 113.2638637 69.17154602 157.3561814 2.274868648 1.185783246 3.66E-05 0.000266206 Up 10.15893 17.26329 9.896239 26.5383 23.3989 18.16888 XP_011101751.1 "ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Sesamum indicum]" Q9ZPR0|COQ4_ARATH "Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g03690 PE=2 SV=1" sind:105179813 K18586 COQ4 ubiquinone biosynthesis protein COQ4 -- -- KOG3244 Protein involved in ubiquinone biosynthesis [H] METABOLISM Coenzyme transport and metabolism H COG5031 Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides (By similarity) Biological Process: ubiquinone biosynthetic process (GO:0006744);|Cellular Component: extrinsic component of mitochondrial inner membrane (GO:0031314); PF05019.12 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 TRINITY_DN24094_c0_g1_i1 48.4153168 30.32137359 66.50926001 2.193477805 1.133220109 0.002343403 0.011033514 Up 3.643108 3.992117 4.107849 5.987756 7.58853 7.168367 BAF96583.1 lignan glucosyltransferase [Sesamum radiatum] D3THI6|U7A15_MALDO UDP-glycosyltransferase 71A15 OS=Malus domestica OX=3750 GN=UGT71A15 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glucosyltransferase activity (GO:0035251); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN24101_c0_g2_i1 775.6000861 509.8682615 1041.331911 2.042354838 1.030233542 7.32E-23 2.83E-21 Up 17.78541 18.96307 18.20507 28.78038 31.14545 30.6464 XP_011081001.1 aspartate aminotransferase isoform X1 [Sesamum indicum] Q9C969|ISS1_ARATH Aromatic aminotransferase ISS1 OS=Arabidopsis thaliana OX=3702 GN=ISS1 PE=1 SV=1 -- -- -- -- -- -- KOG0257 "Kynurenine aminotransferase, glutamine transaminase K" [E] METABOLISM Amino acid transport and metabolism E COG0436 aminotransferase Molecular Function: L-tyrosine:2-oxoglutarate aminotransferase activity (GO:0004838);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: methionine metabolic process (GO:0006555);|Biological Process: L-phenylalanine metabolic process (GO:0006558);|Biological Process: tryptophan metabolic process (GO:0006568);|Biological Process: tryptophan catabolic process (GO:0006569);|Biological Process: tyrosine metabolic process (GO:0006570);|Molecular Function: transaminase activity (GO:0008483);|Biological Process: aromatic amino acid family metabolic process (GO:0009072);|Biological Process: shade avoidance (GO:0009641);|Biological Process: ethylene biosynthetic process (GO:0009693);|Biological Process: phenylpropanoid metabolic process (GO:0009698);|Biological Process: auxin biosynthetic process (GO:0009851);|Biological Process: auxin homeostasis (GO:0010252);|Molecular Function: methionine-oxo-acid transaminase activity (GO:0010326);|Biological Process: negative regulation of ethylene biosynthetic process (GO:0010366);|Molecular Function: pyridoxal phosphate binding (GO:0030170);|Molecular Function: L-tryptophan:2-oxoglutarate aminotransferase activity (GO:0050362);|Biological Process: negative regulation of indoleacetic acid biosynthetic process via tryptophan (GO:1901997); PF00155.20 Aminotransferase class I and II TRINITY_DN24102_c0_g2_i1 28.63220132 38.35236647 18.91203618 0.493112627 -1.020010899 0.045253812 0.130891188 Down 2.778961 2.015445 1.371548 1.202758 0.6030109 0.6392487 PIN27121.1 Starch synthase [Handroanthus impetiginosus] P93568|SSY1_SOLTU "Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 PE=2 SV=1" sind:105155184 K00703 "E2.4.1.21, glgA" starch synthase ko00500 Starch and sucrose metabolism -- -- -- -- -- G COG0297 starch synthase activity "Molecular Function: glycogen (starch) synthase activity (GO:0004373);|Molecular Function: starch synthase activity (GO:0009011);|Cellular Component: amyloplast (GO:0009501);|Cellular Component: chloroplast (GO:0009507);|Biological Process: starch biosynthetic process (GO:0019252);|Molecular Function: alpha-1,4-glucan synthase activity (GO:0033201);" -- -- TRINITY_DN24109_c0_g1_i1 106.1898629 68.94214647 143.4375793 2.080549949 1.056964924 1.67E-05 0.000129949 Up 3.848512 4.772674 3.173095 6.046003 7.656766 5.94766 PIN06047.1 hypothetical protein CDL12_21417 [Handroanthus impetiginosus] O49459|NAC73_ARATH NAC domain-containing protein 73 OS=Arabidopsis thaliana OX=3702 GN=NAC073 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YF7Q NAC domain-containing protein 8-like "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: regulation of secondary cell wall biogenesis (GO:2000652);" PF02365.14 No apical meristem (NAM) protein TRINITY_DN24116_c0_g1_i3 85.60867658 118.279376 52.93797718 0.447567268 -1.159823563 4.54E-05 0.000324107 Down 4.28411 4.318067 3.983898 2.011811 1.400618 1.15202 BAE06271.1 cyclin A [Scutellaria baicalensis] Q9C6Y3|CCA11_ARATH Cyclin-A1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCA1-1 PE=1 SV=1 -- -- -- -- -- -- KOG0654 G2/Mitotic-specific cyclin A [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D COG5024 g2 mitotic-specific Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);|Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: cyclin-dependent protein kinase holoenzyme complex (GO:0000307);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: regulation of mitotic nuclear division (GO:0007088);|Biological Process: positive regulation of cell proliferation (GO:0008284);|Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);|Molecular Function: protein kinase binding (GO:0019901);|Biological Process: positive regulation of cell cycle (GO:0045787);|Biological Process: cell division (GO:0051301); "PF00134.22,PF02984.18" "Cyclin, N-terminal domain|Cyclin, C-terminal domain" TRINITY_DN24118_c0_g1_i1 7.565661114 15.13132223 0 0 #NAME? 2.29E-05 0.000173378 Down 1.243966 1.500513 1.779858 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24118_c1_g1_i1 44.58015231 71.39017096 17.77013367 0.24891569 -2.006270924 7.62E-07 7.45E-06 Down 5.90481 5.036805 5.869694 1.31578 1.148762 0.9170865 XP_011071659.1 omega-hydroxypalmitate O-feruloyl transferase-like [Sesamum indicum] Q9FLT0|TSN2_ARATH Ribonuclease TUDOR 2 OS=Arabidopsis thaliana OX=3702 GN=TSN2 PE=1 SV=1 sind:105157060 K15400 HHT1 omega-hydroxypalmitate O-feruloyl transferase ko00073 "Cutin, suberine and wax biosynthesis" KOG2039 Transcriptional coactivator p100 [K] INFORMATION STORAGE AND PROCESSING Transcription S ENOG4111F55 "BAHD family acyltransferase, clade V (EC 2.3.1.-)" Cellular Component: P-body (GO:0000932);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: nuclease activity (GO:0004518);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nuclear envelope (GO:0005635);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: cytosol (GO:0005829);|Biological Process: mRNA processing (GO:0006397);|Biological Process: RNA catabolic process (GO:0006401);|Biological Process: mRNA catabolic process (GO:0006402);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to salt stress (GO:0009651);|Biological Process: gibberellin biosynthetic process (GO:0009686);|Biological Process: seed germination (GO:0009845);|Biological Process: positive regulation of gibberellin biosynthetic process (GO:0010372);|Cellular Component: cytoplasmic stress granule (GO:0010494);|Cellular Component: RISC complex (GO:0016442);|Biological Process: gene silencing by RNA (GO:0031047);|Biological Process: cellular response to heat (GO:0034605);|Biological Process: response to cadmium ion (GO:0046686);|Cellular Component: perinuclear region of cytoplasm (GO:0048471); -- -- TRINITY_DN24118_c2_g3_i10 22.21962215 36.22363078 8.215613508 0.226802596 -2.14049094 0.000201376 0.001251516 Down 1.606398 1.908022 2.290454 0.5371261 0.1333328 0.4182318 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24118_c2_g4_i1 35.17412047 49.91660449 20.43163645 0.40931543 -1.28871504 0.003527744 0.015693345 Down 5.581882 6.125963 5.669714 2.548524 1.425437 1.723151 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24131_c0_g1_i3 485.6884683 181.4574445 789.9194921 4.353194183 2.122074376 1.83E-58 2.47E-56 Up 7.323154 7.304793 7.585095 28.03953 25.37949 24.61717 XP_012843511.1 PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate oxidase 5 [Erythranthe guttata] Q9FLV0|DMR6_ARATH Protein DOWNY MILDEW RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=DMR6 PE=1 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: defense response to oomycetes (GO:0002229);|Biological Process: response to oomycetes (GO:0002239);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to fungus (GO:0009620);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: flavonoid biosynthetic process (GO:0009813);|Biological Process: leaf senescence (GO:0010150);|Molecular Function: flavone synthase activity (GO:0033759);|Molecular Function: salicylate 5-hydroxylase activity (GO:0034785);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: salicylic acid catabolic process (GO:0046244);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213); "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN24134_c0_g1_i7 146.0053765 292.010753 0 0 #NAME? 4.59E-89 1.03E-86 Down 10.11295 9.746704 9.023124 0 0 0 XP_012832880.1 PREDICTED: uncharacterized protein LOC105953742 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKQ9 NA -- PF03004.13 Plant transposase (Ptta/En/Spm family) TRINITY_DN24136_c0_g1_i1 119.9883029 69.25999883 170.7166069 2.464865864 1.301509139 3.55E-08 4.18E-07 Up 2.328991 3.509508 2.248989 5.983764 4.567853 5.550447 AYK02734.1 beta-glucosidase 4 [Lamium galeobdolon] Q9FZE0|BGL40_ARATH Beta-glucosidase 40 OS=Arabidopsis thaliana OX=3702 GN=BGLU40 PE=2 SV=1 sind:105160028 K01188 E3.2.1.21 beta-glucosidase ko00940|ko00460|ko00500 Phenylpropanoid biosynthesis|Cyanoamino acid metabolism|Starch and sucrose metabolism KOG0626 "Beta-glucosidase, lactase phlorizinhydrolase, and related proteins" [G] METABOLISM Carbohydrate transport and metabolism G COG2723 beta-glucosidase Biological Process: carbohydrate metabolic process (GO:0005975);|Molecular Function: beta-glucosidase activity (GO:0008422);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: apoplast (GO:0048046);|Molecular Function: scopolin beta-glucosidase activity (GO:0102483); PF00232.17 Glycosyl hydrolase family 1 TRINITY_DN24149_c0_g3_i1 19.78523748 33.20822921 6.36224574 0.19158642 -2.383932793 0.000139452 0.000897511 Down 4.932647 2.862224 4.398165 0.2968889 0.5954344 0.8864395 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24152_c0_g1_i7 123.4311131 235.3263842 11.53584206 0.049020606 -4.350467858 8.66E-28 4.38E-26 Down 8.886165 6.123911 6.848107 0.2476416 0.2859098 0.3334333 XP_008674363.1 uncharacterized protein LOC103650567 isoform X1 [Zea mays] Q94K49|ALP1_ARATH Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=ALP1 PE=1 SV=1 -- -- -- -- -- -- KOG4585 Predicted transposase [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG411206Y transposon protein Molecular Function: chromatin binding (GO:0003682);|Molecular Function: nuclease activity (GO:0004518);|Cellular Component: nucleus (GO:0005634);|Biological Process: negative regulation of chromatin silencing (GO:0031936);|Cellular Component: ESC/E(Z) complex (GO:0035098);|Cellular Component: PRC1 complex (GO:0035102);|Molecular Function: metal ion binding (GO:0046872); "PF13359.5,PF04827.13" DDE superfamily endonuclease|Plant transposon protein TRINITY_DN24162_c0_g3_i1 33.93775874 19.58438892 48.29112856 2.465797057 1.302054066 0.004203996 0.018273677 Up 1.87572 1.985379 2.725465 4.802641 4.055204 4.209961 PIN25471.1 hypothetical protein CDL12_01786 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YH4G NA -- -- -- TRINITY_DN24167_c0_g1_i11 104.329546 189.0461385 19.61295354 0.103746914 -3.268859667 2.88E-18 8.43E-17 Down 4.979183 6.760757 4.580342 0.6308492 0.3914915 0.3346377 XP_011092433.1 BRCA1-associated protein [Sesamum indicum] O80594|ERG28_ARATH Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana OX=3702 GN=At1g10030 PE=2 SV=2 -- -- -- -- -- -- KOG3455 Predicted membrane protein [S] POORLY CHARACTERIZED Function unknown S ENOG4111J9X Chromosome 14 open reading frame 1 "Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: ergosterol biosynthetic process (GO:0006696);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: protein binding, bridging (GO:0030674);" -- -- TRINITY_DN24170_c0_g3_i1 23.39971705 31.57549499 15.22393912 0.482144116 -1.052463653 0.048981904 0.139356662 Down 3.746327 7.448927 6.201843 2.796346 1.829524 2.115385 PIM98129.1 hypothetical protein CDL12_29395 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24174_c2_g4_i2 13.18991299 20.77333509 5.606490893 0.26988882 -1.88956288 0.013505377 0.048973446 Down 2.070842 0.8584473 1.094035 0.3595116 0.1546705 0.3499059 KYP38490.1 Retrotransposable element Tf2 [Cajanus cajan] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN24181_c1_g2_i6 124.3431085 76.42753474 172.2586823 2.25388249 1.1724123 9.59E-07 9.23E-06 Up 4.158828 5.764413 6.700035 9.413651 9.84184 10.98177 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24181_c2_g2_i2 90.43006402 140.1434478 40.71668029 0.29053574 -1.783212449 0.040119842 0.118929013 Down 24.00445 23.09481 5.412025 5.36011 3.805458 3.125917 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24184_c0_g2_i1 33.83086964 60.70543451 6.956304758 0.114591137 -3.125432632 4.11E-09 5.46E-08 Down 7.282284 5.690668 4.209398 1.139947 0.372721 1.50E-60 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24189_c0_g2_i1 9.733522423 15.7346582 3.732386646 0.23720799 -2.075775489 0.021199733 0.071004168 Down 2.285816 2.880942 2.378592 0.4049653 0.4079555 0.6540818 PIN16812.1 hypothetical protein CDL12_10543 [Handroanthus impetiginosus] Q9SQQ9|PHL9_ARATH Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410Y9RE Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634); PF00249.30 Myb-like DNA-binding domain TRINITY_DN2418_c0_g1_i1 4.492852949 8.985705897 0 0 #NAME? 0.001956799 0.00944344 Down 1.287269 0.8218981 1.77009 0 0 0 BAG73666.1 "Rho GDP dissociation inhibitor (GDI) beta, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG3205 Rho GDP-dissociation inhibitor [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms O ENOG4111K44 Rho GDP dissociation inhibitor (GDI) -- -- -- TRINITY_DN2418_c0_g2_i1 3.236393349 6.472786698 0 0 #NAME? 0.013559795 0.049155068 Down 1.204278 0.5084532 0.7008471 0 0 0 ABM84229.1 Rho GDP dissociation inhibitor (GDI) beta [synthetic construct] O14224|GDIR_SCHPO Rho GDP-dissociation inhibitor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC6F12.06 PE=1 SV=1 -- -- -- -- -- -- KOG3205 Rho GDP-dissociation inhibitor [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms O ENOG4111K44 Rho GDP dissociation inhibitor (GDI) Molecular Function: Rho GDP-dissociation inhibitor activity (GO:0005094);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: actin filament organization (GO:0007015);|Biological Process: small GTPase mediated signal transduction (GO:0007264);|Biological Process: Rho protein signal transduction (GO:0007266);|Cellular Component: membrane (GO:0016020);|Molecular Function: Rac GTPase binding (GO:0048365); PF02115.16 RHO protein GDP dissociation inhibitor TRINITY_DN24192_c0_g1_i2 115.0112197 73.87068658 156.1517528 2.113852735 1.079874872 6.90E-06 5.75E-05 Up 9.421013 9.559482 8.444487 17.20692 13.65738 15.86291 XP_011097245.1 tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Sesamum indicum] Q9HGN6|DUS1_SCHPO tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dus1 PE=3 SV=1 sind:105176214 K05542 DUS1 tRNA-dihydrouridine synthase 1 -- -- KOG2335 tRNA-dihydrouridine synthase [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0042 Catalyzes the synthesis of dihydrouridine a modified base found in the D-loop of most tRNAs (By similarity) Biological Process: tRNA dihydrouridine synthesis (GO:0002943);|Cellular Component: nucleus (GO:0005634);|Cellular Component: mitochondrion (GO:0005739);|Molecular Function: tRNA dihydrouridine synthase activity (GO:0017150);|Molecular Function: flavin adenine dinucleotide binding (GO:0050660);|Molecular Function: tRNA-dihydrouridine17 synthase activity (GO:0102263); PF01207.16 Dihydrouridine synthase (Dus) TRINITY_DN24193_c0_g4_i1 37.02026924 66.53920686 7.501331618 0.112735513 -3.148986043 7.30E-11 1.18E-09 Down 7.371969 12.01195 9.57492 0.4812872 0.7938592 1.325827 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24195_c0_g2_i3 55.27583106 110.5516621 0 0 #NAME? 3.17E-25 1.39E-23 Down 22.71712 13.95382 22.552 3.05E-63 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24199_c0_g1_i1 54.04548485 29.9297114 78.16125829 2.611493885 1.384875325 9.37E-05 0.000625131 Up 1.017167 1.127589 1.198654 1.967841 2.968179 2.144425 XP_011075498.1 protein PHYTOCHROME KINASE SUBSTRATE 1 [Sesamum indicum] Q9SWI1|PKS1_ARATH Protein PHYTOCHROME KINASE SUBSTRATE 1 OS=Arabidopsis thaliana OX=3702 GN=PKS1 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- T ENOG4111ACR phytochrome kinase substrate "Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: red, far-red light phototransduction (GO:0009585);|Biological Process: phototropism (GO:0009638);|Biological Process: positive gravitropism (GO:0009958);|Biological Process: red or far-red light signaling pathway (GO:0010017);|Biological Process: response to red light (GO:0010114);|Biological Process: response to far red light (GO:0010218);" -- -- TRINITY_DN24201_c0_g1_i3 145.5973717 203.6641712 87.53057222 0.429778943 -1.218333295 2.76E-08 3.30E-07 Down 5.216758 5.409732 4.778303 1.598343 1.695094 2.056841 XP_012844854.1 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Erythranthe guttata] O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF01453.23,PF00954.19,PF08276.10,PF07714.16,PF00069.24" D-mannose binding lectin|S-locus glycoprotein domain|PAN-like domain|Protein tyrosine kinase|Protein kinase domain TRINITY_DN24216_c3_g4_i9 57.8106039 110.0069856 5.614222158 0.051035142 -4.292365177 2.99E-23 1.19E-21 Down 2.623558 3.253827 3.104553 0.0777729 0.1299672 0.1686649 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24216_c3_g5_i1 12.86983494 4.955986763 20.78368311 4.19365186 2.0682071 0.023531954 0.077270398 Up 1.067239 0.9807025 0.2180232 4.417914 1.422658 2.077626 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24217_c2_g2_i1 15.33858969 24.98456662 5.692612756 0.227845167 -2.133874326 0.002290389 0.010809695 Down 4.447657 5.14263 4.504843 0 0.6669735 1.936063 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24217_c3_g2_i1 39.37207208 72.73358575 6.010558402 0.082638005 -3.597050769 2.29E-13 4.68E-12 Down 2.43588 2.379073 1.981247 0.1477273 0.07281535 0.2376117 XP_008376045.1 PREDICTED: uncharacterized protein LOC103439283 [Malus domestica] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111DM2 NA -- PF13961.5 Domain of unknown function (DUF4219) TRINITY_DN24220_c0_g4_i2 23.52196341 2.184627732 44.85929909 20.53407015 4.359947713 3.79E-11 6.35E-10 Up 0 0.4644253 0 2.375322 2.112459 3.543278 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24224_c1_g1_i1 15.73680668 8.2070231 23.26659027 2.834960982 1.503328879 0.026317776 0.084696407 Up 1.062608 1.551292 2.030076 3.801331 4.457849 2.555931 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24224_c4_g1_i1 29.29567091 58.59134181 0 0 #NAME? 4.63E-19 1.43E-17 Down 7.935212 9.334219 10.81865 0 2.59E-76 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24230_c0_g1_i1 114.7496466 71.01315176 158.4861414 2.231785768 1.158198548 2.62E-06 2.34E-05 Up 2.71861 2.526908 3.251452 4.435131 5.240739 5.632834 XP_011085204.1 "ferredoxin--NADP reductase, root-type isozyme, chloroplastic [Sesamum indicum]" O04397|FENR2_TOBAC "Ferredoxin--NADP reductase, root-type isozyme, chloroplastic OS=Nicotiana tabacum OX=4097 PE=2 SV=1" sind:105167261 K02641 petH ferredoxin--NADP+ reductase ko00195 Photosynthesis KOG1158 NADP/FAD dependent oxidoreductase [C] METABOLISM Energy production and conversion P COG0369 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component (By similarity) Molecular Function: ferredoxin-NADP+ reductase activity (GO:0004324);|Cellular Component: chloroplast (GO:0009507);|Biological Process: photosynthesis (GO:0015979); PF00175.20 Oxidoreductase NAD-binding domain TRINITY_DN24244_c0_g2_i2 14.98950222 27.68255353 2.296450918 0.082956614 -3.591499174 8.03E-06 6.61E-05 Down 4.789298 3.787604 3.363885 0.1572635 0 0.6880053 XP_011074521.1 uncharacterized protein LOC105159227 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z6G5 NA -- -- -- TRINITY_DN24250_c0_g1_i1 101.2767588 139.4830996 63.07041791 0.452172472 -1.145054931 0.000117098 0.000764482 Down 11.06278 9.68642 6.980476 3.587071 2.495875 4.103135 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24250_c1_g1_i2 9.229625588 18.45925118 0 0 #NAME? 2.13E-06 1.94E-05 Down 2.190258 3.212632 2.822853 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24260_c0_g1_i2 44.46226052 86.66462844 2.259892593 0.026076297 -5.261117176 1.47E-07 1.58E-06 Down 11.76745 5.683801 5.59069 0.2550547 0 0.2468854 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24260_c0_g2_i1 15.51644233 31.03288466 0 0 #NAME? 2.65E-10 4.03E-09 Down 6.025757 4.264979 4.587045 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24260_c1_g1_i27 141.0913895 194.9190222 87.26375674 0.447692358 -1.159420402 1.58E-07 1.70E-06 Down 13.52098 13.83882 13.99955 4.669156 5.285499 4.946823 PKA46214.1 Shaggy-related protein kinase theta [Apostasia shenzhenica] Q40518|MSK1_TOBAC Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum OX=4097 GN=NTK-1 PE=2 SV=1 -- -- -- -- -- -- KOG0658 Glycogen synthase kinase-3 [G] METABOLISM Carbohydrate transport and metabolism T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524); -- -- TRINITY_DN24260_c1_g2_i1 37.8010707 63.60421839 11.99792301 0.188634077 -2.406337773 6.49E-06 5.43E-05 Down 12.39956 14.11738 7.664113 3.053452 0 2.261676 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24262_c0_g2_i1 22.98077161 33.61229219 12.34925103 0.367402823 -1.444565384 0.010361148 0.039203433 Down 4.071468 1.899283 2.445577 0.6040751 0.7426158 1.208862 XP_012848736.1 PREDICTED: probable amino acid permease 7 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24263_c0_g2_i1 9.90853759 17.53890342 2.278171756 0.129892485 -2.944610126 0.026324573 0.084712275 Down 5.752894 4.232971 0.7506099 0.3994595 0 0.8191406 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24265_c0_g2_i4 57.74597836 107.7250596 7.766897092 0.07209926 -3.793871736 3.41E-20 1.13E-18 Down 7.148356 6.852829 7.538715 0.4411418 0.4373462 0.3074639 XP_022846407.1 lysM domain receptor-like kinase 3 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN24265_c0_g3_i1 26.83109862 38.51419141 15.14800584 0.39330972 -1.346262254 0.009889199 0.037715903 Down 3.920576 2.460766 2.30696 1.089368 1.021893 0.6588814 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24266_c0_g2_i1 8.138959607 13.19161244 3.086306774 0.233959782 -2.095667544 0.032526111 0.100764449 Down 3.79359 1.478831 2.417799 0 0 1.578221 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24271_c0_g2_i5 104.9013458 155.8989503 53.90374138 0.345760772 -1.532153897 5.06E-09 6.63E-08 Down 13.48643 15.0983 12.54962 3.887783 4.897571 2.636133 PIN18660.1 Aldehyde dehydrogenase [Handroanthus impetiginosus] Q0WM29|MMSA_ARATH "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALDH6B2 PE=1 SV=2" sind:105169296 K00140 "mmsA, iolA, ALDH6A1" malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase ko00562|ko00640|ko00410|ko00280 "Inositol phosphate metabolism|Propanoate metabolism|beta-Alanine metabolism|Valine, leucine and isoleucine degradation" KOG2449 Methylmalonate semialdehyde dehydrogenase [EG] METABOLISM|METABOLISM Amino acid transport and metabolism |Carbohydrate transport and metabolism I ENOG410XNP1 Dehydrogenase Molecular Function: methylmalonate-semialdehyde dehydrogenase (acylating) activity (GO:0004491);|Molecular Function: copper ion binding (GO:0005507);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: thymine catabolic process (GO:0006210);|Biological Process: valine metabolic process (GO:0006573);|Biological Process: valine catabolic process (GO:0006574);|Biological Process: response to oxidative stress (GO:0006979);|Molecular Function: malonate-semialdehyde dehydrogenase (acetylating) activity (GO:0018478); -- -- TRINITY_DN24275_c0_g2_i1 29.65011934 19.47200994 39.82822874 2.045409224 1.032389511 0.03282264 0.101493058 Up 4.126225 2.631607 4.221723 5.49412 5.824927 6.731928 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF13855.5,PF12799.6" Leucine rich repeat|Leucine Rich repeats (2 copies) TRINITY_DN24276_c1_g2_i9 28.80117623 55.04033607 2.562016393 0.046547979 -4.425137667 1.10E-07 1.21E-06 Down 5.191748 4.28257 2.156149 0.293388 0.09551808 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24277_c2_g1_i1 70.34020041 140.6804008 0 0 #NAME? 4.19E-23 1.65E-21 Down 18.51477 10.20241 15.23873 1.88E-35 6.85E-33 1.03E-24 XP_011084348.1 RNA pseudouridine synthase 5 isoform X2 [Sesamum indicum] Q5M721|PUS5_ARATH RNA pseudouridine synthase 5 OS=Arabidopsis thaliana OX=3702 GN=At3g52260 PE=2 SV=2 -- -- -- -- -- -- KOG1919 RNA pseudouridylate synthases [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification J COG0564 pseudouridine synthase activity Biological Process: pseudouridine synthesis (GO:0001522);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: pseudouridine synthase activity (GO:0009982); -- -- TRINITY_DN24278_c0_g1_i5 12.68213286 25.36426573 0 0 #NAME? 1.53E-08 1.89E-07 Down 2.566047 2.126181 2.231629 0 0 0 PIN08215.1 Nucleoplasmin ATPase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4112DFR DNA binding protein -- -- -- TRINITY_DN24278_c0_g3_i1 36.99319103 51.08850829 22.89787378 0.448200085 -1.157785171 0.006235347 0.025549836 Down 6.740017 5.398685 6.099346 1.889907 1.298668 3.348046 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2427_c0_g1_i1 4.964867061 9.929734123 0 0 #NAME? 0.005025594 0.021292402 Down 2.738442 0.3341083 1.58467 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24283_c0_g2_i1 31.51633811 49.27314056 13.75953565 0.279250226 -1.840369645 0.000126966 0.000824162 Down 5.43236 4.636984 4.684721 2.01455 0.3079004 0.9775292 XP_011086763.1 nuclear pore complex protein NUP54 [Sesamum indicum] Q8GYF7|NUP54_ARATH Nuclear pore complex protein NUP54 OS=Arabidopsis thaliana OX=3702 GN=NUP54 PE=1 SV=1 sind:105168397 K14308 "NUP54, NUP57" nuclear pore complex protein Nup54 ko03013 RNA transport KOG3091 "Nuclear pore complex, p54 component (sc Nup57)" [YU] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Nuclear structure |Intracellular trafficking, secretion, and vesicular transport " U ENOG410XPU5 nucleoporin Cellular Component: nuclear envelope (GO:0005635);|Cellular Component: nucleolus (GO:0005730);|Biological Process: NLS-bearing protein import into nucleus (GO:0006607);|Biological Process: nuclear pore organization (GO:0006999);|Molecular Function: structural constituent of nuclear pore (GO:0017056);|Biological Process: protein localization to nuclear inner membrane (GO:0036228);|Cellular Component: nuclear pore central transport channel (GO:0044613);|Biological Process: mRNA transport (GO:0051028); -- -- TRINITY_DN24289_c1_g5_i1 36.56280955 49.92280489 23.20281421 0.46477385 -1.105399197 0.010049694 0.038203312 Down 4.317388 4.344735 3.863655 1.844255 0.816196 2.075466 PIN11738.1 hypothetical protein CDL12_15651 [Handroanthus impetiginosus] Q9SZF7|SHR_ARATH Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG41116YR Transcription factor Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: early endosome (GO:0005769);|Cellular Component: late endosome (GO:0005770);|Biological Process: asymmetric cell division (GO:0008356);|Biological Process: radial pattern formation (GO:0009956);|Biological Process: regulation of hormone metabolic process (GO:0032350);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: negative regulation of mitotic cell cycle (GO:0045930);|Biological Process: leaf development (GO:0048366);|Cellular Component: recycling endosome (GO:0055037);|Biological Process: iron ion homeostasis (GO:0055072); PF03514.13 GRAS domain family TRINITY_DN24304_c1_g1_i7 97.82839093 133.9495424 61.70723951 0.460675254 -1.11817799 2.06E-05 0.000157424 Down 9.419829 8.911115 8.622295 2.7515 2.732637 4.602628 OWM70850.1 hypothetical protein CDL15_Pgr014523 [Punica granatum] Q84MA9|Y1063_ARATH Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 OS=Arabidopsis thaliana OX=3702 GN=At1g60630 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN24304_c1_g2_i5 145.1114429 243.3202274 46.90265837 0.192761033 -2.375114658 3.68E-14 7.94E-13 Down 17.19824 17.82524 12.14553 3.185527 1.643924 2.518665 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24305_c1_g1_i1 6.588682939 12.06183311 1.115532767 0.092484513 -3.434644384 0.00608499 0.02505133 Down 2.19582 0.7974546 1.36614 0.1473168 0.1476799 0.1573926 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24309_c1_g1_i1 62.59508275 85.28269818 39.90746732 0.467943301 -1.09559436 0.002768545 0.01276382 Down 3.610354 3.921126 5.429536 1.054618 2.486904 1.362047 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24309_c1_g2_i1 31.50446856 60.8249778 2.183959311 0.035905633 -4.799646006 3.33E-14 7.18E-13 Down 3.88786 5.660485 6.84033 0.1752889 0.3485768 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24309_c1_g3_i5 127.4355804 247.7921758 7.078984946 0.028568234 -5.129444316 5.28E-57 6.90E-55 Down 17.15196 17.16445 13.30917 0.3210615 0.3203365 0.4543439 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24311_c0_g1_i4 650.4252421 356.5486839 944.3018004 2.64845123 1.405148942 2.21E-35 1.49E-33 Up 12.27476 13.64333 13.0914 28.25852 28.98566 26.12063 PIN25107.1 Serine carboxypeptidases (lysosomal cathepsin A) [Handroanthus impetiginosus] Q0WPR4|SCP34_ARATH Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana OX=3702 GN=SCPL34 PE=2 SV=2 sind:105159792 K16297 SCPL-II serine carboxypeptidase-like clade II -- -- KOG1282 Serine carboxypeptidases (lysosomal cathepsin A) [OE] CELLULAR PROCESSES AND SIGNALING|METABOLISM "Posttranslational modification, protein turnover, chaperones |Amino acid transport and metabolism " E COG2939 carboxy-peptidase Molecular Function: serine-type carboxypeptidase activity (GO:0004185);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: vacuole (GO:0005773);|Cellular Component: plant-type cell wall (GO:0009505);|Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603); PF00450.21 Serine carboxypeptidase TRINITY_DN24313_c0_g1_i2 99.68860277 135.0283517 64.34885381 0.476558093 -1.069276004 4.31E-05 0.000308629 Down 6.47024 5.564444 5.778806 1.989008 2.383185 2.47914 XP_011091519.1 probable serine/threonine-protein kinase PBL11 [Sesamum indicum] Q65XV8|RK176_ORYSJ Receptor-like cytoplasmic kinase 176 OS=Oryza sativa subsp. japonica OX=39947 GN=RLCK176 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Biological Process: innate immune response (GO:0045087); "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN24314_c0_g1_i2 142.0129204 192.793807 91.23203381 0.473210396 -1.079446325 7.15E-07 7.01E-06 Down 6.840146 7.706321 7.972445 2.998694 2.435639 3.176711 XP_011071844.1 serine/threonine-protein kinase HT1-like [Sesamum indicum] Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 -- -- -- -- -- -- KOG0192 Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524); "PF07714.16,PF00069.24,PF14531.5" Protein tyrosine kinase|Protein kinase domain|Kinase-like TRINITY_DN24315_c0_g1_i8 145.5925184 51.00117657 240.1838602 4.709378809 2.235536774 1.15E-22 4.39E-21 Up 0.8536631 0.9528873 0.9901345 3.623694 3.324792 3.682389 XP_022860306.1 uncharacterized protein LOC111380876 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN24316_c0_g1_i1 4.373494173 8.746988345 0 0 #NAME? 0.002179358 0.010362167 Down 0.9158922 0.8912939 2.145443 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24316_c2_g2_i1 175.4473507 349.7791687 1.115532767 0.003189249 -8.292567671 4.67E-101 1.19E-98 Down 5.285961 5.903992 6.243934 0.02140329 0.02098203 0.02189985 XP_021725267.1 uncharacterized protein LOC110692538 [Chenopodium quinoa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBST Mariner sub-class -- PF01498.17 Transposase TRINITY_DN24316_c2_g3_i2 160.6337618 242.637301 78.63022252 0.324064858 -1.625645513 3.91E-07 3.99E-06 Down 13.02825 8.049866 10.52353 2.808862 2.298372 3.152206 -- -- Q9XGM1|VATD_ARATH V-type proton ATPase subunit D OS=Arabidopsis thaliana OX=3702 GN=VHA-D PE=1 SV=2 cam:101513204 K02149 "ATPeV1D, ATP6M" V-type H+-transporting ATPase subunit D ko04145|ko00190 Phagosome|Oxidative phosphorylation KOG1647 "Vacuolar H+-ATPase V1 sector, subunit D" [C] METABOLISM Energy production and conversion C COG1394 Produces ATP from ADP in the presence of a proton gradient across the membrane (By similarity) "Cellular Component: plant-type vacuole (GO:0000325);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: vacuolar acidification (GO:0007035);|Cellular Component: membrane (GO:0016020);|Molecular Function: proton-transporting ATPase activity, rotational mechanism (GO:0046961);" -- -- TRINITY_DN24316_c2_g4_i1 6.011194275 12.02238855 0 0 #NAME? 0.00020654 0.001280801 Down 0.9846933 1.175275 1.85524 1.45E-10 5.76E-81 1.58E-89 XP_021742870.1 uncharacterized protein LOC110708950 [Chenopodium quinoa] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24317_c0_g3_i1 7.932644687 14.40052658 1.464762789 0.101715919 -3.297382617 0.002722162 0.012575524 Down 0.9534731 1.512495 1.853731 0.2396718 0.07963874 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24323_c0_g3_i1 22.69259114 33.93054744 11.45463483 0.337590628 -1.56665324 0.006764214 0.027434594 Down 3.640869 4.321476 2.002505 0.5877817 1.313621 0.7718613 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24330_c0_g5_i1 36.31618836 22.74853124 49.88384548 2.192838076 1.132799284 0.011087385 0.041446897 Up 1.315809 1.472841 2.243188 2.921469 2.692516 3.277371 XP_011085086.1 MLO-like protein 1 [Sesamum indicum] O49621|MLO1_ARATH MLO-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=MLO1 PE=1 SV=1 sind:105167178 K08472 MLO mlo protein -- -- -- -- -- -- -- D ENOG410ZUVB May be involved in modulation of pathogen defense and leaf cell death (By similarity) Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN24333_c0_g1_i2 37.10280748 59.28661627 14.91899869 0.251641932 -1.990555748 2.29E-05 0.000173204 Down 4.635203 8.38407 5.388399 0.9500442 1.270428 1.598505 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24333_c0_g3_i1 35.43471313 49.29906324 21.57036301 0.437541032 -1.192509777 0.007539747 0.030056622 Down 4.308179 2.913174 2.795583 1.018372 1.239313 1.264276 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24340_c0_g1_i14 374.203221 212.9901317 535.4163103 2.513808063 1.3298745 5.18E-21 1.82E-19 Up 8.601153 8.966657 8.463194 17.48977 18.04287 17.23555 XP_011073326.1 probable WRKY transcription factor 40 [Sesamum indicum] Q9SAH7|WRK40_ARATH Probable WRKY transcription factor 40 OS=Arabidopsis thaliana OX=3702 GN=WRKY40 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YHES WRKY transcription factor "Biological Process: response to molecule of bacterial origin (GO:0002237);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: response to chitin (GO:0010200);|Biological Process: regulation of defense response (GO:0031347);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Biological Process: defense response to fungus (GO:0050832);" PF03106.14 WRKY DNA -binding domain TRINITY_DN24347_c0_g1_i2 128.7659077 218.474804 39.05701136 0.178771239 -2.483813444 1.49E-23 6.00E-22 Down 6.085725 6.804865 6.751706 1.120993 0.7693821 0.9576659 PIN07366.1 hypothetical protein CDL12_20066 [Handroanthus impetiginosus] C0SVS4|PHLB_ARATH Myb family transcription factor PHL11 OS=Arabidopsis thaliana OX=3702 GN=PHL11 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YGU0 Myb-like DNA-binding domain "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);" PF14379.5 "MYB-CC type transfactor, LHEQLE motif" TRINITY_DN24349_c0_g3_i4 86.11109395 116.9268004 55.29538752 0.472906018 -1.080374595 0.000180153 0.001130918 Down 12.34646 11.52288 9.18337 4.760642 5.344662 2.478105 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24349_c0_g4_i1 3.345369642 0 6.690739284 Inf Inf 0.006925068 0.027994445 Up 0 0 0 1.646313 0.5635622 0.9569119 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24349_c0_g6_i1 7.169996475 14.33999295 0 0 #NAME? 0.025198482 0.081725827 Down 7.044334 1.214676 1.127383 1.66E-32 3.12E-31 1.02E-38 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24359_c0_g1_i4 1938.061504 2728.208362 1147.914646 0.420757689 -1.248938459 3.84E-57 5.08E-55 Down 58.66721 59.53647 61.84786 20.95066 19.88848 20.30319 XP_011098099.1 probable amino acid permease 7 [Sesamum indicum] Q9FF99|AAP7_ARATH Probable amino acid permease 7 OS=Arabidopsis thaliana OX=3702 GN=AAP7 PE=2 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: amino acid transport (GO:0006865);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Molecular Function: symporter activity (GO:0015293);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021); PF01490.17 Transmembrane amino acid transporter protein TRINITY_DN24362_c0_g1_i2 13.43319393 26.86638785 0 0 #NAME? 7.49E-07 7.32E-06 Down 1.917615 3.707636 1.463917 5.50E-19 1.49E-80 4.04E-21 PIN20788.1 hypothetical protein CDL12_06512 [Handroanthus impetiginosus] -- -- sind:105178079 K15340 "DCLRE1A, SNM1A, PSO2" DNA cross-link repair 1A protein -- -- KOG1361 Predicted hydrolase involved in interstrand cross-link repair [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " J COG1236 cleavage and polyadenylation -- -- -- TRINITY_DN24362_c0_g2_i7 30.51103912 43.56707358 17.45500465 0.400646709 -1.319597469 0.00557209 0.023243325 Down 2.790159 1.886567 2.357966 0.8771663 0.6633729 0.721934 XP_022857222.1 uncharacterized protein LOC111378279 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- "PF03732.16,PF08284.10" Retrotransposon gag protein|Retroviral aspartyl protease TRINITY_DN24363_c0_g3_i1 31.03063018 43.88424255 18.17701781 0.41420375 -1.271587481 0.011786734 0.043669215 Down 2.465551 1.337443 1.369814 0.7978993 0.427076 0.491423 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24364_c0_g1_i3 18.79237526 27.86254194 9.72220857 0.348934731 -1.518970893 0.013988264 0.05043842 Down 4.287126 3.257913 3.180462 1.536629 0.3049541 1.194341 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24370_c0_g2_i1 21.50455475 36.46250552 6.546603983 0.179543449 -2.477595084 0.024557952 0.080054513 Down 11.68005 7.179109 2.603173 0.9275533 2.254427 5.23E-21 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24376_c0_g4_i1 22.15164939 37.33680544 6.966493339 0.186585147 -2.422093948 4.22E-05 0.000303062 Down 3.176754 2.405087 4.242426 0.5806713 0.7723031 0.1831138 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24381_c0_g1_i4 81.86029852 110.8093489 52.91124812 0.477498051 -1.066433251 0.000266064 0.001608101 Down 2.821908 2.5828 2.26514 1.02146 1.152318 0.7954243 XP_011072926.1 uncharacterized protein LOC105158016 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZUB6 NA -- PF13676.5 TIR domain TRINITY_DN24386_c0_g1_i1 12.56309491 23.21552725 1.910662571 0.082301063 -3.602945125 4.28E-05 0.000307072 Down 2.299838 4.270502 3.011951 0.1812244 1.04E-79 0.4782492 PIN23171.1 hypothetical protein CDL12_04100 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24386_c1_g2_i1 17.1751956 33.19302616 1.15736504 0.034867717 -4.841964287 0.016683833 0.058206842 Down 2.759614 0.9100795 8.06011 3.12E-09 1.14E-18 0.3839201 PIN23171.1 hypothetical protein CDL12_04100 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111ABM NA -- -- -- TRINITY_DN24386_c2_g1_i3 84.16197947 162.8113212 5.512637765 0.033859057 -4.884314406 4.66E-37 3.37E-35 Down 16.33738 13.83486 14.25891 1.176247 2.92E-35 3.44E-26 PIN23171.1 hypothetical protein CDL12_04100 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YP29 NA -- -- -- TRINITY_DN24387_c0_g1_i4 1325.004243 675.1982297 1974.810255 2.92478589 1.548331016 2.48E-53 3.00E-51 Up 38.37579 41.85097 39.41089 99.84229 94.62179 87.66944 XP_011099939.1 centromere protein V [Sesamum indicum] -- -- -- -- -- -- -- -- KOG4192 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S COG3791 Glutathione-dependent formaldehyde-activating Gfa -- PF04828.13 Glutathione-dependent formaldehyde-activating enzyme TRINITY_DN24393_c0_g1_i1 808.529815 326.1466515 1290.912979 3.958075218 1.984799029 5.42E-77 1.04E-74 Up 4.754863 4.621022 4.735184 14.90609 15.28541 14.85669 OTF88012.1 "putative zinc finger, CCHC-type [Helianthus annuus]" Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF07727.13,PF00665.25,PF14223.5,PF13976.5,PF03732.16" Reverse transcriptase (RNA-dependent DNA polymerase)|Integrase core domain|gag-polypeptide of LTR copia-type|GAG-pre-integrase domain|Retrotransposon gag protein TRINITY_DN24397_c1_g2_i1 21.50183252 35.49987612 7.503788933 0.211375074 -2.242122837 0.000203478 0.001263369 Down 6.017651 6.568961 3.741501 0 1.184337 1.653407 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24397_c1_g3_i1 15.30786445 28.00660628 2.609122615 0.09316097 -3.424130525 1.42E-05 0.000111756 Down 5.498534 5.981736 4.197781 0.7933673 0 0.3913511 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24397_c3_g1_i1 41.26886006 75.53466846 7.003051664 0.092713079 -3.43108332 4.18E-13 8.35E-12 Down 11.43455 9.388008 9.65038 0.5580531 1.11737 0.4695599 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN243_c0_g1_i1 5.703293333 10.63500997 0.771576693 0.072550632 -3.78486801 0.018897157 0.06468094 Down 1.262317 3.097593 0.7398961 0 0 0.3245021 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2440_c0_g1_i1 19.37752125 27.54733466 11.20770784 0.406852713 -1.297421484 0.03164231 0.098446838 Down 2.279195 3.458884 2.301081 0.963832 0.5685766 1.108134 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24411_c0_g1_i8 128.4612731 76.71881586 180.2037303 2.34888571 1.231976518 0.000957797 0.005025692 Up 6.723798 5.279859 8.495883 14.28547 15.59208 8.83743 XP_012855560.1 PREDICTED: receptor-like protein kinase ANXUR2 isoform X3 [Erythranthe guttata] Q9FID9|Y5389_ARATH Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana OX=3702 GN=At5g38990 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN24415_c1_g2_i2 7.854455162 13.15216788 2.556742444 0.194397035 -2.362921878 0.020663473 0.069608683 Down 2.018867 2.401085 3.855392 0.6827912 0.4631017 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24416_c0_g1_i23 61.39538387 94.26164265 28.52912509 0.3026589 -1.724235319 5.79E-07 5.76E-06 Down 4.184696 3.920427 3.129373 0.9598703 1.018772 0.7788523 XP_019153897.1 PREDICTED: uncharacterized protein LOC109150424 [Ipomoea nil] -- -- adu:107469336 K07466 "RFA1, RPA1, rpa" replication factor A1 ko03430|ko03030|ko03440|ko03420 Mismatch repair|DNA replication|Homologous recombination|Nucleotide excision repair KOG0851 "Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " -- -- -- -- "PF02721.13,PF08646.9" Domain of unknown function DUF223|Replication factor-A C terminal domain TRINITY_DN2441_c0_g1_i1 9.264643949 16.98613451 1.543153387 0.090847826 -3.460404204 0.000735618 0.00397564 Down 4.411504 1.814258 2.883953 0 0 0.6983192 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24422_c0_g1_i1 657.4935867 929.5857994 385.401374 0.414594731 -1.270226315 3.92E-29 2.14E-27 Down 46.4444 44.66124 41.74816 14.25829 14.22388 15.98083 XP_011098342.1 NAC domain-containing protein 72 [Sesamum indicum] Q93VY3|NAC72_ARATH NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG4111FG3 nac domain "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);" PF02365.14 No apical meristem (NAM) protein TRINITY_DN24423_c0_g3_i1 117.3387427 66.24500015 168.4324852 2.542569022 1.346286939 6.91E-05 0.000474084 Up 4.618402 6.565186 2.807959 8.868141 7.662696 12.17699 EYU25822.1 hypothetical protein MIMGU_mgv1a004003mg [Erythranthe guttata] Q9C9P4|KASC2_ARATH "3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KAS2 PE=1 SV=1" sind:105173713 K09458 fabF 3-oxoacyl-[acyl-carrier-protein] synthase II ko00061|ko00780 Fatty acid biosynthesis|Biotin metabolism KOG1394 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [IQ] METABOLISM|METABOLISM "Lipid transport and metabolism |Secondary metabolites biosynthesis, transport and catabolism " I COG0304 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (By similarity) Molecular Function: 3-oxoacyl-[acyl-carrier-protein] synthase activity (GO:0004315);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid (GO:0009536);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: cold acclimation (GO:0009631);|Biological Process: embryo development ending in seed dormancy (GO:0009793); -- -- TRINITY_DN24427_c0_g3_i1 18.51855828 37.03711655 0 0 #NAME? 2.87E-12 5.32E-11 Down 3.163917 1.775291 3.048916 1.23E-26 2.81E-61 2.57E-12 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24432_c0_g1_i1 15.82006869 22.73697104 8.903166337 0.391572225 -1.35264966 0.045031203 0.130355296 Down 1.906431 3.334342 2.301168 0.3786466 1.148049 0.8302368 EYU24950.1 hypothetical protein MIMGU_mgv1a000409mg [Erythranthe guttata] Q9C5Y4|SMC21_ARATH Structural maintenance of chromosomes protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=SMC2-1 PE=2 SV=2 -- -- -- -- -- -- KOG0933 "Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E)" [BD] INFORMATION STORAGE AND PROCESSING|CELLULAR PROCESSES AND SIGNALING "Chromatin structure and dynamics |Cell cycle control, cell division, chromosome partitioning " D COG1196 Required for chromosome condensation and partitioning (By similarity) Cellular Component: condensin complex (GO:0000796);|Molecular Function: transporter activity (GO:0005215);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: chromosome condensation (GO:0030261);|Biological Process: cell division (GO:0051301);|Biological Process: meiotic cell cycle (GO:0051321); "PF02463.18,PF13476.5,PF13175.5" RecF/RecN/SMC N terminal domain|AAA domain|AAA ATPase domain TRINITY_DN24440_c0_g1_i9 2349.780345 966.9366181 3732.624073 3.860257232 1.948696986 1.61E-143 6.66E-141 Up 22.84213 23.80923 22.97301 75.03122 72.21134 69.59981 XP_011090797.1 protein DOWNY MILDEW RESISTANCE 6-like [Sesamum indicum] Q9FLV0|DMR6_ARATH Protein DOWNY MILDEW RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=DMR6 PE=1 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: defense response to oomycetes (GO:0002229);|Biological Process: response to oomycetes (GO:0002239);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to fungus (GO:0009620);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: flavonoid biosynthetic process (GO:0009813);|Biological Process: leaf senescence (GO:0010150);|Molecular Function: flavone synthase activity (GO:0033759);|Molecular Function: salicylate 5-hydroxylase activity (GO:0034785);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: salicylic acid catabolic process (GO:0046244);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213); "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN24445_c1_g1_i1 158.2938881 91.89503 224.6927463 2.445102268 1.289894808 4.67E-10 6.92E-09 Up 2.285639 2.714458 2.08703 4.571836 4.764412 4.629846 PIN12728.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q0JEU6|LERK3_ORYSJ G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK3 PE=3 SV=2 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: carbohydrate binding (GO:0030246); "PF07714.16,PF00069.24,PF01453.23" Protein tyrosine kinase|Protein kinase domain|D-mannose binding lectin TRINITY_DN24451_c0_g1_i1 116.0451272 66.44078747 165.6494669 2.493189397 1.317992483 3.78E-08 4.43E-07 Up 2.426675 2.536855 2.098765 4.933479 5.140911 4.12399 PIN25721.1 Multicopper oxidase [Handroanthus impetiginosus] Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus OX=3708 GN=Bp10 PE=2 SV=1 -- -- -- -- -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase Molecular Function: copper ion binding (GO:0005507);|Cellular Component: extracellular region (GO:0005576);|Molecular Function: oxidoreductase activity (GO:0016491); "PF00394.21,PF07732.14,PF07731.13" Multicopper oxidase|Multicopper oxidase|Multicopper oxidase TRINITY_DN24451_c0_g2_i1 6.815875414 2.093092132 11.5386587 5.512733301 2.462767807 0.023487364 0.077157469 Up 0.4295648 0.207609 0.1610678 1.566655 0.7641696 1.247848 PIN25721.1 Multicopper oxidase [Handroanthus impetiginosus] Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus OX=3708 GN=Bp10 PE=2 SV=1 -- -- -- -- -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase Molecular Function: copper ion binding (GO:0005507);|Cellular Component: extracellular region (GO:0005576);|Molecular Function: oxidoreductase activity (GO:0016491); -- -- TRINITY_DN24452_c0_g1_i6 70.79091393 132.3318888 9.249939043 0.069899547 -3.83857309 1.37E-24 5.82E-23 Down 10.04353 11.38511 10.06364 0.6937791 0.6358071 0.461407 KVH89684.1 Homeodomain-like protein [Cynara cardunculus var. scolymus] Q10MB4|MYB2_ORYSJ Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1 mus:103985922 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein "Cellular Component: nucleus (GO:0005634);|Biological Process: response to cold (GO:0009409);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: response to salicylic acid (GO:0009751);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: response to cadmium ion (GO:0046686);|Biological Process: positive regulation of response to salt stress (GO:1901002);|Biological Process: positive regulation of response to water deprivation (GO:1902584);" -- -- TRINITY_DN24452_c0_g2_i1 3.929146452 0 7.858292904 Inf Inf 0.002781409 0.012814015 Up 0 0 0 0.4168293 1.240785 1.733935 EXB94377.1 Myb-related protein 305 [Morus notabilis] Q9FGY3|MYB78_ARATH Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=2 SV=1 gra:105776584 K09422 MYBP "transcription factor MYB, plant" -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: response to salt (GO:1902074); "PF00249.30,PF13921.5" Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN24454_c1_g1_i1 9.77315675 2.120135906 17.42617759 8.219368177 3.039027498 0.001016944 0.005300508 Up 0.8902422 0 0.3477727 3.103807 2.763442 2.333588 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24454_c2_g1_i1 7.20878448 14.41756896 0 0 #NAME? 4.76E-05 0.000339184 Down 3.214127 3.474041 1.697828 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24455_c0_g1_i1 127.7339684 84.34994964 171.1179871 2.02866733 1.020532305 1.22E-05 9.76E-05 Up 4.643044 4.689526 5.858924 7.610353 9.090868 8.097732 PIN23506.1 AAA+-type ATPase [Handroanthus impetiginosus] Q9P7J5|YJNA_SCHPO Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC24B10.10c PE=3 SV=1 sind:105160217 K17681 ATAD3A_B ATPase family AAA domain-containing protein 3A/B -- -- KOG0742 AAA+-type ATPase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " S COG1223 "ATPase family, AAA" Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial outer membrane (GO:0005741);|Molecular Function: ATPase activity (GO:0016887);|Biological Process: protein import into mitochondrial intermembrane space (GO:0045041); "PF00004.28,PF12037.7,PF13191.5" ATPase family associated with various cellular activities (AAA)|Domain of unknown function (DUF3523)|AAA ATPase domain TRINITY_DN24455_c1_g3_i1 8.150707301 14.75826121 1.543153387 0.104562005 -3.257569381 0.002828198 0.013000546 Down 4.087631 2.00759 1.608691 0 0 0.6979458 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24473_c0_g1_i1 200.6271323 121.5678952 279.6863693 2.300659799 1.202047667 1.16E-10 1.84E-09 Up 3.368388 2.884816 3.292627 6.145352 6.137251 5.451067 XP_020548932.1 ferric reduction oxidase 4 [Sesamum indicum] Q8W110|FRO4_ARATH Ferric reduction oxidase 4 OS=Arabidopsis thaliana OX=3702 GN=FRO4 PE=2 SV=1 -- -- -- -- -- -- KOG0039 "Ferric reductase, NADH/NADPH oxidase and related proteins" [PQ] METABOLISM|METABOLISM "Inorganic ion transport and metabolism |Secondary metabolites biosynthesis, transport and catabolism " U ENOG410XNZY NADPH Oxidase Molecular Function: ferric-chelate reductase activity (GO:0000293);|Biological Process: ion transport (GO:0006811);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872); "PF08030.11,PF08022.11,PF01794.18,PF00175.20" Ferric reductase NAD binding domain|FAD-binding domain|Ferric reductase like transmembrane component|Oxidoreductase NAD-binding domain TRINITY_DN24475_c3_g6_i1 48.31210727 94.02563983 2.598574717 0.027636874 -5.177261772 4.49E-21 1.59E-19 Down 11.00089 6.891732 8.798458 0.2459158 0.1671098 0.2211161 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24478_c0_g1_i1 9.252873861 4.384336155 14.12141157 3.220877932 1.687453985 0.046570205 0.133888233 Up 0.6571874 0.7967094 0.1270446 1.406386 1.245622 1.295043 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24478_c1_g2_i7 44.40474015 88.44197112 0.367509184 0.004155371 -7.910807064 5.75E-07 5.73E-06 Down 5.125172 11.24376 3.865385 0.07748888 5.60E-34 3.09E-50 XP_011079411.1 "leucine aminopeptidase 2, chloroplastic [Sesamum indicum]" Q42876|AMPL2_SOLLC "Leucine aminopeptidase 2, chloroplastic OS=Solanum lycopersicum OX=4081 GN=LAPA2 PE=2 SV=1" sind:105162933 K01255 "CARP, pepA" leucyl aminopeptidase ko00480 Glutathione metabolism KOG2597 Predicted aminopeptidase of the M17 family [R] POORLY CHARACTERIZED General function prediction only E COG0260 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity) Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: aminopeptidase activity (GO:0004177);|Molecular Function: metalloexopeptidase activity (GO:0008235);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: manganese ion binding (GO:0030145); -- -- TRINITY_DN24478_c1_g3_i1 12.16400925 24.32801851 0 0 #NAME? 2.44E-05 0.000183328 Down 7.018931 2.511533 2.842739 1.04E-61 2.50E-38 2.85E-52 -- -- Q944P7|AMPL2_ARATH "Leucine aminopeptidase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LAP2 PE=2 SV=2" sind:105162933 K01255 "CARP, pepA" leucyl aminopeptidase ko00480 Glutathione metabolism -- -- -- -- -- -- -- -- Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: aminopeptidase activity (GO:0004177);|Cellular Component: vacuole (GO:0005773);|Cellular Component: cytosol (GO:0005829);|Molecular Function: metalloexopeptidase activity (GO:0008235);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: leaf senescence (GO:0010150);|Molecular Function: manganese ion binding (GO:0030145); -- -- TRINITY_DN24484_c0_g4_i1 12.30746128 6.424899543 18.19002302 2.831176254 1.501401567 0.039320231 0.11702879 Up 1.34038 0.9032223 0.4299083 2.629016 1.751649 1.839111 XP_022850663.1 uncharacterized protein LOC111372546 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24494_c0_g1_i1 190.5180074 285.6009342 95.43508066 0.334155352 -1.581409114 8.60E-16 2.11E-14 Down 14.17286 13.23445 12.69692 3.74167 3.537462 3.522101 XP_020549820.1 alcohol dehydrogenase-like 1 [Sesamum indicum] Q0V7W6|ADHL5_ARATH Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana OX=3702 GN=At4g22110 PE=2 SV=1 sind:105164765 K00121 "frmA, ADH5, adhC" S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase ko00071|ko00350|ko00010 Fatty acid degradation|Tyrosine metabolism|Glycolysis / Gluconeogenesis KOG0022 "Alcohol dehydrogenase, class III" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " C COG1062 alcohol dehydrogenase Molecular Function: alcohol dehydrogenase (NAD) activity (GO:0004022);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: zinc ion binding (GO:0008270); "PF08240.11,PF00107.25" Alcohol dehydrogenase GroES-like domain|Zinc-binding dehydrogenase TRINITY_DN24495_c0_g1_i1 240.3403636 156.7791701 323.9015572 2.065973158 1.04682151 9.29E-10 1.32E-08 Up 6.85569 7.796792 7.093322 12.62881 11.01337 12.55991 AAS77404.1 quercetin 3-O-glucoside-6''-O-malonyltransferase [Lamium purpureum] Q8W1W9|5MAT1_SALSN Malonyl-coenzyme:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase OS=Salvia splendens OX=180675 GN=5MAT1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZBAM Anthocyanin 5-aromatic Biological Process: phenylpropanoid metabolic process (GO:0009698);|Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);|Molecular Function: anthocyanin 5-O-glucoside 6'''-O-malonyltransferase activity (GO:0033810); PF02458.14 Transferase family TRINITY_DN24495_c0_g3_i1 67.26571244 15.26962388 119.261801 7.810395457 2.965395597 9.23E-18 2.62E-16 Up 3.406764 3.41219 2.702632 16.04779 22.76045 21.03369 AAS77404.1 quercetin 3-O-glucoside-6''-O-malonyltransferase [Lamium purpureum] Q8W1W9|5MAT1_SALSN Malonyl-coenzyme:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase OS=Salvia splendens OX=180675 GN=5MAT1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Biological Process: phenylpropanoid metabolic process (GO:0009698);|Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);|Molecular Function: anthocyanin 5-O-glucoside 6'''-O-malonyltransferase activity (GO:0033810); PF02458.14 Transferase family TRINITY_DN24499_c0_g1_i1 37.98851478 56.59062587 19.3864037 0.342572704 -1.545517894 0.000342112 0.002017082 Down 3.282963 4.393827 3.069153 0.8253157 0.9254475 1.181871 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24499_c0_g2_i1 9.102662875 15.1661252 3.039200551 0.200394004 -2.319088754 0.016532694 0.057826211 Down 3.702443 0.9870262 2.380504 1.27E-92 0.3026448 0.9553698 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN244_c1_g1_i1 8.498522333 13.65044637 3.3465983 0.24516402 -2.028180831 0.03377624 0.103859143 Down 2.315459 1.795105 2.865597 0.4852083 0.4873194 0.503297 XP_022845302.1 berberine bridge enzyme-like 8 [Olea europaea var. sylvestris] Q9LPC3|BBE1_ARATH Berberine bridge enzyme-like 1 OS=Arabidopsis thaliana OX=3702 GN=SEC1A PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein "Cellular Component: extracellular region (GO:0005576);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plant-type cell wall (GO:0009505);|Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor (GO:0016899);|Molecular Function: FAD binding (GO:0071949);" -- -- TRINITY_DN24500_c1_g1_i1 13.06990023 21.79297764 4.346822826 0.199459794 -2.325830131 0.005269463 0.022151948 Down 4.971296 2.462122 5.736905 0 2.078988 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24500_c2_g1_i1 255.256892 371.8008973 138.7128866 0.373083787 -1.42242843 5.09E-17 1.37E-15 Down 61.8605 59.14513 67.27325 24.01544 18.87454 13.71403 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24500_c3_g5_i1 30.00923815 45.45889621 14.55958009 0.320280106 -1.642593907 0.000678402 0.003700842 Down 3.828777 3.830603 3.921073 1.09955 0.6840452 1.243611 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24500_c3_g6_i1 30.05012672 57.13171221 2.968541218 0.051959605 -4.266465718 1.19E-12 2.29E-11 Down 5.249053 7.988769 6.880978 9.57E-85 0.4644519 0.3250869 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24501_c0_g1_i1 7.973165989 15.94633198 0 0 #NAME? 1.47E-05 0.000115812 Down 3.339264 4.28367 2.609801 0 0 0 XP_011620466.1 uncharacterized protein LOC105420045 [Amborella trichopoda] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN24501_c2_g6_i1 79.41251069 36.74051045 122.0845109 3.322885541 1.732436599 4.67E-08 5.40E-07 Up 6.10915 4.33224 4.28179 11.23828 11.49977 16.85972 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24509_c0_g1_i3 3312.651489 1965.306083 4659.996895 2.371130346 1.245574973 1.57E-73 2.84E-71 Up 61.60832 58.67957 55.88264 108.9519 115.0908 113.0089 XP_011094389.1 IQ domain-containing protein IQM3-like isoform X2 [Sesamum indicum] Q9LFA4|IQM3_ARATH IQ domain-containing protein IQM3 OS=Arabidopsis thaliana OX=3702 GN=IQM3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XYBD NA Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737); -- -- TRINITY_DN24513_c0_g3_i2 25.0780593 41.58636043 8.569758162 0.206071367 -2.278784031 3.51E-05 0.000256941 Down 2.346015 1.969258 2.355567 0.2469816 0.4032653 0.452361 PIN16400.1 Iron/ascorbate family oxidoreductase [Handroanthus impetiginosus] O04847|DV4H_CATRO Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus OX=4058 GN=D4H PE=1 SV=2 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: alkaloid metabolic process (GO:0009820);|Molecular Function: L-ascorbic acid binding (GO:0031418);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: desacetoxyvindoline 4-hydroxylase activity (GO:0050590); "PF03171.19,PF14226.5" 2OG-Fe(II) oxygenase superfamily|non-haem dioxygenase in morphine synthesis N-terminal TRINITY_DN24513_c2_g1_i1 16.28570169 32.57140338 0 0 #NAME? 0.000889602 0.004706491 Down 12.3652 1.866394 5.179824 0 0 0 XP_010274804.1 PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog isoform X2 [Nelumbo nucifera] Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g06620 PE=2 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN24515_c0_g1_i5 188.3863761 81.22369307 295.5490591 3.638705012 1.863425097 4.63E-21 1.64E-19 Up 2.587843 2.478023 2.681641 8.097411 6.931913 7.771731 XP_009122366.1 PREDICTED: clathrin heavy chain 1-like [Brassica rapa] Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1 OS=Arabidopsis thaliana OX=3702 GN=CHC1 PE=1 SV=1 brp:103847080 K04646 CLTC clathrin heavy chain ko04144 Endocytosis KOG0985 "Vesicle coat protein clathrin, heavy chain" [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U ENOG410XPH1 clathrin heavy chain Molecular Function: structural molecule activity (GO:0005198);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: intracellular protein transport (GO:0006886);|Biological Process: endocytosis (GO:0006897);|Biological Process: receptor-mediated endocytosis (GO:0006898);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: chloroplast (GO:0009507);|Biological Process: stomatal movement (GO:0010118);|Biological Process: vesicle-mediated transport (GO:0016192);|Cellular Component: clathrin coat of trans-Golgi network vesicle (GO:0030130);|Cellular Component: clathrin coat of coated pit (GO:0030132);|Molecular Function: clathrin light chain binding (GO:0032051);|Molecular Function: identical protein binding (GO:0042802);|Biological Process: clathrin coat assembly (GO:0048268);|Cellular Component: clathrin complex (GO:0071439);|Biological Process: clathrin-dependent endocytosis (GO:0072583); -- -- TRINITY_DN24520_c0_g1_i8 227.2899425 315.7412868 138.8385982 0.439722659 -1.185334217 1.24E-11 2.18E-10 Down 10.77361 12.53574 12.9899 3.858715 3.660162 5.394786 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24522_c0_g3_i1 13.22121894 21.71228402 4.730153857 0.217856116 -2.198552482 0.005020406 0.021272405 Down 4.652417 1.695752 3.619094 0.5894482 1.160669 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24528_c0_g2_i1 14.04510756 24.830098 3.26011712 0.13129699 -2.929094256 0.003892651 0.017074804 Down 6.844219 1.983135 5.294144 0 1.457133 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24538_c0_g1_i1 9.543055217 19.08611043 0 0 #NAME? 1.16E-06 1.10E-05 Down 2.602913 3.694826 5.098705 0 0 0 -- -- Q49SP3|TPSPS_POGCB Patchoulol synthase OS=Pogostemon cablin OX=28511 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: terpene synthase activity (GO:0010333);|Biological Process: terpenoid biosynthetic process (GO:0016114); -- -- TRINITY_DN24538_c1_g1_i1 45.20819678 84.55242778 5.863965786 0.069353015 -3.849897589 2.49E-10 3.80E-09 Down 3.946641 6.053369 3.34302 0.1703556 0.4463443 0.1185975 AAS86322.1 germacrene D synthase [Pogostemon cablin] Q49SP4|TPGD1_POGCB Germacrene D synthase 1 OS=Pogostemon cablin OX=28511 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: cytosol (GO:0005829);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate metabolic process (GO:0045338);|Biological Process: sesquiterpene biosynthetic process (GO:0051762); -- -- TRINITY_DN24538_c2_g3_i1 65.99190053 91.13635 40.84745106 0.448201525 -1.157780537 0.000264141 0.001597332 Down 2.723987 3.56406 3.532176 1.502856 0.973688 1.090209 Q49SP6.1 RecName: Full=Germacrene D synthase 2; AltName: Full=PatTpsBF2 Q49SP6|TPGD2_POGCB Germacrene D synthase 2 OS=Pogostemon cablin OX=28511 PE=1 SV=1 vvi:100232954 K15803 GERD (-)-germacrene D synthase ko00909 Sesquiterpenoid and triterpenoid biosynthesis -- -- -- -- -- S ENOG410YBXH synthase Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: cytosol (GO:0005829);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate metabolic process (GO:0045338);|Biological Process: sesquiterpene biosynthetic process (GO:0051762); "PF03936.15,PF01397.20" "Terpene synthase family, metal binding domain|Terpene synthase, N-terminal domain" TRINITY_DN24538_c2_g4_i1 16.65520545 27.28157333 6.028837564 0.220985699 -2.177975083 0.001238755 0.006315228 Down 1.725911 3.481996 2.343639 0.3371465 0.2211339 0.8232183 Q49SP4.1 RecName: Full=Germacrene D synthase 1; AltName: Full=PatTpsB15 Q49SP4|TPGD1_POGCB Germacrene D synthase 1 OS=Pogostemon cablin OX=28511 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBXH synthase Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: cytosol (GO:0005829);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate metabolic process (GO:0045338);|Biological Process: sesquiterpene biosynthetic process (GO:0051762); PF01397.20 "Terpene synthase, N-terminal domain" TRINITY_DN24546_c0_g2_i1 71.27390779 118.0739374 24.47387816 0.207275871 -2.270375916 4.22E-12 7.72E-11 Down 2.509729 1.751084 2.110609 0.4243127 0.329126 0.3003361 XP_011093261.1 uncharacterized protein LOC105173270 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZJGG Transposon protein -- "PF10551.8,PF00872.17" "MULE transposase domain|Transposase, Mutator family" TRINITY_DN24554_c0_g1_i8 815.3382624 1456.768679 173.9078461 0.119379177 -3.066376881 1.25E-154 5.96E-152 Down 43.19786 40.76935 38.95694 3.514999 3.407829 4.936466 KZV47481.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Dorcoceras hygrometricum] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); "PF14372.5,PF05699.13" Domain of unknown function (DUF4413)|hAT family C-terminal dimerisation region TRINITY_DN24554_c1_g1_i1 184.6218853 367.7737338 1.470036737 0.003997123 -7.966822427 5.84E-30 3.27E-28 Down 92.98257 78.97227 53.72634 0.6552451 0 1.89E-42 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24559_c0_g2_i5 81.84896405 148.4272421 15.27068603 0.10288331 -3.280919125 2.34E-23 9.36E-22 Down 9.602433 10.03535 11.17767 0.5127417 1.050967 1.083108 XP_012857419.1 PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like [Erythranthe guttata] O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1 -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN24560_c0_g2_i1 23.44424016 34.82432394 12.06415638 0.346429019 -1.529368311 0.026400855 0.08491561 Down 3.497139 1.34433 2.596328 0.7305737 1.158612 0.1327311 PIN19742.1 Alpha-farnesene synthase [Handroanthus impetiginosus] Q93YV0|GES_ARATH "(E,E)-geranyllinalool synthase OS=Arabidopsis thaliana OX=3702 GN=GES PE=1 SV=1" vvi:100264943 K17982 "TPS04, GES" geranyllinalool synthase ko00904 Diterpenoid biosynthesis -- -- -- -- -- S ENOG410YDYM "(E,E)-geranyllinalool" "Molecular Function: magnesium ion binding (GO:0000287);|Biological Process: response to singlet oxygen (GO:0000304);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to jasmonic acid (GO:0009753);|Molecular Function: terpene synthase activity (GO:0010333);|Biological Process: diterpenoid biosynthetic process (GO:0016102);|Molecular Function: (E,E)-geranyllinalool synthase activity (GO:0080013);|Biological Process: response to herbivore (GO:0080027);" PF03936.15 "Terpene synthase family, metal binding domain" TRINITY_DN24561_c0_g2_i1 4.626294162 9.252588324 0 0 #NAME? 0.001479162 0.007384909 Down 1.148439 0.7535862 2.878056 1.76E-18 1.56E-72 5.04E-41 XP_012846482.1 PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24564_c1_g2_i1 12.54616692 3.216671069 21.87566276 6.800714868 2.765686406 0.007245656 0.029072932 Up 6.90E-17 0.5310213 0.9360995 4.458526 1.599989 1.967118 ALM25795.1 cytochrome P450 76A35-like protein [Salvia pomifera] P37121|C76A1_SOLME Cytochrome P450 76A1 (Fragment) OS=Solanum melongena OX=4111 GN=CYP76A1 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN2456_c0_g1_i1 10.80766792 4.199706151 17.4156297 4.146868631 2.052022345 0.012008322 0.044352625 Up 0.6229113 0.2416691 0.2879499 1.313639 1.411452 1.140432 PIN10457.1 hypothetical protein CDL12_16952 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN24570_c0_g1_i3 117.9152644 168.3751631 67.45536568 0.400625392 -1.319674233 4.67E-08 5.40E-07 Down 6.645287 5.36796 6.946123 2.358691 2.016275 1.739483 AHK06498.1 "geraniol 10-hydroxylase, partial [Pogostemon cablin]" D1MI46|C76BA_SWEMU Geraniol 8-hydroxylase OS=Swertia mussotii OX=137888 GN=CYP76B10 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: monoterpenoid biosynthetic process (GO:0016099);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN24571_c0_g4_i2 28.15494917 41.0051113 15.30478703 0.373240958 -1.421820783 0.011987044 0.044288449 Down 4.262985 5.447178 2.173379 0.8986677 1.220955 1.565057 OVA00446.1 Mitochondrial carrier protein [Macleaya cordata] P29518|BT1_MAIZE "Adenine nucleotide transporter BT1, chloroplastic/amyloplastic/mitochondrial OS=Zea mays OX=4577 GN=BT1 PE=1 SV=1" -- -- -- -- -- -- KOG0752 Mitochondrial solute carrier protein [C] METABOLISM Energy production and conversion S ENOG410ZRF1 Solute carrier family 25 Cellular Component: mitochondrial inner membrane (GO:0005743);|Cellular Component: chloroplast inner membrane (GO:0009706);|Biological Process: ADP transport (GO:0015866);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857);|Cellular Component: amyloplast inner membrane (GO:0033098);|Biological Process: purine nucleotide-sugar transmembrane transport (GO:0090480); -- -- TRINITY_DN24571_c0_g5_i1 14.74508103 29.49016205 0 0 #NAME? 7.25E-10 1.05E-08 Down 2.02989 2.474789 2.33958 0 0 0 XP_011095068.1 protein trichome birefringence-like 34 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111KEV thaumatin-like protein -- -- -- TRINITY_DN24580_c0_g1_i3 38.50292526 52.07306735 24.93278316 0.478803812 -1.062493456 0.012414898 0.045594617 Down 2.427095 2.757517 1.986064 0.9306014 0.848439 0.996346 XP_012837771.1 PREDICTED: uncharacterized protein LOC105958305 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDIX Core-2/I-Branching enzyme -- PF02485.20 Core-2/I-Branching enzyme TRINITY_DN24583_c1_g1_i2 15.60944401 23.41015865 7.808729366 0.333561574 -1.583974994 0.017278731 0.059913943 Down 1.763315 4.902398 4.829483 1.021725 1.061822 1.158894 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24583_c2_g4_i1 18.34209035 36.6841807 0 0 #NAME? 8.43E-08 9.39E-07 Down 4.491152 2.724475 1.685013 1.39E-41 1.54E-66 4.64E-51 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24596_c2_g1_i1 113.6989266 173.4784194 53.91943388 0.310813495 -1.685878949 3.72E-09 4.96E-08 Down 30.82512 31.61384 24.47632 11.35175 3.783668 6.709502 XP_011069583.1 "DNA-directed RNA polymerase 3, chloroplastic [Sesamum indicum]" P69243|RPO3A_TOBAC "DNA-directed RNA polymerase 3A, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPOT3-SYL PE=3 SV=1" sind:105155408 K10908 "POLRMT, RPO41" "DNA-directed RNA polymerase, mitochondrial" -- -- KOG1038 "Mitochondrial/chloroplast DNA-directed RNA polymerase RPO41, provides primers for DNA replication-initiation" [KL] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING "Transcription |Replication, recombination and repair " K COG5108 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity) "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-directed 5'-3' RNA polymerase activity (GO:0003899);|Biological Process: transcription, DNA-templated (GO:0006351);|Cellular Component: chloroplast (GO:0009507);" -- -- TRINITY_DN24609_c0_g2_i1 14.44038304 20.98837217 7.892393913 0.376036495 -1.411055409 0.034502894 0.105602446 Down 1.185565 1.723908 3.112056 0.4060021 0.4040072 1.050665 OIS95999.1 wat1-related protein [Nicotiana attenuata] Q9ZUI8|WTR9_ARATH WAT1-related protein At1g60050 OS=Arabidopsis thaliana OX=3702 GN=At1g60050 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41117F8 Nodulin MtN21 family protein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); -- -- TRINITY_DN24609_c1_g1_i1 50.59500414 84.0005691 17.18943918 0.204634794 -2.288876626 8.44E-08 9.40E-07 Down 14.60783 9.166664 9.555734 1.722129 1.415484 2.350397 XP_011071064.1 WAT1-related protein At1g70260 [Sesamum indicum] F4I5D5|WTR11_ARATH WAT1-related protein At1g70260 OS=Arabidopsis thaliana OX=3702 GN=At1g70260 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41117F8 Nodulin MtN21 family protein Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857);|Biological Process: regulation of defense response to fungus (GO:1900150);|Biological Process: negative regulation of defense response to bacterium (GO:1900425);|Biological Process: negative regulation of defense response to oomycetes (GO:1902289); -- -- TRINITY_DN24609_c1_g2_i8 172.887118 248.8422602 96.93197581 0.389531809 -1.360186952 2.62E-11 4.46E-10 Down 15.09268 14.49808 14.23256 4.392992 5.619412 3.715564 XP_011071064.1 WAT1-related protein At1g70260 [Sesamum indicum] F4I5D5|WTR11_ARATH WAT1-related protein At1g70260 OS=Arabidopsis thaliana OX=3702 GN=At1g70260 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41117F8 Nodulin MtN21 family protein Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857);|Biological Process: regulation of defense response to fungus (GO:1900150);|Biological Process: negative regulation of defense response to bacterium (GO:1900425);|Biological Process: negative regulation of defense response to oomycetes (GO:1902289); PF00892.19 EamA-like transporter family TRINITY_DN24614_c0_g1_i3 122.9185813 239.8867157 5.950446966 0.024805238 -5.333211417 3.37E-57 4.48E-55 Down 16.85499 14.80398 15.04999 0.4045632 0.2229557 0.3074914 PIN11188.1 hypothetical protein CDL12_16219 [Handroanthus impetiginosus] Q6Z8K4|MUB3_ORYSJ Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG4111627 membrane-anchored ubiquitin-fold protein 3-like Cellular Component: plasma membrane (GO:0005886); "PF13881.5,PF00240.22" Ubiquitin-2 like Rad60 SUMO-like|Ubiquitin family TRINITY_DN24616_c0_g1_i2 60.3721673 86.74597063 33.99836396 0.391930181 -1.351331422 6.92E-05 0.000474961 Down 3.929243 4.025067 3.128536 1.167984 0.8659252 1.473809 XP_011096068.1 uncharacterized protein LOC105175347 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24634_c0_g2_i1 7.362367302 13.20513433 1.519600276 0.115076472 -3.119335193 0.005924227 0.024500587 Down 1.779294 0.5456436 1.100375 0 0.1026516 0.222248 AAF18630.1 F5J5.1 [Arabidopsis thaliana] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN24634_c0_g4_i3 384.3358516 527.2048091 241.4668941 0.458013451 -1.126538126 8.38E-16 2.06E-14 Down 5.021382 4.99805 4.788528 1.550516 1.759069 2.162519 XP_024950463.1 LOW QUALITY PROTEIN: uncharacterized protein LOC112497155 [Citrus sinensis] P92516|M750_ARATH Uncharacterized mitochondrial protein AtMg00750 OS=Arabidopsis thaliana OX=3702 GN=AtMg00750 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YQZ5 Retro-transposon Cellular Component: mitochondrion (GO:0005739); PF03732.16 Retrotransposon gag protein TRINITY_DN24638_c0_g1_i2 50.50583589 73.27731718 27.7343546 0.378484853 -1.401692531 0.000192132 0.001198331 Down 6.105166 10.38177 8.470145 3.593344 2.311805 1.724702 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24641_c0_g1_i3 148.4889071 76.99005936 219.9877549 2.857352711 1.514679133 2.73E-12 5.07E-11 Up 7.140079 5.772734 6.007036 14.43473 13.1593 15.95426 XP_011072384.1 protein PLANT CADMIUM RESISTANCE 8-like [Sesamum indicum] Q9M815|PCR8_ARATH Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana OX=3702 GN=PCR8 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- U ENOG410YMMC Protein PLANT CADMIUM RESISTANCE Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: integral component of membrane (GO:0016021); PF04749.16 PLAC8 family TRINITY_DN24649_c2_g1_i1 104.2475128 176.5011773 31.99384826 0.181267053 -2.463811369 4.40E-19 1.36E-17 Down 23.90164 22.91133 20.66561 4.330538 2.213152 3.319311 XP_015088609.1 "PREDICTED: probable envelope ADP,ATP carrier protein, chloroplastic [Solanum pennellii]" Q9M024|TAAC_ARATH "Thylakoid ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TAAC PE=1 SV=1" spen:107031678 K14684 SLC25A23S "solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41" -- -- KOG0752 Mitochondrial solute carrier protein [C] METABOLISM Energy production and conversion S ENOG410ZRF1 Solute carrier family 25 Molecular Function: ATP transmembrane transporter activity (GO:0005347);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid envelope (GO:0009526);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: plastid (GO:0009536);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: photoprotection (GO:0010117);|Biological Process: photosystem II repair (GO:0010206);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: thylakoid membrane (GO:0042651); -- -- TRINITY_DN24649_c2_g2_i4 2256.693084 3399.739388 1113.646779 0.327568279 -1.61013244 2.14E-98 5.23E-96 Down 71.0606 69.81242 72.9128 18.90682 19.41047 18.18389 PIN20584.1 hypothetical protein CDL12_06727 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YJ5A Agenet domain -- -- -- TRINITY_DN24649_c2_g3_i1 152.1270772 84.66487641 219.5892779 2.59362899 1.374972122 7.52E-11 1.21E-09 Up 13.62549 10.17115 10.32474 26.20259 23.64992 21.59569 XP_011095004.1 "probable envelope ADP,ATP carrier protein, chloroplastic [Sesamum indicum]" O65023|EAAC_ARATH "Probable envelope ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EAAC PE=2 SV=2" sind:105174558 K14684 SLC25A23S "solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41" -- -- KOG0752 Mitochondrial solute carrier protein [C] METABOLISM Energy production and conversion S ENOG410ZRF1 Solute carrier family 25 Molecular Function: ATP transmembrane transporter activity (GO:0005347);|Cellular Component: chloroplast (GO:0009507);|Biological Process: response to nematode (GO:0009624);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: chloroplast membrane (GO:0031969);|Cellular Component: thylakoid membrane (GO:0042651); PF00153.26 Mitochondrial carrier protein TRINITY_DN24656_c0_g1_i1 23.80071072 32.27308129 15.32834015 0.474957442 -1.074129845 0.037698316 0.113117375 Down 3.664723 2.387718 4.627209 0.9869463 1.264399 1.93438 XP_022872840.1 rust resistance kinase Lr10-like [Olea europaea var. sylvestris] Q9FF29|PR5K_ARATH PR5-like receptor kinase OS=Arabidopsis thaliana OX=3702 GN=PR5K PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to fungus (GO:0009620);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN24656_c1_g1_i2 75.67720976 41.77719083 109.5772287 2.622896048 1.391160631 2.85E-06 2.54E-05 Up 2.253576 1.887415 1.892384 4.258828 4.277822 4.24679 XP_022844096.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 [Olea europaea var. sylvestris] P93604|LRK10_WHEAT Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); PF13947.5 Wall-associated receptor kinase galacturonan-binding TRINITY_DN24656_c1_g2_i1 47.04265244 31.18467338 62.9006315 2.017036726 1.012237353 0.005650862 0.023522198 Up 2.225218 3.923342 1.479014 5.015243 3.123527 4.34218 PIN08506.1 Serine/threonine protein kinase [Handroanthus impetiginosus] P93604|LRK10_WHEAT Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN24656_c2_g1_i6 368.8077695 217.4935546 520.1219845 2.391436314 1.257877372 8.18E-19 2.47E-17 Up 7.302452 5.081486 6.02707 12.27526 10.64379 12.6306 XP_022844096.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 [Olea europaea var. sylvestris] P93604|LRK10_WHEAT Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); "PF00069.24,PF07714.16,PF13947.5" Protein kinase domain|Protein tyrosine kinase|Wall-associated receptor kinase galacturonan-binding TRINITY_DN24656_c2_g4_i1 58.14274757 82.8377913 33.44770383 0.403773487 -1.308381913 0.000119402 0.000778623 Down 3.663514 4.262529 4.461041 1.368989 1.311818 1.358213 XP_022844096.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 [Olea europaea var. sylvestris] P93604|LRK10_WHEAT Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); "PF13947.5,PF07714.16,PF00069.24" Wall-associated receptor kinase galacturonan-binding|Protein tyrosine kinase|Protein kinase domain TRINITY_DN24657_c0_g1_i1 100.5774266 62.839338 138.3155152 2.201097586 1.138223109 1.12E-05 8.97E-05 Up 1.926436 2.703224 2.290892 3.940146 4.012584 4.296235 XP_011076647.1 dehydration-responsive element-binding protein 2A-like [Sesamum indicum] Q0JQF7|DRE2A_ORYSJ Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonica OX=39947 GN=DREB2A PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YKCQ dehydration-responsive element-binding protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);" PF00847.19 AP2 domain TRINITY_DN24660_c0_g2_i4 28.93788664 47.82507117 10.05070211 0.210155508 -2.250470828 1.11E-05 8.93E-05 Down 3.780475 3.411429 3.671226 1.375113 9.30E-107 0.4938178 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24662_c0_g1_i4 31.10738668 41.83551708 20.37925628 0.487128108 -1.037626864 0.025725345 0.083119837 Down 6.457813 3.019933 5.531271 2.557427 1.767071 1.624862 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24662_c0_g2_i2 17.06862687 32.30252445 1.834729289 0.056798325 -4.1380078 3.58E-06 3.14E-05 Down 6.401171 3.038858 3.555915 0 0.4873755 0.1715346 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24662_c1_g3_i1 37.96052919 75.92105839 0 0 #NAME? 9.60E-06 7.79E-05 Down 15.96542 23.50852 3.57687 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24673_c0_g3_i1 8.562358341 17.12471668 0 0 #NAME? 0.004660657 0.019971793 Down 2.52128 0.6155718 6.052455 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24685_c0_g1_i2 110.1723374 202.2492236 18.09545126 0.089471054 -3.482435174 5.57E-33 3.47E-31 Down 8.217276 7.820279 9.197587 0.4446839 0.9026625 0.4780574 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24698_c0_g1_i8 116.3387175 173.4152943 59.26214069 0.341735375 -1.549048497 1.45E-05 0.000114171 Down 10.19319 13.24247 11.39208 2.765163 1.115293 5.766703 PWA45758.1 Protein transport protein SEC61 gamma-3 subunit [Artemisia annua] Q9SMP2|S61G3_ARATH Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 GN=SEC61G3 PE=1 SV=1 sly:101247903 K07342 "SEC61G, SSS1, secE" protein transport protein SEC61 subunit gamma and related proteins ko04145|ko04141|ko03060 Phagosome|Protein processing in endoplasmic reticulum|Protein export KOG3498 "Preprotein translocase, gamma subunit" [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U ENOG4111WJ7 protein transport protein sec61 Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: protein targeting (GO:0006605);|Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN24698_c0_g2_i1 24.6680542 49.33610841 0 0 #NAME? 4.58E-16 1.14E-14 Down 5.601713 3.420335 4.675382 3.17E-54 5.07E-68 3.65E-68 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24698_c0_g3_i4 90.25634905 180.5126981 0 0 #NAME? 3.54E-56 4.55E-54 Down 13.11607 14.86075 12.96363 0 0 0 BAG14300.1 glutathione S-transferase [Perilla frutescens var. crispa] -- -- pxb:103927912 K00760 "hprT, hpt, HPRT1" hypoxanthine phosphoribosyltransferase ko00230 Purine metabolism KOG3367 Hypoxanthine-guanine phosphoribosyltransferase [F] METABOLISM Nucleotide transport and metabolism F COG0634 hypoxanthine phosphoribosyltransferase -- -- -- TRINITY_DN24698_c0_g5_i4 191.9405338 383.1565971 0.724470471 0.001890795 -9.046791543 4.59E-86 1.01E-83 Down 9.478396 12.45262 10.59968 5.57E-89 0.03818069 3.00E-42 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24700_c0_g4_i1 66.53845916 106.7574036 26.31951467 0.246535732 -2.020131333 0.019408879 0.066177966 Down 10.75274 34.14308 16.91489 6.402466 2.74836 3.043395 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24700_c0_g7_i1 122.134243 167.7932664 76.47521962 0.455770492 -1.133620571 0.024553068 0.080044343 Down 18.53847 11.90454 28.01329 4.883866 9.169636 7.527162 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24712_c0_g1_i7 275.4677355 376.8867083 174.0487627 0.461806582 -1.114639358 5.44E-12 9.84E-11 Down 12.76282 13.04021 13.09738 4.348781 4.937772 5.2033 PIN13150.1 G1/S-specific cyclin D [Handroanthus impetiginosus] P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD1-1 PE=1 SV=3 sind:105168218 K18810 CYCD1_2_4 "cyclin D1/2/4, plant" -- -- KOG0656 G1/S-specific cyclin D [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D ENOG410XRKC "(DC) complex that phosphorylates and inhibits members of the retinoblastoma (RB) protein family including RB1 and regulates the cell-cycle during G(1) S transition. Phosphorylation of RB1 allows dissociation of the transcription factor E2F from the RB E2F complex and the subsequent transcription of E2F target genes which are responsible for the progression through the G(1) phase. Hypophosphorylates RB1 in early G(1) phase. Cyclin D-CDK4 complexes are major integrators of various mitogenenic and antimitogenic signals. Also substrate for SMAD3, phosphorylating SMAD3 in a cell-cycle-dependent manner and repressing its transcriptional activity. Component of the ternary complex, cyclin" Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);|Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: cyclin-dependent protein kinase holoenzyme complex (GO:0000307);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: regulation of mitotic nuclear division (GO:0007088);|Biological Process: positive regulation of cell proliferation (GO:0008284);|Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);|Molecular Function: protein kinase binding (GO:0019901);|Biological Process: positive regulation of cell cycle (GO:0045787);|Biological Process: cell division (GO:0051301); "PF00134.22,PF02984.18" "Cyclin, N-terminal domain|Cyclin, C-terminal domain" TRINITY_DN24723_c0_g2_i2 88.74574759 52.84710856 124.6443866 2.358584793 1.237921468 5.75E-06 4.85E-05 Up 1.217464 1.136068 1.061848 2.350381 2.19171 1.993305 XP_012856881.1 PREDICTED: glutamate receptor 2.7-like [Erythranthe guttata] Q9C5V5|GLR28_ARATH Glutamate receptor 2.8 OS=Arabidopsis thaliana OX=3702 GN=GLR2.8 PE=2 SV=2 sind:105157904 K05387 GRIP "glutamate receptor, ionotropic, plant" -- -- KOG1052 Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [PET] METABOLISM|METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Amino acid transport and metabolism |Signal transduction mechanisms P ENOG41120B7 Glutamate-gated receptor that probably acts as non- selective cation channel (By similarity) Molecular Function: ionotropic glutamate receptor activity (GO:0004970);|Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: intracellular (GO:0005622);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: calcium ion transport (GO:0006816);|Molecular Function: glutamate receptor activity (GO:0008066);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: calcium-mediated signaling (GO:0019722);|Biological Process: cellular response to amino acid stimulus (GO:0071230); "PF01094.27,PF00060.25,PF00497.19,PF13458.5,PF10613.8" "Receptor family ligand binding region|Ligand-gated ion channel|Bacterial extracellular solute-binding proteins, family 3|Periplasmic binding protein|Ligated ion channel L-glutamate- and glycine-binding site" TRINITY_DN24734_c0_g1_i8 27.51320851 52.45385274 2.57256429 0.049044334 -4.349769706 1.96E-06 1.80E-05 Down 2.130506 4.884935 2.661253 0.3619266 4.55E-06 5.41E-05 XP_012833186.1 PREDICTED: uncharacterized protein C630.12 isoform X1 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24734_c0_g4_i1 12.09217852 24.18435704 0 0 #NAME? 0.000172637 0.001088255 Down 3.887656 2.237995 0.8059838 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24736_c1_g1_i5 260.2067711 434.6600451 85.75349706 0.197288658 -2.341620075 8.08E-40 6.43E-38 Down 34.44853 38.33797 34.4375 5.335372 4.936854 6.783221 XP_012829754.1 PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Erythranthe guttata] Q9SA16|P2A09_ARATH Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YWN9 Protein PHLOEM PROTEIN 2-LIKE Molecular Function: carbohydrate binding (GO:0030246); PF14299.5 Phloem protein 2 TRINITY_DN24749_c0_g1_i1 16.22729684 32.45459368 0 0 #NAME? 7.35E-11 1.19E-09 Down 3.285482 5.304098 5.52523 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24749_c0_g3_i1 15.81577211 31.63154422 0 0 #NAME? 8.30E-10 1.19E-08 Down 2.415317 4.366394 2.252294 1.06E-74 1.74E-59 5.93E-60 PSS01626.1 Trafficking protein particle complex subunit like [Actinidia chinensis var. chinensis] -- -- sot:102600916 K20305 "TRAPPC8, TRS85" trafficking protein particle complex subunit 8 -- -- KOG1938 Protein with predicted involvement in meiosis (GSG1) [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " S ENOG410XPCJ trafficking protein particle complex -- -- -- TRINITY_DN24753_c0_g3_i1 8.924118902 1.230195228 16.61804258 13.50845963 3.755791268 0.000565022 0.003148543 Up 0 0 0.4869202 2.47127 1.930447 1.175215 PIN07884.1 Monodehydroascorbate/ferredoxin reductase [Handroanthus impetiginosus] Q8S3R2|MDAR2_ORYSJ "Monodehydroascorbate reductase 2, peroxisomal OS=Oryza sativa subsp. japonica OX=39947 GN=MDAR2 PE=2 SV=1" dosa:Os02t0707100-01 K08232 E1.6.5.4 monodehydroascorbate reductase (NADH) ko00053 Ascorbate and aldarate metabolism KOG1336 Monodehydroascorbate/ferredoxin reductase [R] POORLY CHARACTERIZED General function prediction only S COG0446 pyridine nucleotide-disulfide oxidoreductase Cellular Component: peroxisomal membrane (GO:0005778);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: monodehydroascorbate reductase (NADH) activity (GO:0016656);|Molecular Function: flavin adenine dinucleotide binding (GO:0050660); -- -- TRINITY_DN24756_c1_g1_i7 385.0835304 215.3636281 554.8034326 2.5761241 1.365202094 1.84E-22 6.94E-21 Up 10.81882 11.19189 10.80885 23.25604 22.64117 22.24927 XP_021652219.1 non-functional NADPH-dependent codeinone reductase 2-like [Hevea brasiliensis] Q9SQ64|COR2_PAPSO Non-functional NADPH-dependent codeinone reductase 2 OS=Papaver somniferum OX=3469 GN=COR2 PE=1 SV=1 -- -- -- -- -- -- KOG1577 Aldo/keto reductase family proteins [R] POORLY CHARACTERIZED General function prediction only S COG0656 reductase Cellular Component: cytosol (GO:0005829);|Molecular Function: oxidoreductase activity (GO:0016491); PF00248.20 Aldo/keto reductase family TRINITY_DN24763_c0_g1_i2 107.0837946 48.73005771 165.4375316 3.394979184 1.763402729 4.41E-12 8.05E-11 Up 1.582325 2.145504 1.452544 4.651168 4.638111 4.957413 EYU38009.1 hypothetical protein MIMGU_mgv11b003533mg [Erythranthe guttata] Q9SX98|LHTL8_ARATH Lysine histidine transporter-like 8 OS=Arabidopsis thaliana OX=3702 GN=AATL1 PE=1 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Cellular Component: integral component of membrane (GO:0016021); PF01490.17 Transmembrane amino acid transporter protein TRINITY_DN24766_c0_g1_i5 425.4477492 583.2959478 267.5995505 0.458771489 -1.124152359 4.54E-17 1.23E-15 Down 32.24187 30.25988 32.16148 11.34733 11.63899 12.0388 XP_011085146.1 mitochondrial amidoxime reducing component 2 [Sesamum indicum] Q655R6|MOCOS_ORYSJ Molybdenum cofactor sulfurase OS=Oryza sativa subsp. japonica OX=39947 GN=MCSU3 PE=2 SV=2 -- -- -- -- -- -- KOG2362 Uncharacterized Fe-S protein [R] POORLY CHARACTERIZED General function prediction only S COG3217 MOSC domain-containing protein Biological Process: Mo-molybdopterin cofactor biosynthetic process (GO:0006777);|Molecular Function: Mo-molybdopterin cofactor sulfurase activity (GO:0008265);|Molecular Function: lyase activity (GO:0016829);|Molecular Function: molybdenum ion binding (GO:0030151);|Molecular Function: pyridoxal phosphate binding (GO:0030170);|Molecular Function: molybdenum cofactor sulfurtransferase activity (GO:0102867); "PF03476.15,PF03473.16" MOSC N-terminal beta barrel domain|MOSC domain TRINITY_DN24769_c0_g1_i4 143.1405463 228.3444074 57.93668521 0.253725002 -1.978662406 7.43E-18 2.13E-16 Down 11.80885 11.54361 10.43963 1.884653 2.643924 2.407499 XP_011090999.1 uncharacterized protein LOC105171546 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG4178 Soluble epoxide hydrolase [I] METABOLISM Lipid transport and metabolism S COG0596 Alpha beta hydrolase -- "PF12697.6,PF00561.19,PF12146.7" "Alpha/beta hydrolase family|alpha/beta hydrolase fold|Serine aminopeptidase, S33" TRINITY_DN2476_c0_g1_i1 3.922089437 7.072602181 0.771576693 0.10909375 -3.196359644 0.044942742 0.130132415 Down 1.008577 0.4910854 2.170991 0 0 0.263117 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24774_c1_g1_i1 818.6524612 534.9411237 1102.363799 2.060719862 1.043148396 4.72E-24 1.96E-22 Up 25.14239 27.86022 28.5366 43.0729 48.58352 43.90221 XP_011094624.1 UDP-glycosyltransferase 86A1-like [Sesamum indicum] Q9SJL0|U86A1_ARATH UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana OX=3702 GN=UGT86A1 PE=2 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN24775_c4_g1_i1 39.47808378 57.39635244 21.55981512 0.375630405 -1.412614249 0.000809576 0.004331575 Down 3.635129 4.174449 3.263864 0.8777639 1.284274 1.233043 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24775_c5_g1_i1 4.226531073 8.453062145 0 0 #NAME? 0.002919693 0.013350823 Down 0.918963 1.336213 1.706901 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24777_c0_g3_i1 15.92376218 23.34806621 8.499458145 0.364032638 -1.457860289 0.035611509 0.10826557 Down 3.587671 3.392129 1.951743 1.580343 0.5131027 0.5258777 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24781_c0_g2_i2 38.32259166 61.86097933 14.78420398 0.238990785 -2.064973106 1.75E-06 1.62E-05 Down 5.202075 4.955847 5.787581 0.2709991 0.5640382 2.194517 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24791_c0_g1_i1 74.95367445 149.1723305 0.735018369 0.00492731 -7.66498394 1.38E-23 5.59E-22 Down 14.06596 23.16719 15.75765 0.2140062 6.27E-40 0.03603921 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24791_c0_g2_i1 67.73653424 106.7477872 28.72528124 0.269094864 -1.893813241 5.09E-09 6.67E-08 Down 4.279221 5.021482 5.456205 0.958857 0.9181438 1.31958 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24791_c1_g1_i5 176.3726554 255.3326155 97.41269523 0.381512934 -1.390196128 3.76E-12 6.92E-11 Down 15.95331 18.15447 19.37857 6.347871 5.608683 4.539442 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24791_c1_g3_i2 27.96208243 55.55665567 0.367509184 0.006615034 -7.240035642 8.58E-17 2.27E-15 Down 3.898415 2.44657 3.440412 0.06148331 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24791_c1_g5_i1 63.1192459 122.9048987 3.333593086 0.027123354 -5.204320596 5.19E-11 8.55E-10 Down 16.08872 8.140341 9.934081 0.3775336 0.1918061 0.2193503 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24791_c1_g6_i1 146.3593077 209.1267746 83.59184084 0.399718501 -1.322943746 0.000804105 0.004304838 Down 25.55119 45.52566 28.71082 11.01955 10.37734 10.71475 XP_015575166.1 uncharacterized protein LOC107261307 [Ricinus communis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24791_c1_g7_i1 12.5829435 24.79837781 0.367509184 0.014819888 -6.076321635 1.75E-07 1.86E-06 Down 1.556661 2.312006 2.001072 0.05895864 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24791_c1_g9_i1 119.0861191 197.9928535 40.1793847 0.20293351 -2.300920982 0.000188899 0.001181247 Down 43.60368 24.27929 22.33394 7.536261 4.728918 2.385611 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24791_c2_g1_i1 3.644458774 7.288917548 0 0 #NAME? 0.007379452 0.029531135 Down 0.7785364 1.319896 0.91976 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24794_c0_g1_i2 235.8194935 342.058461 129.5805259 0.378825671 -1.400393998 1.23E-15 2.97E-14 Down 19.58221 20.88623 22.29164 5.848781 6.957978 6.364578 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24796_c0_g6_i1 15.34051628 7.296676745 23.38435582 3.204795367 1.68023224 0.010638097 0.040047698 Up 1.916024 0.3645822 0.5326435 2.476542 2.438281 2.236907 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24796_c2_g1_i1 26.88381903 50.4600554 3.307582659 0.065548534 -3.931292674 3.75E-06 3.27E-05 Down 5.128443 10.19148 5.141365 1.044811 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24813_c1_g1_i1 126.0363578 168.5113111 83.56140445 0.495880092 -1.011936788 0.000635217 0.00348916 Down 5.66748 6.394287 8.710661 2.766579 3.382688 2.131177 ALM25790.1 cytochrome P450 728D17-like protein [Salvia pomifera] Q6WG30|T5H_TAXCU Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata OX=99806 PE=1 SV=2 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: heme binding (GO:0020037);|Biological Process: paclitaxel biosynthetic process (GO:0042617);|Molecular Function: taxadiene 5-alpha-hydroxylase activity (GO:0050604); PF00067.21 Cytochrome P450 TRINITY_DN24813_c2_g1_i16 478.1518992 659.877425 296.4263734 0.449214297 -1.154524251 2.46E-19 7.71E-18 Down 13.50176 12.7869 12.70436 4.51617 5.148305 4.456786 XP_012831923.1 PREDICTED: probable DNA helicase MCM8 [Erythranthe guttata] Q9SF37|MCM8_ARATH Probable DNA helicase MCM8 OS=Arabidopsis thaliana OX=3702 GN=MCM8 PE=2 SV=2 sind:105174339 K10737 MCM8 DNA helicase MCM8 -- -- KOG0480 "DNA replication licensing factor, MCM6 component" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG1241 dna replication licensing factor Biological Process: double-strand break repair via homologous recombination (GO:0000724);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: helicase activity (GO:0004386);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA replication initiation (GO:0006270);|Biological Process: male meiotic nuclear division (GO:0007140);|Biological Process: female meiotic nuclear division (GO:0007143);|Biological Process: pollen development (GO:0009555);|Molecular Function: metal ion binding (GO:0046872); PF00493.22 MCM2/3/5 family TRINITY_DN24814_c0_g3_i1 9.419182084 0.976834689 17.86152948 18.28510974 4.19259738 5.68E-05 0.000397307 Up 0.5769326 0.003146951 0 2.450124 3.05073 3.394074 XP_011092235.1 uncharacterized protein LOC105172486 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24815_c0_g2_i1 220.3419883 137.5501512 303.1338253 2.20380583 1.139997119 1.75E-10 2.72E-09 Up 10.11232 8.315784 9.650038 15.41507 17.49715 16.95877 XP_011086573.1 uncharacterized protein LOC105168262 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41114DH Protein of unknown function (DUF1645) -- PF07816.10 Protein of unknown function (DUF1645) TRINITY_DN24819_c0_g1_i5 59.8550094 111.1873669 8.522651939 0.076651262 -3.705546653 1.90E-20 6.40E-19 Down 3.61096 2.954641 4.229015 0.1405492 0.3175556 0.2300413 XP_021677094.1 uncharacterized protein LOC110662438 [Hevea brasiliensis] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); "PF14244.5,PF14223.5" gag-polypeptide of LTR copia-type|gag-polypeptide of LTR copia-type TRINITY_DN24819_c0_g3_i1 10.50442362 19.48397302 1.524874224 0.078263002 -3.675525735 0.000158911 0.001010144 Down 1.651244 1.719547 2.008478 0.1164041 0 0.2535864 XP_021686353.1 uncharacterized protein LOC110669156 [Hevea brasiliensis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- "PF14244.5,PF14223.5" gag-polypeptide of LTR copia-type|gag-polypeptide of LTR copia-type TRINITY_DN24819_c0_g4_i1 4.482221827 8.229425285 0.735018369 0.089315881 -3.484939472 0.023563964 0.077336347 Down 1.228952 0.3021245 1.947893 0.2696154 7.38E-33 2.29E-39 PNX64030.1 "hypothetical protein L195_g053809, partial [Trifolium pratense]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN24819_c1_g1_i1 74.41089537 21.18848574 127.633305 6.023710545 2.590652446 7.01E-16 1.73E-14 Up 0.2566052 0.5749243 0.3857467 1.859232 2.197778 1.89601 XP_009605195.1 PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Nicotiana tomentosiformis] Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana OX=3702 GN=At5g49770 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YEFN Leucine-rich repeat receptor-like protein kinase -- "PF07714.16,PF00069.24,PF13855.5,PF12799.6" Protein tyrosine kinase|Protein kinase domain|Leucine rich repeat|Leucine Rich repeats (2 copies) TRINITY_DN24826_c0_g2_i2 96.95458829 62.07577072 131.8334059 2.123749803 1.086613814 3.81E-05 0.000276568 Up 4.652567 3.175088 4.365898 7.636325 6.591024 6.700648 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24829_c0_g1_i5 265.5075255 166.4227372 364.5923137 2.190760228 1.131431594 3.13E-12 5.80E-11 Up 6.167831 5.893444 5.566651 10.86641 11.26844 8.972283 PIM99848.1 1-aminocyclopropane-1-carboxylate synthase [Handroanthus impetiginosus] P31531|1A1C_SOYBN 1-aminocyclopropane-1-carboxylate synthase OS=Glycine max OX=3847 GN=ACS1 PE=2 SV=1 sind:105164055 K01762 ACS 1-aminocyclopropane-1-carboxylate synthase ko00270 Cysteine and methionine metabolism KOG0256 "1-aminocyclopropane-1-carboxylate synthase, and related proteins" [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms E COG0436 aminotransferase Biological Process: ethylene biosynthetic process (GO:0009693);|Biological Process: fruit ripening (GO:0009835);|Molecular Function: 1-aminocyclopropane-1-carboxylate synthase activity (GO:0016847);|Molecular Function: pyridoxal phosphate binding (GO:0030170); PF00155.20 Aminotransferase class I and II TRINITY_DN24832_c1_g2_i1 11.83796941 22.94092044 0.735018369 0.03203962 -4.963999162 2.59E-06 2.33E-05 Down 2.256909 1.530331 2.367725 0.1361279 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24836_c0_g1_i1 59.83744091 119.6748818 0 0 #NAME? 1.11E-37 8.19E-36 Down 13.4619 17.17968 12.78263 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24836_c0_g3_i4 59.80597439 119.6119488 0 0 #NAME? 1.14E-37 8.40E-36 Down 12.70691 13.63624 11.28613 5.95E-91 4.25E-82 1.63E-93 PIN11607.1 hypothetical protein CDL12_15792 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z7FJ NA -- -- -- TRINITY_DN24836_c0_g5_i1 12.08611839 24.17223677 0 0 #NAME? 3.47E-08 4.09E-07 Down 2.163621 2.142126 4.249751 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24842_c0_g2_i1 8.519963044 2.412503302 14.62742279 6.063172132 2.600072781 0.010935254 0.040955776 Up 8.34E-50 0.4691066 0.7598479 1.650571 1.648197 3.353309 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24844_c1_g1_i1 11.75122037 0.246039046 23.25640169 94.52321533 6.5625968 9.18E-08 1.02E-06 Up 0 4.90E-47 0.09334633 2.670277 1.961784 1.219217 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24844_c1_g2_i1 7.59383409 14.82543295 0.362235236 0.024433366 -5.355003538 0.000164271 0.001039994 Down 1.371898 1.106697 1.252362 0 0.0701 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24844_c2_g1_i6 232.2462978 321.4757097 143.0168859 0.444876181 -1.168524238 0.008549832 0.033439819 Down 54.45709 50.74665 35.68332 15.56225 28.26405 6.516573 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24844_c2_g2_i2 58.9540042 31.9529519 85.95505651 2.690050572 1.427633295 0.001019461 0.005311187 Up 5.576114 4.971054 3.144223 5.994101 12.06059 11.63003 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24844_c2_g5_i1 81.5145936 135.1506973 27.8784899 0.20627707 -2.277344634 9.31E-14 1.95E-12 Down 21.5897 25.98167 24.15891 6.369898 1.942422 3.463146 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24857_c0_g1_i21 469.83141 748.2390527 191.4237674 0.255832366 -1.966729298 1.26E-48 1.31E-46 Down 17.50803 16.82615 16.36135 3.248464 3.899099 3.318436 PIN10288.1 Galactinol--sucrose galactosyltransferase [Handroanthus impetiginosus] Q94A08|RFS2_ARATH Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2 sind:105162538 K06617 E2.4.1.82 raffinose synthase ko00052 Galactose metabolism -- -- -- -- -- S ENOG410YBU9 raffinose synthase "Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: raffinose family oligosaccharide biosynthetic process (GO:0010325);|Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);|Biological Process: raffinose catabolic process (GO:0034484);|Molecular Function: raffinose alpha-galactosidase activity (GO:0052692);|Biological Process: response to karrikin (GO:0080167);" PF05691.11 Raffinose synthase or seed imbibition protein Sip1 TRINITY_DN24863_c1_g2_i1 45.34594662 21.37735446 69.31453878 3.242428286 1.697074666 1.88E-05 0.000145067 Up 1.284467 1.969419 2.132981 4.137095 4.47202 5.631398 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24864_c0_g1_i1 98.27118868 192.1322671 4.410110212 0.022953512 -5.445141308 4.97E-38 3.73E-36 Down 8.491887 11.06797 7.995497 0.4863206 3.98E-46 1.69E-38 KZV22124.1 hypothetical protein F511_11652 [Dorcoceras hygrometricum] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YB3X Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN24864_c0_g3_i1 313.1327391 618.8685475 7.396930592 0.011952345 -6.386562454 5.86E-154 2.74E-151 Down 36.02709 31.08356 33.292 0.5365958 0.2154516 0.2147071 KZV22124.1 hypothetical protein F511_11652 [Dorcoceras hygrometricum] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YB3X Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN24872_c1_g3_i2 147.1208328 242.119914 52.12175158 0.215272469 -2.215764271 5.18E-22 1.92E-20 Down 12.52752 12.4344 12.78256 2.771965 2.267369 1.518306 XP_016492889.1 "PREDICTED: serine/threonine-protein kinase STN8, chloroplastic-like [Nicotiana tabacum]" Q9LZV4|STN8_ARATH "Serine/threonine-protein kinase STN8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STN8 PE=2 SV=1" -- -- -- -- -- -- KOG0594 Protein kinase PCTAIRE and related kinases [R] POORLY CHARACTERIZED General function prediction only -- -- -- Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: thylakoid (GO:0009579);|Biological Process: photosystem II stabilization (GO:0042549); -- -- TRINITY_DN24872_c1_g4_i2 46.10268806 67.4885949 24.71678122 0.366236418 -1.449152839 0.00013599 0.000876968 Down 8.305296 10.31092 11.37947 1.899785 2.533278 4.310191 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24873_c0_g1_i1 5.195264866 10.39052973 0 0 #NAME? 0.000897622 0.004743944 Down 2.35852 2.531602 0.7877175 1.16E-74 0 0 OMO58009.1 hypothetical protein CCACVL1_25614 [Corchorus capsularis] -- -- sind:105178123 K03240 EIF2B5 translation initiation factor eIF-2B subunit epsilon ko03013 RNA transport KOG1461 "Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6)" [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " M COG1208 nucleotidyl transferase -- -- -- TRINITY_DN24873_c0_g2_i4 401.2604483 589.6682142 212.8526824 0.36097025 -1.470048157 5.93E-26 2.73E-24 Down 14.11751 15.86306 14.64662 4.528091 4.184246 4.272588 XP_011099797.1 translation initiation factor eIF-2B subunit epsilon [Sesamum indicum] P56287|EI2BE_SCHPO Probable translation initiation factor eIF-2B subunit epsilon OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tif225 PE=1 SV=1 sind:105178123 K03240 EIF2B5 translation initiation factor eIF-2B subunit epsilon ko03013 RNA transport KOG1461 "Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6)" [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " M COG1208 nucleotidyl transferase Biological Process: cytoplasmic translational initiation (GO:0002183);|Molecular Function: translation initiation factor activity (GO:0003743);|Molecular Function: guanyl-nucleotide exchange factor activity (GO:0005085);|Cellular Component: cytosol (GO:0005829);|Cellular Component: eukaryotic translation initiation factor 2B complex (GO:0005851);|Molecular Function: nucleotidyltransferase activity (GO:0016779);|Molecular Function: translation initiation factor binding (GO:0031369); "PF02020.17,PF00483.22,PF00132.23" eIF4-gamma/eIF5/eIF2-epsilon|Nucleotidyl transferase|Bacterial transferase hexapeptide (six repeats) TRINITY_DN24873_c0_g3_i1 10.45741161 17.26610112 3.648722099 0.211322873 -2.242479164 0.009373974 0.036112435 Down 2.069971 2.667641 4.369914 0.7050767 0.7160089 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2487_c0_g1_i1 3.465249761 6.930499521 0 0 #NAME? 0.010225778 0.038783127 Down 2.165211 1.080382 0.8595963 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24900_c0_g1_i3 40.32001517 67.83433162 12.80569871 0.188779021 -2.405229648 3.47E-08 4.09E-07 Down 2.301701 3.287348 2.513134 0.264884 0.2281452 0.7272888 XP_011095102.1 "alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Sesamum indicum]" Q9SR86|AGT23_ARATH "Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g08860 PE=2 SV=1" sind:105174636 K00827 AGXT2 alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase ko00260|ko00250|ko00280|ko00270 "Glycine, serine and threonine metabolism|Alanine, aspartate and glutamate metabolism|Valine, leucine and isoleucine degradation|Cysteine and methionine metabolism" KOG1404 Alanine-glyoxylate aminotransferase AGT2 [E] METABOLISM Amino acid transport and metabolism E COG0160 transaminase activity Cellular Component: mitochondrion (GO:0005739);|Molecular Function: alanine-glyoxylate transaminase activity (GO:0008453);|Biological Process: photorespiration (GO:0009853);|Molecular Function: pyridoxal phosphate binding (GO:0030170);|Biological Process: cellular response to nitrogen levels (GO:0043562); PF00202.20 Aminotransferase class-III TRINITY_DN24911_c1_g3_i4 262.5326442 486.0444761 39.02081235 0.08028239 -3.638772618 1.47E-76 2.78E-74 Down 9.521768 9.606679 9.088126 0.8961247 0.3761403 0.5576072 XP_011074375.1 transcription elongation factor SPT4 homolog 2 [Sesamum indicum] Q8LCQ3|SPT41_ARATH Transcription elongation factor SPT4 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At5g08565 PE=3 SV=3 sind:105159119 K15171 "SUPT4H1, SPT4" transcription elongation factor SPT4 -- -- -- -- -- -- -- -- -- -- "Molecular Function: RNA polymerase II complex binding (GO:0000993);|Molecular Function: single-stranded RNA binding (GO:0003727);|Biological Process: chromatin organization (GO:0006325);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: DSIF complex (GO:0032044);|Biological Process: positive regulation of DNA-templated transcription, elongation (GO:0032786);" -- -- TRINITY_DN24911_c1_g5_i2 100.448735 134.5087922 66.38867782 0.493563854 -1.018691353 8.86E-05 0.000594095 Down 7.538799 7.585304 7.610975 2.378013 3.716344 2.923328 XP_011099956.1 cell division control protein 2 homolog D [Sesamum indicum] Q38775|CDC2D_ANTMA Cell division control protein 2 homolog D OS=Antirrhinum majus OX=4151 GN=CDC2D PE=2 SV=1 sind:105178226 K07760 CDK cyclin-dependent kinase -- -- KOG0594 Protein kinase PCTAIRE and related kinases [R] POORLY CHARACTERIZED General function prediction only T ENOG410XPP3 Cyclin-Dependent Kinase Molecular Function: cyclin-dependent protein serine/threonine kinase activity (GO:0004693);|Molecular Function: ATP binding (GO:0005524);|Biological Process: cell cycle (GO:0007049);|Molecular Function: RNA polymerase II CTD heptapeptide repeat kinase activity (GO:0008353);|Biological Process: cell division (GO:0051301); "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN24919_c0_g2_i1 15.0804652 23.39707446 6.763855933 0.289089815 -1.790410312 0.009724048 0.037214713 Down 1.820534 2.079746 2.070897 0.4198173 0.2064318 0.7371255 XP_020552642.1 F-box protein At2g27310-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2491_c0_g1_i1 8.4863453 3.263437123 13.70925348 4.200863372 2.070685865 0.027431021 0.087688474 Up 1.498042 0 0.5861386 1.643897 3.17653 2.266343 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24921_c0_g6_i1 56.75614638 113.5122928 0 0 #NAME? 1.08E-32 6.66E-31 Down 19.77703 12.952 18.27555 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24924_c1_g2_i5 135.118268 233.2188599 37.01767602 0.158725053 -2.655398231 6.46E-27 3.15E-25 Down 11.32354 10.7438 10.36129 1.226029 1.720841 1.166843 -- -- -- -- -- -- -- -- -- -- KOG0231 Junctional membrane complex protein Junctophilin and related MORN repeat proteins [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN24924_c1_g3_i1 35.66209173 63.59630201 7.727881452 0.121514635 -3.04079801 2.70E-05 0.000201652 Down 4.831725 12.00024 10.14456 1.703968 0.6341949 0.2378087 XP_006442543.2 LOW QUALITY PROTEIN: protein DJ-1 homolog B [Citrus clementina] Q9MAH3|DJ1B_ARATH Protein DJ-1 homolog B OS=Arabidopsis thaliana OX=3702 GN=DJ1B PE=1 SV=1 cic:CICLE_v10021210mg K03152 thiJ protein deglycase -- -- KOG2764 Putative transcriptional regulator DJ-1 [RV] POORLY CHARACTERIZED|CELLULAR PROCESSES AND SIGNALING General function prediction only |Defense mechanisms S COG0693 PfpI family "Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Molecular Function: glyoxalase III activity (GO:0019172);|Molecular Function: protein deglycase activity (GO:0036524);|Biological Process: protein deglycation, glyoxal removal (GO:0036529);|Biological Process: guanine deglycation, glyoxal removal (GO:0106046);" -- -- TRINITY_DN24930_c2_g1_i1 471.6506738 888.5748567 54.72649095 0.061589061 -4.02118206 3.88E-145 1.64E-142 Down 16.64887 17.27173 17.927 0.8183873 0.7926753 0.9574964 XP_012849888.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Erythranthe guttata] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only ADL COG5049 5'-3' exoribonuclease Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); "PF00665.25,PF13976.5" Integrase core domain|GAG-pre-integrase domain TRINITY_DN24930_c3_g2_i1 19.78372223 2.744315258 36.82312919 13.41796614 3.746094103 3.51E-08 4.13E-07 Up 0.7293266 0.2323874 0.1841748 4.822462 4.191431 4.882816 AKN09539.1 basic helix-loop-helix transcription factor [Salvia miltiorrhiza] Q3EAI1|BH060_ARATH Transcription factor bHLH60 OS=Arabidopsis thaliana OX=3702 GN=BHLH60 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YEV1 transcription factor "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: protein dimerization activity (GO:0046983);" -- -- TRINITY_DN24930_c4_g2_i1 91.69089656 183.3817931 0 0 #NAME? 5.66E-57 7.38E-55 Down 17.80111 19.70724 16.51962 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24934_c0_g1_i1 70.74759943 103.6795764 37.81562246 0.364735503 -1.455077458 4.50E-06 3.88E-05 Down 5.147093 4.458716 3.928189 1.336383 1.450527 1.204695 XP_011080537.1 fimbrin-2 [Sesamum indicum] O50064|FIMB2_ARATH Fimbrin-2 OS=Arabidopsis thaliana OX=3702 GN=FIM2 PE=2 SV=1 sind:105163774 K17275 PLS1 plastin-1 -- -- KOG0046 "Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily" [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5069 "Microtubule associated monoxygenase, calponin and LIM domain containing" Cellular Component: cytoplasm (GO:0005737);|Cellular Component: actin filament (GO:0005884);|Cellular Component: actin filament bundle (GO:0032432);|Molecular Function: actin filament binding (GO:0051015);|Biological Process: actin filament bundle assembly (GO:0051017);|Biological Process: actin filament network formation (GO:0051639); -- -- TRINITY_DN24937_c0_g1_i1 16.05121746 23.64199241 8.460442505 0.357856578 -1.482546595 0.042723225 0.125061931 Down 5.591777 4.704401 3.796514 3.456188 0.3443761 0.1395999 XP_012840416.1 PREDICTED: UPF0235 protein C15orf40 homolog [Erythranthe guttata] -- -- sind:105178115 K09131 K09131 uncharacterized protein -- -- -- -- -- -- -- S ENOG41123AI "Uncharacterised ACR, YggU family COG1872" -- -- -- TRINITY_DN24946_c0_g3_i1 17.88943262 10.17153446 25.60733078 2.517548446 1.332019541 0.023159158 0.076272485 Up 2.109892 1.697547 0.5444531 2.225105 3.652918 2.95472 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24955_c0_g1_i1 18.55945833 9.815358634 27.30355803 2.781717821 1.475976079 0.018052239 0.062201707 Up 0.6669048 1.279297 1.547347 2.410111 3.644637 1.862338 XP_021725286.1 uncharacterized protein LOC110692558 [Chenopodium quinoa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z0Y2 transposon protein -- -- -- TRINITY_DN24955_c1_g1_i1 110.9396988 210.398393 11.48100458 0.054567929 -4.195802899 1.80E-41 1.51E-39 Down 9.099919 7.453969 9.147476 0.4447581 0.406687 0.2951781 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24955_c1_g2_i2 43.41552676 60.47288253 26.35817099 0.435867614 -1.198038085 0.006827288 0.02764595 Down 3.902042 5.093509 2.399354 1.279906 1.391475 1.278552 XP_021725286.1 uncharacterized protein LOC110692558 [Chenopodium quinoa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBST Mariner sub-class -- PF01498.17 Transposase TRINITY_DN24955_c1_g5_i1 59.09386205 109.9513741 8.236349986 0.074909023 -3.738716689 2.00E-20 6.70E-19 Down 8.059277 8.353689 9.234709 0.4053403 0.411679 0.7311542 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24956_c0_g2_i1 66.60349725 133.2069945 0 0 #NAME? 1.13E-26 5.39E-25 Down 10.01571 17.18452 14.71675 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24956_c0_g5_i1 10.39785122 20.79570245 0 0 #NAME? 4.65E-07 4.69E-06 Down 2.989559 4.278352 2.147243 9.64E-52 9.39E-26 3.16E-30 XP_011097970.1 uncharacterized protein LOC105176765 [Sesamum indicum] O80883|MB101_ARATH Transcription factor MYB101 OS=Arabidopsis thaliana OX=3702 GN=MYB101 PE=2 SV=1 -- -- -- -- -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: pollen development (GO:0009555);|Biological Process: response to gibberellin (GO:0009739);|Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);|Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);|Biological Process: regulation of gene expression (GO:0010468);|Biological Process: cell differentiation (GO:0030154);|Biological Process: positive regulation of programmed cell death (GO:0043068);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: pollen sperm cell differentiation (GO:0048235);|Biological Process: regulation of pollen tube growth (GO:0080092);|Cellular Component: pollen tube (GO:0090406);|Biological Process: regulation of leaf morphogenesis (GO:1901371);|Biological Process: protein storage vacuole organization (GO:1990019);" "PF00249.30,PF13921.5" Myb-like DNA-binding domain|Myb-like DNA-binding domain TRINITY_DN24957_c2_g1_i4 80.70637807 159.5439259 1.868830298 0.011713578 -6.415674305 1.05E-43 9.49E-42 Down 13.1615 13.04702 14.29368 0.1501901 0.0747984 0.1803909 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24960_c0_g3_i2 15.10458207 28.39798796 1.811176178 0.063778328 -3.970789924 0.027061609 0.086723395 Down 9.211384 8.228149 1.11E-81 0 0.8388265 4.54E-36 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24964_c0_g2_i1 87.42544233 18.57895165 156.271933 8.411235248 3.072317686 2.83E-20 9.41E-19 Up 0.09343183 0.3594014 0.3319347 2.059583 1.855599 1.458663 PWA63920.1 reverse transcriptase domain-containing protein [Artemisia annua] Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=3 SV=2 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" "PF00665.25,PF00078.26" Integrase core domain|Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN24977_c0_g1_i1 27.81489248 54.52725741 1.102527553 0.020219751 -5.628090978 1.00E-14 2.27E-13 Down 4.08154 5.125777 4.446301 0.2442825 0 0 EYU22892.1 "hypothetical protein MIMGU_mgv1a021984mg, partial [Erythranthe guttata]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF08387.9 FBD TRINITY_DN24977_c0_g3_i1 62.17282816 100.2018383 24.143818 0.240951847 -2.053183236 0.044408857 0.128882505 Down 11.13833 20.87267 4.67761 0.8782382 1.75034 4.500569 XP_022888573.1 "fructose-1,6-bisphosphatase 1, chloroplastic-like [Olea europaea var. sylvestris]" P09195|F16P1_WHEAT "Fructose-1,6-bisphosphatase, chloroplastic OS=Triticum aestivum OX=4565 GN=FBP PE=2 SV=1" sind:105161570 K03841 "FBP, fbp" "fructose-1,6-bisphosphatase I" ko00710|ko00030|ko00051|ko00010 Carbon fixation in photosynthetic organisms|Pentose phosphate pathway|Fructose and mannose metabolism|Glycolysis / Gluconeogenesis KOG1458 "Fructose-1,6-bisphosphatase" [G] METABOLISM Carbohydrate transport and metabolism G COG0158 "D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1" "Biological Process: sucrose metabolic process (GO:0005985);|Biological Process: response to cold (GO:0009409);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: response to cytokinin (GO:0009735);|Biological Process: photosynthetic electron transport in photosystem I (GO:0009773);|Cellular Component: stromule (GO:0010319);|Biological Process: reductive pentose-phosphate cycle (GO:0019253);|Biological Process: fructose 1,6-bisphosphate metabolic process (GO:0030388);|Molecular Function: fructose 1,6-bisphosphate 1-phosphatase activity (GO:0042132);|Molecular Function: metal ion binding (GO:0046872);|Cellular Component: apoplast (GO:0048046);" -- -- TRINITY_DN24985_c0_g1_i1 12.23954387 20.73896982 3.740117911 0.180342512 -2.471188574 0.006153223 0.025284081 Down 6.316346 2.87801 2.633125 1.42E-108 0.906057 0.9480416 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24986_c0_g1_i1 15.03543817 25.91086907 4.160007267 0.160550665 -2.638899452 0.012267279 0.045136467 Down 5.481147 1.632106 2.562233 0.2251082 0.2173347 0.8940498 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24989_c0_g1_i1 7.581752003 1.722273319 13.44123069 7.80435401 2.964279221 0.009574374 0.036737918 Up 0 0 0.9570249 1.451132 1.917685 2.689965 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24989_c0_g5_i1 19.58511538 28.82585474 10.34437601 0.358857564 -1.478516765 0.01576172 0.055613816 Down 6.572495 4.916298 4.757558 1.163348 2.351404 1.221129 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN24996_c0_g2_i2 70.52895485 105.9703827 35.08752698 0.33110692 -1.594630934 4.79E-07 4.82E-06 Down 8.980007 9.391069 7.801843 1.972509 2.042461 2.986355 XP_011090516.1 uncharacterized protein LOC105171185 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YC54 DUF630 DUF632 domains containing protein -- -- -- TRINITY_DN249_c0_g1_i1 8.667617268 17.33523454 0 0 #NAME? 7.04E-05 0.000482307 Down 1.059746 4.625194 3.482073 0 0 0 PHU10125.1 hypothetical protein BC332_21985 [Capsicum chinense] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG411244F NA -- -- -- TRINITY_DN25002_c0_g1_i10 65.64842975 95.00047801 36.2963815 0.382065251 -1.388109044 1.89E-05 0.000145842 Down 8.052608 6.654742 7.68441 3.023886 2.073262 1.781044 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25007_c0_g1_i1 4.372933622 8.745867245 0 0 #NAME? 0.002566387 0.011934844 Down 1.568693 0.6003864 1.096603 5.43E-48 8.84E-81 8.96E-64 KZV19244.1 hypothetical protein F511_35179 [Dorcoceras hygrometricum] Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YG89 Transcription factor "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: protein dimerization activity (GO:0046983);" -- -- TRINITY_DN25007_c0_g4_i1 23.11294974 42.1077245 4.118174993 0.097800939 -3.354007874 6.25E-08 7.11E-07 Down 4.82913 5.533044 8.665978 0.3727345 0.3702508 0.7593931 XP_011070274.1 transcription factor bHLH71 [Sesamum indicum] Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis thaliana OX=3702 GN=BHLH71 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YG89 Transcription factor "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: multicellular organism development (GO:0007275);|Molecular Function: protein dimerization activity (GO:0046983);" -- -- TRINITY_DN25014_c0_g1_i3 11.26708878 22.53417756 0 0 #NAME? 1.03E-07 1.13E-06 Down 1.725584 2.051796 2.407742 0 0 0 XP_011095224.2 protein trichome birefringence-like 34 [Sesamum indicum] O80919|TBL34_ARATH Protein trichome birefringence-like 34 OS=Arabidopsis thaliana OX=3702 GN=TBL34 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111BYZ expressed protein Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: O-acetyltransferase activity (GO:0016413);|Biological Process: xylan biosynthetic process (GO:0045492);|Molecular Function: xylan O-acetyltransferase activity (GO:1990538); -- -- TRINITY_DN25017_c0_g1_i1 498.1485243 321.2297939 675.0672547 2.10150885 1.071425532 3.93E-18 1.14E-16 Up 13.77238 14.04716 12.12073 23.75187 22.08767 21.85446 EYU21355.1 hypothetical protein MIMGU_mgv1a0072631mg [Erythranthe guttata] P41382|IF410_TOBAC Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 gmx:100806423 K03257 EIF4A translation initiation factor 4A ko03013 RNA transport KOG0327 "Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases" [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " L COG0513 purine NTP-dependent helicase activity Molecular Function: translation initiation factor activity (GO:0003743);|Molecular Function: helicase activity (GO:0004386);|Molecular Function: ATP binding (GO:0005524); "PF00270.28,PF00271.30,PF04851.14" "DEAD/DEAH box helicase|Helicase conserved C-terminal domain|Type III restriction enzyme, res subunit" TRINITY_DN25019_c0_g3_i1 11.68950991 5.874092315 17.50492751 2.980022541 1.575323243 0.043165191 0.126119819 Up 1.243473 1.192965 0.9681093 4.18413 1.382483 2.713528 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2502_c0_g1_i1 8.011831147 16.02366229 0 0 #NAME? 0.009962603 0.037941726 Down 2.516121 1.511682 0 0 0 0 KRH03350.1 hypothetical protein GLYMA_17G092400 [Glycine max] O82147|SPDE_COFAR Spermidine synthase OS=Coffea arabica OX=13443 PE=2 SV=1 gmx:100792085 K00797 "speE, SRM" spermidine synthase ko00330|ko00410|ko00480|ko00270 Arginine and proline metabolism|beta-Alanine metabolism|Glutathione metabolism|Cysteine and methionine metabolism KOG1562 Spermidine synthase [E] METABOLISM Amino acid transport and metabolism E COG0421 "Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor (By similarity)" Molecular Function: spermidine synthase activity (GO:0004766);|Biological Process: spermidine biosynthetic process (GO:0008295); "PF01564.16,PF17284.1" Spermine/spermidine synthase domain|Spermidine synthase tetramerisation domain TRINITY_DN25035_c0_g1_i4 163.1230435 252.326532 73.91955513 0.292951972 -1.771263933 6.00E-17 1.60E-15 Down 9.639536 9.026968 10.32423 2.398921 2.203798 2.26083 PIN22426.1 K+/Cl- cotransporter KCC1 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2503_c0_g1_i2 57.37058623 114.016702 0.724470471 0.006354073 -7.298102573 3.11E-33 1.96E-31 Down 11.62894 13.77711 11.33839 0 0.2157929 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25041_c0_g1_i1 668.1860782 429.5542662 906.8178902 2.111067126 1.077972453 1.97E-22 7.42E-21 Up 8.834123 8.543116 8.506083 15.14013 14.60863 14.33959 XP_020549148.1 membrane protein of ER body-like protein [Sesamum indicum] Q8LPT3|MEBL_ARATH Membrane protein of ER body-like protein OS=Arabidopsis thaliana OX=3702 GN=MEBL PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41129ND VIT family Molecular Function: iron ion transmembrane transporter activity (GO:0005381);|Molecular Function: manganese ion transmembrane transporter activity (GO:0005384);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: intracellular sequestering of iron ion (GO:0006880);|Cellular Component: ER body (GO:0010168);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: cellular manganese ion homeostasis (GO:0030026); -- -- TRINITY_DN25044_c0_g3_i1 5.1670295 9.971823764 0.362235236 0.036325876 -4.782858593 0.004546054 0.019548981 Down 1.510879 2.319137 0.7970737 5.80E-06 0.100593 8.36E-05 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25044_c1_g1_i6 150.8696121 219.6346214 82.10460289 0.373823591 -1.419570478 3.88E-07 3.95E-06 Down 14.50951 12.59153 10.12325 5.135664 2.647914 3.446195 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25059_c0_g3_i1 9.480306223 18.96061245 0 0 #NAME? 1.47E-05 0.00011576 Down 1.420844 3.51745 1.497607 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25064_c0_g1_i1 105.7808034 65.74475998 145.8168468 2.217923479 1.149209592 3.64E-06 3.19E-05 Up 1.923107 2.675071 1.649245 3.514521 3.658284 4.020198 XP_011096309.1 L-type lectin-domain containing receptor kinase VII.1-like [Sesamum indicum] Q9S9U1|LRK71_ARATH L-type lectin-domain containing receptor kinase VII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK71 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00139.18,PF00069.24,PF07714.16" Legume lectin domain|Protein kinase domain|Protein tyrosine kinase TRINITY_DN25070_c0_g4_i1 11.15991194 22.31982388 0 0 #NAME? 1.33E-07 1.44E-06 Down 1.821892 2.303006 1.998404 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25072_c2_g1_i1 277.412923 544.1111443 10.71470183 0.01969212 -5.666237769 1.87E-127 6.54E-125 Down 20.39182 23.83739 22.09372 0.4640304 0.3455969 0.2446697 PIN26252.1 Loganate O-methyltransferase [Handroanthus impetiginosus] Q9FKD0|MT797_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana OX=3702 GN=At5g37970 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111PH9 methyltransferase Molecular Function: methyltransferase activity (GO:0008168);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN25072_c2_g4_i1 25.55199593 51.10399186 0 0 #NAME? 1.66E-16 4.28E-15 Down 5.93103 5.421058 4.14101 0 0 0 XP_022892987.1 B3 domain-containing protein Os03g0120900-like [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25072_c2_g5_i1 73.1694071 132.2592349 14.07957929 0.106454414 -3.23169233 1.38E-20 4.68E-19 Down 5.937962 5.990006 6.650612 0.6163405 0.5154312 0.4654232 PIN00488.1 Loganate O-methyltransferase [Handroanthus impetiginosus] Q9FKD0|MT797_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana OX=3702 GN=At5g37970 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111PH9 methyltransferase Molecular Function: methyltransferase activity (GO:0008168);|Molecular Function: metal ion binding (GO:0046872); PF03492.14 SAM dependent carboxyl methyltransferase TRINITY_DN25072_c2_g6_i1 298.1392007 422.1192878 174.1591136 0.412582696 -1.277244782 5.90E-16 1.47E-14 Down 36.96052 37.06814 37.13345 12.75236 13.48166 10.71472 XP_011075904.2 probable S-adenosylmethionine-dependent methyltransferase At5g37990 [Sesamum indicum] Q9LS10|MT810_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana OX=3702 GN=At5g38100 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111PH9 methyltransferase Molecular Function: methyltransferase activity (GO:0008168);|Molecular Function: metal ion binding (GO:0046872); PF03492.14 SAM dependent carboxyl methyltransferase TRINITY_DN25072_c2_g7_i1 113.3828657 225.9941547 0.771576693 0.003414144 -8.194260177 4.69E-42 3.99E-40 Down 28.84213 30.14911 40.60453 3.54E-08 3.95E-10 0.2800226 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25077_c0_g1_i5 124.530148 191.8821824 57.17811373 0.29798553 -1.746685821 2.72E-13 5.50E-12 Down 5.269032 6.090161 7.055742 1.1589 1.748385 1.507731 EPS67192.1 "hypothetical protein M569_07584, partial [Genlisea aurea]" Q7XJE5|MCA2_ARATH Metacaspase-2 OS=Arabidopsis thaliana OX=3702 GN=AMC2 PE=1 SV=1 -- -- -- -- -- -- KOG1546 Metacaspase involved in regulation of apoptosis [DO] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning |Posttranslational modification, protein turnover, chaperones " O ENOG410Y41C Metacaspase Molecular Function: cysteine-type endopeptidase activity (GO:0004197);|Biological Process: defense response (GO:0006952);|Biological Process: negative regulation of programmed cell death (GO:0043069); -- -- TRINITY_DN25079_c2_g2_i1 26.93708032 39.46890443 14.4052562 0.364977351 -1.454121154 0.00381529 0.016804222 Down 3.056043 2.58961 4.009914 1.234306 1.014358 0.5948015 KVH99752.1 "Ubiquitin-conjugating enzyme, E2 [Cynara cardunculus var. scolymus]" Q9LSP7|UBC32_ARATH Ubiquitin-conjugating enzyme E2 32 OS=Arabidopsis thaliana OX=3702 GN=UBC32 PE=2 SV=1 cam:101504636 K10578 "UBE2J1, NCUBE1, UBC6" ubiquitin-conjugating enzyme E2 J1 ko04120|ko04141 Ubiquitin mediated proteolysis|Protein processing in endoplasmic reticulum KOG0428 Non-canonical ubiquitin conjugating enzyme 1 [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG5078 ubiquitin-conjugating enzyme Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: perinuclear region of cytoplasm (GO:0048471);|Molecular Function: ubiquitin conjugating enzyme activity (GO:0061631); -- -- TRINITY_DN25081_c0_g4_i3 124.0816423 211.6442478 36.51903675 0.172549158 -2.534920662 2.92E-13 5.90E-12 Down 12.8465 19.52848 17.41986 1.495393 3.659164 1.721499 CDP18734.1 unnamed protein product [Coffea canephora] Q9XGM1|VATD_ARATH V-type proton ATPase subunit D OS=Arabidopsis thaliana OX=3702 GN=VHA-D PE=1 SV=2 mtr:MTR_4g007030 K02149 "ATPeV1D, ATP6M" V-type H+-transporting ATPase subunit D ko04145|ko00190 Phagosome|Oxidative phosphorylation KOG1647 "Vacuolar H+-ATPase V1 sector, subunit D" [C] METABOLISM Energy production and conversion C COG1394 Produces ATP from ADP in the presence of a proton gradient across the membrane (By similarity) "Cellular Component: plant-type vacuole (GO:0000325);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: vacuolar acidification (GO:0007035);|Cellular Component: membrane (GO:0016020);|Molecular Function: proton-transporting ATPase activity, rotational mechanism (GO:0046961);" -- -- TRINITY_DN25081_c1_g1_i1 19.61551885 35.88689672 3.344140984 0.093185572 -3.423749597 8.31E-07 8.08E-06 Down 5.914577 5.666074 3.86912 0.9366894 3.23E-26 0.3362342 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25089_c2_g6_i1 33.03463571 8.471225621 57.5980458 6.799257672 2.765377245 0.006291133 0.025745888 Up 0.3755526 0.8196357 0.4945457 1.965641 2.070873 5.501806 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25098_c0_g2_i1 308.3300357 426.3194316 190.3406397 0.446474229 -1.16335119 4.49E-14 9.62E-13 Down 19.87324 18.90645 19.05478 7.044683 5.990355 7.846148 XP_011084031.1 plant intracellular Ras-group-related LRR protein 5 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25103_c1_g2_i1 45.66711968 28.03589226 63.29834711 2.257761106 1.174892842 0.002820487 0.012972982 Up 0.8521421 1.514083 1.633987 1.695998 2.738638 2.893245 XP_011092561.1 U-box domain-containing protein 26 [Sesamum indicum] Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YB5U Ubox domain-containing protein "Biological Process: defense response, incompatible interaction (GO:0009814);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: ubiquitin protein ligase activity (GO:0061630);" PF04564.14 U-box domain TRINITY_DN25105_c0_g1_i2 210.1569311 80.23685698 340.0770053 4.238413842 2.08352446 2.98E-28 1.55E-26 Up 5.905548 5.899194 5.323907 20.14774 19.51035 18.8042 CDP00399.1 unnamed protein product [Coffea canephora] -- -- gra:105771363 K06694 PSMD10 26S proteasome non-ATPase regulatory subunit 10 -- -- KOG4412 "26S proteasome regulatory complex, subunit PSMD10" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " S COG0666 Ankyrin Repeat -- "PF13637.5,PF12796.6,PF00023.29,PF13857.5,PF13606.5" Ankyrin repeats (many copies)|Ankyrin repeats (3 copies)|Ankyrin repeat|Ankyrin repeats (many copies)|Ankyrin repeat TRINITY_DN25105_c0_g3_i1 69.60493987 13.58439574 125.625484 9.247778588 3.209106857 5.41E-20 1.76E-18 Up 1.372305 0.933837 1.814771 11.41336 9.286301 10.38345 KVH96181.1 Ankyrin repeat-containing protein [Cynara cardunculus var. scolymus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25105_c0_g4_i1 12.93063536 3.12089676 22.74037395 7.28648709 2.86522344 0.008811868 0.034287425 Up 0 1.720059 0 0.9550012 4.852058 4.773562 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25105_c0_g5_i1 24.88322054 6.046759237 43.71968183 7.23026668 2.85404886 0.000105747 0.000697192 Up 1.162367 0.5580349 0.4402373 6.292846 3.11945 3.183924 EPS71095.1 "hypothetical protein M569_03662, partial [Genlisea aurea]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25109_c1_g5_i2 17.80477771 9.340322918 26.26923249 2.812454422 1.491829717 0.011174982 0.041726243 Up 1.568869 1.576629 0.2425078 2.577604 3.108042 2.03919 KZV56379.1 "trigger factor-like protein TIG, Chloroplastic [Dorcoceras hygrometricum]" Q8S9L5|TIG_ARATH "Trigger factor-like protein TIG, Chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIG PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- O COG0544 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: protein transport (GO:0015031);|Molecular Function: ribosome binding (GO:0043022);|Biological Process: protein unfolding (GO:0043335);|Molecular Function: protein binding involved in protein folding (GO:0044183);|Biological Process: 'de novo' cotranslational protein folding (GO:0051083);|Biological Process: chaperone-mediated protein folding (GO:0061077); -- -- TRINITY_DN25112_c0_g2_i2 1792.930454 960.1146438 2625.746264 2.734825763 1.451448921 2.55E-72 4.51E-70 Up 22.88948 21.98562 23.37663 50.13477 49.77869 50.74234 XP_011096175.2 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Sesamum indicum] Q9SXB4|Y1130_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana OX=3702 GN=At1g11300 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16,PF01453.23,PF00954.19,PF08276.10" Protein kinase domain|Protein tyrosine kinase|D-mannose binding lectin|S-locus glycoprotein domain|PAN-like domain TRINITY_DN25115_c0_g2_i1 407.3140106 809.7382695 4.889751687 0.006038682 -7.371550649 1.13E-209 9.18E-207 Down 57.8755 63.79924 60.16068 0.1730975 0.173763 0.5248807 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25118_c0_g3_i1 44.57802792 59.72775924 29.4282966 0.492707193 -1.021197561 0.008238108 0.032418938 Down 9.321879 7.279754 8.579745 1.387804 4.421342 4.279074 -- -- -- -- -- -- -- -- -- -- KOG1502 Flavonol reductase/cinnamoyl-CoA reductase [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms -- -- -- -- -- -- TRINITY_DN25121_c0_g3_i1 53.63146972 88.30133972 18.96159972 0.214737396 -2.219354643 3.52E-09 4.71E-08 Down 8.855667 10.92066 8.849937 2.017125 1.29912 1.602426 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25121_c0_g4_i1 13.46847668 24.69288262 2.244070747 0.090879254 -3.459905201 0.000456064 0.002602073 Down 1.585181 4.957712 5.103908 0 0.4674078 0.4660381 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25122_c0_g1_i4 694.8926859 321.203346 1068.582026 3.326808513 1.734138829 6.99E-54 8.52E-52 Up 20.58178 19.75848 22.2717 56.15305 58.10961 53.6939 XP_011081961.1 probable WRKY transcription factor 40 [Sesamum indicum] Q6IEK5|WRK76_ORYSI WRKY transcription factor WRKY76 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY76 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YHES WRKY transcription factor Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to fungus (GO:0009620);|Biological Process: response to chitin (GO:0010200);|Molecular Function: sequence-specific DNA binding (GO:0043565); -- -- TRINITY_DN25126_c1_g1_i1 11.81051212 22.89655378 0.724470471 0.031641027 -4.982059773 3.68E-06 3.22E-05 Down 2.652951 1.979005 1.202022 0 0.1728182 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25126_c3_g1_i12 504.6407753 836.6704623 172.6110883 0.206307138 -2.277134359 3.38E-66 5.31E-64 Down 21.89138 23.40393 21.31961 3.815655 3.361414 3.925864 KNA23339.1 hypothetical protein SOVF_025630 isoform B [Spinacia oleracea] Q9FME0|RFA1D_ARATH Replication protein A 70 kDa DNA-binding subunit D OS=Arabidopsis thaliana OX=3702 GN=RPA1D PE=2 SV=1 ppp:PHYPADRAFT_223341 K07466 "RFA1, RPA1, rpa" replication factor A1 ko03430|ko03030|ko03440|ko03420 Mismatch repair|DNA replication|Homologous recombination|Nucleotide excision repair KOG0851 "Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " -- -- -- "Biological Process: telomere maintenance (GO:0000723);|Biological Process: double-strand break repair via homologous recombination (GO:0000724);|Cellular Component: nuclear chromosome, telomeric region (GO:0000784);|Molecular Function: damaged DNA binding (GO:0003684);|Molecular Function: single-stranded DNA binding (GO:0003697);|Molecular Function: helicase activity (GO:0004386);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: DNA replication factor A complex (GO:0005662);|Biological Process: DNA-dependent DNA replication (GO:0006261);|Biological Process: DNA unwinding involved in DNA replication (GO:0006268);|Biological Process: DNA repair (GO:0006281);|Biological Process: nucleotide-excision repair (GO:0006289);|Biological Process: telomere maintenance via telomerase (GO:0007004);|Molecular Function: single-stranded telomeric DNA binding (GO:0043047);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: meiotic cell cycle (GO:0051321);" PF08646.9 Replication factor-A C terminal domain TRINITY_DN25127_c1_g2_i1 6.402856469 12.80571294 0 0 #NAME? 0.000123769 0.000804333 Down 1.957939 2.202968 2.749063 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2512_c0_g1_i1 143.8012082 207.2791426 80.32327382 0.387512573 -1.367684976 8.50E-10 1.22E-08 Down 7.19118 6.824831 5.982288 1.821479 2.184557 2.262357 AAS86320.1 germacrene D synthase [Pogostemon cablin] Q49SP6|TPGD2_POGCB Germacrene D synthase 2 OS=Pogostemon cablin OX=28511 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBXH synthase Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: cytosol (GO:0005829);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate metabolic process (GO:0045338);|Biological Process: sesquiterpene biosynthetic process (GO:0051762); "PF03936.15,PF01397.20" "Terpene synthase family, metal binding domain|Terpene synthase, N-terminal domain" TRINITY_DN25145_c1_g1_i4 71.31572312 42.18393371 100.4475125 2.381179366 1.251676298 3.86E-05 0.00028009 Up 3.656977 2.267823 2.645529 5.133057 5.338359 5.947043 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25145_c1_g3_i6 922.0096524 590.1669125 1253.852392 2.124572499 1.087172575 4.14E-28 2.13E-26 Up 40.05607 35.04066 40.92509 64.56992 68.27795 66.1712 PIN19285.1 hypothetical protein CDL12_08034 [Handroanthus impetiginosus] Q9FZ95|PUP3_ARATH Purine permease 3 OS=Arabidopsis thaliana OX=3702 GN=PUP3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG410Y9BB purine permease Molecular Function: purine nucleobase transmembrane transporter activity (GO:0005345);|Biological Process: purine nucleobase transport (GO:0006863);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021); "PF16913.4,PF00892.19" Purine nucleobase transmembrane transport|EamA-like transporter family TRINITY_DN25145_c1_g6_i1 5.99334709 10.88416663 1.102527553 0.10129646 -3.303344333 0.012715562 0.046514427 Down 3.337183 1.577888 1.267871 0.480039 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25147_c0_g1_i1 50.59659818 83.75437287 17.43882349 0.208213887 -2.263861804 3.86E-09 5.14E-08 Down 8.584224 7.058985 10.04366 0.6620025 2.138365 1.598297 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25147_c0_g3_i17 76.05450469 146.5496247 5.55938467 0.037935168 -4.720320253 4.69E-33 2.93E-31 Down 12.16851 13.40829 16.13826 0.4878861 0.3841105 0.3490583 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25147_c0_g5_i1 43.36550034 77.43677205 9.294228633 0.120023451 -3.058611775 0.003749213 0.016558623 Down 19.68522 17.58182 4.136222 0.8397934 1.656024 1.584318 RAL40289.1 hypothetical protein DM860_006359 [Cuscuta australis] Q1PDV6|PBL27_ARATH Serine/threonine-protein kinase PBL27 OS=Arabidopsis thaliana OX=3702 GN=PBL27 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN25147_c0_g6_i1 38.1786773 72.23390565 4.123448942 0.057084674 -4.130752729 7.44E-07 7.28E-06 Down 19.99373 17.64432 7.926021 0.8181952 0.4401143 0.9841588 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25149_c0_g5_i3 46.01036212 18.30206783 73.7186564 4.027886745 2.010023119 7.07E-07 6.95E-06 Up 0.6882571 1.590397 0.5267634 2.165377 3.415627 3.606922 CAN82720.1 hypothetical protein VITISV_008042 [Vitis vinifera] O42644|PYRG_SCHPO CTP synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ura7 PE=3 SV=1 sind:105175925 K01937 "pyrG, CTPS" CTP synthase ko00240 Pyrimidine metabolism KOG2387 CTP synthase (UTP-ammonia lyase) [F] METABOLISM Nucleotide transport and metabolism F COG0504 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (By similarity) Molecular Function: CTP synthase activity (GO:0003883);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: 'de novo' pyrimidine nucleobase biosynthetic process (GO:0006207);|Biological Process: glutamine metabolic process (GO:0006541);|Biological Process: 'de novo' CTP biosynthetic process (GO:0044210); -- -- TRINITY_DN25150_c0_g1_i5 263.6461828 393.7986301 133.4937355 0.338989842 -1.560686051 1.75E-20 5.90E-19 Down 24.72243 24.04918 26.06998 5.038654 8.772152 6.69228 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25155_c0_g5_i2 22.92878378 7.387774641 38.46979291 5.20722339 2.3805143 3.61E-05 0.000263351 Up 0.000502969 2.405823 1.282992 6.463378 5.24074 3.763533 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2515_c0_g1_i1 11.65017138 5.698745489 17.60159727 3.088679307 1.626990086 0.033132566 0.102200774 Up 1.229225 2.322592 0 3.738136 1.254096 3.863673 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25168_c1_g4_i1 52.87774744 71.29947595 34.45601894 0.483257675 -1.049135451 0.004036141 0.017630151 Down 6.49655 5.14693 4.541258 2.247227 2.251091 1.806997 GAY45362.1 hypothetical protein CUMW_088930 [Citrus unshiu] Q9M2V7|AB16G_ARATH ABC transporter G family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCG16 PE=2 SV=2 -- -- -- -- -- -- KOG0061 "Transporter, ABC superfamily (Breast cancer resistance protein)" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1131 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: pollen wall assembly (GO:0010208);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: transmembrane transport (GO:0055085);" -- -- TRINITY_DN2516_c0_g1_i1 4.223649728 8.447299456 0 0 #NAME? 0.00318002 0.014360392 Down 2.260516 0.4314462 1.393835 1.44E-78 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25170_c0_g1_i1 70.86761486 97.24187319 44.49335653 0.45755347 -1.127987747 0.000248079 0.001509016 Down 3.355512 2.644685 3.332045 1.339861 1.111106 1.008206 XP_011083845.1 protein CYPRO4 [Sesamum indicum] P40781|CYPR4_CYNCA Protein CYPRO4 OS=Cynara cardunculus OX=4265 GN=CYPRO4 PE=2 SV=1 -- -- -- -- -- -- KOG2395 Protein involved in vacuole import and degradation [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U COG5167 vacuolar import and degradation protein -- PF08553.9 VID27 cytoplasmic protein TRINITY_DN25176_c1_g4_i2 769.3433477 503.6607984 1035.025897 2.05500587 1.039142515 4.26E-23 1.67E-21 Up 23.20514 25.60568 24.44322 40.57119 41.65693 39.26113 XP_011079383.1 uncharacterized protein LOC105162905 [Sesamum indicum] O82234|IF32_ARATH "Translation initiation factor IF3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IF3-2 PE=2 SV=1" sind:105162905 K02520 "infC, MTIF3" translation initiation factor IF-3 -- -- -- -- -- -- -- J COG0290 "IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins (By similarity)" Molecular Function: translation initiation factor activity (GO:0003743);|Cellular Component: chloroplast (GO:0009507);|Biological Process: chloroplast organization (GO:0009658);|Biological Process: ribosome disassembly (GO:0032790);|Molecular Function: ribosome binding (GO:0043022);|Biological Process: leaf development (GO:0048366); "PF05198.15,PF00707.21" "Translation initiation factor IF-3, N-terminal domain|Translation initiation factor IF-3, C-terminal domain" TRINITY_DN2517_c0_g1_i1 6.583911697 12.08111769 1.086705707 0.089950759 -3.474720734 0.005634389 0.023466539 Down 2.233854 2.183919 2.626936 0 0.5569749 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25183_c0_g2_i2 374.7913308 557.2862217 192.2964398 0.345058665 -1.535086432 1.15E-26 5.47E-25 Down 17.37107 16.88985 17.84878 4.559817 4.744718 5.215588 XP_009789460.1 PREDICTED: heat shock 70 kDa protein [Nicotiana sylvestris] P26413|HSP70_SOYBN Heat shock 70 kDa protein OS=Glycine max OX=3847 GN=HSP70 PE=3 SV=1 sind:105165268 K03283 HSPA1_8 heat shock 70kDa protein 1/2/6/8 ko04141|ko03040|ko04144 Protein processing in endoplasmic reticulum|Spliceosome|Endocytosis KOG0101 "Molecular chaperones HSP70/HSC70, HSP70 superfamily" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0443 Heat shock protein "Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: response to unfolded protein (GO:0006986);|Molecular Function: ATPase activity (GO:0016887);|Molecular Function: heat shock protein binding (GO:0031072);|Biological Process: cellular response to heat (GO:0034605);|Biological Process: cellular response to unfolded protein (GO:0034620);|Biological Process: protein refolding (GO:0042026);|Molecular Function: ATPase activity, coupled (GO:0042623);|Molecular Function: protein binding involved in protein folding (GO:0044183);|Molecular Function: unfolded protein binding (GO:0051082);|Biological Process: chaperone cofactor-dependent protein refolding (GO:0051085);|Molecular Function: misfolded protein binding (GO:0051787);" "PF00012.19,PF06723.12,PF10712.8" Hsp70 protein|MreB/Mbl protein|NAD-specific glutamate dehydrogenase TRINITY_DN25192_c0_g1_i1 29.83429649 16.72965636 42.93893661 2.566635899 1.359878651 0.004843918 0.020651823 Up 1.260173 1.592238 0.7915118 1.717819 3.508491 2.230992 XP_019080631.1 PREDICTED: uncharacterized protein LOC109123929 isoform X1 [Vitis vinifera] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN25192_c1_g2_i2 2546.074528 1688.191544 3403.957512 2.016333705 1.011734426 2.40E-44 2.21E-42 Up 49.35408 48.95332 47.50291 77.57875 81.28835 78.36675 PIN01822.1 putative transporter (major facilitator superfamily) [Handroanthus impetiginosus] Q8VZ80|PLT5_ARATH Polyol transporter 5 OS=Arabidopsis thaliana OX=3702 GN=PLT5 PE=1 SV=2 -- -- -- -- -- -- KOG0254 Predicted transporter (major facilitator superfamily) [R] POORLY CHARACTERIZED General function prediction only G ENOG410XNQK Transporter Molecular Function: carbohydrate:proton symporter activity (GO:0005351);|Molecular Function: galactose transmembrane transporter activity (GO:0005354);|Molecular Function: glucose transmembrane transporter activity (GO:0005355);|Molecular Function: myo-inositol transmembrane transporter activity (GO:0005365);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of plasma membrane (GO:0005887);|Biological Process: hexose transmembrane transport (GO:0008645);|Biological Process: lateral root formation (GO:0010311);|Molecular Function: monosaccharide transmembrane transporter activity (GO:0015145);|Molecular Function: D-xylose transmembrane transporter activity (GO:0015148);|Molecular Function: glycerol transmembrane transporter activity (GO:0015168);|Molecular Function: mannitol transmembrane transporter activity (GO:0015575);|Molecular Function: sorbitol transmembrane transporter activity (GO:0015576);|Molecular Function: D-ribose transmembrane transporter activity (GO:0015591); "PF00083.23,PF07690.15" Sugar (and other) transporter|Major Facilitator Superfamily TRINITY_DN25196_c0_g1_i1 10.42306662 3.821565844 17.0245674 4.454866956 2.155382347 0.010910394 0.040885294 Up 0.521539 0.07219197 0.2864885 0.9306241 1.207255 0.8366769 XP_011095154.1 "mannan endo-1,4-beta-mannosidase 6 isoform X1 [Sesamum indicum]" Q9LZV3|MAN6_ARATH "Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis thaliana OX=3702 GN=MAN6 PE=2 SV=1" sind:105174678 K19355 MAN "mannan endo-1,4-beta-mannosidase" ko00051 Fructose and mannose metabolism -- -- -- -- -- G COG3934 "Mannan endo-1,4-beta-mannosidase" "Cellular Component: extracellular region (GO:0005576);|Biological Process: seed germination (GO:0009845);|Molecular Function: mannan endo-1,4-beta-mannosidase activity (GO:0016985);|Biological Process: mannan catabolic process (GO:0046355);" -- -- TRINITY_DN25197_c0_g1_i5 90.76898673 122.852546 58.68542743 0.477689957 -1.065853549 0.000106551 0.000702185 Down 4.089966 5.167761 4.048105 1.954921 1.559292 1.641102 PIN01460.1 hypothetical protein CDL12_26029 [Handroanthus impetiginosus] F4KEW8|NET4A_ARATH Protein NETWORKED 4A OS=Arabidopsis thaliana OX=3702 GN=NET4A PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41117CB NA Cellular Component: vacuolar membrane (GO:0005774);|Molecular Function: actin filament binding (GO:0051015); PF07765.11 KIP1-like protein TRINITY_DN25200_c0_g2_i2 19.09271973 7.149494793 31.03594468 4.340998291 2.118026855 0.000494763 0.002797556 Up 0.6814404 0.556655 0.4108647 1.800982 2.59025 1.490942 XP_012844854.1 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Erythranthe guttata] Q9LZU4|CRK4_ARATH Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana OX=3702 GN=CRK4 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN25200_c0_g6_i1 9.675773537 4.545039994 14.80650708 3.257728667 1.703866448 0.03446763 0.105501627 Up 2.010583 0.1002583 8.99E-05 1.550774 2.493469 1.73212 XP_012844854.1 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Erythranthe guttata] Q9ZR08|Y4230_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana OX=3702 GN=At4g03230 PE=3 SV=3 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN25205_c1_g1_i2 16.61907573 25.79693129 7.441220182 0.288453696 -1.793588345 0.044425084 0.128921355 Down 2.511659 0.8385893 1.060787 0.2840256 0.3699877 0.3829368 XP_012857600.1 PREDICTED: putative late blight resistance protein homolog R1A-3 isoform X1 [Erythranthe guttata] Q6L400|R1B16_SOLDE Putative late blight resistance protein homolog R1B-16 OS=Solanum demissum OX=50514 GN=R1B-16 PE=3 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms -- -- -- Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Molecular Function: ADP binding (GO:0043531); -- -- TRINITY_DN25205_c1_g2_i1 39.16103159 20.60839254 57.71367064 2.800493563 1.485681112 0.000228214 0.001398399 Up 0.8302526 1.090099 0.3832252 1.847965 1.463871 1.917956 XP_012857600.1 PREDICTED: putative late blight resistance protein homolog R1A-3 isoform X1 [Erythranthe guttata] Q6L438|R1A6_SOLDE Putative late blight resistance protein homolog R1A-6 OS=Solanum demissum OX=50514 GN=R1A-6 PE=3 SV=2 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Molecular Function: ADP binding (GO:0043531); PF00931.21 NB-ARC domain TRINITY_DN25209_c0_g1_i1 39.1612295 77.58744063 0.735018369 0.009473419 -6.721899022 1.50E-20 5.07E-19 Down 3.355476 5.45975 5.521208 0.131335 0 2.06E-74 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25209_c0_g3_i3 60.54875942 98.07012431 23.02739454 0.234805398 -2.090462522 3.77E-09 5.03E-08 Down 14.22221 10.88216 8.909496 2.397291 2.037754 2.037675 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25212_c2_g1_i5 151.5699213 293.9503743 9.18946829 0.031261972 -4.999447416 2.74E-30 1.56E-28 Down 23.6524 19.20951 15.61291 0.1750902 0.9923447 0.2926283 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25215_c0_g2_i1 231.0543486 143.9016787 318.2070185 2.211280796 1.144882235 5.40E-11 8.87E-10 Up 6.523974 5.1805 5.755185 10.32281 9.530386 11.35194 XP_011076720.1 nematode resistance protein-like HSPRO2 [Sesamum indicum] O04203|HSPR2_ARATH Nematode resistance protein-like HSPRO2 OS=Arabidopsis thaliana OX=3702 GN=HSPRO2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YA6B arabidopsis ortholog of sugar beet hs1 pro-1 2 "Cellular Component: cytoplasm (GO:0005737);|Biological Process: response to oxidative stress (GO:0006979);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);|Biological Process: tryptophan catabolic process to kynurenine (GO:0019441);|Molecular Function: heme binding (GO:0020037);|Molecular Function: metal ion binding (GO:0046872);" "PF07014.11,PF07231.11" Hs1pro-1 protein C-terminus|Hs1pro-1 N-terminus TRINITY_DN25217_c0_g6_i1 2.778680525 5.55736105 0 0 #NAME? 0.02392445 0.078360815 Down 1.498427 0 1.812444 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25221_c0_g2_i1 93.42636882 41.518751 145.3339866 3.500442165 1.80753717 1.22E-08 1.53E-07 Up 2.353152 2.475953 2.659725 6.94872 8.674653 5.532441 XP_011093117.1 hevamine-A-like [Sesamum indicum] P23472|CHLY_HEVBR Hevamine-A OS=Hevea brasiliensis OX=3981 PE=1 SV=2 sind:105173150 K01183 E3.2.1.14 chitinase ko00520 Amino sugar and nucleotide sugar metabolism KOG4701 Chitinase [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis G ENOG4111GPA chitinase Biological Process: polysaccharide catabolic process (GO:0000272);|Molecular Function: lysozyme activity (GO:0003796);|Molecular Function: chitinase activity (GO:0004568);|Cellular Component: vacuole (GO:0005773);|Biological Process: chitin catabolic process (GO:0006032); PF00704.27 Glycosyl hydrolases family 18 TRINITY_DN25225_c0_g4_i1 12.96980438 24.85290306 1.086705707 0.043725504 -4.515381184 3.06E-06 2.72E-05 Down 3.011152 1.614224 1.784175 0 0.2381395 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25227_c0_g2_i1 6.764776953 11.34032065 2.18923326 0.193048621 -2.372963848 0.042835147 0.125284526 Down 2.563377 3.058617 0.886755 0.5062196 0.5148105 4.71E-45 XP_011091621.1 uncharacterized protein LOC105172002 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25233_c1_g1_i4 996.0258758 611.9134384 1380.138313 2.255446974 1.173413369 1.32E-30 7.60E-29 Up 27.03659 21.90382 23.8594 45.49154 45.8221 41.13977 AJD25199.1 cytochrome P450 CYP81Q43 [Salvia miltiorrhiza] Q6WNQ8|C81E8_MEDTR Cytochrome P450 81E8 OS=Medicago truncatula OX=3880 GN=CYP81E8 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN25242_c0_g3_i1 35.21886861 15.32215263 55.11558459 3.597117581 1.846841319 0.000136718 0.000881417 Up 0.7391719 0.8562048 0.6066749 1.572222 2.923126 1.795291 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25242_c0_g4_i2 74.77650948 104.6092073 44.94381162 0.429635333 -1.21881545 5.86E-05 0.000408048 Down 17.01465 18.75204 16.3627 4.034682 7.468225 6.526996 XP_012833514.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Erythranthe guttata] Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); PF08263.11 Leucine rich repeat N-terminal domain TRINITY_DN25244_c0_g1_i1 12.14383168 18.78065885 5.507004499 0.293227439 -1.769907984 0.026883679 0.086230274 Down 5.659177 2.133212 3.51054 0.8281958 1.300141 0.4209759 PIN04095.1 putative RNA-binding protein [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25245_c1_g1_i1 125.4989177 210.8010195 40.19681587 0.19068606 -2.390728714 1.77E-18 5.24E-17 Down 12.20455 10.75608 9.438658 2.766852 0.6800046 1.551007 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25246_c1_g1_i1 583.3503686 223.3725342 943.3282031 4.223116359 2.078307998 5.24E-65 7.98E-63 Up 9.703138 8.49868 9.58112 30.43326 30.99883 33.33592 XP_011100453.1 anthocyanidin 3-O-glucosyltransferase 2-like [Sesamum indicum] Q2V6K0|UFOG6_FRAAN UDP-glucose flavonoid 3-O-glucosyltransferase 6 OS=Fragaria ananassa OX=3747 GN=GT6 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: flavonol 3-O-glucosyltransferase activity (GO:0047893);|Molecular Function: daphnetin 3-O-glucosyltransferase activity (GO:0102360);|Molecular Function: myricetin 3-O-glucosyltransferase activity (GO:0102425); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN25250_c0_g4_i2 43.44530188 76.54586842 10.34473533 0.135144268 -2.887427776 5.04E-11 8.31E-10 Down 4.820982 3.800547 4.155695 0.8062694 0.3624969 0.2606205 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25255_c0_g1_i1 216.0958023 334.5071793 97.68442535 0.292024899 -1.77583671 3.11E-21 1.12E-19 Down 9.878141 9.605556 8.374797 2.243953 2.151992 2.147145 XP_011071829.1 U-box domain-containing protein 19 [Sesamum indicum] O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=PUB19 PE=2 SV=1 -- -- -- -- -- -- KOG0167 FOG: Armadillo/beta-catenin-like repeats [S] POORLY CHARACTERIZED Function unknown S ENOG410YFDU Ubox domain-containing protein Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: regulation of seed germination (GO:0010029); "PF04564.14,PF00514.22" U-box domain|Armadillo/beta-catenin-like repeat TRINITY_DN25256_c0_g1_i6 40.74464861 81.48929721 0 0 #NAME? 1.73E-17 4.78E-16 Down 5.405462 6.812076 9.907337 5.09E-51 1.55E-84 4.98E-89 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25256_c0_g4_i1 60.63004333 19.69140809 101.5686786 5.158020092 2.366817393 7.94E-12 1.42E-10 Up 1.442091 2.946808 1.16423 8.086063 6.964032 8.313971 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25257_c2_g2_i1 19.86764758 10.91741079 28.81788436 2.639626272 1.400333682 0.022733516 0.07518159 Up 4.317651 1.016992 0.6524614 3.680009 6.044828 3.374767 XP_011084721.1 probable UDP-arabinopyranose mutase 5 isoform X2 [Sesamum indicum] Q9FFD2|RGP5_ARATH Probable UDP-arabinopyranose mutase 5 OS=Arabidopsis thaliana OX=3702 GN=RGP5 PE=1 SV=1 sind:105166899 K13379 "RGP, UTM" reversibly glycosylated polypeptide / UDP-arabinopyranose mutase ko00520 Amino sugar and nucleotide sugar metabolism -- -- -- -- -- S ENOG410YC4P UDP-arabinopyranose mutase Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to salt stress (GO:0009651);|Biological Process: plant-type cell wall biogenesis (GO:0009832);|Biological Process: UDP-L-arabinose metabolic process (GO:0033356);|Molecular Function: UDP-arabinopyranose mutase activity (GO:0052691);|Biological Process: cell wall organization (GO:0071555); -- -- TRINITY_DN25258_c0_g1_i5 797.2109988 1126.701815 467.7201823 0.415123306 -1.268388165 2.28E-33 1.45E-31 Down 27.10419 27.1176 24.82272 8.35744 8.8201 9.317927 PNX87013.1 "remorin family protein, partial [Trifolium pratense]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25258_c0_g2_i1 49.36605565 66.56320267 32.16890862 0.483283666 -1.049057859 0.003636652 0.016122528 Down 5.162387 3.43693 5.335703 1.953281 1.067579 2.40054 XP_011092342.1 uncharacterized protein LOC105172555 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25258_c0_g3_i2 14.85467405 27.88762403 1.821724075 0.065323746 -3.93624866 8.35E-06 6.85E-05 Down 2.533302 1.064784 2.630441 0.112145 0.225256 0 PQP94091.1 uncharacterized protein Pyn_25910 [Prunus yedoensis var. nudiflora] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25262_c0_g3_i1 6.039803023 10.26842987 1.811176178 0.176382972 -2.503216805 0.036426046 0.110161869 Down 1.669842 1.648956 3.28263 0 0.9285556 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25263_c0_g1_i1 20.84761756 41.33299989 0.362235236 0.008763826 -6.834223378 1.96E-12 3.69E-11 Down 5.819051 4.568199 4.976503 0 0.1143831 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25263_c1_g1_i4 100.139347 143.897808 56.38088593 0.391811986 -1.351766563 4.16E-07 4.23E-06 Down 10.07873 12.69491 8.551786 3.461392 3.408278 3.007649 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25263_c2_g1_i15 461.7398176 772.3864003 151.0932348 0.195618715 -2.353883697 2.25E-65 3.46E-63 Down 14.52802 13.41726 15.05051 2.008024 2.520873 2.256313 XP_012839197.1 PREDICTED: phospholipase D delta-like isoform X1 [Erythranthe guttata] Q9C5Y0|PLDD1_ARATH Phospholipase D delta OS=Arabidopsis thaliana OX=3702 GN=PLDDELTA PE=1 SV=2 sly:101248969 K01115 PLD1_2 phospholipase D1/2 ko00564|ko04144|ko00565 Glycerophospholipid metabolism|Endocytosis|Ether lipid metabolism KOG1329 Phospholipase D1 [I] METABOLISM Lipid transport and metabolism I COG1502 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity) Molecular Function: phospholipase D activity (GO:0004630);|Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: vacuole (GO:0005773);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to cold (GO:0009409);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);|Biological Process: programmed cell death (GO:0012501);|Cellular Component: membrane (GO:0016020);|Biological Process: lipid catabolic process (GO:0016042);|Biological Process: phosphatidylcholine metabolic process (GO:0046470);|Biological Process: phosphatidic acid metabolic process (GO:0046473);|Molecular Function: N-acylphosphatidylethanolamine-specific phospholipase D activity (GO:0070290);|Biological Process: regulation of stomatal closure (GO:0090333); "PF00168.29,PF12357.7" C2 domain|Phospholipase D C terminal TRINITY_DN25264_c0_g1_i2 77.8936346 108.166133 47.62113626 0.44025921 -1.18357491 5.67E-05 0.000396537 Down 3.250218 3.912741 3.676544 1.094749 1.336841 1.425417 XP_020550152.1 homeobox protein ATH1-like [Sesamum indicum] P48731|ATH1_ARATH Homeobox protein ATH1 OS=Arabidopsis thaliana OX=3702 GN=ATH1 PE=1 SV=1 -- -- -- -- -- -- KOG0773 Transcription factor MEIS1 and related HOX domain proteins [K] INFORMATION STORAGE AND PROCESSING Transcription K ENOG410XPMQ homeobox Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: negative regulation of cell proliferation (GO:0008285);|Biological Process: photomorphogenesis (GO:0009640);|Biological Process: floral organ abscission (GO:0010227);|Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);|Biological Process: regulation of gibberellin biosynthetic process (GO:0010371);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: shoot organ boundary specification (GO:0090470); "PF07526.10,PF05920.10,PF00046.28" Associated with HOX|Homeobox KN domain|Homeobox domain TRINITY_DN25291_c1_g2_i1 25.11808713 48.04166705 2.194507208 0.045679248 -4.452317299 1.15E-10 1.83E-09 Down 2.400783 3.086977 4.453065 0.2509756 0.1220244 3.94E-61 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25295_c2_g1_i1 20.28388733 9.185416593 31.38235807 3.416541618 1.772536701 0.003370516 0.015100459 Up 1.65138 0.357871 1.288491 2.482573 4.379505 2.25973 XP_012843682.1 PREDICTED: (-)-isopiperitenone reductase-like [Erythranthe guttata] Q6WAU1|IPIPR_MENPI (-)-isopiperitenone reductase OS=Mentha piperita OX=34256 PE=1 SV=1 sind:105174344 K15095 E1.1.1.208 (+)-neomenthol dehydrogenase ko00902 Monoterpenoid biosynthesis KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " S COG1028 Dehydrogenase reductase Cellular Component: cytoplasm (GO:0005737);|Biological Process: menthol biosynthetic process (GO:0031525);|Biological Process: terpene metabolic process (GO:0042214);|Molecular Function: (-)-isopiperitenone reductase activity (GO:0052581);|Molecular Function: NADPH binding (GO:0070402); -- -- TRINITY_DN25302_c0_g2_i8 88.45488092 140.8058292 36.10393267 0.256409361 -1.963479162 8.33E-12 1.49E-10 Down 3.865921 3.410703 3.873837 0.8433154 0.6508213 0.8318315 KZV34052.1 "dihydroxy-acid dehydratase, mitochondrial-like [Dorcoceras hygrometricum]" Q9LIR4|ILVD_ARATH "Dihydroxy-acid dehydratase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DHAD PE=1 SV=1" sind:105158638 K01687 ilvD dihydroxy-acid dehydratase ko00770|ko00290 "Pantothenate and CoA biosynthesis|Valine, leucine and isoleucine biosynthesis" KOG2448 Dihydroxy-acid dehydratase [E] METABOLISM Amino acid transport and metabolism E COG0129 Dihydroxy-acid dehydratase "Molecular Function: dihydroxy-acid dehydratase activity (GO:0004160);|Molecular Function: copper ion binding (GO:0005507);|Cellular Component: intracellular (GO:0005622);|Biological Process: branched-chain amino acid biosynthetic process (GO:0009082);|Biological Process: isoleucine biosynthetic process (GO:0009097);|Biological Process: valine biosynthetic process (GO:0009099);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid (GO:0009536);|Biological Process: embryo sac development (GO:0009553);|Biological Process: pollen development (GO:0009555);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: response to salt stress (GO:0009651);|Molecular Function: hydro-lyase activity (GO:0016836);|Biological Process: root development (GO:0048364);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);" -- -- TRINITY_DN25309_c0_g2_i2 25.97125478 48.98697356 2.955536004 0.060333101 -4.050906463 2.14E-10 3.29E-09 Down 5.228916 3.472264 3.379048 0.159427 0.318396 0.1634203 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25309_c1_g3_i1 73.30200143 114.9882117 31.61579118 0.274948107 -1.862768739 4.16E-09 5.51E-08 Down 18.99833 16.83044 14.3781 4.599808 2.848107 3.791979 KZV46859.1 hypothetical protein F511_08620 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- O ENOG41121N2 zinc ion binding -- -- -- TRINITY_DN25309_c1_g4_i1 83.29262824 114.1847621 52.40049433 0.458909695 -1.12371781 8.36E-05 0.000563803 Down 20.95152 16.51473 18.63581 4.034516 9.06226 7.751975 PIN17997.1 hypothetical protein CDL12_09336 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25313_c0_g6_i1 7.374690458 14.74938092 0 0 #NAME? 4.14E-05 0.000297722 Down 4.257276 3.448443 1.115467 8.24E-71 1.58E-10 0.001223269 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25313_c0_g7_i1 31.68061221 19.67636222 43.68486219 2.220169648 1.15066992 0.010738234 0.040341027 Up 3.078678 1.98303 2.099765 4.250386 4.988349 3.513031 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25316_c0_g1_i7 510.4577584 319.8066146 701.1089021 2.192290184 1.132438775 7.48E-20 2.42E-18 Up 10.42652 12.6544 11.86799 20.13452 20.23791 21.44436 XP_012828120.1 PREDICTED: serine carboxypeptidase-like 45 [Erythranthe guttata] Q93Y09|SCP45_ARATH Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana OX=3702 GN=SCPL45 PE=2 SV=1 sind:105159930 K16297 SCPL-II serine carboxypeptidase-like clade II -- -- KOG1282 Serine carboxypeptidases (lysosomal cathepsin A) [OE] CELLULAR PROCESSES AND SIGNALING|METABOLISM "Posttranslational modification, protein turnover, chaperones |Amino acid transport and metabolism " E COG2939 carboxy-peptidase Molecular Function: serine-type carboxypeptidase activity (GO:0004185);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: vacuole (GO:0005773);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603); PF00450.21 Serine carboxypeptidase TRINITY_DN25317_c0_g1_i1 39.21543306 75.43877179 2.992094329 0.039662554 -4.656078624 2.85E-12 5.30E-11 Down 15.15181 10.68997 20.13629 0.00563508 0.7478326 0.7603188 XP_021862665.1 uncharacterized protein LOC110801607 [Spinacia oleracea] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111ABM NA -- -- -- TRINITY_DN25317_c1_g5_i1 11.50921085 19.01273831 4.005683386 0.210684191 -2.246846033 0.006753776 0.0274094 Down 2.693392 3.173317 4.107941 0.5472294 1.117611 5.44E-42 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25317_c1_g6_i1 23.7643648 46.79371123 0.735018369 0.015707631 -5.992390539 2.57E-13 5.21E-12 Down 2.747832 4.924165 4.726992 0.1582172 8.99E-114 2.32E-31 OIT39990.1 hypothetical protein A4A49_26434 [Nicotiana attenuata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111ABM NA -- -- -- TRINITY_DN25318_c0_g1_i10 1148.351474 1662.112561 634.590387 0.38179748 -1.389120515 1.10E-50 1.22E-48 Down 38.35935 37.38302 35.25124 10.90021 10.41704 12.91739 GAY53540.1 hypothetical protein CUMW_149880 [Citrus unshiu] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG2862 UPF0114 protein -- -- -- TRINITY_DN25321_c0_g2_i1 23.29592759 36.50531338 10.0865418 0.276303389 -1.855674837 0.001592315 0.007877067 Down 10.37193 7.629673 5.240045 0 2.595306 2.675252 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25322_c0_g4_i2 17.72577568 26.52728923 8.924262133 0.336418171 -1.571672461 0.014748187 0.052655692 Down 3.388731 2.05828 2.155751 0.6579098 0.6646154 0.6905446 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25326_c0_g1_i3 232.7660711 322.7947615 142.7373806 0.44219237 -1.177253964 2.14E-11 3.67E-10 Down 9.738484 9.9147 9.783411 3.71901 3.663022 3.106389 XP_011095121.1 protein NRT1/ PTR FAMILY 4.4 [Sesamum indicum] Q56XQ6|PTR15_ARATH Protein NRT1/ PTR FAMILY 4.4 OS=Arabidopsis thaliana OX=3702 GN=NPF4.4 PE=2 SV=1 -- -- -- -- -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Molecular Function: peptide:proton symporter activity (GO:0015333);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oligopeptide transmembrane transporter activity (GO:0035673);|Molecular Function: peptide transmembrane transporter activity (GO:1904680); PF00854.20 POT family TRINITY_DN25331_c0_g1_i7 1277.893542 567.2079519 1988.579133 3.505908417 1.80978831 4.61E-26 2.13E-24 Up 30.76743 28.51164 36.7532 96.80293 95.20481 79.35118 PIN21369.1 hypothetical protein CDL12_05914 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- K ENOG41116A7 WRKY transcription factor -- -- -- TRINITY_DN25345_c0_g1_i1 56.6793805 79.33563662 34.02312437 0.428850461 -1.221453422 0.000376757 0.00219427 Down 1.423884 1.925593 2.011231 0.6767207 0.7065113 0.4622551 PIN26986.1 Kinesin (SMY1 subfamily) [Handroanthus impetiginosus] F4JDI6|KN12F_ARATH Kinesin-like protein KIN-12F OS=Arabidopsis thaliana OX=3702 GN=KIN12F PE=3 SV=1 sind:105176613 K10400 KIF15 kinesin family member 15 -- -- -- -- -- -- -- Z COG5059 Kinesin family member "Molecular Function: microtubule motor activity (GO:0003777);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: kinesin complex (GO:0005871);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based movement (GO:0007018);|Molecular Function: microtubule binding (GO:0008017);|Molecular Function: ATP-dependent microtubule motor activity, plus-end-directed (GO:0008574);|Molecular Function: ATPase activity (GO:0016887);" PF00225.22 Kinesin motor domain TRINITY_DN25354_c0_g1_i1 712.9077433 475.215361 950.6001255 2.000356478 1.000257121 3.36E-20 1.11E-18 Up 17.86512 19.42875 19.90189 29.40602 31.26207 31.68895 XP_011098519.1 uncharacterized protein LOC105177167 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4112AH6 NA -- -- -- TRINITY_DN25360_c1_g3_i1 150.8698214 86.49553569 215.2441071 2.488499613 1.315276163 1.84E-05 0.00014222 Up 10.76818 17.44106 15.66856 31.79864 21.63265 34.67689 XP_011096175.2 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Sesamum indicum] Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN25374_c0_g1_i8 382.3329909 668.5083567 96.15762519 0.143839077 -2.797472424 1.24E-73 2.28E-71 Down 29.59468 28.80379 31.00062 2.741287 3.450919 4.200937 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25374_c0_g2_i1 13.50498716 19.8891571 7.12081722 0.358025088 -1.48186741 0.040445546 0.119699093 Down 3.290729 3.208391 3.54345 0.7650098 0.7564756 1.465244 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25379_c0_g1_i1 5.823104964 11.64620993 0 0 #NAME? 0.000339877 0.002005461 Down 1.195044 2.156973 0.9009888 4.01E-19 3.75E-55 1.39E-37 XP_022890675.1 E3 ubiquitin-protein ligase BRE1-like 2 isoform X3 [Olea europaea var. sylvestris] A2ZAC2|BRE1B_ORYSI E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica OX=39946 GN=BRE1B PE=3 SV=2 pmum:103319438 K10696 BRE1 E3 ubiquitin-protein ligase BRE1 -- -- KOG0978 E3 ubiquitin ligase involved in syntaxin degradation [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " K ENOG410Y5C6 e3 ubiquitin protein ligase Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: nucleus (GO:0005634);|Biological Process: leaf morphogenesis (GO:0009965);|Biological Process: seed dormancy process (GO:0010162);|Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);|Biological Process: histone monoubiquitination (GO:0010390);|Biological Process: histone H2B ubiquitination (GO:0033523);|Molecular Function: protein homodimerization activity (GO:0042803);|Biological Process: innate immune response (GO:0045087);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN25380_c0_g2_i1 18.97460135 7.328362108 30.6208406 4.178401688 2.062951192 0.010803364 0.040548791 Up 1.933538 0.643188 0.1203425 4.281135 1.254507 3.416295 PIN06492.1 hypothetical protein CDL12_20947 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YFIR NA -- -- -- TRINITY_DN25384_c1_g3_i2 66.80062027 105.8356016 27.76563898 0.262346872 -1.930452508 7.43E-09 9.52E-08 Down 5.81983 6.092814 4.683179 1.50046 1.080795 0.9006604 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25392_c1_g1_i1 26.09794272 52.19588543 0 0 #NAME? 6.30E-17 1.68E-15 Down 6.293923 6.070938 5.658236 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25393_c1_g6_i2 95.31727289 54.60315226 136.0313935 2.491273634 1.316883491 0.014447021 0.051788173 Up 2.1151 6.991 11.00681 9.860379 12.46718 18.29568 EYU34486.1 hypothetical protein MIMGU_mgv1a023861mg [Erythranthe guttata] Q9SJL0|U86A1_ARATH UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana OX=3702 GN=UGT86A1 PE=2 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); -- -- TRINITY_DN25396_c0_g1_i3 46.41964043 83.95685101 8.882429859 0.105797559 -3.24062176 1.86E-13 3.82E-12 Down 4.408514 5.677485 3.478583 0.4103926 0.4094153 0.3026558 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25400_c0_g5_i1 19.83213392 38.57756213 1.086705707 0.028169372 -5.149728778 3.38E-08 3.98E-07 Down 3.882298 2.782438 1.698259 0 0.1910438 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25407_c0_g1_i2 427.3804591 280.2029987 574.5579196 2.050505963 1.035979939 7.55E-15 1.73E-13 Up 9.882667 9.627474 9.915158 15.47864 15.46954 17.79965 XP_011092518.1 NADP-dependent malic enzyme-like isoform X1 [Sesamum indicum] P51615|MAOX_VITVI NADP-dependent malic enzyme OS=Vitis vinifera OX=29760 PE=2 SV=1 sind:105172655 K00029 "E1.1.1.40, maeB" malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) ko00710|ko00620 Carbon fixation in photosynthetic organisms|Pyruvate metabolism KOG1257 NADP+-dependent malic enzyme [C] METABOLISM Energy production and conversion C COG0281 malic enzyme Molecular Function: malate dehydrogenase (decarboxylating) (NAD+) activity (GO:0004471);|Molecular Function: malate dehydrogenase (decarboxylating) (NADP+) activity (GO:0004473);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: oxaloacetate decarboxylase activity (GO:0008948);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: NAD binding (GO:0051287); "PF03949.14,PF00390.18" "Malic enzyme, NAD binding domain|Malic enzyme, N-terminal domain" TRINITY_DN25417_c0_g1_i5 82.0800772 113.745178 50.41497643 0.443227373 -1.173881112 5.26E-05 0.0003712 Down 6.140619 6.856127 5.863689 2.602106 2.205978 1.919459 XP_011095611.1 probable galactinol--sucrose galactosyltransferase 1 [Sesamum indicum] Q84VX0|RFS1_ARATH Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RFS1 PE=2 SV=1 sind:105175014 K06617 E2.4.1.82 raffinose synthase ko00052 Galactose metabolism -- -- -- -- -- S ENOG410YBU9 raffinose synthase Biological Process: raffinose family oligosaccharide biosynthetic process (GO:0010325);|Molecular Function: galactinol-sucrose galactosyltransferase activity (GO:0047274); -- -- TRINITY_DN25423_c0_g2_i3 13.10118339 23.2622933 2.940073475 0.126387946 -2.984069216 0.000313226 0.00186152 Down 2.797869 3.270644 2.275351 0.8368084 7.50E-65 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25428_c0_g1_i1 444.3738214 604.3708111 284.3768316 0.470533696 -1.087630053 8.66E-17 2.29E-15 Down 25.91606 23.89592 27.15952 9.272371 9.758597 10.17465 XP_011095949.1 cytochrome b561 and DOMON domain-containing protein At4g17280 [Sesamum indicum] Q8VYH6|B651B_ARATH Cytochrome b561 and DOMON domain-containing protein At4g17280 OS=Arabidopsis thaliana OX=3702 GN=At4g17280 PE=2 SV=1 -- -- -- -- -- -- KOG4293 "Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains" [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XR70 Ferric-chelate reductase Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: oxidation-reduction process (GO:0055114); "PF04526.12,PF03188.15" Protein of unknown function (DUF568)|Eukaryotic cytochrome b561 TRINITY_DN25429_c0_g1_i6 123.3186167 69.05876416 177.5784692 2.57141105 1.362560249 5.99E-09 7.77E-08 Up 2.58786 3.056165 2.550355 5.394626 6.411207 5.183036 PIN19692.1 hypothetical protein CDL12_07620 [Handroanthus impetiginosus] Q8S8P5|WRK33_ARATH Probable WRKY transcription factor 33 OS=Arabidopsis thaliana OX=3702 GN=WRKY33 PE=1 SV=2 sly:101268787 K13424 WRKY33 WRKY transcription factor 33 ko04626 Plant-pathogen interaction -- -- -- -- -- K ENOG4112BTF WRKY transcription factor Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to heat (GO:0009408);|Biological Process: response to cold (GO:0009409);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to salt stress (GO:0009651);|Biological Process: camalexin biosynthetic process (GO:0010120);|Biological Process: response to chitin (GO:0010200);|Biological Process: positive regulation of autophagy (GO:0010508);|Biological Process: cellular response to heat (GO:0034605);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: defense response to fungus (GO:0050832);|Biological Process: cellular heat acclimation (GO:0070370); PF03106.14 WRKY DNA -binding domain TRINITY_DN2542_c0_g1_i1 8.292577158 16.58515432 0 0 #NAME? 7.98E-06 6.58E-05 Down 1.185042 2.58389 2.249802 0 0 0 XP_011078450.2 aluminum-activated malate transporter 12 [Sesamum indicum] O49696|ALMTC_ARATH Aluminum-activated malate transporter 12 OS=Arabidopsis thaliana OX=3702 GN=ALMT12 PE=2 SV=1 -- -- -- -- -- -- KOG4711 Predicted membrane protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410XR8V aluminum-activated malate transporter Cellular Component: plasma membrane (GO:0005886);|Biological Process: sulfate transport (GO:0008272);|Molecular Function: anion transmembrane transporter activity (GO:0008509);|Cellular Component: plant-type vacuole membrane (GO:0009705);|Biological Process: stomatal movement (GO:0010118);|Cellular Component: endomembrane system (GO:0012505);|Biological Process: malate transport (GO:0015743);|Cellular Component: integral component of membrane (GO:0016021); "PF11744.7,PF13515.5" Aluminium activated malate transporter|Fusaric acid resistance protein-like TRINITY_DN25432_c1_g1_i1 21.04422047 8.507149693 33.58129124 3.947419811 1.980909959 0.000875542 0.004637514 Up 1.225056 0.6026918 1.41767 3.872814 2.39807 4.091332 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25432_c1_g4_i2 14.10315849 28.20631698 0 0 #NAME? 2.27E-09 3.11E-08 Down 4.491531 3.815715 2.814859 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25432_c1_g5_i1 13.88722179 25.84550184 1.928941734 0.074633557 -3.744031745 8.04E-06 6.62E-05 Down 5.089641 3.969499 6.387756 0 0 1.032902 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25436_c2_g2_i2 13.48295457 22.19392301 4.771986131 0.215013188 -2.217502947 0.003977863 0.017402382 Down 3.593706 3.556686 3.122072 0.439756 1.067409 0.3652247 XP_012841434.1 PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25449_c0_g1_i2 146.7557035 206.4759387 87.03546822 0.421528381 -1.246298325 8.50E-09 1.08E-07 Down 6.085637 6.752991 6.986554 2.448837 1.955799 2.351556 PIN18609.1 hypothetical protein CDL12_08712 [Handroanthus impetiginosus] Q8GYX3|MP705_ARATH Microtubule-associated protein 70-5 OS=Arabidopsis thaliana OX=3702 GN=MAP70.5 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41113GC Myosin II heavy chain-like Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874);|Biological Process: cytoskeleton organization (GO:0007010);|Molecular Function: microtubule binding (GO:0008017);|Biological Process: plant-type cell wall biogenesis (GO:0009832);|Biological Process: xylem and phloem pattern formation (GO:0010051);|Biological Process: cell wall organization (GO:0071555); PF07058.10 Microtubule-associated protein 70 TRINITY_DN25451_c1_g1_i3 68.11123798 132.878335 3.344140984 0.025166939 -5.31232642 5.92E-33 3.68E-31 Down 9.279917 10.50232 12.00524 0.5232556 0 0.1830449 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25451_c2_g1_i5 136.0372807 267.7066428 4.367918621 0.016316064 -5.93756315 6.26E-32 3.74E-30 Down 12.41148 8.563059 12.95714 0.1475614 0.290679 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25451_c2_g2_i1 57.42504304 114.8500861 0 0 #NAME? 3.09E-11 5.21E-10 Down 7.655495 20.02511 12.45516 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25451_c2_g3_i1 15.39912431 30.79824863 0 0 #NAME? 0.004026539 0.01759329 Down 1.727627 2.247971 9.487007 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25455_c0_g2_i11 220.64207 348.623413 92.66072694 0.265790316 -1.911639556 1.37E-24 5.84E-23 Down 7.489856 6.338851 6.741311 1.337792 1.739559 1.337348 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25458_c0_g2_i2 228.8959895 108.5385106 349.2534684 3.217783868 1.686067426 3.75E-21 1.34E-19 Up 11.52509 12.32472 11.66291 31.43656 31.41104 29.24756 XP_012827703.1 PREDICTED: uncharacterized protein LOC105948987 [Erythranthe guttata] Q9C9T2|SARD1_ARATH Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana OX=3702 GN=SARD1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y9AX calmodulin binding "Biological Process: defense response to oomycetes (GO:0002229);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: response to bacterium (GO:0009617);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: regulation of systemic acquired resistance (GO:0010112);|Biological Process: response to UV-B (GO:0010224);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: cellular response to molecule of bacterial origin (GO:0071219);|Biological Process: regulation of salicylic acid biosynthetic process (GO:0080142);|Biological Process: positive regulation of defense response to bacterium (GO:1900426);" PF07887.10 Calmodulin binding protein-like TRINITY_DN25461_c0_g1_i12 157.7266931 243.059424 72.39396227 0.297844704 -1.747367787 3.04E-10 4.58E-09 Down 5.301197 5.619407 7.497653 1.167655 1.767424 1.509936 XP_002313004.2 "amidophosphoribosyltransferase, chloroplastic [Populus trichocarpa]" Q9STG9|ASE2_ARATH "Amidophosphoribosyltransferase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ASE2 PE=1 SV=1" pop:POPTR_0009s12850g K00764 "purF, PPAT" amidophosphoribosyltransferase ko00230|ko00250 "Purine metabolism|Alanine, aspartate and glutamate metabolism" KOG0572 Glutamine phosphoribosylpyrophosphate amidotransferase [F] METABOLISM Nucleotide transport and metabolism F COG0034 glutamine phosphoribosylpyrophosphate amidotransferase Molecular Function: amidophosphoribosyltransferase activity (GO:0004044);|Biological Process: purine nucleotide biosynthetic process (GO:0006164);|Biological Process: 'de novo' IMP biosynthetic process (GO:0006189);|Biological Process: glutamine metabolic process (GO:0006541);|Biological Process: purine nucleobase biosynthetic process (GO:0009113);|Biological Process: nucleoside metabolic process (GO:0009116);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid stroma (GO:0009532);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: chloroplast organization (GO:0009658);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: iron-sulfur cluster binding (GO:0051536); -- -- TRINITY_DN25461_c0_g5_i1 12.27790132 20.48473387 4.071068771 0.198736718 -2.331069653 0.003834487 0.01687598 Down 1.38412 3.173729 2.318419 0.261836 0.5242019 0.2794795 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2548_c0_g1_i1 30.07768223 45.39524497 14.76011949 0.325146819 -1.620836786 0.007375634 0.029521397 Down 10.09668 8.238139 5.491806 4.561167 0.9207168 0.8688216 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25491_c1_g2_i1 17.08008134 26.02857304 8.131589644 0.312410121 -1.678486904 0.009569876 0.036737356 Down 1.225207 1.863509 1.889775 0.2202575 0.6646908 0.3474997 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25491_c1_g3_i2 191.2827678 263.1991036 119.366432 0.453521423 -1.140757394 2.27E-09 3.10E-08 Down 22.24239 24.24702 22.80202 8.803355 6.482243 10.05424 XP_011100507.1 switch-associated protein 70 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41114AA Domain-Containing protein -- -- -- TRINITY_DN25492_c1_g3_i1 16.42292252 23.80381735 9.042027689 0.379856204 -1.396474712 0.031592502 0.098325572 Down 4.972759 3.38231 4.229439 1.219439 0.4144736 2.125296 XP_011097959.2 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25492_c1_g5_i2 62.82878388 35.85901236 89.7985554 2.504211619 1.324356483 7.50E-05 0.00051087 Up 1.582193 1.646337 2.173405 3.559779 3.117122 4.155997 XP_020554436.1 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Sesamum indicum] O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF01453.23,PF00954.19,PF08276.10" D-mannose binding lectin|S-locus glycoprotein domain|PAN-like domain TRINITY_DN25507_c0_g1_i1 18.86523729 31.73819533 5.99227924 0.188803402 -2.405043337 0.000207414 0.001285697 Down 3.33506 1.746944 2.16993 0.3905806 0.1967905 0.5236311 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25509_c0_g2_i1 20.86076443 31.29312899 10.42839988 0.33324887 -1.585328111 0.005442582 0.022791063 Down 1.741863 2.74201 3.342905 1.065781 0.3432503 0.7127999 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2550_c0_g1_i1 6.125552352 12.2511047 0 0 #NAME? 0.000240786 0.001467968 Down 3.225652 3.083374 0.9977939 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25517_c0_g1_i5 616.2724626 399.9659304 832.5789948 2.081624787 1.057710046 2.66E-20 8.85E-19 Up 14.15135 14.02597 14.25242 22.85267 23.81149 24.65092 PIN15760.1 AAA+-type ATPase [Handroanthus impetiginosus] Q8GW96|AATP3_ARATH AAA-ATPase At2g18193 OS=Arabidopsis thaliana OX=3702 GN=At2g18193 PE=2 SV=1 -- -- -- -- -- -- KOG0743 AAA+-type ATPase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0465 "Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)" Molecular Function: ATP binding (GO:0005524);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887); "PF14363.5,PF00004.28" Domain associated at C-terminal with AAA|ATPase family associated with various cellular activities (AAA) TRINITY_DN25525_c1_g2_i2 204.730802 79.82547251 329.6361316 4.129460449 2.045953293 1.31E-26 6.26E-25 Up 3.362858 3.632433 3.409965 10.93038 11.83226 11.95279 XP_011069658.1 spermidine hydroxycinnamoyl transferase-like [Sesamum indicum] O64470|SHT_ARATH Spermidine hydroxycinnamoyl transferase OS=Arabidopsis thaliana OX=3702 GN=SHT PE=1 SV=1 sind:105155477 K13065 "E2.3.1.133, HCT" shikimate O-hydroxycinnamoyltransferase ko00940|ko00945|ko00941 "Phenylpropanoid biosynthesis|Stilbenoid, diarylheptanoid and gingerol biosynthesis|Flavonoid biosynthesis" -- -- -- -- -- S ENOG410YUQM shikimate quinate hydroxycinnamoyltransferase-like Biological Process: pollen development (GO:0009555);|Biological Process: pollen exine formation (GO:0010584);|Molecular Function: N-acyltransferase activity (GO:0016410);|Molecular Function: spermidine:sinapoyl CoA N-acyltransferase activity (GO:0080072);|Molecular Function: spermidine:coumaroyl CoA N-acyltransferase activity (GO:0080073);|Molecular Function: spermidine:caffeoyl CoA N-acyltransferase activity (GO:0080074);|Molecular Function: spermidine:feruloyl CoA N-acyltransferase activity (GO:0080075);|Biological Process: spermidine hydroxycinnamate conjugate biosynthetic process (GO:0080088); PF02458.14 Transferase family TRINITY_DN25525_c1_g3_i1 3.291803437 6.583606874 0 0 #NAME? 0.036827231 0.111110308 Down 0 2.496235 1.187099 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25525_c1_g4_i1 5.778573115 10.45461868 1.102527553 0.105458419 -3.245253826 0.013206603 0.048066654 Down 1.635869 0.7044085 1.894505 0.327193 0 0 XP_022845483.1 spermidine hydroxycinnamoyl transferase-like [Olea europaea var. sylvestris] Q6K638|HCT2_ORYSJ Hydroxycinnamoyltransferase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=HCT2 PE=2 SV=1 sind:105166275 K13065 "E2.3.1.133, HCT" shikimate O-hydroxycinnamoyltransferase ko00940|ko00945|ko00941 "Phenylpropanoid biosynthesis|Stilbenoid, diarylheptanoid and gingerol biosynthesis|Flavonoid biosynthesis" -- -- -- -- -- S ENOG410XNR7 BAHD family acyltransferase "Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);" -- -- TRINITY_DN2552_c0_g1_i1 9.517271086 15.02358484 4.010957335 0.266977381 -1.905210576 0.03948092 0.117349229 Down 2.484308 2.466761 1.93108 0.7328702 0.7401727 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25532_c0_g1_i4 1516.488821 867.9825078 2164.995134 2.494284291 1.318625908 1.78E-55 2.26E-53 Up 33.60605 34.57374 33.81367 71.17554 69.0633 65.02147 KCW60162.1 hypothetical protein EUGRSUZ_H02886 [Eucalyptus grandis] P54144|AMT11_ARATH Ammonium transporter 1 member 1 OS=Arabidopsis thaliana OX=3702 GN=AMT1-1 PE=1 SV=1 egr:104414401 K03320 "amt, AMT, MEP" "ammonium transporter, Amt family" -- -- KOG0682 Ammonia permease [P] METABOLISM Inorganic ion transport and metabolism P COG0004 ammonium Transporter Cellular Component: nucleus (GO:0005634);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of plasma membrane (GO:0005887);|Molecular Function: ammonium transmembrane transporter activity (GO:0008519);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: lateral root formation (GO:0010311);|Biological Process: ammonium transport (GO:0015696);|Molecular Function: protein self-association (GO:0043621);|Biological Process: protein polymerization (GO:0051258);|Biological Process: ammonium transmembrane transport (GO:0072488);|Biological Process: response to karrikin (GO:0080167);|Biological Process: lateral root branching (GO:0080181); PF00909.20 Ammonium Transporter Family TRINITY_DN25533_c1_g1_i2 26.92699208 36.36769513 17.48628903 0.480819281 -1.056433345 0.032527074 0.100764449 Down 3.223556 5.200172 4.981418 1.77604 1.579157 1.84538 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25536_c0_g2_i1 27.67129946 53.88311009 1.45948884 0.027086203 -5.20629804 3.29E-11 5.54E-10 Down 5.128372 3.217209 2.76588 0.1447026 0.1423257 1.39E-37 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25553_c0_g1_i7 40.39340382 80.05178928 0.735018369 0.009181786 -6.767009535 3.58E-23 1.41E-21 Down 3.615405 4.331631 4.143044 0.07735064 0 0 XP_019175578.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Ipomoea nil] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG410YEFW Pfam:hATC Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); "PF14372.5,PF05699.13" Domain of unknown function (DUF4413)|hAT family C-terminal dimerisation region TRINITY_DN25553_c0_g4_i2 2049.001993 1352.521307 2745.482679 2.029899762 1.021408488 1.32E-40 1.08E-38 Up 163.6571 168.9309 164.7167 280.2977 275.6408 258.3421 XP_011099373.1 60S ribosomal protein L26-1 [Sesamum indicum] P51414|RL261_ARATH 60S ribosomal protein L26-1 OS=Arabidopsis thaliana OX=3702 GN=RPL26A PE=2 SV=2 sind:105177817 K02898 "RP-L26e, RPL26" large subunit ribosomal protein L26e ko03010 Ribosome KOG3401 60S ribosomal protein L26 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0198 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (By similarity) Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to cold (GO:0009409);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Biological Process: ribosomal large subunit biogenesis (GO:0042273);|Cellular Component: polysomal ribosome (GO:0042788); "PF16906.4,PF00467.28" "Ribosomal proteins L26 eukaryotic, L24P archaeal|KOW motif" TRINITY_DN25553_c0_g5_i2 21.00230636 41.26959434 0.735018369 0.017810167 -5.811155143 1.28E-11 2.24E-10 Down 3.31487 5.918058 4.666986 0.1890659 1.19E-70 2.77E-45 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25567_c0_g4_i1 9.262452172 1.56044838 16.96445596 10.87152653 3.442482626 0.000424489 0.002441874 Up 8.01E-99 0.7594304 3.07E-77 2.598912 3.014915 1.440813 EYU34668.1 hypothetical protein MIMGU_mgv1a002793mg [Erythranthe guttata] O04235|SSRP1_VICFA FACT complex subunit SSRP1 OS=Vicia faba OX=3906 GN=SSRP1 PE=2 SV=1 sind:105167672 K09272 SSRP1 structure-specific recognition protein 1 -- -- KOG0526 "Nucleosome-binding factor SPN, POB3 subunit" [KLB] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING "Transcription |Replication, recombination and repair |Chromatin structure and dynamics " B COG5165 "Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II" Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Cellular Component: chromosome (GO:0005694);|Biological Process: DNA replication (GO:0006260);|Biological Process: DNA repair (GO:0006281); PF08512.11 Histone chaperone Rttp106-like TRINITY_DN25568_c0_g1_i1 18.7220569 9.461582197 27.98253161 2.95748967 1.564373129 0.009623111 0.036887198 Up 1.055431 1.246905 0.8262515 2.384762 1.961479 2.986344 XP_020551263.1 uncharacterized protein LOC105167549 isoform X1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YCKV "function DUF1296 domain containing protein, expressed" -- -- -- TRINITY_DN25568_c1_g2_i2 25.41064322 35.87873464 14.9425518 0.416473768 -1.263702467 0.013683168 0.049508707 Down 3.835866 3.310746 4.218469 0.9328183 1.189001 1.661256 PIN08558.1 DNA topoisomerase (ATP-hydrolyzing) [Handroanthus impetiginosus] O24308|TOP2_PEA DNA topoisomerase 2 OS=Pisum sativum OX=3888 GN=TOP2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- L COG0188 "DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings (By similarity)" Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA topoisomerase type II (ATP-hydrolyzing) activity (GO:0003918);|Molecular Function: ATP binding (GO:0005524);|Biological Process: DNA topological change (GO:0006265);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN25568_c1_g3_i2 44.39290477 85.02213851 3.763671022 0.044266953 -4.497626112 7.08E-19 2.15E-17 Down 4.587925 5.176064 3.493225 7.86E-26 0.188196 0.2777988 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2556_c0_g1_i1 3.367514436 0 6.735028873 Inf Inf 0.006817931 0.027619989 Up 0 0 1.27E-55 0.9204955 0.8999595 1.50194 ANN11967.1 alpha-tubulin [Puccinia helianthi] P11481|TBA1_VOLCA Tubulin alpha-1/alpha-2 chain OS=Volvox carteri OX=3067 GN=TUBA1 PE=3 SV=1 cic:CICLE_v10011709mg K07374 TUBA tubulin alpha ko04145 Phagosome KOG1376 Alpha tubulin [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5023 protein polymerization Molecular Function: GTPase activity (GO:0003924);|Molecular Function: structural constituent of cytoskeleton (GO:0005200);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based process (GO:0007017); PF03953.16 Tubulin C-terminal domain TRINITY_DN25570_c0_g2_i1 79.84969295 32.01700602 127.6823799 3.98795502 1.995649138 2.04E-11 3.51E-10 Up 1.135715 2.457971 1.315496 5.373511 4.597294 5.766337 XP_011097323.1 F-box protein At3g07870-like [Sesamum indicum] Q9SFC7|FB135_ARATH F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZR4H FBOX Biological Process: positive regulation of cell proliferation (GO:0008284);|Cellular Component: plasmodesma (GO:0009506); "PF00646.32,PF12937.6" F-box domain|F-box-like TRINITY_DN25570_c0_g4_i3 66.05796488 21.64355349 110.4723763 5.104169995 2.351676379 6.47E-09 8.35E-08 Up 1.749763 0.8174492 0.9566306 3.633632 4.707471 6.234777 XP_011097323.1 F-box protein At3g07870-like [Sesamum indicum] Q9SFC7|FB135_ARATH F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YWCP F-box protein Biological Process: positive regulation of cell proliferation (GO:0008284);|Cellular Component: plasmodesma (GO:0009506); "PF00646.32,PF07734.12,PF12937.6,PF08268.11" F-box domain|F-box associated|F-box-like|F-box associated domain TRINITY_DN25570_c0_g5_i4 130.9819741 53.95672791 208.0072203 3.855074768 1.946758841 1.92E-16 4.92E-15 Up 2.101169 3.155713 2.979951 8.770631 8.38659 8.429655 XP_011097335.1 F-box protein At3g07870-like [Sesamum indicum] Q9SFC7|FB135_ARATH F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZR4H FBOX Biological Process: positive regulation of cell proliferation (GO:0008284);|Cellular Component: plasmodesma (GO:0009506); -- -- TRINITY_DN25573_c0_g1_i3 82.02334128 45.58367598 118.4630066 2.598803278 1.37784743 1.52E-06 1.41E-05 Up 1.382355 1.342403 1.196222 2.236728 2.734269 3.217644 XP_011079644.1 poly [ADP-ribose] polymerase 2 isoform X2 [Sesamum indicum] O50017|PARP2_MAIZE Poly [ADP-ribose] polymerase 2 OS=Zea mays OX=4577 GN=PARP2 PE=2 SV=1 sind:105163117 K10798 PARP poly [ADP-ribose] polymerase ko03410 Base excision repair KOG1037 "NAD+ ADP-ribosyltransferase Parp, required for poly-ADP ribosylation of nuclear proteins" [KLO] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING|CELLULAR PROCESSES AND SIGNALING "Transcription |Replication, recombination and repair |Posttranslational modification, protein turnover, chaperones " S ENOG410XP18 Poly (ADP-ribose) polymerase Molecular Function: DNA binding (GO:0003677);|Molecular Function: NAD+ ADP-ribosyltransferase activity (GO:0003950);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Biological Process: double-strand break repair (GO:0006302);|Biological Process: protein poly-ADP-ribosylation (GO:0070212);|Molecular Function: protein ADP-ribosylase activity (GO:1990404); "PF00644.19,PF02877.13,PF02037.26,PF05406.14" "Poly(ADP-ribose) polymerase catalytic domain|Poly(ADP-ribose) polymerase, regulatory domain|SAP domain|WGR domain" TRINITY_DN25577_c1_g1_i1 9.92485627 19.84971254 0 0 #NAME? 6.50E-07 6.41E-06 Down 2.002967 4.479778 5.420236 0 5.72E-33 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25577_c1_g3_i1 25.74492449 14.17688972 37.31295925 2.631956654 1.39613573 0.014502548 0.051970803 Up 0.7992179 0.5274814 1.359083 1.037803 2.152338 2.552135 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25581_c0_g1_i2 100.1961489 145.6088713 54.78342643 0.376236873 -1.410286848 8.03E-08 8.97E-07 Down 7.105796 6.160868 6.708406 1.312587 2.283253 2.513584 EEF40757.1 conserved hypothetical protein [Ricinus communis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF13365.5 Trypsin-like peptidase domain TRINITY_DN25581_c0_g2_i2 7.327409159 13.15877115 1.496047164 0.113692012 -3.136797204 0.046533474 0.133808556 Down 1.240293 3.396946 0.5718231 0 0.2283217 0.2539322 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25585_c0_g1_i1 11.12280258 18.93556518 3.310039975 0.174805449 -2.516177937 0.004701873 0.020117974 Down 2.620917 1.963961 0.8767279 0.3984672 0.2667394 0.1345747 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25585_c0_g6_i1 10.06317296 4.172662377 15.95368354 3.823382316 1.934849468 0.022413683 0.074329654 Up 0.6543776 0.6288741 0.3345264 1.948204 1.438218 1.392999 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25591_c0_g3_i4 267.4141053 395.4789013 139.3493093 0.352355862 -1.504894878 2.87E-19 8.98E-18 Down 34.77549 36.32014 33.8006 11.41021 9.968008 8.468975 PIN20920.1 "putative membrane protein, predicted efflux pump [Handroanthus impetiginosus]" F4J158|DTX24_ARATH Protein DETOXIFICATION 24 OS=Arabidopsis thaliana OX=3702 GN=DTX24 PE=2 SV=1 sind:105155910 K03327 "TC.MATE, SLC47A, norM, mdtK, dinF" "multidrug resistance protein, MATE family" -- -- KOG1347 "Uncharacterized membrane protein, predicted efflux pump" [R] POORLY CHARACTERIZED General function prediction only V COG0534 Mate efflux family protein Biological Process: drug transmembrane transport (GO:0006855);|Molecular Function: drug transmembrane transporter activity (GO:0015238);|Molecular Function: antiporter activity (GO:0015297);|Cellular Component: integral component of membrane (GO:0016021); PF01554.17 MatE TRINITY_DN25597_c0_g2_i1 15.04511704 24.19744123 5.892792846 0.243529586 -2.037831041 0.005516819 0.023048777 Down 3.409018 3.319673 1.517239 0.5200704 0.7777344 0.2689914 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25602_c0_g1_i2 103.5100946 153.8498568 53.17033235 0.345598842 -1.532829711 3.22E-09 4.32E-08 Down 7.125452 5.481787 7.438237 1.9338 1.74106 1.923065 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25608_c0_g1_i1 173.859578 65.31832964 282.4008264 4.323454503 2.112184507 2.35E-24 9.91E-23 Up 2.770437 3.018692 2.609623 8.977336 8.961465 11.29012 XP_020554457.1 LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Sesamum indicum] O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana OX=3702 GN=At5g35370 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF01453.23,PF08276.10" D-mannose binding lectin|PAN-like domain TRINITY_DN25610_c1_g4_i1 241.4869225 159.8356447 323.1382004 2.021690475 1.015562135 2.71E-09 3.68E-08 Up 9.772739 6.771345 8.808922 13.65669 14.04227 13.74471 EEF34040.1 "eukaryotic translation initiation factor 4e, putative [Ricinus communis]" Q03389|IF4E2_WHEAT Eukaryotic translation initiation factor isoform 4E-2 OS=Triticum aestivum OX=4565 PE=1 SV=1 rcu:8265745 K03259 EIF4E translation initiation factor 4E ko03013 RNA transport KOG1670 "Translation initiation factor 4F, cap-binding subunit (eIF-4E) and related cap-binding proteins" [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG5053 eukaryotic translation initiation factor Molecular Function: translation initiation factor activity (GO:0003743);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: regulation of translation (GO:0006417);|Biological Process: response to virus (GO:0009615);|Biological Process: negative regulation of defense response to virus (GO:0050687); -- -- TRINITY_DN25615_c0_g1_i3 101.8073574 13.72578017 189.8889346 13.83447295 3.790195778 6.38E-36 4.41E-34 Up 0.6997536 1.267039 0.5213544 10.64828 7.892224 8.9617 AIS39008.1 terpene synthase 7 [Salvia miltiorrhiza] J7LQ09|TPS7_PHYDL Trans-alpha-bergamotene synthase OS=Phyla dulcis OX=542674 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate catabolic process (GO:0045339);|Biological Process: (-)-exo-alpha-bergamotene biosynthetic process (GO:1901940); PF03936.15 "Terpene synthase family, metal binding domain" TRINITY_DN25619_c0_g1_i1 35.15540381 63.62534229 6.685465335 0.105075511 -3.250501626 8.95E-11 1.43E-09 Down 4.242941 5.746756 5.452975 0.6660976 0.2504743 0.3475476 PIN20615.1 hypothetical protein CDL12_06694 [Handroanthus impetiginosus] O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana OX=3702 GN=At2g39510 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41118HE auxin-induced protein Cellular Component: plasma membrane (GO:0005886);|Molecular Function: L-glutamine transmembrane transporter activity (GO:0015186);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: seed development (GO:0048316);|Biological Process: L-glutamate import across plasma membrane (GO:0098712); PF00892.19 EamA-like transporter family TRINITY_DN25628_c1_g1_i1 163.8513259 244.2357764 83.4668754 0.341747129 -1.548998877 1.46E-13 3.03E-12 Down 9.892643 11.81819 10.17963 2.181947 3.082291 3.54226 PIN19395.1 hypothetical protein CDL12_07925 [Handroanthus impetiginosus] Q9LSD5|TCP20_ARATH Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: proximal promoter sequence-specific DNA binding (GO:0000987);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: anatomical structure morphogenesis (GO:0009653);|Molecular Function: sequence-specific DNA binding (GO:0043565); -- -- TRINITY_DN25628_c1_g2_i1 14.67391887 26.3557434 2.992094329 0.113527222 -3.138889823 5.27E-05 0.000371468 Down 3.176948 3.05091 3.790145 0 0.457738 0.4667599 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25638_c0_g2_i1 68.44027912 107.0742046 29.80635368 0.278371003 -1.844919158 3.50E-06 3.07E-05 Down 14.79625 23.97569 16.52373 2.204017 5.146341 5.264485 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2563_c0_g1_i1 5.404593079 1.275402478 9.533783681 7.475117735 2.902096302 0.019513206 0.066439005 Up 0.3905411 0.3812143 0 1.824423 1.553244 0.3557009 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25640_c0_g1_i1 6.740649966 13.48129993 0 0 #NAME? 9.22E-05 0.000615687 Down 1.705521 1.550928 0.9287312 7.06E-41 0 0 PIM99122.1 hypothetical protein CDL12_28387 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111G6N expressed protein -- -- -- TRINITY_DN25644_c0_g1_i2 54.96121699 81.19312881 28.72930518 0.353839119 -1.498834539 2.30E-05 0.000174169 Down 8.981486 9.344628 11.49454 3.441947 3.490171 1.533307 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25644_c1_g1_i5 137.9870522 238.4370527 37.53705177 0.157429608 -2.667221198 1.06E-27 5.33E-26 Down 9.869403 10.72099 9.530829 1.218815 1.294817 1.332898 PWA78505.1 OSBP(oxysterol binding protein)-related protein 1D [Artemisia annua] Q8L751|ORP1C_ARATH Oxysterol-binding protein-related protein 1C OS=Arabidopsis thaliana OX=3702 GN=ORP1C PE=2 SV=1 -- -- -- -- -- -- KOG1737 Oxysterol-binding protein [I] METABOLISM Lipid transport and metabolism -- -- -- Cellular Component: cytosol (GO:0005829);|Molecular Function: lipid binding (GO:0008289);|Molecular Function: sterol transporter activity (GO:0015248);|Cellular Component: membrane (GO:0016020);|Molecular Function: sterol binding (GO:0032934);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231); -- -- TRINITY_DN25644_c1_g2_i1 6.915653162 12.38236538 1.448940942 0.117016491 -3.095216239 0.00752006 0.029991046 Down 1.443583 1.367165 3.401664 1.58E-81 0.6624326 5.09E-79 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25646_c0_g3_i1 36.36368836 68.19986027 4.527516451 0.066386008 -3.912976995 1.48E-08 1.82E-07 Down 11.25456 6.011579 6.775021 0.3449993 0.2284701 0.8207705 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25666_c0_g2_i3 60.96219109 81.787865 40.13651718 0.49073927 -1.026971371 0.022064852 0.073355049 Down 5.572332 7.334105 10.39683 1.705908 2.766053 4.927016 PIN15772.1 "Mannan endo-1,4-beta-mannosidase [Handroanthus impetiginosus]" Q9FJZ3|MAN7_ARATH "Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis thaliana OX=3702 GN=MAN7 PE=2 SV=1" sind:105165771 K19355 MAN "mannan endo-1,4-beta-mannosidase" ko00051 Fructose and mannose metabolism -- -- -- -- -- G COG3934 "Mannan endo-1,4-beta-mannosidase" "Cellular Component: extracellular region (GO:0005576);|Biological Process: plant-type cell wall loosening (GO:0009828);|Biological Process: seed germination (GO:0009845);|Biological Process: fruit dehiscence (GO:0010047);|Molecular Function: mannan endo-1,4-beta-mannosidase activity (GO:0016985);|Biological Process: mannan catabolic process (GO:0046355);|Cellular Component: cell periphery (GO:0071944);|Biological Process: fruit valve development (GO:1990059);" -- -- TRINITY_DN25667_c0_g1_i1 182.6734135 111.5771549 253.7696721 2.274387372 1.185477994 7.39E-10 1.06E-08 Up 5.172268 6.208257 4.942312 10.06137 11.2355 8.664028 AKN09644.1 basic helix-loop-helix transcription factor [Salvia miltiorrhiza] Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana OX=3702 GN=BHLH74 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YGAM Transcription factor "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: response to blue light (GO:0009637);|Biological Process: regulation of growth (GO:0040008);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: protein dimerization activity (GO:0046983);" PF00010.25 Helix-loop-helix DNA-binding domain TRINITY_DN25670_c0_g4_i1 98.68932144 188.1909133 9.187729609 0.048821324 -4.35634476 1.28E-38 9.78E-37 Down 6.1255 6.110086 6.607252 0.7369493 6.30E-09 9.55E-10 PIN22524.1 hypothetical protein CDL12_04759 [Handroanthus impetiginosus] Q9SQ57|PXG_SESIN Peroxygenase OS=Sesamum indicum OX=4182 GN=SOP1 PE=1 SV=1 sind:105174042 K13422 MYC2 transcription factor MYC2 ko04075 Plant hormone signal transduction -- -- -- -- -- K ENOG410Y9TK nucleic acid binding transcription factor activity Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: lipid droplet (GO:0005811);|Cellular Component: organelle membrane (GO:0031090);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: plant seed peroxidase activity (GO:1990137); -- -- TRINITY_DN25676_c0_g2_i1 25.98513289 39.17229832 12.79796745 0.326709639 -1.613919075 0.001798588 0.008765656 Down 3.950471 4.038481 3.944372 0.9953064 0.4378719 1.761102 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25677_c1_g1_i11 158.8243413 312.1230396 5.525642979 0.017703413 -5.819828695 3.62E-52 4.15E-50 Down 5.777522 7.654606 5.895784 0.2354654 0.02387436 0.02610573 XP_023760264.1 uncharacterized protein LOC111908693 [Lactuca sativa] Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBST Mariner sub-class "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: regulation of flower development (GO:0009909);|Biological Process: floral meristem determinacy (GO:0010582);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: metal ion binding (GO:0046872);" -- -- TRINITY_DN25677_c1_g4_i1 17.68259022 4.166461984 31.19871846 7.488060272 2.904592047 2.52E-05 0.000189146 Up 0.1235295 0.5985021 0.5749722 3.352368 1.803515 2.273477 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25677_c1_g5_i1 36.69294798 58.35686297 15.02903298 0.257536684 -1.957150148 1.02E-05 8.22E-05 Down 3.217809 3.120002 4.96574 0.7124548 0.3786887 1.209929 PIN01709.1 hypothetical protein CDL12_25785 [Handroanthus impetiginosus] Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111C1B NA "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: regulation of flower development (GO:0009909);|Biological Process: floral meristem determinacy (GO:0010582);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: metal ion binding (GO:0046872);" -- -- TRINITY_DN25692_c0_g6_i1 44.88337714 24.17619497 65.59055932 2.713022434 1.439900977 0.009529832 0.036615663 Up 4.515051 1.871032 2.631993 8.46636 7.670376 3.590988 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25693_c0_g1_i1 7.059297467 0 14.11859493 Inf Inf 1.79E-05 0.000138766 Up 0 0 0 1.047061 1.816135 1.6463 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25693_c0_g2_i1 338.4286685 195.1798962 481.6774407 2.467864006 1.303262896 7.41E-19 2.25E-17 Up 18.20247 14.02511 14.59898 30.82215 30.51088 31.94785 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25706_c0_g1_i4 647.923369 312.1956756 983.6510624 3.150751721 1.655696075 3.77E-47 3.77E-45 Up 13.42503 12.63519 13.61528 35.22574 31.23473 34.48107 XP_002267117.4 PREDICTED: ABC transporter G family member 11 [Vitis vinifera] Q8RXN0|AB11G_ARATH ABC transporter G family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCG11 PE=1 SV=1 -- -- -- -- -- -- KOG0061 "Transporter, ABC superfamily (Breast cancer resistance protein)" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1131 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Cellular Component: external side of plasma membrane (GO:0009897);|Biological Process: stem vascular tissue pattern formation (GO:0010222);|Biological Process: cotyledon vascular tissue pattern formation (GO:0010588);|Molecular Function: fatty acid transmembrane transporter activity (GO:0015245);|Biological Process: fatty acid transport (GO:0015908);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Molecular Function: protein homodimerization activity (GO:0042803);|Biological Process: transmembrane transport (GO:0055085);|Biological Process: cutin transport (GO:0080051);" "PF01061.23,PF00005.26" ABC-2 type transporter|ABC transporter TRINITY_DN25709_c1_g1_i9 196.6104097 264.9901074 128.230712 0.483907544 -1.047196665 2.53E-08 3.04E-07 Down 7.158932 7.750452 7.700994 2.497513 3.194267 3.125916 XP_022848662.1 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Olea europaea var. sylvestris] O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00954.19,PF08276.10" S-locus glycoprotein domain|PAN-like domain TRINITY_DN25716_c2_g1_i1 19.04035424 26.49248625 11.58822223 0.437415429 -1.192923986 0.047881305 0.136868772 Down 3.422844 4.26235 3.563011 1.270166 0.9930533 1.741154 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25716_c3_g1_i10 101.0216725 201.3188745 0.724470471 0.003598622 -8.118339834 3.44E-59 4.74E-57 Down 4.447453 3.977045 4.043551 0 0.04290238 3.96E-85 XP_016648173.1 PREDICTED: uncharacterized protein LOC103325252 [Prunus mume] Q9SUC3|MS5_ARATH Protein POLLENLESS 3 OS=Arabidopsis thaliana OX=3702 GN=MS5 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4110VSD male sterility MS5 Cellular Component: nucleus (GO:0005634);|Biological Process: male meiotic nuclear division (GO:0007140);|Biological Process: microsporogenesis (GO:0009556);|Biological Process: cell division (GO:0051301);|Biological Process: meiotic cell cycle (GO:0051321); -- -- TRINITY_DN25716_c3_g2_i1 15.72169686 31.44339373 0 0 #NAME? 1.59E-10 2.48E-09 Down 2.008526 3.703824 3.443088 0 0 0 XP_011096694.1 uncharacterized protein LOC105175800 [Sesamum indicum] Q9SUC3|MS5_ARATH Protein POLLENLESS 3 OS=Arabidopsis thaliana OX=3702 GN=MS5 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4110VSD male sterility MS5 Cellular Component: nucleus (GO:0005634);|Biological Process: male meiotic nuclear division (GO:0007140);|Biological Process: microsporogenesis (GO:0009556);|Biological Process: cell division (GO:0051301);|Biological Process: meiotic cell cycle (GO:0051321); -- -- TRINITY_DN25721_c0_g1_i1 214.2155109 324.2701204 104.1609014 0.321216464 -1.638382256 8.66E-19 2.62E-17 Down 6.47986 7.399409 7.346663 1.384317 2.053688 2.069083 XP_011089488.1 telomere repeat-binding protein 2 [Sesamum indicum] Q6R0E3|TRP5_ARATH Telomere repeat-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=TRP5 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- K ENOG4111PQU Telomere repeat-binding protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634); -- -- TRINITY_DN25732_c0_g2_i1 12.58969091 21.48637014 3.693011689 0.171876946 -2.540552043 0.007856924 0.031142975 Down 5.300162 4.187228 1.507189 0 1.026429 0.5250402 XP_011075190.1 uncharacterized protein LOC105159716 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XXIE Nucleolar protein -- -- -- TRINITY_DN25734_c1_g2_i1 11.95915683 1.801845837 22.11646782 12.27433967 3.617573508 0.03365585 0.103568572 Up 0.113027 3.84E-12 0.8911668 5.754028 0.1434382 4.431389 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25735_c0_g2_i2 119.7471124 170.9066139 68.58761099 0.401316306 -1.317188318 3.93E-08 4.59E-07 Down 5.709205 6.758557 6.239792 1.901807 1.79222 2.373103 XP_011094942.1 phosphatidylinositol:ceramide inositolphosphotransferase 1 [Sesamum indicum] Q9M325|IPCS1_ARATH Phosphatidylinositol:ceramide inositolphosphotransferase 1 OS=Arabidopsis thaliana OX=3702 GN=IPCS1 PE=2 SV=1 -- -- -- -- -- -- KOG3058 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG410XNSC sphingomyelin synthase Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: integral component of plasma membrane (GO:0005887);|Biological Process: sphingolipid biosynthetic process (GO:0030148);|Cellular Component: integral component of Golgi membrane (GO:0030173);|Cellular Component: integral component of endoplasmic reticulum membrane (GO:0030176);|Molecular Function: sphingomyelin synthase activity (GO:0033188);|Molecular Function: inositol phosphoceramide synthase activity (GO:0045140);|Biological Process: ceramide biosynthetic process (GO:0046513);|Molecular Function: ceramide cholinephosphotransferase activity (GO:0047493); PF14360.5 PAP2 superfamily C-terminal TRINITY_DN25743_c0_g2_i4 132.6265391 194.4189392 70.83413905 0.364337648 -1.456652014 3.04E-10 4.58E-09 Down 7.453076 6.611397 6.382524 1.696083 1.89435 2.419774 XP_011094669.1 origin of replication complex subunit 3 [Sesamum indicum] Q6E7H0|ORC3_ARATH Origin of replication complex subunit 3 OS=Arabidopsis thaliana OX=3702 GN=ORC3 PE=1 SV=1 -- -- -- -- -- -- KOG2538 "Origin recognition complex, subunit 3" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " -- -- -- Cellular Component: origin recognition complex (GO:0000808);|Molecular Function: DNA replication origin binding (GO:0003688);|Cellular Component: nuclear pre-replicative complex (GO:0005656);|Cellular Component: nuclear origin of replication recognition complex (GO:0005664);|Biological Process: DNA replication (GO:0006260);|Biological Process: pre-replicative complex assembly involved in nuclear cell cycle DNA replication (GO:0006267);|Biological Process: DNA replication initiation (GO:0006270);|Biological Process: response to sucrose (GO:0009744);|Cellular Component: DNA replication preinitiation complex (GO:0031261);|Biological Process: lateral root development (GO:0048527); -- -- TRINITY_DN25751_c0_g1_i2 95.72715874 158.7676424 32.68667504 0.205877435 -2.280142379 9.42E-16 2.29E-14 Down 3.419178 3.327247 3.14271 0.6127616 0.4992509 0.5229631 XP_011078149.1 kinesin-like protein NACK2 [Sesamum indicum] Q8S949|KN7B_TOBAC Kinesin-like protein NACK2 OS=Nicotiana tabacum OX=4097 GN=NACK2 PE=1 SV=1 sind:105161961 K11498 CENPE centromeric protein E -- -- KOG0242 Kinesin-like protein [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5059 Kinesin family member Biological Process: cell plate assembly (GO:0000919);|Molecular Function: microtubule motor activity (GO:0003777);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based movement (GO:0007018);|Molecular Function: microtubule binding (GO:0008017);|Cellular Component: phragmoplast (GO:0009524); "PF00225.22,PF11995.7,PF16796.4" Kinesin motor domain|Domain of unknown function (DUF3490)|Microtubule binding TRINITY_DN25758_c0_g1_i1 56.2222576 79.4512904 32.9932248 0.415263549 -1.267900855 0.001714529 0.008411069 Down 13.8164 11.62303 9.48477 5.36746 0.9825641 5.201023 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25759_c2_g2_i1 45.49173173 70.51035405 20.47310941 0.290356072 -1.784104892 9.07E-06 7.39E-05 Down 7.381941 7.982955 5.217995 1.294669 1.681736 1.811425 EXB60137.1 NAD kinase 2 [Morus notabilis] Q9C5W3|NADK2_ARATH "NAD kinase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NADK2 PE=1 SV=1" nnu:104606668 K00858 "ppnK, NADK" NAD+ kinase ko00760 Nicotinate and nicotinamide metabolism KOG2178 Predicted sugar kinase [G] METABOLISM Carbohydrate transport and metabolism G COG0061 Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus (By similarity) Molecular Function: NAD+ kinase activity (GO:0003951);|Molecular Function: calmodulin binding (GO:0005516);|Molecular Function: ATP binding (GO:0005524);|Biological Process: NADP biosynthetic process (GO:0006741);|Cellular Component: chloroplast (GO:0009507);|Biological Process: NAD metabolic process (GO:0019674); -- -- TRINITY_DN25774_c1_g4_i1 32.40528464 18.71149062 46.09907866 2.463677513 1.300813425 0.004080005 0.017803395 Up 0.9377566 1.050178 0.8830466 1.864748 1.913582 1.994276 OTG38433.1 hypothetical protein HannXRQ_Chr01g0029671 [Helianthus annuus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YH2P NA -- -- -- TRINITY_DN25776_c2_g1_i1 298.2221675 145.7111265 450.7332084 3.093334183 1.629162701 2.52E-24 1.06E-22 Up 14.99853 12.50236 17.77754 38.81534 37.70168 36.46536 XP_019182511.1 PREDICTED: ABC transporter G family member 11-like [Ipomoea nil] Q8RXN0|AB11G_ARATH ABC transporter G family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCG11 PE=1 SV=1 -- -- -- -- -- -- KOG0061 "Transporter, ABC superfamily (Breast cancer resistance protein)" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1131 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Cellular Component: external side of plasma membrane (GO:0009897);|Biological Process: stem vascular tissue pattern formation (GO:0010222);|Biological Process: cotyledon vascular tissue pattern formation (GO:0010588);|Molecular Function: fatty acid transmembrane transporter activity (GO:0015245);|Biological Process: fatty acid transport (GO:0015908);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Molecular Function: protein homodimerization activity (GO:0042803);|Biological Process: transmembrane transport (GO:0055085);|Biological Process: cutin transport (GO:0080051);" "PF00005.26,PF13304.5,PF03193.15" "ABC transporter|AAA domain, putative AbiEii toxin, Type IV TA system|RsgA GTPase" TRINITY_DN25786_c0_g1_i5 821.9496513 1131.538855 512.360448 0.452799695 -1.143055109 3.57E-28 1.84E-26 Down 36.13796 34.3372 32.95734 12.69924 12.85815 12.23826 PIN02149.1 Cytochrome P450 CYP4/CYP19/CYP26 subfamily [Handroanthus impetiginosus] H2DH21|C7A29_PANGI Cytochrome P450 CYP72A219 OS=Panax ginseng OX=4054 PE=2 SV=1 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN2578_c0_g1_i1 15.82857731 30.16110746 1.496047164 0.049601864 -4.333461839 3.04E-07 3.15E-06 Down 2.739388 2.438556 2.192856 0 0.1192306 0.1206225 ASR75372.1 retrotransposon protein [Oryza sativa f. spontanea] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN25791_c1_g1_i1 14.36260503 22.62571316 6.099496898 0.269582526 -1.891201111 0.007227823 0.029011633 Down 3.13301 5.494893 4.966321 0.7102102 0 2.232335 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25795_c0_g1_i2 119.3689476 179.3011389 59.43675631 0.331491237 -1.592957362 1.18E-10 1.87E-09 Down 11.09931 9.515935 9.077117 2.510122 3.575596 1.902448 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25799_c0_g2_i1 177.420009 242.6975541 112.1424638 0.462066724 -1.113826898 6.63E-05 0.000456991 Down 16.81383 11.68955 13.46038 5.548878 3.416642 6.723734 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25811_c0_g1_i1 148.426618 3.015839273 293.8373968 97.43138484 6.606314667 1.44E-20 4.89E-19 Up 0.3603614 1.036905 0.274711 31.45721 37.25495 57.31572 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25815_c0_g4_i1 5.230409535 10.46081907 0 0 #NAME? 0.00073303 0.003964227 Down 2.066232 0.6101523 1.432242 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25817_c1_g2_i1 9.548922828 15.44384961 3.653996048 0.236598785 -2.079485432 0.025960573 0.083754677 Down 3.422839 1.384744 1.746458 0.7764178 0.5082674 0 PIN22924.1 Serine/threonine protein kinase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- -- -- TRINITY_DN25819_c0_g2_i14 155.7481556 223.8350109 87.66130028 0.391633552 -1.352423728 4.13E-10 6.15E-09 Down 7.758776 7.370937 6.106514 2.219088 2.699726 1.762794 PIN23274.1 hypothetical protein CDL12_04040 [Handroanthus impetiginosus] O80813|YC20L_ARATH Ycf20-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g65420 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKWV Protein of unknown function (DUF565) Cellular Component: chloroplast (GO:0009507);|Biological Process: nonphotochemical quenching (GO:0010196);|Cellular Component: integral component of membrane (GO:0016021); PF04483.11 Protein of unknown function (DUF565) TRINITY_DN25828_c0_g1_i2 90.27570605 139.1260832 41.42532891 0.297753864 -1.747807862 7.58E-10 1.09E-08 Down 11.69201 10.54796 10.25338 3.175622 2.704762 1.902766 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25828_c0_g2_i1 31.64081673 55.42579787 7.855835588 0.141736085 -2.818720992 3.31E-06 2.92E-05 Down 11.51392 10.34047 5.339606 1.008866 0.667406 1.35526 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25828_c2_g1_i1 9.169139065 15.39820465 2.940073475 0.190936122 -2.388838036 0.010734722 0.040334512 Down 1.520707 2.048277 3.049969 0.9809946 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25830_c0_g2_i1 7.214766021 14.42953204 0 0 #NAME? 4.74E-05 0.000337567 Down 0.9097882 1.682702 0.5823326 2.46E-27 6.17E-27 0.000165139 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25844_c0_g1_i2 194.2648493 76.9688131 311.5608854 4.047884758 2.017168218 8.92E-25 3.83E-23 Up 2.697584 1.656883 2.384275 7.541998 7.29051 7.172873 PIN23301.1 Ca2+ sensor (EF-Hand superfamily) [Handroanthus impetiginosus] Q8L636|NCL_ARATH Sodium/calcium exchanger NCL OS=Arabidopsis thaliana OX=3702 GN=NCL PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111577 Sodium/calcium exchanger protein Cellular Component: plant-type vacuole (GO:0000325);|Molecular Function: calcium:sodium antiporter activity (GO:0005432);|Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: cellular calcium ion homeostasis (GO:0006874);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: calcium:proton antiporter activity (GO:0015369);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: calcium ion homeostasis (GO:0055074);|Biological Process: calcium ion transmembrane transport (GO:0070588);|Biological Process: cellular response to salt stress (GO:0071472); "PF13405.5,PF13499.5,PF00036.31" EF-hand domain|EF-hand domain pair|EF hand TRINITY_DN25860_c0_g1_i2 331.7060782 206.7487062 456.6634503 2.208785045 1.143253025 9.58E-15 2.18E-13 Up 5.341351 6.653463 5.33565 10.16134 10.27649 10.46772 XP_011094471.1 uncharacterized protein LOC105174163 [Sesamum indicum] Q9LTA6|WAV3_ARATH E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana OX=3702 GN=WAV3 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG2304 "von Willebrand factor, type A" Cellular Component: plasma membrane (GO:0005886);|Biological Process: gravitropism (GO:0009630);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: root development (GO:0048364);|Molecular Function: ubiquitin protein ligase activity (GO:0061630); "PF14624.5,PF00092.27,PF13519.5,PF13768.5" VWA / Hh protein intein-like|von Willebrand factor type A domain|von Willebrand factor type A domain|von Willebrand factor type A domain TRINITY_DN25862_c0_g1_i2 18.45076167 34.72811193 2.173411413 0.062583633 -3.998070779 1.23E-07 1.34E-06 Down 4.699801 3.916693 4.559457 1.05E-64 0.6292468 0 EYU41956.1 hypothetical protein MIMGU_mgv1a006180mg [Erythranthe guttata] Q8RXQ1|TBL35_ARATH Protein trichome birefringence-like 35 OS=Arabidopsis thaliana OX=3702 GN=TBL35 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YG4N Pfam:DUF231 Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: O-acetyltransferase activity (GO:0016413);|Biological Process: xylan biosynthetic process (GO:0045492);|Molecular Function: xylan O-acetyltransferase activity (GO:1990538); -- -- TRINITY_DN25871_c0_g4_i1 18.34022269 10.46234305 26.21810234 2.505949404 1.325357287 0.044186341 0.128397048 Up 0.8014457 3.534996 1.026479 2.503328 3.124849 5.500818 XP_011073066.1 putative late blight resistance protein homolog R1A-10 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- PF00931.21 NB-ARC domain TRINITY_DN25876_c1_g1_i10 357.4810415 662.7148347 52.24724841 0.078838206 -3.664961249 2.92E-101 7.50E-99 Down 21.09337 19.80055 19.66932 1.539489 1.244374 1.073044 XP_011091028.1 WD repeat-containing protein 43 [Sesamum indicum] -- -- sind:105171565 K14546 "UTP5, WDR43" U3 small nucleolar RNA-associated protein 5 ko03008 Ribosome biogenesis in eukaryotes KOG4547 WD40 repeat-containing protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410XRY4 WD repeat domain 43 -- -- -- TRINITY_DN25880_c0_g2_i1 15.78116825 24.13939549 7.422941019 0.307503186 -1.701326737 0.03095215 0.096665089 Down 1.484889 5.759851 4.538822 0.9725047 0.9849813 0.9891401 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25881_c0_g1_i7 191.3278796 260.2480715 122.4076878 0.470350028 -1.088193303 9.92E-09 1.25E-07 Down 7.140504 7.142649 8.198849 2.82641 3.072073 2.647612 PIN14315.1 hypothetical protein CDL12_13053 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZJBT NA -- -- -- TRINITY_DN2588_c0_g1_i1 7.31089476 0 14.62178952 Inf Inf 0.003907298 0.017126686 Up 0 0 0 0 2.831046 3.474774 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25892_c0_g1_i1 13.97518187 21.22060881 6.729754924 0.317132981 -1.656840174 0.026556631 0.085350123 Down 3.627194 3.624404 1.555679 0.490501 0.7463802 1.000078 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25892_c4_g1_i1 75.51774522 116.0811915 34.9542989 0.301119401 -1.73159243 1.98E-08 2.40E-07 Down 4.804243 6.323417 4.911941 1.353643 1.214922 1.334294 XP_012833553.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Erythranthe guttata] Q2R2D5|XA21_ORYSJ Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: cortical endoplasmic reticulum (GO:0032541);|Cellular Component: perinuclear endoplasmic reticulum membrane (GO:1990578); "PF13855.5,PF12799.6,PF00069.24,PF07714.16,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Protein kinase domain|Protein tyrosine kinase|Leucine Rich Repeat TRINITY_DN25892_c6_g1_i1 7.06105939 14.12211878 0 0 #NAME? 0.004245846 0.018436167 Down 4.225158 0.6693442 1.612477 0 0 2.90E-55 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25896_c0_g1_i2 73.84872598 114.7455708 32.9518812 0.287173448 -1.800005731 7.94E-09 1.01E-07 Down 10.56335 8.100278 10.11819 2.035862 2.666207 1.870273 KZV24386.1 pentatricopeptide repeat-containing protein [Dorcoceras hygrometricum] Q8LG95|PP332_ARATH Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX=3702 GN=EMB1417 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111QZ6 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN25901_c0_g1_i2 167.974978 252.3869423 83.56301378 0.331090876 -1.594700841 2.33E-14 5.07E-13 Down 7.638761 7.153231 6.583871 1.944645 1.881789 1.879612 PIN26589.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9CAU7|NEK2_ARATH Serine/threonine-protein kinase Nek2 OS=Arabidopsis thaliana OX=3702 GN=NEK2 PE=2 SV=1 sind:105172220 K08857 NEK NIMA (never in mitosis gene a)-related kinase 1/4/5 -- -- KOG0589 Serine/threonine protein kinase [R] POORLY CHARACTERIZED General function prediction only T ENOG410Y7JF NIMA-related kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524); "PF00069.24,PF07714.16,PF14531.5" Protein kinase domain|Protein tyrosine kinase|Kinase-like TRINITY_DN25911_c0_g1_i7 134.5259094 186.9767617 82.0750572 0.438958598 -1.187843221 5.12E-07 5.13E-06 Down 8.511033 8.476485 5.999 3.030837 2.482614 2.601281 XP_011101597.1 uncharacterized protein LOC105179656 isoform X2 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG3136 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG4110XXW chromosome 12 open reading frame 49 -- PF10218.8 Uncharacterized conserved protein (DUF2054) TRINITY_DN25912_c0_g6_i2 12.81230844 23.76633447 1.8582824 0.078189693 -3.676877743 3.41E-05 0.000249898 Down 1.855864 3.001697 1.884857 0 0.2665276 0.1459475 PIN16724.1 hypothetical protein CDL12_10638 [Handroanthus impetiginosus] Q8L9Y2|ELP6_ARATH Elongator complex protein 6 OS=Arabidopsis thaliana OX=3702 GN=ELP6 PE=1 SV=1 -- -- -- -- -- -- KOG4723 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown K ENOG4111K40 positive regulation of cell migration "Biological Process: tRNA wobble uridine modification (GO:0002098);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: response to oxidative stress (GO:0006979);|Biological Process: positive regulation of cell proliferation (GO:0008284);|Molecular Function: transferase activity, transferring acyl groups (GO:0016746);|Biological Process: negative regulation of anthocyanin metabolic process (GO:0031538);|Cellular Component: Elongator holoenzyme complex (GO:0033588);|Biological Process: regulation of leaf development (GO:2000024);" -- -- TRINITY_DN25914_c1_g1_i1 25.6374203 34.59177196 16.68306864 0.482284303 -1.052044239 0.044825484 0.129842587 Down 6.357749 7.345702 5.526127 1.707062 3.363465 2.416983 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25916_c0_g2_i1 15.64575846 26.32337465 4.968142285 0.188735007 -2.405566057 0.016515784 0.057780424 Down 3.939351 1.223059 2.07411 3.38E-101 0.1914273 0.9748152 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2591_c0_g1_i2 5.254353112 10.50870622 0 0 #NAME? 0.001834033 0.008917336 Down 3.246804 0.4519041 2.905268 0 0 0 CDP11116.1 unnamed protein product [Coffea canephora] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN25926_c0_g2_i2 46.70712718 71.48902806 21.9252263 0.306693585 -1.705130104 1.10E-05 8.83E-05 Down 5.680402 5.693695 6.259098 2.077431 0.936279 1.294103 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25937_c0_g1_i3 120.9513214 166.6807393 75.22190345 0.451293315 -1.147862686 1.77E-06 1.63E-05 Down 12.09757 12.14038 11.18247 4.357212 4.741477 3.776043 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25938_c0_g1_i2 82.29564351 44.33064086 120.2606462 2.712810909 1.439788491 4.79E-07 4.82E-06 Up 1.000216 1.802839 1.196981 3.08106 2.902053 2.772756 XP_020547449.1 cysteine-rich receptor-like protein kinase 2 [Sesamum indicum] Q9CAL3|CRK2_ARATH Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24,PF01657.16" Protein tyrosine kinase|Protein kinase domain|Salt stress response/antifungal TRINITY_DN25938_c0_g2_i1 9.983086512 0.738117137 19.22805589 26.05014154 4.703219306 0.003106733 0.014081272 Up 0 0 0.364888 1.388996 1.838863 4.831453 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25939_c0_g1_i2 89.38423765 133.4933535 45.2751218 0.339156375 -1.559977486 3.16E-08 3.75E-07 Down 4.670024 5.338746 4.540502 1.278187 1.434281 1.274111 XP_011071032.1 aldehyde oxidase GLOX-like [Sesamum indicum] Q3HRQ2|GLOX_VITPS Aldehyde oxidase GLOX OS=Vitis pseudoreticulata OX=231512 GN=GLOX PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZZ1H glyoxal oxidase-related Molecular Function: aldehyde oxidase activity (GO:0004031);|Cellular Component: extracellular space (GO:0005615);|Cellular Component: cell wall (GO:0005618);|Biological Process: defense response to fungus (GO:0050832);|Molecular Function: geranial:oxygen oxidoreductase activity (GO:0102797);|Molecular Function: heptaldehyde:oxygen oxidoreductase activity (GO:0102798); "PF07250.10,PF09118.10" Glyoxal oxidase N-terminus|Domain of unknown function (DUF1929) TRINITY_DN25943_c0_g1_i1 16.91830623 33.83661245 0 0 #NAME? 2.88E-11 4.88E-10 Down 2.237198 3.058281 3.105024 0 0 7.00E-64 XP_011091835.1 phosphatidylinositol 4-phosphate 5-kinase 6 isoform X1 [Sesamum indicum] Q9SFB8|PI5K6_ARATH Phosphatidylinositol 4-phosphate 5-kinase 6 OS=Arabidopsis thaliana OX=3702 GN=PIP5K6 PE=2 SV=1 sind:105172174 K00889 PIP5K 1-phosphatidylinositol-4-phosphate 5-kinase ko00562|ko04144|ko04070 Inositol phosphate metabolism|Endocytosis|Phosphatidylinositol signaling system KOG0229 Phosphatidylinositol-4-phosphate 5-kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG5253 phosphatidylinositol-4-phosphate 5-kinase Molecular Function: ATP binding (GO:0005524);|Molecular Function: 1-phosphatidylinositol-4-phosphate 5-kinase activity (GO:0016308);|Cellular Component: apical plasma membrane (GO:0016324);|Biological Process: clathrin-dependent endocytosis (GO:0072583);|Cellular Component: pollen tube (GO:0090406); -- -- TRINITY_DN25943_c0_g4_i1 8.736006105 17.47201221 0 0 #NAME? 4.22E-06 3.64E-05 Down 3.801476 2.080878 3.8298 0 0 3.70E-76 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25943_c0_g5_i2 20.2696182 40.5392364 0 0 #NAME? 2.72E-13 5.51E-12 Down 3.511271 4.182418 3.403192 0 7.51E-52 6.14E-58 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25946_c0_g3_i2 75.24378143 110.6568768 39.83068605 0.35994768 -1.474140876 0.000659222 0.003607046 Down 12.70104 6.938277 8.206412 2.15756 2.878179 3.112576 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25946_c1_g1_i1 12.41926242 3.960988599 20.87753624 5.270789278 2.398019015 0.002758771 0.012722636 Up 0.6522804 0.4771998 0.7569457 3.060738 1.655885 2.902267 PIN18174.1 hypothetical protein CDL12_09159 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZQDJ Domain of unknown function (DUF2828) -- PF11443.7 Domain of unknown function (DUF2828) TRINITY_DN2594_c0_g1_i1 60.04911468 120.0982294 0 0 #NAME? 9.28E-38 6.86E-36 Down 6.912601 8.915268 6.183013 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2595_c0_g1_i1 27.38086813 54.76173626 0 0 #NAME? 1.16E-17 3.26E-16 Down 4.621251 6.842146 4.179942 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25969_c0_g1_i5 157.2440271 92.08277761 222.4052766 2.415275499 1.27218776 8.77E-10 1.25E-08 Up 4.223172 4.220885 3.494879 7.260834 7.691073 8.332881 XP_011102236.1 ACT domain-containing protein ACR4 isoform X1 [Sesamum indicum] Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana OX=3702 GN=ACR4 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y95G ACT domain Cellular Component: plasmodesma (GO:0009506); "PF01842.24,PF13291.5,PF13740.5" ACT domain|ACT domain|ACT domain TRINITY_DN25970_c4_g1_i1 7.658536666 15.31707333 0 0 #NAME? 8.03E-05 0.000544015 Down 0.7633696 2.968201 3.220038 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25970_c4_g3_i1 13.74174132 20.93160472 6.551877932 0.313013647 -1.675702536 0.021859349 0.072778452 Down 2.264422 5.623367 5.464202 1.107076 2.251397 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25978_c1_g5_i1 313.1725824 137.130166 489.2149988 3.567522836 1.834922665 2.37E-08 2.85E-07 Up 19.22072 16.49209 8.819516 32.72544 42.73629 52.96318 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25978_c1_g6_i1 141.1911419 188.6808367 93.70144709 0.496613481 -1.00980467 0.000264022 0.001597114 Down 6.893245 8.037713 5.315697 2.974266 1.8703 3.281815 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25978_c1_g8_i1 117.7112286 169.7100657 65.71239152 0.387203854 -1.368834782 2.37E-08 2.85E-07 Down 34.12208 42.60432 33.04978 14.26461 9.626656 10.36107 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25981_c1_g1_i1 5.88229065 10.66205375 1.102527553 0.103406677 -3.273598744 0.014652109 0.052378578 Down 2.01367 3.558304 0.9402856 0.4441707 8.97E-16 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25981_c2_g1_i3 76.30383251 131.1851019 21.4225631 0.163300274 -2.614400883 4.19E-16 1.05E-14 Down 11.45862 10.02277 11.97163 0.9829595 1.034956 2.444094 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25981_c3_g1_i1 8.576081668 17.15216334 0 0 #NAME? 4.86E-06 4.15E-05 Down 1.289804 1.88976 2.449147 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25992_c1_g1_i1 35.52831693 65.77336255 5.283271298 0.080325395 -3.638000028 2.46E-12 4.60E-11 Down 3.769305 4.314916 2.960319 2.45E-35 0.2215845 0.4546878 XP_011084074.1 triphosphate tunel metalloenzyme 3 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN259_c0_g1_i1 10.24330961 20.10083088 0.385788347 0.019192657 -5.703301762 4.64E-06 3.99E-05 Down 1.720408 1.73782 1.630751 0 0 0.08395557 XP_018722005.1 PREDICTED: uncharacterized protein LOC108956674 [Eucalyptus grandis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN25_c0_g1_i1 6.729754924 0 13.45950985 Inf Inf 3.16E-05 0.000233072 Up 0 0 0 0.6986809 1.019576 1.499149 AOQ04091.1 "Ca-P60A-RB, partial [synthetic construct]" Q9SY55|ECA3_ARATH "Calcium-transporting ATPase 3, endoplasmic reticulum-type OS=Arabidopsis thaliana OX=3702 GN=ECA3 PE=2 SV=3" -- -- -- -- -- -- KOG0202 Ca2+ transporting ATPase [P] METABOLISM Inorganic ion transport and metabolism P COG0474 P-type atpase "Cellular Component: Golgi membrane (GO:0000139);|Molecular Function: calcium-transporting ATPase activity (GO:0005388);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: endosome (GO:0005768);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Biological Process: calcium ion transport (GO:0006816);|Biological Process: cellular calcium ion homeostasis (GO:0006874);|Molecular Function: proton-exporting ATPase activity, phosphorylative mechanism (GO:0008553);|Cellular Component: endomembrane system (GO:0012505);|Molecular Function: manganese-transporting ATPase activity (GO:0015410);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: late endosome membrane (GO:0031902);|Cellular Component: sarcoplasmic reticulum membrane (GO:0033017);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: root development (GO:0048364);|Biological Process: manganese ion homeostasis (GO:0055071);|Biological Process: calcium ion transmembrane transport (GO:0070588);" PF00122.19 E1-E2 ATPase TRINITY_DN26012_c0_g1_i4 57.65856228 79.65100109 35.66612347 0.447779977 -1.159138076 0.000944263 0.004962135 Down 3.945162 3.040371 2.495739 1.542458 0.828751 1.05588 XP_011090519.1 uncharacterized protein LOC105171186 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z00Z NA -- -- -- TRINITY_DN26024_c0_g5_i1 16.09249678 23.16651899 9.018474577 0.389289154 -1.361085945 0.045552763 0.131604923 Down 4.874325 6.788563 2.695381 1.522884 0.7626438 2.281959 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26031_c0_g3_i1 46.1205848 92.2411696 0 0 #NAME? 2.58E-12 4.82E-11 Down 13.788 21.30049 8.957995 3.62E-68 6.31E-61 3.80E-51 EYU22915.1 hypothetical protein MIMGU_mgv1a001538mg [Erythranthe guttata] Q8L751|ORP1C_ARATH Oxysterol-binding protein-related protein 1C OS=Arabidopsis thaliana OX=3702 GN=ORP1C PE=2 SV=1 rcu:8274133 K20456 OSBP oxysterol-binding protein 1 -- -- KOG1737 Oxysterol-binding protein [I] METABOLISM Lipid transport and metabolism S ENOG410XP9E Oxysterol-binding protein Cellular Component: cytosol (GO:0005829);|Molecular Function: lipid binding (GO:0008289);|Molecular Function: sterol transporter activity (GO:0015248);|Cellular Component: membrane (GO:0016020);|Molecular Function: sterol binding (GO:0032934);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231); -- -- TRINITY_DN26031_c0_g4_i1 19.66724566 39.33449132 0 0 #NAME? 7.03E-05 0.000481554 Down 2.652652 9.798157 3.75742 2.93E-77 1.07E-75 2.93E-52 PON67795.1 Oxysterol-binding protein [Trema orientale] Q8L751|ORP1C_ARATH Oxysterol-binding protein-related protein 1C OS=Arabidopsis thaliana OX=3702 GN=ORP1C PE=2 SV=1 pop:POPTR_0005s16130g K20456 OSBP oxysterol-binding protein 1 -- -- KOG1737 Oxysterol-binding protein [I] METABOLISM Lipid transport and metabolism S ENOG410XP9E Oxysterol-binding protein Cellular Component: cytosol (GO:0005829);|Molecular Function: lipid binding (GO:0008289);|Molecular Function: sterol transporter activity (GO:0015248);|Cellular Component: membrane (GO:0016020);|Molecular Function: sterol binding (GO:0032934);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231); -- -- TRINITY_DN26036_c1_g2_i1 31.11232306 11.41369277 50.81095336 4.45175408 2.154373899 5.42E-06 4.59E-05 Up 1.352678 2.152951 0.8625178 5.110957 5.518506 4.793793 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26040_c0_g1_i1 1106.941779 517.1780224 1696.705536 3.280699223 1.714003332 1.39E-73 2.54E-71 Up 16.45734 17.69169 17.06658 43.86659 45.98548 45.76109 PIN10298.1 hypothetical protein CDL12_17110 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y8WV nodulin family -- "PF06813.12,PF07690.15" Nodulin-like|Major Facilitator Superfamily TRINITY_DN26044_c0_g3_i1 45.9795754 61.74099834 30.21815246 0.489434141 -1.030813355 0.048644735 0.138571099 Down 7.225124 5.336076 3.599604 0.7978997 2.722932 2.881071 XP_012848788.1 PREDICTED: stem-specific protein TSJT1-like [Erythranthe guttata] P24805|TSJT1_TOBAC Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YD56 Stem-specific protein -- -- -- TRINITY_DN26046_c2_g1_i1 17.67977438 4.758955973 30.60059279 6.430106302 2.684842588 0.000101648 0.000673492 Up 3.01E-49 0.3875095 0.7217655 2.006397 2.417918 1.170784 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26046_c3_g5_i1 20.79105506 0 41.58211011 Inf Inf 5.36E-15 1.24E-13 Up 0 0 0 3.009599 2.817448 2.71261 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26046_c3_g6_i1 24.23725547 11.99730646 36.47720447 3.040449504 1.604284629 0.03903293 0.116329972 Up 0.4173725 1.185683 0.3588968 1.138867 2.670072 1.108327 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26046_c3_g7_i1 31.35894478 60.88034364 1.837545922 0.03018291 -5.050124292 3.86E-15 9.04E-14 Down 5.222696 4.772496 4.335548 0.320623 2.41E-24 2.81E-30 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26046_c3_g9_i1 125.3879989 207.285151 43.49084675 0.209811685 -2.252833069 6.92E-20 2.25E-18 Down 10.43623 13.06667 11.54599 0.9820878 1.859141 3.115771 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26050_c1_g1_i2 11.03988861 20.97724967 1.102527553 0.052558251 -4.249938923 3.29E-05 0.000241776 Down 2.994132 2.597164 2.098222 0.2800776 0 5.86E-22 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26050_c2_g4_i1 5.640795755 11.28159151 0 0 #NAME? 0.000433272 0.002486723 Down 1.650359 2.409484 1.249935 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26050_c2_g5_i1 26.41043432 40.49798734 12.32288129 0.304283795 -1.716510591 0.001713498 0.00840783 Down 5.66659 4.313377 2.796876 0.2997166 1.344271 1.506099 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26050_c3_g2_i1 48.52016159 97.04032318 0 0 #NAME? 1.07E-30 6.14E-29 Down 3.949271 3.567407 2.986898 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26052_c0_g1_i3 1395.605941 794.2057911 1997.006091 2.514469315 1.330253948 2.23E-42 1.92E-40 Up 27.65228 27.0858 26.84395 57.90942 56.5079 50.97888 CDP16662.1 unnamed protein product [Coffea canephora] Q9FKS8|LHT1_ARATH Lysine histidine transporter 1 OS=Arabidopsis thaliana OX=3702 GN=LHT1 PE=1 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Molecular Function: symporter activity (GO:0015293);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: amino acid import (GO:0043090);|Biological Process: response to karrikin (GO:0080167); "PF01490.17,PF03222.12" Transmembrane amino acid transporter protein|Tryptophan/tyrosine permease family TRINITY_DN26054_c0_g4_i1 27.71615523 42.8779647 12.55434575 0.292792483 -1.77204958 0.000467292 0.00265912 Down 2.896029 2.142003 3.277321 0.2820184 1.12209 0.5717145 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26064_c0_g1_i2 70.9961847 102.4975488 39.49482056 0.385324537 -1.375854037 8.21E-06 6.74E-05 Down 3.446478 3.076713 3.714548 1.000045 0.9501206 1.237002 XP_011076493.1 protein HOTHEAD [Sesamum indicum] Q9S746|HTH_ARATH Protein HOTHEAD OS=Arabidopsis thaliana OX=3702 GN=HTH PE=1 SV=1 -- -- -- -- -- -- KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) [R] POORLY CHARACTERIZED General function prediction only E COG2303 oxidoreductase "Cellular Component: extracellular region (GO:0005576);|Biological Process: cell-cell signaling (GO:0007267);|Biological Process: embryo sac development (GO:0009553);|Biological Process: fatty acid omega-oxidation (GO:0010430);|Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614);|Molecular Function: mandelonitrile lyase activity (GO:0046593);|Molecular Function: flavin adenine dinucleotide binding (GO:0050660);" "PF00732.18,PF05199.12,PF01266.23" GMC oxidoreductase|GMC oxidoreductase|FAD dependent oxidoreductase TRINITY_DN26069_c3_g5_i4 110.90137 68.9457366 152.8570033 2.217062445 1.148649405 0.003206838 0.014467104 Up 8.802618 3.676769 4.83752 13.42236 8.635863 8.96439 XP_012844269.1 PREDICTED: F-box protein At3g08750-like [Erythranthe guttata] Q9T0J4|FB249_ARATH Putative F-box protein At4g38870 OS=Arabidopsis thaliana OX=3702 GN=At4g38870 PE=4 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF00646.32,PF12937.6" F-box domain|F-box-like TRINITY_DN26074_c0_g1_i5 86.93128161 151.2652466 22.5973166 0.149388687 -2.742857195 1.84E-17 5.07E-16 Down 3.680833 2.806275 2.60082 0.4928899 0.3175114 0.2831997 XP_012829375.1 PREDICTED: putative disease resistance protein RGA3 [Erythranthe guttata] Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Biological Process: defense response (GO:0006952);|Molecular Function: ADP binding (GO:0043531); "PF00931.21,PF13191.5" NB-ARC domain|AAA ATPase domain TRINITY_DN2607_c0_g1_i1 5.164777469 0.738117137 9.591437801 12.99446568 3.699825407 0.012109096 0.044648542 Up 0 0 0.3202127 2.303152 0.9866103 0.6878258 ACL90493.1 Dip-B-PA [synthetic construct] -- -- -- -- -- -- -- -- KOG2597 Predicted aminopeptidase of the M17 family [R] POORLY CHARACTERIZED General function prediction only E COG0260 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity) -- -- -- TRINITY_DN2607_c1_g1_i1 3.996704854 0.492078091 7.501331618 15.24418939 3.930187532 0.025848326 0.083463726 Up 0 0 0.2733512 0.5648837 0.849828 1.556262 ACL90493.1 Dip-B-PA [synthetic construct] -- -- -- -- -- -- -- -- KOG2597 Predicted aminopeptidase of the M17 family [R] POORLY CHARACTERIZED General function prediction only E COG0260 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity) -- PF00883.20 "Cytosol aminopeptidase family, catalytic domain" TRINITY_DN26083_c2_g1_i1 18.19479111 32.75668196 3.632900253 0.110905624 -3.172595569 7.39E-06 6.13E-05 Down 3.119483 4.811272 3.271556 0.1891946 0.7554289 9.06E-74 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26083_c2_g5_i1 72.03274206 143.3304658 0.735018369 0.005128138 -7.607349276 2.38E-40 1.93E-38 Down 17.10031 12.06517 13.54002 0.1519611 7.43E-33 1.06E-35 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26083_c2_g6_i3 145.8486455 197.309369 94.38792197 0.478375266 -1.063785296 2.13E-05 0.000162426 Down 13.01892 18.08123 17.69651 4.338459 6.482238 8.087809 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26083_c2_g7_i1 10.14629457 15.4418531 4.850736046 0.314129141 -1.670570311 0.049427912 0.140379229 Down 0.8902994 2.599349 1.981279 0.9864242 1.40E-06 0.4001295 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2608_c0_g1_i1 7.396094389 14.79218878 0 0 #NAME? 2.89E-05 0.00021443 Down 1.970279 2.904543 3.159018 0 0 0 KHN30958.1 "Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Glycine soja]" Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN26091_c0_g5_i1 15.03038986 21.89227244 8.168507286 0.373122859 -1.422277346 0.03835083 0.114650896 Down 4.679746 1.556092 3.924541 1.556208 0.6975023 0.8567913 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26091_c0_g7_i1 11.26878503 18.14364101 4.393929049 0.242174602 -2.045880522 0.030456548 0.095378688 Down 1.531974 2.987527 5.01281 0 1.457474 0.3565785 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26103_c1_g2_i1 76.58968348 153.179367 0 0 #NAME? 4.68E-21 1.65E-19 Down 19.83577 31.19724 17.6072 2.45E-25 0.000225599 2.11E-39 PIN08832.1 hypothetical protein CDL12_18589 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YCVB expressed protein -- -- -- TRINITY_DN26103_c1_g3_i1 39.83416199 79.66832398 0 0 #NAME? 1.94E-25 8.68E-24 Down 6.849299 5.316666 5.608441 5.45E-31 1.87E-38 8.84E-47 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26103_c1_g4_i1 27.77764086 52.85476329 2.700518427 0.051093189 -4.290725196 0.024504416 0.07993166 Down 2.934933 17.83787 4.712745 9.63E-19 2.21E-41 1.117492 XP_011092675.1 uncharacterized protein LOC105172794 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YCVB expressed protein -- -- -- TRINITY_DN26103_c1_g5_i1 10.65375141 21.30750282 0 0 #NAME? 3.43E-07 3.52E-06 Down 4.568837 4.9077 2.425625 3.70E-21 5.83E-42 0.001589501 XP_011092675.1 uncharacterized protein LOC105172794 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YCVB expressed protein -- -- -- TRINITY_DN26117_c0_g2_i1 26.15776792 36.22335027 16.09218557 0.444248957 -1.170559706 0.027461627 0.087755767 Down 4.394134 4.224013 1.98244 1.130876 0.9542039 1.734946 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26117_c0_g6_i1 7.781775041 15.56355008 0 0 #NAME? 1.74E-05 0.000135203 Down 3.36077 2.80912 3.503816 5.23E-68 5.54E-53 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26125_c0_g2_i1 7.622174886 14.87684059 0.367509184 0.024703443 -5.339144057 0.000190259 0.001188608 Down 3.665064 2.382687 1.31598 0.1727097 0 0 XP_011082028.2 glutamate receptor 2.7-like [Sesamum indicum] -- -- sind:105164905 K05387 GRIP "glutamate receptor, ionotropic, plant" -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26128_c0_g2_i2 24.88582574 35.52720041 14.24445107 0.400944935 -1.31852398 0.009570969 0.036737356 Down 1.72332 2.1832 3.005419 0.8551253 0.3384059 1.014561 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26129_c0_g1_i10 2776.86889 223.0495677 5330.688213 23.89911924 4.578885546 0 0 Up 7.178226 7.355048 7.710822 144.1093 143.2756 141.2112 XP_011081683.1 "zinc transporter 4, chloroplastic [Sesamum indicum]" O04089|ZIP4_ARATH "Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ZIP4 PE=2 SV=1" sind:105164670 K14709 "SLC39A1_2_3, ZIP1_2_3" "solute carrier family 39 (zinc transporter), member 1/2/3" -- -- KOG1558 Fe2+/Zn2+ regulated transporter [P] METABOLISM Inorganic ion transport and metabolism P ENOG4111GP2 zinc transporter Molecular Function: zinc ion transmembrane transporter activity (GO:0005385);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: integral component of membrane (GO:0016021); PF02535.21 ZIP Zinc transporter TRINITY_DN26129_c0_g2_i2 63.56167324 0.976834689 126.1465118 129.1380346 7.012770165 1.16E-08 1.46E-07 Up 0.3763723 0 0 12.51487 5.397147 17.69377 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26131_c0_g1_i1 7.948241569 15.89648314 0 0 #NAME? 1.28E-05 0.00010151 Down 2.020066 1.827041 2.711482 5.40E-91 1.97E-90 0 XP_016483587.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Nicotiana tabacum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZCAC Pfam:hATC -- -- -- TRINITY_DN26131_c1_g1_i1 140.9805428 65.69802875 216.2630568 3.291773907 1.718865249 1.33E-14 2.97E-13 Up 1.616196 1.579775 1.429015 4.226805 4.265922 3.78478 PIN14737.1 Trehalose-6-phosphate synthase component TPS1 [Handroanthus impetiginosus] Q9ZV48|TPS11_ARATH "Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana OX=3702 GN=TPS11 PE=2 SV=1" sind:105155653 K16055 TPS trehalose 6-phosphate synthase/phosphatase ko00500 Starch and sucrose metabolism KOG1050 Trehalose-6-phosphate synthase component TPS1 and related subunits [G] METABOLISM Carbohydrate transport and metabolism G COG1877 trehalose biosynthetic process "Cellular Component: cytoplasm (GO:0005737);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: cytosol (GO:0005829);|Biological Process: trehalose biosynthetic process (GO:0005992);|Biological Process: dephosphorylation (GO:0016311);|Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);|Biological Process: trehalose metabolism in response to stress (GO:0070413);" "PF00982.20,PF02358.15,PF08282.11" Glycosyltransferase family 20|Trehalose-phosphatase|haloacid dehalogenase-like hydrolase TRINITY_DN26132_c0_g2_i2 16.94884048 24.59290442 9.30477653 0.37835208 -1.40219872 0.029655116 0.09333314 Down 1.863876 2.209284 2.074031 0.5300305 0.6643525 0.6876202 PIN24338.1 Serine/threonine protein kinase [Handroanthus impetiginosus] O48788|Y2267_ARATH Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana OX=3702 GN=At2g26730 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111F0S inactive receptor kinase -- -- -- TRINITY_DN26134_c0_g1_i17 588.4722894 375.5677798 801.376799 2.133774094 1.093407444 4.19E-21 1.49E-19 Up 13.9156 14.2424 12.79917 23.62827 22.71819 24.1462 AMZ03391.1 cytochrome P450 CYP76AH9 [Plectranthus barbatus] S4UX02|CYPH1_SALMI Ferruginol synthase OS=Salvia miltiorrhiza OX=226208 GN=CYP76AH1 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN26135_c0_g3_i3 18.89580576 37.42410233 0.367509184 0.00982012 -6.670043597 2.65E-11 4.50E-10 Down 2.788306 3.976248 3.679007 0.1135238 1.23E-49 1.44E-44 XP_012848462.1 PREDICTED: uncharacterized protein LOC105968380 [Erythranthe guttata] Q9FXJ2|GDL7_ARATH GDSL esterase/lipase At1g28580 OS=Arabidopsis thaliana OX=3702 GN=At1g28580 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG3240 GDSL esterase lipase "Cellular Component: extracellular region (GO:0005576);|Cellular Component: vacuole (GO:0005773);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);" -- -- TRINITY_DN26139_c1_g2_i1 47.79454612 65.78604386 29.80304838 0.453029953 -1.142321654 0.002634508 0.012218052 Down 3.990828 4.480358 4.571119 1.415269 0.5667708 2.81515 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26139_c1_g3_i1 24.50778063 38.43038018 10.58518108 0.275437844 -1.8602013 0.000945873 0.004968871 Down 4.61355 4.168198 2.333355 0.6996626 0.2312699 1.573548 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26139_c2_g1_i1 25.40090956 44.38965052 6.412168595 0.144451883 -2.791339086 0.000258499 0.001566416 Down 3.751564 9.44333 10.25397 1.216565 8.13E-05 1.476118 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26148_c1_g1_i5 534.2100399 192.4303097 875.9897702 4.552244247 2.186577966 1.04E-65 1.63E-63 Up 7.305026 8.434798 9.098962 32.03044 27.83893 31.37359 RLN00919.1 actin-97 [Panicum miliaceum] P0C539|ACT2_ORYSI Actin-2 OS=Oryza sativa subsp. indica OX=39946 GN=ACT2 PE=3 SV=1 zma:100280540 K10355 ACTF "actin, other eukaryote" -- -- KOG0676 Actin and related proteins [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5277 Actin-related protein Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytoskeleton (GO:0005856); PF00022.18 Actin TRINITY_DN26148_c2_g2_i1 57.47771554 0 114.9554311 Inf Inf 5.18E-40 4.15E-38 Up 7.64E-48 1.98E-92 5.15E-68 13.32801 9.911916 12.35228 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26153_c0_g3_i5 14.24733767 25.84126313 2.653412205 0.102681211 -3.283755872 4.06E-05 0.000292526 Down 2.344767 3.198972 2.66718 0 0.2029774 0.4528075 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26162_c0_g1_i1 12.34336242 19.06722874 5.619496106 0.294720129 -1.762582499 0.025541233 0.082660289 Down 2.869175 5.214348 2.274058 0.6374651 0.6400399 1.231528 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26165_c1_g1_i4 166.1827348 306.2403296 26.12513991 0.085309273 -3.55115362 1.28E-37 9.39E-36 Down 35.98667 33.93158 42.94673 1.009617 1.459551 5.395395 XP_023735634.1 uncharacterized protein LOC111883545 [Lactuca sativa] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26165_c1_g2_i2 359.1340494 666.0590181 52.20908075 0.078385067 -3.673277355 2.88E-101 7.43E-99 Down 47.04088 50.11575 42.62391 3.541463 3.985767 1.305321 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26165_c1_g3_i2 72.23324252 139.1202857 5.346199367 0.038428611 -4.701675351 3.10E-31 1.82E-29 Down 20.41516 21.74511 17.6758 0.4170317 4.73E-51 1.480943 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26165_c1_g4_i1 64.63747099 123.8414134 5.433528533 0.043874891 -4.510460644 9.67E-27 4.66E-25 Down 29.18874 21.18272 25.09953 5.04E-16 2.608117 1.01E-16 XP_023760264.1 uncharacterized protein LOC111908693 [Lactuca sativa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBST Mariner sub-class -- -- -- TRINITY_DN26170_c1_g2_i1 4.142956762 0 8.285913525 Inf Inf 0.003749246 0.016558623 Up 0 0 0 0.3371981 1.352614 2.619346 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26174_c0_g1_i6 52.24084127 103.7101058 0.771576693 0.007439745 -7.070531201 2.43E-23 9.70E-22 Down 3.777538 4.323173 2.573409 0 0 0.04940599 XP_012853800.1 PREDICTED: uncharacterized protein LOC105973324 [Erythranthe guttata] P93295|M310_ARATH Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111Y55 Reverse transcriptase (RNA-dependent DNA polymerase) Cellular Component: mitochondrion (GO:0005739); PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN26174_c0_g2_i1 67.73270587 134.7409413 0.724470471 0.005376766 -7.53904568 5.65E-28 2.88E-26 Down 8.053329 5.255249 8.068539 0 0.09445073 0 GAU30026.1 hypothetical protein TSUD_161120 [Trifolium subterraneum] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN26174_c0_g3_i1 48.47109215 96.9421843 0 0 #NAME? 8.01E-31 4.64E-29 Down 5.235312 3.762334 4.584 0 0 0 XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y1CH Reverse transcriptase (RNA-dependent DNA polymerase) -- PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN26185_c0_g3_i2 28.72083407 41.48834392 15.95332422 0.384525453 -1.378848998 0.009696256 0.037123999 Down 3.617364 2.558961 1.658936 0.5018692 1.087012 0.8452892 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26189_c0_g1_i2 15.67000652 23.14795263 8.192060397 0.353899998 -1.49858634 0.024731198 0.080497867 Down 3.619925 1.864338 3.758617 1.283312 0.501673 0.8458454 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26189_c0_g2_i11 74.91646266 149.097907 0.735018369 0.00492977 -7.664263985 1.21E-43 1.08E-41 Down 8.484047 7.98008 7.220122 0.0844472 2.38E-37 2.19E-56 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26189_c0_g4_i1 694.7835811 1205.768083 183.7990797 0.152433194 -2.713750998 1.49E-113 4.57E-111 Down 38.14888 37.59538 37.67381 3.851567 4.915626 5.203212 XP_012840649.1 PREDICTED: probable inactive receptor kinase At1g27190 [Erythranthe guttata] O04567|Y1719_ARATH Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana OX=3702 GN=At1g27190 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN2618_c0_g1_i1 26.19813976 52.39627953 0 0 #NAME? 4.16E-17 1.13E-15 Down 3.764369 5.287878 5.400018 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN261_c0_g1_i1 12.01346962 4.778678253 19.24826099 4.027946634 2.010044569 0.021455916 0.071671822 Up 0.8367962 0.4084481 0.9842222 3.984743 1.592387 1.664785 XP_022874000.1 uncharacterized protein LOC111392838 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26200_c0_g1_i19 825.9327683 1217.658616 434.206921 0.356591671 -1.487655087 4.38E-46 4.22E-44 Down 30.40479 31.09277 31.45429 9.190559 8.757888 8.819198 XP_011101981.1 "2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial isoform X2 [Sesamum indicum]" Q84JL2|ODBA2_ARATH "2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g09300 PE=1 SV=1" sind:105180006 K00166 "BCKDHA, bkdA1" 2-oxoisovalerate dehydrogenase E1 component alpha subunit ko00640|ko00280 "Propanoate metabolism|Valine, leucine and isoleucine degradation" KOG1182 "Branched chain alpha-keto acid dehydrogenase complex, alpha subunit" [C] METABOLISM Energy production and conversion C COG1071 Dehydrogenase Molecular Function: alpha-ketoacid dehydrogenase activity (GO:0003826);|Molecular Function: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity (GO:0003863);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial alpha-ketoglutarate dehydrogenase complex (GO:0005947);|Biological Process: branched-chain amino acid catabolic process (GO:0009083);|Molecular Function: metal ion binding (GO:0046872); PF00676.19 Dehydrogenase E1 component TRINITY_DN26202_c0_g1_i2 65.67083702 33.33877167 98.00290238 2.939607474 1.555623525 1.58E-06 1.47E-05 Up 1.9387 1.721395 1.861489 3.489916 4.357915 5.182221 XP_011094007.1 putative transcription factor bHLH041 [Sesamum indicum] Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana OX=3702 GN=BHLH41 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YFS3 Transcription factor "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: response to chitin (GO:0010200);|Molecular Function: protein dimerization activity (GO:0046983);" PF00010.25 Helix-loop-helix DNA-binding domain TRINITY_DN26207_c1_g2_i1 86.62552378 156.0173188 17.23372877 0.110460357 -3.178399397 2.67E-14 5.79E-13 Down 6.809361 4.778184 4.52658 0.306534 0.4132002 0.7024167 XP_023760264.1 uncharacterized protein LOC111908693 [Lactuca sativa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBST Mariner sub-class -- -- -- TRINITY_DN26209_c1_g3_i1 50.36316181 88.29429875 12.43202488 0.140802125 -2.828258988 2.74E-12 5.10E-11 Down 6.522443 8.624794 9.339915 1.802256 0.9304906 2.80E-05 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26211_c0_g1_i2 89.48891882 122.0967031 56.88113453 0.465869537 -1.102002099 6.37E-05 0.00044039 Down 8.160218 8.651622 7.05377 3.685839 1.414451 3.915844 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26213_c0_g1_i2 370.1055556 124.9891642 615.221947 4.922202263 2.299303942 5.89E-53 6.96E-51 Up 7.170084 9.140456 9.993142 32.58113 37.41927 34.5403 XP_011071553.1 uncharacterized GPI-anchored protein At3g06035-like [Sesamum indicum] Q84MC0|UGPI4_ARATH Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YJI0 (GPI)-anchored protein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: anchored component of membrane (GO:0031225); -- -- TRINITY_DN26218_c0_g2_i1 9.720612273 16.13364189 3.307582659 0.205011533 -2.286223022 0.012456338 0.045709828 Down 2.315448 3.380312 2.990271 1.375987 2.63E-87 1.21E-42 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26218_c0_g3_i4 11.71944238 4.51911732 18.91976744 4.186606831 2.065781439 0.010830055 0.040642251 Up 0.6152418 0.5955015 0.9348061 2.911973 1.986056 2.009125 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26221_c0_g1_i1 27289.1887 5.249912963 54573.1275 10395.05376 13.3436096 0 0 Up 0.04426957 0.02393766 0.037261 306.1847 294.7432 293.3547 ABK27329.1 polyprotein [Reporter vector pCBTuMV-GFP] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF00851.17,PF00680.19,PF08440.9,PF13608.5,PF00863.18,PF00767.17,PF01577.15,PF00271.30,PF07652.13,PF00270.28" Helper component proteinase|RNA dependent RNA polymerase|Potyviridae polyprotein|Protein P3 of Potyviral polyprotein|Peptidase family C4|Potyvirus coat protein|Potyvirus P1 protease|Helicase conserved C-terminal domain|Flavivirus DEAD domain|DEAD/DEAH box helicase TRINITY_DN26222_c0_g2_i2 158.2140747 311.4965654 4.93158396 0.015831905 -5.98102135 3.12E-79 6.28E-77 Down 16.99567 16.28178 17.23793 0.07213382 0.07171255 0.4722216 PIM97971.1 putative mitochondrial DNA helicase twinkle [Handroanthus impetiginosus] B5X582|TWIH_ARATH "Twinkle homolog protein, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g30680 PE=1 SV=1" sind:105175814 K17680 PEO1 twinkle protein -- -- -- -- -- -- -- L ENOG410ZVWQ TOPRIM domain-containing protein Molecular Function: single-stranded DNA binding (GO:0003697);|Molecular Function: DNA primase activity (GO:0003896);|Molecular Function: ATP-dependent DNA helicase activity (GO:0004003);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: ribonucleotide biosynthetic process (GO:0009260);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN26226_c0_g1_i1 63.80078147 113.8996814 13.70188153 0.120297804 -3.05531779 9.71E-17 2.56E-15 Down 19.47192 20.37392 18.4039 3.210575 1.189503 1.289087 XP_011085465.2 leucine-rich repeat receptor-like protein kinase PEPR2 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat -- -- -- TRINITY_DN26226_c0_g4_i3 58.77489877 114.2109305 3.338867035 0.029234216 -5.096198278 1.12E-27 5.66E-26 Down 4.152028 4.345261 4.817964 0.2133417 0.0414095 0.08757252 XP_011074920.1 protein SCARECROW-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBEA GRAS domain family -- -- -- TRINITY_DN26233_c0_g3_i1 8.883746436 15.52342212 2.244070747 0.144560312 -2.790256569 0.005852702 0.024253397 Down 4.054888 1.528154 1.838017 0.00019307 0.4574884 0.4473982 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26238_c0_g3_i1 35.45854847 70.91709693 0 0 #NAME? 1.37E-22 5.22E-21 Down 7.851824 7.179346 5.028763 1.69E-73 6.78E-73 5.00E-64 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26240_c1_g1_i1 76.84089831 153.6817966 0 0 #NAME? 2.86E-48 2.95E-46 Down 14.82806 15.69561 16.72415 0 0 2.05E-78 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26240_c1_g2_i1 20.43318597 40.86637195 0 0 #NAME? 5.70E-09 7.41E-08 Down 3.223273 7.085289 3.650382 0 0 3.61E-94 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26243_c0_g1_i1 221.7419687 323.7807919 119.7031455 0.369704283 -1.435556338 1.47E-15 3.53E-14 Down 12.13511 10.8214 13.17125 3.383055 3.646112 3.770788 XP_011074389.1 probable serine/threonine-protein kinase At1g01540 [Sesamum indicum] Q3EDL4|Y1154_ARATH Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN26247_c0_g2_i1 22.30703716 9.697900361 34.91617395 3.600384893 1.848151144 0.033618668 0.103468181 Up 0 1.639738 3.869457 3.797268 3.724883 8.3976 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26251_c0_g2_i8 194.1213007 285.4478672 102.7947343 0.360117367 -1.473460919 1.91E-14 4.20E-13 Down 12.44099 10.98514 12.85029 3.202212 3.908058 3.405912 PIN17237.1 hypothetical protein CDL12_10116 [Handroanthus impetiginosus] Q84JK2|FD_ARATH Protein FD OS=Arabidopsis thaliana OX=3702 GN=FD PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YWQ7 Transcription factor "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: photoperiodism (GO:0009648);|Biological Process: regulation of flower development (GO:0009909);|Biological Process: positive regulation of flower development (GO:0009911);|Molecular Function: protein self-association (GO:0043621);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: regulation of photoperiodism, flowering (GO:2000028);" PF00170.20 bZIP transcription factor TRINITY_DN26252_c0_g1_i1 137.5042258 275.0084515 0 0 #NAME? 4.38E-84 9.51E-82 Down 4.657963 4.193548 4.001082 0 0 0 XP_020092846.1 uncharacterized protein LOC109713256 [Ananas comosus] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" "PF00078.26,PF00665.25,PF00385.23,PF13650.5" Reverse transcriptase (RNA-dependent DNA polymerase)|Integrase core domain|Chromo (CHRromatin Organisation MOdifier) domain|Aspartyl protease TRINITY_DN26252_c0_g2_i1 12.22618028 24.45236057 0 0 #NAME? 3.46E-08 4.08E-07 Down 2.33772 1.741532 1.258382 0 0 0 XP_012836036.1 PREDICTED: uncharacterized protein LOC105956698 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- -- -- TRINITY_DN26252_c0_g3_i1 7.998097547 14.11435958 1.881835511 0.133327729 -2.906951236 0.006421829 0.026221649 Down 1.874851 1.134592 1.224798 0 0.1410487 0.2999396 XP_016471099.1 PREDICTED: uncharacterized protein LOC107793286 [Nicotiana tabacum] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF00665.25 Integrase core domain TRINITY_DN26252_c0_g4_i1 4.109493091 8.218986183 0 0 #NAME? 0.003515717 0.015653649 Down 0.2039296 1.719691 1.240046 0 0 0 XP_012827980.1 PREDICTED: uncharacterized protein LOC105949233 [Erythranthe guttata] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" -- -- TRINITY_DN26258_c0_g2_i1 41.86727572 62.93330781 20.80124364 0.33052837 -1.597153989 0.000121804 0.000792465 Down 7.95187 6.065509 5.281472 1.211687 2.120227 1.865557 XP_011074223.1 AP-4 complex subunit mu [Sesamum indicum] Q9SB50|AP4M_ARATH AP-4 complex subunit mu OS=Arabidopsis thaliana OX=3702 GN=AP4M PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG410XPFS Adaptor-related protein complex Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: cytosol (GO:0005829);|Cellular Component: clathrin-coated pit (GO:0005905);|Biological Process: intracellular protein transport (GO:0006886);|Biological Process: vesicle-mediated transport (GO:0016192);|Cellular Component: AP-4 adaptor complex (GO:0030124);|Cellular Component: clathrin adaptor complex (GO:0030131); -- -- TRINITY_DN2625_c0_g1_i1 12.73652641 20.93780511 4.535247716 0.21660569 -2.206856956 0.00427639 0.018552819 Down 2.718141 4.678947 4.152743 0 0.6889531 1.415313 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26262_c0_g2_i1 8.882391243 17.76478249 0 0 #NAME? 2.09E-05 0.000159914 Down 2.038906 5.165242 2.271441 2.30E-98 0 5.36E-83 XP_011078707.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Sesamum indicum] -- -- -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein -- -- -- TRINITY_DN26262_c0_g3_i1 14.46699751 28.93399501 0 0 #NAME? 1.40E-09 1.96E-08 Down 3.799544 5.645092 2.689589 1.20E-45 1.73E-66 4.96E-60 XP_011078707.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26263_c0_g2_i1 5.562002639 11.12400528 0 0 #NAME? 0.000463862 0.002642252 Down 2.223001 1.544039 1.684757 0 0 0 XP_012832203.1 PREDICTED: pyruvate decarboxylase 1 [Erythranthe guttata] O82647|PDC1_ARATH Pyruvate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=PDC1 PE=2 SV=1 sind:105174592 K01568 "E4.1.1.1, pdc" pyruvate decarboxylase ko00010 Glycolysis / Gluconeogenesis KOG1184 Thiamine pyrophosphate-requiring enzyme [EH] METABOLISM|METABOLISM Amino acid transport and metabolism |Coenzyme transport and metabolism GH COG3961 Pyruvate decarboxylase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: pyruvate decarboxylase activity (GO:0004737);|Cellular Component: intracellular (GO:0005622);|Cellular Component: cytosol (GO:0005829);|Cellular Component: membrane (GO:0016020);|Molecular Function: carboxy-lyase activity (GO:0016831);|Molecular Function: thiamine pyrophosphate binding (GO:0030976);|Biological Process: response to anoxia (GO:0034059); PF02776.17 "Thiamine pyrophosphate enzyme, N-terminal TPP binding domain" TRINITY_DN26274_c0_g1_i1 161.2802425 218.2798921 104.2805929 0.477737972 -1.065708545 3.70E-07 3.79E-06 Down 5.944106 6.262847 5.213498 2.181919 2.395973 2.158232 XP_011092672.2 glycine-rich domain-containing protein 1 [Sesamum indicum] Q9ZQ47|GRDP1_ARATH Glycine-rich domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=GRDP1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XQR4 Protein of unknown function (DUF1399) Cellular Component: plasma membrane (GO:0005886);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: regulation of abscisic acid-activated signaling pathway (GO:0009787);|Biological Process: cellular response to osmotic stress (GO:0071470); PF07173.11 Glycine-rich domain-containing protein-like TRINITY_DN26276_c0_g2_i16 166.3045848 224.3495797 108.2595899 0.482548664 -1.051253653 4.59E-07 4.63E-06 Down 8.868368 11.11393 11.20054 2.988379 3.936086 5.294366 XP_016447455.1 "PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic-like [Nicotiana tabacum]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26277_c0_g2_i1 13.64934455 22.8783903 4.420298793 0.19320847 -2.371769751 0.002306192 0.01087296 Down 3.994319 2.527883 2.230344 0.5979639 0.6062918 0.2999172 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26278_c0_g2_i1 8.2182737 2.742756453 13.69379095 4.99271123 2.319823466 0.015371238 0.054468898 Up 3.88E-30 0.8862664 0.1081003 1.678677 1.389397 1.028414 XP_021851681.1 uncharacterized protein LOC110791241 [Spinacia oleracea] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN26278_c0_g4_i1 21.0075339 42.0150678 0 0 #NAME? 6.83E-14 1.45E-12 Down 2.730087 2.000196 3.405049 0 0 0 XP_022860306.1 uncharacterized protein LOC111380876 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN26278_c0_g7_i1 7.055431835 0 14.11086367 Inf Inf 1.80E-05 0.000139126 Up 0 0 0 2.251838 2.605322 2.434559 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26278_c1_g1_i1 11.7802633 19.1166747 4.443851904 0.232459461 -2.104948948 0.010435701 0.039419268 Down 1.653388 1.676471 1.308026 0.328759 0.2984616 0.238561 XP_022847100.1 "calcium uniporter protein 5, mitochondrial-like [Olea europaea var. sylvestris]" Q8VYR0|MCU5_ARATH "Calcium uniporter protein 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g57610 PE=2 SV=1" -- -- -- -- -- -- KOG2966 Uncharacterized conserved protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y3YU Coiled-coil domain containing 109B Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Molecular Function: uniporter activity (GO:0015292);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: mitochondrial calcium ion homeostasis (GO:0051560); -- -- TRINITY_DN26285_c1_g1_i17 90.45664607 141.0618696 39.85142253 0.282510239 -1.823624938 7.98E-11 1.28E-09 Down 5.235793 4.584413 5.807628 0.7991657 1.35037 1.431488 XP_011084005.1 protein RTF2 homolog [Sesamum indicum] P86888|PMLN_PRUPE Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1 -- -- -- -- -- -- KOG3113 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG41113CN replication termination factor 2 domain containing 1 -- -- -- TRINITY_DN26286_c0_g1_i6 65.18740602 20.82162512 109.5531869 5.26150991 2.395476873 4.80E-11 7.93E-10 Up 1.867933 1.697463 0.5625337 6.682444 4.280104 6.448816 PIN06318.1 putative unusual protein kinase [Handroanthus impetiginosus] -- -- sind:105176759 K08869 "ADCK, ABC1" aarF domain-containing kinase -- -- KOG1236 Predicted unusual protein kinase [R] POORLY CHARACTERIZED General function prediction only S COG0661 "Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)" -- -- -- TRINITY_DN26288_c0_g2_i3 37.37808997 53.04485757 21.71132236 0.409301172 -1.288765298 0.002254791 0.010662749 Down 4.83088 3.262742 4.63732 0.5697292 1.522736 2.113864 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26291_c1_g1_i1 14.38223227 28.02944617 0.735018369 0.026223079 -5.253019124 9.87E-06 7.99E-05 Down 4.075438 1.732556 2.005681 0.1333492 0 0 EPS60250.1 "hypothetical protein M569_14554, partial [Genlisea aurea]" A4PBL4|RAD54_ORYSJ DNA repair and recombination protein RAD54 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD54 PE=1 SV=1 sind:105169552 K10875 "RAD54L, RAD54" DNA repair and recombination protein RAD54 and RAD54-like protein ko03440 Homologous recombination -- -- -- -- -- -- -- -- Molecular Function: DNA binding (GO:0003677);|Molecular Function: helicase activity (GO:0004386);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: cell cycle (GO:0007049);|Biological Process: double-strand break repair via synthesis-dependent strand annealing (GO:0045003);|Biological Process: cell division (GO:0051301);|Biological Process: interaction with host (GO:0051701);|Biological Process: cellular response to metal ion (GO:0071248);|Biological Process: cellular response to gamma radiation (GO:0071480); -- -- TRINITY_DN26296_c0_g2_i1 46.21208046 74.76526884 17.65889207 0.236191113 -2.081973412 2.11E-07 2.23E-06 Down 7.003682 7.163524 5.493319 1.04098 0.7728181 2.015322 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26307_c0_g1_i1 6.328810373 12.29011156 0.367509184 0.029902836 -5.063573897 0.001076754 0.005575758 Down 1.988554 2.51716 0.6248961 0.1725888 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26307_c0_g7_i1 16.74738575 27.67791194 5.816859563 0.210162514 -2.250422729 0.001119199 0.005769223 Down 5.678447 3.552863 4.454207 0.5465062 1.672734 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26313_c0_g2_i3 270.7931303 540.1267717 1.45948884 0.002702123 -8.531691069 5.74E-152 2.63E-149 Down 13.05562 11.64066 12.78888 0.03987736 0.03930757 0 XP_023767508.1 uncharacterized protein LOC111916103 [Lactuca sativa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBST Mariner sub-class -- -- -- TRINITY_DN26316_c0_g1_i2 69.92017199 33.44890845 106.3914355 3.180714722 1.669350982 5.56E-08 6.36E-07 Up 1.760531 1.317381 0.9404945 3.494404 3.739876 3.075559 EYU20316.1 hypothetical protein MIMGU_mgv1a005882mg [Erythranthe guttata] Q8GYH5|BAD1_ARATH Ankyrin repeat-containing protein BDA1 OS=Arabidopsis thaliana OX=3702 GN=BAD1 PE=1 SV=1 -- -- -- -- -- -- KOG0504 FOG: Ankyrin repeat [R] POORLY CHARACTERIZED General function prediction only S COG0666 Ankyrin Repeat Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to salicylic acid (GO:0009751);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: innate immune response (GO:0045087); "PF12796.6,PF13637.5,PF13857.5,PF13606.5,PF00023.29,PF13962.5" Ankyrin repeats (3 copies)|Ankyrin repeats (many copies)|Ankyrin repeats (many copies)|Ankyrin repeat|Ankyrin repeat|Domain of unknown function TRINITY_DN26324_c0_g1_i5 70.4105723 45.50257948 95.31856511 2.094794761 1.066808902 0.000540684 0.003025923 Up 2.175607 1.198266 1.801853 2.809043 2.69746 3.263752 XP_011084544.1 AAA-ATPase At2g46620 [Sesamum indicum] F4IJ77|AATP4_ARATH AAA-ATPase At2g46620 OS=Arabidopsis thaliana OX=3702 GN=At2g46620 PE=2 SV=1 sind:105166766 K08900 BCS1 mitochondrial chaperone BCS1 -- -- KOG0743 AAA+-type ATPase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0465 "Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)" Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887); "PF00004.28,PF14363.5" ATPase family associated with various cellular activities (AAA)|Domain associated at C-terminal with AAA TRINITY_DN26325_c0_g2_i5 132.3152191 226.2328712 38.39756696 0.169725853 -2.558721762 6.87E-25 2.98E-23 Down 8.626087 8.136818 6.587823 0.9697574 0.9690721 1.276789 PIN12345.1 hypothetical protein CDL12_15045 [Handroanthus impetiginosus] -- -- sind:105171913 K12471 EPN epsin ko04144 Endocytosis -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26327_c1_g1_i1 243.4853329 155.4985123 331.4721536 2.131674115 1.0919869 1.00E-05 8.10E-05 Up 12.5599 7.079959 10.06106 15.0564 15.52794 20.5941 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26327_c2_g1_i9 2190.197338 941.0130856 3439.381591 3.654977432 1.869862498 3.97E-101 1.01E-98 Up 64.74068 60.02417 74.9718 183.2465 197.6959 208.6463 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26341_c2_g1_i1 2.580730074 5.161460148 0 0 #NAME? 0.036620008 0.110620352 Down 0.7568676 1.969892 0.3804374 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26348_c0_g2_i1 24.08324032 42.58600018 5.580480466 0.131040258 -2.931917989 8.74E-07 8.48E-06 Down 3.422078 3.312583 2.726712 0.6661755 0.0654567 0.2953077 PIN05863.1 putative RNA-binding protein Pno1p interacting with Nob1p and involved in 26S proteasome assembly [Handroanthus impetiginosus] -- -- sind:105176380 K11884 "PNO1, DIM2" RNA-binding protein PNO1 -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26350_c0_g1_i2 78.45246215 44.42909508 112.4758292 2.531580466 1.340038341 6.99E-06 5.81E-05 Up 0.6115791 0.9762649 1.028397 2.046609 1.64468 1.668166 XP_020548264.1 probable LRR receptor-like serine/threonine-protein kinase At1g74360 [Sesamum indicum] C0LGJ1|Y1743_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana OX=3702 GN=At1g74360 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF00069.24,PF13855.5,PF07714.16,PF12799.6,PF00560.32,PF08263.11,PF13516.5" Protein kinase domain|Leucine rich repeat|Protein tyrosine kinase|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine rich repeat N-terminal domain|Leucine Rich repeat TRINITY_DN26351_c0_g2_i1 11.60167268 18.74121429 4.462131066 0.238091886 -2.070409637 0.010316742 0.039062479 Down 3.528123 2.717816 4.515424 0.717144 0.7081886 0.7015189 -- -- Q8W5B1|VRN2_ARATH Polycomb group protein VERNALIZATION 2 OS=Arabidopsis thaliana OX=3702 GN=VRN2 PE=1 SV=2 -- -- -- -- -- -- KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor) [R] POORLY CHARACTERIZED General function prediction only -- -- -- Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: chromatin silencing complex (GO:0005677);|Biological Process: regulation of gene expression by genetic imprinting (GO:0006349);|Biological Process: response to cold (GO:0009409);|Biological Process: vernalization response (GO:0010048);|Molecular Function: chromatin DNA binding (GO:0031490);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN26354_c0_g5_i1 9.90994988 0.984156182 18.83574358 19.13897805 4.258441893 6.99E-05 0.000478853 Up 0 0 0.5836316 2.912969 4.58077 2.402416 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26355_c0_g1_i1 29.53971932 46.30699294 12.77244569 0.275821099 -1.858195274 0.020245216 0.068438418 Down 5.110016 8.862677 12.36093 9.38E-19 5.129223 0.6436959 XP_012850356.1 PREDICTED: rho GTPase-activating protein 1 [Erythranthe guttata] Q9CAX8|RGAP4_ARATH Rho GTPase-activating protein 4 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP4 PE=2 SV=1 -- -- -- -- -- -- KOG4270 GTPase-activator protein [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XRR2 rho GTPase activating protein Molecular Function: GTPase activator activity (GO:0005096);|Biological Process: signal transduction (GO:0007165);|Biological Process: response to anoxia (GO:0034059); -- -- TRINITY_DN26368_c0_g2_i1 5.752833037 11.50566607 0 0 #NAME? 0.010352178 0.039179289 Down 3.482127 2.578735 9.27E-49 1.48E-57 3.45E-64 0 O48561.1 RecName: Full=Catalase-4 O48561|CATA4_SOYBN Catalase-4 OS=Glycine max OX=3847 GN=CAT4 PE=2 SV=1 gmx:547511 K03781 "katE, CAT, catB, srpA" catalase ko00380|ko00630|ko04146 Tryptophan metabolism|Glyoxylate and dicarboxylate metabolism|Peroxisome KOG0047 Catalase [P] METABOLISM Inorganic ion transport and metabolism P COG0753 Catalase Molecular Function: catalase activity (GO:0004096);|Cellular Component: glyoxysome (GO:0009514);|Molecular Function: heme binding (GO:0020037);|Biological Process: response to hydrogen peroxide (GO:0042542);|Biological Process: hydrogen peroxide catabolic process (GO:0042744);|Molecular Function: metal ion binding (GO:0046872); PF00199.18 Catalase TRINITY_DN26373_c0_g1_i5 267.7278661 381.5334783 153.9222539 0.403430531 -1.309607824 5.19E-09 6.79E-08 Down 12.46235 11.14233 15.29866 5.05063 3.906648 3.700433 EYU43344.1 hypothetical protein MIMGU_mgv11b018117mg [Erythranthe guttata] C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana OX=3702 GN=EFR PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF13855.5,PF12799.6,PF00560.32,PF08263.11,PF13516.5" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine rich repeat N-terminal domain|Leucine Rich repeat TRINITY_DN26379_c0_g2_i1 8.813819806 16.15760288 1.470036737 0.090981116 -3.458289063 0.001034466 0.005380715 Down 3.383203 1.084972 3.498705 0.5882399 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26383_c0_g1_i2 797.3255993 1260.635839 334.0153594 0.264957848 -1.916165233 4.13E-70 7.05E-68 Down 41.46362 42.24577 38.66858 8.537441 7.854753 9.78047 EYU20379.1 hypothetical protein MIMGU_mgv1a005412mg [Erythranthe guttata] P49043|VPE_CITSI Vacuolar-processing enzyme OS=Citrus sinensis OX=2711 PE=2 SV=1 -- -- -- -- -- -- KOG1348 Asparaginyl peptidases [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG5206 "phosphatidylinositol glycan anchor biosynthesis, class K" Molecular Function: cysteine-type peptidase activity (GO:0008234); PF01650.17 Peptidase C13 family TRINITY_DN26393_c0_g5_i1 321.1269143 189.599941 452.6538875 2.387415761 1.255449829 9.90E-17 2.61E-15 Up 28.47248 32.92703 31.20203 65.17081 58.65458 54.61847 ABR92332.1 putative aldo/keto reductase 2 [Salvia miltiorrhiza] P49249|IN22_MAIZE IN2-2 protein OS=Zea mays OX=4577 GN=IN2-2 PE=2 SV=1 -- -- -- -- -- -- KOG1575 "Voltage-gated shaker-like K+ channel, subunit beta/KCNAB" [C] METABOLISM Energy production and conversion C COG0667 Aldo keto reductase Molecular Function: oxidoreductase activity (GO:0016491); PF00248.20 Aldo/keto reductase family TRINITY_DN26401_c0_g2_i1 40.88270345 72.59015112 9.175255774 0.126398081 -2.983953539 0.023382361 0.076867237 Down 19.74055 6.150952 5.717977 0.3015283 0.2976289 2.738283 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2640_c0_g1_i1 17.50558066 35.01116133 0 0 #NAME? 1.54E-09 2.15E-08 Down 3.697894 9.383381 8.115931 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26417_c1_g1_i6 94.13471649 53.35535362 134.9140794 2.528594981 1.338335971 6.28E-07 6.22E-06 Up 2.302076 3.923899 2.94199 6.128226 6.102594 6.402992 XP_011069999.1 uncharacterized protein LOC105155757 isoform X1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- G COG0800 Aldolase -- PF01081.18 KDPG and KHG aldolase TRINITY_DN26420_c1_g1_i1 9.631928324 19.26385665 0 0 #NAME? 1.38E-06 1.29E-05 Down 5.409218 3.28788 3.253936 0 1.22E-78 5.21E-65 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26420_c3_g1_i1 34.1631458 18.58094816 49.74534345 2.67722309 1.420737362 0.001402613 0.007046905 Up 1.488811 0.8245028 1.186438 2.740534 2.389722 2.34995 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26420_c3_g2_i1 113.3304989 152.6555508 74.00544703 0.484787134 -1.044576683 0.001715051 0.008412722 Down 9.432851 8.708157 10.20325 1.743906 5.894819 3.478479 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26420_c4_g1_i1 48.65215384 72.66716707 24.63714061 0.339040885 -1.560468837 0.009373657 0.036112435 Down 15.26123 6.121956 12.71069 3.482346 4.31618 1.496474 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26420_c4_g4_i1 46.30055979 21.96536404 70.63575555 3.21577896 1.685168245 0.041114393 0.121275302 Up 8.236667 3.731454 1.022209 16.38841 3.924976 13.2331 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26422_c0_g4_i4 397.5828266 259.5120732 535.6535801 2.064079615 1.045498619 1.50E-14 3.33E-13 Up 8.758671 8.199241 7.808834 13.04846 14.28766 13.92041 OAY33251.1 hypothetical protein MANES_13G080500 [Manihot esculenta] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26424_c0_g1_i5 234.3224563 318.8508501 149.7940624 0.469793517 -1.089901289 4.32E-10 6.42E-09 Down 11.82115 10.61572 10.92104 4.243971 4.077449 4.322949 XP_011074333.2 growth-regulating factor 6 [Sesamum indicum] Q8L8A8|GRF2_ARATH Growth-regulating factor 2 OS=Arabidopsis thaliana OX=3702 GN=GRF2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG4111S3M growth-regulating factor "Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: transcription, DNA-templated (GO:0006351);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: negative regulation of cell proliferation (GO:0008285);|Biological Process: root development (GO:0048364);" "PF08879.9,PF08880.10" WRC|QLQ TRINITY_DN26429_c0_g1_i9 334.3123848 550.848238 117.7765317 0.213809401 -2.225602808 1.19E-45 1.14E-43 Down 15.05905 14.28369 15.21469 2.932635 1.878865 2.883874 PIN25018.1 Hydroxymethylglutaryl-CoA lyase [Handroanthus impetiginosus] O81027|HMGCL_ARATH "Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HMGCL PE=1 SV=2" sind:105159928 K01640 "E4.1.3.4, HMGCL, hmgL" hydroxymethylglutaryl-CoA lyase ko00280|ko00072|ko00650|ko04146 "Valine, leucine and isoleucine degradation|Synthesis and degradation of ketone bodies|Butanoate metabolism|Peroxisome" KOG2368 Hydroxymethylglutaryl-CoA lyase [CE] METABOLISM|METABOLISM Energy production and conversion |Amino acid transport and metabolism E COG0119 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (By similarity) Molecular Function: hydroxymethylglutaryl-CoA lyase activity (GO:0004419);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial matrix (GO:0005759);|Biological Process: leucine catabolic process (GO:0006552);|Biological Process: lipid metabolic process (GO:0006629);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: ketone body biosynthetic process (GO:0046951); PF00682.18 HMGL-like TRINITY_DN26429_c0_g4_i1 239.6446423 454.6087023 24.68058222 0.054289727 -4.203176968 1.07E-44 9.94E-43 Down 66.48032 85.46993 65.01003 3.674759 1.830395 4.021653 XP_011075457.1 "hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1 [Sesamum indicum]" O81027|HMGCL_ARATH "Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HMGCL PE=1 SV=2" sind:105159928 K01640 "E4.1.3.4, HMGCL, hmgL" hydroxymethylglutaryl-CoA lyase ko00280|ko00072|ko00650|ko04146 "Valine, leucine and isoleucine degradation|Synthesis and degradation of ketone bodies|Butanoate metabolism|Peroxisome" KOG2368 Hydroxymethylglutaryl-CoA lyase [CE] METABOLISM|METABOLISM Energy production and conversion |Amino acid transport and metabolism E COG0119 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (By similarity) Molecular Function: hydroxymethylglutaryl-CoA lyase activity (GO:0004419);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial matrix (GO:0005759);|Biological Process: leucine catabolic process (GO:0006552);|Biological Process: lipid metabolic process (GO:0006629);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: ketone body biosynthetic process (GO:0046951); -- -- TRINITY_DN26433_c0_g2_i1 14.78824198 22.95640402 6.62007995 0.288376174 -1.793976125 0.013693107 0.04953548 Down 3.940551 3.614617 2.368806 1.225241 0.7358808 0.2521699 XP_011086813.1 squamosa promoter-binding-like protein 12 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26446_c0_g1_i4 100.3619739 134.9676261 65.75632179 0.487200699 -1.037411891 6.01E-05 0.000417898 Down 2.207842 2.376002 2.403098 0.9349317 0.9058936 0.9222424 PIN25052.1 Serine/threonine protein kinase [Handroanthus impetiginosus] O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana OX=3702 GN=At5g35370 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN26446_c0_g2_i1 6.536717974 13.07343595 0 0 #NAME? 0.000861463 0.00457415 Down 2.489464 3.120179 0.4634229 0 1.85E-18 2.37E-50 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26446_c0_g4_i1 8.522011532 17.04402306 0 0 #NAME? 0.001247738 0.006356026 Down 4.170662 0.5825552 6.159657 6.67E-88 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26451_c0_g3_i1 17.32867791 6.081124504 28.57623131 4.699168927 2.232405631 0.000665814 0.003639168 Up 0.6059877 0.1679948 0.4602421 1.652646 1.624816 1.539576 XP_022858907.1 potassium transporter 10-like isoform X2 [Olea europaea var. sylvestris] O64769|POT11_ARATH Potassium transporter 11 OS=Arabidopsis thaliana OX=3702 GN=POT11 PE=2 SV=1 bna:106441196 K03549 kup KUP system potassium uptake protein -- -- -- -- -- -- -- P COG3158 Transport of potassium into the cell (By similarity) Cellular Component: plasma membrane (GO:0005886);|Biological Process: potassium ion transport (GO:0006813);|Molecular Function: potassium ion transmembrane transporter activity (GO:0015079);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN26456_c0_g4_i1 135.4274076 197.962343 72.89247219 0.368213828 -1.441384286 2.35E-10 3.59E-09 Down 3.622829 3.381018 3.395844 1.303013 0.523347 1.276112 XP_011095588.1 probable LRR receptor-like serine/threonine-protein kinase At4g26540 [Sesamum indicum] C0LGR3|RGI3_ARATH LRR receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana OX=3702 GN=RGI3 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF13855.5,PF00069.24,PF07714.16,PF12799.6,PF00560.32,PF08263.11" Leucine rich repeat|Protein kinase domain|Protein tyrosine kinase|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine rich repeat N-terminal domain TRINITY_DN26460_c0_g1_i2 7520.829489 11545.78603 3495.872946 0.302783452 -1.723641737 1.82E-172 1.02E-169 Down 296.0134 289.9914 301.2158 71.3387 75.58254 69.82296 XP_011082857.1 "polyphenol oxidase I, chloroplastic-like [Sesamum indicum]" Q6UIL3|LAHY_LARTR "(+)-larreatricin hydroxylase, chloroplastic OS=Larrea tridentata OX=66636 PE=1 SV=1" sind:105165516 K00422 E1.10.3.1 polyphenol oxidase ko00950|ko00350 Isoquinoline alkaloid biosynthesis|Tyrosine metabolism -- -- -- -- -- S ENOG410XSH6 polyphenol oxidase Molecular Function: catechol oxidase activity (GO:0004097);|Cellular Component: chloroplast thylakoid lumen (GO:0009543);|Biological Process: pigment biosynthetic process (GO:0046148);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: (+)-3'-hydroxylarreatricin biosynthetic process (GO:1901708);|Biological Process: (+)-larreatricin metabolic process (GO:1901709); "PF00264.19,PF12143.7,PF12142.7" Common central domain of tyrosinase|Protein of unknown function (DUF_B2219)|Polyphenol oxidase middle domain TRINITY_DN26460_c0_g2_i1 37.28488936 73.41241369 1.15736504 0.01576525 -5.98710816 1.13E-09 1.60E-08 Down 11.22122 12.47924 22.91316 4.65E-54 3.32E-39 0.6889275 XP_020548830.1 alcohol dehydrogenase-like 1 isoform X1 [Sesamum indicum] -- -- sind:105160197 K00121 "frmA, ADH5, adhC" S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase ko00071|ko00350|ko00010 Fatty acid degradation|Tyrosine metabolism|Glycolysis / Gluconeogenesis -- -- -- -- -- C COG1062 alcohol dehydrogenase -- -- -- TRINITY_DN26460_c0_g6_i4 3215.214649 2119.773467 4310.65583 2.033545516 1.023997282 4.69E-15 1.09E-13 Up 87.5024 104.2152 91.14256 158.4966 166.8523 138.3384 PWA69488.1 Ribosomal protein S13 [Artemisia annua] P34788|RS18_ARATH 40S ribosomal protein S18 OS=Arabidopsis thaliana OX=3702 GN=RPS18A PE=1 SV=1 sind:105163279 K02964 "RP-S18e, RPS18" small subunit ribosomal protein S18e ko03010 Ribosome KOG3311 Ribosomal protein S18 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0099 "Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits" Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cell wall (GO:0005618);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Cellular Component: ribosome (GO:0005840);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translational initiation (GO:0006413);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF00416.21 Ribosomal protein S13/S18 TRINITY_DN26465_c0_g2_i2 14.36287602 3.974510486 24.75124155 6.227494339 2.638651805 0.001729778 0.0084758 Up 0.6935731 0.3435651 0.8147066 3.497545 1.287668 4.3491 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26465_c0_g3_i1 4.606992174 9.213984347 0 0 #NAME? 0.002863156 0.013138622 Down 0.9585281 3.26233 1.100962 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26474_c1_g2_i1 7.122460439 13.50990251 0.735018369 0.054405897 -4.200093149 0.003470024 0.01548448 Down 3.112025 1.027483 1.226036 0.2417627 0 1.30E-81 CAN82851.1 hypothetical protein VITISV_027998 [Vitis vinifera] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN26483_c2_g1_i1 153.8200634 307.6401269 0 0 #NAME? 8.54E-81 1.75E-78 Down 16.40737 21.77346 18.86559 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26483_c2_g2_i2 184.9222298 369.8444595 0 0 #NAME? 5.23E-107 1.45E-104 Down 16.07893 13.12886 13.39282 0 0 0 XP_011007986.1 PREDICTED: trichohyalin-like [Populus euphratica] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26484_c0_g3_i1 21.44344237 35.93057999 6.956304758 0.193604021 -2.368819179 0.002173115 0.010340063 Down 8.122474 3.909679 4.368831 1.886162 0.6231374 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26484_c0_g5_i2 8.372684801 14.0919574 2.653412205 0.188292664 -2.408951299 0.016861963 0.058724495 Down 2.720428 3.011997 1.506457 0 0.3528223 0.7650886 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26484_c0_g8_i1 30.00700646 48.13139815 11.88261477 0.246878654 -2.018125996 5.07E-05 0.00035851 Down 7.033985 4.883543 5.650261 1.621818 0.8581747 1.027975 PIN15956.1 Tub family protein [Handroanthus impetiginosus] Q93VI8|TLP7_ARATH Tubby-like F-box protein 7 OS=Arabidopsis thaliana OX=3702 GN=TULP7 PE=2 SV=1 -- -- -- -- -- -- KOG2502 Tub family proteins [R] POORLY CHARACTERIZED General function prediction only S ENOG410XQFT tubby like protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: cilium (GO:0005929);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Cellular Component: plastid (GO:0009536);|Biological Process: pollen development (GO:0009555);|Biological Process: response to fungus (GO:0009620);|Molecular Function: phosphatidylinositol binding (GO:0035091);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: protein localization to cilium (GO:0061512);" -- -- TRINITY_DN26487_c0_g1_i1 112.0506783 166.512522 57.58883455 0.345852876 -1.531769643 0.000433544 0.002487747 Down 20.5385 32.58531 29.06005 1.401297 12.39467 9.160936 XP_011085435.1 reticulon-like protein B8 [Sesamum indicum] Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana OX=3702 GN=RTNLB8 PE=2 SV=1 -- -- -- -- -- -- KOG1792 Reticulon [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U ENOG410XPKH Reticulon Cellular Component: mitochondrion (GO:0005739);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN26487_c2_g1_i3 297.3410302 422.3142345 172.3678259 0.408150642 -1.292826369 1.53E-16 3.96E-15 Down 17.17075 16.1894 18.93864 6.059832 5.495091 5.676768 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26487_c3_g2_i1 12.41766184 21.84322936 2.992094329 0.136980402 -2.8679586 0.003093623 0.014035864 Down 3.7198 5.934367 1.774758 0 0.6220665 0.6814191 -- -- -- -- tcc:TCM_005821 K16297 SCPL-II serine carboxypeptidase-like clade II -- -- -- -- -- -- -- E COG2939 carboxy-peptidase -- -- -- TRINITY_DN26493_c1_g2_i1 18.04858032 3.198507593 32.89865304 10.28562606 3.362557704 4.74E-06 4.06E-05 Up 0 0 1.711579 5.046719 2.863908 5.984899 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26493_c2_g5_i1 27.38406421 41.07188015 13.69624826 0.333470204 -1.584370233 0.001941538 0.009378763 Down 7.68937 7.987019 7.264123 1.724608 2.580205 1.803755 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26494_c0_g2_i1 18.8650489 31.50143947 6.228658337 0.19772615 -2.338424411 0.000620912 0.003417826 Down 7.158491 5.483904 3.534624 5.57E-81 2.068184 0.5230408 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2649_c0_g1_i1 8.07485945 15.42524843 0.724470471 0.046966535 -4.412223027 0.000300401 0.001793991 Down 1.482096 1.442803 2.53142 0 0.2521156 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26503_c0_g1_i1 9.84404923 19.32058928 0.367509184 0.019021634 -5.716214982 8.17E-06 6.71E-05 Down 1.637436 3.711028 2.096393 0.1435304 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26504_c0_g2_i1 6.596787063 13.19357413 0 0 #NAME? 0.001755462 0.008583122 Down 3.13142 2.661956 0.3530594 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26504_c0_g4_i2 39.40262273 57.65195518 21.15329029 0.366913667 -1.446487451 0.000473584 0.002691549 Down 1.824003 3.016781 3.002825 0.7899356 0.7889978 0.7181888 XP_012847744.1 PREDICTED: uncharacterized N-acetyltransferase ycf52 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26505_c0_g1_i6 12.13039021 21.66747965 2.593300769 0.119686314 -3.062669906 0.000423783 0.002438433 Down 2.248113 2.259428 1.499056 0.1631104 0.238383 0.1777175 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26505_c0_g4_i1 9.197279367 15.41792693 2.9766318 0.193063037 -2.372856116 0.011407793 0.042473255 Down 1.365546 1.099529 1.62695 0.4469276 0 0.147005 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26506_c0_g1_i1 12.54907528 19.04330257 6.054847991 0.317951572 -1.653121053 0.03221745 0.099982682 Down 3.168054 2.768282 1.909619 0 0.6505599 1.405338 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26522_c0_g2_i3 147.2782219 294.5564439 0 0 #NAME? 7.56E-90 1.72E-87 Down 9.485365 10.80119 9.249104 0 0 0 XP_012839839.1 PREDICTED: putative nuclease HARBI1 [Erythranthe guttata] Q94K49|ALP1_ARATH Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=ALP1 PE=1 SV=1 -- -- -- -- -- -- KOG4585 Predicted transposase [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG411206Y transposon protein Molecular Function: chromatin binding (GO:0003682);|Molecular Function: nuclease activity (GO:0004518);|Cellular Component: nucleus (GO:0005634);|Biological Process: negative regulation of chromatin silencing (GO:0031936);|Cellular Component: ESC/E(Z) complex (GO:0035098);|Cellular Component: PRC1 complex (GO:0035102);|Molecular Function: metal ion binding (GO:0046872); PF13359.5 DDE superfamily endonuclease TRINITY_DN26522_c0_g3_i1 94.11207872 188.2241574 0 0 #NAME? 1.21E-58 1.64E-56 Down 8.80978 8.361256 9.063848 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26522_c0_g4_i1 21.70804531 43.41609062 0 0 #NAME? 4.38E-14 9.39E-13 Down 3.132252 2.462588 1.851209 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26534_c1_g1_i1 12.58020384 23.32286176 1.837545922 0.078787326 -3.665892611 0.000895861 0.004737371 Down 2.928006 2.795023 6.901765 0.7279481 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2653_c0_g1_i1 8.269833275 16.53966655 0 0 #NAME? 0.005229923 0.022014269 Down 4.657618 5.527106 0 4.43E-84 0 7.77E-20 XP_012856095.1 PREDICTED: putative disease resistance protein RGA3 [Erythranthe guttata] Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Biological Process: defense response (GO:0006952);|Molecular Function: ADP binding (GO:0043531); PF00931.21 NB-ARC domain TRINITY_DN26547_c1_g1_i7 148.6532241 63.01824014 234.288208 3.71778405 1.894442973 7.83E-18 2.24E-16 Up 1.835283 1.228661 1.559898 4.856798 4.903718 4.106516 PIN01423.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9LPZ9|SD113_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana OX=3702 GN=SD113 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- T ENOG4110XTI serine threonine-protein kinase -- "PF00954.19,PF01453.23,PF08276.10,PF00069.24,PF07714.16" S-locus glycoprotein domain|D-mannose binding lectin|PAN-like domain|Protein kinase domain|Protein tyrosine kinase TRINITY_DN26558_c0_g1_i2 154.5302851 286.3718578 22.68871241 0.07922815 -3.65784308 1.03E-47 1.05E-45 Down 7.013725 6.784361 6.520573 0.4883924 0.3722295 0.4460445 XP_011076014.1 "plastidial pyruvate kinase 4, chloroplastic [Sesamum indicum]" Q9M3B6|PKP4_ARATH "Plastidial pyruvate kinase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PKP4 PE=2 SV=1" sind:105160374 K00873 "PK, pyk" pyruvate kinase ko00620|ko00230|ko00010 Pyruvate metabolism|Purine metabolism|Glycolysis / Gluconeogenesis KOG2323 Pyruvate kinase [G] METABOLISM Carbohydrate transport and metabolism G COG0469 Pyruvate kinase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: pyruvate kinase activity (GO:0004743);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: glycolytic process (GO:0006096);|Cellular Component: chloroplast stroma (GO:0009570);|Molecular Function: kinase activity (GO:0016301);|Molecular Function: potassium ion binding (GO:0030955);|Biological Process: cellular response to insulin stimulus (GO:0032869); PF00224.20 "Pyruvate kinase, barrel domain" TRINITY_DN2655_c0_g1_i1 7.956005899 2.132098988 13.77991281 6.463073659 2.692220434 0.007498601 0.029923869 Up 0.1067937 0.4159992 0.08094684 0.7591796 1.12672 1.235842 XP_012844854.1 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Erythranthe guttata] O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF01453.23 D-mannose binding lectin TRINITY_DN26560_c0_g1_i1 28.21138519 5.416379492 51.00639088 9.417063734 3.235277294 4.50E-06 3.87E-05 Up 0.6683224 0.382649 0.711668 2.40462 5.740274 5.585929 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26560_c0_g2_i1 151.8227461 286.8629371 16.78255504 0.058503741 -4.095327304 5.11E-46 4.92E-44 Down 9.091149 8.91508 6.901464 0.2881383 0.4087831 0.4887973 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26560_c0_g3_i1 18.77903769 8.903453475 28.65462191 3.218371611 1.686330917 0.005192924 0.021874758 Up 0.6089448 0.6788308 0.4289412 1.352177 1.425738 1.614561 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26562_c0_g1_i4 482.3058523 708.4525764 256.1591282 0.361575548 -1.46763098 7.59E-30 4.21E-28 Down 21.68033 20.73062 20.6138 6.079317 6.343185 5.955841 AGN03861.1 9-cis epoxycarotenoid dioxygenase [Scutellaria baicalensis] O24023|NCED1_SOLLC "9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=NCED1 PE=1 SV=2" sind:105176883 K09840 NCED 9-cis-epoxycarotenoid dioxygenase ko00906 Carotenoid biosynthesis KOG1285 "Beta, beta-carotene 15,15'-dioxygenase and related enzymes" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG3670 dioxygenase Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Molecular Function: carotenoid dioxygenase activity (GO:0010436);|Biological Process: carotene catabolic process (GO:0016121);|Molecular Function: 9-cis-epoxycarotenoid dioxygenase activity (GO:0045549);|Molecular Function: metal ion binding (GO:0046872); PF03055.14 Retinal pigment epithelial membrane protein TRINITY_DN26566_c1_g4_i2 21.68986442 43.37972885 0 0 #NAME? 4.09E-14 8.78E-13 Down 4.702175 6.907286 4.079111 0 0 0 XP_023917061.1 uncharacterized protein LOC112028598 [Quercus suber] P93295|M310_ARATH Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN26566_c2_g1_i1 8.745849833 17.49169967 0 0 #NAME? 0.000283054 0.001698884 Down 1.625535 5.203126 1.911129 0 0 0 RHN55891.1 putative RNA-directed DNA polymerase [Medicago truncatula] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN26567_c0_g2_i1 10.52464569 16.24602087 4.803270506 0.295658275 -1.757997438 0.036646438 0.11067073 Down 1.451683 4.206736 3.459154 0 1.534029 0.7934409 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26570_c0_g1_i4 281.728673 138.3917671 425.065579 3.071465796 1.618927317 2.38E-23 9.48E-22 Up 4.813723 4.483513 4.812737 10.98367 12.07448 11.97683 PIN19692.1 hypothetical protein CDL12_07620 [Handroanthus impetiginosus] Q8S8P5|WRK33_ARATH Probable WRKY transcription factor 33 OS=Arabidopsis thaliana OX=3702 GN=WRKY33 PE=1 SV=2 sind:105161503 K13424 WRKY33 WRKY transcription factor 33 ko04626 Plant-pathogen interaction -- -- -- -- -- K ENOG4112BTF WRKY transcription factor Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to heat (GO:0009408);|Biological Process: response to cold (GO:0009409);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to salt stress (GO:0009651);|Biological Process: camalexin biosynthetic process (GO:0010120);|Biological Process: response to chitin (GO:0010200);|Biological Process: positive regulation of autophagy (GO:0010508);|Biological Process: cellular response to heat (GO:0034605);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: defense response to fungus (GO:0050832);|Biological Process: cellular heat acclimation (GO:0070370); PF03106.14 WRKY DNA -binding domain TRINITY_DN26576_c0_g2_i1 32.34725241 10.78951342 53.9049914 4.996053975 2.320789063 8.41E-07 8.18E-06 Up 1.063659 1.475415 0.6120962 3.609914 4.446719 4.441331 PIN18827.1 Copper chaperone [Handroanthus impetiginosus] F4IC29|HIP28_ARATH Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX=3702 GN=HIPP28 PE=3 SV=1 -- -- -- -- -- -- KOG1603 Copper chaperone [P] METABOLISM Inorganic ion transport and metabolism S COG2608 heavy metal transport detoxification protein Biological Process: metal ion transport (GO:0030001);|Molecular Function: metal ion binding (GO:0046872); PF00403.25 Heavy-metal-associated domain TRINITY_DN26577_c0_g1_i1 416.6869733 274.9282305 558.4457162 2.031241809 1.022361995 1.42E-14 3.17E-13 Up 8.411554 6.096375 6.409586 11.44226 10.5882 12.28957 XP_011098867.1 chloride channel protein CLC-a [Sesamum indicum] P92942|CLCB_ARATH Chloride channel protein CLC-b OS=Arabidopsis thaliana OX=3702 GN=CLC-B PE=1 SV=1 sind:105177418 K05016 CLCN7 chloride channel 7 -- -- KOG0474 Cl- channel CLC-7 and related proteins (CLC superfamily) [P] METABOLISM Inorganic ion transport and metabolism P COG0038 chloride channel Molecular Function: voltage-gated chloride channel activity (GO:0005247);|Molecular Function: nitrate:proton symporter activity (GO:0009671);|Cellular Component: plant-type vacuole membrane (GO:0009705);|Biological Process: response to nitrate (GO:0010167);|Biological Process: nitrate transport (GO:0015706);|Cellular Component: chloride channel complex (GO:0034707);|Biological Process: regulation of ion transmembrane transport (GO:0034765);|Biological Process: chloride transmembrane transport (GO:1902476); "PF00654.19,PF00571.27" Voltage gated chloride channel|CBS domain TRINITY_DN26583_c0_g2_i1 3.212449772 6.424899543 0 0 #NAME? 0.015104583 0.053668073 Down 2.086203 1.385875 0.5479725 0 0 0 PIM99329.1 hypothetical protein CDL12_28176 [Handroanthus impetiginosus] Q9FQ20|SCC12_ARATH Sister chromatid cohesion 1 protein 2 OS=Arabidopsis thaliana OX=3702 GN=SYN2 PE=2 SV=2 -- -- -- -- -- -- KOG1213 "Sister chromatid cohesion complex Cohesin, subunit RAD21/SCC1" [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " S ENOG410XRB4 Doublestrandbreak repair protein rad21 Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: nuclear cohesin complex (GO:0000798);|Molecular Function: chromatin binding (GO:0003682);|Cellular Component: nucleus (GO:0005634);|Biological Process: double-strand break repair (GO:0006302);|Biological Process: sister chromatid cohesion (GO:0007062);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN26586_c0_g1_i2 24.8396021 42.58475672 7.094447476 0.166595938 -2.585574873 0.001696888 0.008331731 Down 6.95779 3.699336 10.7177 0 1.481569 1.47524 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26586_c1_g7_i1 20.30480137 38.77487344 1.834729289 0.04731748 -4.401482956 4.25E-09 5.63E-08 Down 4.891959 3.521144 4.056947 0 0.3786159 0.1307178 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2659_c0_g1_i1 14.11337874 28.22675748 0 0 #NAME? 9.95E-08 1.10E-06 Down 3.195234 1.184922 3.080427 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2660_c0_g1_i1 3.13055646 6.26111292 0 0 #NAME? 0.014868643 0.052998219 Down 1.684123 0.3293725 1.56644 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2660_c0_g2_i1 9.475883486 18.95176697 0 0 #NAME? 1.72E-06 1.59E-05 Down 3.219908 1.766607 1.812933 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26614_c0_g2_i1 7.06392365 11.90732967 2.220517635 0.186483258 -2.422881977 0.030347664 0.095090185 Down 1.984309 1.508043 1.187259 0 0.4171523 0.2225034 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26634_c1_g2_i3 28.4847422 56.96948439 0 0 #NAME? 1.53E-18 4.57E-17 Down 3.568394 4.193183 4.673238 0 0 0 OWM77525.1 hypothetical protein CDL15_Pgr016923 [Punica granatum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26634_c2_g1_i1 14.41292737 28.82585474 0 0 #NAME? 1.35E-09 1.89E-08 Down 3.055735 2.299845 2.176668 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26636_c0_g2_i1 30.51182469 41.75746855 19.26618083 0.461382874 -1.115963642 0.018483985 0.0635169 Down 4.121502 3.992201 4.063319 1.627467 1.629501 1.259528 PIN24962.1 Serine/threonine protein kinase [Handroanthus impetiginosus] O49840|PBL3_ARATH Probable serine/threonine-protein kinase PBL3 OS=Arabidopsis thaliana OX=3702 GN=PBL3 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN26643_c0_g3_i15 444.7627382 871.3329961 18.19248034 0.020878907 -5.58181002 2.55E-191 1.78E-188 Down 33.70999 33.48702 31.88521 0.5651146 0.5653318 0.5391791 PIN25284.1 Cyclopropane-fatty-acyl-phospholipid synthase [Handroanthus impetiginosus] -- -- sind:105171751 K00574 cfa cyclopropane-fatty-acyl-phospholipid synthase -- -- -- -- -- -- -- M COG2230 cyclopropane-fatty-acyl-phospholipid synthase -- -- -- TRINITY_DN26643_c0_g4_i2 12.47531953 24.95063905 0 0 #NAME? 2.57E-08 3.08E-07 Down 3.274591 2.081707 1.488977 1.22E-81 0 7.56E-54 XP_022862327.1 serine/threonine-protein kinase MHK isoform X1 [Olea europaea var. sylvestris] Q84SN3|CDKF3_ORYSJ Cyclin-dependent kinase F-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-3 PE=2 SV=1 spen:107023747 K08829 MAK male germ cell-associated kinase -- -- KOG0661 MAPK related serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XPBB Male germ cell-associated kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: cyclin-dependent protein serine/threonine kinase activity (GO:0004693);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: RNA polymerase II CTD heptapeptide repeat kinase activity (GO:0008353);|Biological Process: regulation of gene expression (GO:0010468);|Biological Process: intracellular signal transduction (GO:0035556); -- -- TRINITY_DN26643_c0_g6_i1 27.81563267 37.96182538 17.66943997 0.465452854 -1.103293051 0.026082814 0.084071374 Down 4.120596 3.487971 2.990605 1.274222 0.63634 2.153099 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26647_c0_g1_i2 147.9064804 212.2051261 83.60783475 0.393995359 -1.343749461 2.64E-09 3.58E-08 Down 13.66226 14.27658 17.07765 3.027022 5.078523 6.304202 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26648_c0_g1_i1 9.90479372 18.3395507 1.470036737 0.080156639 -3.64103418 0.000367385 0.002144915 Down 3.625792 2.907806 2.400454 0.606462 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26652_c0_g1_i4 513.7076702 320.1967528 707.2185876 2.208700061 1.143197516 2.99E-20 9.92E-19 Up 7.717285 8.610166 8.556524 14.26399 14.51731 15.59225 XP_011096345.1 MACPF domain-containing protein NSL1 [Sesamum indicum] Q9SGN6|NSL1_ARATH MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana OX=3702 GN=NSL1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZJIW MAC/Perforin domain Cellular Component: plasma membrane (GO:0005886);|Biological Process: immune response (GO:0006955);|Biological Process: cell death (GO:0008219);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: response to salt stress (GO:0009651);|Biological Process: regulation of salicylic acid metabolic process (GO:0010337);|Biological Process: defense response by callose deposition (GO:0052542); PF01823.18 MAC/Perforin domain TRINITY_DN26657_c1_g1_i1 53.78797649 74.30487612 33.27107686 0.447764381 -1.159188327 0.001283077 0.006510473 Down 7.101098 7.398751 5.050879 1.998952 1.939296 3.121247 XP_020551199.1 zinc finger CCCH domain-containing protein ZFN-like [Sesamum indicum] Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum sativum OX=3888 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG5063 zinc finger Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN26657_c1_g3_i1 34.61448715 50.33839324 18.89058107 0.375271832 -1.413992089 0.001767147 0.008631883 Down 2.961652 4.082631 2.902175 0.6829462 1.353296 0.9609303 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26662_c2_g3_i8 290.43727 186.3641435 394.5103964 2.116879293 1.081939008 7.10E-08 8.00E-07 Up 9.626914 10.10384 14.68983 18.88823 17.49517 22.49651 XP_012841431.1 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Erythranthe guttata] Q6JN47|EIX1_SOLLC Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN26662_c2_g8_i1 27.32435867 38.72542748 15.92328986 0.411184353 -1.282142727 0.011940569 0.044152676 Down 2.21575 2.239463 1.815049 0.2554242 0.3796353 1.504701 XP_008370540.1 PREDICTED: uncharacterized protein LOC103434004 [Malus domestica] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111DM2 NA -- -- -- TRINITY_DN26669_c0_g1_i1 129.3177365 78.87300169 179.7624712 2.279138202 1.188488409 1.88E-07 2.00E-06 Up 2.725145 3.03293 2.501312 4.533489 4.998244 5.662325 XP_011077634.1 uncharacterized protein LOC105161595 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZJS8 avr9 Cf-9 rapidly elicited protein -- "PF05003.11,PF11961.7" Protein of unknown function (DUF668)|Domain of unknown function (DUF3475) TRINITY_DN26670_c0_g2_i3 35.0582322 69.0297587 1.086705707 0.015742569 -5.989185243 4.98E-19 1.53E-17 Down 3.665476 4.067079 4.375625 3.05E-107 0.1409209 0 XP_010526485.1 PREDICTED: tyrosine decarboxylase 1-like [Tarenaya hassleriana] Q7XHL3|TDC2_ORYSJ Tryptophan decarboxylase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TDC2 PE=1 SV=1 thj:104804035 K01592 E4.1.1.25 tyrosine decarboxylase ko00950|ko00350 Isoquinoline alkaloid biosynthesis|Tyrosine metabolism KOG0628 Aromatic-L-amino-acid/L-histidine decarboxylase [E] METABOLISM Amino acid transport and metabolism E COG0076 decarboxylase Biological Process: serotonin biosynthetic process from tryptophan (GO:0006587);|Molecular Function: pyridoxal phosphate binding (GO:0030170);|Molecular Function: L-tryptophan decarboxylase activity (GO:0036469); -- -- TRINITY_DN26678_c0_g3_i1 19.55391252 2.492075819 36.61574922 14.69287128 3.877044449 0.02116179 0.070924183 Up 0.08439356 0.3766142 0.5131451 1.040629 3.68865 8.692781 XP_011097989.1 uncharacterized protein LOC105176754 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YNU9 Cotton fibre expressed protein -- -- -- TRINITY_DN26684_c0_g1_i4 432.6015148 242.6955228 622.5075067 2.564973179 1.35894374 1.52E-24 6.46E-23 Up 6.648336 6.042625 5.930212 12.53005 12.81324 13.22614 XP_011095036.1 wall-associated receptor kinase 2 [Sesamum indicum] Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16,PF13947.5,PF07645.14,PF00008.26" Protein kinase domain|Protein tyrosine kinase|Wall-associated receptor kinase galacturonan-binding|Calcium-binding EGF domain|EGF-like domain TRINITY_DN26686_c0_g2_i1 14.70205431 29.40410862 0 0 #NAME? 1.37E-06 1.29E-05 Down 6.856688 7.660099 2.255863 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26687_c0_g1_i2 34.62843604 62.38334117 6.873530907 0.110182154 -3.182037522 4.96E-06 4.23E-05 Down 8.908293 7.1678 4.044886 0 0.3086931 1.51134 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26687_c0_g4_i1 67.31158423 125.3967825 9.226385932 0.073577533 -3.764590881 5.21E-23 2.03E-21 Down 12.13564 10.18078 12.07471 0.7704072 0.7671503 0.4700077 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26695_c0_g2_i1 16.21245244 4.494753451 27.93015144 6.213945156 2.635509508 0.000404609 0.002341758 Up 2.01E-20 0.1346558 1.230333 2.141592 2.113553 2.609677 KDO82426.1 hypothetical protein CISIN_1g016265mg [Citrus sinensis] K4BW79|ENOX_SOLLC 2-methylene-furan-3-one reductase OS=Solanum lycopersicum OX=4081 GN=EO PE=1 SV=1 gmx:100810816 K18980 "EO, FaQR" 2-methylene-furan-3-one reductase -- -- KOG1198 Zinc-binding oxidoreductase [CR] METABOLISM|POORLY CHARACTERIZED Energy production and conversion |General function prediction only C COG0604 alcohol dehydrogenase Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: furaneol oxidoreductase activity (GO:0102978); -- -- TRINITY_DN26702_c0_g1_i3 214.2136352 416.0256391 12.4016312 0.029809776 -5.068070645 9.25E-92 2.15E-89 Down 12.41839 11.98552 10.41788 0.2116602 0.1665533 0.4378604 XP_022881515.1 serine/arginine-rich splicing factor RSZ22A-like [Olea europaea var. sylvestris] Q6K9C3|RZP23_ORYSJ Serine/arginine-rich splicing factor RSZ23 OS=Oryza sativa subsp. japonica OX=39947 GN=RSZ23 PE=2 SV=1 aip:107631461 K12896 SFRS7 "splicing factor, arginine/serine-rich 7" ko03040 Spliceosome -- -- -- -- -- -- -- -- "Biological Process: regulation of alternative mRNA splicing, via spliceosome (GO:0000381);|Biological Process: mRNA splicing, via spliceosome (GO:0000398);|Molecular Function: RNA binding (GO:0003723);|Cellular Component: nucleus (GO:0005634);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: mRNA cis splicing, via spliceosome (GO:0045292);" -- -- TRINITY_DN26702_c0_g3_i4 85.88562075 170.6845358 1.086705707 0.00636675 -7.295227251 5.09E-49 5.39E-47 Down 7.462925 7.899123 7.959327 2.80E-78 0.09981373 5.85E-84 XP_020205811.1 serine/arginine-rich splicing factor RSZ22-like isoform X2 [Cajanus cajan] Q6K9C3|RZP23_ORYSJ Serine/arginine-rich splicing factor RSZ23 OS=Oryza sativa subsp. japonica OX=39947 GN=RSZ23 PE=2 SV=1 jcu:105637497 K12896 SFRS7 "splicing factor, arginine/serine-rich 7" ko03040 Spliceosome -- -- -- -- -- S ENOG4111N8Y serine arginine-rich splicing factor "Biological Process: regulation of alternative mRNA splicing, via spliceosome (GO:0000381);|Biological Process: mRNA splicing, via spliceosome (GO:0000398);|Molecular Function: RNA binding (GO:0003723);|Cellular Component: nucleus (GO:0005634);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: mRNA cis splicing, via spliceosome (GO:0045292);" -- -- TRINITY_DN26702_c0_g4_i1 27.50317665 48.74077733 6.265575979 0.128548955 -2.959610215 5.99E-07 5.95E-06 Down 5.044679 5.715588 9.2351 0.8470441 0.8507894 0.4438939 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26703_c0_g1_i8 35.51463583 63.91618571 7.113085955 0.11128771 -3.167633813 1.22E-10 1.92E-09 Down 2.672942 2.623048 3.423298 0.3270659 0.1288712 0.3418627 -- -- Q9M2K8|AGL18_ARATH Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana OX=3702 GN=AGL18 PE=1 SV=1 fve:101299900 K09264 K09264 "MADS-box transcription factor, plant" -- -- KOG0014 MADS box transcription factor [K] INFORMATION STORAGE AND PROCESSING Transcription -- -- -- "Molecular Function: RNA polymerase II regulatory region sequence-specific DNA binding (GO:0000977);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: pollen development (GO:0009555);|Biological Process: flower development (GO:0009908);|Biological Process: negative regulation of flower development (GO:0009910);|Biological Process: positive regulation of transcription by RNA polymerase II (GO:0045944);|Molecular Function: protein dimerization activity (GO:0046983);|Biological Process: negative regulation of short-day photoperiodism, flowering (GO:0048577);" -- -- TRINITY_DN26706_c1_g1_i1 20.44538655 32.73035641 8.160416704 0.249322574 -2.003914583 0.000696088 0.003786854 Down 4.705372 6.350948 9.532221 0.8908646 1.820079 1.420594 XP_022850735.1 uncharacterized protein LOC111372597 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26708_c1_g4_i1 41.56580224 62.94358973 20.18801476 0.320731862 -1.640560413 0.000448799 0.002564425 Down 10.59575 8.438093 14.98202 3.019592 4.476257 1.162136 PIN24925.1 Serine/threonine protein kinase [Handroanthus impetiginosus] O64782|SD129_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 OS=Arabidopsis thaliana OX=3702 GN=SD129 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN26709_c0_g4_i1 11.28186162 18.78950433 3.77421892 0.200868466 -2.315676996 0.005987254 0.024713962 Down 1.450558 2.662331 1.510623 0.1940767 0.1455435 0.5623864 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26709_c1_g1_i1 11.47612171 19.69212631 3.26011712 0.165554347 -2.594623199 0.00311123 0.014096024 Down 1.362982 1.771904 3.126031 0 0.782668 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26711_c1_g6_i1 52.03989746 99.91978766 4.160007267 0.041633468 -4.586112457 1.41E-12 2.70E-11 Down 3.571911 5.200268 2.806947 0.07521812 0.07489741 0.2445567 XP_021717769.1 uncharacterized protein LOC110685538 [Chenopodium quinoa] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03078.14 ATHILA ORF-1 family TRINITY_DN26711_c1_g8_i1 29.11246605 40.64161398 17.58331811 0.432643204 -1.208750353 0.014190268 0.050992625 Down 5.12841 7.344499 3.967767 2.4396 0.8240532 2.398037 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26712_c0_g1_i5 178.1431607 286.9229803 69.36334097 0.241748991 -2.048418227 2.91E-20 9.67E-19 Down 25.7627 22.06524 25.78545 3.208125 7.491296 3.539671 XP_011099929.1 protein S-acyltransferase 10 [Sesamum indicum] Q7XA86|ZDH11_ARATH Protein S-acyltransferase 10 OS=Arabidopsis thaliana OX=3702 GN=PAT10 PE=1 SV=1 sind:105178209 K18932 ZDHHC palmitoyltransferase -- -- -- -- -- -- -- S COG5273 "Zinc finger, DHHC-type containing" Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: Golgi apparatus (GO:0005794);|Biological Process: protein targeting to membrane (GO:0006612);|Biological Process: response to salt stress (GO:0009651);|Cellular Component: plant-type vacuole membrane (GO:0009705);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: peptidyl-L-cysteine S-palmitoylation (GO:0018230);|Molecular Function: protein-cysteine S-palmitoyltransferase activity (GO:0019706);|Biological Process: plant organ development (GO:0099402); -- -- TRINITY_DN26718_c0_g1_i13 180.8785241 346.1343155 15.62273268 0.045134885 -4.469613244 1.86E-69 3.10E-67 Down 11.31564 13.63938 10.94724 0.4506454 0.3765098 0.4643427 AUB30939.1 cytochrome c biogenesis factor C (mitochondrion) [Chionanthus parkinsonii] P93286|CCMFC_ARATH Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein OS=Arabidopsis thaliana OX=3702 GN=CCMFC PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YDS3 cytochrome c biogenesis Cellular Component: mitochondrial inner membrane (GO:0005743);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: cytochrome complex assembly (GO:0017004); -- -- TRINITY_DN26718_c0_g2_i1 11.82811626 23.65623252 0 0 #NAME? 2.02E-05 0.00015479 Down 4.968371 1.594139 6.859384 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26720_c0_g2_i1 8.053517908 16.10703582 0 0 #NAME? 1.38E-05 0.00010873 Down 3.815678 2.332116 1.923727 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26720_c0_g3_i1 14.14342488 25.37314603 2.913703731 0.114834153 -3.122376316 9.39E-05 0.000625795 Down 3.9786 2.363648 3.685668 0.3135413 0.6173875 4.86E-16 PIN19860.1 Protein-disulfide reductase [Handroanthus impetiginosus] Q9SR96|DNJ63_ARATH DnaJ protein ERDJ3A OS=Arabidopsis thaliana OX=3702 GN=ERDJ3A PE=1 SV=1 -- -- -- -- -- -- KOG0714 Molecular chaperone (DnaJ superfamily) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG2214 DNAj domain protein Cellular Component: endoplasmic reticulum lumen (GO:0005788);|Biological Process: response to heat (GO:0009408);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: pollen tube growth (GO:0009860);|Molecular Function: oxidoreductase activity (GO:0016491);|Biological Process: cellular response to heat (GO:0034605); -- -- TRINITY_DN26730_c0_g3_i3 543.4622745 726.2021906 360.7223584 0.496724415 -1.009482435 5.21E-17 1.40E-15 Down 22.28501 20.74344 22.39596 8.624745 8.815276 8.807384 XP_020554053.1 uncharacterized protein LOC105174809 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41122MS "- C2H2 zinc finger protein, expressed" -- -- -- TRINITY_DN26736_c0_g2_i1 29.58579642 42.15757334 17.0140195 0.403581567 -1.309067812 0.005999251 0.024751284 Down 2.67568 3.430096 3.971439 0.9146188 1.477444 0.904197 XP_012847922.1 PREDICTED: eukaryotic translation initiation factor 5B [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YQ1A NA -- -- -- TRINITY_DN26747_c0_g2_i4 35.06023162 53.32454366 16.79591957 0.314975402 -1.66668893 0.000235235 0.001437147 Down 4.367153 3.66671 3.1178 1.123073 0.598345 1.106321 PIN10808.1 hypothetical protein CDL12_16597 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YS41 NA -- -- -- TRINITY_DN26751_c0_g5_i1 6.604887959 13.20977592 0 0 #NAME? 0.000112896 0.000740136 Down 3.362831 1.953605 1.548923 0 0 0 PNX55994.1 "cysteine-rich receptor-like protein kinase, partial [Trifolium pratense]" -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN26751_c0_g6_i1 15.95205911 30.44462938 1.45948884 0.047939123 -4.382652666 1.33E-06 1.25E-05 Down 3.694647 1.489642 2.825717 0.1261154 0.1234038 2.15E-80 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26751_c1_g1_i1 10.53551374 21.07102747 0 0 #NAME? 7.87E-06 6.49E-05 Down 0.8960264 3.235674 3.096775 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26753_c1_g4_i1 6.797618859 13.59523772 0 0 #NAME? 8.06E-05 0.000545414 Down 2.970955 2.275442 1.956972 3.35E-111 2.07E-112 0 CDP21092.1 unnamed protein product [Coffea canephora] Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); PF08263.11 Leucine rich repeat N-terminal domain TRINITY_DN26754_c0_g1_i1 110.9805894 152.1898331 69.77134577 0.458449453 -1.125165418 5.27E-06 4.48E-05 Down 4.93495 3.741912 4.366375 1.619255 1.265352 1.943947 XP_011079135.1 metacaspase-9 [Sesamum indicum] Q9FYE1|MCA9_ARATH Metacaspase-9 OS=Arabidopsis thaliana OX=3702 GN=AMC9 PE=1 SV=1 -- -- -- -- -- -- KOG1546 Metacaspase involved in regulation of apoptosis [DO] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning |Posttranslational modification, protein turnover, chaperones " O ENOG410Y41C Metacaspase Molecular Function: cysteine-type peptidase activity (GO:0008234);|Cellular Component: apoplast (GO:0048046); PF00656.21 Caspase domain TRINITY_DN26754_c1_g1_i1 120.6070542 75.92281017 165.2912983 2.177096684 1.122405479 2.35E-06 2.12E-05 Up 12.20692 10.08503 12.28596 20.9574 19.78595 19.99377 EYU27714.1 hypothetical protein MIMGU_mgv1a021776mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YRP8 Protein of unknown function (DUF506) -- -- -- TRINITY_DN26754_c3_g1_i7 168.910724 337.0864296 0.735018369 0.002180504 -8.841122529 1.38E-98 3.38E-96 Down 16.9113 16.93156 16.35477 0.09774916 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26754_c3_g2_i1 19.19102766 38.38205532 0 0 #NAME? 2.19E-12 4.11E-11 Down 6.85387 10.00414 4.958678 2.50E-58 0 7.28E-37 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26754_c3_g3_i1 20.42412165 40.84824329 0 0 #NAME? 2.02E-13 4.14E-12 Down 8.142714 6.855283 7.831293 0 2.97E-53 1.17E-70 XP_009617385.1 PREDICTED: uncharacterized protein LOC104109739 [Nicotiana tomentosiformis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YRP8 Protein of unknown function (DUF506) -- -- -- TRINITY_DN26763_c0_g3_i1 6.820819699 0.651223126 12.99041627 19.94771954 4.318151919 0.000623327 0.003430489 Up 0.2368018 0 0 2.10337 0.7865256 1.037557 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26766_c0_g2_i1 21.69413905 37.95474958 5.433528533 0.143158066 -2.804319139 0.002412763 0.011317819 Down 2.84363 8.932886 7.94279 0 2.267551 1.15E-74 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26769_c0_g1_i1 10.72960447 17.30974957 4.149459369 0.239718048 -2.060589566 0.013479955 0.048896883 Down 1.69861 4.46086 4.101486 0 0.6261833 1.278712 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26773_c1_g1_i2 162.0511779 231.1561749 92.94618091 0.402092572 -1.31440041 2.47E-10 3.76E-09 Down 6.146724 6.357302 6.614145 1.986118 2.038708 2.169716 XP_011097784.1 uncharacterized protein At1g04910-like [Sesamum indicum] Q8GUM0|OFT11_ARATH O-fucosyltransferase 11 OS=Arabidopsis thaliana OX=3702 GN=OFUT11 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XT6Z DUF246 domain-containing protein -- PF10250.8 GDP-fucose protein O-fucosyltransferase TRINITY_DN26785_c0_g1_i2 740.9504711 478.6983883 1003.202554 2.09568818 1.067424072 9.12E-24 3.73E-22 Up 27.26405 26.84284 26.12427 45.29889 46.32462 44.10979 KZV39736.1 WRKY DNA-binding protein 7 isoform 1 [Dorcoceras hygrometricum] Q9STX0|WRKY7_ARATH Probable WRKY transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=WRKY7 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YD1E WRKY transcription factor Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: nucleus (GO:0005634);|Molecular Function: sequence-specific DNA binding (GO:0043565); "PF03106.14,PF10533.8" WRKY DNA -binding domain|Plant zinc cluster domain TRINITY_DN26789_c0_g3_i1 11.26419002 22.52838005 0 0 #NAME? 6.92E-05 0.000474875 Down 1.57586 5.775116 2.769569 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26794_c0_g1_i3 601.7570977 376.0705426 827.4436528 2.200235219 1.137657765 8.15E-23 3.14E-21 Up 26.88522 29.48662 27.97111 46.99084 52.74129 50.05084 XP_020553978.1 putative receptor-like protein kinase At4g00960 [Sesamum indicum] Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN26794_c1_g1_i1 10.91903005 21.11358964 0.724470471 0.034312994 -4.865101182 9.04E-06 7.37E-05 Down 3.490953 1.659255 2.912179 1.00E-96 0.2184778 5.04E-30 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26794_c1_g2_i1 15.0359914 22.65431574 7.41766707 0.327428432 -1.610748494 0.019613964 0.066741879 Down 1.839757 1.597164 2.061056 0.3987851 0.5343574 0.4431161 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26794_c1_g3_i1 285.6949511 384.6507491 186.7391532 0.48547716 -1.042524672 6.73E-11 1.09E-09 Down 25.84594 30.45272 25.48016 9.218733 11.13117 11.77409 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN267_c0_g1_i1 11.88528659 23.77057318 0 0 #NAME? 4.29E-08 4.98E-07 Down 3.021322 2.880882 3.656468 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26800_c0_g1_i1 104.5811415 55.94520025 153.2170827 2.738699334 1.453490889 1.34E-08 1.67E-07 Up 1.468658 1.364273 1.433406 2.852474 3.550945 3.016109 XP_011070857.1 phosphate transporter PHO1 homolog 1 [Sesamum indicum] Q93ZF5|PHO11_ARATH Phosphate transporter PHO1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PHO1-H1 PE=2 SV=1 -- -- -- -- -- -- KOG1162 Predicted small molecule transporter [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " T COG5409 Xenotropic and polytropic retrovirus receptor 1 Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: phosphate ion transport (GO:0006817);|Molecular Function: phosphate ion transmembrane transporter activity (GO:0015114);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: cellular response to phosphate starvation (GO:0016036); "PF03124.13,PF03105.18" EXS family|SPX domain TRINITY_DN26803_c0_g1_i11 240.9794966 413.426579 68.53241418 0.165766832 -2.592772727 1.56E-43 1.40E-41 Down 17.92654 15.26706 15.08783 1.822314 2.140264 2.508273 XP_011097453.1 8-hydroxygeraniol dehydrogenase-like isoform X1 [Sesamum indicum] Q6V4H0|10HGO_CATRO 8-hydroxygeraniol dehydrogenase OS=Catharanthus roseus OX=4058 GN=10HGO PE=1 SV=1 sind:105176370 K00083 E1.1.1.195 cinnamyl-alcohol dehydrogenase ko00940 Phenylpropanoid biosynthesis KOG0023 "Alcohol dehydrogenase, class V" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " C COG1064 alcohol dehydrogenase Molecular Function: zinc ion binding (GO:0008270);|Molecular Function: 8-hydroxygeraniol dehydrogenase activity (GO:0102311); "PF08240.11,PF00107.25" Alcohol dehydrogenase GroES-like domain|Zinc-binding dehydrogenase TRINITY_DN26803_c1_g1_i1 12.57031443 25.14062887 0 0 #NAME? 1.69E-08 2.07E-07 Down 5.31022 2.969874 4.685511 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26810_c0_g1_i5 55.3005434 90.01548579 20.58560102 0.228689551 -2.128537646 4.26E-09 5.64E-08 Down 7.355224 5.64532 8.469243 1.009386 1.101059 1.863184 XP_021887079.1 uncharacterized protein LOC110806496 isoform X1 [Carica papaya] Q8W034|RNP1_ARATH Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41125AS expressed protein Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA binding (GO:0003729);|Cellular Component: nucleus (GO:0005634);|Cellular Component: spliceosomal complex (GO:0005681);|Cellular Component: cytosol (GO:0005829);|Biological Process: mRNA processing (GO:0006397);|Biological Process: RNA splicing (GO:0008380);|Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);|Biological Process: mRNA transport (GO:0051028);|Biological Process: regulation of response to salt stress (GO:1901000);|Cellular Component: ribonucleoprotein complex (GO:1990904);|Biological Process: regulation of response to water deprivation (GO:2000070); -- -- TRINITY_DN26810_c0_g4_i1 30.11066911 0 60.22133822 Inf Inf 1.95E-17 5.38E-16 Up 0 5.77E-26 0 5.169443 7.810947 4.481192 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26811_c0_g4_i1 14.64779999 21.86211105 7.433488917 0.340016977 -1.556321312 0.025909037 0.083618124 Down 1.351015 1.764859 1.706415 0.6052909 0.2941236 0.4023439 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26815_c0_g1_i2 39.40680851 25.60918367 53.20443336 2.077552882 1.0548852 0.00814559 0.032121688 Up 0.909452 0.5879117 0.4869188 1.196804 0.9821849 1.17121 XP_011101302.1 cell division cycle protein 48 homolog isoform X2 [Sesamum indicum] P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max OX=3847 GN=CDC48 PE=2 SV=1 sind:105179388 K13525 "VCP, CDC48" transitional endoplasmic reticulum ATPase ko04141 Protein processing in endoplasmic reticulum KOG0730 AAA+-type ATPase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0464 Aaa atpase "Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: macroautophagy (GO:0016236);|Molecular Function: ATPase activity (GO:0016887);|Biological Process: ubiquitin-dependent ERAD pathway (GO:0030433);|Biological Process: retrograde protein transport, ER to cytosol (GO:0030970);|Molecular Function: polyubiquitin modification-dependent protein binding (GO:0031593);|Cellular Component: VCP-NPL4-UFD1 AAA ATPase complex (GO:0034098);|Biological Process: mitotic spindle disassembly (GO:0051228);|Biological Process: ER-associated misfolded protein catabolic process (GO:0071712);|Biological Process: autophagosome maturation (GO:0097352);" "PF00004.28,PF02359.17,PF05496.11,PF02933.16,PF13191.5,PF07724.13,PF07728.13,PF13671.5,PF13401.5,PF06068.12,PF13238.5,PF13173.5,PF01078.20,PF00910.21,PF01695.16,PF01637.17,PF05729.11,PF00005.26" "ATPase family associated with various cellular activities (AAA)|Cell division protein 48 (CDC48), N-terminal domain|Holliday junction DNA helicase ruvB N-terminus|Cell division protein 48 (CDC48), domain 2|AAA ATPase domain|AAA domain (Cdc48 subfamily)|AAA domain (dynein-related subfamily)|AAA domain|AAA domain|TIP49 C-terminus|AAA domain|AAA domain|Magnesium chelatase, subunit ChlI|RNA helicase|IstB-like ATP binding protein|ATPase domain predominantly from Archaea|NACHT domain|ABC transporter" TRINITY_DN26824_c0_g2_i1 20.67327484 39.80339629 1.543153387 0.03876939 -4.688938161 9.17E-10 1.31E-08 Down 4.449659 2.909413 5.837925 0 0 0.438724 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26825_c1_g1_i7 1254.823439 281.9745608 2227.672317 7.900259907 2.981900117 5.68E-205 4.23E-202 Up 5.899768 5.995198 7.213754 39.51636 39.90328 42.48646 XP_011099789.1 prolyl endopeptidase [Sesamum indicum] H2E7Q7|POPA_GALM3 Prolyl oligopeptidase A OS=Galerina marginata (strain CBS 339.88) OX=685588 GN=POPA PE=2 SV=2 -- -- -- -- -- -- KOG2237 Predicted serine protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " E COG1505 prolyl oligopeptidase Molecular Function: serine-type endopeptidase activity (GO:0004252);|Molecular Function: serine-type exopeptidase activity (GO:0070008); "PF00326.20,PF02897.14" "Prolyl oligopeptidase family|Prolyl oligopeptidase, N-terminal beta-propeller domain" TRINITY_DN26825_c1_g3_i1 53.71442466 9.529629335 97.89921998 10.27314039 3.36080536 7.73E-18 2.21E-16 Up 3.093074 0 0.216989 9.980901 7.744134 9.966588 PIN08629.1 putative serine protease [Handroanthus impetiginosus] H2E7Q7|POPA_GALM3 Prolyl oligopeptidase A OS=Galerina marginata (strain CBS 339.88) OX=685588 GN=POPA PE=2 SV=2 -- -- -- -- -- -- KOG2237 Predicted serine protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " E COG1505 prolyl oligopeptidase Molecular Function: serine-type endopeptidase activity (GO:0004252);|Molecular Function: serine-type exopeptidase activity (GO:0070008); -- -- TRINITY_DN26826_c0_g1_i3 619.829251 1239.658502 0 0 #NAME? 0 0 Down 19.7286 19.37069 19.01864 0 0 0 XP_012833553.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Erythranthe guttata] Q1MX30|XA21_ORYSI Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: positive regulation of defense response (GO:0031349);|Biological Process: protein autophosphorylation (GO:0046777);|Biological Process: positive regulation of defense response to bacterium (GO:1900426); "PF00069.24,PF07714.16,PF13855.5,PF12799.6,PF08263.11,PF00560.32" Protein kinase domain|Protein tyrosine kinase|Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine rich repeat N-terminal domain|Leucine Rich Repeat TRINITY_DN26828_c1_g3_i1 21.35020493 34.48515567 8.215254191 0.238225811 -2.069598359 0.000490792 0.002779951 Down 2.335152 3.078102 2.310322 0.1358924 0.676904 0.6879066 EEF36685.1 "3'-5' exonuclease, putative [Ricinus communis]" A9LLI7|RP6L2_ARATH Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1 rcu:8282368 K12591 "RRP6, EXOSC10" exosome complex exonuclease RRP6 ko03018 RNA degradation KOG2206 "Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)" [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0349 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides (By similarity) Molecular Function: nucleotide binding (GO:0000166);|Cellular Component: nuclear exosome (RNase complex) (GO:0000176);|Molecular Function: nucleic acid binding (GO:0003676);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: rRNA processing (GO:0006364);|Molecular Function: 3'-5' exonuclease activity (GO:0008408);|Biological Process: polyadenylation-dependent RNA catabolic process (GO:0043633);|Biological Process: RNA-directed DNA methylation (GO:0080188);|Biological Process: positive regulation of histone H3-K27 trimethylation (GO:1902466); -- -- TRINITY_DN26832_c2_g2_i1 17.5529237 30.9641193 4.141728104 0.133758951 -2.902292661 0.00451228 0.019420302 Down 4.032033 8.460918 2.777267 0.3796457 0.3231356 0.9744405 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26833_c0_g1_i1 69.26872364 44.43881596 94.09863132 2.117487365 1.082353361 0.00042747 0.002457466 Up 1.430671 1.849597 1.40973 2.791388 2.426352 2.808638 AMZ03396.1 cytochrome P450 CYP71AT86 [Plectranthus barbatus] Q9LIP3|C71BY_ARATH Cytochrome P450 71B37 OS=Arabidopsis thaliana OX=3702 GN=CYP71B37 PE=3 SV=2 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN26846_c0_g1_i3 1430.731853 865.4392164 1996.02449 2.306371669 1.20562502 1.28E-45 1.21E-43 Up 30.84948 29.65717 29.18197 56.42139 57.35209 53.06753 XP_011081934.1 cytochrome P450 71D95-like [Sesamum indicum] Q6WKY9|C7D95_MENGR Cytochrome P450 71D95 OS=Mentha gracilis OX=241069 GN=CYP71D95 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN26850_c2_g2_i7 97.51724053 132.4890722 62.54540889 0.472079756 -1.082897476 3.62E-05 0.000264009 Down 5.386672 5.655517 5.740963 1.77585 2.162268 2.430188 -- -- Q9SAK4|SSDH_ARATH "Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALDH5F1 PE=1 SV=2" -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: succinate-semialdehyde dehydrogenase (NAD+) activity (GO:0004777);|Molecular Function: copper ion binding (GO:0005507);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial matrix (GO:0005759);|Biological Process: glutamate decarboxylation to succinate (GO:0006540);|Molecular Function: succinate-semialdehyde dehydrogenase [NAD(P)+] activity (GO:0009013);|Biological Process: response to heat (GO:0009408);|Biological Process: response to light stimulus (GO:0009416);|Biological Process: gamma-aminobutyric acid catabolic process (GO:0009450);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Molecular Function: NAD binding (GO:0051287);|Biological Process: reactive oxygen species metabolic process (GO:0072593); -- -- TRINITY_DN26852_c1_g1_i1 13.16094713 19.63115497 6.690739284 0.340822498 -1.552907521 0.036361977 0.110024659 Down 1.411648 0.8420588 1.313921 0.5116618 0.1473746 0.3142256 XP_011076050.1 probably inactive receptor-like protein kinase At5g41680 [Sesamum indicum] Q9SUQ3|Y4374_ARATH Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana OX=3702 GN=At4g23740 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDXU Leucine rich repeat N-terminal domain -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN26852_c2_g2_i1 17.46222529 5.482430122 29.44202045 5.370250016 2.424989255 0.000260624 0.001578242 Up 0.4184955 0.3050631 0.3959709 1.702118 1.390011 1.928972 XP_011001938.1 PREDICTED: probable inactive receptor kinase At4g23740 [Populus euphratica] Q9FL63|Y5410_ARATH Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At5g24100 OS=Arabidopsis thaliana OX=3702 GN=At5g24100 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDXU Leucine rich repeat N-terminal domain -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN26852_c2_g3_i1 28.41166278 12.88992704 43.93339852 3.408351216 1.769074007 0.000341372 0.002012977 Up 0.4892872 0.7545889 0.4917045 1.475517 1.484462 1.76993 XP_011076050.1 probably inactive receptor-like protein kinase At5g41680 [Sesamum indicum] Q9SUQ3|Y4374_ARATH Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana OX=3702 GN=At4g23740 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDXU Leucine rich repeat N-terminal domain -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN26852_c3_g1_i1 7.41619716 2.207029917 12.6253644 5.720522548 2.516146938 0.019437312 0.066250029 Up 0.4301856 0 0.6614633 2.177875 1.461067 1.588527 XP_012830021.1 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Erythranthe guttata] Q0JEU6|LERK3_ORYSJ G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK3 PE=3 SV=2 -- -- -- -- -- -- -- -- -- -- -- T ENOG410YBN4 G-type lectin S-receptor-like serine threonine-protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: carbohydrate binding (GO:0030246); -- -- TRINITY_DN26857_c0_g2_i1 8.52011103 17.04022206 0 0 #NAME? 0.000184368 0.001155461 Down 5.001849 1.216949 2.872568 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26869_c1_g1_i1 14.18745686 22.05450026 6.320413466 0.286581577 -1.802982226 0.013616441 0.04931709 Down 5.290447 4.058878 3.771043 0.6355981 1.268475 1.222397 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26872_c0_g1_i2 468.969258 293.8171181 644.1213979 2.192252794 1.132414168 1.19E-18 3.55E-17 Up 8.151607 7.662524 8.466895 13.57774 15.29714 14.08076 XP_020552940.1 calmodulin-binding protein 60 C-like [Sesamum indicum] C0SV51|CB60C_ARATH Calmodulin-binding protein 60 C OS=Arabidopsis thaliana OX=3702 GN=CBP60C PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y99W Calmodulin binding protein-like Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: nucleus (GO:0005634);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: regulation of salicylic acid biosynthetic process (GO:0080142); PF07887.10 Calmodulin binding protein-like TRINITY_DN26882_c0_g1_i1 69.41951586 95.0051196 43.83391212 0.461384737 -1.115957816 0.000356451 0.002089454 Down 2.287597 2.032325 2.117678 0.7409779 0.8557585 0.8070618 XP_011098069.1 uncharacterized protein LOC105176840 isoform X2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YV8C NA -- -- -- TRINITY_DN26882_c0_g2_i2 18.11332404 30.31557608 5.911072008 0.194984651 -2.358567537 0.002060014 0.00988271 Down 2.085188 4.722553 2.374403 0.3635143 0.7107553 0.3735406 PIN08340.1 hypothetical protein CDL12_19084 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YV8C NA -- -- -- TRINITY_DN26889_c0_g1_i1 112.3984652 172.8124309 51.98449956 0.300814584 -1.73305358 7.93E-12 1.42E-10 Down 6.38553 6.005824 6.264792 1.853906 1.274194 1.399633 PON81528.1 "Zinc knuckle CX2CX4HX4C, partial [Trema orientale]" -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- PF14111.5 Domain of unknown function (DUF4283) TRINITY_DN26889_c0_g2_i1 82.72323129 112.6626372 52.78382537 0.468512247 -1.093841333 0.001376335 0.006926383 Down 8.755323 5.551525 6.160175 1.70273 3.168222 2.890088 XP_019414619.1 PREDICTED: uncharacterized protein LOC109326388 [Lupinus angustifolius] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111SG9 Reverse transcriptase (RNA-dependent DNA polymerase) -- "PF14111.5,PF14392.5" Domain of unknown function (DUF4283)|Zinc knuckle TRINITY_DN26889_c0_g3_i3 81.01530377 114.8655169 47.1650906 0.410611399 -1.284154416 0.003735901 0.016515752 Down 7.011389 9.220249 11.31134 2.527109 1.180447 5.495948 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2688_c0_g1_i1 14.64578623 29.29157246 0 0 #NAME? 1.57E-08 1.93E-07 Down 1.935379 4.768453 5.002539 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26894_c0_g2_i2 69.58900766 93.14186472 46.0361506 0.494258417 -1.016662561 0.001184097 0.00605972 Down 3.131433 2.938459 2.7155 1.054716 1.291956 1.156875 XP_011101155.1 uncharacterized protein LOC105179248 isoform X2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YW1D NA -- "PF14309.5,PF14383.5" Domain of unknown function (DUF4378)|DUF761-associated sequence motif TRINITY_DN26898_c2_g1_i1 39.2600369 68.51683723 10.00323657 0.145996765 -2.775991694 1.20E-09 1.69E-08 Down 8.833905 9.726536 9.678717 1.30684 1.085991 0.8961895 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26898_c2_g2_i1 48.40338352 4.508275338 92.29849171 20.47312659 4.355659538 4.04E-20 1.33E-18 Up 0.05992774 8.95E-59 0.5246143 2.812961 3.600081 2.831323 XP_021808903.1 uncharacterized protein LOC110752531 [Prunus avium] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG41106RX NA -- "PF14223.5,PF14244.5" gag-polypeptide of LTR copia-type|gag-polypeptide of LTR copia-type TRINITY_DN26898_c3_g1_i1 16.96784215 28.79373168 5.141952631 0.17857889 -2.48536655 0.000284124 0.001704858 Down 3.289637 4.467346 5.022224 4.24E-26 1.42497 0.3817474 XP_018828236.1 PREDICTED: uncharacterized protein LOC108996672 [Juglans regia] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only K COG0571 "Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)" Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN2689_c0_g1_i1 10.63267029 16.45925345 4.806087139 0.291999097 -1.775964189 0.035592494 0.108236758 Down 1.061357 1.479423 1.316592 0.3612657 0.3614781 0.2366764 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26901_c1_g2_i1 8.238833569 15.70609044 0.771576693 0.049125955 -4.347370734 0.00287456 0.013181625 Down 4.841748 0.6805517 4.031279 0.006326426 1.63E-06 0.3237137 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26902_c0_g5_i1 57.03109712 0 114.0621942 Inf Inf 9.72E-40 7.73E-38 Up 5.43E-46 7.48E-49 7.13E-41 5.396125 7.414289 6.871678 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26902_c0_g6_i1 28.93323888 3.302443979 54.56403377 16.52231926 4.046344309 0.001722561 0.008444069 Up 0.7478826 0.3523783 0.2802729 7.032178 10.39364 1.864887 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26904_c0_g2_i1 54.09363209 105.9850257 2.202238473 0.02077877 -5.588745933 2.92E-27 1.45E-25 Down 3.185439 3.507938 3.095408 0.04010111 0.1183481 0.04274456 XP_021682122.1 uncharacterized protein LOC110666060 [Hevea brasiliensis] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN26908_c0_g2_i1 15.53919288 6.121690165 24.95669559 4.076765552 2.027424992 0.00447235 0.019264887 Up 2.126842 0 1.218024 5.192167 2.055239 3.749881 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26926_c1_g1_i7 448.0531381 190.6146963 705.4915799 3.701139491 1.88796951 7.23E-45 6.75E-43 Up 7.170416 6.618937 6.927227 21.88395 20.11012 19.91185 XP_011081934.1 cytochrome P450 71D95-like [Sesamum indicum] Q6WKY9|C7D95_MENGR Cytochrome P450 71D95 OS=Mentha gracilis OX=241069 GN=CYP71D95 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN26936_c1_g2_i1 18.36163445 26.69683854 10.02643037 0.375566206 -1.412860841 0.02591416 0.083628711 Down 3.044702 3.387768 2.077199 0.1968473 1.362736 1.01601 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26938_c0_g2_i1 23.57694003 47.15388007 0 0 #NAME? 1.86E-08 2.27E-07 Down 12.52274 5.586331 6.069744 0 8.02E-60 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26938_c0_g6_i1 4.122454428 8.244908856 0 0 #NAME? 0.004123331 0.01796431 Down 1.409218 1.355389 0.528406 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26952_c0_g1_i2 124.7383574 169.7810544 79.69566037 0.469402553 -1.091102407 0.036702414 0.110795549 Down 19.90547 9.48647 11.75177 7.335997 4.095896 4.155765 RLW38295.1 putative sulfate transporter 3.3 [Quercus suber] Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3 OS=Arabidopsis thaliana OX=3702 GN=SULTR3;3 PE=2 SV=2 rcu:8258199 K17471 SULTR3 sulfate transporter 3 -- -- KOG0236 Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [P] METABOLISM Inorganic ion transport and metabolism P COG0659 sulfate transporter Molecular Function: secondary active sulfate transmembrane transporter activity (GO:0008271);|Molecular Function: sulfate transmembrane transporter activity (GO:0015116);|Molecular Function: symporter activity (GO:0015293);|Molecular Function: anion:anion antiporter activity (GO:0015301);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN2695_c0_g1_i2 27.72327508 3.263437123 52.18311303 15.99023087 3.999118864 1.15E-11 2.02E-10 Up 0.2447558 0 0.1225353 1.689259 1.235054 1.808584 ACL90898.1 blw-PA [synthetic construct] P24487|ATPA_SCHPO "ATP synthase subunit alpha, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=atp1 PE=3 SV=1" gsl:Gasu_04200 K02132 "ATPeF1A, ATP5A1, ATP1" F-type H+-transporting ATPase subunit alpha ko00190 Oxidative phosphorylation KOG1353 "F0F1-type ATP synthase, alpha subunit" [C] METABOLISM Energy production and conversion C COG0056 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (By similarity) "Cellular Component: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) (GO:0000275);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrial proton-transporting ATP synthase, catalytic core (GO:0005754);|Biological Process: ATP biosynthetic process (GO:0006754);|Biological Process: response to oxidative stress (GO:0006979);|Biological Process: ATP synthesis coupled proton transport (GO:0015986);|Biological Process: electron transport chain (GO:0022900);|Biological Process: mitochondrial ATP synthesis coupled proton transport (GO:0042776);|Molecular Function: ADP binding (GO:0043531);|Biological Process: ATP metabolic process (GO:0046034);|Molecular Function: proton-transporting ATP synthase activity, rotational mechanism (GO:0046933);" "PF00006.24,PF00306.26,PF02874.22" "ATP synthase alpha/beta family, nucleotide-binding domain|ATP synthase alpha/beta chain, C terminal domain|ATP synthase alpha/beta family, beta-barrel domain" TRINITY_DN26965_c0_g1_i4 86.33945516 51.63931552 121.0395948 2.343942664 1.22893728 9.19E-06 7.49E-05 Up 1.838988 1.429807 1.537637 2.849491 3.250052 3.010846 XP_011100548.1 aspartyl protease family protein 2-like [Sesamum indicum] Q9LNJ3|APF2_ARATH Aspartyl protease family protein 2 OS=Arabidopsis thaliana OX=3702 GN=APF2 PE=2 SV=1 -- -- -- -- -- -- KOG1339 Aspartyl protease [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XNV7 aspartic Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Biological Process: proteolysis (GO:0006508);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: membrane (GO:0016020);|Biological Process: protein catabolic process (GO:0030163);|Biological Process: response to karrikin (GO:0080167); "PF14543.5,PF14541.5,PF00026.22" Xylanase inhibitor N-terminal|Xylanase inhibitor C-terminal|Eukaryotic aspartyl protease TRINITY_DN26970_c0_g1_i1 10.82215119 3.509476168 18.13482622 5.167388336 2.369435308 0.004934233 0.020965692 Up 1.251642 0 0.6468281 2.331084 3.251896 2.29262 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26977_c0_g1_i5 85.06994323 132.7741877 37.36569874 0.281422913 -1.829188297 1.15E-06 1.09E-05 Down 5.913724 3.509295 5.545539 0.9725967 0.9603201 1.49633 XP_022850378.1 "peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic-like [Olea europaea var. sylvestris]" Q9LDY5|FK172_ARATH "Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP17-2 PE=1 SV=1" -- -- -- -- -- -- KOG0552 FKBP-type peptidyl-prolyl cis-trans isomerase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0545 Peptidyl-prolyl cis-trans isomerase Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: chloroplast thylakoid lumen (GO:0009543); -- -- TRINITY_DN26977_c0_g2_i1 23.23618745 31.63422412 14.83815077 0.469053729 -1.092174907 0.045082439 0.130470332 Down 2.389863 4.307305 3.125638 1.52215 1.04079 1.096145 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26977_c0_g3_i3 56.1408125 112.281625 0 0 #NAME? 1.31E-35 8.94E-34 Down 6.231618 6.85844 7.003879 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26977_c0_g4_i1 20.86402079 41.36580635 0.362235236 0.008756876 -6.835368007 1.78E-12 3.38E-11 Down 3.283211 3.232669 3.428287 0 0.07382188 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26985_c0_g2_i1 420.0949187 638.6040408 201.5857965 0.315666334 -1.663527689 4.83E-13 9.57E-12 Down 53.3191 45.83952 38.54901 10.73591 9.735668 14.70083 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN26985_c0_g4_i1 10.30390237 4.34180881 16.26599592 3.746363931 1.905491053 0.03856396 0.115206246 Up 0.2385053 0 1.668129 1.802776 2.709523 1.647182 XP_012847400.1 "PREDICTED: putative disease resistance protein RGA3, partial [Erythranthe guttata]" Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Biological Process: defense response (GO:0006952);|Molecular Function: ADP binding (GO:0043531); PF00931.21 NB-ARC domain TRINITY_DN26991_c0_g1_i1 33.48228895 47.02666609 19.93791181 0.423970344 -1.237964739 0.006230082 0.025537485 Down 3.412231 4.036021 4.011576 0.6618918 2.16407 1.098424 ERM95198.1 hypothetical protein AMTR_s00009p00265680 [Amborella trichopoda] Q10LF7|NUG2_ORYSJ Nuclear/nucleolar GTPase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=NUG2 PE=1 SV=1 atr:18423140 K14537 "NUG2, GNL2" nuclear GTP-binding protein ko03008 Ribosome biogenesis in eukaryotes KOG2423 Nucleolar GTPase [R] POORLY CHARACTERIZED General function prediction only S COG1161 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (By similarity) Molecular Function: GTP binding (GO:0005525);|Cellular Component: nucleolus (GO:0005730);|Molecular Function: hydrolase activity (GO:0016787); -- -- TRINITY_DN26992_c0_g1_i1 13.26928446 26.53856891 0 0 #NAME? 0.000613973 0.00338229 Down 8.409012 3.201514 1.887003 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27006_c2_g4_i1 7.45028786 2.658542347 12.24203337 4.604791564 2.203135854 0.041411932 0.121978577 Up 0 0.6486179 1.040738 1.729514 2.333138 1.877477 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27006_c2_g6_i1 10.77401538 5.011195412 16.53683534 3.299978146 1.72245647 0.040094837 0.118893711 Up 0.4656305 0.4490588 0.8978338 1.98544 2.251656 0.7183705 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27007_c0_g1_i2 29.59882664 41.21554162 17.98211167 0.43629444 -1.196626005 0.010776945 0.040473061 Down 5.127277 4.378206 5.976809 2.069889 0.8851104 2.452978 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27007_c1_g1_i2 33.15657879 55.18384035 11.12931724 0.201677106 -2.309880771 1.21E-06 1.14E-05 Down 6.626105 7.353461 9.385802 1.726329 0.9992228 1.012465 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27007_c1_g2_i6 47.41188709 76.21913576 18.60463843 0.244094062 -2.034490897 2.84E-07 2.95E-06 Down 5.772979 4.190255 4.275515 1.216603 0.6417309 0.9265933 PIN22029.1 hypothetical protein CDL12_05274 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27007_c1_g3_i2 17.10314481 32.32445411 1.881835511 0.058217086 -4.102413571 2.11E-07 2.23E-06 Down 3.498836 6.712249 4.413632 6.80E-42 0.222045 0.4605722 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27007_c1_g4_i1 17.52972568 35.05945136 0 0 #NAME? 1.27E-05 0.000100936 Down 2.306453 9.091466 4.995803 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27016_c1_g1_i1 20.41910354 40.83820707 0 0 #NAME? 2.51E-08 3.01E-07 Down 2.589793 4.893941 2.050359 1.70E-55 1.66E-78 8.82E-58 XP_011078049.1 "threonine synthase 1, chloroplastic [Sesamum indicum]" Q9SSP5|THRC2_ARATH "Threonine synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TS2 PE=1 SV=1" sind:105161896 K01733 thrC threonine synthase ko00260|ko00750 "Glycine, serine and threonine metabolism|Vitamin B6 metabolism" -- -- -- -- -- E COG0498 threonine synthase Molecular Function: threonine synthase activity (GO:0004795);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: threonine biosynthetic process (GO:0009088);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: pyridoxal phosphate binding (GO:0030170); -- -- TRINITY_DN27016_c1_g2_i5 39.3410106 73.3646489 5.317372307 0.072478672 -3.786299673 2.52E-14 5.48E-13 Down 2.274669 3.052397 2.586955 0.06719991 0.06690683 0.342119 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27025_c0_g6_i1 103.9949663 38.20409824 169.7858344 4.444178562 2.151916784 8.47E-07 8.23E-06 Up 6.939374 2.042193 2.679224 15.67401 9.725871 16.61119 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27026_c0_g1_i1 35.87093755 2.352653064 69.38922204 29.49403084 4.882351099 5.40E-18 1.56E-16 Up 0.2000114 0.06389976 0.1014061 2.639964 2.78951 2.503393 XP_012852156.1 PREDICTED: uncharacterized protein LOC105971805 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG0596 Alpha beta hydrolase -- -- -- TRINITY_DN27027_c0_g1_i7 27.29543918 53.81930166 0.771576693 0.014336431 -6.124170296 2.71E-15 6.41E-14 Down 6.921329 5.527143 6.074745 0 0 0.1925892 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27027_c0_g2_i1 21.19624494 42.39248988 0 0 #NAME? 8.04E-14 1.70E-12 Down 9.297843 9.712592 7.25768 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27027_c0_g3_i2 1249750.018 2295.869616 2497204.167 1087.694244 10.08705735 0 0 Up 25.39806 25.83662 24.21165 22597.96 22303.04 21301.35 PHT73970.1 hypothetical protein T459_21247 [Capsicum annuum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF00680.19,PF00910.21,PF00548.19" RNA dependent RNA polymerase|RNA helicase|3C cysteine protease (picornain 3C) TRINITY_DN27027_c0_g4_i1 20.72134948 41.44269897 0 0 #NAME? 1.56E-13 3.23E-12 Down 4.058727 4.179553 3.248603 0 0 0 XP_022856832.1 F-box protein At5g51370-like [Olea europaea var. sylvestris] Q9FGN4|FB289_ARATH F-box protein At5g51370 OS=Arabidopsis thaliana OX=3702 GN=At5g51370 PE=2 SV=1 spen:107012789 K10268 FBXL2_20 F-box and leucine-rich repeat protein 2/20 -- -- KOG1947 "Leucine rich repeat proteins, some proteins contain F-box" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XQ54 F-box and leucine-rich repeat protein Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);|Biological Process: protein ubiquitination (GO:0016567);|Cellular Component: SCF ubiquitin ligase complex (GO:0019005);|Biological Process: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146); -- -- TRINITY_DN27031_c1_g1_i1 40.99409011 20.12943346 61.85874676 3.073049567 1.619671037 0.007069056 0.028487718 Up 1.55989 0.7723066 1.146995 1.966097 2.290429 4.391424 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27031_c2_g1_i1 88.32448353 162.8244054 13.82456172 0.084904727 -3.55801131 1.15E-27 5.81E-26 Down 16.10123 14.97471 15.39395 1.09132 0.7039902 1.372662 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27031_c3_g3_i2 79.95366017 109.4122146 50.49510571 0.461512509 -1.115558343 0.001466753 0.007328598 Down 4.902663 7.192428 4.722447 1.273784 2.768667 2.246809 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27035_c0_g2_i1 7.703215187 12.46389958 2.942530791 0.236084283 -2.082626098 0.046860645 0.134552803 Down 1.479908 2.415115 1.203661 0.5147186 0.3483273 0.1849489 PIN20827.1 "Mitochondrial Fe/S cluster exporter, ABC superfamily [Handroanthus impetiginosus]" Q9LVM1|AB25B_ARATH "ABC transporter B family member 25, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ABCB25 PE=1 SV=1" sind:105163836 K05663 ABC.ATM mitochondrial ABC transporter ATM ko02010 ABC transporters KOG0057 "Mitochondrial Fe/S cluster exporter, ABC superfamily" [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " V COG5265 iron ion homeostasis "Molecular Function: transporter activity (GO:0005215);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Biological Process: Mo-molybdopterin cofactor biosynthetic process (GO:0006777);|Biological Process: ion transport (GO:0006811);|Biological Process: cellular iron ion homeostasis (GO:0006879);|Cellular Component: chloroplast (GO:0009507);|Biological Process: pollen development (GO:0009555);|Biological Process: chloroplast organization (GO:0009658);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: response to lead ion (GO:0010288);|Biological Process: regulation of chlorophyll biosynthetic process (GO:0010380);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: response to cadmium ion (GO:0046686);|Biological Process: root development (GO:0048364);|Biological Process: regulation of catalytic activity (GO:0050790);|Biological Process: chromosome organization (GO:0051276);" -- -- TRINITY_DN27046_c0_g1_i1 62.36553421 100.5361203 24.19494816 0.240659259 -2.054936168 1.72E-09 2.39E-08 Down 7.780344 8.59631 9.942238 1.215748 1.884295 1.981496 PIN14154.1 hypothetical protein CDL12_13211 [Handroanthus impetiginosus] Q8GX29|SKI25_ARATH F-box/kelch-repeat protein SKIP25 OS=Arabidopsis thaliana OX=3702 GN=SKIP25 PE=1 SV=1 -- -- -- -- -- -- KOG1072 FOG: Kelch repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG4111R43 F-box kelch-repeat protein Cellular Component: nucleus (GO:0005634);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: response to karrikin (GO:0080167); -- -- TRINITY_DN27046_c0_g2_i2 352.5564933 581.0078214 124.1051651 0.213603261 -2.226994425 1.23E-47 1.25E-45 Down 9.619345 8.688654 9.528143 1.53505 1.633037 1.635485 XP_020549562.1 uncharacterized protein LOC110011996 [Sesamum indicum] Q8GX29|SKI25_ARATH F-box/kelch-repeat protein SKIP25 OS=Arabidopsis thaliana OX=3702 GN=SKIP25 PE=1 SV=1 -- -- -- -- -- -- KOG1072 FOG: Kelch repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG4111R43 F-box kelch-repeat protein Cellular Component: nucleus (GO:0005634);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: response to karrikin (GO:0080167); PF03108.14 MuDR family transposase TRINITY_DN27056_c0_g2_i1 10.92376754 18.37543995 3.47209512 0.188953033 -2.403900415 0.036324541 0.109939985 Down 1.437659 4.094345 1.643177 0 0 1.105119 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27062_c0_g1_i11 1329.895191 804.0388755 1855.751506 2.30803704 1.206666377 1.95E-43 1.73E-41 Up 21.15393 21.43637 21.0709 38.75379 39.47485 40.32584 KZV51847.1 hypothetical protein F511_06890 [Dorcoceras hygrometricum] H2DH21|C7A29_PANGI Cytochrome P450 CYP72A219 OS=Panax ginseng OX=4054 PE=2 SV=1 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN27064_c4_g1_i1 105.6336519 204.8839622 6.383341535 0.031155887 -5.004351408 4.11E-47 4.09E-45 Down 4.612689 4.354361 4.143423 0.1319111 0.03239252 0.1528248 XP_023929660.1 uncharacterized protein LOC112040975 [Quercus suber] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- "PF13650.5,PF13975.5,PF09668.9" Aspartyl protease|gag-polyprotein putative aspartyl protease|Aspartyl protease TRINITY_DN27066_c0_g2_i1 23.90326949 32.57205195 15.23448702 0.467716527 -1.096293687 0.041275349 0.121644222 Down 3.597987 4.954629 3.897868 2.162063 1.082923 1.438806 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27070_c1_g2_i1 6.571083241 13.14216648 0 0 #NAME? 0.000116215 0.000759154 Down 1.963572 2.081597 1.171084 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27071_c0_g1_i3 31.78533847 46.28054406 17.29013288 0.373593985 -1.420456868 0.005054085 0.021383173 Down 5.375373 3.582232 2.817079 1.434879 1.559408 0.552594 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27072_c1_g1_i1 6.074565001 12.14913 0 0 #NAME? 0.00405868 0.017718374 Down 2.286335 3.904464 0.4485324 0 0 1.94E-48 XP_022896772.1 pentatricopeptide repeat-containing protein At5g27270 isoform X2 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27074_c1_g1_i1 221.7674494 319.1841861 124.3507127 0.389589203 -1.359974399 6.66E-14 1.41E-12 Down 17.26899 16.54619 15.81737 6.207608 4.601837 4.766294 XP_011075086.1 uncharacterized protein LOC105159651 [Sesamum indicum] Q9C996|GLIP6_ARATH GDSL esterase/lipase 6 OS=Arabidopsis thaliana OX=3702 GN=GLIP6 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41124MX NA Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: lipase activity (GO:0016298); -- -- TRINITY_DN27074_c2_g3_i4 21.03170644 36.51175947 5.551653406 0.152051106 -2.717371785 1.65E-05 0.0001285 Down 2.324094 5.112986 4.004526 0.7854348 0.2294283 0.2724495 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27074_c2_g6_i1 42.44769853 84.89539706 0 0 #NAME? 4.33E-27 2.13E-25 Down 9.38826 9.969416 9.184705 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27076_c0_g4_i1 28.46812438 50.9752539 5.960994864 0.116938993 -3.096172021 1.56E-08 1.93E-07 Down 7.777963 11.22306 12.41685 1.651033 0.3955437 0.8938572 XP_012855653.1 PREDICTED: putative late blight resistance protein homolog R1A-10 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27078_c0_g1_i1 99.41172219 39.61493046 159.2085139 4.018901765 2.006801314 8.50E-14 1.79E-12 Up 0.8839098 1.240642 0.9596603 3.185204 3.224008 3.58881 XP_020273363.1 uncharacterized protein LOC109848329 [Asparagus officinalis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03078.14 ATHILA ORF-1 family TRINITY_DN27086_c3_g4_i8 54.92633468 94.68146972 15.17119963 0.160234095 -2.641746933 6.42E-12 1.16E-10 Down 6.871351 6.705691 5.638824 0.4138102 1.320745 0.7866837 GAU15866.1 hypothetical protein TSUD_40870 [Trifolium subterraneum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27086_c3_g6_i2 55.41937495 30.12562109 80.71312882 2.679218748 1.421812377 0.00012128 0.000789398 Up 1.390423 1.046447 0.610181 1.852051 1.860049 2.916412 XP_020552903.1 "LOW QUALITY PROTEIN: protein Rf1, mitochondrial-like [Sesamum indicum]" P0C7Q7|PPR38_ARATH "Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1" -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- "PF13041.5,PF12854.6,PF01535.19,PF13812.5,PF17177.3,PF10037.8,PF14559.5,PF11848.7" PPR repeat family|PPR repeat|PPR repeat|Pentatricopeptide repeat domain|Pentacotripeptide-repeat region of PRORP|Mitochondrial 28S ribosomal protein S27|Tetratricopeptide repeat|Domain of unknown function (DUF3368) TRINITY_DN27086_c3_g8_i1 25.69399161 0 51.38798323 Inf Inf 2.38E-18 7.01E-17 Up 6.83E-77 3.79E-29 5.91E-13 3.221664 2.398973 3.245538 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27086_c3_g9_i1 64.95264474 0.325611563 129.5796779 397.9578513 8.636471829 2.56E-43 2.25E-41 Up 0.08287557 5.64E-25 9.96E-27 7.215738 6.880834 8.442522 XP_011077415.1 probable membrane-associated kinase regulator 4 [Sesamum indicum] Q9ZUS8|MAKR3_ARATH Probable membrane-associated kinase regulator 3 OS=Arabidopsis thaliana OX=3702 GN=MAKR3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: plasma membrane (GO:0005886); -- -- TRINITY_DN27087_c1_g2_i1 158.1480935 286.8436187 29.45256835 0.102678137 -3.283799072 1.01E-42 8.81E-41 Down 13.36825 15.50447 16.46961 1.368483 0.9845132 1.450235 AFK38162.1 unknown [Lotus japonicus] A7VLV1|SGRW_PEA "Protein STAY-GREEN, chloroplastic OS=Pisum sativum OX=3888 GN=SGR PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG4111UAI Senescence-inducible chloroplast stay-green protein -- PF12638.6 Staygreen protein TRINITY_DN27088_c0_g1_i1 19.58667818 33.98675482 5.186601537 0.152606554 -2.712111171 0.038311383 0.114563149 Down 1.721208 1.997625 6.660094 0.357976 0.5311291 0.3852515 XP_024982564.1 dynamin-related protein 1E-like [Cynara cardunculus var. scolymus] Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E OS=Arabidopsis thaliana OX=3702 GN=DRP1E PE=1 SV=1 -- -- -- -- -- -- KOG0446 "Vacuolar sorting protein VPS1, dynamin, and related proteins" [UR] CELLULAR PROCESSES AND SIGNALING|POORLY CHARACTERIZED "Intracellular trafficking, secretion, and vesicular transport |General function prediction only " S COG0699 Dynamin family Biological Process: mitochondrial fission (GO:0000266);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: microtubule (GO:0005874);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: cell cycle (GO:0007049);|Molecular Function: microtubule binding (GO:0008017);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: phragmoplast (GO:0009524);|Cellular Component: membrane (GO:0016020);|Biological Process: vesicle-mediated transport (GO:0016192);|Biological Process: response to cadmium ion (GO:0046686);|Biological Process: defense response to fungus (GO:0050832);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN27091_c0_g10_i1 20.85024511 41.70049023 0 0 #NAME? 0.001788335 0.008726926 Down 15.17474 2.541624 4.377866 2.56E-35 7.31E-38 1.38E-33 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27091_c0_g12_i1 4.745092387 9.490184775 0 0 #NAME? 0.001835435 0.008923197 Down 3.38028 0.8204808 1.660599 0 0 0 XP_011094445.1 probable glycosyltransferase At5g03795 [Sesamum indicum] Q9FFN2|GLYT3_ARATH Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana OX=3702 GN=At5g03795 PE=3 SV=2 -- -- -- -- -- -- KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1 [GMW] METABOLISM|CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING Carbohydrate transport and metabolism |Cell wall/membrane/envelope biogenesis |Extracellular structures S ENOG410XTFH Exostosin "Cellular Component: Golgi membrane (GO:0000139);|Biological Process: protein glycosylation (GO:0006486);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);|Biological Process: cell wall organization (GO:0071555);" -- -- TRINITY_DN27091_c0_g3_i1 189.3106287 329.2986199 49.32263746 0.149780881 -2.739074612 1.35E-27 6.80E-26 Down 44.19829 32.73541 37.81109 4.400933 5.185171 4.251237 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27091_c1_g1_i1 81.29958743 162.5991749 0 0 #NAME? 7.72E-51 8.59E-49 Down 12.19846 14.38185 12.80716 1.25E-66 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27093_c0_g1_i2 411.8184349 215.7299287 607.9069411 2.817907301 1.494624153 5.47E-10 8.01E-09 Up 14.03182 16.67746 20.9066 37.26505 33.24098 47.1951 XP_022886989.1 uncharacterized protein LOC111402900 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27098_c0_g1_i1 40.17533114 55.12174791 25.22891438 0.457694383 -1.127543509 0.008280964 0.03255654 Down 4.808535 3.59857 3.934403 0.3772348 2.489116 1.724161 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27098_c3_g1_i1 7.501259899 12.01042547 2.992094329 0.249124757 -2.005059696 0.046625511 0.134002982 Down 1.81057 0.7583724 2.576017 0 0.5695775 0.5910955 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27106_c0_g3_i3 581.0747416 1098.794013 63.35546985 0.057659096 -4.116307964 1.14E-176 6.55E-174 Down 28.78958 26.83212 27.3169 1.476889 1.297334 1.084353 PIN22009.1 Cytochrome P450 CYP4/CYP19/CYP26 subfamily [Handroanthus impetiginosus] Q9FMY1|C86B1_ARATH Cytochrome P450 86B1 OS=Arabidopsis thaliana OX=3702 GN=CYP86B1 PE=2 SV=1 vvi:100254406 K15402 CYP86B1 fatty acid omega-hydroxylase ko00073 "Cutin, suberine and wax biosynthesis" KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: suberin biosynthetic process (GO:0010345);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);|Biological Process: very long-chain fatty acid biosynthetic process (GO:0042761);|Biological Process: cell wall organization (GO:0071555);" PF00067.21 Cytochrome P450 TRINITY_DN27106_c0_g4_i2 640.9162014 399.7553081 882.0770947 2.206542544 1.141787564 6.90E-24 2.84E-22 Up 25.73337 31.28448 28.48988 48.27743 49.07522 55.02507 PIN06638.1 hypothetical protein CDL12_20807 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YVPM NA -- PF14009.5 Domain of unknown function (DUF4228) TRINITY_DN27109_c0_g2_i1 30.4019908 45.3708811 15.43310049 0.340154304 -1.555738751 0.001231747 0.006284442 Down 3.613121 2.990707 2.578506 0.6894824 0.4091402 1.393134 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2710_c0_g1_i1 7.444927912 12.62996323 2.259892593 0.178931051 -2.482524327 0.043230004 0.126244181 Down 2.230175 0.4395452 3.499593 0.4439552 0 0.4704366 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27113_c1_g1_i1 20.90764874 28.7651291 13.05016839 0.453680161 -1.140252523 0.0420265 0.123433548 Down 2.040566 4.899041 4.317283 0.8808684 1.466999 1.762927 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27121_c0_g1_i2 151.5776586 222.384577 80.77074023 0.363202976 -1.46115207 2.00E-11 3.44E-10 Down 6.018958 5.149344 5.330457 1.616274 1.811284 1.412069 PIN10260.1 Uracil-DNA glycosylase [Handroanthus impetiginosus] Q9SJQ6|ROS1_ARATH Protein ROS1 OS=Arabidopsis thaliana OX=3702 GN=ROS1 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- L COG0177 endonuclease III "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-(apurinic or apyrimidinic site) endonuclease activity (GO:0003906);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Biological Process: DNA repair (GO:0006281);|Biological Process: base-excision repair (GO:0006284);|Biological Process: DNA methylation (GO:0006306);|Biological Process: chromatin silencing (GO:0006342);|Molecular Function: DNA N-glycosylase activity (GO:0019104);|Biological Process: negative regulation of chromatin silencing (GO:0031936);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: defense response to fungus (GO:0050832);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);|Biological Process: DNA demethylation (GO:0080111);" -- -- TRINITY_DN27128_c1_g3_i1 28.8687412 57.7374824 0 0 #NAME? 1.53E-18 4.56E-17 Down 4.202546 2.910896 2.581723 0 0 0 XP_011077236.1 ethylene-responsive transcription factor 1B-like [Sesamum indicum] Q8LDC8|ERF92_ARATH Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2 sind:105161291 K14516 ERF1 ethylene-responsive transcription factor 1 ko04075 Plant hormone signal transduction -- -- -- -- -- S ENOG410XS5J prolyl 4-hydroxylase Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: defense response (GO:0006952);|Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);|Biological Process: ethylene-activated signaling pathway (GO:0009873); -- -- TRINITY_DN27128_c1_g4_i1 20.91113102 37.31056743 4.511694605 0.120922701 -3.047842981 0.000692158 0.003767279 Down 2.844038 6.409763 2.85833 0 0.4452621 0.6783908 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27131_c0_g1_i2 72.34359503 139.7897071 4.897482951 0.035034646 -4.835073857 5.79E-32 3.46E-30 Down 12.4773 10.461 9.789701 0 0.3077448 0.621453 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27131_c0_g2_i2 183.1449565 285.8599529 80.4299601 0.281361412 -1.829503613 1.44E-10 2.25E-09 Down 27.06756 39.09657 28.72955 8.474097 6.966428 6.129041 PWA66245.1 hypothetical protein CTI12_AA321330 [Artemisia annua] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27131_c0_g3_i4 109.8899169 181.6242791 38.15555459 0.210079593 -2.25099207 1.43E-17 3.99E-16 Down 11.69239 15.81163 12.50157 1.805307 1.884038 3.128893 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27131_c0_g4_i1 12.30569722 24.2256061 0.385788347 0.015924817 -5.972579385 3.04E-07 3.15E-06 Down 2.966078 3.246002 2.180088 3.14E-43 1.19E-52 0.1497859 KDP42436.1 hypothetical protein JCGZ_00233 [Jatropha curcas] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27131_c0_g5_i1 61.59035061 100.3534868 22.82721445 0.227468075 -2.136264017 5.92E-10 8.65E-09 Down 9.703999 7.512832 10.14035 1.415651 1.273712 2.312964 XP_019153442.1 PREDICTED: uncharacterized protein LOC109149905 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03004.13 Plant transposase (Ptta/En/Spm family) TRINITY_DN27139_c0_g1_i7 214.9530431 351.3046908 78.60139546 0.223741378 -2.160096009 1.73E-29 9.51E-28 Down 13.23009 14.29376 12.48751 2.419039 2.081943 2.744398 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27139_c0_g2_i4 423.5911365 615.418273 231.764 0.376595903 -1.408910792 6.38E-21 2.22E-19 Down 22.62801 17.94384 19.98465 6.120158 6.211348 6.102955 XP_011083995.1 AP2/ERF and B3 domain-containing transcription factor At1g50680 [Sesamum indicum] Q9C688|RAVL3_ARATH AP2/ERF and B3 domain-containing transcription factor At1g51120 OS=Arabidopsis thaliana OX=3702 GN=At1g51120 PE=2 SV=1 sind:105166361 K09287 RAV RAV-like factor -- -- -- -- -- -- -- K ENOG410YI8X AP2 domain-containing transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873); PF02362.20 B3 DNA binding domain TRINITY_DN27140_c1_g2_i2 28.23358616 52.02050378 4.446668537 0.085479152 -3.548283598 4.83E-05 0.000343367 Down 2.665228 5.603554 2.67342 0.6113542 1.66E-15 0.1202028 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27140_c1_g3_i1 48.74100557 73.52871604 23.95329511 0.325767896 -1.61808366 5.13E-05 0.00036276 Down 5.292696 8.835597 9.54379 1.996059 1.428938 2.894428 XP_012837853.1 PREDICTED: G patch domain-containing protein 4-like [Erythranthe guttata] -- -- sind:105164053 K11135 PINX1 Pin2-interacting protein X1 -- -- KOG2809 Telomerase elongation inhibitor/RNA maturation protein PINX1 [AD] INFORMATION STORAGE AND PROCESSING|CELLULAR PROCESSES AND SIGNALING "RNA processing and modification |Cell cycle control, cell division, chromosome partitioning " S ENOG4111IXK "PIN2 TERF1 interacting, telomerase inhibitor 1" -- -- -- TRINITY_DN27147_c0_g2_i1 147.5854448 254.0863409 41.08454879 0.161695228 -2.628650994 1.23E-28 6.51E-27 Down 10.13288 12.18648 9.882385 2.211552 1.015096 0.9731587 PIN07172.1 Kinesin-like protein [Handroanthus impetiginosus] F4J8L3|KN7K_ARATH "Kinesin-like protein KIN-7K, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KIN7K PE=2 SV=1" sind:105159650 K11498 CENPE centromeric protein E -- -- KOG0242 Kinesin-like protein [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5059 Kinesin family member Molecular Function: microtubule motor activity (GO:0003777);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: kinesin complex (GO:0005871);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based movement (GO:0007018);|Molecular Function: microtubule binding (GO:0008017);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: ATPase activity (GO:0016887); -- -- TRINITY_DN2714_c0_g1_i1 6.912581602 0.984156182 12.84100702 13.04773292 3.705727251 0.002959325 0.013499413 Up 0 0 0.4668032 2.095298 2.782603 0.7139887 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27153_c0_g1_i4 166.4547484 288.3222872 44.58720965 0.154643646 -2.69298054 1.60E-33 1.02E-31 Down 9.49505 9.254373 10.32651 1.130831 1.261134 1.250033 XP_011100903.1 alkane hydroxylase MAH1-like [Sesamum indicum] Q9FVS9|C96AF_ARATH Alkane hydroxylase MAH1 OS=Arabidopsis thaliana OX=3702 GN=CYP96A15 PE=2 SV=1 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: wax biosynthetic process (GO:0010025);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: heme binding (GO:0020037);|Molecular Function: midchain alkane hydroxylase activity (GO:0080133); PF00067.21 Cytochrome P450 TRINITY_DN27155_c0_g1_i1 26.57936223 50.96949121 2.18923326 0.042951837 -4.541136367 5.39E-12 9.76E-11 Down 3.561213 3.7989 4.452735 0.1995488 0.1973184 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27155_c0_g4_i1 41.29274431 63.77539616 18.81009247 0.294942777 -1.761493015 0.014727989 0.052604034 Down 12.12596 5.041069 6.398863 3.004573 1.613588 0.8792988 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27157_c0_g1_i5 192.1228307 126.1572322 258.0884293 2.045768005 1.032642549 5.33E-08 6.11E-07 Up 3.35883 4.747014 4.0508 6.812897 6.693061 6.53812 XP_011102311.1 uncharacterized protein LOC105180351 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41123CA Plant protein of unknown function (DUF946) -- PF06101.10 Vacuolar protein sorting-associated protein 62 TRINITY_DN2715_c0_g1_i1 15.66811896 24.00505202 7.33118589 0.305401791 -1.71121957 0.014855554 0.052961254 Down 3.614231 5.275907 2.865145 0.4880898 1.996037 0.5001792 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27160_c3_g1_i1 14.37125802 28.74251604 0 0 #NAME? 0.002921209 0.013356408 Down 9.708555 1.328905 3.192729 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27167_c0_g2_i3 166.1781512 86.47160953 245.8846929 2.843530891 1.507683477 3.66E-13 7.34E-12 Up 1.988585 2.618986 2.60545 5.061368 5.875584 5.595322 XP_011098370.1 probable beta-D-xylosidase 7 [Sesamum indicum] Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- G COG1472 hydrolase family 3 "Cellular Component: cell wall (GO:0005618);|Molecular Function: xylan 1,4-beta-xylosidase activity (GO:0009044);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: chloroplast (GO:0009507);|Biological Process: arabinan catabolic process (GO:0031222);|Biological Process: xylan catabolic process (GO:0045493);|Molecular Function: alpha-L-arabinofuranosidase activity (GO:0046556);|Cellular Component: apoplast (GO:0048046);" "PF01915.21,PF00933.20,PF14310.5" Glycosyl hydrolase family 3 C-terminal domain|Glycosyl hydrolase family 3 N terminal domain|Fibronectin type III-like domain TRINITY_DN27174_c4_g4_i1 37.90969823 0.624179352 75.1952171 120.4705296 6.912536457 4.73E-13 9.37E-12 Up 2.65E-34 0.2900451 2.64E-31 6.170463 8.51137 13.14418 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27174_c8_g1_i1 5.087919809 0 10.17583962 Inf Inf 0.000451282 0.00257771 Up 0 0 0 1.371453 0.6961185 2.858202 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27176_c0_g1_i1 89.97866066 133.4176168 46.5397045 0.348827281 -1.519415221 4.17E-08 4.85E-07 Down 3.253779 2.922526 3.468737 0.813878 0.8814651 1.019007 XP_026449720.1 probable serine/threonine protein phosphatase 2A regulatory subunit B''gamma [Papaver somniferum] Q5QIT3|2AB2B_ARATH Serine/threonine protein phosphatase 2A regulatory subunit B''beta OS=Arabidopsis thaliana OX=3702 GN=B''BETA PE=1 SV=1 mtr:MTR_7g116150 K11583 PPP2R3 serine/threonine-protein phosphatase 2A regulatory subunit B'' ko03015 mRNA surveillance pathway KOG2562 Protein phosphatase 2 regulatory subunit [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification T ENOG410XRBK "Protein phosphatase 2, regulatory subunit B" Cellular Component: protein phosphatase type 2A complex (GO:0000159);|Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: cytosol (GO:0005829);|Biological Process: protein dephosphorylation (GO:0006470);|Molecular Function: protein phosphatase regulator activity (GO:0019888); -- -- TRINITY_DN27184_c0_g2_i1 37.37143016 50.05490615 24.68795416 0.49321747 -1.019704194 0.016510174 0.057765246 Down 6.547887 6.843189 5.687027 1.615933 2.461041 3.606802 XP_011097929.1 kinesin-like protein KIN-14N [Sesamum indicum] P46875|KN14N_ARATH Kinesin-like protein KIN-14N OS=Arabidopsis thaliana OX=3702 GN=KIN14N PE=1 SV=1 sind:105176730 K10405 KIFC1 kinesin family member C1 -- -- KOG0239 Kinesin (KAR3 subfamily) [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5059 Kinesin family member Molecular Function: microtubule motor activity (GO:0003777);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: kinesin complex (GO:0005871);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based movement (GO:0007018);|Molecular Function: microtubule binding (GO:0008017);|Molecular Function: ATPase activity (GO:0016887);|Biological Process: spindle assembly (GO:0051225); PF00225.22 Kinesin motor domain TRINITY_DN27185_c0_g2_i3 85.23729527 136.0213882 34.45320231 0.253292536 -1.981123533 1.70E-11 2.94E-10 Down 5.503084 4.423681 5.081733 0.9248741 1.216554 0.9152626 XP_011097838.1 uncharacterized protein LOC105176662 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XQ41 Protein of unknown function (DUF3537) -- PF12056.7 Protein of unknown function (DUF3537) TRINITY_DN27189_c0_g2_i1 10.67249285 21.3449857 0 0 #NAME? 1.68E-06 1.55E-05 Down 3.536965 1.372887 1.875762 7.83E-21 7.62E-57 2.76E-41 KZV34961.1 hypothetical protein F511_04935 [Dorcoceras hygrometricum] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF00665.25 Integrase core domain TRINITY_DN27189_c0_g3_i1 9.156034613 18.31206923 0 0 #NAME? 2.27E-06 2.06E-05 Down 0.7763753 2.24106 1.672149 3.35E-48 1.12E-20 1.70E-22 KZV34961.1 hypothetical protein F511_04935 [Dorcoceras hygrometricum] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); "PF13976.5,PF00665.25" GAG-pre-integrase domain|Integrase core domain TRINITY_DN2718_c0_g1_i1 8.747969188 17.49593838 0 0 #NAME? 4.17E-06 3.61E-05 Down 0.9736305 1.55389 1.423051 0 0 0 XP_016489435.1 PREDICTED: uncharacterized protein LOC107809347 [Nicotiana tabacum] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN27198_c0_g4_i1 26.86446411 36.14757875 17.58134946 0.48637696 -1.039853206 0.044290202 0.128606649 Down 3.565955 3.985999 3.390016 0.8846586 2.772767 0.5689229 XP_024991208.1 protein HGH1 homolog [Cynara cardunculus var. scolymus] -- -- -- -- -- -- -- -- KOG2973 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG410YNU7 DNA-binding protein HGH1 -- -- -- TRINITY_DN27207_c2_g1_i1 109.9990826 155.1693106 64.8288546 0.417794307 -1.259135261 4.53E-07 4.57E-06 Down 5.477592 5.185103 5.33143 1.535914 1.744953 2.112087 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27207_c3_g1_i1 475.9869833 683.3284646 268.6455019 0.39314256 -1.346875542 1.36E-25 6.11E-24 Down 47.75982 44.17589 47.92626 16.00378 13.67948 14.70636 PSS05003.1 "Myosin-9 like, partial [Actinidia chinensis var. chinensis]" F4HWY6|MYO11_ARATH Myosin-11 OS=Arabidopsis thaliana OX=3702 GN=XI-E PE=3 SV=1 sind:105163579 K10357 MYO5 myosin V -- -- KOG0160 Myosin class V heavy chain [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5022 myosin heavy chain Molecular Function: microfilament motor activity (GO:0000146);|Molecular Function: motor activity (GO:0003774);|Molecular Function: actin binding (GO:0003779);|Molecular Function: calmodulin binding (GO:0005516);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: actin filament organization (GO:0007015);|Biological Process: pollen tube growth (GO:0009860);|Cellular Component: myosin complex (GO:0016459);|Biological Process: actin filament-based movement (GO:0030048);|Biological Process: organelle localization (GO:0051640); -- -- TRINITY_DN27211_c0_g2_i1 14.01648333 28.03296666 0 0 #NAME? 0.000161139 0.001022304 Down 8.379549 3.796391 2.014007 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27216_c0_g1_i4 313.1938363 106.5733158 519.8143568 4.877528233 2.286150224 2.92E-46 2.82E-44 Up 4.457433 3.929363 3.957307 15.55307 15.93467 17.09382 XP_022876401.1 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1 [Olea europaea var. sylvestris] Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=BAK1 PE=1 SV=2 sind:105169199 K13416 BAK1 brassinosteroid insensitive 1-associated receptor kinase 1 ko04626|ko04075 Plant-pathogen interaction|Plant hormone signal transduction KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG411233U receptor kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN27216_c0_g2_i3 1647.718418 637.7909947 2657.645842 4.166954165 2.058993231 1.20E-129 4.36E-127 Up 13.05444 11.89122 14.25932 42.87213 44.42377 44.64461 PNY14825.1 hypothetical protein L195_g011512 [Trifolium pratense] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YBAH Reverse transcriptase (RNA-dependent DNA polymerase) Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN27216_c0_g3_i1 12.4897467 5.794519798 19.1849736 3.310882397 1.727215767 0.022368388 0.074214162 Up 0.7532492 0.7255596 0.7373012 1.780921 2.533568 1.257616 XP_011076050.1 probably inactive receptor-like protein kinase At5g41680 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27217_c0_g2_i1 5.620955769 1.674386165 9.567525372 5.714049467 2.514513526 0.043349525 0.126544372 Up 0 0.5653066 0.4379611 1.108893 2.64419 0.9601176 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27223_c0_g1_i2 85.24192126 115.3191831 55.16465946 0.478364987 -1.063816298 0.000157854 0.001004408 Down 4.273558 3.548231 3.720412 1.441711 1.276308 1.748746 PIM97420.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9LV48|PERK1_ARATH Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN27224_c0_g3_i1 10.73139575 17.99069637 3.47209512 0.192993926 -2.373372653 0.007911015 0.031299981 Down 1.70739 2.460946 4.191642 0 0 1.264371 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27225_c1_g2_i1 32.83883874 46.10812283 19.56955464 0.424427486 -1.236410007 0.008696228 0.03392179 Down 1.772445 3.327487 2.926825 0.7249635 0.4817436 1.537423 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27234_c0_g1_i1 31.19933378 62.39866755 0 0 #NAME? 4.60E-20 1.51E-18 Down 2.363757 3.004593 2.174841 0 0 0 XP_019167734.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Ipomoea nil] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG410YEFW Pfam:hATC Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); "PF14372.5,PF05699.13" Domain of unknown function (DUF4413)|hAT family C-terminal dimerisation region TRINITY_DN27237_c0_g1_i3 10937.76074 6140.750114 15734.77136 2.562353306 1.357469413 4.99E-119 1.57E-116 Up 109.0838 104.5049 105.663 223.1639 221.9259 214.9613 XP_011100202.1 phosphoenolpyruvate carboxylase 1 [Sesamum indicum] Q9MAH0|CAPP1_ARATH Phosphoenolpyruvate carboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=PPC1 PE=1 SV=1 sind:105178436 K01595 ppc phosphoenolpyruvate carboxylase ko00710|ko00620 Carbon fixation in photosynthetic organisms|Pyruvate metabolism -- -- -- -- -- C COG2352 phosphoenolpyruvate carboxylase activity Cellular Component: cytosol (GO:0005829);|Biological Process: tricarboxylic acid cycle (GO:0006099);|Molecular Function: phosphoenolpyruvate carboxylase activity (GO:0008964);|Cellular Component: chloroplast (GO:0009507);|Biological Process: carbon fixation (GO:0015977);|Biological Process: photosynthesis (GO:0015979);|Biological Process: cellular response to phosphate starvation (GO:0016036);|Cellular Component: apoplast (GO:0048046);|Biological Process: leaf development (GO:0048366);|Biological Process: protein tetramerization (GO:0051262); PF00311.16 Phosphoenolpyruvate carboxylase TRINITY_DN27251_c0_g1_i2 264.8390265 114.3250255 415.3530276 3.633089307 1.86119683 9.17E-29 4.90E-27 Up 4.451788 3.741015 3.329301 10.96707 11.87018 10.87562 PIN17891.1 Beta-amylase [Handroanthus impetiginosus] O23553|BAM3_ARATH "Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3" sind:105155980 K01177 E3.2.1.2 beta-amylase ko00500 Starch and sucrose metabolism -- -- -- -- -- S ENOG410XRH5 beta-amylase Biological Process: maltose biosynthetic process (GO:0000024);|Biological Process: starch catabolic process (GO:0005983);|Biological Process: response to cold (GO:0009409);|Cellular Component: chloroplast stroma (GO:0009570);|Molecular Function: beta-amylase activity (GO:0016161);|Molecular Function: amylopectin maltohydrolase activity (GO:0102229); PF01373.16 Glycosyl hydrolase family 14 TRINITY_DN27263_c0_g1_i1 23.13285516 33.25455756 13.01115275 0.391259235 -1.35380329 0.01258262 0.046098698 Down 3.366497 2.496891 3.673648 1.220262 0.8111448 1.003867 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27263_c0_g2_i1 111.7404221 176.3312589 47.14958536 0.267392099 -1.902971261 0.005348713 0.022449758 Down 25.80714 15.94654 9.731839 4.437644 3.199053 3.380084 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27263_c0_g3_i1 49.52530093 99.05060185 0 0 #NAME? 6.08E-08 6.92E-07 Down 30.56638 25.72565 7.38699 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27263_c0_g6_i1 76.51226494 119.9021436 33.12238624 0.276245155 -1.855978934 4.22E-05 0.000303062 Down 16.08445 8.756405 11.05401 3.319676 1.89202 2.749183 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27271_c0_g1_i3 69.98763716 98.55276204 41.42251228 0.420307979 -1.250481249 5.43E-05 0.000381991 Down 4.980536 4.228644 5.71205 1.819395 1.931125 1.317994 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27272_c0_g2_i1 10.53345352 1.302446252 19.76446079 15.17487632 3.923612853 3.83E-05 0.000277527 Up 0.6704955 0 0 2.461625 2.1278 3.044626 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27277_c0_g2_i1 15.95889666 6.534195739 25.38359757 3.884731739 1.957814976 0.004347515 0.018816431 Up 2.270399 0 1.833244 2.390064 4.803195 5.884451 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27280_c0_g5_i1 25.14511279 50.29022557 0 0 #NAME? 3.73E-07 3.81E-06 Down 5.015374 6.103495 1.590354 1.38E-59 1.45E-58 6.18E-57 XP_011083298.1 "polyphenol oxidase I, chloroplastic [Sesamum indicum]" Q9MB14|PPO2_IPOBA "Polyphenol oxidase II, chloroplastic OS=Ipomoea batatas OX=4120 GN=co-2 PE=2 SV=2" sind:105165833 K00422 E1.10.3.1 polyphenol oxidase ko00950|ko00350 Isoquinoline alkaloid biosynthesis|Tyrosine metabolism -- -- -- -- -- -- -- -- Molecular Function: catechol oxidase activity (GO:0004097);|Cellular Component: chloroplast thylakoid lumen (GO:0009543);|Biological Process: pigment biosynthetic process (GO:0046148);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN27293_c0_g1_i1 29.80735641 45.55622933 14.0584835 0.308596293 -1.696207363 0.000483392 0.002742486 Down 10.44965 7.114237 11.13099 2.035133 3.185527 1.979573 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27293_c1_g2_i1 137.3007632 85.49789245 189.103634 2.21179293 1.145216325 3.67E-07 3.76E-06 Up 2.487637 2.627726 3.023764 5.20945 4.555181 4.80231 PIN21521.1 Serine/threonine protein kinase [Handroanthus impetiginosus] O64825|LYK4_ARATH LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24,PF01476.19" Protein tyrosine kinase|Protein kinase domain|LysM domain TRINITY_DN27303_c0_g2_i2 11.406789 17.62451915 5.189058853 0.294422719 -1.764039093 0.049082448 0.139590225 Down 1.111417 3.20953 4.501869 5.14E-05 1.254397 0.8194556 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27303_c0_g3_i4 92.06013758 180.4114416 3.708833535 0.02055764 -5.60418151 2.26E-45 2.14E-43 Down 7.312943 8.3072 8.11604 0.101076 0.1483114 0.1062271 XP_011091264.1 uncharacterized protein LOC105171751 [Sesamum indicum] C4R7Z3|C9MT_KOMPG Sphingolipid C9-methyltransferase OS=Komagataella phaffii (strain GS115 / ATCC 20864) OX=644223 GN=PAS_chr4_0465 PE=1 SV=1 sind:105171751 K00574 cfa cyclopropane-fatty-acyl-phospholipid synthase -- -- -- -- -- -- -- M COG2230 cyclopropane-fatty-acyl-phospholipid synthase Biological Process: sphingolipid metabolic process (GO:0006665);|Molecular Function: methyltransferase activity (GO:0008168);|Biological Process: lipid biosynthetic process (GO:0008610);|Cellular Component: integral component of membrane (GO:0016021); "PF02353.19,PF13649.5,PF08241.11,PF13489.5,PF13847.5,PF08242.11" Mycolic acid cyclopropane synthetase|Methyltransferase domain|Methyltransferase domain|Methyltransferase domain|Methyltransferase domain|Methyltransferase domain TRINITY_DN27303_c0_g4_i1 25.27682165 47.46733654 3.086306774 0.06501959 -3.942981725 3.09E-10 4.65E-09 Down 7.362796 10.04453 11.63255 0 0 1.598647 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27305_c2_g2_i1 6.552919765 13.10583953 0 0 #NAME? 9.98E-05 0.000662037 Down 2.808636 1.632724 3.157534 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27305_c2_g3_i1 5.337787817 10.67557563 0 0 #NAME? 0.000728508 0.003943379 Down 2.046299 3.098065 0.8253091 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27305_c3_g1_i4 101.1163747 167.7078098 34.52493959 0.205863637 -2.280239078 0.014075469 0.050660304 Down 12.48055 49.98141 30.4397 9.041087 2.231133 4.044985 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27305_c4_g1_i1 87.2349274 23.04441913 151.4254357 6.571024196 2.716118254 1.84E-19 5.84E-18 Up 0.5364334 0.7629648 0.6981488 3.001716 3.627485 3.889438 XP_024021985.1 uncharacterized protein LOC112091773 [Morus notabilis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF13650.5 Aspartyl protease TRINITY_DN27308_c0_g1_i1 33.866374 20.65699792 47.07575008 2.278925053 1.18835348 0.010099114 0.038355847 Up 1.29777 0.8209175 2.049008 2.268631 3.064748 2.388405 XP_022735516.1 receptor-like protein 12 [Durio zibethinus] Q9M9X0|RLP32_ARATH Receptor-like protein 32 OS=Arabidopsis thaliana OX=3702 GN=RLP32 PE=2 SV=1 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN27332_c0_g5_i1 18.93750458 26.81389393 11.06111522 0.41251432 -1.277483893 0.040465441 0.119744103 Down 7.842046 3.915423 4.872479 1.830825 2.447703 1.24537 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27338_c0_g3_i6 47.60078438 72.57824173 22.62332703 0.311709494 -1.681725996 1.19E-05 9.51E-05 Down 2.73836 2.946362 3.155075 0.8524296 0.7064223 0.6430239 XP_011075343.2 zeatin O-glucosyltransferase [Sesamum indicum] Q9ZSK5|ZOG_PHALU Zeatin O-glucosyltransferase OS=Phaseolus lunatus OX=3884 GN=ZOG1 PE=2 SV=1 sind:105159838 K13495 CISZOG cis-zeatin O-glucosyltransferase ko00908 Zeatin biosynthesis KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Biological Process: protein glycosylation (GO:0006486);|Biological Process: cytokinin metabolic process (GO:0009690);|Biological Process: leaf morphogenesis (GO:0009965);|Biological Process: root morphogenesis (GO:0010015);|Biological Process: regulation of vegetative meristem growth (GO:0010083);|Biological Process: regulation of chlorophyll biosynthetic process (GO:0010380);|Biological Process: negative regulation of growth (GO:0045926);|Biological Process: seed development (GO:0048316);|Biological Process: flower morphogenesis (GO:0048439);|Molecular Function: trans-zeatin O-beta-D-glucosyltransferase activity (GO:0050403);|Molecular Function: zeatin O-beta-D-xylosyltransferase activity (GO:0050404); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN27344_c0_g2_i1 15.76236182 5.038239185 26.48648444 5.25709151 2.394264848 0.000747347 0.004027582 Up 0.8177481 0.263735 1.033876 3.050999 2.301833 3.553466 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27359_c0_g1_i7 2668.551671 1333.679745 4003.423597 3.001787807 1.585821998 3.14E-105 8.47E-103 Up 25.07978 24.2015 22.32153 57.1898 56.96438 59.30261 XP_011082458.1 magnesium/proton exchanger-like isoform X1 [Sesamum indicum] O22252|MHX_ARATH Magnesium/proton exchanger OS=Arabidopsis thaliana OX=3702 GN=MHX PE=2 SV=3 sind:105165220 K03452 MHX magnesium/proton exchanger -- -- KOG1306 Ca2+/Na+ exchanger NCX1 and related proteins [PT] METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Signal transduction mechanisms P ENOG410XPJP Solute carrier family 8 sodium calcium exchanger member Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: ion transport (GO:0006811);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: transmembrane transport (GO:0055085); PF01699.23 Sodium/calcium exchanger protein TRINITY_DN27363_c0_g2_i1 85.22726374 168.2234619 2.231065533 0.013262511 -6.23650223 4.91E-45 4.61E-43 Down 7.203667 6.540963 6.14618 0.05660486 0.05608718 0.05941505 XP_020553281.1 uncharacterized protein LOC105173237 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27363_c0_g7_i1 35.52472391 23.18384188 47.86560594 2.06461061 1.045869712 0.017151365 0.059545078 Up 1.459948 2.653387 2.375476 3.069003 4.215309 3.496026 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27370_c0_g2_i1 8.461734068 15.05991179 1.863556349 0.123742846 -3.014582972 0.00840565 0.032958251 Down 1.796588 2.471811 0.5128303 0.1082368 0.2157119 0.2249107 XP_022890703.1 "protein FAF-like, chloroplastic [Olea europaea var. sylvestris]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27376_c0_g1_i1 15.18400743 29.6435444 0.724470471 0.024439401 -5.354647259 3.72E-08 4.36E-07 Down 3.547925 2.557302 2.526858 1.52E-31 0.174239 1.42E-16 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27376_c0_g2_i1 8.062466765 15.03822782 1.086705707 0.072262884 -3.790601364 0.000966447 0.005065224 Down 1.640929 2.439163 2.85036 0 0.4264261 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27376_c0_g3_i1 18.36925697 36.73851394 0 0 #NAME? 3.86E-12 7.08E-11 Down 4.096687 6.209808 5.101093 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27377_c0_g4_i1 20.22501877 35.73043159 4.719605959 0.132089251 -2.920415022 8.16E-06 6.71E-05 Down 3.522498 3.283798 3.313236 0.1281172 0.8915118 2.01E-82 -- -- O04866|ARGD_ALNGL "Acetylornithine aminotransferase, mitochondrial OS=Alnus glutinosa OX=3517 GN=AG118 PE=2 SV=1" sly:101245573 K00818 "E2.6.1.11, argD" acetylornithine aminotransferase ko00220 Arginine biosynthesis -- -- -- -- -- -- -- -- Molecular Function: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity (GO:0003992);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: arginine biosynthetic process (GO:0006526);|Molecular Function: pyridoxal phosphate binding (GO:0030170); -- -- TRINITY_DN27395_c0_g2_i1 96.39886589 142.9321655 49.86556632 0.348875749 -1.519214777 1.71E-08 2.10E-07 Down 3.772318 3.102697 3.529293 0.995951 0.8977664 1.059499 PIN20303.1 "Endosomal membrane protein, EMP70 [Handroanthus impetiginosus]" Q9FYQ8|TMN11_ARATH Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana OX=3702 GN=TMN11 PE=2 SV=1 -- -- -- -- -- -- KOG1278 "Endosomal membrane proteins, EMP70" [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " S ENOG410XPIW transmembrane 9 superfamily Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: endosome (GO:0005768);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: endosome membrane (GO:0010008);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein localization to membrane (GO:0072657); PF02990.15 Endomembrane protein 70 TRINITY_DN27402_c0_g2_i1 21.44676727 39.15341663 3.740117911 0.095524688 -3.387982548 3.07E-07 3.17E-06 Down 3.594495 4.285665 2.187003 0 0.4031881 0.397402 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27410_c1_g3_i2 37.96964414 51.67368078 24.26560749 0.469593169 -1.090516674 0.009353097 0.036062612 Down 5.10282 3.846089 4.535921 1.220803 1.687412 2.202727 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27417_c0_g1_i4 370.8722311 202.274831 539.4696313 2.667013136 1.415224931 2.06E-23 8.23E-22 Up 6.424381 6.729197 5.862545 12.86972 14.11322 13.9245 XP_020549070.1 uncharacterized protein LOC105160004 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111ZZY "DUF1336 domain containing protein, expressed" -- PF07059.11 Protein of unknown function (DUF1336) TRINITY_DN2741_c0_g1_i1 6.696204707 13.39240941 0 0 #NAME? 0.011600786 0.043085787 Down 0.2945281 3.428013 1.368658 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27421_c0_g2_i1 40.88132354 62.54357248 19.21907461 0.307290963 -1.702322756 0.004664943 0.019982612 Down 5.473002 7.899827 3.188311 1.479526 1.631827 0.9797018 XP_008795402.1 homeobox-leucine zipper protein ROC5 [Phoenix dactylifera] Q7Y0V7|ROC6_ORYSJ Homeobox-leucine zipper protein ROC6 OS=Oryza sativa subsp. japonica OX=39947 GN=ROC6 PE=2 SV=2 pda:103711149 K09338 HD-ZIP homeobox-leucine zipper protein -- -- -- -- -- -- -- K ENOG411107H Homeobox-leucine zipper protein "Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: lipid binding (GO:0008289);|Molecular Function: sequence-specific DNA binding (GO:0043565);" -- -- TRINITY_DN27423_c0_g1_i1 91.36152214 128.3064084 54.41663588 0.424114715 -1.237473554 6.10E-06 5.13E-05 Down 4.413094 4.609266 4.245213 1.484018 1.291113 1.754931 XP_011075906.1 growth-regulating factor 2 [Sesamum indicum] Q6ZIK5|GRF4_ORYSJ Growth-regulating factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF4 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG4111821 WRC "Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: transcription, DNA-templated (GO:0006351);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: developmental process (GO:0032502);" "PF08879.9,PF08880.10" WRC|QLQ TRINITY_DN27427_c0_g2_i3 8.304796338 0 16.60959268 Inf Inf 0.000735694 0.00397564 Up 0 0 0 0.5374454 2.888979 1.341857 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27428_c1_g2_i1 13.08425025 22.69640538 3.47209512 0.152979957 -2.708585447 0.000869394 0.00460871 Down 2.885693 6.410993 3.992796 0 0 1.619069 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27432_c3_g1_i7 122.0245714 169.3307506 74.71839226 0.441257078 -1.180308674 0.014405959 0.051653215 Down 23.25897 15.68656 10.86383 5.160234 4.824659 7.670044 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27446_c0_g1_i15 52.25288116 104.1382531 0.367509184 0.003529051 -8.146504092 9.24E-32 5.50E-30 Down 3.825562 4.630079 5.415018 0.02905432 0 0 AIC59005.1 "HLA-C, partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- U ENOG4111K8F antigen processing and presentation of peptide antigen via MHC class I -- "PF00129.17,PF07654.14,PF06623.10,PF13927.5" "Class I Histocompatibility antigen, domains alpha 1 and 2|Immunoglobulin C1-set domain|MHC_I C-terminus|Immunoglobulin domain" TRINITY_DN27446_c0_g2_i1 37.34262931 74.68525862 0 0 #NAME? 6.68E-24 2.75E-22 Down 1.767822 2.320768 1.777508 1.87E-24 0 0 ABM82817.1 "major histocompatibility complex, class I, E [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- U ENOG410YKQA "antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent" -- "PF00129.17,PF07654.14,PF16497.4,PF06623.10" "Class I Histocompatibility antigen, domains alpha 1 and 2|Immunoglobulin C1-set domain|MHC-I family domain|MHC_I C-terminus" TRINITY_DN27449_c0_g1_i12 273.8198572 441.0728592 106.5668552 0.241608281 -2.049258193 1.59E-33 1.02E-31 Down 11.55327 12.20457 12.47751 2.428525 2.346239 2.278587 XP_021850373.1 replication protein A 70 kDa DNA-binding subunit B-like [Spinacia oleracea] -- -- sot:102582542 K07466 "RFA1, RPA1, rpa" replication factor A1 ko03430|ko03030|ko03440|ko03420 Mismatch repair|DNA replication|Homologous recombination|Nucleotide excision repair -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27453_c0_g2_i1 30.32582945 42.17533393 18.47632498 0.438083668 -1.190721665 0.009963329 0.037941726 Down 1.810784 1.568265 2.819411 0.8701835 0.8170445 0.5196958 XP_011070837.1 transcriptional repressor ILP1 [Sesamum indicum] -- -- sind:105156418 K13211 GCFC GC-rich sequence DNA-binding factor -- -- -- -- -- -- -- K ENOG410YU43 GC-rich sequence DNA-binding factor -- -- -- TRINITY_DN27455_c0_g7_i1 8.313639391 16.62727878 0 0 #NAME? 7.84E-06 6.47E-05 Down 2.016484 1.523549 2.245042 0 0 0 PRQ53570.1 "putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Rosa chinensis]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF13966.5 zinc-binding in reverse transcriptase TRINITY_DN27458_c1_g1_i3 82.23702359 163.7024705 0.771576693 0.004713287 -7.729050813 1.57E-30 8.98E-29 Down 6.500494 7.418282 4.608756 1.94E-100 1.25E-93 0.06579363 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27459_c0_g2_i1 16.48771199 27.06189466 5.913529324 0.218518674 -2.194171524 0.00693079 0.028012585 Down 6.06684 4.446654 2.139634 0 1.532571 0.7765321 XP_017258187.1 PREDICTED: heat shock protein 83-like [Daucus carota subsp. sativus] P51819|HSP83_IPONI Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1 sind:105166705 K04079 "htpG, HSP90A" molecular chaperone HtpG ko04141|ko04626 Protein processing in endoplasmic reticulum|Plant-pathogen interaction KOG0019 Molecular chaperone (HSP90 family) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0326 Molecular chaperone. Has ATPase activity (By similarity) Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein folding (GO:0006457);|Molecular Function: unfolded protein binding (GO:0051082); -- -- TRINITY_DN27471_c0_g3_i1 7.303784966 1.722273319 12.88529661 7.481563157 2.90333973 0.014815043 0.052852818 Up 0 0 1.090615 1.445007 3.613016 1.473136 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27474_c0_g1_i1 660.3267314 352.7573839 967.8960789 2.743801046 1.456175875 6.40E-38 4.78E-36 Up 8.039548 6.085155 7.739281 16.45893 16.0163 15.94282 XP_011098409.1 uncharacterized protein LOC105177084 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XQIH Protein of unknown function (DUF2921) -- PF11145.7 Protein of unknown function (DUF2921) TRINITY_DN27476_c0_g4_i2 22.95613518 15.1468058 30.76546457 2.031151979 1.022298192 0.045860732 0.132258972 Up 1.887963 3.061695 0.9598187 3.362001 3.301567 2.81201 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27478_c0_g3_i1 43.63236193 62.9606321 24.30409175 0.386020453 -1.373250804 0.000519 0.002920412 Down 4.643092 3.593057 5.229038 2.194786 1.394181 0.5839917 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27481_c0_g1_i8 434.9438587 198.9815478 670.9061695 3.371700426 1.753476359 3.41E-38 2.58E-36 Up 4.332805 4.58421 4.860975 12.6497 12.69131 12.15384 XP_011099458.1 glycine-rich domain-containing protein 1-like [Sesamum indicum] Q9ZQ47|GRDP1_ARATH Glycine-rich domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=GRDP1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111FEQ Protein of unknown function (DUF1399) Cellular Component: plasma membrane (GO:0005886);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: regulation of abscisic acid-activated signaling pathway (GO:0009787);|Biological Process: cellular response to osmotic stress (GO:0071470); PF07173.11 Glycine-rich domain-containing protein-like TRINITY_DN27483_c0_g2_i1 16.35542741 4.486310857 28.22454397 6.291259093 2.653348778 0.000108875 0.000716239 Up 0.7179658 1.33E-64 0.2690572 1.860668 1.537025 1.585883 XP_011074238.1 BURP domain-containing protein 16 [Sesamum indicum] P92982|PGL1_ARATH Polygalacturonase 1 beta-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PGL1 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDAC Noncatalytic subunit Cellular Component: cell wall (GO:0005618);|Cellular Component: apoplast (GO:0048046); PF03181.14 BURP domain TRINITY_DN27496_c0_g1_i1 9.501946418 19.00389284 0 0 #NAME? 0.001256974 0.006394465 Down 5.523366 0.4282144 4.803914 7.45E-37 0 1.98E-39 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27496_c0_g2_i1 23.39385142 46.78770284 0 0 #NAME? 3.94E-10 5.88E-09 Down 11.6394 6.044331 5.922024 2.73E-26 4.83E-74 3.56E-29 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27497_c0_g1_i1 28.19110856 41.47622365 14.90599347 0.359386467 -1.476392012 0.002332397 0.010983972 Down 2.537255 2.546711 3.917009 0.7940704 0.7907158 1.048158 XP_021291163.1 mitogen-activated protein kinase homolog D5 isoform X2 [Herrania umbratica] Q39026|MPK6_ARATH Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana OX=3702 GN=MPK6 PE=1 SV=1 sind:105176511 K14512 MPK6 mitogen-activated protein kinase 6 ko04075 Plant hormone signal transduction KOG0660 Mitogen-activated protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XNY0 Mitogen-activated protein kinase "Biological Process: response to reactive oxygen species (GO:0000302);|Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: MAP kinase activity (GO:0004707);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: trans-Golgi network (GO:0005802);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to oxidative stress (GO:0006979);|Biological Process: response to cold (GO:0009409);|Cellular Component: phragmoplast (GO:0009524);|Biological Process: pollen development (GO:0009555);|Cellular Component: preprophase band (GO:0009574);|Biological Process: response to fungus (GO:0009620);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to ethylene (GO:0009723);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);|Biological Process: camalexin biosynthetic process (GO:0010120);|Biological Process: leaf senescence (GO:0010150);|Biological Process: pollen tube guidance (GO:0010183);|Biological Process: response to UV-B (GO:0010224);|Biological Process: inflorescence development (GO:0010229);|Biological Process: regulation of gene expression (GO:0010468);|Molecular Function: phosphatase binding (GO:0019902);|Biological Process: intracellular signal transduction (GO:0035556);|Biological Process: response to hydrogen peroxide (GO:0042542);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: root development (GO:0048364);|Biological Process: plant ovule development (GO:0048481);|Biological Process: response to freezing (GO:0050826);|Biological Process: cell division (GO:0051301);|Biological Process: priming of cellular response to stress (GO:0080136);|Biological Process: response to L-glutamate (GO:1902065);" "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN27507_c0_g2_i1 6.56671262 11.9760602 1.15736504 0.096639882 -3.371237502 0.005691236 0.023664217 Down 2.523443 1.453244 2.677182 2.38E-57 0 0.5208229 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27512_c0_g1_i2 91.33841088 35.74971617 146.9271056 4.109881737 2.039096881 5.14E-13 1.02E-11 Up 0.5433839 0.7097013 0.6691135 1.997347 2.092628 2.300505 XP_020550113.1 protein transport protein Sec24-like At3g07100 [Sesamum indicum] Q9SFU0|SC24A_ARATH Protein transport protein Sec24-like At3g07100 OS=Arabidopsis thaliana OX=3702 GN=At3g07100 PE=2 SV=2 sind:105163315 K14007 SEC24 protein transport protein SEC24 ko04141 Protein processing in endoplasmic reticulum KOG1985 "Vesicle coat complex COPII, subunit SEC24/subunit SFB2" [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U COG5028 "SEC24 family, member" Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: intracellular protein transport (GO:0006886);|Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);|Biological Process: endoplasmic reticulum organization (GO:0007029);|Biological Process: Golgi organization (GO:0007030);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: regulation of cell size (GO:0008361);|Cellular Component: COPII vesicle coat (GO:0030127);|Biological Process: negative regulation of DNA endoreduplication (GO:0032876);|Cellular Component: endoplasmic reticulum-Golgi intermediate compartment membrane (GO:0033116);|Biological Process: male gamete generation (GO:0048232);|Biological Process: ER body organization (GO:0080119); "PF04811.14,PF04815.14,PF08033.11,PF04810.14" Sec23/Sec24 trunk domain|Sec23/Sec24 helical domain|Sec23/Sec24 beta-sandwich domain|Sec23/Sec24 zinc finger TRINITY_DN27512_c0_g2_i4 131.6879243 244.6773571 18.69849156 0.076421013 -3.709886803 4.76E-42 4.05E-40 Down 10.14477 9.172524 9.261955 0.4310058 0.5163805 0.8128714 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27512_c0_g3_i4 24.45349573 46.26658447 2.640406991 0.057069417 -4.131138371 3.95E-10 5.89E-09 Down 5.556385 5.526041 4.21844 0.1908561 0.09465798 0.4114399 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27512_c0_g4_i1 4.925282243 9.850564485 0 0 #NAME? 0.013332601 0.048451427 Down 2.748119 3.532789 0 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27515_c0_g1_i1 203.0761418 86.37315531 319.7791283 3.702297631 1.888420879 3.92E-23 1.55E-21 Up 2.148744 3.08704 2.39141 6.919646 7.771788 8.137462 EYU18391.1 hypothetical protein MIMGU_mgv1a022316mg [Erythranthe guttata] Q9LSL5|LRK92_ARATH L-type lectin-domain containing receptor kinase IX.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK92 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00139.18,PF00069.24,PF07714.16,PF03388.12" Legume lectin domain|Protein kinase domain|Protein tyrosine kinase|Legume-like lectin family TRINITY_DN27528_c0_g2_i1 10.61769621 16.45813235 4.777260079 0.290267448 -1.784545304 0.040939193 0.120852753 Down 3.157133 2.716619 1.681383 0.592923 0.8964765 0.3136439 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27533_c0_g5_i1 18.71509012 28.53192854 8.898251705 0.31186997 -1.680983452 0.008070035 0.031851413 Down 4.102905 3.396428 2.466001 1.2153 0.6089383 0.6082177 XP_022634290.1 OTU domain-containing protein 5 isoform X2 [Vigna radiata var. radiata] -- -- -- -- -- -- -- -- KOG2605 OTU (ovarian tumor)-like cysteine protease [TO] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Signal transduction mechanisms |Posttranslational modification, protein turnover, chaperones " O ENOG410XNYW OTU domain containing -- -- -- TRINITY_DN27536_c0_g2_i1 5.014076756 10.02815351 0 0 #NAME? 0.009899648 0.037749894 Down 0 2.795161 3.420884 0 0 0 -- -- Q9ZT42|RHF2A_ARATH E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1 -- -- -- -- -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " -- -- -- Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: megagametogenesis (GO:0009561);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603);|Biological Process: regulation of cell cycle (GO:0051726);|Biological Process: microgametogenesis (GO:0055046); -- -- TRINITY_DN27537_c0_g2_i1 13.94571488 22.17772122 5.713708551 0.257632806 -1.956611782 0.008239281 0.032420743 Down 4.469842 5.331555 2.605251 0.6583929 0 1.984732 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27543_c1_g1_i2 524.2039453 1046.948402 1.45948884 0.001394041 -9.486511447 3.78E-280 3.43E-277 Down 52.94532 55.61823 50.78045 0.08076192 0.07998876 3.53E-21 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27544_c0_g2_i1 3794.710014 7316.669183 272.7508437 0.037278007 -4.745531466 0 0 Down 549.1736 556.0801 572.8795 15.98895 16.15183 18.38321 EYU22302.1 hypothetical protein MIMGU_mgv1a013790mg [Erythranthe guttata] P32765|ASP_THECC 21 kDa seed protein OS=Theobroma cacao OX=3641 GN=ASP PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YHN1 trypsin and protease inhibitor family protein Kunitz family protein Molecular Function: endopeptidase inhibitor activity (GO:0004866); PF00197.17 Trypsin and protease inhibitor TRINITY_DN27549_c0_g5_i1 266.8655231 108.6730112 425.0580349 3.911348643 1.967666138 7.25E-32 4.33E-30 Up 21.10281 21.14878 16.13377 65.09692 60.48246 58.58695 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27550_c0_g1_i1 1750.60407 1144.502995 2356.705145 2.059151575 1.042050031 1.05E-38 8.04E-37 Up 29.43193 28.69674 29.71078 48.62267 50.80098 46.51961 XP_011095913.1 oligopeptide transporter 3 [Sesamum indicum] O23482|OPT3_ARATH Oligopeptide transporter 3 OS=Arabidopsis thaliana OX=3702 GN=OPT3 PE=2 SV=3 -- -- -- -- -- -- KOG2262 Sexual differentiation process protein ISP4 [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XNZC oligo-peptide transporter Cellular Component: plasma membrane (GO:0005886);|Biological Process: cellular metal ion homeostasis (GO:0006875);|Biological Process: multicellular organism development (GO:0007275);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: protein transport (GO:0015031);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transition metal ion transmembrane transporter activity (GO:0046915);|Biological Process: iron ion homeostasis (GO:0055072);|Biological Process: xylem-to-phloem iron transport (GO:1990388); PF03169.14 OPT oligopeptide transporter protein TRINITY_DN27556_c0_g2_i1 4.65565873 9.31131746 0 0 #NAME? 0.001560099 0.007733707 Down 0.9688404 0.5147871 1.232222 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27561_c0_g4_i1 42.04275099 73.33424182 10.75126016 0.146606277 -2.769981222 5.31E-10 7.81E-09 Down 7.636222 7.756339 5.027147 0.9385048 0.793713 0.6858491 PWA56832.1 hypothetical protein CTI12_AA415010 [Artemisia annua] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZYE2 NA -- -- -- TRINITY_DN27566_c0_g1_i4 268.3120949 116.0573002 420.5668896 3.623786602 1.857498 1.40E-28 7.42E-27 Up 4.048572 3.373023 3.586298 10.13817 11.09267 10.94728 XP_011089500.1 scarecrow-like protein 30 [Sesamum indicum] Q9XE58|SCL14_ARATH Scarecrow-like protein 14 OS=Arabidopsis thaliana OX=3702 GN=SCL14 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YMPH "transcription, DNA-dependent" "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: response to xenobiotic stimulus (GO:0009410);|Biological Process: response to chitin (GO:0010200);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);" PF03514.13 GRAS domain family TRINITY_DN27570_c0_g2_i2 31.66267771 54.47912457 8.846230851 0.162378359 -2.622568724 0.000598105 0.003310543 Down 8.919972 5.623641 3.878697 1.957738 0.201659 0.2074773 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27572_c0_g1_i3 3902.131132 2587.954249 5216.308015 2.015610599 1.011216948 2.21E-52 2.56E-50 Up 69.5327 68.50304 68.51137 111.7172 113.2358 110.9913 XP_011071378.1 ATP-citrate synthase beta chain protein 2 [Sesamum indicum] Q9FGX1|ACLB2_ARATH ATP-citrate synthase beta chain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ACLB-2 PE=1 SV=1 sind:105156841 K01648 ACLY ATP citrate (pro-S)-lyase ko00020 Citrate cycle (TCA cycle) KOG1254 ATP-citrate lyase [C] METABOLISM Energy production and conversion C COG0074 Succinyl-CoA ligase ADP-forming subunit alpha Molecular Function: ATP citrate synthase activity (GO:0003878);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: acetyl-CoA biosynthetic process (GO:0006085);|Biological Process: lipid metabolic process (GO:0006629);|Cellular Component: citrate lyase complex (GO:0009346);|Molecular Function: metal ion binding (GO:0046872); "PF00285.20,PF00549.18,PF13607.5" "Citrate synthase, C-terminal domain|CoA-ligase|Succinyl-CoA ligase like flavodoxin domain" TRINITY_DN27579_c0_g2_i1 10.91909244 21.83818489 0 0 #NAME? 1.79E-07 1.90E-06 Down 3.420632 1.859143 3.234258 7.56E-53 4.39E-40 2.89E-52 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27580_c0_g1_i1 15.89227441 24.37742964 7.407119173 0.303851525 -1.718561562 0.014085833 0.050685264 Down 4.314859 4.018576 2.129916 0.521196 1.286418 0.7450894 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27580_c1_g1_i7 152.0558086 286.372768 17.73884929 0.061943213 -4.012909978 6.96E-39 5.37E-37 Down 8.832666 6.611737 7.141918 0.5041918 0.3775585 0.2531751 XP_011087588.1 "ferric reduction oxidase 7, chloroplastic [Sesamum indicum]" Q8RWS6|FRO6_ARATH Ferric reduction oxidase 6 OS=Arabidopsis thaliana OX=3702 GN=FRO6 PE=2 SV=1 -- -- -- -- -- -- KOG0039 "Ferric reductase, NADH/NADPH oxidase and related proteins" [PQ] METABOLISM|METABOLISM "Inorganic ion transport and metabolism |Secondary metabolites biosynthesis, transport and catabolism " U ENOG410XNZY NADPH Oxidase Molecular Function: ferric-chelate reductase activity (GO:0000293);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: ion transport (GO:0006811);|Biological Process: response to light stimulus (GO:0009416);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872); "PF08022.11,PF08030.11" FAD-binding domain|Ferric reductase NAD binding domain TRINITY_DN27580_c1_g3_i1 16.53283506 24.87642635 8.189243764 0.329196953 -1.602977111 0.014034465 0.050550794 Down 3.947981 1.631332 3.729493 0.6151604 0.9069647 0.9275885 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27587_c0_g1_i3 89.30731914 144.1115131 34.50312517 0.23941963 -2.062386651 1.66E-12 3.17E-11 Down 6.415939 5.341647 4.387615 1.111082 1.04181 0.9476709 XP_012836036.1 PREDICTED: uncharacterized protein LOC105956698 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27589_c0_g2_i1 35.1635045 53.96152668 16.36548231 0.303280565 -1.721275044 0.003490728 0.015563756 Down 8.59256 8.832003 3.653466 1.55688 1.68733 1.864829 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27589_c0_g3_i1 22.59285481 42.92581703 2.259892593 0.052646467 -4.247519482 7.61E-10 1.10E-08 Down 2.466191 4.283917 3.980508 0.2291583 0 0.2453102 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27593_c0_g1_i8 66.84224962 133.6844992 0 0 #NAME? 3.15E-42 2.70E-40 Down 6.196063 5.626348 6.89427 0 0 0 GAU35627.1 hypothetical protein TSUD_30450 [Trifolium subterraneum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27594_c0_g2_i1 24.63936885 34.76908047 14.50965723 0.417314954 -1.260791475 0.020077108 0.068042418 Down 2.793937 3.366844 1.919747 0.6612464 0.988158 1.010046 XP_012855841.1 PREDICTED: carbon catabolite repressor protein 4 homolog 6 [Erythranthe guttata] Q8VYU4|CCR4F_ARATH Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CCR4-6 PE=2 SV=2 -- -- -- -- -- -- KOG2338 Transcriptional effector CCR4-related protein [K] INFORMATION STORAGE AND PROCESSING Transcription A COG5239 "Ccr4-NOT transcription complex, subunit" Molecular Function: RNA binding (GO:0003723);|Molecular Function: poly(A)-specific ribonuclease activity (GO:0004535);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN27597_c1_g6_i1 170.0662275 334.1767341 5.955720915 0.017822069 -5.810191333 9.08E-83 1.94E-80 Down 26.85075 30.96696 27.92103 0.640832 0.1966918 0.3982187 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27600_c0_g1_i1 26.38044897 52.76089794 0 0 #NAME? 3.27E-17 8.93E-16 Down 2.345352 3.531274 3.360146 0 0 3.05E-37 XP_011074469.1 inactive protein kinase SELMODRAFT_444075 isoform X2 [Sesamum indicum] Q9M3D8|LRK13_ARATH L-type lectin-domain containing receptor kinase I.3 OS=Arabidopsis thaliana OX=3702 GN=LECRK13 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN27600_c1_g1_i2 27.03424946 42.61104745 11.45745147 0.26888453 -1.894941341 0.000276615 0.001664419 Down 3.260453 5.898824 4.37449 1.11648 1.089633 0.6599009 XP_019179403.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Ipomoea nil] Q8W034|RNP1_ARATH Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1 aip:107638705 K14411 MSI RNA-binding protein Musashi ko03015 mRNA surveillance pathway KOG4205 "RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1" [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification S ENOG410YA8Z Rna-binding protein Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA binding (GO:0003729);|Cellular Component: nucleus (GO:0005634);|Cellular Component: spliceosomal complex (GO:0005681);|Cellular Component: cytosol (GO:0005829);|Biological Process: mRNA processing (GO:0006397);|Biological Process: RNA splicing (GO:0008380);|Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);|Biological Process: mRNA transport (GO:0051028);|Biological Process: regulation of response to salt stress (GO:1901000);|Cellular Component: ribonucleoprotein complex (GO:1990904);|Biological Process: regulation of response to water deprivation (GO:2000070); -- -- TRINITY_DN27600_c2_g1_i1 3.462149564 6.924299128 0 0 #NAME? 0.009409963 0.036235703 Down 1.500903 1.47911 1.61871 0 0 0 AMQ46231.1 WRKY7 transcription factor [Panax ginseng] Q9C983|WRK57_ARATH Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410ZKP8 Transcription factor Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to salt stress (GO:0009651);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212); -- -- TRINITY_DN27600_c2_g2_i2 15.59450816 30.03165128 1.15736504 0.038538175 -4.697567927 1.30E-05 0.0001033 Down 1.119153 3.277595 2.098895 2.22E-64 1.68E-79 0.2207029 PHU16831.1 Heterogeneous nuclear ribonucleoprotein 1 [Capsicum chinense] -- -- adu:107482921 K14411 MSI RNA-binding protein Musashi ko03015 mRNA surveillance pathway KOG4205 "RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1" [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification S ENOG410YA8Z Rna-binding protein -- -- -- TRINITY_DN27600_c2_g3_i1 2.886058807 5.772117613 0 0 #NAME? 0.039662028 0.117802684 Down 0.4315888 1.717047 0.3326283 0 0 0 XP_012846599.1 "PREDICTED: probable WRKY transcription factor 48, partial [Erythranthe guttata]" Q9FGZ4|WRK48_ARATH Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to chitin (GO:0010200);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);" -- -- TRINITY_DN27604_c0_g4_i1 9.451049677 15.91000503 2.992094329 0.188063695 -2.410706728 0.008916061 0.03461866 Down 2.611473 2.036313 3.205555 2.90E-82 0.5376639 0.5583336 ALM25795.1 cytochrome P450 76A35-like protein [Salvia pomifera] P37121|C76A1_SOLME Cytochrome P450 76A1 (Fragment) OS=Solanum melongena OX=4111 GN=CYP76A1 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" -- -- TRINITY_DN27617_c0_g1_i1 47.24460226 63.68802962 30.80117491 0.48362581 -1.048036855 0.012155995 0.044795997 Down 11.45589 10.78667 7.686358 4.686277 1.19445 5.813775 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27617_c1_g3_i1 7.807258022 0.870218398 14.74429765 16.94321527 4.082635772 0.016850573 0.058702845 Up 4.59E-37 0.2389824 0.08126368 3.814275 1.3316 0.8406169 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2761_c0_g1_i1 4.200266701 8.400533402 0 0 #NAME? 0.00298901 0.013608842 Down 1.104188 1.094847 1.996026 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27622_c1_g1_i2 203.3725042 347.5982186 59.14678974 0.170158495 -2.555048917 9.40E-37 6.68E-35 Down 11.32982 11.42055 10.97081 1.515613 1.479208 1.645197 XP_011092645.1 "probable carotenoid cleavage dioxygenase 4, chloroplastic [Sesamum indicum]" O49675|CCD4_ARATH "Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCD4 PE=1 SV=1" sind:105172767 K09840 NCED 9-cis-epoxycarotenoid dioxygenase ko00906 Carotenoid biosynthesis KOG1285 "Beta, beta-carotene 15,15'-dioxygenase and related enzymes" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG3670 dioxygenase Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: plastoglobule (GO:0010287);|Molecular Function: carotenoid dioxygenase activity (GO:0010436);|Biological Process: carotene catabolic process (GO:0016121);|Molecular Function: 9-cis-epoxycarotenoid dioxygenase activity (GO:0045549);|Molecular Function: metal ion binding (GO:0046872); PF03055.14 Retinal pigment epithelial membrane protein TRINITY_DN27627_c1_g2_i1 15.87954905 28.45151544 3.307582659 0.116253303 -3.104656382 2.83E-05 0.000210451 Down 4.032841 3.243369 5.821719 1.28326 0 2.17E-53 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2762_c0_g1_i1 17.38877895 34.77755789 0 0 #NAME? 1.49E-11 2.59E-10 Down 3.995381 2.092503 3.750877 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27637_c0_g1_i9 49.76965399 81.65704203 17.88226596 0.218992331 -2.191047748 1.37E-08 1.70E-07 Down 4.193858 4.141695 4.795162 0.4390212 0.9391698 0.9783456 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27637_c1_g1_i1 401.1850835 236.2452258 566.1249412 2.396344473 1.260835309 1.85E-06 1.69E-05 Up 36.31728 39.54774 27.89641 76.9863 71.66622 51.69687 ABR92331.1 putative aldo/keto reductase 1 [Salvia miltiorrhiza] P40691|A115_TOBAC Auxin-induced protein PCNT115 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG1575 "Voltage-gated shaker-like K+ channel, subunit beta/KCNAB" [C] METABOLISM Energy production and conversion C COG0667 Aldo keto reductase Biological Process: auxin-activated signaling pathway (GO:0009734);|Molecular Function: oxidoreductase activity (GO:0016491); -- -- TRINITY_DN27637_c1_g6_i1 244.0312677 129.7227924 358.3397429 2.762349902 1.465896075 1.11E-17 3.14E-16 Up 12.35983 12.36523 11.74026 28.066 29.44601 23.61722 ABR92331.1 putative aldo/keto reductase 1 [Salvia miltiorrhiza] P40691|A115_TOBAC Auxin-induced protein PCNT115 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG1575 "Voltage-gated shaker-like K+ channel, subunit beta/KCNAB" [C] METABOLISM Energy production and conversion C COG0667 Aldo keto reductase Biological Process: auxin-activated signaling pathway (GO:0009734);|Molecular Function: oxidoreductase activity (GO:0016491); -- -- TRINITY_DN2763_c0_g1_i1 3.027040365 6.054080731 0 0 #NAME? 0.017695819 0.061187259 Down 1.299045 0.8428852 1.341197 0 0 0 BAG72946.1 "basic transcription factor 3, partial [synthetic construct]" A4RC23|NACB_MAGO7 Nascent polypeptide-associated complex subunit beta OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=EGD1 PE=3 SV=2 -- -- -- -- -- -- KOG2240 RNA polymerase II general transcription factor BTF3 and related proteins [K] INFORMATION STORAGE AND PROCESSING Transcription K ENOG4111JBG "Component of the nascent polypeptide-associated complex (NAC), a dynamic component of the ribosomal exit tunnel, protecting the emerging polypeptides from interaction with other cytoplasmic proteins to ensure appropriate nascent protein targeting (By similarity). The NAC complex also promotes mitochondrial protein import by enhancing productive ribosome interactions with the outer mitochondrial membrane and blocks the inappropriate interaction of ribosomes translating non-secretory nascent polypeptides with translocation sites in the membrane of the endoplasmic reticulum (By similarity). EGD1 may act as a transcription factor that exert a negative effect on the expression of several genes that are transcribed by RNA polymerase II (By similarity)" Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Cellular Component: nascent polypeptide-associated complex (GO:0005854);|Biological Process: protein transport (GO:0015031);|Molecular Function: unfolded protein binding (GO:0051082);|Biological Process: 'de novo' cotranslational protein folding (GO:0051083); -- -- TRINITY_DN27644_c2_g2_i1 24.50504192 34.58445047 14.42563337 0.417113274 -1.26148887 0.020499494 0.069133251 Down 5.19554 5.659831 3.840537 0.3901135 2.979424 1.564604 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27645_c0_g1_i22 839.1046171 431.8520956 1246.357139 2.886074078 1.529108331 3.70E-49 3.92E-47 Up 18.94249 14.12865 18.20447 38.8103 38.83249 41.89651 XP_011078509.1 berberine bridge enzyme-like 18 [Sesamum indicum] A6P6V9|CBDAS_CANSA Cannabidiolic acid synthase OS=Cannabis sativa OX=3483 GN=CBDAS PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: apoplast (GO:0048046);|Molecular Function: FAD binding (GO:0071949);|Molecular Function: cannabidiolate synthase activity (GO:0102779); "PF01565.22,PF08031.11" FAD binding domain|Berberine and berberine like TRINITY_DN27645_c0_g2_i1 4.257398867 8.129009387 0.385788347 0.047458224 -4.397198084 0.012186757 0.044894778 Down 1.875172 0.4534366 2.193307 4.82E-53 9.24E-39 0.2636224 XP_020554200.1 berberine bridge enzyme-like 28 [Sesamum indicum] A6P6V9|CBDAS_CANSA Cannabidiolic acid synthase OS=Cannabis sativa OX=3483 GN=CBDAS PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: apoplast (GO:0048046);|Molecular Function: FAD binding (GO:0071949);|Molecular Function: cannabidiolate synthase activity (GO:0102779); PF08031.11 Berberine and berberine like TRINITY_DN27647_c0_g1_i1 109.5930763 156.5393314 62.64682122 0.4001986 -1.321211976 1.73E-07 1.85E-06 Down 3.366164 3.699482 3.291491 1.365514 1.032481 0.938353 PIN08559.1 DNA topoisomerase type II [Handroanthus impetiginosus] P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana OX=3702 GN=TOP2 PE=2 SV=2 -- -- -- -- -- -- KOG0355 DNA topoisomerase type II [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics L COG0188 "DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings (By similarity)" Biological Process: resolution of meiotic recombination intermediates (GO:0000712);|Biological Process: sister chromatid segregation (GO:0000819);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA topoisomerase activity (GO:0003916);|Molecular Function: DNA topoisomerase type II (ATP-hydrolyzing) activity (GO:0003918);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA topological change (GO:0006265);|Biological Process: mitotic DNA integrity checkpoint (GO:0044774);|Molecular Function: metal ion binding (GO:0046872); "PF00521.19,PF16898.4,PF00204.24,PF02518.25,PF01751.21" "DNA gyrase/topoisomerase IV, subunit A|C-terminal associated domain of TOPRIM|DNA gyrase B|Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase|Toprim domain" TRINITY_DN27649_c0_g1_i1 13.19915166 3.835087731 22.56321559 5.883363608 2.556641202 0.000823578 0.00439923 Up 1.501159 0 0.7854904 4.635794 3.607576 2.697386 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27657_c1_g3_i1 7.684474718 12.35575931 3.013190124 0.24386928 -2.035820062 0.043848006 0.12765473 Down 3.719032 0.7285554 2.918115 0.6724798 0 0.6950656 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27657_c1_g8_i1 16.63896237 24.65051246 8.627412282 0.349989165 -1.514617834 0.024078674 0.078769332 Down 3.983722 3.341029 1.96069 0.7898796 0.5344051 1.367406 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27660_c0_g5_i1 29.62207045 50.79142966 8.45271124 0.16642003 -2.587099012 0.006801887 0.027570144 Down 4.903773 12.67575 6.380002 3.248075 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27671_c0_g1_i12 74.99277967 141.8012302 8.184329132 0.057716912 -4.114862075 4.46E-28 2.29E-26 Down 8.052763 8.178813 7.328262 0.6642793 0.1095129 0.3319092 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27676_c0_g1_i1 2298.269692 1400.24633 3196.293054 2.282664832 1.190719042 3.93E-57 5.19E-55 Up 51.30279 54.83203 51.52582 96.92287 94.85994 98.58289 PIN18531.1 NADH-dehydrogenase (ubiquinone) [Handroanthus impetiginosus] A1A653|FER8_USTMA Fe-regulated protein 8 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=fer8 PE=2 SV=1 -- -- -- -- -- -- KOG2495 NADH-dehydrogenase (ubiquinone) [C] METABOLISM Energy production and conversion S COG0446 pyridine nucleotide-disulfide oxidoreductase Molecular Function: electron-transferring-flavoprotein dehydrogenase activity (GO:0004174);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: pathogenesis (GO:0009405);|Molecular Function: flavin adenine dinucleotide binding (GO:0050660); "PF07992.13,PF00070.26,PF13738.5,PF13454.5,PF13434.5,PF05834.11,PF01266.23,PF03486.13" Pyridine nucleotide-disulphide oxidoreductase|Pyridine nucleotide-disulphide oxidoreductase|Pyridine nucleotide-disulphide oxidoreductase|FAD-NAD(P)-binding|L-lysine 6-monooxygenase (NADPH-requiring)|Lycopene cyclase protein|FAD dependent oxidoreductase|HI0933-like protein TRINITY_DN27676_c0_g2_i1 31.44992432 17.4777749 45.42207373 2.598847622 1.377872047 0.003927215 0.017207342 Up 1.223305 1.636365 2.139515 4.155973 2.516519 3.642339 XP_021901496.1 apoptosis-inducing factor 2-like isoform X1 [Carica papaya] -- -- -- -- -- -- -- -- KOG2495 NADH-dehydrogenase (ubiquinone) [C] METABOLISM Energy production and conversion -- -- -- -- -- -- TRINITY_DN2767_c0_g1_i1 10.95055896 21.90111791 0 0 #NAME? 1.74E-07 1.85E-06 Down 2.550373 3.940319 3.451239 0 0 3.16E-73 XP_008360498.1 PREDICTED: protein SMAX1-LIKE 4-like [Malus domestica] Q9LU73|SMXL5_ARATH Protein SMAX1-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SMXL5 PE=2 SV=1 -- -- -- -- -- -- KOG1051 Chaperone HSP104 and related ATP-dependent Clp proteases [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0542 ATP-dependent CLP protease ATP-binding subunit Biological Process: phloem transport (GO:0010233);|Biological Process: protein metabolic process (GO:0019538);|Biological Process: carbohydrate homeostasis (GO:0033500); -- -- TRINITY_DN27686_c0_g1_i1 3.572987152 7.145974305 0 0 #NAME? 0.020219774 0.068382908 Down 0.4059237 0.5851815 2.441952 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27686_c0_g3_i10 168.3568655 245.7898135 90.92391743 0.369925491 -1.434693377 3.92E-12 7.20E-11 Down 5.781382 5.185191 4.866156 1.248774 1.586419 1.885631 CAN69232.1 hypothetical protein VITISV_008804 [Vitis vinifera] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN276_c0_g1_i1 4.119914782 8.239829563 0 0 #NAME? 0.011647062 0.043211696 Down 0 2.448042 2.525321 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27702_c0_g1_i1 5.553901744 11.10780349 0 0 #NAME? 0.000555743 0.003102931 Down 3.190951 3.133399 0.8564175 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27707_c0_g2_i2 34.94660343 49.33607359 20.55713327 0.416675503 -1.263003811 0.004305406 0.018659087 Down 2.303521 2.969275 2.279273 1.006771 0.479699 1.070459 XP_020547897.1 LOW QUALITY PROTEIN: kinesin-like protein KIN-4C [Sesamum indicum] F4K0J3|KN4C_ARATH Kinesin-like protein KIN-4C OS=Arabidopsis thaliana OX=3702 GN=KIN4C PE=2 SV=2 sind:105172000 K10395 KIF4_21_27 kinesin family member 4/21/27 -- -- KOG0244 Kinesin-like protein [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5059 Kinesin family member Molecular Function: microtubule motor activity (GO:0003777);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: kinesin complex (GO:0005871);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based movement (GO:0007018);|Biological Process: mitotic spindle organization (GO:0007052);|Molecular Function: microtubule binding (GO:0008017);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: ATPase activity (GO:0016887);|Biological Process: cell wall organization (GO:0071555); "PF00225.22,PF16796.4" Kinesin motor domain|Microtubule binding TRINITY_DN27709_c0_g1_i9 163.7895499 233.1709728 94.40812707 0.404887992 -1.304405236 3.83E-10 5.72E-09 Down 5.468892 5.257331 4.956198 1.578435 1.766333 1.797421 XP_011092074.1 formin-like protein 11 [Sesamum indicum] Q9MA60|FH11_ARATH Formin-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=FH11 PE=2 SV=1 -- -- -- -- -- -- KOG1922 Rho GTPase effector BNI1 and related formins [TZ] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms |Cytoskeleton S ENOG410YCMB Formin-like protein Molecular Function: actin binding (GO:0003779);|Cellular Component: integral component of membrane (GO:0016021); PF02181.22 Formin Homology 2 Domain TRINITY_DN27713_c0_g2_i1 8.147791647 2.838530762 13.45705253 4.740851398 2.245146172 0.033015737 0.101909653 Up 0 0.3248636 1.039633 1.801984 1.293853 2.33722 PIN03543.1 Cytochrome P450 CYP2 subfamily [Handroanthus impetiginosus] O23976|C76B1_HELTU 7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus OX=4233 GN=CYP76B1 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" -- -- TRINITY_DN27714_c0_g1_i1 34.50381305 59.41127367 9.596352432 0.161524099 -2.63017867 1.27E-05 0.000101194 Down 6.318 10.4463 13.88347 1.124961 2.008791 1.02126 PIM98574.1 "hypothetical protein CDL12_28942, partial [Handroanthus impetiginosus]" Q9FF29|PR5K_ARATH PR5-like receptor kinase OS=Arabidopsis thaliana OX=3702 GN=PR5K PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111GDH thaumatin-like protein Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to fungus (GO:0009620);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN27716_c0_g1_i4 1362.818304 626.6742403 2098.962367 3.349367554 1.743888704 2.70E-87 5.95E-85 Up 20.47709 20.62793 19.01578 53.50345 54.98562 54.05089 XP_011074134.2 laccase-15-like [Sesamum indicum] Q9FY79|LAC14_ARATH Laccase-14 OS=Arabidopsis thaliana OX=3702 GN=LAC14 PE=2 SV=1 sind:105158918 K05909 E1.10.3.2 laccase -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase "Molecular Function: copper ion binding (GO:0005507);|Molecular Function: oxidoreductase activity, oxidizing metal ions (GO:0016722);|Biological Process: lignin catabolic process (GO:0046274);|Cellular Component: apoplast (GO:0048046);|Molecular Function: hydroquinone:oxygen oxidoreductase activity (GO:0052716);" "PF07732.14,PF07731.13,PF00394.21" Multicopper oxidase|Multicopper oxidase|Multicopper oxidase TRINITY_DN27716_c0_g2_i1 14.93309525 0.817689654 29.04850084 35.52509279 5.150766513 2.50E-08 3.00E-07 Up 0.06246917 0.000178492 0.107043 1.884033 1.312173 1.810347 XP_011074134.2 laccase-15-like [Sesamum indicum] Q9FY79|LAC14_ARATH Laccase-14 OS=Arabidopsis thaliana OX=3702 GN=LAC14 PE=2 SV=1 sind:105158918 K05909 E1.10.3.2 laccase -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase "Molecular Function: copper ion binding (GO:0005507);|Molecular Function: oxidoreductase activity, oxidizing metal ions (GO:0016722);|Biological Process: lignin catabolic process (GO:0046274);|Cellular Component: apoplast (GO:0048046);|Molecular Function: hydroquinone:oxygen oxidoreductase activity (GO:0052716);" "PF07731.13,PF00394.21" Multicopper oxidase|Multicopper oxidase TRINITY_DN27718_c0_g1_i1 12.31101666 6.484749781 18.13728353 2.796913396 1.483835583 0.04712641 0.13516201 Up 0.8833538 1.141087 0.6699928 1.388527 2.893155 1.922044 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27718_c1_g1_i2 73.12693919 106.0163082 40.23757019 0.379541326 -1.397671114 4.96E-06 4.23E-05 Down 8.590212 8.043524 8.531949 2.294493 2.432862 2.977947 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27718_c1_g2_i1 97.9997283 191.172633 4.826823618 0.025248507 -5.307658092 1.17E-43 1.06E-41 Down 20.62701 27.04568 28.15665 1.81E-97 0.8651003 0.6085111 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27718_c1_g3_i1 12.6070005 25.21400099 0 0 #NAME? 1.50E-08 1.86E-07 Down 3.338691 2.071591 3.457498 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27718_c1_g4_i2 169.9016378 246.3555094 93.44776617 0.379320789 -1.398509654 8.95E-12 1.59E-10 Down 26.53086 28.74242 27.71498 7.035089 10.24349 8.149338 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27718_c1_g5_i1 46.16355033 91.95959147 0.367509184 0.00399642 -7.967075942 1.00E-22 3.85E-21 Down 7.484486 4.485548 6.001234 0.06091037 1.74E-22 5.79E-46 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27718_c1_g7_i1 36.39184014 72.78368029 0 0 #NAME? 4.26E-16 1.07E-14 Down 8.920131 17.5799 13.11921 2.63E-27 0.02556277 0.03457681 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27719_c1_g2_i1 15.24624085 30.49248171 0 0 #NAME? 3.65E-10 5.46E-09 Down 5.585906 7.487841 6.104523 1.14E-38 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27719_c1_g3_i3 291.870145 435.5080195 148.2322706 0.34036634 -1.554839725 2.34E-22 8.78E-21 Down 13.45583 15.29893 16.22061 3.954423 4.233733 4.182665 XP_021642931.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Hevea brasiliensis] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); "PF14372.5,PF05699.13" Domain of unknown function (DUF4413)|hAT family C-terminal dimerisation region TRINITY_DN27724_c0_g3_i1 79.38305923 158.7661185 0 0 #NAME? 1.19E-49 1.28E-47 Down 29.39454 24.08431 26.12876 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27724_c0_g4_i1 34.44726661 57.3298641 11.56466912 0.201721551 -2.30956287 8.83E-07 8.55E-06 Down 4.20781 6.602315 5.263962 0.8246169 0.6968915 1.079993 XP_008438567.1 PREDICTED: MATH domain-containing protein At5g43560 isoform X3 [Cucumis melo] Q8RY18|TRF1A_ARATH TNF receptor-associated factor homolog 1a OS=Arabidopsis thaliana OX=3702 GN=TRAF1A PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZKXJ math domain-containing protein Cellular Component: cytoplasm (GO:0005737);|Molecular Function: protein histidine kinase binding (GO:0043424);|Biological Process: innate immune response (GO:0045087);|Biological Process: autophagosome organization (GO:1905037); -- -- TRINITY_DN27732_c0_g2_i1 25.6988821 35.70718882 15.69057538 0.43942343 -1.186316299 0.0169254 0.058927341 Down 2.571411 3.150234 4.629715 0.8252991 1.182277 1.622108 XP_011072084.2 uncharacterized protein LOC105157371 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZJRH BRO1-like domain -- -- -- TRINITY_DN27736_c0_g1_i1 27.10335449 39.88141 14.32529899 0.359197405 -1.477151167 0.002615092 0.012138959 Down 5.53663 4.909857 7.995139 1.091737 1.124177 3.247856 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27737_c0_g1_i3 109.1900342 150.1953175 68.18475078 0.453973878 -1.139318808 7.74E-06 6.40E-05 Down 11.69753 9.261259 8.549257 3.621304 4.008544 3.19474 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27737_c1_g1_i1 42.90414592 25.59678289 60.21150895 2.352307679 1.234076776 0.001578864 0.0078199 Up 1.622136 1.486066 1.480168 3.427579 3.287796 1.971679 XP_020552427.1 calcium-dependent protein kinase 8 [Sesamum indicum] Q38873|CDPK7_ARATH Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CPK7 PE=2 SV=1 sind:105170806 K13412 CPK calcium-dependent protein kinase ko04626 Plant-pathogen interaction KOG0032 "Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily" [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XRMJ calcium-dependent protein kinase Molecular Function: calmodulin-dependent protein kinase activity (GO:0004683);|Molecular Function: calcium ion binding (GO:0005509);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Molecular Function: calcium-dependent protein serine/threonine kinase activity (GO:0009931);|Biological Process: peptidyl-serine phosphorylation (GO:0018105);|Biological Process: intracellular signal transduction (GO:0035556); -- -- TRINITY_DN2773_c0_g1_i1 3.183864605 6.367729211 0 0 #NAME? 0.027737036 0.088473562 Down 2.48145 0 1.56387 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27741_c0_g3_i1 12.24671667 23.3360683 1.15736504 0.049595546 -4.333645638 0.005872674 0.024327275 Down 1.902723 5.163756 1.183073 0 0 0.3798 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27742_c0_g1_i5 168.9695296 84.89699069 253.0420684 2.980577596 1.575591933 1.54E-14 3.43E-13 Up 2.170963 1.273202 1.846863 3.867759 4.500371 4.405929 XP_012844644.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Erythranthe guttata] Q6JN47|EIX1_SOLLC Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF13855.5,PF12799.6,PF00560.32,PF08263.11,PF13516.5" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine rich repeat N-terminal domain|Leucine Rich repeat TRINITY_DN27743_c0_g1_i1 17.34689458 27.04993158 7.643857588 0.28258325 -1.82325214 0.043794555 0.127540016 Down 8.626058 4.64688 2.953506 1.188663 2.365942 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27755_c1_g4_i1 28.76474915 49.35607638 8.173421917 0.165601128 -2.594215596 6.14E-07 6.09E-06 Down 2.78789 3.862844 4.99898 0.2200726 0.7586271 0.5723146 PIN11947.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9LP77|Y1848_ARATH Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111IV8 receptor kinase -- -- -- TRINITY_DN27756_c1_g1_i2 120.6314116 230.7746713 10.488152 0.045447587 -4.459652485 8.43E-48 8.60E-46 Down 7.108025 6.594443 6.507468 0.08712197 0.2895637 0.3753301 AAS86319.1 gamma-curcumene synthase [Pogostemon cablin] Q49SP7|TPSCS_POGCB Gamma-curcumene synthase OS=Pogostemon cablin OX=28511 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: cytosol (GO:0005829);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate metabolic process (GO:0045338);|Biological Process: sesquiterpene biosynthetic process (GO:0051762);|Molecular Function: gamma-curcumene synthase activity (GO:0102064); "PF03936.15,PF01397.20" "Terpene synthase family, metal binding domain|Terpene synthase, N-terminal domain" TRINITY_DN27775_c0_g2_i2 45.8592519 20.55502321 71.16348058 3.462096824 1.791646073 6.39E-06 5.36E-05 Up 0.4115504 0.5007018 0.7227359 1.327563 1.87828 1.437773 EYU38890.1 hypothetical protein MIMGU_mgv1a001796mg [Erythranthe guttata] O82146|BAMS2_PANGI Beta-Amyrin Synthase 2 OS=Panax ginseng OX=4054 GN=OSCPNY2 PE=2 SV=1 sind:105173656 K15813 LUP4 beta-amyrin synthase ko00909 Sesquiterpenoid and triterpenoid biosynthesis KOG0497 Oxidosqualene-lanosterol cyclase and related proteins [I] METABOLISM Lipid transport and metabolism I COG1657 Squalene--hopene cyclase Molecular Function: intramolecular transferase activity (GO:0016866); "PF13243.5,PF13249.5,PF00432.20,PF09492.9" Squalene-hopene cyclase C-terminal domain|Squalene-hopene cyclase N-terminal domain|Prenyltransferase and squalene oxidase repeat|Pectic acid lyase TRINITY_DN27775_c1_g3_i1 16.61694724 28.83433216 4.399562314 0.152580691 -2.712355697 0.024625736 0.080223629 Down 5.466365 0.7019714 5.288007 1.128566 0.2274784 8.97E-64 XP_011087662.1 chromatin structure-remodeling complex protein BSH [Sesamum indicum] P93045|BSH_ARATH Chromatin structure-remodeling complex protein BSH OS=Arabidopsis thaliana OX=3702 GN=BSH PE=1 SV=2 sind:105169081 K11648 "SMARCB1, SNF5, INI1" SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 -- -- KOG1649 "SWI-SNF chromatin remodeling complex, Snf5 subunit" [BK] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics |Transcription K ENOG410XSZD SWI SNF related matrix associated actin dependent regulator of chromatin subfamily B member 1 Cellular Component: nucleus (GO:0005634);|Biological Process: nucleosome disassembly (GO:0006337);|Biological Process: regulation of transcription by RNA polymerase II (GO:0006357);|Biological Process: cell cycle (GO:0007049);|Cellular Component: SWI/SNF complex (GO:0016514);|Biological Process: ATP-dependent chromatin remodeling (GO:0043044); -- -- TRINITY_DN27777_c2_g1_i2 33.61342284 20.33178923 46.89505646 2.306489405 1.205698665 0.013240412 0.048170396 Up 2.150312 4.148226 2.826381 4.689095 8.105735 4.269406 PIN04199.1 Serine/threonine protein kinase [Handroanthus impetiginosus] O23081|CRK41_ARATH Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana OX=3702 GN=CRK41 PE=3 SV=2 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN27783_c0_g2_i3 96.28144032 131.1476191 61.41526158 0.468291091 -1.094522504 3.79E-05 0.000275249 Down 2.84882 2.950327 3.079295 0.9298139 1.477588 0.9436566 XP_011075808.1 DNA (cytosine-5)-methyltransferase CMT2 isoform X2 [Sesamum indicum] Q94F87|CMT2_ARATH DNA (cytosine-5)-methyltransferase CMT2 OS=Arabidopsis thaliana OX=3702 GN=CMT2 PE=2 SV=3 sind:105160225 K00558 "DNMT1, dcm" DNA (cytosine-5)-methyltransferase 1 ko00270 Cysteine and methionine metabolism -- -- -- -- -- L COG0270 Cytosine-specific methyltransferase Molecular Function: DNA binding (GO:0003677);|Molecular Function: chromatin binding (GO:0003682);|Molecular Function: DNA (cytosine-5-)-methyltransferase activity (GO:0003886);|Cellular Component: nucleus (GO:0005634);|Biological Process: chromatin organization (GO:0006325);|Biological Process: maintenance of DNA methylation (GO:0010216);|Biological Process: DNA methylation on cytosine within a CG sequence (GO:0010424);|Biological Process: DNA methylation on cytosine within a CHH sequence (GO:0010426);|Biological Process: cellular response to heat (GO:0034605); "PF00145.16,PF01426.17,PF00385.23" C-5 cytosine-specific DNA methylase|BAH domain|Chromo (CHRromatin Organisation MOdifier) domain TRINITY_DN27807_c0_g2_i2 26.48130392 43.70493753 9.257670308 0.211822069 -2.239075186 3.01E-05 0.00022274 Down 3.982361 3.816087 4.051955 0.5334849 0.8555295 0.5852279 XP_011079474.1 L-cysteine desulfhydrase [Sesamum indicum] Q9M1R1|LCYD1_ARATH L-cysteine desulfhydrase OS=Arabidopsis thaliana OX=3702 GN=LCD PE=2 SV=1 -- -- -- -- -- -- KOG1549 Cysteine desulfurase NFS1 [E] METABOLISM Amino acid transport and metabolism E COG0520 cysteine desulfurase Cellular Component: cytosol (GO:0005829);|Biological Process: L-cysteine catabolic process to pyruvate (GO:0019450);|Molecular Function: L-cysteine desulfhydrase activity (GO:0080146); -- -- TRINITY_DN27811_c0_g1_i2 1349.550499 2027.859554 671.2414445 0.331009829 -1.595054037 1.65E-72 2.94E-70 Down 67.71388 69.79902 66.3546 16.77558 16.80581 20.90948 CAN67819.1 hypothetical protein VITISV_041315 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YMEY NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF14223.5,PF03732.16" gag-polypeptide of LTR copia-type|Retrotransposon gag protein TRINITY_DN27811_c0_g2_i1 24.2183927 38.43882278 9.997962626 0.260100646 -1.942858114 0.00048283 0.002739639 Down 3.700256 4.363211 3.207744 0.8618695 0.8559251 0.6690408 XP_012840953.1 PREDICTED: UDP-glycosyltransferase 86A1-like [Erythranthe guttata] Q9SJL0|U86A1_ARATH UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana OX=3702 GN=UGT86A1 PE=2 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); -- -- TRINITY_DN27811_c0_g3_i2 33.84304625 53.17116132 14.51493118 0.272985032 -1.873106245 5.49E-05 0.000385351 Down 2.801223 3.120072 2.56457 0.5013875 0.6310375 0.7280498 KYP50444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN27817_c0_g4_i1 30.32630186 41.01891371 19.63369002 0.478649682 -1.062957943 0.023275182 0.07658342 Down 1.928021 3.038308 2.842505 1.117483 1.046069 0.8199974 XP_011087544.1 "glucan endo-1,3-beta-glucosidase 3 isoform X2 [Sesamum indicum]" O65399|E131_ARATH "Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3" -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y19Y NA "Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: defense response (GO:0006952);|Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);|Cellular Component: anchored component of plasma membrane (GO:0046658);" PF07983.12 X8 domain TRINITY_DN2781_c0_g1_i1 8.452282743 16.90456549 0 0 #NAME? 7.87E-06 6.50E-05 Down 0.8641883 2.787965 2.636259 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27821_c0_g1_i2 831.5844102 1160.986455 502.1823658 0.432547997 -1.209067866 1.22E-31 7.21E-30 Down 25.43023 25.02144 23.80077 7.97156 8.57293 9.382782 XP_011101763.1 ninja-family protein AFP1-like [Sesamum indicum] Q9LQ98|AFP1_ARATH Ninja-family protein AFP1 OS=Arabidopsis thaliana OX=3702 GN=AFP1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGKS ninja-family protein "Cellular Component: nucleus (GO:0005634);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);" "PF16136.4,PF07897.10,PF16135.4" Putative nuclear localisation signal|Ethylene-responsive binding factor-associated repression|TPL-binding domain in jasmonate signalling TRINITY_DN27822_c0_g2_i1 13.40961762 7.09696605 19.72226919 2.778971895 1.474551244 0.03949376 0.117379707 Up 0.7930406 0.4421234 0.5100895 0.7086398 1.63088 1.579552 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27825_c0_g4_i1 14.96706731 25.93899912 3.995135488 0.154020418 -2.698806477 0.000376476 0.002192914 Down 3.003018 4.384161 2.711968 0.2684388 0.9713804 0.006355869 XP_011087837.1 "15-cis-phytoene desaturase, chloroplastic/chromoplastic [Sesamum indicum]" -- -- -- -- -- -- -- -- -- -- -- -- -- Q COG1233 phytoene -- -- -- TRINITY_DN27829_c1_g5_i1 214.4599471 131.0842135 297.8356807 2.272094196 1.184022647 8.36E-11 1.34E-09 Up 20.88313 28.43136 26.59702 51.93012 40.0639 47.18963 XP_012840309.1 PREDICTED: protein SRG1 [Erythranthe guttata] D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum OX=3469 GN=DIOX2 PE=2 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Molecular Function: transferase activity (GO:0016740);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213); -- -- TRINITY_DN27838_c0_g1_i1 10.40782809 16.10659811 4.709058062 0.29236826 -1.774141397 0.041097753 0.121249858 Down 2.124154 4.16055 3.445684 0 2.226452 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27838_c1_g2_i10 66.60535842 94.77256762 38.43814922 0.405583073 -1.301930652 5.87E-05 0.000409076 Down 3.809661 4.845384 3.845487 1.48882 1.621282 0.9796488 EPS61931.1 "hypothetical protein M569_12862, partial [Genlisea aurea]" Q9LRZ3|PUM24_ARATH Pumilio homolog 24 OS=Arabidopsis thaliana OX=3702 GN=APUM24 PE=1 SV=1 sind:105156863 K14844 PUF6 pumilio homology domain family member 6 -- -- -- -- -- -- -- S ENOG410XSHY Domain-Containing protein Molecular Function: RNA binding (GO:0003723);|Cellular Component: nucleolus (GO:0005730);|Biological Process: regulation of translation (GO:0006417);|Biological Process: embryo development ending in seed dormancy (GO:0009793); -- -- TRINITY_DN2783_c0_g1_i1 21.1849506 29.72380031 12.64610088 0.425453702 -1.232925949 0.026987606 0.086520826 Down 2.596039 4.752262 5.115406 1.144654 1.533816 1.545631 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27849_c0_g1_i2 11199.93041 7430.713366 14969.14745 2.014496686 1.010419432 6.19E-68 1.01E-65 Up 183.5891 185.2648 187.4416 308.4823 304.6961 290.9503 XP_011093362.1 "LOW QUALITY PROTEIN: transketolase, chloroplastic [Sesamum indicum]" Q43848|TKTC_SOLTU "Transketolase, chloroplastic OS=Solanum tuberosum OX=4113 PE=2 SV=1" sind:105173355 K00615 "E2.2.1.1, tktA, tktB" transketolase ko00710|ko00030 Carbon fixation in photosynthetic organisms|Pentose phosphate pathway KOG0523 Transketolase [G] METABOLISM Carbohydrate transport and metabolism G COG0021 Transketolase Molecular Function: transketolase activity (GO:0004802);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: reductive pentose-phosphate cycle (GO:0019253);|Molecular Function: metal ion binding (GO:0046872); "PF00456.20,PF02779.23,PF02780.19" "Transketolase, thiamine diphosphate binding domain|Transketolase, pyrimidine binding domain|Transketolase, C-terminal domain" TRINITY_DN27870_c0_g2_i2 372.2847437 719.8279457 24.74154164 0.034371466 -4.862644811 4.69E-145 1.97E-142 Down 20.82623 20.67877 20.47081 0.4527758 0.8250578 0.444969 PIN02149.1 Cytochrome P450 CYP4/CYP19/CYP26 subfamily [Handroanthus impetiginosus] H2DH21|C7A29_PANGI Cytochrome P450 CYP72A219 OS=Panax ginseng OX=4054 PE=2 SV=1 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN27871_c0_g1_i1 280.3896988 185.0739051 375.7054925 2.03002953 1.021500714 1.08E-10 1.72E-09 Up 3.326499 4.181654 3.363941 5.89098 6.142102 5.775727 XP_011090652.1 "putative calcium-transporting ATPase 13, plasma membrane-type [Sesamum indicum]" Q9LIK7|ACA13_ARATH "Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA13 PE=3 SV=1" sind:105171288 K01537 E3.6.3.8 Ca2+-transporting ATPase -- -- KOG0204 Calcium transporting ATPase [P] METABOLISM Inorganic ion transport and metabolism P ENOG410XNNC "ATPase, Ca transporting, plasma membrane" Molecular Function: calcium-transporting ATPase activity (GO:0005388);|Molecular Function: calmodulin binding (GO:0005516);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of plasma membrane (GO:0005887);|Molecular Function: metal ion binding (GO:0046872); "PF00689.20,PF00122.19,PF00702.25,PF13246.5,PF00690.25" "Cation transporting ATPase, C-terminus|E1-E2 ATPase|haloacid dehalogenase-like hydrolase|Cation transport ATPase (P-type)|Cation transporter/ATPase, N-terminus" TRINITY_DN27883_c0_g1_i6 77.12735435 124.6949227 29.559786 0.237056853 -2.076694993 9.70E-08 1.07E-06 Down 2.327403 3.719883 2.546495 0.5399813 0.3635874 0.7402978 XP_022037372.1 uncharacterized protein LOC110940121 [Helianthus annuus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03078.14 ATHILA ORF-1 family TRINITY_DN27885_c1_g2_i1 32.36638722 20.76245828 43.97031616 2.117779868 1.082552637 0.016558652 0.057885784 Up 0.8568742 1.96279 1.10668 2.538649 1.703732 2.527333 XP_011095817.1 disease resistance protein RPM1-like [Sesamum indicum] Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana OX=3702 GN=RPM1 PE=1 SV=1 sind:105175167 K13457 "RPM1, RPS3" disease resistance protein RPM1 ko04626 Plant-pathogen interaction KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat -- PF00931.21 NB-ARC domain TRINITY_DN27893_c0_g1_i2 68.56502663 95.57677021 41.55328305 0.434763415 -1.20169755 0.000141648 0.000910098 Down 4.580728 3.991184 4.231224 1.536965 1.544204 1.419417 KMS98576.1 hypothetical protein BVRB_4g092630 [Beta vulgaris subsp. vulgaris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03078.14 ATHILA ORF-1 family TRINITY_DN27899_c0_g2_i1 55.82485586 75.48481963 36.16489209 0.479101524 -1.061596693 0.002352162 0.01106672 Down 8.921536 6.699948 8.445128 2.599886 4.423772 2.174999 XP_011082023.1 "uncharacterized protein At1g32220, chloroplastic isoform X2 [Sesamum indicum]" Q9FVR6|Y1222_ARATH "Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g32220 PE=1 SV=1" -- -- -- -- -- -- KOG4288 Predicted oxidoreductase [R] POORLY CHARACTERIZED General function prediction only GM COG0702 epimerase dehydratase Molecular Function: NADH dehydrogenase activity (GO:0003954);|Cellular Component: mitochondrial respiratory chain complex I (GO:0005747);|Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: thylakoid (GO:0009579);|Cellular Component: plastoglobule (GO:0010287);|Biological Process: ubiquinone-6 biosynthetic process (GO:1901006); -- -- TRINITY_DN27903_c1_g5_i1 28.07301602 56.14603205 0 0 #NAME? 3.04E-18 8.88E-17 Down 7.452965 6.941276 8.049189 9.34E-14 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27903_c2_g1_i1 18.83528691 0.325611563 37.34496226 114.691757 6.841617898 2.09E-12 3.93E-11 Up 0.1571191 0 0 4.593799 3.4093 5.820525 XP_012844364.1 PREDICTED: GDSL esterase/lipase At4g01130-like [Erythranthe guttata] Q9M153|GDL61_ARATH GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana OX=3702 GN=At4g01130 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y9BR GDSL esterase lipase "Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);" -- -- TRINITY_DN27906_c0_g2_i6 74.07024514 123.5439319 24.59655835 0.199091594 -2.328495785 4.36E-13 8.69E-12 Down 7.201251 7.404023 7.296013 1.010104 1.127817 1.39839 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27906_c0_g3_i1 19.28236366 30.67515003 7.88957728 0.257197675 -1.959050492 0.001278174 0.00648705 Down 4.945109 5.988702 7.519051 8.57E-18 1.504262 2.289044 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27906_c1_g2_i1 29.68387379 59.36774759 0 0 #NAME? 3.89E-19 1.20E-17 Down 9.335339 13.8982 9.599429 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27906_c1_g4_i1 13.19139359 26.38278718 0 0 #NAME? 6.47E-09 8.35E-08 Down 4.672613 3.770687 5.150876 0 0 9.56E-86 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27906_c2_g1_i1 5.301662305 10.60332461 0 0 #NAME? 0.000688962 0.003751685 Down 0.8866932 2.170842 1.013754 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27907_c2_g2_i1 25.36829147 38.00927483 12.72730811 0.334847433 -1.578424186 0.00248072 0.011588693 Down 1.972759 2.498551 2.448714 0.5768587 0.4348035 0.8524827 PSS36642.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein like [Actinidia chinensis var. chinensis] Q9FGI6|NDUS1_ARATH "NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=EMB1467 PE=1 SV=2" sind:105167753 K03934 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1 ko00190 Oxidative phosphorylation KOG2282 "NADH-ubiquinone oxidoreductase, NDUFS1/75 kDa subunit" [C] METABOLISM Energy production and conversion C COG1034 subunit g "Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial respiratory chain complex I (GO:0005747);|Biological Process: response to oxidative stress (GO:0006979);|Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137);|Molecular Function: electron transfer activity (GO:0009055);|Cellular Component: chloroplast (GO:0009507);|Biological Process: photorespiration (GO:0009853);|Cellular Component: mitochondrial membrane (GO:0031966);|Biological Process: ATP synthesis coupled electron transport (GO:0042773);|Cellular Component: respiratory chain complex I (GO:0045271);|Cellular Component: plasma membrane respiratory chain complex I (GO:0045272);|Biological Process: cellular respiration (GO:0045333);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);" -- -- TRINITY_DN27915_c0_g2_i1 13.31187347 26.62374693 0 0 #NAME? 5.48E-08 6.28E-07 Down 2.295147 3.327943 5.576991 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27924_c0_g1_i1 103.2522187 33.63045567 172.8739817 5.140399624 2.361880521 2.60E-05 0.000194288 Up 1.505065 0.832468 0.8028738 5.878388 4.293279 2.768291 PIN06199.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9S9M5|WAKLA_ARATH Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana OX=3702 GN=WAKL1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24,PF03936.15" "Protein tyrosine kinase|Protein kinase domain|Terpene synthase family, metal binding domain" TRINITY_DN27924_c0_g2_i1 244.9591371 151.8941561 338.0241182 2.225392516 1.154059822 1.23E-09 1.74E-08 Up 3.170248 4.028285 4.257098 5.762335 7.706623 7.095908 PIN06199.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9S9M5|WAKLA_ARATH Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana OX=3702 GN=WAKL1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16,PF13947.5,PF07645.14" Protein kinase domain|Protein tyrosine kinase|Wall-associated receptor kinase galacturonan-binding|Calcium-binding EGF domain TRINITY_DN27924_c0_g3_i1 53.99833536 3.084569808 104.9121009 34.01190683 5.087967986 2.13E-26 1.00E-24 Up 0 0.2593704 0.8090334 8.676462 9.698124 10.56954 AIS39009.1 terpene synthase 12 [Salvia miltiorrhiza] J7LQ09|TPS7_PHYDL Trans-alpha-bergamotene synthase OS=Phyla dulcis OX=542674 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate catabolic process (GO:0045339);|Biological Process: (-)-exo-alpha-bergamotene biosynthetic process (GO:1901940); PF03936.15 "Terpene synthase family, metal binding domain" TRINITY_DN27924_c1_g1_i1 6.615267 0.883740284 12.34679371 13.97106586 3.804370183 0.002244583 0.010625545 Up 0.1816523 0.1763136 0.1353846 1.61834 1.031134 2.152957 EYU27851.1 hypothetical protein MIMGU_mgv1a023119mg [Erythranthe guttata] J7LQ09|TPS7_PHYDL Trans-alpha-bergamotene synthase OS=Phyla dulcis OX=542674 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YF98 synthase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate catabolic process (GO:0045339);|Biological Process: (-)-exo-alpha-bergamotene biosynthetic process (GO:1901940); PF03936.15 "Terpene synthase family, metal binding domain" TRINITY_DN27929_c0_g1_i15 228.8545605 358.5395556 99.1695653 0.276593095 -1.854162955 4.02E-24 1.67E-22 Down 11.0804 11.15639 10.32054 2.162887 2.622559 2.453589 XP_016708410.1 PREDICTED: BAG family molecular chaperone regulator 1-like [Gossypium hirsutum] -- -- -- -- -- -- -- -- -- -- -- -- -- O ENOG4111WNH BCL-2-associated athanogene -- -- -- TRINITY_DN27938_c0_g2_i2 11.57685766 23.15371532 0 0 #NAME? 6.11E-08 6.95E-07 Down 2.262886 2.315323 3.4708 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27939_c0_g1_i3 22.00888213 43.2827459 0.735018369 0.016981787 -5.879867913 3.12E-06 2.76E-05 Down 8.439596 3.031879 10.08972 0.3320665 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27939_c0_g2_i3 654.8423649 879.2969933 430.3877365 0.489467995 -1.030713565 5.15E-20 1.68E-18 Down 28.9343 31.8585 28.11203 11.41632 11.1648 12.54789 XP_011077566.1 vacuolar cation/proton exchanger 3-like [Sesamum indicum] Q93Z81|CAX3_ARATH Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana OX=3702 GN=CAX3 PE=1 SV=1 sind:105161545 K07300 "chaA, CAX" Ca2+:H+ antiporter -- -- KOG1397 Ca2+/H+ antiporter VCX1 and related proteins [P] METABOLISM Inorganic ion transport and metabolism P COG0387 Calcium Proton Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: phosphorus metabolic process (GO:0006793);|Biological Process: cellular calcium ion homeostasis (GO:0006874);|Biological Process: cellular zinc ion homeostasis (GO:0006882);|Biological Process: response to nematode (GO:0009624);|Cellular Component: plant-type vacuole membrane (GO:0009705);|Molecular Function: calcium:proton antiporter activity (GO:0015369);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: cellular manganese ion homeostasis (GO:0030026);|Biological Process: response to calcium ion (GO:0051592);|Biological Process: phosphate ion homeostasis (GO:0055062);|Biological Process: calcium ion transmembrane transport (GO:0070588); PF01699.23 Sodium/calcium exchanger protein TRINITY_DN27939_c0_g3_i1 27.74217036 52.54426724 2.940073475 0.05595422 -4.159609255 3.07E-05 0.000226618 Down 7.719871 16.17548 7.035292 1.331638 1.98E-10 8.04E-49 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27939_c0_g4_i1 7.541130568 0 15.08226114 Inf Inf 0.000303957 0.001813078 Up 0.08762842 8.94E-06 0.02411301 1.446992 4.39381 1.415617 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2793_c0_g1_i1 17.52348657 29.49567905 5.551294089 0.188207028 -2.409607594 0.015024795 0.053428949 Down 10.11621 4.868177 3.327402 0 1.768977 0.8813461 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27941_c1_g3_i1 9.325530607 17.49369617 1.15736504 0.066158977 -3.917919266 0.000793654 0.004254912 Down 2.779303 2.031886 0.7465761 1.16E-43 3.49E-55 0.2676135 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27944_c0_g3_i2 37.45472807 50.54190495 24.3675512 0.482125698 -1.052518765 0.011038533 0.04128808 Down 2.210859 2.972077 2.950665 0.6130413 0.907689 1.634287 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27945_c0_g1_i2 35.72721244 48.04562524 23.40879963 0.48722021 -1.037354116 0.035242757 0.107389037 Down 6.550721 5.10751 6.124968 0.6101988 1.807431 4.579826 XP_019076853.1 PREDICTED: uncharacterized protein LOC100262883 isoform X2 [Vitis vinifera] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZBPB Polyketide cyclase / dehydrase and lipid transport -- -- -- TRINITY_DN27950_c0_g1_i5 748.9592163 446.3495355 1051.568897 2.355931425 1.236297547 3.52E-31 2.06E-29 Up 13.97266 14.27166 13.74876 26.30013 27.36102 26.11953 XP_011096037.1 WRKY transcription factor 6 [Sesamum indicum] Q9C519|WRKY6_ARATH WRKY transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=WRKY6 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YDVM Transcription factor "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: response to chitin (GO:0010200);|Biological Process: cellular response to phosphate starvation (GO:0016036);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Biological Process: cellular response to boron-containing substance deprivation (GO:0080169);" PF03106.14 WRKY DNA -binding domain TRINITY_DN27961_c0_g2_i1 16.74488121 27.87026631 5.619496106 0.201630513 -2.310214112 0.000857348 0.004554962 Down 5.079586 7.783549 3.161096 0.6215339 0.6282337 1.229551 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27965_c0_g3_i1 23.7125404 12.96906186 34.45601894 2.656785766 1.409681899 0.01025222 0.038853465 Up 0 4.873139 3.167808 6.068234 6.058097 4.790906 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27972_c0_g1_i1 307.5596483 598.3103719 16.80892478 0.028093989 -5.153594725 1.67E-129 5.99E-127 Down 54.51567 51.38171 50.7174 1.252323 0.8403539 1.510209 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27977_c0_g1_i1 81.04066896 111.5095803 50.57175763 0.453519397 -1.140763838 8.44E-05 0.000568386 Down 2.927979 2.767558 2.675832 1.028425 0.965566 1.059871 XP_020554196.1 uncharacterized protein LOC105175929 [Sesamum indicum] Q93YU8|NRG2_ARATH Nitrate regulatory gene2 protein OS=Arabidopsis thaliana OX=3702 GN=NRG2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YCDD Protein of unknown function (DUF630) Cellular Component: nucleus (GO:0005634);|Biological Process: response to nitrate (GO:0010167);|Biological Process: nitrate transport (GO:0015706);|Biological Process: cellular response to nitrate (GO:0071249);|Biological Process: nitrogen compound transport (GO:0071705);|Biological Process: response to nitrogen compound (GO:1901698); "PF04782.11,PF04783.11" Protein of unknown function (DUF632)|Protein of unknown function (DUF630) TRINITY_DN27980_c0_g2_i1 3.982812822 7.965625643 0 0 #NAME? 0.004644117 0.019910314 Down 0.6985322 2.06964 0.8969488 3.96E-52 9.74E-48 2.31E-47 XP_012838392.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62350-like [Erythranthe guttata] Q1PFH7|PPR89_ARATH Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX=3702 GN=At1g62350 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDVV Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN27981_c0_g2_i2 193.3985543 85.06806398 301.7290446 3.546913265 1.826564052 5.33E-21 1.87E-19 Up 1.874493 1.900831 1.739071 5.273023 4.874778 5.666837 PIN16864.1 Trehalose-6-phosphate synthase component TPS1 [Handroanthus impetiginosus] Q9LRA7|TPS9_ARATH "Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana OX=3702 GN=TPS9 PE=2 SV=1" sind:105168237 K16055 TPS trehalose 6-phosphate synthase/phosphatase ko00500 Starch and sucrose metabolism KOG1050 Trehalose-6-phosphate synthase component TPS1 and related subunits [G] METABOLISM Carbohydrate transport and metabolism G COG1877 trehalose biosynthetic process "Cellular Component: cytoplasm (GO:0005737);|Biological Process: trehalose biosynthetic process (GO:0005992);|Biological Process: dephosphorylation (GO:0016311);|Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);|Biological Process: trehalose metabolism in response to stress (GO:0070413);" "PF00982.20,PF02358.15,PF08282.11" Glycosyltransferase family 20|Trehalose-phosphatase|haloacid dehalogenase-like hydrolase TRINITY_DN27992_c1_g2_i3 64.10520214 116.8527985 11.35760575 0.097195839 -3.362961642 1.36E-09 1.91E-08 Down 15.37545 28.71591 23.38874 0.3783763 4.057995 1.001254 PIN23171.1 hypothetical protein CDL12_04100 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN27992_c1_g3_i1 33.92378456 66.39862818 1.448940942 0.021821851 -5.518082738 1.25E-07 1.36E-06 Down 8.20452 18.53539 9.598486 0.001478343 0.5958437 0.01639073 XP_011099537.1 uncharacterized protein LOC105177926 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YP29 NA -- -- -- TRINITY_DN27992_c2_g2_i7 75.65662855 151.3132571 0 0 #NAME? 1.45E-42 1.26E-40 Down 10.71789 9.721454 13.73831 0 1.23E-19 0 CDP04261.1 unnamed protein product [Coffea canephora] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111S54 carboxyl-terminal peptidase -- -- -- TRINITY_DN27997_c1_g2_i1 33.74876317 49.36551675 18.13200959 0.36730112 -1.4449648 0.00540977 0.022674578 Down 8.991171 8.9336 4.463268 1.318091 3.254616 1.958445 AQK62885.1 ATP binding protein [Zea mays] P36616|DSK1_SCHPO Protein kinase dsk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dsk1 PE=3 SV=2 thj:104810887 K08832 "SRPK3, STK23" serine/threonine-protein kinase SRPK3 -- -- KOG1290 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XRBH SRSF protein kinase "Biological Process: spliceosomal complex assembly (GO:0000245);|Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: cell cycle (GO:0007049);|Biological Process: regulation of gene expression (GO:0010468);|Cellular Component: cell division site (GO:0032153);|Biological Process: intracellular signal transduction (GO:0035556);|Cellular Component: mitotic spindle pole body (GO:0044732);|Biological Process: positive regulation of protein export from nucleus (GO:0046827);|Biological Process: positive regulation of mRNA splicing, via spliceosome (GO:0048026);|Molecular Function: RNA uridylyltransferase activity (GO:0050265);|Biological Process: regulation of mRNA processing (GO:0050684);|Biological Process: cell division (GO:0051301);|Biological Process: maintenance of protein location in nucleus (GO:0051457);" -- -- TRINITY_DN28014_c0_g2_i1 31.29801817 44.30406962 18.29196673 0.412873284 -1.276229025 0.006774522 0.027469037 Down 5.450879 3.130434 3.766117 1.462039 0.9699347 1.662776 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28019_c2_g3_i1 111.2721404 185.3448332 37.19944759 0.20070399 -2.316858795 6.09E-05 0.000422667 Down 29.20223 41.19973 19.69712 8.544261 1.624887 4.324595 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28024_c1_g5_i1 9.250851094 18.11591384 0.385788347 0.02129555 -5.553304208 1.82E-05 0.00014031 Down 2.363517 1.077038 1.618469 0 0 0.1216933 EYU21105.1 hypothetical protein MIMGU_mgv1a021133mg [Erythranthe guttata] Q6L3Z0|R1B13_SOLDE Putative late blight resistance protein homolog R1B-13 OS=Solanum demissum OX=50514 GN=R1B-13 PE=3 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Molecular Function: ADP binding (GO:0043531); -- -- TRINITY_DN28025_c2_g3_i1 18.11499842 27.16723267 9.062764167 0.333591731 -1.583844568 0.009282987 0.03582881 Down 4.073967 4.50146 6.322114 0.5129039 0.9827084 2.561301 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28028_c0_g1_i1 10.05583643 20.11167286 0 0 #NAME? 8.07E-07 7.86E-06 Down 3.50678 3.710976 1.861768 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28031_c0_g3_i1 35.77411653 53.41832146 18.12991159 0.339395007 -1.558962754 0.000426778 0.002454109 Down 8.952044 11.54852 10.7719 3.930411 2.630323 1.970619 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28041_c0_g1_i5 197.6641588 265.0399911 130.2883265 0.491579878 -1.024502232 4.46E-08 5.16E-07 Down 6.692756 6.415619 6.731811 2.446372 2.506258 2.944417 EYU34388.1 hypothetical protein MIMGU_mgv1a001745mg [Erythranthe guttata] Q9ZSP5|AIR3_ARATH Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana OX=3702 GN=AIR3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Biological Process: response to auxin (GO:0009733);|Biological Process: lateral root morphogenesis (GO:0010102); -- -- TRINITY_DN28041_c0_g2_i1 14.25135103 24.88034971 3.622352355 0.145590894 -2.780007971 0.007361999 0.029477218 Down 7.196168 6.957311 1.97917 0.01908042 1.873315 4.37E-31 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28051_c0_g2_i2 80.87969676 51.14587063 110.6135229 2.162706813 1.1128381 0.010863916 0.04074314 Up 6.067631 1.929275 1.617768 6.061904 4.502693 6.183648 XP_011096293.1 stem-specific protein TSJT1 [Sesamum indicum] P24805|TSJT1_TOBAC Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41118MX Pfam:DUF3711 -- -- -- TRINITY_DN28053_c0_g1_i2 72.94448802 100.4176981 45.47127795 0.452821353 -1.142986103 0.000202791 0.001259407 Down 4.898331 4.085976 3.703651 1.359264 1.43435 1.849148 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28057_c1_g1_i1 36.87405403 51.80777855 21.94032951 0.423494891 -1.239583531 0.019715124 0.06702581 Down 12.9048 5.823204 7.846729 2.133785 3.582308 3.404928 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28057_c2_g3_i2 16.08876118 31.40594567 0.771576693 0.024567854 -5.347084336 8.90E-09 1.13E-07 Down 2.162564 2.346248 2.850757 2.96E-70 0 0.1317045 PIM98863.1 Copper chaperone [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28058_c0_g1_i7 105.229832 159.3186078 51.14105623 0.320998639 -1.639360916 3.61E-06 3.16E-05 Down 8.957243 8.210043 12.80324 3.047766 1.651167 3.065768 XP_019184639.1 PREDICTED: uncharacterized protein LOC109179592 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF13952.5 Domain of unknown function (DUF4216) TRINITY_DN28058_c0_g2_i3 93.97846503 175.934606 12.02232411 0.06833405 -3.871251562 7.26E-32 4.33E-30 Down 13.4031 12.09579 10.35485 0.781291 1.209696 0.006281205 XP_019184639.1 PREDICTED: uncharacterized protein LOC109179592 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41106E3 NA -- PF13952.5 Domain of unknown function (DUF4216) TRINITY_DN28058_c0_g3_i1 14.0449899 28.08997981 0 0 #NAME? 1.72E-09 2.39E-08 Down 3.666695 4.768924 5.959016 0 0 5.32E-43 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28064_c0_g1_i8 1246.44555 811.3708466 1681.520253 2.07244352 1.051332785 3.96E-32 2.39E-30 Up 22.88935 24.93931 24.88758 38.8583 41.56568 41.23705 AHK06500.1 "HMG CoA reductase, partial [Pogostemon cablin]" P48021|HMDH_CAMAC 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Camptotheca acuminata OX=16922 PE=3 SV=1 sind:105172989 K00021 HMGCR hydroxymethylglutaryl-CoA reductase (NADPH) ko00900 Terpenoid backbone biosynthesis KOG2480 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) reductase [I] METABOLISM Lipid transport and metabolism I COG1257 )-reductase Molecular Function: hydroxymethylglutaryl-CoA reductase (NADPH) activity (GO:0004420);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: isoprenoid biosynthetic process (GO:0008299);|Biological Process: coenzyme A metabolic process (GO:0015936);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: NADP binding (GO:0050661); PF00368.17 Hydroxymethylglutaryl-coenzyme A reductase TRINITY_DN28068_c0_g5_i1 8.873328345 16.27661995 1.470036737 0.090315848 -3.468877022 0.045885288 0.132315911 Down 5.168598 0.5344928 2.397435 0.6077333 6.74E-11 0.03778068 KZV54664.1 "hypothetical protein F511_44525, partial [Dorcoceras hygrometricum]" P08770|TRA1_MAIZE Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG410ZMIU transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: transposition (GO:0032196);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN28068_c1_g1_i1 29.96296112 41.27735354 18.6485687 0.451786927 -1.14628557 0.015997676 0.056297377 Down 6.142463 7.483092 6.33146 1.11339 2.954215 3.139362 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28069_c0_g2_i1 13.60190485 20.19548409 7.008325613 0.347024393 -1.526891018 0.039617083 0.117692293 Down 4.057124 2.053685 2.74611 0.7324923 1.193289 0.521084 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28070_c0_g4_i1 57.35427532 83.57030293 31.1382477 0.372599436 -1.424302606 7.91E-05 0.000536519 Down 4.809908 3.629238 2.77726 1.26746 1.144325 0.9817645 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28074_c0_g1_i1 50.15403109 83.32778437 16.98027781 0.203776903 -2.294937558 6.99E-05 0.000478853 Down 19.85949 14.96749 9.110406 3.138608 2.552841 1.558469 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28074_c1_g3_i1 22.47854862 44.95709724 0 0 #NAME? 7.67E-15 1.75E-13 Down 2.705787 3.29065 4.430514 2.06E-64 2.75E-69 1.69E-64 XP_022883843.1 stress-response A/B barrel domain-containing protein At5g22580-like [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YNSU Dabb -- -- -- TRINITY_DN28074_c1_g4_i2 131.5744085 263.148817 0 0 #NAME? 6.09E-81 1.26E-78 Down 19.57664 22.43506 22.07833 0 7.22E-48 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28078_c0_g3_i2 7.335245898 14.6704918 0 0 #NAME? 0.002044106 0.009821963 Down 0.1906069 2.929912 2.057313 0 0 0 XP_025680283.1 uncharacterized protein LOC112780243 [Arachis hypogaea] Q5AXT5|PIF1_EMENI ATP-dependent DNA helicase PIF1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pif1 PE=3 SV=2 -- -- -- -- -- -- KOG0987 DNA helicase PIF1/RRM3 [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " L COG0507 exodeoxyribonuclease v alpha Biological Process: mitochondrial genome maintenance (GO:0000002);|Biological Process: telomere maintenance (GO:0000723);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: replication fork (GO:0005657);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: DNA replication (GO:0006260);|Biological Process: DNA repair (GO:0006281);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA duplex unwinding (GO:0032508);|Molecular Function: ATP-dependent 5'-3' DNA helicase activity (GO:0043141); -- -- TRINITY_DN28080_c0_g1_i1 5.578569144 10.77134994 0.385788347 0.035816156 -4.803245694 0.002406933 0.011296309 Down 1.545395 1.718463 1.520125 0 0 0.2079548 XP_011070494.1 ribosomal L1 domain-containing protein 1 [Sesamum indicum] Q9UT32|RL1DB_SCHPO Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC8F11.04 PE=3 SV=1 sind:105156139 K14775 "UTP30, RSL1D1" ribosome biogenesis protein UTP30 -- -- KOG1685 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG4111W39 Ribosomal L1 domain containing 1 Biological Process: maturation of LSU-rRNA (GO:0000470);|Molecular Function: RNA binding (GO:0003723);|Cellular Component: nucleolus (GO:0005730);|Biological Process: maturation of SSU-rRNA (GO:0030490);|Cellular Component: 90S preribosome (GO:0030686); PF00687.20 Ribosomal protein L1p/L10e family TRINITY_DN28080_c1_g3_i1 5.349712733 10.31363712 0.385788347 0.037405655 -4.740599815 0.003097019 0.014045659 Down 1.208318 1.178129 1.463802 0 0 0.1565595 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28087_c0_g1_i1 39.90544776 77.26470098 2.546194546 0.032954176 -4.923394897 1.63E-18 4.84E-17 Down 11.66522 7.821041 9.289272 0.2000511 0.5901845 3.45E-19 PIN04161.1 "Protein involved in vacuolar polyphosphate accumulation, contains SPX domain [Handroanthus impetiginosus]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28087_c0_g4_i1 68.57416408 114.7246926 22.42363561 0.195456053 -2.35508383 2.83E-12 5.26E-11 Down 19.03106 20.23313 19.00826 0.6437105 6.399384 2.024863 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28087_c0_g5_i1 237.9106613 438.8876705 36.93365215 0.084152859 -3.570843907 4.48E-68 7.32E-66 Down 61.16832 61.61592 55.84775 2.71939 6.096961 3.187872 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28088_c1_g1_i25 518.5229305 899.7342778 137.3115833 0.152613485 -2.712045654 1.83E-89 4.12E-87 Down 14.424 15.86124 13.84328 1.967482 1.775613 1.693424 PIN17133.1 Serine/threonine protein kinase [Handroanthus impetiginosus] C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF13855.5,PF12799.6,PF11721.7,PF07714.16,PF00069.24" Leucine rich repeat|Leucine Rich repeats (2 copies)|Di-glucose binding within endoplasmic reticulum|Protein tyrosine kinase|Protein kinase domain TRINITY_DN28095_c1_g2_i1 13.78496137 6.364611602 21.20531115 3.331752583 1.73628127 0.016547659 0.057856263 Up 0.2741668 1.399155 0.7040868 1.337507 2.524164 2.512827 PQP95916.1 putative disease resistance protein [Prunus yedoensis var. nudiflora] O23317|DRL24_ARATH Probable disease resistance protein At4g14610 OS=Arabidopsis thaliana OX=3702 GN=At4g14610 PE=3 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat -- PF00931.21 NB-ARC domain TRINITY_DN28095_c2_g1_i10 264.6324938 502.6201553 26.64483226 0.053011866 -4.237540869 5.70E-93 1.33E-90 Down 15.28875 17.54325 17.12006 0.9013975 0.697998 0.5280853 PHT63353.1 hypothetical protein T459_32717 [Capsicum annuum] O22727|DRL16_ARATH Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana OX=3702 GN=At1g61190 PE=3 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat -- -- -- TRINITY_DN28095_c2_g3_i1 49.74947515 67.55820084 31.94074946 0.472788633 -1.080732743 0.003148666 0.014242891 Down 8.207037 5.600524 7.689793 1.834887 3.385475 2.935986 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28098_c0_g4_i1 25.17413493 49.62379939 0.724470471 0.014599254 -6.0979615 4.31E-14 9.25E-13 Down 2.482644 3.381502 3.071981 0 0.0802447 0 PIN10055.1 Tyrosine kinase [Handroanthus impetiginosus] F4JTP5|STY46_ARATH Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1 -- -- -- -- -- -- KOG0192 Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: protein serine/threonine/tyrosine kinase activity (GO:0004712);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytosol (GO:0005829);|Biological Process: chloroplast organization (GO:0009658); -- -- TRINITY_DN28099_c0_g2_i2 29.79058287 58.83314215 0.748023582 0.012714323 -6.297401526 7.67E-17 2.04E-15 Down 2.697992 4.011983 3.55714 3.81E-30 0.06706824 0.07271942 PIN13691.1 Acyl-CoA synthetase [Handroanthus impetiginosus] Q8H151|AAE13_ARATH Malonate--CoA ligase OS=Arabidopsis thaliana OX=3702 GN=AAE13 PE=1 SV=2 sind:105157654 K18660 ACSF3 malonyl-CoA/methylmalonyl-CoA synthetase ko00280 "Valine, leucine and isoleucine degradation" KOG1176 Acyl-CoA synthetase [I] METABOLISM Lipid transport and metabolism IQ COG0318 Amp-dependent synthetase and ligase Cellular Component: nucleus (GO:0005634);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: cytosol (GO:0005829);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Cellular Component: membrane (GO:0016020);|Molecular Function: malonyl-CoA synthetase activity (GO:0090409);|Biological Process: malonate catabolic process (GO:0090410); PF00501.27 AMP-binding enzyme TRINITY_DN28100_c0_g2_i1 9.196686244 17.30666678 1.086705707 0.062791161 -3.993294694 0.000230104 0.001409029 Down 1.834171 1.545027 3.134196 1.43E-80 0.3622746 1.71E-95 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28100_c0_g3_i1 73.50925463 121.430837 25.58767225 0.210718075 -2.246614022 4.02E-09 5.35E-08 Down 12.18301 12.49158 9.719537 4.172994 0.4164008 1.266958 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28100_c0_g8_i1 20.03400085 40.06800169 0 0 #NAME? 3.63E-13 7.28E-12 Down 3.656388 4.591898 3.946917 2.81E-74 0 8.05E-64 OMP06881.1 "Transposase, Tc1-like protein [Corchorus olitorius]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28104_c0_g2_i2 196.6062285 264.0096289 129.2028281 0.489386803 -1.030952899 7.23E-08 8.13E-07 Down 9.97635 9.722837 8.120815 3.52258 3.848742 3.605687 PIN15329.1 "Glucan endo-1,3-beta-D-glucosidase [Handroanthus impetiginosus]" Q9M088|E135_ARATH "Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana OX=3702 GN=At4g31140 PE=2 SV=1" sind:105164963 K19893 GN5_6 "glucan endo-1,3-beta-glucosidase 5/6" ko00500 Starch and sucrose metabolism -- -- -- -- -- G ENOG410YE7X "glucan endo-1,3-beta-glucosidase" "Cellular Component: vacuole (GO:0005773);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: defense response (GO:0006952);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: anchored component of membrane (GO:0031225);|Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);|Cellular Component: anchored component of plasma membrane (GO:0046658);" "PF00332.17,PF07983.12" Glycosyl hydrolases family 17|X8 domain TRINITY_DN28106_c0_g5_i1 5.182556246 0 10.36511249 Inf Inf 0.002509143 0.011701001 Up 0 1.55E-67 1.30E-61 0.2471861 2.172024 1.266549 -- -- -- -- -- -- -- -- -- -- KOG2112 Lysophospholipase [I] METABOLISM Lipid transport and metabolism S COG0400 phospholipase carboxylesterase -- -- -- TRINITY_DN28108_c0_g1_i2 67.97112854 117.1491938 18.79306332 0.160419912 -2.640074871 1.07E-14 2.41E-13 Down 10.77041 9.128302 10.58017 1.716158 0.3109011 1.997331 CAA20589.1 putative aspartate--tRNA ligase [Arabidopsis thaliana] F4JJT9|SYDM_ARATH "Aspartate--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g33760 PE=2 SV=1" rcu:8273837 K01876 "DARS, aspS" aspartyl-tRNA synthetase ko00970 Aminoacyl-tRNA biosynthesis KOG2411 "Aspartyl-tRNA synthetase, mitochondrial" [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0173 aspartyl-trna synthetase Molecular Function: DNA binding (GO:0003677);|Molecular Function: aspartate-tRNA ligase activity (GO:0004815);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: tRNA aminoacylation for protein translation (GO:0006418);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: membrane (GO:0016020);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN28108_c0_g4_i9 192.8103031 257.440665 128.1799412 0.497900909 -1.006069445 1.53E-07 1.65E-06 Down 8.680649 8.204383 7.179163 2.787086 3.081463 3.819686 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28108_c0_g5_i3 102.957306 200.2691054 5.645506533 0.028189603 -5.14869304 4.14E-47 4.11E-45 Down 33.91777 27.57629 28.23033 0 0.7246829 1.322191 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28109_c0_g1_i1 18.57837853 29.54820779 7.608549276 0.257496134 -1.957377322 0.03616911 0.10957915 Down 9.150924 4.794386 3.004948 0.3371313 0.576004 2.651813 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28110_c1_g1_i3 72.51205525 44.00926801 101.0148425 2.295308399 1.198688008 9.02E-05 0.00060377 Up 1.123878 1.574968 1.487297 2.318334 2.808784 2.613767 XP_020549318.1 IQ domain-containing protein IQM1 [Sesamum indicum] O82645|IQM1_ARATH IQ domain-containing protein IQM1 OS=Arabidopsis thaliana OX=3702 GN=IQM1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111I0K calmodulin-binding family Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: regulation of stomatal movement (GO:0010119); PF08276.10 PAN-like domain TRINITY_DN28112_c1_g1_i2 24.65453326 45.0653947 4.243671814 0.094166973 -3.408635032 1.62E-05 0.000126341 Down 7.801186 8.414583 3.520407 0 0 1.523659 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28112_c3_g1_i2 12.99208457 23.66943906 2.31473008 0.09779404 -3.35410964 0.004399473 0.019001453 Down 4.617604 6.417562 1.428518 3.73E-16 0 0.984544 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28114_c0_g1_i1 24.02012629 36.92429987 11.11595271 0.301047081 -1.731938964 0.001340334 0.006766965 Down 4.113261 3.020347 5.089944 0.675937 1.349829 0.9419216 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28115_c1_g3_i1 26.54504099 39.3024379 13.78764407 0.350808876 -1.511242843 0.002776289 0.012795623 Down 4.353793 3.686601 5.448131 0.6226102 1.582255 1.614567 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28116_c0_g1_i1 28.50783004 56.24408338 0.771576693 0.013718362 -6.187747964 8.31E-07 8.08E-06 Down 3.787966 1.705342 5.548824 8.75E-65 2.18E-61 0.1020393 PIN25678.1 hypothetical protein CDL12_01585 [Handroanthus impetiginosus] P20026|MYB1_HORVU Myb-related protein Hv1 OS=Hordeum vulgare OX=4513 GN=MYB1 PE=2 SV=1 -- -- -- -- -- -- KOG0048 "Transcription factor, Myb superfamily" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5147 Myblike DNAbinding domain containing protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634); -- -- TRINITY_DN28121_c0_g1_i3 771.0978596 1117.183009 425.0127101 0.380432487 -1.394287646 1.29E-34 8.60E-33 Down 34.2312 30.95812 28.57929 9.384936 9.319188 10.11842 KZV47481.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Dorcoceras hygrometricum] P08770|TRA1_MAIZE Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: transposition (GO:0032196);|Molecular Function: protein dimerization activity (GO:0046983); "PF02892.14,PF05699.13" BED zinc finger|hAT family C-terminal dimerisation region TRINITY_DN28123_c0_g2_i1 48.14421351 95.51685032 0.771576693 0.008077912 -6.951801889 2.95E-16 7.49E-15 Down 8.066786 14.09293 8.662878 9.59E-53 4.00E-62 0.1653046 XP_011070167.1 protein SUPPRESSOR OF MAX2 1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28123_c0_g3_i1 12.76980628 25.53961255 0 0 #NAME? 1.20E-08 1.50E-07 Down 3.848469 2.391289 3.895444 0 0 1.04E-78 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28125_c0_g2_i1 45.28142662 66.48531132 24.07754192 0.362148292 -1.465347525 0.00109105 0.00564142 Down 14.03061 10.35453 7.04537 3.52503 3.187703 2.515978 XP_011079292.1 VIN3-like protein 2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YG10 protein VERNALIZATION INSENSITIVE -- -- -- TRINITY_DN28128_c0_g2_i2 238.224712 335.574709 140.8747149 0.419801347 -1.252221298 7.96E-13 1.55E-11 Down 11.66345 11.46062 10.57817 3.595418 3.83982 3.980793 PIN17957.1 hypothetical protein CDL12_09375 [Handroanthus impetiginosus] Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E16 PE=2 SV=1 -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN28129_c0_g2_i1 69.85850008 119.2256116 20.49138857 0.171870694 -2.540604528 4.04E-14 8.70E-13 Down 13.60959 19.13536 15.71143 1.691508 2.310802 2.655751 XP_021288826.1 cycloartenol synthase 2 [Herrania umbratica] Q8W3Z4|CAS1_BETPL Cycloartenol synthase OS=Betula platyphylla OX=78630 GN=CASBPX1 PE=1 SV=1 mdm:103453651 K01853 E5.4.99.8 cycloartenol synthase ko00100 Steroid biosynthesis KOG0497 Oxidosqualene-lanosterol cyclase and related proteins [I] METABOLISM Lipid transport and metabolism I COG1657 Squalene--hopene cyclase Biological Process: tetracyclic triterpenoid biosynthetic process (GO:0010686);|Molecular Function: cycloartenol synthase activity (GO:0016871); -- -- TRINITY_DN28130_c0_g1_i4 129.5129415 189.1960352 69.82984788 0.369087269 -1.437966121 9.38E-10 1.33E-08 Down 24.47128 25.96472 21.7148 6.674983 7.511711 7.181644 PIN13739.1 hypothetical protein CDL12_13637 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28132_c0_g1_i2 41.2070038 59.38133912 23.03266849 0.387877216 -1.366328062 0.015924074 0.056082046 Down 6.008118 2.229113 4.657053 1.511031 1.204854 1.296005 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28133_c0_g1_i1 119.4941915 180.6286324 58.35975052 0.323092467 -1.629980979 3.26E-11 5.50E-10 Down 38.78603 37.19072 34.36239 10.55912 8.468547 9.642251 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28133_c1_g2_i1 20.80087012 39.34184764 2.259892593 0.057442462 -4.121738602 8.21E-09 1.05E-07 Down 5.079039 7.80776 5.617911 0.405315 0 0.3892579 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28133_c1_g3_i1 28.59567265 55.01793389 2.173411413 0.03950369 -4.661868764 7.90E-07 7.71E-06 Down 9.882657 9.588717 3.822054 0 0.7331327 1.56E-63 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28137_c0_g1_i2 22.55796664 38.40445751 6.711475762 0.174757729 -2.516571835 2.60E-05 0.000194769 Down 3.621639 4.335988 2.781867 0.4515362 0.4493068 0.6588413 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28139_c0_g1_i1 261.5160045 113.643641 409.3883681 3.602386941 1.848953153 4.50E-28 2.31E-26 Up 4.75763 4.941547 3.880996 12.75656 13.41421 13.27837 XP_012842508.1 PREDICTED: exocyst complex component EXO70B1-like [Erythranthe guttata] Q8VY27|E70H1_ARATH Exocyst complex component EXO70H1 OS=Arabidopsis thaliana OX=3702 GN=EXO70H1 PE=1 SV=1 -- -- -- -- -- -- KOG2344 Exocyst component protein and related proteins [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " S ENOG410YIGI exocyst complex Cellular Component: exocyst (GO:0000145);|Biological Process: response to molecule of bacterial origin (GO:0002237);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: exocytosis (GO:0006887);|Biological Process: defense response (GO:0006952);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to fungus (GO:0009620);|Cellular Component: endomembrane system (GO:0012505);|Cellular Component: membrane (GO:0016020);|Cellular Component: vesicle (GO:0031982);|Cellular Component: phagocytic vesicle (GO:0045335);|Biological Process: positive regulation of defense response to bacterium (GO:1900426); PF03081.14 Exo70 exocyst complex subunit TRINITY_DN28139_c0_g2_i1 73.55166464 32.3333344 114.7699949 3.549587353 1.827651318 4.13E-09 5.49E-08 Up 2.863508 4.434064 3.750583 8.900804 10.24623 12.52348 XP_011091478.1 exocyst complex component EXO70A1 [Sesamum indicum] Q8VY27|E70H1_ARATH Exocyst complex component EXO70H1 OS=Arabidopsis thaliana OX=3702 GN=EXO70H1 PE=1 SV=1 -- -- -- -- -- -- KOG2344 Exocyst component protein and related proteins [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " S ENOG410YIGI exocyst complex Cellular Component: exocyst (GO:0000145);|Biological Process: response to molecule of bacterial origin (GO:0002237);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: exocytosis (GO:0006887);|Biological Process: defense response (GO:0006952);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to fungus (GO:0009620);|Cellular Component: endomembrane system (GO:0012505);|Cellular Component: membrane (GO:0016020);|Cellular Component: vesicle (GO:0031982);|Cellular Component: phagocytic vesicle (GO:0045335);|Biological Process: positive regulation of defense response to bacterium (GO:1900426); PF03081.14 Exo70 exocyst complex subunit TRINITY_DN2813_c0_g1_i1 6.594818815 10.98458252 2.205055106 0.200740911 -2.316593425 0.045595888 0.131687569 Down 3.224539 1.559721 1.697585 1.12092 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28141_c0_g1_i2 53.3050956 95.94786954 10.66232166 0.111126195 -3.169729162 4.18E-15 9.76E-14 Down 11.43601 10.63185 14.27591 1.311287 1.462262 0.5231457 XP_011092328.1 uncharacterized zinc finger protein At4g06634 [Sesamum indicum] Q2V3L3|YY1_ARATH Zinc finger transcription factor YY1 OS=Arabidopsis thaliana OX=3702 GN=YY1 PE=1 SV=1 sind:105172546 K09201 YY transcription factor YY -- -- -- -- -- -- -- -- -- -- "Cellular Component: nuclear chromatin (GO:0000790);|Molecular Function: RNA polymerase II proximal promoter sequence-specific DNA binding (GO:0000978);|Molecular Function: RNA polymerase II distal enhancer sequence-specific DNA binding (GO:0000980);|Molecular Function: proximal promoter DNA-binding transcription repressor activity, RNA polymerase II-specific (GO:0001078);|Molecular Function: RNA polymerase II repressing transcription factor binding (GO:0001103);|Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Cellular Component: transcription factor complex (GO:0005667);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: defense response (GO:0006952);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to light stimulus (GO:0009416);|Biological Process: response to absence of light (GO:0009646);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);|Cellular Component: PcG protein complex (GO:0031519);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: regulation of defense response to fungus (GO:1900150);|Biological Process: regulation of response to salt stress (GO:1901000);" -- -- TRINITY_DN28141_c1_g2_i3 90.71635948 126.5686167 54.86410228 0.433473192 -1.205985321 1.19E-05 9.48E-05 Down 2.565359 3.411304 2.839782 1.201144 0.9819472 0.8827018 PNS96965.1 hypothetical protein POPTR_017G149800v3 [Populus trichocarpa] P25865|UBC1_ARATH Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 SV=1 pop:POPTR_0017s00870g K12795 "SUGT1, SGT1" suppressor of G2 allele of SKP1 ko04626 Plant-pathogen interaction KOG0419 Ubiquitin-protein ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " S COG5091 Suppressor of g2 allele of skp1 Biological Process: protein polyubiquitination (GO:0000209);|Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Molecular Function: ATP binding (GO:0005524);|Biological Process: DNA repair (GO:0006281);|Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);|Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);|Biological Process: histone H2B ubiquitination (GO:0033523);|Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);|Molecular Function: ubiquitin conjugating enzyme activity (GO:0061631); -- -- TRINITY_DN28141_c1_g3_i1 19.99887142 37.75367209 2.244070747 0.059439801 -4.07242691 2.84E-08 3.38E-07 Down 6.283566 5.128429 3.170703 0 0.3520051 0.3482548 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28147_c0_g2_i2 29.75050188 42.97189969 16.52910408 0.384649136 -1.378385028 0.005670879 0.023590377 Down 3.316479 2.446524 2.044583 1.12474 0.979874 0.2678314 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28149_c1_g1_i3 150.5250533 205.1264459 95.9236607 0.467631856 -1.096554881 3.62E-07 3.71E-06 Down 26.34882 30.13124 27.00705 9.799085 12.4786 9.081226 PHT40289.1 hypothetical protein CQW23_19143 [Capsicum baccatum] Q94C48|WDL5_ARATH Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGX4 Targeting protein for Xklp2 (TPX2) Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874);|Molecular Function: microtubule binding (GO:0008017);|Biological Process: cellular response to ethylene stimulus (GO:0071369); -- -- TRINITY_DN28153_c0_g1_i6 83.00003405 55.13099626 110.8690718 2.011011579 1.007921388 0.001855496 0.009009147 Up 4.678304 7.873376 3.963756 7.632106 7.827839 11.31595 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28153_c0_g2_i1 8.783551792 14.14984595 3.417257633 0.241504935 -2.049875422 0.024853126 0.080813608 Down 2.173556 2.113141 4.34659 0.6054065 0 1.178673 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2815_c0_g1_i1 29.98247931 18.65896187 41.30599674 2.213734988 1.146482524 0.014967003 0.053252637 Up 2.283839 2.236792 2.11523 3.601246 3.971422 4.434234 CDP16462.1 unnamed protein product [Coffea canephora] P32765|ASP_THECC 21 kDa seed protein OS=Theobroma cacao OX=3641 GN=ASP PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: endopeptidase inhibitor activity (GO:0004866); PF00197.17 Trypsin and protease inhibitor TRINITY_DN28166_c1_g2_i1 6.213987756 12.42797551 0 0 #NAME? 0.009131843 0.035335688 Down 1.003839 3.930102 0.7764493 0 0 0 PIN04018.1 hypothetical protein CDL12_23451 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28166_c1_g4_i1 11.51616933 20.43376393 2.598574717 0.127170634 -2.975162529 0.000670101 0.003659956 Down 3.252415 3.585089 3.794675 0.5231149 0.2657875 0.2726223 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28169_c0_g2_i2 22.31208209 44.62416418 0 0 #NAME? 1.04E-14 2.36E-13 Down 2.465499 2.86118 3.655145 1.10E-42 1.19E-47 3.79E-43 ABO93456.1 1L-myo-inositol 1-phosphate synthase [Jatropha curcas] Q9FYV1|INO1_SESIN Inositol-3-phosphate synthase OS=Sesamum indicum OX=4182 PE=2 SV=1 jcu:105650834 K01858 "INO1, ISYNA1" myo-inositol-1-phosphate synthase ko00562 Inositol phosphate metabolism KOG0693 Myo-inositol-1-phosphate synthase [I] METABOLISM Lipid transport and metabolism I COG1260 synthase Molecular Function: inositol-3-phosphate synthase activity (GO:0004512);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: inositol biosynthetic process (GO:0006021);|Biological Process: phospholipid biosynthetic process (GO:0008654); -- -- TRINITY_DN28172_c0_g2_i8 111.1583286 72.04983668 150.2668206 2.085595576 1.060459427 2.12E-05 0.000161377 Up 3.675183 3.575068 4.612937 6.092465 7.468802 6.392952 PIN20419.1 hypothetical protein CDL12_06889 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- P COG0748 pyridoxamine 5-phosphate -- PF10615.8 Protein of unknown function (DUF2470) TRINITY_DN28173_c0_g3_i3 114.1288582 75.5300617 152.7276546 2.022077716 1.015838446 0.000166445 0.001052586 Up 5.93512 2.543952 4.725782 7.279702 6.149278 8.143533 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28182_c0_g1_i1 57.04104034 82.93328509 31.1487956 0.37558859 -1.412774859 5.89E-05 0.000409805 Down 5.356205 5.331523 4.456857 1.844556 1.456409 1.33815 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28189_c0_g1_i9 371.9864293 211.5602257 532.4126328 2.516600797 1.331476383 6.77E-21 2.35E-19 Up 7.456951 8.112345 7.443627 14.3379 15.90271 16.54304 XP_012839031.1 PREDICTED: fatty acyl-CoA reductase 2-like [Erythranthe guttata] Q08891|FACR2_ARATH Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana OX=3702 GN=FAR2 PE=1 SV=2 sind:105159016 K13356 FAR alcohol-forming fatty acyl-CoA reductase ko00073|ko04146 "Cutin, suberine and wax biosynthesis|Peroxisome" KOG1221 Acyl-CoA reductase [I] METABOLISM Lipid transport and metabolism S ENOG410XS7R fatty-acyl-CoA reductase (alcohol-forming) activity "Biological Process: lipid metabolic process (GO:0006629);|Biological Process: suberin biosynthetic process (GO:0010345);|Biological Process: pollen exine formation (GO:0010584);|Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (GO:0016628);|Biological Process: long-chain fatty-acyl-CoA metabolic process (GO:0035336);|Molecular Function: fatty-acyl-CoA reductase (alcohol-forming) activity (GO:0080019);|Molecular Function: alcohol-forming fatty acyl-CoA reductase activity (GO:0102965);" "PF07993.11,PF03015.18,PF01370.20" Male sterility protein|Male sterility protein|NAD dependent epimerase/dehydratase family TRINITY_DN2818_c0_g1_i1 6.358635486 1.389340263 11.32793071 8.153460325 3.027412468 0.028071481 0.089358257 Up 0.3805207 0 0.2946726 1.041474 0.6902654 2.681407 XP_011099462.1 nodulation receptor kinase [Sesamum indicum] Q8LKZ1|NORK_PEA Nodulation receptor kinase OS=Pisum sativum OX=3888 GN=NORK PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T ENOG4111F5Q nodulation receptor Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Biological Process: nodulation (GO:0009877);|Cellular Component: integral component of membrane (GO:0016021); "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN28194_c1_g2_i1 98.2585325 137.0990765 59.41798848 0.43339452 -1.206247183 5.33E-06 4.53E-05 Down 30.1602 20.9598 24.95067 10.87817 7.431293 8.216896 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28195_c1_g3_i1 33.75618917 62.61489538 4.897482951 0.078215941 -3.676393523 1.57E-06 1.46E-05 Down 7.712616 4.504139 10.60484 0 0.5512256 0.9017652 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28205_c0_g1_i1 50.01482973 77.36240215 22.6672573 0.29300095 -1.771022754 3.47E-06 3.05E-05 Down 10.774 12.14783 8.81381 1.21833 3.400592 2.899968 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28205_c0_g3_i3 102.9337609 175.7550204 30.11250142 0.17133224 -2.545131439 3.05E-15 7.21E-14 Down 15.06357 15.16228 10.93039 1.62406 3.143953 0.8984268 KZV27152.1 hypothetical protein F511_21659 [Dorcoceras hygrometricum] P08770|TRA1_MAIZE Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG410ZCAC Pfam:hATC Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: transposition (GO:0032196);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN28205_c0_g4_i3 33.09455304 46.40672544 19.78238063 0.426282623 -1.23011785 0.005532564 0.023103926 Down 6.614079 5.541862 8.341355 0.9840503 2.77875 3.294495 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28205_c0_g5_i1 24.17109276 43.41833283 4.923852695 0.113404923 -3.140444823 1.55E-07 1.66E-06 Down 5.601422 6.222776 6.108499 0.597325 0 0.99995 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28206_c0_g1_i1 17.52594718 28.60598406 6.445910287 0.225334331 -2.14986096 0.004451841 0.019194759 Down 1.010919 2.831057 2.578836 0.09661824 0.2924953 0.8217384 XP_012841701.1 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Erythranthe guttata] Q9SXB3|Y1112_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11280 OS=Arabidopsis thaliana OX=3702 GN=At1g11280 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28206_c0_g5_i1 84.06378746 158.1190644 10.00851052 0.063297304 -3.981712132 4.14E-30 2.33E-28 Down 7.097053 8.642718 7.412209 0.5104873 0.3375704 0.3064623 PHU18182.1 ABC transporter G family member 11 [Capsicum chinense] Q8RXN0|AB11G_ARATH ABC transporter G family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCG11 PE=1 SV=1 -- -- -- -- -- -- KOG0061 "Transporter, ABC superfamily (Breast cancer resistance protein)" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1131 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Cellular Component: external side of plasma membrane (GO:0009897);|Biological Process: stem vascular tissue pattern formation (GO:0010222);|Biological Process: cotyledon vascular tissue pattern formation (GO:0010588);|Molecular Function: fatty acid transmembrane transporter activity (GO:0015245);|Biological Process: fatty acid transport (GO:0015908);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Molecular Function: protein homodimerization activity (GO:0042803);|Biological Process: transmembrane transport (GO:0055085);|Biological Process: cutin transport (GO:0080051);" -- -- TRINITY_DN28207_c0_g1_i1 163.7506469 56.43263676 271.0686569 4.803402296 2.264056643 1.09E-25 4.95E-24 Up 0.8297082 0.7005795 0.8764835 3.364521 2.99389 2.998446 XP_011090113.1 DDT domain-containing protein PTM-like [Sesamum indicum] F4JYC8|PTM_ARATH DDT domain-containing protein PTM OS=Arabidopsis thaliana OX=3702 GN=PTM PE=1 SV=1 -- -- -- -- -- -- KOG1473 "Nucleosome remodeling factor, subunit NURF301/BPTF" [BK] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics |Transcription S ENOG410YFBB DDT domain "Cellular Component: nucleus (GO:0005634);|Cellular Component: chloroplast outer membrane (GO:0009707);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: chloroplast-nucleus signaling pathway (GO:0010019);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: methylated histone binding (GO:0035064);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Molecular Function: metal ion binding (GO:0046872);" "PF15612.5,PF00628.28,PF02791.16" "WSTF, HB1, Itc1p, MBD9 motif 1|PHD-finger|DDT domain" TRINITY_DN28207_c0_g2_i1 18.96201362 9.809158241 28.114869 2.866185692 1.519132081 0.016736874 0.058369463 Up 0.21647 1.157804 1.587599 3.057461 2.099519 1.627563 XP_020552432.1 DDT domain-containing protein PTM-like [Sesamum indicum] F4JYC8|PTM_ARATH DDT domain-containing protein PTM OS=Arabidopsis thaliana OX=3702 GN=PTM PE=1 SV=1 -- -- -- -- -- -- KOG1473 "Nucleosome remodeling factor, subunit NURF301/BPTF" [BK] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics |Transcription S ENOG410YFBB DDT domain "Cellular Component: nucleus (GO:0005634);|Cellular Component: chloroplast outer membrane (GO:0009707);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: chloroplast-nucleus signaling pathway (GO:0010019);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: methylated histone binding (GO:0035064);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Molecular Function: metal ion binding (GO:0046872);" -- -- TRINITY_DN28211_c0_g2_i1 14.27323637 22.09774582 6.44872692 0.291827364 -1.776812926 0.011646755 0.043211696 Down 4.138325 2.036989 3.893821 0.7713196 0 1.558489 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28214_c0_g3_i2 35.0312678 22.90767628 47.15485931 2.058474144 1.041575327 0.020397893 0.068851989 Up 1.026208 1.039802 1.557994 2.469783 1.668014 1.82303 EYU28028.1 hypothetical protein MIMGU_mgv1a006231mg [Erythranthe guttata] A0A0G4DBR5|FG3N_SOYBN UDP-glycosyltransferase 79B30 OS=Glycine max OX=3847 GN=FG3 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Molecular Function: flavonol-3-O-glucoside glucosyltransferase activity (GO:0033838);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN28217_c1_g4_i1 8.595608678 15.38004118 1.811176178 0.117761465 -3.086060573 0.003631538 0.016104573 Down 2.027757 2.047877 4.867933 5.31E-54 0.7845662 2.19E-36 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28233_c0_g1_i2 40.88771696 81.00385722 0.771576693 0.009525185 -6.714037232 1.25E-23 5.10E-22 Down 4.978417 4.489093 6.59884 4.16E-59 1.17E-61 0.1161455 XP_022843742.1 probable receptor-like protein kinase At5g24010 [Olea europaea var. sylvestris] Q9LK35|THE1_ARATH Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana OX=3702 GN=THE1 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN28233_c0_g3_i1 23.06285578 31.73663653 14.38907504 0.453390044 -1.141175383 0.041417552 0.121987215 Down 2.332728 1.718284 1.690131 0.2724267 1.247835 0.5678989 EYU44448.1 "hypothetical protein MIMGU_mgv1a024322mg, partial [Erythranthe guttata]" -- -- -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN28233_c0_g4_i1 14.82465354 29.64930709 0 0 #NAME? 6.76E-10 9.80E-09 Down 5.291106 5.970782 5.420909 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28233_c0_g5_i1 12.49840511 24.99681022 0 0 #NAME? 0.000995591 0.005201754 Down 0.9227996 4.516606 8.605159 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28237_c0_g1_i1 37.36623732 8.760510232 65.97196441 7.53060754 2.912766261 7.03E-10 1.02E-08 Up 0.4786668 0.3308604 0.9800173 3.615442 4.035965 3.256577 XP_011089493.1 abscisic acid 8'-hydroxylase 2 isoform X1 [Sesamum indicum] O81077|ABAH2_ARATH Abscisic acid 8'-hydroxylase 2 OS=Arabidopsis thaliana OX=3702 GN=CYP707A2 PE=2 SV=1 sind:105170431 K09843 E1.14.13.93 (+)-abscisic acid 8'-hydroxylase ko00906 Carotenoid biosynthesis KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Biological Process: response to red or far red light (GO:0009639);|Biological Process: abscisic acid metabolic process (GO:0009687);|Biological Process: response to red light (GO:0010114);|Molecular Function: (+)-abscisic acid 8'-hydroxylase activity (GO:0010295);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: sterol metabolic process (GO:0016125);|Molecular Function: heme binding (GO:0020037);|Biological Process: abscisic acid catabolic process (GO:0046345);|Biological Process: release of seed from dormancy (GO:0048838);|Biological Process: oxidation-reduction process (GO:0055114); -- -- TRINITY_DN2824_c0_g1_i1 2975.072506 0.624179352 5949.520833 9531.74887 13.21852523 0 0 Up 0 0.09527056 0 277.7874 279.6041 252.8205 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28250_c0_g1_i1 280.7373114 172.1029163 389.3717064 2.26243526 1.17787651 1.76E-13 3.62E-12 Up 4.417384 3.796193 4.118634 7.342811 7.584588 7.61477 XP_012848705.1 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 [Erythranthe guttata] O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana OX=3702 GN=B120 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24,PF00954.19,PF01453.23,PF08276.10,PF11883.7" Protein tyrosine kinase|Protein kinase domain|S-locus glycoprotein domain|D-mannose binding lectin|PAN-like domain|Domain of unknown function (DUF3403) TRINITY_DN28253_c0_g2_i1 13.70473535 27.40947071 0 0 #NAME? 3.80E-09 5.07E-08 Down 3.037034 2.744053 2.217927 0 0 0 -- -- Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var. botrytis OX=3715 GN=AP1A PE=2 SV=1 -- -- -- -- -- -- KOG0014 MADS box transcription factor [K] INFORMATION STORAGE AND PROCESSING Transcription -- -- -- Molecular Function: RNA polymerase II regulatory region sequence-specific DNA binding (GO:0000977);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: flower development (GO:0009908);|Biological Process: cell differentiation (GO:0030154);|Biological Process: positive regulation of transcription by RNA polymerase II (GO:0045944);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN28253_c0_g5_i1 19.13963743 38.27927486 0 0 #NAME? 1.11E-12 2.12E-11 Down 7.57323 5.513747 8.545643 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28254_c0_g3_i1 71.36007088 32.04180759 110.6783342 3.454185094 1.788345393 0.003347364 0.015007102 Up 4.935467 5.752951 1.764707 16.37934 11.561 6.502621 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28263_c1_g1_i1 6.938045825 11.59791989 2.278171756 0.19642934 -2.347917655 0.029590974 0.093182316 Down 1.659539 0.6936145 1.820712 0.2539202 0 0.4942782 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28273_c0_g1_i13 88.29427226 118.4017564 58.18678816 0.491435178 -1.024926964 0.00020175 0.001253323 Down 8.827439 9.580292 9.758987 3.675599 4.15794 3.327574 ALT31540.1 "mediator of RNA polymerase II transcription subunit 35-like protein, partial [Rehmannia glutinosa]" B6EUA9|PR40A_ARATH Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana OX=3702 GN=PRP40A PE=1 SV=1 cam:101497411 K12821 "PRPF40, PRP40" pre-mRNA-processing factor 40 ko03040 Spliceosome KOG0152 Spliceosomal protein FBP11/Splicing factor PRP40 [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification A COG5104 PRP40 pre-mRNA processing factor 40 homolog "Biological Process: mRNA splicing, via spliceosome (GO:0000398);|Molecular Function: RNA binding (GO:0003723);|Cellular Component: U1 snRNP (GO:0005685);|Cellular Component: cytosol (GO:0005829);|Cellular Component: mediator complex (GO:0016592);|Cellular Component: U2-type prespliceosome (GO:0071004);" -- -- TRINITY_DN28282_c0_g1_i2 26.36096424 37.22750925 15.49441923 0.416208861 -1.264620414 0.012932239 0.047234722 Down 3.258075 3.174339 3.998376 1.111516 1.659223 0.7847531 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28282_c1_g3_i1 21.64465127 36.64321216 6.646090377 0.181373029 -2.462968159 0.002037559 0.009793616 Down 11.46959 4.318088 6.417482 1.018872 1.341091 0.7599384 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28282_c1_g4_i25 90.40826331 46.5457105 134.2708161 2.884708703 1.528425643 7.25E-08 8.16E-07 Up 0.9929749 1.54849 2.105853 3.624623 3.375758 3.812294 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28282_c1_g7_i1 22.71039278 31.73999983 13.68078573 0.431026648 -1.214151029 0.025544571 0.082665196 Down 3.29265 5.673024 8.252002 2.674512 1.963635 1.320364 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28287_c0_g1_i9 138.5701848 63.18850767 213.951862 3.385929971 1.759552135 2.03E-13 4.17E-12 Up 1.991373 1.398578 2.37574 6.081643 5.066095 4.577929 XP_011097362.1 E3 ubiquitin-protein ligase RGLG2-like [Sesamum indicum] Q9LY87|RGLG2_ARATH E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana OX=3702 GN=RGLG2 PE=1 SV=1 sind:105176302 K16280 RGLG E3 ubiquitin-protein ligase RGLG -- -- KOG1327 Copine [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XPC8 copine family Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: nucleus (GO:0005634);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: cytokinin metabolic process (GO:0009690);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: auxin metabolic process (GO:0009850);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: negative regulation of response to water deprivation (GO:0080148); PF07002.15 Copine TRINITY_DN28287_c0_g3_i1 6.30310798 10.76867004 1.837545922 0.170638149 -2.550987874 0.038038413 0.113922622 Down 2.64164 3.435592 0.7100892 0.8966274 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28290_c0_g1_i1 247.6952073 163.9293831 331.4610316 2.021974495 1.015764799 2.29E-09 3.13E-08 Up 5.038825 5.272007 5.728654 8.668303 8.650284 8.866865 XP_011072524.1 "chaperonin CPN60-like 2, mitochondrial [Sesamum indicum]" Q93ZM7|CH60C_ARATH "Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g13860 PE=1 SV=2" sind:105157756 K04077 "groEL, HSPD1" chaperonin GroEL ko03018 RNA degradation KOG0356 "Mitochondrial chaperonin, Cpn60/Hsp60p" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0459 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity) Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Biological Process: 'de novo' protein folding (GO:0006458);|Biological Process: mitochondrion organization (GO:0007005);|Biological Process: protein refolding (GO:0042026);|Biological Process: protein import into mitochondrial intermembrane space (GO:0045041);|Biological Process: response to cadmium ion (GO:0046686);|Molecular Function: unfolded protein binding (GO:0051082); PF00118.23 TCP-1/cpn60 chaperonin family TRINITY_DN28294_c0_g1_i11 2233.279957 1314.615004 3151.944911 2.397618239 1.261601964 4.90E-63 7.24E-61 Up 38.98654 38.93635 36.7123 74.68954 71.6701 75.41884 XP_011087209.1 protein NRT1/ PTR FAMILY 2.10-like [Sesamum indicum] Q9LV10|PTR53_ARATH Protein NRT1/ PTR FAMILY 2.11 OS=Arabidopsis thaliana OX=3702 GN=NPF2.11 PE=1 SV=1 sind:105168762 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: response to karrikin (GO:0080167);|Molecular Function: glucosinolate:proton symporter activity (GO:0090448);|Biological Process: phloem glucosinolate loading (GO:0090449);|Biological Process: glucosinolate transport (GO:1901349); PF00854.20 POT family TRINITY_DN28295_c0_g1_i1 67.46677057 105.4001676 29.53337355 0.28020234 -1.835459093 0.029797083 0.093720829 Down 32.31181 24.44495 9.551072 5.913554 8.692042 0.1235152 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28295_c1_g2_i1 40.88814801 71.01203066 10.76426537 0.151583686 -2.721813599 9.34E-10 1.33E-08 Down 7.620229 6.362292 7.689258 0.8290459 0.9570277 0.8953193 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28295_c1_g4_i1 121.2589152 174.5589109 67.95891958 0.389317963 -1.360979184 9.37E-09 1.19E-07 Down 9.218 10.00894 11.85546 3.701616 2.947041 3.124052 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28295_c1_g5_i2 162.6887079 260.8413872 64.53602868 0.247414835 -2.01499609 8.63E-07 8.38E-06 Down 34.409 19.99587 24.13001 5.177102 5.719266 4.824501 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28298_c1_g2_i3 67.4959121 108.3368034 26.65502084 0.246038465 -2.023044213 8.52E-10 1.22E-08 Down 8.330712 12.62887 11.1917 2.056411 2.514749 1.754626 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28303_c1_g2_i1 40.32558397 77.33339669 3.31777124 0.042902179 -4.542805261 1.79E-17 4.95E-16 Down 5.564947 5.918594 5.465465 0.1075136 0.3340217 0.1114605 PIN09283.1 Non-specific serine/threonine protein kinase [Handroanthus impetiginosus] Q9FLW0|Y5241_ARATH Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana OX=3702 GN=At5g24010 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN28310_c1_g1_i6 151.7062124 223.1610176 80.25140719 0.359612123 -1.47548644 1.12E-11 1.98E-10 Down 9.149552 7.191387 7.277826 1.909102 2.061749 2.90491 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28315_c1_g1_i6 827.454334 1267.838686 387.0699815 0.305299078 -1.711704864 2.00E-59 2.78E-57 Down 23.30076 21.909 23.92537 5.555091 5.785822 5.700225 KZV21177.1 WD-40 repeat protein [Dorcoceras hygrometricum] O22466|MSI1_SOLLC WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum OX=4081 GN=MSI1 PE=2 SV=1 sind:105172574 K10752 "RBBP4, HAT2, CAF1, MIS16" histone-binding protein RBBP4 -- -- KOG0264 "Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1" [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics S ENOG410XNU9 retinoblastoma binding protein Cellular Component: nucleus (GO:0005634); -- -- TRINITY_DN28318_c0_g3_i1 26.19852841 17.24257784 35.15447899 2.038818054 1.027733034 0.03898702 0.116231302 Up 0.4043932 0.5426768 0.4027174 0.8890457 0.7907212 0.5833661 KZV48884.1 hypothetical protein F511_16691 [Dorcoceras hygrometricum] P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN28320_c0_g3_i2 28.23056759 16.44573156 40.01540361 2.433178692 1.282842275 0.008831765 0.034358957 Up 0.7081523 1.072505 0.9098953 1.945398 1.849433 1.518395 KYP61490.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN28331_c0_g1_i9 1511.238011 422.0984096 2600.377613 6.160595619 2.62306984 4.68E-189 3.12E-186 Up 8.938014 9.770727 9.103912 48.07976 45.14432 45.02739 XP_011076924.1 hippocampus abundant transcript-like protein 1 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG2816 Predicted transporter ADD1 (major facilitator superfamily) [R] POORLY CHARACTERIZED General function prediction only G ENOG410ZVCA solute carrier family 46 -- PF07690.15 Major Facilitator Superfamily TRINITY_DN28331_c0_g3_i1 19.22424178 8.219423886 30.22905967 3.677758939 1.878826921 0.001569267 0.007776608 Up 1.807007 0.8421034 0.6032482 2.392456 2.987208 4.03977 PIN08719.1 putative transporter ADD1 (major facilitator superfamily) [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- G ENOG410ZVCA solute carrier family 46 -- -- -- TRINITY_DN28331_c0_g4_i1 15.24012633 2.232514886 28.24773777 12.65287768 3.661393633 3.46E-06 3.04E-05 Up 0 0.7469795 0.5934432 3.536697 5.435085 5.1497 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28334_c0_g1_i1 14.29304501 26.65714829 1.928941734 0.072361144 -3.788640982 0.011418899 0.042511119 Down 6.149692 2.80495 1.257936 5.40E-18 3.34E-46 0.6410116 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28335_c0_g2_i1 25.48933181 14.04675015 36.93191347 2.629214095 1.394631624 0.006186929 0.025392451 Up 1.58483 1.836814 1.473151 4.613923 3.467151 2.201729 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28338_c1_g3_i1 12.47674856 21.86719035 3.086306774 0.141138698 -2.824814489 0.000668149 0.00365105 Down 4.995714 3.738571 2.493691 0 0 1.332362 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28347_c0_g2_i1 12.65215588 5.550039557 19.7542722 3.559302957 1.831594736 0.015648055 0.055311647 Up 1.444986 0.00169107 0.8186411 3.026154 1.152956 2.312128 PIN21975.1 N-substituted formamide deformylase [Handroanthus impetiginosus] A0A1I9LN01|LAF3_ARATH Protein LONG AFTER FAR-RED 3 OS=Arabidopsis thaliana OX=3702 GN=LAF3 PE=2 SV=1 sind:105172175 K07047 K07047 N-substituted formamide deformylase -- -- -- -- -- -- -- S COG1574 amidohydrolase "Biological Process: de-etiolation (GO:0009704);|Biological Process: seed germination (GO:0009845);|Biological Process: response to far red light (GO:0010218);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810);|Cellular Component: perinuclear region of cytoplasm (GO:0048471);" PF07969.10 Amidohydrolase family TRINITY_DN28349_c0_g1_i1 27.4817783 46.39379845 8.569758162 0.184717752 -2.436605573 0.024517579 0.079963102 Down 16.88077 6.815627 4.913382 0.8418198 1.690534 1.698867 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28350_c0_g3_i1 14.7858301 27.38242693 2.18923326 0.0799503 -3.644752735 9.80E-06 7.94E-05 Down 4.81635 4.96457 3.726729 0.4884091 0.4931851 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28351_c0_g1_i1 15.89252679 26.66911137 5.115942204 0.191830246 -2.382097883 0.038628888 0.115340818 Down 7.788025 4.578724 1.465635 0.6698719 1.35035 0.2385928 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28365_c0_g1_i5 178.6321722 246.0489019 111.2154425 0.452005441 -1.145587954 1.00E-08 1.26E-07 Down 6.485103 7.167616 6.061938 2.224819 2.761173 2.195006 PIN16325.1 hypothetical protein CDL12_11009 [Handroanthus impetiginosus] Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana OX=3702 GN=IQD31 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YAVA IQ-domain Cellular Component: cytosol (GO:0005829);|Cellular Component: microtubule associated complex (GO:0005875);|Cellular Component: plasma membrane (GO:0005886); "PF13178.5,PF00612.26" Protein of unknown function (DUF4005)|IQ calmodulin-binding motif TRINITY_DN28368_c1_g2_i1 21.74900883 39.79691538 3.701102271 0.092999727 -3.426629707 1.90E-07 2.02E-06 Down 7.628118 5.212864 5.111155 0.7894624 0.2613161 0.2813454 EEF43950.1 "serine-threonine protein kinase, plant-type, putative [Ricinus communis]" Q9T0J1|CRK26_ARATH Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana OX=3702 GN=CRK26 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN28368_c2_g1_i2 98.13112943 138.8023985 57.45986037 0.413968786 -1.272406106 2.26E-06 2.05E-05 Down 4.793429 5.948036 4.107558 1.781013 1.711336 1.450744 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28368_c2_g4_i3 47.94054108 78.35260154 17.52848062 0.223712809 -2.160280229 7.59E-08 8.51E-07 Down 3.769285 5.834835 6.147463 1.420485 0.4277596 1.011172 -- -- -- -- sind:105161920 K15082 RAD7 DNA repair protein RAD7 -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2836_c0_g1_i1 2.56854814 5.137096279 0 0 #NAME? 0.03130811 0.097614468 Down 0 1.360848 1.808995 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28371_c0_g1_i2 823.5713447 467.3218978 1179.820792 2.524642643 1.336079193 3.59E-36 2.51E-34 Up 11.42775 10.43653 10.11309 20.93469 23.57705 20.57907 XP_011090733.1 probable linoleate 9S-lipoxygenase 5 isoform X1 [Sesamum indicum] Q43191|LOX15_SOLTU Probable linoleate 9S-lipoxygenase 5 OS=Solanum tuberosum OX=4113 GN=LOX1.5 PE=2 SV=1 sind:105171355 K15718 LOX1_5 linoleate 9S-lipoxygenase ko00591 Linoleic acid metabolism -- -- -- -- -- S ENOG410YN4N "Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity)" "Cellular Component: cytoplasm (GO:0005737);|Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);|Biological Process: oxylipin biosynthetic process (GO:0031408);|Molecular Function: metal ion binding (GO:0046872);" "PF00305.18,PF01477.22" Lipoxygenase|PLAT/LH2 domain TRINITY_DN28382_c2_g1_i6 70.29674478 43.32367962 97.26980994 2.2451881 1.166836318 0.000160264 0.001017893 Up 1.563743 2.36662 2.015144 3.654462 3.6022 3.458091 XP_011072072.1 probable metal-nicotianamine transporter YSL7 [Sesamum indicum] Q9SHY2|YSL7_ARATH Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana OX=3702 GN=YSL7 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG1297 oligo-peptide transporter Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: transmembrane transport (GO:0055085); PF03169.14 OPT oligopeptide transporter protein TRINITY_DN28382_c2_g2_i1 428.0305455 271.6389243 584.4221667 2.151466945 1.105320675 7.50E-13 1.46E-11 Up 12.7479 14.47987 15.29133 24.75623 27.27027 21.70359 XP_011072072.1 probable metal-nicotianamine transporter YSL7 [Sesamum indicum] Q9LUN2|YSL5_ARATH Probable metal-nicotianamine transporter YSL5 OS=Arabidopsis thaliana OX=3702 GN=YSL5 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG1297 oligo-peptide transporter Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: transmembrane transport (GO:0055085); PF03169.14 OPT oligopeptide transporter protein TRINITY_DN28392_c2_g3_i1 49.29289273 31.72975274 66.85603271 2.1070455 1.075221468 0.002103917 0.010062216 Up 4.540983 1.809739 1.676888 4.342502 4.675491 4.574261 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28395_c0_g1_i1 1008.216504 1361.795177 654.6378304 0.480716808 -1.056740848 3.66E-28 1.89E-26 Down 93.03461 96.20362 103.0576 32.25221 41.74872 39.43198 XP_011084978.1 7-deoxyloganetic acid glucosyltransferase-like [Sesamum indicum] U3U992|UGT8_CATRO 7-deoxyloganetic acid glucosyltransferase OS=Catharanthus roseus OX=4058 GN=UGT709C2 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glucosyltransferase activity (GO:0035251);|Molecular Function: 7-deoxyloganetic acid glucosyltransferase activity (GO:0102970);|Biological Process: (-)-secologanin biosynthetic process (GO:1900994); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN28395_c0_g4_i1 12.51328694 19.7798609 5.246712973 0.265255302 -1.914546508 0.014555811 0.052112308 Down 2.222349 2.98214 1.841801 0.2603216 0.516504 0.7618453 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28395_c0_g7_i1 88.48391149 125.9043094 51.06351362 0.405573994 -1.301962947 3.68E-06 3.22E-05 Down 7.817216 9.288956 7.710021 3.003825 2.967381 2.125978 XP_011096066.1 peroxidase 42-like [Sesamum indicum] Q9SB81|PER42_ARATH Peroxidase 42 OS=Arabidopsis thaliana OX=3702 GN=PER42 PE=1 SV=2 sind:105175345 K00430 E1.11.1.7 peroxidase ko00940 Phenylpropanoid biosynthesis -- -- -- -- -- G ENOG4111GTW peroxidase Molecular Function: peroxidase activity (GO:0004601);|Cellular Component: extracellular region (GO:0005576);|Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: heme binding (GO:0020037);|Biological Process: hydrogen peroxide catabolic process (GO:0042744);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: rhythmic process (GO:0048511); -- -- TRINITY_DN28395_c0_g8_i2 626.6330226 860.1542209 393.1118243 0.457024816 -1.129655591 3.57E-23 1.41E-21 Down 73.60218 73.67175 79.13134 26.96788 28.18805 28.3396 XP_011084978.1 7-deoxyloganetic acid glucosyltransferase-like [Sesamum indicum] U3U992|UGT8_CATRO 7-deoxyloganetic acid glucosyltransferase OS=Catharanthus roseus OX=4058 GN=UGT709C2 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glucosyltransferase activity (GO:0035251);|Molecular Function: 7-deoxyloganetic acid glucosyltransferase activity (GO:0102970);|Biological Process: (-)-secologanin biosynthetic process (GO:1900994); -- -- TRINITY_DN28398_c0_g1_i1 15.0064022 30.01280441 0 0 #NAME? 6.28E-10 9.13E-09 Down 5.762981 5.624782 3.620424 5.05E-39 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28398_c0_g2_i1 42.11342552 84.22685104 0 0 #NAME? 9.44E-27 4.55E-25 Down 6.063024 6.270052 4.693637 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28398_c1_g1_i1 8.196121401 3.375816103 13.0164267 3.85578666 1.94702523 0.048244796 0.137656422 Up 0.3749632 0.7425724 0.8757049 2.630529 1.516035 1.96207 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28398_c1_g6_i1 9.654724761 14.83431324 4.47513628 0.301674652 -1.728934617 0.048218997 0.137600109 Down 2.087958 0.8491653 2.036907 0.1660347 0.5051897 0.5400042 PRQ52706.1 putative diphosphate--fructose-6-phosphate 1-phosphotransferase [Rosa chinensis] Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Ricinus communis OX=3988 GN=PFP-BETA PE=3 SV=1 fve:101294972 K00895 "pfp, pfk" diphosphate-dependent phosphofructokinase ko00030|ko00051|ko00010 Pentose phosphate pathway|Fructose and mannose metabolism|Glycolysis / Gluconeogenesis KOG2440 Pyrophosphate-dependent phosphofructo-1-kinase [G] METABOLISM Carbohydrate transport and metabolism G COG0205 phosphohexokinase Molecular Function: 6-phosphofructokinase activity (GO:0003872);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: fructose 6-phosphate metabolic process (GO:0006002);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: diphosphate-fructose-6-phosphate 1-phosphotransferase activity (GO:0047334); -- -- TRINITY_DN283_c0_g1_i1 42.94777185 4.325607018 81.56993668 18.8574543 4.237063025 2.66E-18 7.81E-17 Up 0.1260202 0.2468323 0.1920471 2.853672 2.642123 3.340611 CAN65114.1 hypothetical protein VITISV_011221 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF14223.5,PF03732.16,PF13976.5" gag-polypeptide of LTR copia-type|Retrotransposon gag protein|GAG-pre-integrase domain TRINITY_DN28401_c0_g2_i9 320.2197593 640.4395187 0 0 #NAME? 3.46E-186 2.28E-183 Down 16.58406 19.58278 17.84071 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28403_c2_g4_i1 7.195067323 12.57895847 1.811176178 0.14398459 -2.79601368 0.014368624 0.051543778 Down 0.6629562 3.237959 3.160945 0 0.7314961 0 OIW14404.1 hypothetical protein TanjilG_15758 [Lupinus angustifolius] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XTC0 NA -- -- -- TRINITY_DN28406_c0_g3_i2 12.15713209 4.719949116 19.59431506 4.15138269 2.053591931 0.013172527 0.047981105 Up 0.3603487 0.3279536 1.920085 2.735422 3.770266 2.354146 XP_011082238.1 "carotenoid 9,10(9',10')-cleavage dioxygenase 1-like [Sesamum indicum]" Q84KG5|CCD_CROSA "Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus OX=82528 GN=CCD PE=1 SV=1" -- -- -- -- -- -- KOG1285 "Beta, beta-carotene 15,15'-dioxygenase and related enzymes" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG3670 dioxygenase "Cellular Component: cytoplasm (GO:0005737);|Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);|Molecular Function: metal ion binding (GO:0046872);" PF03055.14 Retinal pigment epithelial membrane protein TRINITY_DN28415_c1_g3_i1 8.551368109 16.36771785 0.735018369 0.044906588 -4.476929066 0.000182569 0.001144977 Down 2.038124 1.725985 2.226605 0.2145162 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28419_c1_g6_i1 73.35317909 44.09348212 102.6128761 2.327166537 1.218574457 0.010269475 0.038911708 Up 1.952618 3.002703 2.327163 3.391942 3.663786 6.62525 XP_012833480.1 PREDICTED: F-box/kelch-repeat protein At3g23880-like [Erythranthe guttata] Q9LU24|FB145_ARATH Putative F-box protein At3g16210 OS=Arabidopsis thaliana OX=3702 GN=At3g16210 PE=4 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF07734.12 F-box associated TRINITY_DN28421_c0_g2_i1 13.04161664 21.91267811 4.170555164 0.190326127 -2.393454471 0.001612656 0.007965536 Down 2.306864 2.24554 4.604894 0.4605818 0 0.9555795 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28422_c0_g3_i2 26.12206408 16.41912549 35.82500267 2.181906867 1.125589523 0.02285977 0.075522091 Up 2.131729 1.424343 1.09818 2.085896 2.581302 3.415744 XP_011071661.1 uncharacterized protein LOC105157064 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZGM2 NA -- -- -- TRINITY_DN28423_c0_g2_i1 17.25765853 34.51531705 0 0 #NAME? 2.14E-11 3.68E-10 Down 9.263752 6.040801 6.858744 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28427_c2_g1_i5 50.29725842 97.67026522 2.924251628 0.02994004 -5.06178005 1.78E-23 7.13E-22 Down 11.82552 12.45047 9.926125 0.5105742 0.2552473 2.82E-42 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28434_c1_g1_i4 1809.016025 1048.199633 2569.832417 2.451663152 1.293760773 8.29E-59 1.13E-56 Up 35.36796 35.79746 36.63797 70.84595 72.80325 69.63994 XP_011091219.1 inorganic phosphate transporter 1-4-like [Sesamum indicum] Q96303|PHT14_ARATH Inorganic phosphate transporter 1-4 OS=Arabidopsis thaliana OX=3702 GN=PHT1-4 PE=1 SV=1 sind:105171713 K08176 PHO84 "MFS transporter, PHS family, inorganic phosphate transporter" -- -- KOG0252 Inorganic phosphate transporter [P] METABOLISM Inorganic ion transport and metabolism G ENOG410ZVN7 phosphate transporter Molecular Function: inorganic phosphate transmembrane transporter activity (GO:0005315);|Cellular Component: nucleus (GO:0005634);|Cellular Component: vacuole (GO:0005773);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: phosphate ion transport (GO:0006817);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to abscisic acid (GO:0009737);|Molecular Function: symporter activity (GO:0015293);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021); "PF00083.23,PF07690.15" Sugar (and other) transporter|Major Facilitator Superfamily TRINITY_DN28439_c0_g1_i1 19.65819897 29.34762169 9.968776248 0.339679186 -1.557755275 0.025301389 0.082006851 Down 3.02952 6.551827 4.298124 0 2.657456 1.255114 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28442_c0_g2_i3 495.6818964 252.5416566 738.8221362 2.925545616 1.548705713 2.16E-34 1.43E-32 Up 13.48099 16.8738 14.58844 35.39059 38.02958 32.70247 XP_011096175.2 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Sesamum indicum] Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana OX=3702 GN=SD17 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN28442_c0_g3_i1 15.93889208 0.492078091 31.38570608 63.78196192 5.99507657 0.001547432 0.007682662 Up 3.90E-46 0.01422313 0.3351181 0.5351558 6.833889 7.290035 XP_011096175.2 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Sesamum indicum] Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN28442_c0_g4_i1 97.63257706 64.44811124 130.8170429 2.029804138 1.021340524 0.001173899 0.006015669 Up 3.530793 3.760796 3.265788 5.432977 4.297182 7.553334 XP_011096175.2 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Sesamum indicum] Q9SXB4|Y1130_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana OX=3702 GN=At1g11300 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- PF08276.10 PAN-like domain TRINITY_DN28444_c1_g4_i1 164.5204391 231.6703746 97.37050364 0.420297605 -1.250516859 1.87E-09 2.58E-08 Down 39.58914 38.25407 36.78401 13.80304 14.32771 10.70418 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28449_c0_g2_i1 7.03932569 0.492078091 13.58657329 27.61060395 4.78715054 0.000408005 0.00235901 Up 0 0 0.1577377 1.99148 1.789613 0.4484042 -- -- Q9M9W3|PP19_ARATH Serine/threonine-protein phosphatase PP1 isozyme 9 OS=Arabidopsis thaliana OX=3702 GN=TOPP9 PE=1 SV=1 -- -- -- -- -- -- KOG0374 "Serine/threonine specific protein phosphatase PP1, catalytic subunit" [TR] CELLULAR PROCESSES AND SIGNALING|POORLY CHARACTERIZED Signal transduction mechanisms |General function prediction only -- -- -- Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN28452_c0_g1_i1 12.33784939 23.51833374 1.15736504 0.049211184 -4.344869974 5.16E-06 4.40E-05 Down 1.627416 1.981443 2.538645 0 0 0.2385467 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28460_c1_g2_i1 21.8535879 30.98147702 12.72569878 0.410751843 -1.283661047 0.041459967 0.122084215 Down 5.098187 3.983854 5.646584 1.205487 3.657395 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28466_c0_g1_i3 9114.135397 4421.201932 13807.06886 3.122922019 1.642896545 4.01E-164 2.12E-161 Up 118.8554 116.2641 119.6322 290.7167 299.9905 303.4565 XP_011074155.1 "glucan 1,3-beta-glucosidase A-like [Sesamum indicum]" Q5B5X8|EXGA_EMENI "Probable glucan 1,3-beta-glucosidase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=exgA PE=3 SV=2" -- -- -- -- -- -- -- -- -- -- -- G COG2730 Glycoside hydrolase Family 5 "Molecular Function: glucan exo-1,3-beta-glucosidase activity (GO:0004338);|Cellular Component: extracellular region (GO:0005576);|Biological Process: cellular glucan metabolic process (GO:0006073);|Biological Process: glucan catabolic process (GO:0009251);|Cellular Component: cell surface (GO:0009986);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: cell wall organization (GO:0071555);" PF00150.17 Cellulase (glycosyl hydrolase family 5) TRINITY_DN28469_c1_g1_i2 26.62422319 35.98307391 17.26537246 0.479819276 -1.059436979 0.047616214 0.136248602 Down 3.924145 5.159034 2.276923 1.485037 0.7366862 2.159126 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28469_c1_g3_i1 4.369833426 8.739666852 0 0 #NAME? 0.002368704 0.011136464 Down 1.891942 1.236652 2.473556 0 0 3.51E-58 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28478_c0_g1_i1 26.53630264 37.49943614 15.57316914 0.415290755 -1.26780634 0.014037251 0.05055482 Down 1.900357 3.567248 2.145283 1.147203 0.6844847 0.6831398 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28483_c0_g1_i2 574.7503669 228.8716038 920.6291301 4.022469869 2.008081614 1.42E-60 2.04E-58 Up 6.111043 4.795614 5.812016 18.25481 17.49996 18.50598 XP_020553263.1 lysosomal beta glucosidase-like [Sesamum indicum] Q0CEF3|BGLL_ASPTN Probable beta-glucosidase L OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=bglL PE=3 SV=1 sind:105173945 K05349 bglX beta-glucosidase ko00940|ko00460|ko00500 Phenylpropanoid biosynthesis|Cyanoamino acid metabolism|Starch and sucrose metabolism -- -- -- -- -- G COG1472 hydrolase family 3 Cellular Component: extracellular region (GO:0005576);|Molecular Function: beta-glucosidase activity (GO:0008422);|Biological Process: cellulose catabolic process (GO:0030245);|Molecular Function: scopolin beta-glucosidase activity (GO:0102483); "PF00933.20,PF01915.21" Glycosyl hydrolase family 3 N terminal domain|Glycosyl hydrolase family 3 C-terminal domain TRINITY_DN28500_c6_g2_i1 13.05838006 0.984156182 25.13260393 25.53721084 4.674529058 1.07E-06 1.02E-05 Up 4.15E-06 4.54E-39 0.567013 3.223367 5.265537 2.998882 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28501_c0_g1_i1 605.0161816 946.2963293 263.7360338 0.278703431 -1.843197332 2.61E-53 3.16E-51 Down 26.69946 25.33075 25.77198 5.504991 6.0886 5.910861 XP_011090875.1 protein NRT1/ PTR FAMILY 1.2 isoform X1 [Sesamum indicum] Q9M817|PTR6_ARATH Protein NRT1/ PTR FAMILY 1.2 OS=Arabidopsis thaliana OX=3702 GN=NPF1.2 PE=1 SV=1 sind:105171421 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Molecular Function: peptide:proton symporter activity (GO:0015333);|Biological Process: nitrate transport (GO:0015706);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oligopeptide transmembrane transporter activity (GO:0035673);|Molecular Function: low-affinity nitrate transmembrane transporter activity (GO:0080054);|Molecular Function: peptide transmembrane transporter activity (GO:1904680); "PF00854.20,PF07690.15" POT family|Major Facilitator Superfamily TRINITY_DN28514_c0_g1_i1 20.31958815 29.27468727 11.36448903 0.388201894 -1.365120939 0.021221717 0.071056826 Down 3.027056 2.946945 1.739549 0.4128636 0.4101985 1.627206 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28516_c1_g4_i3 7.487367588 12.78022797 2.194507208 0.171711116 -2.541944656 0.017520959 0.060638067 Down 1.824507 1.104933 2.117873 0.4487775 0.2299268 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28516_c1_g5_i1 19.25717043 29.81381193 8.700528931 0.291828799 -1.776805833 0.002786418 0.012834488 Down 2.265221 1.9813 3.468867 0.2403084 0.4005643 1.245996 XP_011657094.1 PREDICTED: E3 ubiquitin-protein ligase COP1 isoform X2 [Cucumis sativus] P43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2 csv:101210608 K10143 "RFWD2, COP1" E3 ubiquitin-protein ligase RFWD2 ko04120|ko04712 Ubiquitin mediated proteolysis|Circadian rhythm - plant -- -- -- -- -- -- -- -- "Cellular Component: nuclear ubiquitin ligase complex (GO:0000152);|Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA repair (GO:0006281);|Biological Process: red, far-red light phototransduction (GO:0009585);|Biological Process: photomorphogenesis (GO:0009640);|Biological Process: shade avoidance (GO:0009641);|Biological Process: skotomorphogenesis (GO:0009647);|Biological Process: entrainment of circadian clock (GO:0009649);|Biological Process: regulation of stomatal movement (GO:0010119);|Cellular Component: nuclear body (GO:0016604);|Molecular Function: identical protein binding (GO:0042802);|Biological Process: anthocyanin-containing compound metabolic process (GO:0046283);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: photoperiodism, flowering (GO:0048573);|Molecular Function: ubiquitin protein ligase activity (GO:0061630);|Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);" -- -- TRINITY_DN28521_c0_g1_i7 2195.004425 745.7449276 3644.263923 4.886743158 2.28887328 6.87E-184 4.33E-181 Up 23.50425 20.79207 23.23919 87.80918 89.85897 88.75053 XP_011076352.1 putative glycerol-3-phosphate transporter 1 [Sesamum indicum] Q9C5L3|GLPT1_ARATH Putative glycerol-3-phosphate transporter 1 OS=Arabidopsis thaliana OX=3702 GN=At3g47420 PE=2 SV=1 sind:105160601 K13783 SLC37A1_2 "MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2" -- -- KOG2533 Permease of the major facilitator superfamily [G] METABOLISM Carbohydrate transport and metabolism G COG2271 transporter Biological Process: carbohydrate transport (GO:0008643);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857);|Biological Process: phosphate ion homeostasis (GO:0055062); PF07690.15 Major Facilitator Superfamily TRINITY_DN28526_c0_g2_i1 37.33139529 50.79034338 23.8724472 0.470019409 -1.089207761 0.011776803 0.043641327 Down 6.619204 7.230114 4.942515 3.067947 1.426113 2.729936 PIN26274.1 hypothetical protein CDL12_00978 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28535_c0_g5_i1 46.56302926 65.62509433 27.5009642 0.419061709 -1.25476539 0.006626898 0.026943455 Down 4.152924 2.930668 2.658061 0.5769363 0.7840234 1.973421 XP_012848474.1 PREDICTED: uncharacterized protein LOC105968393 [Erythranthe guttata] -- -- -- -- -- -- -- -- KOG1203 Predicted dehydrogenase [G] METABOLISM Carbohydrate transport and metabolism GM COG0702 epimerase dehydratase -- -- -- TRINITY_DN28538_c0_g1_i3 871.8931902 536.4649109 1207.32147 2.250513398 1.170254153 3.15E-22 1.18E-20 Up 20.27795 18.0568 17.74729 36.5222 34.36997 30.79378 XP_011099341.1 metal transporter Nramp3 [Sesamum indicum] Q9SNV9|NRAM3_ARATH Metal transporter Nramp3 OS=Arabidopsis thaliana OX=3702 GN=NRAMP3 PE=1 SV=2 -- -- -- -- -- -- KOG1291 Mn2+ and Fe2+ transporters of the NRAMP family [P] METABOLISM Inorganic ion transport and metabolism P COG1914 "H( )-stimulated, divalent metal cation uptake system (By similarity)" Molecular Function: manganese ion transmembrane transporter activity (GO:0005384);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: Golgi apparatus (GO:0005794);|Biological Process: manganese ion transport (GO:0006828);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to zinc ion (GO:0010043);|Molecular Function: cadmium ion transmembrane transporter activity (GO:0015086);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: iron ion homeostasis (GO:0055072);|Biological Process: positive regulation of reactive oxygen species metabolic process (GO:2000379); PF01566.17 Natural resistance-associated macrophage protein TRINITY_DN28544_c0_g1_i2 371.2823264 508.5071905 234.0574622 0.460283486 -1.119405413 3.23E-15 7.59E-14 Down 10.92679 9.42683 10.79054 4.340676 3.750022 3.464593 XP_011086698.1 oxysterol-binding protein-related protein 1D [Sesamum indicum] Q9SAF0|ORP1D_ARATH Oxysterol-binding protein-related protein 1D OS=Arabidopsis thaliana OX=3702 GN=ORP1D PE=2 SV=1 sind:105168341 K20456 OSBP oxysterol-binding protein 1 -- -- KOG1737 Oxysterol-binding protein [I] METABOLISM Lipid transport and metabolism S ENOG410XP9E Oxysterol-binding protein Cellular Component: cytosol (GO:0005829);|Molecular Function: lipid binding (GO:0008289);|Molecular Function: sterol transporter activity (GO:0015248);|Cellular Component: membrane (GO:0016020);|Molecular Function: sterol binding (GO:0032934);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231); "PF01237.17,PF15413.5,PF00169.28,PF15409.5" Oxysterol-binding protein|Pleckstrin homology domain|PH domain|Pleckstrin homology domain TRINITY_DN28560_c0_g1_i1 11.18441749 20.89879825 1.470036737 0.070340731 -3.82949587 7.03E-05 0.000481434 Down 2.791102 3.775714 3.968009 0.6246444 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28560_c1_g5_i2 26.40736797 51.36579499 1.448940942 0.028208284 -5.147737276 3.59E-13 7.19E-12 Down 2.963594 3.520287 3.485546 0 0.2506372 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28560_c1_g7_i1 7.592704888 15.18540978 0 0 #NAME? 2.24E-05 0.00016967 Down 3.201962 2.11048 3.349256 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28565_c1_g3_i1 19.87746995 34.47166861 5.283271298 0.153264159 -2.705907735 5.15E-05 0.000364163 Down 9.599027 4.336506 7.602074 0.00059604 0.8670628 1.725055 AMP82916.1 chromatin assembly factor 1 subunit [Catalpa bungei] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28567_c1_g1_i1 82.47527551 158.1761472 6.774403831 0.042828226 -4.545294259 1.47E-34 9.73E-33 Down 3.241977 3.044919 4.064562 0.148028 0.01827069 0.1963168 XP_022877512.1 kinesin-like protein KIN-14N [Olea europaea var. sylvestris] P46875|KN14N_ARATH Kinesin-like protein KIN-14N OS=Arabidopsis thaliana OX=3702 GN=KIN14N PE=1 SV=1 sind:105176730 K10405 KIFC1 kinesin family member C1 -- -- KOG0239 Kinesin (KAR3 subfamily) [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5059 Kinesin family member Molecular Function: microtubule motor activity (GO:0003777);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: kinesin complex (GO:0005871);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based movement (GO:0007018);|Molecular Function: microtubule binding (GO:0008017);|Molecular Function: ATPase activity (GO:0016887);|Biological Process: spindle assembly (GO:0051225); "PF09331.10,PF10536.8,PF00225.22,PF16796.4" Domain of unknown function (DUF1985)|Plant mobile domain|Kinesin motor domain|Microtubule binding TRINITY_DN28569_c0_g3_i5 42.00688311 26.79837554 57.21539069 2.135032051 1.094257728 0.006318952 0.025845756 Up 1.034097 1.614047 1.382376 2.501582 2.133735 2.261064 XP_011070109.1 BUD13 homolog [Sesamum indicum] -- -- sind:105155834 K13106 "BUD13, CWC26" pre-mRNA-splicing factor CWC26 -- -- KOG2654 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG410XSEZ BUD13 homolog (S. cerevisiae) -- PF09736.8 Pre-mRNA-splicing factor of RES complex TRINITY_DN28571_c0_g1_i1 813.5916633 523.5886291 1103.594698 2.10775146 1.075704759 2.09E-25 9.31E-24 Up 12.48139 11.55843 12.87442 21.4112 21.27848 20.08254 XP_011101657.1 glycosyltransferase family protein 64 protein C5 [Sesamum indicum] Q84WB7|GT645_ARATH Glycosyltransferase family protein 64 protein C5 OS=Arabidopsis thaliana OX=3702 GN=At5g04500 PE=2 SV=1 -- -- -- -- -- -- KOG1022 Acetylglucosaminyltransferase EXT2/exostosin 2 [GMW] METABOLISM|CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING Carbohydrate transport and metabolism |Cell wall/membrane/envelope biogenesis |Extracellular structures S ENOG410XQYV exostoses (multiple)-like 2 -- PF09258.9 Glycosyl transferase family 64 domain TRINITY_DN28578_c2_g3_i1 46.57522477 63.04652738 30.10392217 0.477487396 -1.066465444 0.022739589 0.075191666 Down 5.822461 5.10685 2.609033 2.117521 1.457675 1.69008 XP_020552590.1 DNA ligase 1 [Sesamum indicum] Q42572|DNLI1_ARATH DNA ligase 1 OS=Arabidopsis thaliana OX=3702 GN=LIG1 PE=2 SV=2 sind:105170756 K10747 LIG1 DNA ligase 1 ko03430|ko03030|ko03420|ko03410 Mismatch repair|DNA replication|Nucleotide excision repair|Base excision repair KOG0967 ATP-dependent DNA ligase I [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG1793 DNA ligase Biological Process: single strand break repair (GO:0000012);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA ligase (ATP) activity (GO:0003910);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: DNA replication (GO:0006260);|Biological Process: lagging strand elongation (GO:0006273);|Biological Process: double-strand break repair (GO:0006302);|Biological Process: DNA recombination (GO:0006310);|Biological Process: cell cycle (GO:0007049);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: DNA ligation involved in DNA repair (GO:0051103);|Biological Process: cell division (GO:0051301);|Biological Process: DNA biosynthetic process (GO:0071897);|Biological Process: DNA demethylation (GO:0080111); -- -- TRINITY_DN28581_c0_g1_i15 305.9658766 408.5214587 203.4102945 0.497918262 -1.006019166 3.60E-11 6.06E-10 Down 11.95869 14.6154 15.39308 5.608343 5.344719 5.907906 XP_011097134.1 protein AAR2 homolog [Sesamum indicum] -- -- sind:105176126 K13205 "AAR2, C20orf4" A1 cistron-splicing factor AAR2 -- -- KOG3937 mRNA splicing factor [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification S ENOG410XSI4 AAR2 splicing factor homolog (S. cerevisiae) -- PF05282.10 AAR2 protein TRINITY_DN28582_c0_g5_i1 7.071207005 2.651220853 11.49119316 4.334302494 2.115799844 0.043213512 0.12622038 Up 0.4334191 0.4277273 0.3271907 0.7627829 2.341188 1.709251 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28594_c0_g2_i1 10.34934234 20.69868468 0 0 #NAME? 0.000126303 0.000820208 Down 2.425462 1.590406 5.423313 2.66E-86 7.79E-33 0.007671385 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28594_c0_g3_i1 21.34965679 5.848607346 36.85070624 6.300765988 2.655527229 8.91E-05 0.000597157 Up 2.015443 0.4392928 1.234841 7.559732 6.891568 3.291729 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28596_c1_g2_i1 12.8535377 24.98260493 0.724470471 0.028998996 -5.107853217 5.85E-07 5.82E-06 Down 2.406962 1.940053 3.667441 0 0.1697686 0 PIM98950.1 hypothetical protein CDL12_28560 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28596_c2_g4_i1 11.38700811 22.77401621 0 0 #NAME? 7.85E-08 8.78E-07 Down 1.93623 3.220915 4.05653 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28604_c0_g1_i1 39.7288991 74.99566713 4.462131066 0.059498518 -4.071002451 3.06E-10 4.61E-09 Down 4.491583 6.225931 8.63235 0.3288117 0.3263008 0.3164383 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28604_c0_g2_i1 58.46004924 98.83237848 18.08772 0.183014112 -2.449973197 1.82E-05 0.000140609 Down 14.67126 29.71648 18.7655 2.727158 4.296431 2.145038 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28604_c0_g3_i1 100.587952 165.8715271 35.3043769 0.212841695 -2.2321473 7.25E-16 1.79E-14 Down 14.8886 12.78691 14.49691 2.169732 3.792811 1.300536 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28604_c1_g3_i1 65.38444979 129.6115345 1.15736504 0.008929491 -6.807206333 7.30E-37 5.22E-35 Down 3.674193 3.64545 3.656379 0 0 0.07028596 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28604_c1_g4_i1 10.43022594 18.21477094 2.64568094 0.145249202 -2.783397859 0.0020703 0.009925765 Down 3.736101 3.216934 3.668522 0.4603327 0 0.8312432 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28609_c0_g1_i2 182.6242723 283.5056883 81.74285633 0.288328805 -1.794213121 5.57E-19 1.70E-17 Down 5.210419 5.92661 6.122089 1.576824 1.440374 0.9932321 OTG29595.1 putative ARM repeat superfamily protein [Helianthus annuus] Q5N749|MOR1_ORYSJ Protein MOR1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOR1 PE=2 SV=1 gmx:100778670 K16803 "CKAP5, XMAP215" cytoskeleton-associated protein 5 -- -- KOG1820 Microtubule-associated protein [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton S ENOG410XPTW microtubule binding Cellular Component: kinetochore (GO:0000776);|Cellular Component: spindle pole (GO:0000922);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: centrosome (GO:0005813);|Cellular Component: microtubule (GO:0005874);|Biological Process: spindle organization (GO:0007051);|Biological Process: establishment or maintenance of microtubule cytoskeleton polarity (GO:0030951);|Biological Process: microtubule polymerization (GO:0046785);|Molecular Function: microtubule plus-end binding (GO:0051010);|Biological Process: centrosome duplication (GO:0051298); -- -- TRINITY_DN28610_c0_g5_i1 6.276979888 1.674386165 10.87957361 6.497649013 2.699917815 0.024137439 0.078916074 Up 0 0.5858359 0.4711722 2.190595 0.5639853 2.335911 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2861_c0_g1_i1 3.886837073 7.773674145 0 0 #NAME? 0.005497127 0.022983431 Down 0.9713273 0.9563462 0.530461 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28624_c0_g2_i1 17.5500807 9.296674473 25.80348693 2.775560982 1.472779391 0.017002106 0.059121848 Up 2.830538 1.088066 1.30046 2.448114 3.669558 5.577664 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28625_c1_g2_i1 7.170445869 13.56931504 0.771576693 0.056861875 -4.136394522 0.000984013 0.005146001 Down 0.8063647 1.720197 1.812217 0 4.02E-27 0.2130279 PNT51820.1 hypothetical protein POPTR_002G260700v3 [Populus trichocarpa] Q8H8N3|TYW1_ORYSJ S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Oryza sativa subsp. japonica OX=39947 GN=TYW1 PE=2 SV=1 bvg:104905281 K15449 TYW1 tRNA wybutosine-synthesizing protein 1 -- -- KOG1160 Fe-S oxidoreductase [C] METABOLISM Energy production and conversion C COG0731 radical SAM domain protein "Biological Process: tRNA processing (GO:0008033);|Molecular Function: FMN binding (GO:0010181);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);|Biological Process: oxidation-reduction process (GO:0055114);|Molecular Function: tRNA-4-demethylwyosine synthase activity (GO:0102521);" -- -- TRINITY_DN28630_c0_g2_i3 31.22927499 18.18928597 44.26926401 2.433809886 1.283216478 0.00604584 0.024912746 Up 2.290272 1.270694 1.983053 2.949929 3.810916 4.007007 XP_012852099.1 PREDICTED: heat stress transcription factor B-2a [Erythranthe guttata] -- -- sind:105160500 K09419 HSFF "heat shock transcription factor, other eukaryote" -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28638_c0_g2_i1 365.9417603 488.8599213 243.0235993 0.497123181 -1.008324716 1.82E-12 3.45E-11 Down 14.74723 14.46576 13.41505 6.112633 4.884709 6.1215 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2863_c0_g1_i1 4.096750606 8.193501213 0 0 #NAME? 0.003555746 0.015800878 Down 0.8071627 1.369134 1.525879 0 0 0 BAG73147.1 "ferritin, heavy polypeptide 1, partial [synthetic construct]" Q96540|FRI1_BRANA "Ferritin-1, chloroplastic OS=Brassica napus OX=3708 GN=LSC30 PE=2 SV=1" -- -- -- -- -- -- KOG2332 Ferritin [P] METABOLISM Inorganic ion transport and metabolism P COG1528 "Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis (By similarity)" Molecular Function: ferroxidase activity (GO:0004322);|Biological Process: iron ion transport (GO:0006826);|Biological Process: cellular iron ion homeostasis (GO:0006879);|Molecular Function: ferric iron binding (GO:0008199);|Cellular Component: chloroplast (GO:0009507); PF00210.23 Ferritin-like domain TRINITY_DN2863_c0_g2_i1 4.280563042 8.175337737 0.385788347 0.047189286 -4.405396861 0.011073844 0.041406506 Down 0.7136113 0.9174168 2.158755 0 0 0.2112355 BAG73147.1 "ferritin, heavy polypeptide 1, partial [synthetic construct]" P19976|FRI1_SOYBN "Ferritin-1, chloroplastic OS=Glycine max OX=3847 PE=1 SV=4" -- -- -- -- -- -- KOG2332 Ferritin [P] METABOLISM Inorganic ion transport and metabolism P COG1528 "Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis (By similarity)" Biological Process: response to reactive oxygen species (GO:0000302);|Molecular Function: ferroxidase activity (GO:0004322);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: iron ion transport (GO:0006826);|Biological Process: intracellular sequestering of iron ion (GO:0006880);|Molecular Function: ferrous iron binding (GO:0008198);|Molecular Function: ferric iron binding (GO:0008199);|Biological Process: response to cold (GO:0009409);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: thylakoid (GO:0009579);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to cytokinin (GO:0009735);|Biological Process: flower development (GO:0009908);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: response to iron ion (GO:0010039);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: membrane (GO:0016020);|Biological Process: response to hydrogen peroxide (GO:0042542);|Molecular Function: identical protein binding (GO:0042802);|Biological Process: leaf development (GO:0048366); -- -- TRINITY_DN28641_c0_g1_i3 260.0874433 467.6956423 52.47924425 0.11220811 -3.155751137 1.10E-62 1.60E-60 Down 10.74523 10.67752 10.53373 0.6737935 1.096821 1.119653 EYU43991.1 hypothetical protein MIMGU_mgv1a015249mg [Erythranthe guttata] O50001|PRU1_PRUAR Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZD18 Pathogenesis-related protein Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607); PF00407.18 Pathogenesis-related protein Bet v I family TRINITY_DN28641_c0_g3_i1 13.92550828 27.85101656 0 0 #NAME? 7.54E-05 0.000513432 Down 9.404756 2.711162 3.950727 4.75E-63 0 2.24E-59 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28641_c0_g4_i1 45.99958318 82.36343898 9.63572739 0.116990348 -3.095538586 7.38E-13 1.44E-11 Down 7.085373 10.99182 10.27832 1.038314 0.8576752 0.7563004 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28642_c0_g3_i2 59.59598574 28.78952779 90.40244368 3.140115543 1.650817645 1.43E-06 1.34E-05 Up 3.534213 1.860027 3.239143 6.803637 7.286643 8.056693 XP_012851448.1 "PREDICTED: WAT1-related protein At3g02690, chloroplastic [Erythranthe guttata]" Q93V85|WTR16_ARATH "WAT1-related protein At3g02690, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02690 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- EG COG0697 membrane Cellular Component: chloroplast (GO:0009507);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: chloroplast membrane (GO:0031969); PF00892.19 EamA-like transporter family TRINITY_DN28644_c1_g1_i1 393.1656831 258.7170314 527.6143348 2.03934906 1.028108732 9.58E-14 2.01E-12 Up 12.87272 13.83336 13.73677 23.30076 20.34474 22.95554 PIN19234.1 "SMAD6 interacting protein AMSH, contains JAB/MPN/Mov34 domain [Handroanthus impetiginosus]" Q5PNU3|AMSH3_ARATH AMSH-like ubiquitin thioesterase 3 OS=Arabidopsis thaliana OX=3702 GN=AMSH3 PE=1 SV=2 sind:105178914 K11866 "STAMBP, AMSH" STAM-binding protein ko04144 Endocytosis KOG2880 "SMAD6 interacting protein AMSH, contains JAB/MPN/Mov34 domain" [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG1310 "Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)" Cellular Component: cytoplasm (GO:0005737);|Cellular Component: late endosome (GO:0005770);|Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: endocytosis (GO:0006897);|Biological Process: vacuole organization (GO:0007033);|Molecular Function: metallopeptidase activity (GO:0008237);|Biological Process: protein transport (GO:0015031);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: positive regulation of vacuole organization (GO:0044090);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: intracellular transport (GO:0046907);|Biological Process: protein K63-linked deubiquitination (GO:0070536);|Biological Process: protein K48-linked deubiquitination (GO:0071108);|Biological Process: positive regulation of intracellular protein transport (GO:0090316); PF08969.10 USP8 dimerisation domain TRINITY_DN28644_c2_g5_i1 7.813258964 15.62651793 0 0 #NAME? 0.000311236 0.001851147 Down 3.848971 0.6199982 3.467853 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28646_c2_g1_i1 12.41600187 5.297800118 19.53420362 3.687229263 1.882537122 0.016098395 0.056596485 Up 0.4377572 0.08490172 0.5280825 1.126649 1.420619 0.6677001 XP_012829191.1 PREDICTED: putative late blight resistance protein homolog R1A-10 [Erythranthe guttata] Q60CZ8|R1A10_SOLDE Putative late blight resistance protein homolog R1A-10 OS=Solanum demissum OX=50514 GN=R1A-10 PE=3 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Molecular Function: ADP binding (GO:0043531); PF00931.21 NB-ARC domain TRINITY_DN28651_c1_g2_i1 11.92276335 18.69020953 5.155317161 0.275829822 -1.858149651 0.019746252 0.067106508 Down 1.58819 5.090012 3.490453 1.103003 0.7304115 0.3682799 XP_012854724.1 PREDICTED: F-box/kelch-repeat protein At3g23880-like [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF00646.32,PF12937.6" F-box domain|F-box-like TRINITY_DN28653_c1_g3_i1 4.31652528 8.633050561 0 0 #NAME? 0.002484487 0.011601513 Down 0.8481285 1.165029 1.866579 5.70E-55 9.20E-58 6.64E-56 XP_012857466.1 PREDICTED: aladin [Erythranthe guttata] Q8GWR1|AAAS_ARATH Aladin OS=Arabidopsis thaliana OX=3702 GN=AAAS PE=1 SV=1 sind:105162820 K14320 AAAS aladin ko03013 RNA transport KOG2139 WD40 repeat protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410XNTD "Achalasia, adrenocortical insufficiency, alacrimia" Cellular Component: nuclear envelope (GO:0005635);|Cellular Component: nuclear pore (GO:0005643);|Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: nucleocytoplasmic transport (GO:0006913);|Biological Process: protein transport (GO:0015031);|Biological Process: mRNA transport (GO:0051028); -- -- TRINITY_DN28654_c0_g3_i1 9.678817224 19.35763445 0 0 #NAME? 9.51E-07 9.16E-06 Down 1.157888 2.82077 3.112801 2.03E-30 0.00141271 8.63E-33 XP_011073259.1 "chaperone protein ClpD, chloroplastic [Sesamum indicum]" P42762|CLPD_ARATH "Chaperone protein ClpD, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPD PE=1 SV=1" -- -- -- -- -- -- KOG1051 Chaperone HSP104 and related ATP-dependent Clp proteases [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0542 ATP-dependent CLP protease ATP-binding subunit Molecular Function: ATP binding (GO:0005524);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: chloroplast envelope (GO:0009941);|Molecular Function: ATPase activity (GO:0016887);|Biological Process: protein metabolic process (GO:0019538);|Biological Process: protein hexamerization (GO:0034214);|Molecular Function: protein homodimerization activity (GO:0042803); -- -- TRINITY_DN28657_c0_g1_i3 53.66829936 105.8876578 1.448940942 0.013683757 -6.191391836 1.80E-14 3.96E-13 Down 8.159045 14.33371 8.628428 0 0.3003785 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28657_c0_g3_i1 141.3060424 216.9397869 65.67229793 0.302721317 -1.723937826 2.15E-08 2.60E-07 Down 10.59593 7.44438 7.292544 1.867848 2.352193 2.012942 PWA85312.1 "Zinc finger, C2H2 [Artemisia annua]" Q2V3L3|YY1_ARATH Zinc finger transcription factor YY1 OS=Arabidopsis thaliana OX=3702 GN=YY1 PE=1 SV=1 sind:105172546 K09201 YY transcription factor YY -- -- -- -- -- -- -- S COG5048 Zinc finger protein "Cellular Component: nuclear chromatin (GO:0000790);|Molecular Function: RNA polymerase II proximal promoter sequence-specific DNA binding (GO:0000978);|Molecular Function: RNA polymerase II distal enhancer sequence-specific DNA binding (GO:0000980);|Molecular Function: proximal promoter DNA-binding transcription repressor activity, RNA polymerase II-specific (GO:0001078);|Molecular Function: RNA polymerase II repressing transcription factor binding (GO:0001103);|Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Cellular Component: transcription factor complex (GO:0005667);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: defense response (GO:0006952);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to light stimulus (GO:0009416);|Biological Process: response to absence of light (GO:0009646);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);|Cellular Component: PcG protein complex (GO:0031519);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: regulation of defense response to fungus (GO:1900150);|Biological Process: regulation of response to salt stress (GO:1901000);" -- -- TRINITY_DN28657_c0_g5_i1 117.8989374 174.7595497 61.03832516 0.349270327 -1.517584012 7.04E-06 5.85E-05 Down 13.91717 18.70589 12.24942 4.618396 2.277616 5.764534 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28666_c0_g3_i1 18.50964063 30.68022932 6.339051946 0.206616837 -2.274970271 0.000450543 0.002573813 Down 3.129215 2.516493 2.551417 0.9343889 0 0.4137522 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28671_c0_g1_i1 8.864115408 14.64192404 3.086306774 0.210785602 -2.24615177 0.015412299 0.054605877 Down 1.913626 1.838184 3.998494 0 1.31E-54 1.276097 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28672_c0_g1_i1 18.71258528 28.56629381 8.858876748 0.310116419 -1.689118183 0.007573071 0.030170653 Down 3.669435 2.88941 2.629499 0.8295919 0.9532179 0.5379736 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28678_c1_g2_i1 98.11511733 134.5217879 61.70844682 0.458724552 -1.12429997 0.003393835 0.01519236 Down 4.30963 3.040719 2.330576 1.03703 1.27922 1.271648 XP_019181774.1 PREDICTED: uncharacterized protein LOC109176829 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- U ENOG410XRCG USO1 vesicle docking protein homolog (yeast) -- "PF08284.10,PF13975.5,PF13650.5,PF03732.16" Retroviral aspartyl protease|gag-polyprotein putative aspartyl protease|Aspartyl protease|Retrotransposon gag protein TRINITY_DN28678_c1_g5_i2 20.15014319 29.7362011 10.56408528 0.355260083 -1.493052497 0.010367563 0.039221169 Down 4.15049 4.994588 4.834917 0.5157138 1.003487 2.554824 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28678_c1_g7_i1 14.21084649 21.97296605 6.44872692 0.293484589 -1.768643344 0.015037421 0.05346547 Down 3.658273 1.661814 4.42609 0.8207903 0 1.505107 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28687_c1_g5_i1 6.045360478 10.58939984 1.501321113 0.141775845 -2.818316337 0.038360678 0.114672787 Down 1.637592 0.4710547 3.17061 0.2077201 0.2132356 0.2400069 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28697_c0_g1_i3 554.3327623 331.0012584 777.6642662 2.349429939 1.232310746 2.64E-25 1.17E-23 Up 7.358904 6.505373 5.841543 12.72269 12.38753 12.23683 XP_011082789.1 probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Sesamum indicum] C0LGN2|Y3148_ARATH Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana OX=3702 GN=LRR-RLK PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF00069.24,PF07714.16,PF11721.7,PF13855.5,PF00560.32,PF12799.6" Protein kinase domain|Protein tyrosine kinase|Di-glucose binding within endoplasmic reticulum|Leucine rich repeat|Leucine Rich Repeat|Leucine Rich repeats (2 copies) TRINITY_DN286_c0_g1_i1 6.208304179 0.870218398 11.54638996 13.26838181 3.729920528 0.003651686 0.016184437 Up 0 0.3999403 0.1548408 1.785817 1.364018 1.83104 XP_011100775.1 bZIP transcription factor 53-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00170.20 bZIP transcription factor TRINITY_DN28700_c0_g2_i4 43.52339098 58.92735766 28.11942431 0.477187938 -1.067370518 0.006074442 0.025019251 Down 3.716147 6.095274 5.837058 1.41936 2.809406 1.749876 PIN24371.1 Phosphoprotein phosphatase [Handroanthus impetiginosus] Q9ZV25|P2C23_ARATH Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana OX=3702 GN=PLL4 PE=2 SV=1 -- -- -- -- -- -- KOG0700 Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0631 Phosphatase Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);|Cellular Component: nucleus (GO:0005634);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: leaf development (GO:0048366); -- -- TRINITY_DN28701_c1_g1_i2 812.3224818 1155.376339 469.2686248 0.40616084 -1.299876945 7.18E-36 4.95E-34 Down 129.0915 141.8081 144.4776 51.03685 42.25522 42.72488 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28701_c1_g2_i10 84.51921645 131.5041978 37.53423513 0.285422335 -1.808829863 7.68E-10 1.10E-08 Down 4.88216 5.531957 4.330104 0.9175178 1.272981 1.20927 XP_015574659.1 uncharacterized protein LOC107261244 [Ricinus communis] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN28705_c0_g2_i2 25.23908564 40.87372826 9.604443014 0.234978394 -2.089399988 0.000130193 0.000843423 Down 3.989994 3.878678 3.977135 1.097812 0.6341707 0.4912362 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28712_c0_g1_i5 9.858734909 18.56010478 1.15736504 0.062357678 -4.003288979 0.000137552 0.000886663 Down 1.240279 0.66797 0.7604513 0 0 0.1287033 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28713_c0_g3_i1 5.716707525 11.43341505 0 0 #NAME? 0.00044341 0.002536571 Down 2.757271 2.663398 0.6153259 4.33E-74 3.22E-71 2.59E-54 XP_019154135.1 PREDICTED: uncharacterized protein LOC109150621 [Ipomoea nil] -- -- -- -- -- -- -- -- KOG0167 FOG: Armadillo/beta-catenin-like repeats [S] POORLY CHARACTERIZED Function unknown S ENOG410XRTN U-box domain-containing protein -- -- -- TRINITY_DN28723_c0_g2_i1 37.58729545 69.86776649 5.306824409 0.075955261 -3.718706302 0.003105887 0.01407884 Down 6.131843 3.481339 13.7959 4.69E-30 0.4142577 1.07208 XP_012852791.1 PREDICTED: uncharacterized protein LOC105972386 isoform X2 [Erythranthe guttata] -- -- -- -- -- -- -- -- KOG1454 Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [R] POORLY CHARACTERIZED General function prediction only S ENOG410XP0Y alpha/beta hydrolase fold -- -- -- TRINITY_DN28723_c1_g2_i1 14.84267701 23.88959026 5.795763768 0.242606244 -2.043311412 0.014390147 0.051600595 Down 6.075924 3.293747 3.674402 0 2.517851 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28730_c0_g1_i1 46275.22716 5.108931405 92545.34539 18114.42317 14.14485125 0 0 Up 0.0304787 0.04690673 0.01823096 487.5003 476.1151 478.0784 ASG92143.1 polyprotein [Cloning vector pLX-PPV] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF00851.17,PF00680.19,PF00767.17,PF08440.9,PF00863.18,PF13608.5,PF01577.15,PF00271.30,PF07652.13,PF00270.28" Helper component proteinase|RNA dependent RNA polymerase|Potyvirus coat protein|Potyviridae polyprotein|Peptidase family C4|Protein P3 of Potyviral polyprotein|Potyvirus P1 protease|Helicase conserved C-terminal domain|Flavivirus DEAD domain|DEAD/DEAH box helicase TRINITY_DN28734_c0_g1_i8 286.5945783 564.5251859 8.663970607 0.015347359 -6.025865789 1.38E-137 5.39E-135 Down 33.00485 39.00963 36.40992 0.2568536 0.253572 0.7987926 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28741_c0_g2_i11 20.25853111 36.79768078 3.719381433 0.101076518 -3.306480228 1.00E-06 9.61E-06 Down 3.218455 2.816677 2.07436 0.3314133 0.1108922 0.2434111 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28741_c0_g4_i1 12.45912135 19.46889233 5.449350379 0.279900381 -1.837014645 0.018937188 0.064803301 Down 1.75541 3.767431 3.221833 0.3898559 1.569804 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28742_c0_g3_i7 46.04074033 70.75558733 21.32589333 0.301402252 -1.7302379 8.99E-06 7.34E-05 Down 4.675979 2.869763 4.248014 0.8224454 0.7426648 1.307907 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28742_c0_g4_i1 58.21803983 78.04378666 38.39229301 0.49193273 -1.02346705 0.00296625 0.013526924 Down 4.548015 3.673141 3.228295 1.336876 1.410405 1.805019 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28746_c1_g4_i1 29.50967839 42.70062137 16.31873541 0.382166228 -1.387727801 0.003638175 0.016127703 Down 2.443647 4.647959 4.518548 1.849573 0.7536253 0.9457267 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28746_c1_g6_i1 39.70031141 56.94708221 22.45354062 0.394287815 -1.342678968 0.00126922 0.006445926 Down 4.374876 6.068848 5.773728 2.692987 1.764699 0.7327535 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28759_c0_g1_i1 32.24265596 51.43268621 13.05262571 0.253780751 -1.978345451 4.29E-05 0.000307598 Down 10.95281 13.23113 7.562131 0.7174171 2.824592 2.923505 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28764_c0_g1_i6 29.22380102 42.97146198 15.47614006 0.360149256 -1.473333171 0.002973836 0.013554709 Down 2.832183 3.106324 2.57122 0.8222103 1.115413 0.4986918 XP_016436137.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Nicotiana tabacum] Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); "PF13855.5,PF12799.6,PF08263.11" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine rich repeat N-terminal domain TRINITY_DN28764_c0_g3_i2 397.5765841 179.8271794 615.3259888 3.421763 1.774739839 1.29E-36 9.16E-35 Up 4.265791 3.237059 3.751113 9.38758 11.27003 10.43627 XP_012833553.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Erythranthe guttata] Q2R2D5|XA21_ORYSJ Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: cortical endoplasmic reticulum (GO:0032541);|Cellular Component: perinuclear endoplasmic reticulum membrane (GO:1990578); "PF13855.5,PF07714.16,PF00069.24,PF12799.6,PF00560.32,PF08263.11" Leucine rich repeat|Protein tyrosine kinase|Protein kinase domain|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine rich repeat N-terminal domain TRINITY_DN28764_c0_g5_i1 110.6413019 43.20706193 178.0755419 4.12144529 2.043150344 9.79E-16 2.38E-14 Up 0.5898903 0.9500623 0.5667486 2.150539 2.37383 2.458894 OMO73140.1 "Integrase, catalytic core [Corchorus capsularis]" Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF07727.13,PF14223.5,PF00665.25,PF14244.5,PF13976.5" Reverse transcriptase (RNA-dependent DNA polymerase)|gag-polypeptide of LTR copia-type|Integrase core domain|gag-polypeptide of LTR copia-type|GAG-pre-integrase domain TRINITY_DN28765_c4_g1_i1 83.90295249 112.4076831 55.39822193 0.492833056 -1.02082907 0.000414948 0.002395488 Down 8.104091 7.564055 5.879795 2.159669 3.314243 3.159605 XP_023752668.1 uncharacterized protein LOC111901034 [Lactuca sativa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBST Mariner sub-class -- -- -- TRINITY_DN28765_c5_g3_i1 4.588268147 9.176536295 0 0 #NAME? 0.001955989 0.009441534 Down 1.589803 1.165844 0.9430545 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28768_c0_g1_i2 27.94745686 55.89491371 0 0 #NAME? 2.89E-18 8.44E-17 Down 3.561806 4.28338 5.553334 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28768_c0_g2_i1 59.52843956 109.2538226 9.803056484 0.089727355 -3.478308313 6.62E-19 2.02E-17 Down 9.30934 9.219698 10.27212 0.4351577 0.4198153 1.225179 EPS68843.1 "hypothetical protein M569_05925, partial [Genlisea aurea]" P53303|ZPR1_YEAST Zinc finger protein ZPR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ZPR1 PE=1 SV=1 sind:105175861 K06874 K06874 zinc finger protein -- -- KOG2703 C4-type Zn-finger protein [R] POORLY CHARACTERIZED General function prediction only S COG1779 zinc ion binding Biological Process: G2/M transition of mitotic cell cycle (GO:0000086);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: cellular response to starvation (GO:0009267);|Biological Process: response to glucose (GO:0009749);|Molecular Function: translation elongation factor binding (GO:0061770); -- -- TRINITY_DN28770_c0_g1_i1 40.21939953 25.41791557 55.02088348 2.164649706 1.11413358 0.007177734 0.028854226 Up 1.18504 1.536086 1.69869 2.726988 2.398417 2.626833 XP_011071055.1 metalloendoproteinase 2-MMP [Sesamum indicum] O04529|2MMP_ARATH Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1 -- -- -- -- -- -- KOG1565 Gelatinase A and related matrix metalloproteases [OW] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones |Extracellular structures " O ENOG410XQ5D matrix metallopeptidase "Molecular Function: metalloendopeptidase activity (GO:0004222);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: multicellular organism development (GO:0007275);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to jasmonic acid (GO:0009753);|Cellular Component: extracellular matrix (GO:0031012);|Cellular Component: anchored component of membrane (GO:0031225);|Biological Process: response to cadmium ion (GO:0046686);|Biological Process: developmental vegetative growth (GO:0080186);|Biological Process: negative regulation of leaf senescence (GO:1900056);|Biological Process: regulation of photoperiodism, flowering (GO:2000028);" PF00413.23 Matrixin TRINITY_DN2877_c0_g1_i1 6.604670535 11.73930433 1.470036737 0.125223497 -2.997422803 0.014038881 0.050556677 Down 1.847798 2.646141 1.051408 0.5055563 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28783_c0_g1_i2 166.5026615 318.9443823 14.06094081 0.044085871 -4.503539835 7.99E-65 1.21E-62 Down 28.15226 23.66985 24.54845 0.525042 1.378639 0.8537814 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28785_c0_g1_i8 1986.571168 1203.490291 2769.652046 2.301349722 1.202480238 4.13E-54 5.09E-52 Up 21.03284 21.98219 21.15164 39.58111 39.86903 39.72041 XP_020548735.1 "probable plastid-lipid-associated protein 14, chloroplastic isoform X1 [Sesamum indicum]" Q9LV04|PAP14_ARATH "Probable plastid-lipid-associated protein 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP14 PE=1 SV=1" -- -- -- -- -- -- KOG0594 Protein kinase PCTAIRE and related kinases [R] POORLY CHARACTERIZED General function prediction only T ENOG410XPP3 Cyclin-Dependent Kinase Molecular Function: cyclin-dependent protein serine/threonine kinase activity (GO:0004693);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein phosphorylation (GO:0006468);|Cellular Component: chloroplast (GO:0009507); -- -- TRINITY_DN28791_c3_g3_i1 10.25456578 17.59015388 2.918977679 0.16594384 -2.59123302 0.003833361 0.0168742 Down 1.33644 3.449466 4.088599 0.5553685 0.5520816 1.80E-27 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28791_c4_g1_i1 24.26013067 43.30483274 5.215428597 0.120435256 -3.053670315 3.66E-07 3.75E-06 Down 4.953907 3.782077 3.434142 0.4296745 0.2938743 0.4483882 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28792_c2_g1_i4 172.6959916 329.3806454 16.01133766 0.048610439 -4.362590037 2.74E-65 4.20E-63 Down 7.662014 7.599292 8.242086 0.4209688 0.1876617 0.3076851 XP_023760264.1 uncharacterized protein LOC111908693 [Lactuca sativa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBST Mariner sub-class -- -- -- TRINITY_DN28793_c0_g3_i1 25.81676194 48.70681494 2.926708944 0.060088284 -4.05677246 1.73E-10 2.68E-09 Down 3.216506 5.545646 5.066853 0.1070588 0.5189942 0.1177715 PIN14491.1 "Glucan endo-1,3-beta-D-glucosidase [Handroanthus impetiginosus]" Q93Z08|E136_ARATH "Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana OX=3702 GN=At5g58090 PE=2 SV=2" sind:105176491 K19893 GN5_6 "glucan endo-1,3-beta-glucosidase 5/6" ko00500 Starch and sucrose metabolism -- -- -- -- -- G ENOG410YE7X "glucan endo-1,3-beta-glucosidase" "Cellular Component: plasma membrane (GO:0005886);|Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: defense response (GO:0006952);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: anchored component of membrane (GO:0031225);|Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);|Cellular Component: anchored component of plasma membrane (GO:0046658);" -- -- TRINITY_DN28794_c0_g1_i1 59.45485073 98.81799715 20.09170432 0.203320295 -2.298173867 0.001627104 0.008029912 Down 31.51176 16.11439 15.38339 5.950421 4.311794 0.00254168 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28797_c0_g2_i1 205.787576 409.3440864 2.231065533 0.005450343 -7.519437353 9.32E-79 1.84E-76 Down 29.5847 23.30426 29.91525 0.09663276 0.09590743 0.1001673 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN287_c0_g1_i2 25.27405267 50.54810534 0 0 #NAME? 1.79E-16 4.61E-15 Down 4.623773 5.55728 5.349693 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28801_c0_g2_i2 1804.858641 3242.183429 367.5338519 0.113359981 -3.141016673 1.79E-90 4.11E-88 Down 455.1189 541.9656 463.1427 40.54605 44.64901 48.49454 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28802_c0_g1_i3 232.8220078 418.0091555 47.6348601 0.113956499 -3.133444885 2.16E-56 2.80E-54 Down 6.648905 6.713345 6.956995 0.7609504 0.4691087 0.6376733 XP_011082883.1 uncharacterized protein LOC105165535 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YAWI NA -- -- -- TRINITY_DN28807_c2_g3_i1 14.34269252 21.6295939 7.055791152 0.326210061 -1.616126815 0.022923085 0.075665184 Down 2.571793 3.003272 3.029046 1.816394 1.47E-10 0.4521389 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28807_c4_g1_i1 23.90194981 38.23883156 9.565068056 0.250140176 -1.999191302 0.028789804 0.09124812 Down 3.989853 4.479831 1.051572 0.7080034 0.8827332 0.3319476 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28809_c0_g1_i2 18.81346532 37.62693064 0 0 #NAME? 2.04E-12 3.84E-11 Down 5.429728 3.498014 4.813319 3.83E-54 1.58E-59 1.56E-74 -- -- P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Biological Process: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: mRNA 3'-UTR binding (GO:0003730);|Molecular Function: translation initiation factor activity (GO:0003743);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: translational initiation (GO:0006413);|Biological Process: regulation of translational initiation (GO:0006446);|Molecular Function: poly(A) binding (GO:0008143);|Molecular Function: poly(U) RNA binding (GO:0008266);|Biological Process: response to salt stress (GO:0009651);|Biological Process: viral process (GO:0016032);|Biological Process: regulation of nuclear-transcribed mRNA poly(A) tail shortening (GO:0060211);|Biological Process: regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (GO:1900151);|Cellular Component: ribonucleoprotein complex (GO:1990904);" -- -- TRINITY_DN28812_c0_g2_i1 19.01097621 3.74819372 34.2737587 9.144073454 3.192836993 1.08E-06 1.03E-05 Up 1.484891 1.48E-25 0.2267769 2.505989 4.76412 4.991284 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28812_c0_g4_i1 21.41218342 34.37165559 8.45271124 0.24592098 -2.023733273 0.00907148 0.035143951 Down 6.928674 5.968213 3.804796 3.313234 2.11E-12 0.000456825 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28814_c0_g3_i1 13.70690456 26.66051159 0.753297531 0.028255179 -5.145340853 2.39E-07 2.52E-06 Down 2.706254 2.339213 2.594732 0.1182227 0 0.1313843 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28816_c0_g2_i1 12.15403696 23.53649722 0.771576693 0.032782138 -4.930946254 1.74E-06 1.60E-05 Down 1.570037 2.246395 2.182659 0 0 0.1489791 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28816_c0_g3_i1 115.0866985 75.18625184 154.9871452 2.061376135 1.043607774 1.56E-05 0.000121783 Up 9.095257 6.53872 8.421368 13.72743 14.22945 12.07445 XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28816_c0_g5_i2 205.6552716 54.92776508 356.3827782 6.488208243 2.697820125 8.40E-42 7.07E-40 Up 1.538718 3.316356 2.153193 12.60345 11.05777 12.92798 XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN28816_c1_g1_i1 48.28601349 2.460390456 94.11163653 38.25069159 5.257413928 2.96E-24 1.24E-22 Up 0 0 1.604538 16.1541 14.63226 16.91046 XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28824_c0_g2_i1 5.999703601 10.84204216 1.15736504 0.106747882 -3.227720646 0.012672373 0.046390083 Down 1.432949 2.476997 0.8335139 0 0 0.340269 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2882_c0_g1_i1 2.931625167 5.863250333 0 0 #NAME? 0.022264584 0.073932424 Down 0.6887773 0.34184 2.158233 0 0 0 XP_022014975.1 uncharacterized protein LOC110914494 [Helianthus annuus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28837_c0_g3_i1 13.13853802 20.34490824 5.932167804 0.291579973 -1.77803646 0.015293287 0.054230777 Down 2.954332 1.730297 4.492687 1.056083 0.5335595 0.530907 XP_018484585.1 "PREDICTED: heat shock protein 90-5, chloroplastic-like [Raphanus sativus]" Q9SIF2|HS905_ARATH "Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1" gmx:100785017 K09487 "HSP90B, TRA1" heat shock protein 90kDa beta ko04141|ko04626 Protein processing in endoplasmic reticulum|Plant-pathogen interaction KOG0019 Molecular chaperone (HSP90 family) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0326 Molecular chaperone. Has ATPase activity (By similarity) Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: protein folding (GO:0006457);|Biological Process: response to heat (GO:0009408);|Biological Process: response to water deprivation (GO:0009414);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid (GO:0009536);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: response to salt stress (GO:0009651);|Biological Process: de-etiolation (GO:0009704);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: response to chlorate (GO:0010157);|Molecular Function: protein homodimerization activity (GO:0042803);|Biological Process: protein import into chloroplast stroma (GO:0045037);|Molecular Function: unfolded protein binding (GO:0051082); -- -- TRINITY_DN28849_c1_g1_i1 137.8127099 84.55190254 191.0735174 2.259836995 1.176218713 2.51E-07 2.63E-06 Up 12.02749 13.45578 18.87089 31.05629 25.42326 24.41111 PIN15931.1 hypothetical protein CDL12_11423 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YV9T NA -- -- -- TRINITY_DN28849_c2_g1_i3 50.71201649 82.88723725 18.53679573 0.223638721 -2.160758095 1.56E-08 1.92E-07 Down 6.067062 6.000693 7.270177 1.847062 0.7756728 0.8569371 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28851_c0_g3_i3 538.9734082 350.9655922 726.9812243 2.071374632 1.050588505 1.83E-18 5.41E-17 Up 37.47015 36.82229 34.58923 62.39887 62.28628 57.25507 XP_011077684.1 mitochondrial import receptor subunit TOM7-1-like [Sesamum indicum] O82067|TOM7A_SOLTU Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum OX=4113 GN=TOM7-1 PE=3 SV=3 sind:105161634 K17771 TOM7 mitochondrial import receptor subunit TOM7 -- -- -- -- -- -- -- U ENOG410Y3Q1 Mitochondrial import receptor subunit Cellular Component: mitochondrial outer membrane translocase complex (GO:0005742);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein import into mitochondrial matrix (GO:0030150); -- -- TRINITY_DN28851_c0_g5_i1 10.94589396 4.651218581 17.24056934 3.706677946 1.890126772 0.041019154 0.12104157 Up 0.75024 1.091315 0.847765 3.942262 3.404389 0.6785861 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28857_c0_g2_i1 14.54362987 23.37355118 5.713708551 0.244451881 -2.032377588 0.005195495 0.021883558 Down 4.430228 5.166216 2.52647 0.6312133 0 1.786587 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28857_c0_g4_i1 19.43461128 8.817680565 30.051542 3.408100552 1.768967901 0.003783796 0.016683619 Up 0.403636 0.9757475 0.9203539 2.442752 1.949398 1.874554 PIN20423.1 hypothetical protein CDL12_06893 [Handroanthus impetiginosus] A0A1X9PY88|ERN1_LOTJA Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1 sind:105159638 K09286 EREBP EREBP-like factor -- -- -- -- -- -- -- K ENOG410YGKR Transcription factor "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: nodulation (GO:0009877);" PF00847.19 AP2 domain TRINITY_DN28857_c1_g1_i1 8.216104838 16.43220968 0 0 #NAME? 9.28E-06 7.55E-05 Down 1.347491 2.424382 1.942684 0 9.23E-64 4.94E-101 XP_026424388.1 ethylene-responsive transcription factor ERN1-like [Papaver somniferum] A2Q5W1|ERN1_MEDTR Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1 vra:106759573 K09286 EREBP EREBP-like factor -- -- -- -- -- -- -- K ENOG410YGKR Transcription factor "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: nodulation (GO:0009877);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);" -- -- TRINITY_DN28858_c0_g1_i2 23.92132951 32.55896777 15.28369124 0.469415718 -1.091061944 0.045755447 0.132022438 Down 3.558123 3.025581 2.359373 0.4729812 1.396944 1.444998 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2885_c0_g1_i1 7.529409293 13.5156652 1.543153387 0.114175171 -3.130679143 0.005011264 0.021244373 Down 1.535698 1.322165 1.167075 0 0 0.355327 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28874_c0_g2_i1 9.984331615 2.21435141 17.75431182 8.017838423 3.003213344 0.002174835 0.010346079 Up 0 0 1.217231 2.627362 3.340569 2.080384 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28880_c0_g1_i1 31.1756658 46.93441227 15.41691932 0.328477946 -1.606131585 0.003263489 0.01468087 Down 7.087536 8.7865 5.006184 0 2.149757 3.446325 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28880_c0_g2_i1 19.93595348 32.16266399 7.709242972 0.239695411 -2.060725805 0.000916051 0.004827453 Down 5.405273 3.768207 4.150621 0.7529416 1.46226 0.3731482 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28881_c0_g1_i1 8.078941463 2.120135906 14.03774702 6.621154324 2.727082757 0.006280597 0.025712045 Up 0.6500657 0 0.2525494 2.099745 1.710766 1.087923 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28888_c0_g2_i1 20.11242596 30.5968558 9.627996125 0.314672729 -1.66807594 0.009051755 0.03507951 Down 8.966554 6.551027 3.478088 2.365457 1.176962 1.167614 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28895_c0_g1_i3 240.4353742 133.7970006 347.0737478 2.594032349 1.375196471 9.48E-16 2.31E-14 Up 7.295589 7.687954 6.096679 13.3699 14.69609 16.02466 XP_011094929.1 uncharacterized protein LOC105174502 isoform X1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZE5B NA -- -- -- TRINITY_DN28895_c1_g1_i5 128.6541551 196.8011588 60.5071515 0.307453228 -1.701561142 5.04E-13 9.98E-12 Down 7.533485 7.19825 8.626265 2.193903 1.778441 1.813669 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28895_c1_g4_i2 28.57694848 47.50762168 9.646275288 0.2030469 -2.300115097 1.18E-05 9.47E-05 Down 2.344483 2.369098 1.555101 0.4520002 0.2745377 0.3095657 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN288_c0_g1_i1 15.90973414 26.11630763 5.703160654 0.218375459 -2.195117363 0.003248468 0.014627288 Down 2.624866 3.951335 1.654945 0.1809276 0.1785032 1.052752 PIN02853.1 Glucose-6-phosphate 1-dehydrogenase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28903_c0_g1_i10 246.1733558 372.8158098 119.5309017 0.320616504 -1.641079401 6.27E-21 2.19E-19 Down 11.76384 9.380245 10.47716 2.870126 2.711848 2.609753 PIN15674.1 AAA+-type ATPase containing the peptidase M41 domain [Handroanthus impetiginosus] Q1PDW5|FTSH6_ARATH "ATP-dependent zinc metalloprotease FTSH 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSH6 PE=2 SV=1" sind:105176782 K03798 "ftsH, hflB" cell division protease FtsH -- -- KOG0731 AAA+-type ATPase containing the peptidase M41 domain [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0465 "Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)" Molecular Function: ATP-dependent peptidase activity (GO:0004176);|Molecular Function: metalloendopeptidase activity (GO:0004222);|Molecular Function: ATP binding (GO:0005524);|Biological Process: proteolysis (GO:0006508);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: thylakoid membrane organization (GO:0010027);|Biological Process: photoinhibition (GO:0010205);|Biological Process: photosystem II repair (GO:0010206);|Biological Process: PSII associated light-harvesting complex II catabolic process (GO:0010304);|Cellular Component: integral component of membrane (GO:0016021); "PF00004.28,PF01434.17,PF06068.12" ATPase family associated with various cellular activities (AAA)|Peptidase family M41|TIP49 C-terminus TRINITY_DN28908_c0_g4_i1 30.83859306 47.09159562 14.58559051 0.309728102 -1.69092581 0.000437859 0.002508927 Down 5.135284 5.296371 4.511361 0.9974454 0.9848624 1.663517 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28935_c0_g2_i1 17.04199099 30.0023653 4.081616668 0.136043163 -2.877863642 0.000367224 0.002144252 Down 2.799906 4.744809 1.854489 0.5033277 0.2556851 0.2821282 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28940_c2_g2_i1 13.37204798 26.37658679 0.367509184 0.013933159 -6.165333773 5.19E-08 5.95E-07 Down 3.013195 2.91738 4.301923 0.09467572 2.67E-64 0.01928647 PSR91221.1 Endonuclease/exonuclease/phosphatase protein [Actinidia chinensis var. chinensis] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111SG9 Reverse transcriptase (RNA-dependent DNA polymerase) -- -- -- TRINITY_DN28940_c2_g3_i1 49.35850169 29.8381758 68.87882757 2.308412821 1.206901249 0.001215047 0.006206912 Up 1.951739 1.635663 2.184467 2.807715 3.748815 4.16159 XP_011102248.1 uncharacterized protein LOC105180271 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111SG9 Reverse transcriptase (RNA-dependent DNA polymerase) -- -- -- TRINITY_DN28940_c2_g5_i1 4.720939379 8.706860388 0.735018369 0.084418302 -3.566300381 0.023351492 0.07680005 Down 1.908673 0.2038147 1.287466 0.1940883 0 0 XP_011102248.1 uncharacterized protein LOC105180271 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28942_c0_g1_i1 143.3844702 49.16452777 237.6044126 4.832842365 2.272871938 5.70E-23 2.22E-21 Up 0.5060658 0.8644129 0.7471904 2.726354 2.84984 2.68778 XP_011081908.1 pleiotropic drug resistance protein 1-like isoform X2 [Sesamum indicum] Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum OX=4097 GN=PDR1 PE=2 SV=1 -- -- -- -- -- -- KOG0065 "Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG0842 (ABC) transporter Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887); "PF01061.23,PF00005.26,PF08370.10,PF14510.5,PF13304.5,PF13481.5" "ABC-2 type transporter|ABC transporter|Plant PDR ABC transporter associated|ABC-transporter extracellular N-terminal|AAA domain, putative AbiEii toxin, Type IV TA system|AAA domain" TRINITY_DN28952_c0_g4_i2 53.83893734 78.07151383 29.60636085 0.379221042 -1.398889076 0.000415365 0.002397592 Down 5.928672 6.31384 6.017558 3.558558 0.8583915 1.075284 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28952_c0_g5_i2 48.51271404 28.99500118 68.0304269 2.346281226 1.230375945 0.000957563 0.005025047 Up 3.433979 2.369166 3.574618 6.174675 7.080656 4.542564 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28952_c0_g6_i1 42.44412935 66.66449398 18.22376471 0.27336538 -1.87109755 0.004503888 0.01938786 Down 14.49415 5.210777 10.24307 1.822182 2.398824 2.36088 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28954_c0_g1_i1 141.6444072 251.0431246 32.24568989 0.128446815 -2.960756973 4.07E-33 2.56E-31 Down 3.415522 2.842397 3.213756 0.3017164 0.3849624 0.2942762 KOM49767.1 hypothetical protein LR48_Vigan08g059400 [Vigna angularis] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" "PF00078.26,PF08284.10,PF13975.5,PF13650.5,PF03732.16,PF00385.23" Reverse transcriptase (RNA-dependent DNA polymerase)|Retroviral aspartyl protease|gag-polyprotein putative aspartyl protease|Aspartyl protease|Retrotransposon gag protein|Chromo (CHRromatin Organisation MOdifier) domain TRINITY_DN28957_c0_g3_i1 58.59993694 113.1572729 4.042601028 0.035725508 -4.806901674 1.50E-09 2.09E-08 Down 20.49304 9.898516 22.30064 1.576622 2.47E-19 1.01E-20 XP_019184639.1 PREDICTED: uncharacterized protein LOC109179592 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28957_c0_g5_i3 101.5113323 193.3190944 9.703570091 0.050194577 -4.316324697 1.91E-39 1.50E-37 Down 7.962154 10.38695 9.478284 0.2024793 0.4016959 0.4913551 XP_019184639.1 PREDICTED: uncharacterized protein LOC109179592 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF13960.5 Domain of unknown function (DUF4218) TRINITY_DN28961_c0_g1_i4 121.326886 208.6290383 34.0247337 0.163087238 -2.6162842 4.73E-24 1.96E-22 Down 5.963636 5.967571 5.379533 0.8907584 0.4404599 0.9679585 XP_015382204.1 uncharacterized protein LOC107175308 [Citrus sinensis] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- "PF08284.10,PF03732.16,PF13975.5,PF13650.5" Retroviral aspartyl protease|Retrotransposon gag protein|gag-polyprotein putative aspartyl protease|Aspartyl protease TRINITY_DN28961_c0_g2_i1 3.651780268 7.303560535 0 0 #NAME? 0.016472529 0.057660204 Down 0 1.88071 2.639059 0 0 0 XP_024955869.1 uncharacterized protein LOC112498643 [Citrus sinensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28964_c1_g1_i8 83.64638123 40.22714673 127.0656157 3.158703166 1.659332369 7.31E-09 9.37E-08 Up 1.204026 1.414607 1.186897 2.859857 3.487842 3.365039 KZV50273.1 hypothetical protein F511_23259 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41107J4 C1 domain -- "PF03107.15,PF00130.21,PF13832.5,PF00628.28" C1 domain|Phorbol esters/diacylglycerol binding domain (C1 domain)|PHD-zinc-finger like domain|PHD-finger TRINITY_DN28972_c0_g1_i17 554.3351834 821.0525451 287.6178216 0.350303794 -1.513321482 1.49E-35 1.02E-33 Down 22.60083 25.00232 24.93651 6.635865 6.45404 7.417627 PIN11180.1 Mitochondrial polypeptide chain release factor [Handroanthus impetiginosus] Q8RX79|APG3_ARATH "Peptide chain release factor APG3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APG3 PE=2 SV=1" sind:105163173 K02835 "prfA, MTRF1, MRF1" peptide chain release factor 1 -- -- KOG2726 Mitochondrial polypeptide chain release factor [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0216 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (By similarity) "Molecular Function: translation release factor activity (GO:0003747);|Biological Process: translational termination (GO:0006415);|Cellular Component: chloroplast (GO:0009507);|Biological Process: chloroplast organization (GO:0009658);|Biological Process: thylakoid membrane organization (GO:0010027);|Molecular Function: translation release factor activity, codon specific (GO:0016149);|Biological Process: plastid translation (GO:0032544);|Biological Process: regulation of growth (GO:0040008);" PF03462.17 PCRF domain TRINITY_DN28973_c0_g1_i1 156.7480356 71.19662584 242.2994454 3.403243378 1.766910327 3.80E-16 9.54E-15 Up 1.198043 1.786262 1.377236 4.624082 3.719797 3.614086 XP_012845502.1 PREDICTED: receptor-like protein kinase HSL1 [Erythranthe guttata] Q9M0G7|MIK1_ARATH MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF00069.24,PF13855.5,PF07714.16,PF12799.6,PF00560.32,PF08263.11" Protein kinase domain|Leucine rich repeat|Protein tyrosine kinase|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine rich repeat N-terminal domain TRINITY_DN28991_c0_g1_i2 9.718927765 19.07034635 0.367509184 0.019271238 -5.697406931 1.07E-05 8.58E-05 Down 3.031373 2.130618 1.682765 0.1118059 3.64E-50 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28991_c0_g2_i2 43.09737201 72.53259677 13.66214725 0.188358722 -2.408445253 1.05E-08 1.32E-07 Down 3.5908 5.155683 5.829908 0.5584348 1.104644 0.6015858 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28994_c0_g2_i1 18.76315382 29.22175564 8.304552004 0.284190728 -1.81506861 0.005128226 0.021646415 Down 8.173994 3.485143 6.558071 1.824399 7.37E-07 2.426946 XP_011099764.1 LOW QUALITY PROTEIN: uncharacterized protein LOC105178099 [Sesamum indicum] A0A1P8AWH8|XYN1_ARATH "Endo-1,4-beta-xylanase 1 OS=Arabidopsis thaliana OX=3702 GN=XYN1 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: endo-1,4-beta-xylanase activity (GO:0031176);|Biological Process: xylan catabolic process (GO:0045493);" -- -- TRINITY_DN28996_c0_g2_i1 15.21137941 24.03941729 6.383341535 0.26553645 -1.913018181 0.006403523 0.026151548 Down 4.241249 5.805702 4.017718 1.250621 0.4165458 1.413771 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN28997_c0_g1_i1 168.9541481 68.61569432 269.2926018 3.924650249 1.972564092 4.68E-21 1.65E-19 Up 1.168081 1.502473 1.432317 4.029697 4.592028 4.377932 XP_011090652.1 "putative calcium-transporting ATPase 13, plasma membrane-type [Sesamum indicum]" Q9LIK7|ACA13_ARATH "Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA13 PE=3 SV=1" sind:105171288 K01537 E3.6.3.8 Ca2+-transporting ATPase -- -- KOG0204 Calcium transporting ATPase [P] METABOLISM Inorganic ion transport and metabolism P ENOG410XNNC "ATPase, Ca transporting, plasma membrane" Molecular Function: calcium-transporting ATPase activity (GO:0005388);|Molecular Function: calmodulin binding (GO:0005516);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of plasma membrane (GO:0005887);|Molecular Function: metal ion binding (GO:0046872); "PF00689.20,PF00122.19,PF00702.25,PF13246.5,PF00690.25" "Cation transporting ATPase, C-terminus|E1-E2 ATPase|haloacid dehalogenase-like hydrolase|Cation transport ATPase (P-type)|Cation transporter/ATPase, N-terminus" TRINITY_DN29001_c0_g4_i2 19.60472915 28.89882399 10.31063432 0.356783872 -1.486877693 0.034549102 0.10570111 Down 3.384115 1.155028 3.605976 1.171397 0.8232674 0.3450365 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29002_c0_g3_i2 12.41059482 18.57670945 6.244480184 0.336145656 -1.572841589 0.049178435 0.139801898 Down 3.680736 4.093527 2.049488 0.5338779 1.633159 0.5533813 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29005_c0_g1_i6 64.90582406 129.8116481 0 0 #NAME? 8.84E-41 7.26E-39 Down 6.747448 7.268258 6.052868 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29013_c0_g2_i1 495554.7765 133.4833869 990976.0695 7423.965576 12.85797431 0 0 Up 2.712813 2.369351 2.197148 15263.86 14835.46 13507.12 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF02247.15,PF02248.15" Large coat protein|Small coat protein TRINITY_DN29024_c0_g1_i1 27.36117849 37.68478437 17.03757261 0.452107473 -1.145262332 0.019125539 0.065364071 Down 2.863405 4.964981 5.390507 1.327317 2.036414 1.418512 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29024_c2_g2_i11 800.533192 1162.195772 438.8706115 0.377621931 -1.404985542 1.03E-40 8.45E-39 Down 57.78036 59.73502 61.15861 17.49961 19.05226 17.89895 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29024_c2_g3_i1 194.1775672 314.1631305 74.19200388 0.236157578 -2.082178267 1.83E-09 2.53E-08 Down 47.9235 74.41528 53.41277 12.82017 7.938458 12.78116 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29025_c1_g1_i1 41.11804285 58.05869806 24.17738763 0.416430069 -1.263853851 0.001629591 0.008040438 Down 7.00236 9.093696 9.803109 4.524518 1.473963 2.707927 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29027_c1_g2_i1 26.58281112 45.65128542 7.514336831 0.164602963 -2.602937792 2.12E-06 1.93E-05 Down 3.436222 2.811381 2.745781 0.139866 0.4134204 0.6766062 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29027_c1_g3_i1 34.04554393 67.3666174 0.724470471 0.010754146 -6.538963163 3.16E-19 9.86E-18 Down 5.279204 7.374077 4.763684 0 0.1755475 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29027_c1_g4_i2 56.31433742 112.6286748 0 0 #NAME? 8.96E-28 4.53E-26 Down 13.87453 10.64948 8.639944 2.22E-77 0 4.10E-60 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29029_c0_g1_i8 101.0066298 167.3294407 34.68381879 0.207278639 -2.270356645 1.48E-12 2.82E-11 Down 9.518561 9.337396 13.14824 2.076999 1.234865 2.050815 KZV26162.1 hypothetical protein F511_06329 [Dorcoceras hygrometricum] Q9FF52|RL123_ARATH 60S ribosomal protein L12-3 OS=Arabidopsis thaliana OX=3702 GN=RPL12C PE=2 SV=1 sot:102600463 K02870 "RP-L12e, RPL12" large subunit ribosomal protein L12e ko03010 Ribosome KOG0886 40S ribosomal protein S2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0080 This protein binds directly to 23S ribosomal RNA (By similarity) Biological Process: ribosomal large subunit assembly (GO:0000027);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); -- -- TRINITY_DN29029_c0_g2_i1 57.50430868 115.0086174 0 0 #NAME? 2.73E-36 1.91E-34 Down 7.735358 7.980721 6.990167 0 0 0 XP_011075206.1 putative F-box/LRR-repeat protein At5g02930 [Sesamum indicum] Q84W80|FBL42_ARATH F-box/LRR-repeat protein At3g03360 OS=Arabidopsis thaliana OX=3702 GN=At3g03360 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29036_c0_g2_i1 15.20952544 24.81501731 5.604033577 0.225832346 -2.146675956 0.002391819 0.011233507 Down 5.886414 3.225915 5.27941 1.753439 2.29E-34 0.8400627 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29051_c1_g1_i7 108.4749558 154.0963862 62.85352528 0.407884486 -1.29376746 2.36E-06 2.13E-05 Down 4.670197 5.590909 3.661088 1.831486 1.214195 1.52872 PRQ29719.1 putative RNA-directed DNA polymerase [Rosa chinensis] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF07727.13,PF00665.25" Reverse transcriptase (RNA-dependent DNA polymerase)|Integrase core domain TRINITY_DN29051_c1_g2_i1 27.06452095 42.27771151 11.85133039 0.280321001 -1.834848265 0.000349632 0.002055011 Down 5.500481 6.024856 7.398817 2.364753 0.9001384 0.9237763 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2905_c0_g1_i1 11.12766603 22.25533205 0 0 #NAME? 1.37E-07 1.48E-06 Down 4.462923 3.363874 4.316342 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29062_c0_g3_i4 12.05680367 23.36030981 0.753297531 0.032246898 -4.954695797 0.000161179 0.001022415 Down 0.8076316 1.947745 3.03715 0.09351033 2.19E-60 0.1095182 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29065_c0_g2_i1 12.82952448 22.97680969 2.682239265 0.116736801 -3.098668654 0.000172971 0.00109021 Down 1.644851 3.695565 2.903051 0.1140496 1.36E-40 0.6548708 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29065_c0_g3_i1 15.28023432 6.448825709 24.11164293 3.738919924 1.902621573 0.004172821 0.018162514 Up 0.3366024 2.54857 0.2580095 3.915136 2.853873 2.777239 PIN14621.1 hypothetical protein CDL12_12753 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XXGM NA -- -- -- TRINITY_DN29065_c0_g6_i1 21.18118976 42.00014429 0.362235236 0.008624619 -6.857323586 5.30E-08 6.08E-07 Down 7.166597 4.436326 2.845631 1.08E-63 0.1277562 5.27E-56 XP_011097190.1 3-ketoacyl-CoA synthase 6-like [Sesamum indicum] Q9XF43|KCS6_ARATH 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana OX=3702 GN=CUT1 PE=1 SV=1 sind:105176165 K15397 KCS 3-ketoacyl-CoA synthase ko00062 Fatty acid elongation -- -- -- -- -- I ENOG410Y5VH 3-ketoacyl-coa synthase Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Biological Process: response to cold (GO:0009409);|Biological Process: response to light stimulus (GO:0009416);|Biological Process: unidimensional cell growth (GO:0009826);|Biological Process: wax biosynthetic process (GO:0010025);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: 3-oxo-arachidoyl-CoA synthase activity (GO:0102336);|Molecular Function: 3-oxo-cerotoyl-CoA synthase activity (GO:0102337);|Molecular Function: 3-oxo-lignoceronyl-CoA synthase activity (GO:0102338);|Molecular Function: very-long-chain 3-ketoacyl-CoA synthase activity (GO:0102756); -- -- TRINITY_DN29068_c0_g2_i2 19.80539645 27.41059181 12.2002011 0.445090759 -1.167828549 0.048629439 0.138536221 Down 2.753416 3.233833 3.207484 1.104097 1.362914 0.8260201 XP_011089368.1 V-type proton ATPase subunit a1 isoform X2 [Sesamum indicum] Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1 OS=Arabidopsis thaliana OX=3702 GN=VHA-a1 PE=2 SV=1 sind:105170339 K02154 "ATPeV0A, ATP6N" V-type H+-transporting ATPase subunit a ko04145|ko00190 Phagosome|Oxidative phosphorylation KOG2189 "Vacuolar H+-ATPase V0 sector, subunit a" [C] METABOLISM Energy production and conversion C COG1269 ATPase 116 kDa subunit "Cellular Component: vacuolar proton-transporting V-type ATPase, V0 domain (GO:0000220);|Cellular Component: endosome (GO:0005768);|Cellular Component: vacuole (GO:0005773);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Biological Process: vacuolar acidification (GO:0007035);|Cellular Component: trans-Golgi network transport vesicle membrane (GO:0012510);|Biological Process: ATP hydrolysis coupled proton transport (GO:0015991);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: vacuolar proton-transporting V-type ATPase complex (GO:0016471);|Molecular Function: proton-transporting ATPase activity, rotational mechanism (GO:0046961);|Molecular Function: ATPase binding (GO:0051117);|Biological Process: proton-transporting V-type ATPase complex assembly (GO:0070070);" -- -- TRINITY_DN29072_c0_g2_i1 17.17953634 25.50792719 8.851145483 0.346995874 -1.527009588 0.016610517 0.058040275 Down 4.385713 2.383278 5.14282 1.61024 1.075974 0.5209422 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2907_c0_g1_i1 24.13481508 48.26963016 0 0 #NAME? 9.20E-06 7.49E-05 Down 4.173209 11.79892 4.1918 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29086_c3_g2_i1 473.8305644 947.6611287 0 0 #NAME? 2.42E-125 8.09E-123 Down 58.33927 48.0899 46.32131 1.07E-31 1.97E-25 9.97E-20 KZV22124.1 hypothetical protein F511_11652 [Dorcoceras hygrometricum] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN29101_c0_g2_i2 70.90266433 26.08730217 115.7180265 4.435798908 2.149193964 1.81E-11 3.13E-10 Up 0.687978 0.9271696 0.7927316 3.478619 2.628433 2.521211 XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=3 SV=2 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" PF00665.25 Integrase core domain TRINITY_DN29103_c0_g2_i1 343.0367059 465.9959283 220.0774834 0.472273404 -1.082305801 5.83E-08 6.66E-07 Down 13.09792 12.12446 11.36287 2.900796 5.808123 5.239359 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2910_c0_g1_i1 9.110266813 18.22053363 0 0 #NAME? 2.37E-06 2.14E-05 Down 1.281369 2.368876 2.254049 0 0 0 XP_012834682.1 PREDICTED: GDSL esterase/lipase At5g33370-like isoform X2 [Erythranthe guttata] Q9M8Y5|LTL1_ARATH GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana OX=3702 GN=LTL1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG3240 GDSL esterase lipase "Cellular Component: extracellular region (GO:0005576);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: response to lithium ion (GO:0010226);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);|Biological Process: hyperosmotic salinity response (GO:0042538);" -- -- TRINITY_DN29112_c1_g2_i6 179.9431162 286.2188783 73.66735418 0.257381185 -1.958021499 1.70E-21 6.14E-20 Down 13.97493 15.18438 13.25812 3.207089 2.509911 3.072141 KYP42973.1 "Putative ribonuclease H protein At1g65750 family, partial [Cajanus cajan]" -- -- tcc:TCM_016640 K01904 4CL 4-coumarate--CoA ligase ko00940|ko00130|ko00360 Phenylpropanoid biosynthesis|Ubiquinone and other terpenoid-quinone biosynthesis|Phenylalanine metabolism -- -- -- -- -- IQ COG0318 Amp-dependent synthetase and ligase -- -- -- TRINITY_DN29114_c0_g2_i1 7.087884312 14.17576862 0 0 #NAME? 4.86E-05 0.000345053 Down 2.677353 0.9840965 2.119713 4.64E-69 3.26E-80 1.33E-47 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2911_c0_g1_i1 19.91781008 3.635377036 36.20024312 9.95776855 3.315822483 6.95E-07 6.83E-06 Up 0.6303037 0.610831 0.9613734 3.851978 5.614354 7.084849 XP_021748199.1 proteinase inhibitor PSI-1.2-like [Chenopodium quinoa] Q43502|IP23_SOLLC Proteinase inhibitor type-2 CEVI57 OS=Solanum lycopersicum OX=4081 GN=CEVI57 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867); -- -- TRINITY_DN29122_c0_g2_i2 47.46107102 93.37898864 1.543153387 0.016525703 -5.919144588 3.93E-21 1.40E-19 Down 3.899541 5.711533 3.699368 0 1.14E-59 0.1598635 PIN22751.1 "1,3-beta-glucan synthase/callose synthase catalytic subunit [Handroanthus impetiginosus]" Q9SFU6|CALS9_ARATH Callose synthase 9 OS=Arabidopsis thaliana OX=3702 GN=CALS9 PE=2 SV=2 tcc:TCM_040336 K11000 CALS callose synthase -- -- KOG0916 "1,3-beta-glucan synthase/callose synthase catalytic subunit" [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis S ENOG410XQ8V synthase "Cellular Component: 1,3-beta-D-glucan synthase complex (GO:0000148);|Molecular Function: 1,3-beta-D-glucan synthase activity (GO:0003843);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: (1->3)-beta-D-glucan biosynthetic process (GO:0006075);|Biological Process: regulation of cell shape (GO:0008360);|Biological Process: pollen development (GO:0009555);|Biological Process: microsporogenesis (GO:0009556);|Biological Process: pollen germination (GO:0009846);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: developmental growth (GO:0048589);|Biological Process: callose deposition in cell wall (GO:0052543);|Biological Process: generative cell mitosis (GO:0055047);|Biological Process: regulation of pollen tube growth (GO:0080092);" -- -- TRINITY_DN29124_c1_g2_i1 98.93619768 155.9401645 41.93223083 0.268899491 -1.894861072 2.56E-07 2.68E-06 Down 16.13151 26.21716 19.59441 3.085325 3.915975 6.488149 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29124_c1_g4_i1 13.27301127 23.84550411 2.700518427 0.113250633 -3.142408985 0.000100864 0.000668687 Down 3.268349 2.241322 3.980408 1.02E-30 6.56E-10 0.8534304 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29127_c0_g2_i1 15.23662365 22.99301148 7.480235822 0.325326494 -1.620039775 0.015470301 0.054772901 Down 1.654035 3.225757 3.946824 0.000109544 1.131207 1.149343 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29128_c0_g1_i1 85.65566221 120.7212876 50.59003679 0.419064755 -1.254754905 1.26E-05 0.000100676 Down 7.215132 8.800291 5.695229 2.433961 2.285093 2.623179 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29129_c0_g2_i2 39.00934287 64.10554484 13.9131409 0.217034906 -2.204001003 0.027222637 0.087145075 Down 7.119527 15.35156 4.276393 0.3479636 1.525389 2.771819 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29136_c0_g4_i1 8.405393843 16.81078769 0 0 #NAME? 8.56E-06 7.02E-05 Down 3.341246 2.250058 1.561368 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29139_c1_g1_i4 202.4412017 276.9643631 127.9180403 0.461857399 -1.114480615 2.53E-09 3.44E-08 Down 5.145635 4.793382 4.742903 1.496334 1.981715 1.995638 XP_010553813.1 PREDICTED: DNA-binding protein SMUBP-2 [Tarenaya hassleriana] Q94CL6|NAR1_ARATH Protein NAR1 OS=Arabidopsis thaliana OX=3702 GN=NAR1 PE=1 SV=1 -- -- -- -- -- -- KOG1803 DNA helicase [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG1112 Helicase "Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);|Biological Process: response to oxygen levels (GO:0070482);" -- -- TRINITY_DN29139_c1_g2_i1 16.06138679 25.72888415 6.393889433 0.248510172 -2.008623188 0.003302193 0.014833889 Down 4.24169 4.050477 3.644797 1.176517 1.54E-60 1.184121 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29145_c0_g1_i1 6.176539703 12.35307941 0 0 #NAME? 0.000211216 0.001307118 Down 3.174724 1.384556 1.308418 0 0 0 PIN19966.1 hypothetical protein CDL12_07357 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YQG1 C2 domain-containing protein -- -- -- TRINITY_DN29150_c0_g1_i2 281.6099922 166.147255 397.0727294 2.389884379 1.256940823 5.72E-15 1.32E-13 Up 7.273327 7.544554 7.86218 14.96036 13.74009 15.11158 XP_020547405.1 "sufE-like protein 2, chloroplastic isoform X2 [Sesamum indicum]" Q9LIN2|GDL53_ARATH GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana OX=3702 GN=At3g26430 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y9BR GDSL esterase lipase Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: lipase activity (GO:0016298); PF02657.14 Fe-S metabolism associated domain TRINITY_DN29151_c0_g2_i2 41.84714015 25.28005162 58.41422869 2.310684707 1.208320418 0.002809388 0.012929793 Up 2.849831 1.875615 2.934056 4.176831 4.890207 5.255475 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29159_c0_g1_i17 288.997216 462.2101293 115.7843026 0.250501439 -1.997109203 1.38E-33 8.87E-32 Down 23.31746 22.4366 22.76629 4.829603 3.956851 5.061198 KZV14546.1 peroxidase 27-like [Dorcoceras hygrometricum] Q43735|PER27_ARATH Peroxidase 27 OS=Arabidopsis thaliana OX=3702 GN=PER27 PE=1 SV=1 sind:105178606 K00430 E1.11.1.7 peroxidase ko00940 Phenylpropanoid biosynthesis -- -- -- -- -- G ENOG410YDBA peroxidase Molecular Function: peroxidase activity (GO:0004601);|Cellular Component: extracellular region (GO:0005576);|Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: heme binding (GO:0020037);|Biological Process: hydrogen peroxide catabolic process (GO:0042744);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN29166_c1_g1_i1 19.06930536 32.65234269 5.486268021 0.168020655 -2.573289495 0.000174492 0.001099031 Down 4.980329 4.738975 8.893984 1.714104 0.8543191 1.14E-05 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29167_c0_g1_i6 824.2459643 474.1752242 1174.316704 2.476545893 1.308329356 1.74E-37 1.27E-35 Up 13.23644 11.80056 10.95573 24.50388 24.17751 23.18773 XP_011076612.1 putative receptor-like protein kinase At4g00960 [Sesamum indicum] Q9T0J1|CRK26_ARATH Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana OX=3702 GN=CRK26 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24,PF01657.16,PF08693.9" Protein tyrosine kinase|Protein kinase domain|Salt stress response/antifungal|Transmembrane alpha-helix domain TRINITY_DN29167_c0_g2_i1 224.5826707 139.2745434 309.8907979 2.225035461 1.153828329 2.28E-11 3.90E-10 Up 13.82282 10.49198 8.594986 18.04772 21.79484 19.18173 XP_011076612.1 putative receptor-like protein kinase At4g00960 [Sesamum indicum] Q9T0J1|CRK26_ARATH Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana OX=3702 GN=CRK26 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- PF01657.16 Salt stress response/antifungal TRINITY_DN29167_c0_g4_i1 39.22638636 19.129356 59.32341672 3.101171661 1.632813387 0.000190105 0.00118814 Up 1.344086 1.079508 3.211932 5.065557 4.906619 4.205798 XP_012848427.1 PREDICTED: uncharacterized protein LOC105968344 [Erythranthe guttata] Q9T0J1|CRK26_ARATH Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana OX=3702 GN=CRK26 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- PF01657.16 Salt stress response/antifungal TRINITY_DN29172_c0_g2_i1 18.38358532 34.20515424 2.562016393 0.074901472 -3.738862124 0.002324209 0.010951091 Down 3.570493 7.461815 2.070494 0.6121302 0.2046064 0 PJF17432.1 hypothetical protein PSACC_02744 [Paramicrosporidium saccamoebae] Q09170|CDS1_SCHPO Serine/threonine-protein kinase cds1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cds1 PE=1 SV=2 thj:104818191 K08818 CDC2L cell division cycle 2-like -- -- KOG0615 Serine/threonine protein kinase Chk2 and related proteins [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " T ENOG410YA63 doublecortin-like kinase Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: signal transduction (GO:0007165);|Biological Process: intra-S DNA damage checkpoint (GO:0031573);|Cellular Component: cell division site (GO:0032153);|Biological Process: mitotic DNA replication checkpoint (GO:0033314);|Biological Process: meiotic G2/MI DNA replication checkpoint (GO:0033315);|Biological Process: signal transduction in response to DNA damage (GO:0042770);|Biological Process: mitotic DNA damage checkpoint (GO:0044773);|Biological Process: negative regulation of protein export from nucleus (GO:0046826);|Biological Process: regulation of mitotic DNA replication initiation (GO:1903466); -- -- TRINITY_DN29172_c0_g3_i1 17.40197941 32.23139452 2.57256429 0.079815482 -3.647187573 1.13E-06 1.07E-05 Down 2.836437 1.829887 2.784304 0.4498195 0 2.73E-37 XP_011078508.1 berberine bridge enzyme-like 18 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29174_c0_g1_i1 62.58491863 103.7339096 21.43592763 0.206643398 -2.274784819 4.66E-11 7.72E-10 Down 7.390994 9.034808 8.524765 1.407569 0.5500891 2.179046 XP_011089872.1 uncharacterized protein LOC105170693 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111QDI Alpha beta hydrolase fold protein -- -- -- TRINITY_DN29174_c0_g3_i2 33.81203849 50.51177839 17.11229859 0.338778383 -1.561586275 0.001856334 0.009011077 Down 4.029059 4.203426 5.347778 0.8809704 0.1228082 2.713735 XP_011089872.1 uncharacterized protein LOC105170693 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111QDI Alpha beta hydrolase fold protein -- -- -- TRINITY_DN29174_c1_g1_i10 249.1486289 348.6737005 149.6235574 0.429122005 -1.220540213 2.23E-08 2.70E-07 Down 21.2045 18.05637 25.61053 7.027377 8.062781 7.399082 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29177_c0_g1_i2 120.9839284 215.971921 25.99593576 0.120367202 -3.054485764 3.40E-30 1.92E-28 Down 9.447064 8.73628 10.31238 0.8844612 0.9676946 0.9307535 XP_019191802.1 PREDICTED: BAG family molecular chaperone regulator 3-like [Ipomoea nil] Q0WUQ1|BAG1_ARATH BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana OX=3702 GN=BAG1 PE=1 SV=1 -- -- -- -- -- -- KOG4361 BCL2-associated athanogene-like proteins and related BAG family chaperone regulators [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms O ENOG4111WNH BCL-2-associated athanogene Cellular Component: nucleus (GO:0005634);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: cytosol (GO:0005829);|Molecular Function: chaperone binding (GO:0051087);|Biological Process: cytoplasm protein quality control by the ubiquitin-proteasome system (GO:0071629); -- -- TRINITY_DN29177_c0_g3_i1 39.11997357 54.69107886 23.54886829 0.430579699 -1.215647793 0.00343325 0.015340638 Down 7.812484 5.337112 6.525731 1.419995 2.282465 3.162137 -- -- Q40161|GP1_SOLLC Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum OX=4081 GN=GP1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: cell wall (GO:0005618);|Biological Process: fruit ripening (GO:0009835);|Cellular Component: apoplast (GO:0048046);|Biological Process: cell wall organization (GO:0071555); -- -- TRINITY_DN29180_c0_g2_i3 129.8086002 188.8180531 70.79914735 0.37495963 -1.415192818 1.24E-09 1.74E-08 Down 3.847938 3.968643 5.22823 1.394567 1.391302 1.161937 XP_011091360.1 histone-lysine N-methyltransferase family member SUVH9-like [Sesamum indicum] Q9T0G7|SUVH9_ARATH Histone-lysine N-methyltransferase family member SUVH9 OS=Arabidopsis thaliana OX=3702 GN=SUVH9 PE=1 SV=1 sind:105171817 K11420 EHMT euchromatic histone-lysine N-methyltransferase ko00310 Lysine degradation KOG1082 "Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing" [BK] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics |Transcription S COG2940 Histone-lysine N-methyltransferase "Cellular Component: chromosome, centromeric region (GO:0000775);|Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA mediated transformation (GO:0009294);|Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);|Biological Process: RNA-directed DNA methylation (GO:0080188);" "PF02182.16,PF05033.15,PF00856.27" SAD/SRA domain|Pre-SET motif|SET domain TRINITY_DN29181_c0_g2_i3 175.7107368 257.0047247 94.41674903 0.367373593 -1.444680168 5.83E-13 1.15E-11 Down 19.07301 23.78788 22.05544 4.553526 6.473279 8.273705 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29181_c0_g3_i1 38.84226634 66.38458105 11.29995163 0.170219522 -2.554531592 0.00172022 0.008435339 Down 3.771268 6.695514 9.89296 3.18E-05 2.465937 0.2433128 XP_020549569.1 uncharacterized protein LOC105161451 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y9P5 acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain-containing protein -- -- -- TRINITY_DN29185_c0_g1_i13 146.5556965 198.9103294 94.2010637 0.47358558 -1.078302941 9.84E-07 9.45E-06 Down 6.462385 5.16314 4.893332 1.754905 2.539679 2.019034 XP_011082764.1 uncharacterized protein LOC105165447 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29189_c0_g2_i1 11.83630803 20.3650334 3.307582659 0.162414792 -2.622245064 0.002077816 0.009951904 Down 3.552521 4.20898 2.770392 1.314965 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29194_c1_g1_i1 25.80395058 41.18513454 10.42276661 0.253071083 -1.982385425 0.001095542 0.005661423 Down 9.31062 5.213245 4.680951 0.5816445 1.744403 1.635003 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29195_c1_g2_i4 6.337577249 11.94013613 0.735018369 0.061558626 -4.02189517 0.003019584 0.013738397 Down 1.259602 1.95904 1.446505 0.1961941 2.14E-56 0.003052185 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29195_c2_g1_i8 61.98861182 92.27812723 31.69909641 0.343516902 -1.541547009 3.26E-06 2.88E-05 Down 2.778506 2.580686 3.268353 0.6760578 0.7252567 0.9716946 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29196_c0_g2_i1 27.43963673 39.73126763 15.14800584 0.381261579 -1.391146941 0.007958021 0.031461281 Down 5.077646 5.256248 2.530505 1.468873 1.4791 0.934913 EOY03353.1 H(+)-ATPase 4 isoform 1 [Theobroma cacao] Q08435|PMA1_NICPL Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia OX=4092 GN=PMA1 PE=2 SV=1 tcc:TCM_018330 K01535 "PMA1, PMA2" H+-transporting ATPase ko00190 Oxidative phosphorylation KOG0205 Plasma membrane H+-transporting ATPase [P] METABOLISM Inorganic ion transport and metabolism P COG0474 P-type atpase "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: proton-exporting ATPase activity, phosphorylative mechanism (GO:0008553);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: proton export across plasma membrane (GO:0120029);" -- -- TRINITY_DN29202_c0_g1_i4 256.225742 392.4402222 120.0112618 0.305807751 -1.70930312 3.08E-23 1.22E-21 Down 7.43058 8.231175 7.530327 2.149117 1.697939 1.875524 PIN10351.1 Cation transport ATPase [Handroanthus impetiginosus] Q9SZW4|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2 OS=Arabidopsis thaliana OX=3702 GN=HMA2 PE=2 SV=1 sind:105161649 K01534 zntA Cd2+/Zn2+-exporting ATPase -- -- KOG0207 Cation transport ATPase [P] METABOLISM Inorganic ion transport and metabolism P COG2217 p-type ATPase Molecular Function: zinc ion transmembrane transporter activity (GO:0005385);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: cadmium-exporting ATPase activity (GO:0008551);|Molecular Function: cadmium ion transmembrane transporter activity (GO:0015086);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: zinc-exporting ATPase activity (GO:0016463);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: zinc ion homeostasis (GO:0055069); "PF00122.19,PF00702.25" E1-E2 ATPase|haloacid dehalogenase-like hydrolase TRINITY_DN29205_c1_g3_i1 63.97328372 124.6706285 3.275938966 0.02627675 -5.250069328 1.69E-30 9.68E-29 Down 8.345301 7.543644 8.412878 0.1778163 0.3584175 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29216_c1_g1_i1 11.42159508 19.90311669 2.940073475 0.14771925 -2.75907025 0.00902551 0.034995725 Down 4.699059 1.623787 2.343797 0.9794045 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29218_c0_g1_i10 1342.321306 860.5288397 1824.113772 2.119759023 1.083900267 3.51E-36 2.46E-34 Up 24.8935 24.44025 23.31045 40.63062 43.80537 39.73243 EYU40664.1 hypothetical protein MIMGU_mgv1a004824mg [Erythranthe guttata] P07519|CBP1_HORVU Serine carboxypeptidase 1 OS=Hordeum vulgare OX=4513 GN=CBP1 PE=1 SV=4 sind:105170518 K16296 SCPL-I serine carboxypeptidase-like clade I -- -- KOG1282 Serine carboxypeptidases (lysosomal cathepsin A) [OE] CELLULAR PROCESSES AND SIGNALING|METABOLISM "Posttranslational modification, protein turnover, chaperones |Amino acid transport and metabolism " E COG2939 carboxy-peptidase Molecular Function: serine-type carboxypeptidase activity (GO:0004185);|Cellular Component: extracellular region (GO:0005576); PF00450.21 Serine carboxypeptidase TRINITY_DN29221_c0_g3_i1 27.49698337 46.51842103 8.475545717 0.182197623 -2.456423961 4.74E-06 4.06E-05 Down 7.922386 4.54063 6.371828 0.6123593 1.494714 0.6325311 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29223_c0_g2_i1 64.18030462 93.73971852 34.62089072 0.369330005 -1.43701762 9.92E-06 8.03E-05 Down 12.54258 10.9783 13.70444 3.980373 3.119993 4.019786 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29226_c1_g1_i5 15.24451911 28.65430892 1.834729289 0.064029787 -3.965112985 1.68E-06 1.56E-05 Down 2.517422 2.790778 3.19861 1.32E-74 0.3501109 0.09251262 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29227_c1_g1_i2 6.896632415 13.06879436 0.724470471 0.055435142 -4.173055356 0.001778655 0.008685293 Down 2.194996 1.907098 0.8307561 0 0.2606155 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29227_c1_g4_i1 27.82841604 43.07611659 12.5807155 0.292057792 -1.775674219 0.000454121 0.002591639 Down 3.544046 2.823363 3.835102 0.7276956 1.00437 0.6536458 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29227_c1_g7_i2 89.06350642 120.7434451 57.38356777 0.475252033 -1.073235296 0.005755254 0.023897571 Down 7.923378 7.412798 12.89118 3.226918 4.460922 3.128739 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29227_c1_g8_i1 6.730009424 13.46001885 0 0 #NAME? 0.000169034 0.001067465 Down 0.9778478 3.104335 1.495126 2.55E-70 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29227_c1_g9_i1 12.2514452 22.18816032 2.31473008 0.104322758 -3.260874178 0.00016967 0.001071333 Down 6.2869 3.457058 3.606852 0 0 1.120238 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29231_c1_g2_i1 168.638362 332.4783681 4.798355875 0.014432084 -6.114576508 1.92E-51 2.17E-49 Down 14.79287 11.78473 10.81126 0.2584687 0.08565551 0.08401066 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29234_c1_g1_i2 319.6027141 158.2545986 480.9508295 3.039095443 1.603641984 3.37E-25 1.48E-23 Up 2.235103 1.982861 2.578981 5.811567 5.624155 5.227682 XP_011088856.1 pleiotropic drug resistance protein 2 [Sesamum indicum] Q2PCF1|PDR2_NICPL Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia OX=4092 GN=PDR2 PE=2 SV=1 -- -- -- -- -- -- KOG0065 "Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG0842 (ABC) transporter Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887); "PF01061.23,PF00005.26,PF08370.10,PF14510.5,PF13304.5,PF13191.5,PF13555.5,PF03193.15,PF13238.5,PF00004.28,PF02463.18,PF13671.5,PF13401.5" "ABC-2 type transporter|ABC transporter|Plant PDR ABC transporter associated|ABC-transporter extracellular N-terminal|AAA domain, putative AbiEii toxin, Type IV TA system|AAA ATPase domain|P-loop containing region of AAA domain|RsgA GTPase|AAA domain|ATPase family associated with various cellular activities (AAA)|RecF/RecN/SMC N terminal domain|AAA domain|AAA domain" TRINITY_DN29237_c0_g1_i3 66.87084657 129.954469 3.787224134 0.0291427 -5.100721633 2.01E-31 1.19E-29 Down 13.66757 13.78675 15.80294 2.67E-26 0.2726219 0.7309499 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29237_c0_g2_i1 67.56692369 132.9393402 2.194507208 0.016507583 -5.920727279 1.74E-13 3.58E-12 Down 20.95696 17.46975 9.956071 0.4763898 0.2440924 0.00026681 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29239_c0_g2_i2 26.38006673 36.42066157 16.33947189 0.448631935 -1.156395774 0.024039527 0.078658276 Down 4.038767 4.138833 3.735283 1.682876 1.247067 1.32032 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29242_c0_g6_i1 26.15940057 39.59676698 12.72203416 0.32128972 -1.638053275 0.001527918 0.007600745 Down 1.998944 2.594432 2.331797 0.4971765 0.4727618 0.8197233 PIN23980.1 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Handroanthus impetiginosus] Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana OX=3702 GN=At2g25520 PE=1 SV=1 -- -- -- -- -- -- KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [GE] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Amino acid transport and metabolism S ENOG410XP1S solute carrier family 35 member Cellular Component: endosome (GO:0005768);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Biological Process: carbohydrate transport (GO:0008643);|Cellular Component: integral component of membrane (GO:0016021); "PF03151.15,PF08449.10" Triose-phosphate Transporter family|UAA transporter family TRINITY_DN29248_c2_g2_i1 32.60323727 55.55774195 9.648732604 0.173670352 -2.525576608 2.63E-07 2.74E-06 Down 3.11556 4.587186 4.196546 0.4731406 0.6230675 0.510302 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29252_c0_g3_i5 189.1836575 102.9505853 275.4167298 2.675232288 1.419664165 2.68E-13 5.42E-12 Up 8.032634 9.928281 9.629637 20.49562 18.83372 20.27724 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29252_c0_g4_i1 8.202428636 0 16.40485727 Inf Inf 2.95E-06 2.62E-05 Up 3.51E-46 0 1.56E-36 2.849847 1.709871 2.862778 XP_011087837.1 "15-cis-phytoene desaturase, chloroplastic/chromoplastic [Sesamum indicum]" -- -- -- -- -- -- -- -- -- -- -- -- -- Q COG1233 phytoene -- -- -- TRINITY_DN29252_c0_g6_i1 80.71421172 51.46085108 109.9675724 2.136917094 1.095530937 0.000106747 0.000703171 Up 7.333659 9.42329 6.291872 10.96518 14.97902 13.80103 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29255_c1_g1_i6 253.6032994 403.4292006 103.7773983 0.257238192 -1.958823239 1.07E-28 5.71E-27 Down 12.46114 12.28867 10.95399 2.665632 2.5997 2.164544 CAN74951.1 "hypothetical protein VITISV_030567, partial [Vitis vinifera]" Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF14223.5,PF13976.5,PF00665.25,PF03732.16" gag-polypeptide of LTR copia-type|GAG-pre-integrase domain|Integrase core domain|Retrotransposon gag protein TRINITY_DN29260_c0_g1_i1 61.37708416 86.10082554 36.65334278 0.425702571 -1.232082292 0.000175078 0.001102417 Down 8.079515 6.773192 9.914412 3.684077 2.673073 2.171881 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29273_c1_g3_i2 65.35442435 34.01619799 96.69265072 2.84254727 1.507184341 0.00010438 0.000689684 Up 0.9707094 0.6561048 1.573215 3.039132 1.867559 2.427922 XP_012832913.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN29273_c1_g5_i1 10.78385721 3.687905779 17.87980864 4.848228157 2.277457594 0.007871449 0.031186932 Up 0.1475171 0.428518 0.4519738 1.136866 1.44824 1.627781 XP_022862745.1 receptor kinase-like protein Xa21 [Olea europaea var. sylvestris] Q9LVP0|Y5639_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Arabidopsis thaliana OX=3702 GN=At5g63930 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN29273_c1_g7_i1 35.10013818 13.51146131 56.68881505 4.195609471 2.068880397 0.000446477 0.002553477 Up 5.393962 0.4067284 1.944025 5.409259 9.858586 11.36094 KZV14417.1 putative LRR receptor-like serine/threonine-protein kinase [Dorcoceras hygrometricum] C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana OX=3702 GN=EFR PE=1 SV=1 tcc:TCM_031798 K13420 FLS2 LRR receptor-like serine/threonine-protein kinase FLS2 ko04626 Plant-pathogen interaction -- -- -- -- -- S ENOG410YQSI Leucine rich repeat N-terminal domain -- PF08263.11 Leucine rich repeat N-terminal domain TRINITY_DN29273_c1_g8_i1 14.07901201 21.05794329 7.100080741 0.337168765 -1.5684572 0.027675476 0.088326857 Down 3.18373 3.891515 3.674097 1.435498 0.359033 1.135617 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF13855.5,PF12799.6" Leucine rich repeat|Leucine Rich repeats (2 copies) TRINITY_DN2927_c0_g1_i1 15.29010815 30.5802163 0 0 #NAME? 1.12E-07 1.23E-06 Down 3.590135 4.954914 1.758039 0 0 0 KYP51634.1 hypothetical protein KK1_026518 [Cajanus cajan] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29280_c0_g4_i1 16.22710111 26.57405528 5.88014695 0.221273979 -2.176094289 0.02799715 0.089152901 Down 6.2332 2.657354 2.927822 2.032784 0 0 PIN18932.1 Annexin [Handroanthus impetiginosus] Q9XEE2|ANXD2_ARATH Annexin D2 OS=Arabidopsis thaliana OX=3702 GN=ANN2 PE=1 SV=1 -- -- -- -- -- -- KOG0819 Annexin [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " S ENOG410XPUN annexin A7 Molecular Function: peroxidase activity (GO:0004601);|Molecular Function: copper ion binding (GO:0005507);|Molecular Function: calcium ion binding (GO:0005509);|Molecular Function: ATP binding (GO:0005524);|Molecular Function: calcium-dependent phospholipid binding (GO:0005544);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: response to heat (GO:0009408);|Biological Process: response to cold (GO:0009409);|Biological Process: response to water deprivation (GO:0009414);|Cellular Component: thylakoid (GO:0009579);|Biological Process: response to salt stress (GO:0009651);|Biological Process: polysaccharide transport (GO:0015774);|Cellular Component: membrane (GO:0016020);|Molecular Function: protein homodimerization activity (GO:0042803);|Cellular Component: apoplast (GO:0048046); -- -- TRINITY_DN29291_c1_g2_i1 6.9637729 12.0587155 1.868830298 0.154977559 -2.689868765 0.017931737 0.061871034 Down 0.5809814 1.169823 0.6161097 0.1254134 0.06765856 0.1456241 XP_011090196.1 protein argonaute 4-like [Sesamum indicum] Q9ZVD5|AGO4_ARATH Protein argonaute 4 OS=Arabidopsis thaliana OX=3702 GN=AGO4 PE=1 SV=2 sind:105170945 K11593 "ELF2C, AGO" eukaryotic translation initiation factor 2C -- -- KOG1041 Translation initiation factor 2C (eIF-2C) and related proteins [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J ENOG410XP07 eukaryotic translation initiation factor 2c "Molecular Function: chromatin binding (GO:0003682);|Molecular Function: endoribonuclease activity (GO:0004521);|Cellular Component: nucleoplasm (GO:0005654);|Cellular Component: nuclear euchromatin (GO:0005719);|Cellular Component: nucleolus (GO:0005730);|Biological Process: DNA methylation (GO:0006306);|Biological Process: chromatin silencing (GO:0006342);|Biological Process: regulation of translation (GO:0006417);|Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);|Cellular Component: Cajal body (GO:0015030);|Biological Process: gene silencing (GO:0016458);|Biological Process: modulation by virus of host morphology or physiology (GO:0019048);|Biological Process: production of siRNA involved in RNA interference (GO:0030422);|Biological Process: chromatin silencing by small RNA (GO:0031048);|Molecular Function: siRNA binding (GO:0035197);|Molecular Function: miRNA binding (GO:0035198);|Biological Process: histone H3-K9 methylation (GO:0051567);|Biological Process: defense response to virus (GO:0051607);|Biological Process: production of siRNA involved in chromatin silencing by small RNA (GO:0070919);|Biological Process: RNA-directed DNA methylation (GO:0080188);" PF16486.4 N-terminal domain of argonaute TRINITY_DN29293_c0_g1_i4 26.33439949 37.4395859 15.22921307 0.406767669 -1.297723082 0.012714868 0.046514427 Down 2.136969 3.411819 1.94325 1.064584 0.6323896 0.7388044 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29293_c1_g5_i1 12.67054997 19.29398321 6.047116727 0.313419819 -1.673831683 0.031301836 0.097601611 Down 2.946398 3.157689 1.40887 0.3832103 0.3879056 1.188382 XP_009390474.1 PREDICTED: SUMO-conjugating enzyme SCE1-like [Musa acuminata subsp. malaccensis] Q42551|SCE1_ARATH SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana OX=3702 GN=SCE1 PE=1 SV=1 mus:103976866 K10577 "UBE2I, UBC9" ubiquitin-conjugating enzyme E2 I ko04120|ko03013 Ubiquitin mediated proteolysis|RNA transport KOG0424 Ubiquitin-protein ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG5078 ubiquitin-conjugating enzyme Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: protein sumoylation (GO:0016925);|Molecular Function: SUMO transferase activity (GO:0019789);|Molecular Function: kinase binding (GO:0019900);|Molecular Function: SUMO conjugating enzyme activity (GO:0061656); -- -- TRINITY_DN29293_c1_g7_i1 16.39483948 23.64043361 9.149245347 0.387016816 -1.369531841 0.035884063 0.108948249 Down 4.634455 5.846937 3.673885 1.116832 0 3.441362 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29296_c0_g1_i3 760.6464633 1109.217088 412.0758386 0.371501524 -1.428559966 3.60E-40 2.90E-38 Down 59.07307 62.92207 60.36446 18.12439 19.64279 16.91564 PHU10628.1 "Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic [Capsicum chinense]" P55242|GLGL2_SOLTU "Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 GN=AGPS2 PE=2 SV=1" sind:105169655 K00975 glgC glucose-1-phosphate adenylyltransferase ko00520|ko00500 Amino sugar and nucleotide sugar metabolism|Starch and sucrose metabolism KOG1322 GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis G COG0448 "Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans (By similarity)" Molecular Function: ATP binding (GO:0005524);|Biological Process: glycogen biosynthetic process (GO:0005978);|Molecular Function: glucose-1-phosphate adenylyltransferase activity (GO:0008878);|Cellular Component: amyloplast (GO:0009501);|Cellular Component: chloroplast (GO:0009507);|Biological Process: starch biosynthetic process (GO:0019252); -- -- TRINITY_DN29296_c0_g2_i6 897.2239525 1343.512462 450.9354426 0.335639196 -1.575016891 2.17E-54 2.70E-52 Down 69.16216 66.21766 69.07453 18.8287 15.32968 21.27189 PIN12192.1 GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Handroanthus impetiginosus] P55231|GLGL3_ARATH "Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APL3 PE=2 SV=2" sind:105169655 K00975 glgC glucose-1-phosphate adenylyltransferase ko00520|ko00500 Amino sugar and nucleotide sugar metabolism|Starch and sucrose metabolism KOG1322 GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis G COG0448 "Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans (By similarity)" Molecular Function: ATP binding (GO:0005524);|Biological Process: glycogen biosynthetic process (GO:0005978);|Molecular Function: glucose-1-phosphate adenylyltransferase activity (GO:0008878);|Cellular Component: chloroplast (GO:0009507);|Biological Process: starch biosynthetic process (GO:0019252); -- -- TRINITY_DN29297_c0_g2_i1 10.95632922 16.71305169 5.199606751 0.311110553 -1.684500763 0.043643721 0.127231355 Down 2.214153 1.246369 1.519578 0.2031431 0.6067303 0.4254816 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29298_c0_g1_i3 197.72374 283.8642984 111.5831817 0.393086353 -1.347081819 1.43E-12 2.73E-11 Down 8.420173 7.878531 8.097342 3.228686 1.920809 2.573788 XP_011086011.1 "protein CHUP1, chloroplastic isoform X1 [Sesamum indicum]" Q9LI74|CHUP1_ARATH "Protein CHUP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHUP1 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDCU NA Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast outer membrane (GO:0009707);|Biological Process: chloroplast relocation (GO:0009902); -- -- TRINITY_DN29299_c1_g3_i1 358.9555856 480.8196104 237.0915608 0.493098775 -1.020051426 1.41E-12 2.70E-11 Down 17.57494 18.78934 17.51901 6.771918 7.291296 7.356358 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29301_c0_g1_i6 105.7433944 203.3551992 8.131589644 0.039987124 -4.644320654 8.65E-44 7.84E-42 Down 28.58675 26.73749 25.14355 0.4562233 1.365133 0.7496499 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29301_c0_g6_i2 9.649671508 19.29934302 0 0 #NAME? 1.06E-06 1.01E-05 Down 2.46275 2.077116 3.287754 2.11E-57 5.01E-51 6.55E-41 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29303_c0_g1_i1 233.4613731 140.9398921 325.9828542 2.312921127 1.20971607 3.08E-12 5.70E-11 Up 3.105524 2.963239 2.847361 5.526599 5.39395 5.717628 XP_011091175.1 ethylene receptor 2 [Sesamum indicum] Q0WPQ2|ETR2_ARATH Ethylene receptor 2 OS=Arabidopsis thaliana OX=3702 GN=ETR2 PE=1 SV=2 sind:105171681 K14509 "ETR, ERS" ethylene receptor ko04075 Plant hormone signal transduction KOG0519 Sensory transduction histidine kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0642 Histidine kinase Molecular Function: phosphorelay sensor kinase activity (GO:0000155);|Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: negative regulation of ethylene-activated signaling pathway (GO:0010105);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ethylene receptor activity (GO:0038199);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: ethylene binding (GO:0051740); "PF00072.23,PF01590.25,PF00512.24" Response regulator receiver domain|GAF domain|His Kinase A (phospho-acceptor) domain TRINITY_DN29305_c0_g1_i10 768.9660418 1093.812561 444.1195231 0.406028911 -1.300345637 1.63E-34 1.08E-32 Down 51.99404 54.9589 55.12904 18.84612 15.69672 18.54802 XP_022865255.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Olea europaea var. sylvestris] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); PF14372.5 Domain of unknown function (DUF4413) TRINITY_DN29305_c0_g2_i1 31.50884004 63.01768007 0 0 #NAME? 1.76E-07 1.87E-06 Down 5.067256 3.321998 9.870547 1.06E-32 1.24E-32 2.01E-27 XP_007224101.2 zinc finger BED domain-containing protein RICESLEEPER 2 [Prunus persica] P08770|TRA1_MAIZE Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: transposition (GO:0032196);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN29315_c1_g1_i1 634.2392987 335.3659956 933.1126017 2.782370944 1.476314772 8.02E-38 5.96E-36 Up 8.592696 8.519638 9.016558 20.62476 19.54409 18.54321 XP_011098479.1 "L-aspartate oxidase, chloroplastic [Sesamum indicum]" Q94AY1|NADB_ARATH "L-aspartate oxidase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AO PE=1 SV=1" sind:105177134 K00278 nadB L-aspartate oxidase ko00250|ko00760 "Alanine, aspartate and glutamate metabolism|Nicotinate and nicotinamide metabolism" KOG2403 "Succinate dehydrogenase, flavoprotein subunit" [C] METABOLISM Energy production and conversion H COG0029 L-aspartate oxidase Molecular Function: L-aspartate oxidase activity (GO:0008734);|Biological Process: NAD biosynthetic process (GO:0009435);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: L-aspartate:fumarate oxidoreductase activity (GO:0044318); "PF00890.23,PF02910.19,PF01266.23" FAD binding domain|Fumarate reductase flavoprotein C-term|FAD dependent oxidoreductase TRINITY_DN29326_c0_g2_i2 13.85043563 23.2622933 4.438577955 0.190805691 -2.38982389 0.001850424 0.008988368 Down 2.30134 2.662748 1.853372 0.3701959 0.4278131 0.2482526 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29326_c1_g1_i8 339.1479089 481.7110572 196.5847606 0.408096841 -1.293016553 2.17E-18 6.39E-17 Down 8.865656 7.62477 9.059262 2.645781 2.617151 3.160104 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29338_c0_g1_i1 12.32906818 19.80494299 4.853193362 0.2450496 -2.028854302 0.00888226 0.034511037 Down 2.904162 2.11598 3.889388 0.7239328 0.354587 0.6957982 EYU36200.1 hypothetical protein MIMGU_mgv1a001379mg [Erythranthe guttata] Q6L4L4|SIZ1_ORYSJ E3 SUMO-protein ligase SIZ1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIZ1 PE=1 SV=1 sly:101253594 K10706 "SETX, ALS4" senataxin -- -- KOG2169 Zn-finger transcription factor [K] INFORMATION STORAGE AND PROCESSING Transcription S ENOG410XQ2E Protein inhibitor of activated STAT Cellular Component: nucleus (GO:0005634);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: protein sumoylation (GO:0016925);|Biological Process: cellular response to extracellular stimulus (GO:0031668);|Molecular Function: SUMO ligase activity (GO:0061665); -- -- TRINITY_DN29342_c0_g1_i2 384.3149926 538.6771614 229.9528238 0.426884302 -1.228082986 3.71E-18 1.08E-16 Down 9.885405 11.34062 9.586919 3.54138 3.52285 3.54872 XP_012851221.1 PREDICTED: alpha-aminoadipic semialdehyde synthase [Erythranthe guttata] Q9SMZ4|AASS_ARATH Alpha-aminoadipic semialdehyde synthase OS=Arabidopsis thaliana OX=3702 GN=LKR/SDH PE=1 SV=1 sind:105173734 K14157 AASS alpha-aminoadipic semialdehyde synthase ko00310 Lysine degradation KOG0172 Lysine-ketoglutarate reductase/saccharopine dehydrogenase [E] METABOLISM Amino acid transport and metabolism E COG1748 saccharopine dehydrogenase "Molecular Function: saccharopine dehydrogenase activity (GO:0004753);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: lysine biosynthetic process via aminoadipic acid (GO:0019878);|Biological Process: L-lysine catabolic process to acetyl-CoA via saccharopine (GO:0033512);|Molecular Function: saccharopine dehydrogenase (NADP+, L-lysine-forming) activity (GO:0047130);|Molecular Function: saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity (GO:0047131);" "PF16653.4,PF05222.14,PF04455.11,PF03435.17" "Saccharopine dehydrogenase C-terminal domain|Alanine dehydrogenase/PNT, N-terminal domain|LOR/SDH bifunctional enzyme conserved region|Saccharopine dehydrogenase NADP binding domain" TRINITY_DN29343_c0_g2_i2 21.52357256 33.26764175 9.779503373 0.293964431 -1.766286492 0.001722744 0.008444069 Down 3.511028 4.666604 6.316859 0.7837387 0.7822876 1.946469 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2934_c0_g1_i1 13.64162317 4.505595433 22.77765091 5.05541415 2.337829286 0.002167061 0.010318831 Up 0.1838088 0.2939585 0.4129657 1.359357 0.9195037 1.590954 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29364_c0_g2_i1 5.030741881 8.969504106 1.091979655 0.121743593 -3.038082248 0.034236817 0.104915402 Down 1.132717 1.416835 0.7242854 0.105274 0.2129519 7.32E-41 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29365_c0_g2_i1 9.955512461 16.54614746 3.364877462 0.203363198 -2.297869472 0.009879717 0.037686554 Down 1.107105 1.76875 1.807397 0.1634149 0.2412924 0.3565688 PIN20748.1 Transketolase [Handroanthus impetiginosus] Q6YU51|DXS2_ORYSJ "Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190000 PE=2 SV=1" sind:105178233 K01662 dxs 1-deoxy-D-xylulose-5-phosphate synthase ko00730|ko00900 Thiamine metabolism|Terpenoid backbone biosynthesis KOG0523 Transketolase [G] METABOLISM Carbohydrate transport and metabolism H COG1154 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (By similarity) Molecular Function: 1-deoxy-D-xylulose-5-phosphate synthase activity (GO:0008661);|Biological Process: thiamine biosynthetic process (GO:0009228);|Cellular Component: chloroplast (GO:0009507);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: 1-deoxy-D-xylulose 5-phosphate biosynthetic process (GO:0052865); PF13292.5 1-deoxy-D-xylulose-5-phosphate synthase TRINITY_DN29366_c0_g2_i1 6.254029123 11.40553069 1.102527553 0.096666046 -3.370846961 0.009727599 0.037225049 Down 0.9684765 1.424859 3.436314 0.5142727 0 3.02E-38 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29367_c1_g2_i1 30.6324437 7.696781533 53.56810586 6.959805944 2.799047081 0.02959081 0.093182316 Up 0.5791134 0.4787712 1.141744 7.257771 1.335691 3.607053 XP_011089065.1 putative G3BP-like protein [Sesamum indicum] O94260|G3BP_SCHPO Putative G3BP-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nxt3 PE=1 SV=1 -- -- -- -- -- -- KOG0116 "RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains" [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410YV57 GTPase activating protein (SH3 domain) binding protein Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA binding (GO:0003729);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytoplasmic stress granule (GO:0010494);|Biological Process: protein deubiquitination (GO:0016579);|Biological Process: ribophagy (GO:0034517);|Biological Process: mRNA transport (GO:0051028);|Biological Process: regulation of ER to Golgi vesicle-mediated transport (GO:0060628);|Molecular Function: polysome binding (GO:1905538);|Cellular Component: Ubp3-Bre5 deubiquitination complex (GO:1990861);|Cellular Component: ribonucleoprotein complex (GO:1990904); PF02136.19 Nuclear transport factor 2 (NTF2) domain TRINITY_DN29368_c0_g3_i1 38.99749584 59.30668871 18.68830298 0.315112905 -1.666059255 0.010061933 0.03823383 Down 10.67719 4.495168 13.23984 2.820556 1.331402 2.974738 AIU99490.1 ABC Acyl Transporter [Salvia miltiorrhiza] Q94FB9|AB1D_ARATH ABC transporter D family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCD1 PE=1 SV=1 -- -- -- -- -- -- KOG0060 "Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis)" [IR] METABOLISM|POORLY CHARACTERIZED Lipid transport and metabolism |General function prediction only S COG4178 (ABC) transporter "Molecular Function: long-chain fatty acid transporter activity (GO:0005324);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Cellular Component: glyoxysomal membrane (GO:0046861);" -- -- TRINITY_DN29369_c0_g4_i1 21.44207507 34.63233762 8.251812516 0.238269002 -2.069336822 0.000477001 0.002709611 Down 6.156861 5.98478 5.009597 0 1.470813 1.920932 KFK36824.1 hypothetical protein AALP_AA4G176300 [Arabis alpina] O80946|AB1G_ARATH ABC transporter G family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCG1 PE=2 SV=1 -- -- -- -- -- -- KOG0061 "Transporter, ABC superfamily (Breast cancer resistance protein)" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1131 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to nematode (GO:0009624);|Biological Process: pollen wall assembly (GO:0010208);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: transmembrane transport (GO:0055085);" -- -- TRINITY_DN29370_c0_g3_i1 22.54581194 37.02823625 8.063387626 0.217763211 -2.199167849 0.000168736 0.001065881 Down 8.73022 6.230617 8.08414 9.44E-25 3.27628 0.8282528 PIN02415.1 Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit) [Handroanthus impetiginosus] Q5WA72|PDI15_ORYSJ Protein disulfide isomerase-like 1-5 OS=Oryza sativa subsp. japonica OX=39947 GN=PDIL1-5 PE=2 SV=1 sind:105157641 K09580 "PDIA1, P4HB" protein disulfide-isomerase A1 ko04141 Protein processing in endoplasmic reticulum KOG0190 Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0526 Thioredoxin Molecular Function: protein disulfide isomerase activity (GO:0003756);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum lumen (GO:0005788);|Biological Process: protein folding (GO:0006457);|Biological Process: response to endoplasmic reticulum stress (GO:0034976);|Biological Process: cell redox homeostasis (GO:0045454); -- -- TRINITY_DN29378_c1_g3_i1 3.326387556 6.652775113 0 0 #NAME? 0.011521744 0.042827261 Down 2.110279 0.6676141 1.645804 3.29E-82 5.97E-27 4.91E-26 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29381_c0_g1_i16 376.0883241 715.4464815 36.73016676 0.051338804 -4.2838065 1.38E-128 4.87E-126 Down 13.77134 12.47159 12.64183 0.4437224 0.3858132 0.786803 KYP59490.1 Protein regulator of cytokinesis 1 [Cajanus cajan] Q9FLP0|MA651_ARATH 65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=MAP65-1 PE=1 SV=1 cam:101515075 K16732 PRC1 protein regulator of cytokinesis 1 -- -- KOG4302 Microtubule-associated protein essential for anaphase spindle elongation [DZ] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning |Cytoskeleton " S ENOG410YZBK protein regulator of cytokinesis Cellular Component: nucleus (GO:0005634);|Cellular Component: spindle (GO:0005819);|Cellular Component: microtubule (GO:0005874);|Cellular Component: cell cortex (GO:0005938);|Biological Process: cell cycle (GO:0007049);|Molecular Function: microtubule binding (GO:0008017);|Cellular Component: phragmoplast (GO:0009524);|Biological Process: cortical microtubule organization (GO:0043622);|Molecular Function: protein dimerization activity (GO:0046983);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN29383_c0_g1_i1 6.405956665 12.81191333 0 0 #NAME? 0.000134089 0.000866066 Down 2.252135 1.745371 1.899625 0 0 0 XP_021289381.1 pyruvate decarboxylase 2 [Herrania umbratica] P51851|PDC2_PEA Pyruvate decarboxylase 2 (Fragment) OS=Pisum sativum OX=3888 GN=PDC2 PE=2 SV=1 tcc:TCM_021649 K01568 "E4.1.1.1, pdc" pyruvate decarboxylase ko00010 Glycolysis / Gluconeogenesis KOG1184 Thiamine pyrophosphate-requiring enzyme [EH] METABOLISM|METABOLISM Amino acid transport and metabolism |Coenzyme transport and metabolism GH COG3961 Pyruvate decarboxylase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: pyruvate decarboxylase activity (GO:0004737);|Molecular Function: thiamine pyrophosphate binding (GO:0030976); -- -- TRINITY_DN29384_c0_g1_i4 257.7336726 153.037895 362.4294502 2.368233373 1.243811255 1.09E-13 2.29E-12 Up 3.163851 3.487254 3.760479 7.013249 7.083646 5.770289 XP_011091975.1 phospholipid-transporting ATPase 1 [Sesamum indicum] P98204|ALA1_ARATH Phospholipid-transporting ATPase 1 OS=Arabidopsis thaliana OX=3702 GN=ALA1 PE=2 SV=1 sind:105172290 K14802 "DRS2, ATP8A" phospholipid-transporting ATPase -- -- KOG0206 P-type ATPase [R] POORLY CHARACTERIZED General function prediction only U ENOG410XPYK Phospholipid-transporting atpase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: phospholipid-translocating ATPase activity (GO:0004012);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: phospholipid translocation (GO:0045332); "PF16212.4,PF13246.5,PF00702.25" Phospholipid-translocating P-type ATPase C-terminal|Cation transport ATPase (P-type)|haloacid dehalogenase-like hydrolase TRINITY_DN29386_c0_g2_i3 36.49417396 72.98834791 0 0 #NAME? 8.09E-19 2.45E-17 Down 9.008363 11.61083 15.97686 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29389_c0_g3_i1 21.49363539 30.29124703 12.69602374 0.419131762 -1.254524242 0.024240245 0.079189453 Down 5.024843 3.483487 5.548353 1.930581 0.9612324 1.856956 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29393_c0_g1_i1 64.19448051 33.83549135 94.55346967 2.794505589 1.48259306 4.52E-06 3.89E-05 Up 1.474926 1.520822 1.337801 3.301941 3.507129 2.960653 XP_022861837.1 "beta-D-glucosyl crocetin beta-1,6-glucosyltransferase-like [Olea europaea var. sylvestris]" F8WKW8|UGT9_GARJA "Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase OS=Gardenia jasminoides OX=114476 GN=UGT94E5 PE=1 SV=1" -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase "Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);" PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN29395_c2_g2_i5 70.53247446 124.4542783 16.61067063 0.133468056 -2.9054336 3.55E-17 9.69E-16 Down 6.04343 6.960177 6.866799 1.508823 0.3158849 0.320424 XP_011092328.1 uncharacterized zinc finger protein At4g06634 [Sesamum indicum] Q2V3L3|YY1_ARATH Zinc finger transcription factor YY1 OS=Arabidopsis thaliana OX=3702 GN=YY1 PE=1 SV=1 sind:105172546 K09201 YY transcription factor YY -- -- -- -- -- -- -- S COG5048 Zinc finger protein "Cellular Component: nuclear chromatin (GO:0000790);|Molecular Function: RNA polymerase II proximal promoter sequence-specific DNA binding (GO:0000978);|Molecular Function: RNA polymerase II distal enhancer sequence-specific DNA binding (GO:0000980);|Molecular Function: proximal promoter DNA-binding transcription repressor activity, RNA polymerase II-specific (GO:0001078);|Molecular Function: RNA polymerase II repressing transcription factor binding (GO:0001103);|Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Cellular Component: transcription factor complex (GO:0005667);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: defense response (GO:0006952);|Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to light stimulus (GO:0009416);|Biological Process: response to absence of light (GO:0009646);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);|Cellular Component: PcG protein complex (GO:0031519);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: regulation of defense response to fungus (GO:1900150);|Biological Process: regulation of response to salt stress (GO:1901000);" -- -- TRINITY_DN29398_c0_g2_i2 29.50268568 59.00537137 0 0 #NAME? 7.97E-16 1.96E-14 Down 4.953601 9.677472 8.399135 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29398_c0_g3_i3 53.76459238 107.5291848 0 0 #NAME? 7.58E-26 3.46E-24 Down 11.42893 8.36173 13.85046 0 0 0 XP_012835705.1 PREDICTED: synaptotagmin-2 isoform X1 [Erythranthe guttata] B6ETT4|SYT2_ARATH Synaptotagmin-2 OS=Arabidopsis thaliana OX=3702 GN=SYT2 PE=2 SV=1 -- -- -- -- -- -- KOG1012 "Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain" [R] POORLY CHARACTERIZED General function prediction only S COG5038 Domain-Containing protein Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: Golgi apparatus (GO:0005794);|Biological Process: lipid transport (GO:0006869);|Molecular Function: lipid binding (GO:0008289);|Biological Process: protein secretion (GO:0009306);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN29399_c1_g2_i2 55.79139298 85.22988892 26.35289704 0.309197834 -1.693397882 2.03E-06 1.85E-05 Down 2.054448 1.967985 2.043017 0.4549878 0.5577616 0.4945821 XP_012847791.1 PREDICTED: dynamin-related protein 5A [Erythranthe guttata] F4HPR5|DRP5A_ARATH Dynamin-related protein 5A OS=Arabidopsis thaliana OX=3702 GN=DRP5A PE=2 SV=1 -- -- -- -- -- -- KOG0446 "Vacuolar sorting protein VPS1, dynamin, and related proteins" [UR] CELLULAR PROCESSES AND SIGNALING|POORLY CHARACTERIZED "Intracellular trafficking, secretion, and vesicular transport |General function prediction only " S COG0699 Dynamin family Biological Process: cytokinesis by cell plate formation (GO:0000911);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874);|Molecular Function: microtubule binding (GO:0008017);|Cellular Component: cell plate (GO:0009504);|Cellular Component: phragmoplast (GO:0009524);|Cellular Component: membrane (GO:0016020); PF00350.22 Dynamin family TRINITY_DN2939_c0_g1_i1 5.361537274 0.738117137 9.984957412 13.52760546 3.757834584 0.009609836 0.036852181 Up 0 0 0.4388406 2.073141 1.554245 1.098423 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29402_c2_g1_i1 44.5862599 77.00570108 12.16681872 0.157998935 -2.662013265 0.001176354 0.00602485 Down 10.76717 8.246167 19.89524 3.991467 0.5068387 0.4726882 RAL40031.1 hypothetical protein DM860_008171 [Cuscuta australis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YB9I Tetratricopeptide repeat -- -- -- TRINITY_DN29402_c2_g4_i1 14.21020101 21.78450022 6.635901796 0.304615746 -1.714937574 0.029298042 0.092433001 Down 2.451065 4.268959 1.847087 1.474681 0.2883679 0.2671363 PSR92565.1 Sperm-associated antigen 1A like [Actinidia chinensis var. chinensis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YB9I Tetratricopeptide repeat -- -- -- TRINITY_DN29411_c0_g1_i1 191.4639611 108.0143442 274.9135779 2.545158052 1.347755249 3.66E-12 6.75E-11 Up 4.589962 4.02592 5.104166 9.677804 7.92183 10.60383 XP_011076378.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X6 [Sesamum indicum] Q9C6K9|LRL11_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.1 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- PF14380.5 Wall-associated receptor kinase C-terminal TRINITY_DN29411_c0_g2_i5 299.9614957 164.8831322 435.0398591 2.63847401 1.399703773 3.42E-19 1.06E-17 Up 8.137836 7.580057 7.564208 16.59161 15.67642 17.26452 XP_020549259.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X2 [Sesamum indicum] P0C5E2|LRL12_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.2 PE=2 SV=3 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- PF14380.5 Wall-associated receptor kinase C-terminal TRINITY_DN29411_c0_g3_i1 224.0954732 96.55052211 351.6404244 3.642035452 1.864744966 1.18E-24 5.06E-23 Up 20.76736 14.66402 18.42329 55.73322 54.34082 48.33225 EYU40786.1 hypothetical protein MIMGU_mgv11b002117mg [Erythranthe guttata] Q8VYG0|LRL13_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.3 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.3 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN29411_c0_g4_i3 142.149385 55.76057025 228.5381998 4.098562816 2.035118109 0.000133372 0.000862047 Up 3.562448 3.068828 3.606965 9.434214 15.96348 8.342981 XP_011076378.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X6 [Sesamum indicum] F4HQ17|LRL14_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.4 PE=2 SV=2 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN29411_c0_g5_i2 56.89426705 24.59642491 89.19210919 3.62622249 1.858467445 0.030080979 0.094404445 Up 1.419486 1.521733 0.7850974 1.437921 5.885565 3.482659 XP_011076378.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X6 [Sesamum indicum] P0C5E2|LRL12_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.2 PE=2 SV=3 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN29415_c1_g1_i19 88.44639005 137.1092003 39.78357983 0.290159812 -1.785080377 4.54E-09 5.98E-08 Down 7.581032 5.890407 5.026795 1.166316 1.607962 1.586343 XP_011080776.1 UDP-glycosyltransferase 87A2 [Sesamum indicum] O64733|U87A2_ARATH UDP-glycosyltransferase 87A2 OS=Arabidopsis thaliana OX=3702 GN=UGT87A2 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Biological Process: regulation of flower development (GO:0009909);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); -- -- TRINITY_DN29415_c1_g3_i1 6.530097289 13.06019458 0 0 #NAME? 0.008617013 0.033672432 Down 0.1868961 2.526606 4.953013 4.47E-43 4.89E-44 2.75E-35 PIN03627.1 hypothetical protein CDL12_23863 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29416_c1_g1_i29 303.0892385 413.1042959 193.0741812 0.467373937 -1.09735081 1.51E-12 2.89E-11 Down 6.643154 6.525268 6.256025 2.083364 2.318801 2.926962 RDY09503.1 "Protein ROOT HAIR DEFECTIVE 3-like 1, partial [Mucuna pruriens]" Q9FKE9|RHD32_ARATH Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g45160 PE=2 SV=1 -- -- -- -- -- -- KOG2203 GTP-binding protein [R] POORLY CHARACTERIZED General function prediction only Z ENOG410XPVJ GTPase activity Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: endoplasmic reticulum organization (GO:0007029);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: endoplasmic reticulum membrane fusion (GO:0016320);|Biological Process: endoplasmic reticulum inheritance (GO:0048309); -- -- TRINITY_DN29417_c0_g1_i2 427.3431034 601.3093796 253.3768272 0.421375145 -1.246822875 2.01E-18 5.93E-17 Down 105.8188 115.5539 110.9956 42.03881 26.13678 44.94384 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29417_c1_g7_i1 23.05573409 32.7254343 13.38603388 0.409040679 -1.289683767 0.020674928 0.069631771 Down 7.907374 6.846211 5.670139 0.5004459 3.456589 2.775549 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29422_c0_g1_i14 436.3700669 594.2522431 278.4878906 0.468635826 -1.093460847 1.29E-16 3.37E-15 Down 11.43592 10.28871 11.90225 4.742368 4.211174 3.760123 XP_012829734.1 "PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic [Erythranthe guttata]" Q56XV8|CPNA2_ARATH "Chaperonin 60 subunit alpha 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN60A2 PE=2 SV=1" -- -- -- -- -- -- KOG0356 "Mitochondrial chaperonin, Cpn60/Hsp60p" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0459 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity) Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: cytosol (GO:0005829);|Biological Process: 'de novo' protein folding (GO:0006458);|Biological Process: mitochondrion organization (GO:0007005);|Cellular Component: chloroplast (GO:0009507);|Biological Process: protein refolding (GO:0042026);|Molecular Function: unfolded protein binding (GO:0051082); "PF00118.23,PF13892.5" TCP-1/cpn60 chaperonin family|DNA-binding domain TRINITY_DN29423_c0_g1_i4 513.4817811 340.1807203 686.7828418 2.018876441 1.013552617 1.06E-16 2.78E-15 Up 6.536296 6.460944 6.060518 10.06586 10.87317 10.08841 XP_011093340.1 LOW QUALITY PROTEIN: receptor-like protein kinase HSL1 [Sesamum indicum] O49545|BAME1_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF13855.5,PF12799.6,PF00560.32,PF00069.24,PF08263.11,PF13516.5" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Protein kinase domain|Leucine rich repeat N-terminal domain|Leucine Rich repeat TRINITY_DN29430_c1_g2_i9 44.89734038 69.05564655 20.7390342 0.300323511 -1.735410675 1.46E-05 0.000115066 Down 3.337753 5.251509 3.750561 1.490184 0.7871901 0.7514112 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29430_c2_g1_i19 177.5038272 285.553047 69.45460743 0.243228388 -2.039616472 1.20E-22 4.60E-21 Down 20.27539 19.14374 18.02735 3.686076 3.843213 3.765981 -- -- B3DNN5|CDC16_ARATH Anaphase-promoting complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=APC6 PE=2 SV=1 sind:105176929 K03353 "APC6, CDC16" anaphase-promoting complex subunit 6 ko04120 Ubiquitin mediated proteolysis KOG1173 "Anaphase-promoting complex (APC), Cdc16 subunit" [DO] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning |Posttranslational modification, protein turnover, chaperones " -- -- -- Cellular Component: nucleus (GO:0005634);|Biological Process: cell cycle (GO:0007049);|Biological Process: phloem or xylem histogenesis (GO:0010087);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: regulation of DNA endoreduplication (GO:0032875);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN29444_c0_g2_i1 262.1631303 521.7536963 2.57256429 0.004930611 -7.664017974 1.09E-142 4.42E-140 Down 22.31122 20.09918 21.02827 0.2419103 0 5.68E-48 -- -- Q2R2B1|STLP5_ORYSJ Sialyltransferase-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=STLP5 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: endosome (GO:0005768);|Cellular Component: trans-Golgi network (GO:0005802);|Biological Process: protein glycosylation (GO:0006486);|Molecular Function: sialyltransferase activity (GO:0008373);|Biological Process: pollen germination (GO:0009846);|Biological Process: pollen tube growth (GO:0009860);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN29447_c0_g4_i1 18.01502808 26.03209353 9.997962626 0.38406295 -1.3805853 0.031126646 0.097138211 Down 1.972695 2.568756 1.53742 0.6782675 0.6952182 0.5511528 XP_011071614.1 nuclear ribonuclease Z [Sesamum indicum] -- -- sind:105157018 K00784 rnz ribonuclease Z ko03013 RNA transport -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29450_c0_g6_i1 74.38990522 106.4563301 42.32348038 0.397566592 -1.330731563 0.012446128 0.045679744 Down 28.72697 15.06361 23.21709 13.0469 2.924767 5.495544 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29450_c0_g7_i1 55.03676832 74.36348289 35.71005374 0.480209538 -1.058264037 0.002035572 0.009785104 Down 11.88101 10.17476 13.91478 4.248404 4.586392 4.989848 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29453_c0_g1_i2 44.9080722 76.80499165 13.01115275 0.169405041 -2.56145129 9.57E-10 1.36E-08 Down 4.426148 4.262308 4.649255 0.7267625 0.5150606 0.6074934 PIN05967.1 hypothetical protein CDL12_21491 [Handroanthus impetiginosus] Q6DR10|TBL43_ARATH Protein trichome birefringence-like 43 OS=Arabidopsis thaliana OX=3702 GN=TBL43 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111BK6 Pfam:DUF231 Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: O-acetyltransferase activity (GO:0016413); "PF13839.5,PF14416.5" GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p|PMR5 N terminal Domain TRINITY_DN29458_c0_g3_i1 10.54717447 0.492078091 20.60227085 41.86788889 5.38777227 0.00102955 0.0053576 Up 0.00025734 4.18E-07 0.3409649 1.929615 5.743353 1.956844 XP_012853072.1 PREDICTED: putative disease resistance protein RGA3 [Erythranthe guttata] Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Biological Process: defense response (GO:0006952);|Molecular Function: ADP binding (GO:0043531); PF00931.21 NB-ARC domain TRINITY_DN29487_c0_g3_i1 61.22504276 105.0620329 17.38805265 0.165502724 -2.595073131 1.04E-08 1.31E-07 Down 24.94566 17.84881 15.62878 1.330854 1.373643 5.043814 XP_012851719.1 PREDICTED: serpin-ZX-like [Erythranthe guttata] Q9S7T8|SPZX_ARATH Serpin-ZX OS=Arabidopsis thaliana OX=3702 GN=At1g47710 PE=1 SV=1 -- -- -- -- -- -- KOG2392 Serpin [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms O COG4826 serine-type endopeptidase inhibitor activity Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867);|Molecular Function: cysteine-type endopeptidase inhibitor activity (GO:0004869);|Cellular Component: extracellular space (GO:0005615);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: negative regulation of endopeptidase activity (GO:0010951);|Cellular Component: apoplast (GO:0048046); -- -- TRINITY_DN29489_c0_g1_i1 29.04155933 39.98730807 18.09581058 0.452538854 -1.14388643 0.021131003 0.07084192 Down 6.09042 6.350022 4.81419 2.614731 2.30443 1.424887 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29492_c0_g2_i1 4.196605954 8.393211908 0 0 #NAME? 0.003255969 0.014654663 Down 1.680032 1.043529 1.489756 0 0 0 PIN26102.1 Alpha/beta hydrolase [Handroanthus impetiginosus] -- -- sind:105173836 K07052 K07052 uncharacterized protein -- -- KOG1838 Alpha/beta hydrolase [R] POORLY CHARACTERIZED General function prediction only S COG1266 caax amino terminal protease family protein -- -- -- TRINITY_DN29493_c1_g1_i8 113.601992 190.2690819 36.93490217 0.194119306 -2.364984486 2.29E-19 7.21E-18 Down 7.443763 6.923454 6.18313 0.5145306 1.276014 1.41877 XP_010430719.1 PREDICTED: uncharacterized protein LOC104714953 [Camelina sativa] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- PF13966.5 zinc-binding in reverse transcriptase TRINITY_DN29493_c1_g2_i1 92.15859008 176.9648985 7.352281686 0.041546554 -4.589127374 3.56E-38 2.69E-36 Down 22.9969 30.82134 27.37149 0.9181579 1.328417 0.5031148 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29506_c0_g2_i2 19.42061254 32.15294311 6.688281968 0.208014611 -2.265243225 0.0002634 0.001593567 Down 5.275917 4.496865 7.741383 2.262892 0 0.7262483 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29513_c0_g2_i1 15.39646396 28.86398619 1.928941734 0.066828667 -3.903389083 0.000759871 0.004086829 Down 2.040452 8.924858 7.243193 0 0 1.065047 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29514_c0_g3_i1 25.07746691 16.12407819 34.03085564 2.110561313 1.077626741 0.026494797 0.085193619 Up 4.595358 2.686517 0.346625 4.287727 5.297546 3.450091 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2951_c0_g1_i1 25.61265549 8.100406809 43.12490418 5.323794866 2.412454983 1.24E-05 9.87E-05 Up 0.163466 0.6303875 0.6787175 1.695503 2.388321 2.342904 XP_022898791.1 phytochrome E isoform X1 [Olea europaea var. sylvestris] P55004|PHYE_IPONI Phytochrome E OS=Ipomoea nil OX=35883 GN=PHYE PE=2 SV=1 gra:105776357 K12123 PHYE phytochrome E -- -- -- -- -- -- -- -- -- -- "Molecular Function: phosphorelay sensor kinase activity (GO:0000155);|Cellular Component: intracellular (GO:0005622);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: detection of visible light (GO:0009584);|Biological Process: red, far-red light phototransduction (GO:0009585);|Molecular Function: photoreceptor activity (GO:0009881);|Biological Process: protein-tetrapyrrole linkage (GO:0017006);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: protein homodimerization activity (GO:0042803);" PF08446.10 PAS fold TRINITY_DN29535_c1_g3_i1 14.75948006 21.83818489 7.680775229 0.351713078 -1.507529113 0.03223172 0.100013293 Down 4.20896 2.292412 3.995093 2.0117 1.001588 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29535_c1_g4_i9 50.7992676 76.59880004 24.99973516 0.326372412 -1.61540898 2.12E-05 0.000161504 Down 2.862414 2.963983 2.221693 1.042491 0.8068931 0.2737582 XP_011098432.1 uncharacterized protein LOC105177098 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29537_c0_g1_i2 73.23215286 146.1020705 0.362235236 0.00247933 -8.65583402 2.61E-44 2.39E-42 Down 7.54091 6.923396 7.853256 4.04E-26 0.04469532 3.48E-20 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2953_c0_g1_i1 17.98262218 33.70535177 2.259892593 0.06704848 -3.89865157 2.88E-07 2.99E-06 Down 2.709229 3.324351 1.758945 0.1807253 0 0.1874636 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29541_c0_g2_i1 27692.77713 38337.38248 17048.17178 0.444687944 -1.169134804 6.77E-100 1.68E-97 Down 1692.224 1713.016 1754.939 631.4526 643.8439 575.5599 XP_011084475.1 acidic endochitinase SE2-like [Sesamum indicum] P23472|CHLY_HEVBR Hevamine-A OS=Hevea brasiliensis OX=3981 PE=1 SV=2 sind:105166717 K01183 E3.2.1.14 chitinase ko00520 Amino sugar and nucleotide sugar metabolism KOG4701 Chitinase [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis G ENOG4111GPA chitinase Biological Process: polysaccharide catabolic process (GO:0000272);|Molecular Function: lysozyme activity (GO:0003796);|Molecular Function: chitinase activity (GO:0004568);|Cellular Component: vacuole (GO:0005773);|Biological Process: chitin catabolic process (GO:0006032); PF00704.27 Glycosyl hydrolases family 18 TRINITY_DN29546_c0_g1_i7 4476.956434 7019.482064 1934.430804 0.275580276 -1.859455461 2.01E-170 1.11E-167 Down 337.5819 359.6328 337.2874 75.76925 74.90474 79.3796 EYU32912.1 hypothetical protein MIMGU_mgv1a010549mg [Erythranthe guttata] E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea OX=4146 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y0DY Isoflavone reductase Cellular Component: cytoplasm (GO:0005737);|Molecular Function: oxidoreductase activity (GO:0016491); PF05368.12 NmrA-like family TRINITY_DN29547_c0_g1_i1 34.44082201 47.29018521 21.59145881 0.456573784 -1.131080071 0.013095283 0.047747362 Down 6.142925 4.607814 3.531611 1.833566 1.493764 1.937242 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29547_c2_g1_i5 29.9789122 46.11744083 13.84038356 0.3001117 -1.736428531 0.000331264 0.001959226 Down 5.841459 6.077107 6.500652 1.916707 0.643969 1.889238 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29547_c2_g2_i1 18.5900828 32.40290552 4.777260079 0.147433077 -2.761867857 4.84E-05 0.000344026 Down 3.199514 4.436771 2.338926 0.3201025 0.6163361 0.1730591 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29547_c2_g3_i1 27.19212457 44.68841032 9.695838826 0.2169654 -2.204463103 3.98E-05 0.000287831 Down 10.08447 5.59851 5.968576 1.160202 1.14343 1.522464 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29556_c0_g1_i2 265.6921551 167.5599952 363.824315 2.171307743 1.118564216 2.86E-12 5.30E-11 Up 16.76276 14.19174 11.33457 26.79383 23.72275 23.38257 PIN25040.1 H+/oligopeptide symporter [Handroanthus impetiginosus] O80436|PTR29_ARATH Protein NRT1/ PTR FAMILY 5.5 OS=Arabidopsis thaliana OX=3702 GN=NPF5.5 PE=2 SV=1 sind:105174544 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Molecular Function: peptide:proton symporter activity (GO:0015333);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oligopeptide transmembrane transporter activity (GO:0035673);|Molecular Function: peptide transmembrane transporter activity (GO:1904680); PF00854.20 POT family TRINITY_DN29562_c2_g3_i2 37.91325416 63.88378212 11.94272621 0.18694457 -2.419317524 8.50E-08 9.46E-07 Down 4.434542 4.995363 4.567596 0.8238468 0.4145079 0.8460482 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29570_c0_g1_i4 255.6189828 144.7069675 366.530998 2.532918797 1.340800826 1.59E-15 3.82E-14 Up 2.883707 2.43404 2.808044 5.732855 5.207124 5.676581 KZV14417.1 putative LRR receptor-like serine/threonine-protein kinase [Dorcoceras hygrometricum] Q1MX30|XA21_ORYSI Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: positive regulation of defense response (GO:0031349);|Biological Process: protein autophosphorylation (GO:0046777);|Biological Process: positive regulation of defense response to bacterium (GO:1900426); "PF13855.5,PF00069.24,PF07714.16,PF12799.6,PF00560.32" Leucine rich repeat|Protein kinase domain|Protein tyrosine kinase|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN29573_c0_g2_i1 40.53495879 67.47207776 13.59783982 0.201532845 -2.310913109 0.011986096 0.044288449 Down 9.94356 18.88543 7.655444 5.863237 0 9.35E-38 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29576_c0_g2_i1 97.47049963 190.4423099 4.498689391 0.023622321 -5.403705462 7.17E-47 7.06E-45 Down 4.177587 4.065509 4.961437 0.04776529 0.08783953 0.1296902 PIN13227.1 AAA+-type ATPase containing the peptidase M41 domain [Handroanthus impetiginosus] Q8LQJ8|FTSH5_ORYSJ "ATP-dependent zinc metalloprotease FTSH 5, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=FTSH5 PE=3 SV=1" -- -- -- -- -- -- KOG0734 AAA+-type ATPase containing the peptidase M41 domain [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0465 "Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)" Molecular Function: ATP-dependent peptidase activity (GO:0004176);|Molecular Function: metalloendopeptidase activity (GO:0004222);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: proteolysis (GO:0006508);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: membrane (GO:0016020);|Molecular Function: metal ion binding (GO:0046872); "PF00004.28,PF06068.12,PF01434.17" ATPase family associated with various cellular activities (AAA)|TIP49 C-terminus|Peptidase family M41 TRINITY_DN29578_c0_g1_i1 36.1079417 72.2158834 0 0 #NAME? 0.002482945 0.01159739 Down 3.653889 30.63593 7.584326 0 4.61E-45 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29578_c1_g1_i2 18.86843036 28.34841964 9.388441078 0.331180404 -1.594310783 0.008912566 0.03460805 Down 2.369793 2.097267 2.376044 0.3685994 0.4576819 0.9931266 KZV23091.1 hypothetical protein F511_06615 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XUP5 expressed protein -- -- -- TRINITY_DN29578_c2_g2_i1 4.512916927 9.025833854 0 0 #NAME? 0.021174236 0.070955418 Down 5.87E-10 1.937625 3.627385 9.09E-11 4.10E-05 4.57E-42 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29590_c0_g1_i1 15.8828555 23.55045681 8.215254191 0.348836299 -1.519377924 0.025153205 0.081602304 Down 5.539177 3.405452 3.660821 0.3686042 1.467357 1.700108 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29609_c0_g2_i8 25.01152397 39.26651383 10.75653411 0.27393657 -1.86808622 0.000493131 0.002791108 Down 2.305966 2.657079 2.977827 0.7205225 0.5546939 0.4983747 XP_011100716.1 E3 ubiquitin-protein ligase UPL6 isoform X1 [Sesamum indicum] Q8RWB8|UPL6_ARATH E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana OX=3702 GN=UPL6 PE=2 SV=1 sind:105178855 K10589 UBE3C ubiquitin-protein ligase E3 C ko04120 Ubiquitin mediated proteolysis KOG0942 E3 ubiquitin protein ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG5021 ubiquitin protein ligase Biological Process: protein polyubiquitination (GO:0000209);|Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);|Molecular Function: ubiquitin conjugating enzyme activity (GO:0061631); -- -- TRINITY_DN29609_c0_g3_i1 9.362055163 3.826207433 14.89790289 3.89364747 1.961122269 0.021340224 0.071369395 Up 0.9114168 0.8924764 8.07E-59 0.8243405 2.496569 2.46694 XP_026435029.1 E3 ubiquitin-protein ligase UPL6-like isoform X1 [Papaver somniferum] Q8RWB8|UPL6_ARATH E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana OX=3702 GN=UPL6 PE=2 SV=1 csv:101218340 K10589 UBE3C ubiquitin-protein ligase E3 C ko04120 Ubiquitin mediated proteolysis KOG0942 E3 ubiquitin protein ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG5021 ubiquitin protein ligase Biological Process: protein polyubiquitination (GO:0000209);|Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);|Molecular Function: ubiquitin conjugating enzyme activity (GO:0061631); -- -- TRINITY_DN29611_c0_g1_i2 27.15295821 53.57089805 0.735018369 0.013720479 -6.187525367 3.69E-07 3.77E-06 Down 4.734863 1.741981 5.435033 0.1264229 1.88E-10 2.02E-38 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29611_c0_g5_i1 30.65542775 61.3108555 0 0 #NAME? 2.38E-14 5.19E-13 Down 6.337786 10.36056 13.03648 0 0 0 XP_012837541.1 PREDICTED: uncharacterized protein LOC105958084 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41108CG NA -- -- -- TRINITY_DN29617_c0_g4_i1 7.516232567 15.03246513 0 0 #NAME? 2.60E-05 0.00019435 Down 2.19746 1.194127 1.90085 2.07E-49 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29617_c0_g5_i1 46.82420629 66.33180662 27.31660595 0.411817608 -1.279922578 0.022778092 0.075307058 Down 9.305073 6.684371 11.02588 1.337954 1.32346 6.408474 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2961_c0_g1_i1 10.10838055 17.20357098 3.013190124 0.175149109 -2.513344448 0.005467464 0.022882503 Down 1.351514 1.40339 1.226505 0.2517752 0 0.2627223 CDP14470.1 unnamed protein product [Coffea canephora] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN29621_c0_g1_i1 23.24650525 32.26192396 14.23108654 0.441110907 -1.180786662 0.038891966 0.116019784 Down 4.106055 6.61049 2.828309 0.9472725 1.414661 2.379818 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29621_c0_g5_i1 30.7540478 12.77866916 48.72942643 3.813341264 1.931055647 0.015998858 0.056297377 Up 0.5249861 0.8973151 0.9796241 1.442967 3.975833 1.963797 PSR95439.1 Structural maintenance of chromosomes protein like [Actinidia chinensis var. chinensis] Q56YN8|SMC3_ARATH Structural maintenance of chromosomes protein 3 OS=Arabidopsis thaliana OX=3702 GN=SMC3 PE=2 SV=1 -- -- -- -- -- -- KOG0964 "Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3)" [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D COG1196 Required for chromosome condensation and partitioning (By similarity) "Cellular Component: chromosome, centromeric region (GO:0000775);|Cellular Component: chromatin (GO:0000785);|Molecular Function: chromatin binding (GO:0003682);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: spindle (GO:0005819);|Biological Process: DNA repair (GO:0006281);|Biological Process: chromosome segregation (GO:0007059);|Biological Process: sister chromatid cohesion (GO:0007062);|Cellular Component: cohesin complex (GO:0008278);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: nuclear matrix (GO:0016363);|Biological Process: cell division (GO:0051301);|Biological Process: meiotic cell cycle (GO:0051321);" -- -- TRINITY_DN29626_c0_g3_i2 10.37236626 20.74473251 0 0 #NAME? 4.75E-07 4.79E-06 Down 4.078876 3.30465 2.636067 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29654_c0_g3_i1 22.60642611 31.90730694 13.30554528 0.417006215 -1.261859211 0.023525721 0.077261108 Down 2.099242 3.225874 2.487089 1.355826 0.6801802 0.5303874 PIN13388.1 hypothetical protein CDL12_13989 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29659_c2_g2_i3 3838.919115 7677.83823 0 0 #NAME? 0 0 Down 799.4121 736.3652 703.3651 3.02E-66 1.06E-69 7.44E-57 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF07172.10 Glycine rich protein family TRINITY_DN29659_c2_g3_i1 12774.73106 25538.25686 11.20525052 0.000438763 -11.15426944 0 0 Down 2128.462 2125.618 2026.26 1.088364 0.2690432 0.8486429 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF07172.10 Glycine rich protein family TRINITY_DN29659_c2_g4_i1 3552.40435 7103.312652 1.496047164 0.000210613 -12.21312061 0 0 Down 1154.018 1038.568 998.2391 1.26E-79 0.2772454 0.3129267 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF07172.10 Glycine rich protein family TRINITY_DN29667_c1_g2_i7 120.945125 234.3966497 7.493600353 0.031969742 -4.967149101 5.81E-41 4.81E-39 Down 12.14007 13.18872 16.51989 0.3838781 0.190981 0.5033415 XP_011092529.1 transcription factor bHLH113-like [Sesamum indicum] Q9LT67|BH113_ARATH Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YS5T Transcription factor "Molecular Function: DNA-binding transcription activator activity, RNA polymerase II-specific (GO:0001228);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: protein dimerization activity (GO:0046983);" -- -- TRINITY_DN29681_c0_g1_i1 37.23998037 17.10935547 57.37060527 3.353171623 1.745526326 0.003122661 0.014140758 Up 4.692544 3.642697 2.260938 7.18665 7.249085 14.64935 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29681_c2_g4_i2 99.77592106 133.34153 66.21031216 0.496546816 -1.009998349 0.000104203 0.000688614 Down 9.477118 11.20702 9.871732 4.399329 3.607486 4.255504 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29683_c0_g4_i1 5.602349448 11.2046989 0 0 #NAME? 0.00037954 0.002209346 Down 0.6897352 0.9154606 1.376851 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29689_c0_g4_i1 6.242519842 12.12280445 0.362235236 0.029880482 -5.064652788 0.000826382 0.004412133 Down 1.187468 1.394905 2.789781 3.53E-15 0.08556898 0 EPS67014.1 "hypothetical protein M569_07760, partial [Genlisea aurea]" A3ABE1|PPR5_ORYSJ "Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0750400 PE=3 SV=2" -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein Biological Process: mRNA processing (GO:0006397);|Biological Process: regulation of translation (GO:0006417);|Biological Process: RNA splicing (GO:0008380);|Cellular Component: chloroplast (GO:0009507); "PF13041.5,PF12854.6,PF01535.19,PF13812.5" PPR repeat family|PPR repeat|PPR repeat|Pentatricopeptide repeat domain TRINITY_DN29692_c0_g1_i12 178.6571344 341.9599183 15.35435057 0.044901024 -4.477107836 7.94E-69 1.31E-66 Down 11.65343 10.41302 9.499772 0.1540168 0.4077347 0.5832177 EYU40741.1 hypothetical protein MIMGU_mgv1a001632mg [Erythranthe guttata] Q9C6C3|AGD2_ARATH ADP-ribosylation factor GTPase-activating protein AGD2 OS=Arabidopsis thaliana OX=3702 GN=AGD2 PE=2 SV=1 egu:105034565 K12489 ACAP "Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein" ko04144 Endocytosis KOG0521 Putative GTPase activating proteins (GAPs) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms U COG5347 "domain, ankyrin repeat and PH domain" Molecular Function: GTPase activator activity (GO:0005096);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN29692_c0_g3_i1 23.04231718 46.08463437 0 0 #NAME? 4.67E-15 1.08E-13 Down 4.022818 3.314341 3.779194 1.84E-41 4.30E-74 0 PIN12765.1 hypothetical protein CDL12_14631 [Handroanthus impetiginosus] O65451|FB333_ARATH Probable F-box protein At4g22030 OS=Arabidopsis thaliana OX=3702 GN=At4g22030 PE=4 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBD5 F-box protein At4g22030-like -- PF14476.5 Petal formation-expressed TRINITY_DN29695_c1_g2_i1 14.98931341 23.70496025 6.273666561 0.264656278 -1.917808216 0.012257154 0.045113839 Down 3.312914 1.396234 2.166245 1.089318 0.1798482 0.2112503 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29695_c1_g4_i1 65.38713256 90.27676271 40.4975024 0.448592763 -1.156521749 0.008730103 0.034028772 Down 3.494881 1.831137 2.261281 0.6591287 1.091451 0.9757837 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29702_c0_g1_i1 98.1735444 56.9525992 139.3944896 2.447552729 1.291339941 5.84E-07 5.81E-06 Up 2.51848 2.063896 1.73031 4.078154 4.084322 4.32146 XP_012850163.1 PREDICTED: wall-associated receptor kinase 5-like [Erythranthe guttata] Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN29702_c0_g2_i2 14.9573151 5.716506085 24.19812411 4.233026913 2.081689661 0.003361586 0.015064908 Up 1.299318 1.05E-99 0.9152702 3.318709 1.560287 2.5538 XP_011077656.1 wall-associated receptor kinase 2 [Sesamum indicum] Q8VYA3|WAKLJ_ARATH Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana OX=3702 GN=WAKL10 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN29702_c2_g1_i1 4.288924372 0 8.577848744 Inf Inf 0.001545699 0.007677419 Up 0 0 0 1.086264 0.3985718 0.8885451 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN29711_c0_g3_i1 25.11205112 37.59100656 12.63309567 0.33606697 -1.57317934 0.003148246 0.014242411 Down 6.952148 5.95377 6.005436 1.702604 1.72537 1.703533 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29717_c1_g1_i2 29.30241732 16.78598611 41.81884853 2.491295313 1.316896046 0.007793857 0.030941625 Up 0.735867 1.892042 2.095829 3.530764 3.396617 2.460317 XP_011090604.1 cytochrome P450 CYP736A12-like [Sesamum indicum] H2DH18|C7A12_PANGI Cytochrome P450 CYP736A12 OS=Panax ginseng OX=4054 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN29719_c1_g3_i1 26.81394865 36.60332989 17.0245674 0.465109799 -1.104356761 0.026813819 0.086018354 Down 4.532798 4.184671 5.569302 1.718238 2.129892 1.431847 XP_022847372.1 G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 [Olea europaea var. sylvestris] Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana OX=3702 GN=RLK1 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- T ENOG410YBN4 G-type lectin S-receptor-like serine threonine-protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN29721_c0_g2_i2 21.82332305 43.6466461 0 0 #NAME? 2.84E-14 6.14E-13 Down 6.539529 4.378518 5.456644 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29721_c0_g5_i1 5.183056631 0.738117137 9.627996125 13.04399484 3.705313871 0.012020712 0.044387553 Up 0 0 0.470416 2.327648 1.173698 1.218997 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29722_c0_g2_i2 144.5030076 268.4337786 20.57223649 0.076638032 -3.705795678 9.33E-46 8.92E-44 Down 29.56376 36.81335 37.66034 0.8206108 2.460035 3.125267 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29722_c0_g3_i1 23.96282212 47.92564425 0 0 #NAME? 3.17E-07 3.28E-06 Down 12.03286 7.31143 3.831679 5.34E-45 5.96E-38 4.96E-29 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29729_c0_g1_i2 13.40848836 26.81697672 0 0 #NAME? 6.33E-09 8.18E-08 Down 3.368529 3.11514 1.978225 0 0 0 XP_019197952.1 PREDICTED: exopolygalacturonase clone GBGE184-like [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29729_c1_g2_i2 116.9877804 204.2577863 29.7177745 0.145491514 -2.78099309 1.94E-25 8.69E-24 Down 18.89385 20.32165 18.88271 1.993222 2.445633 2.298511 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29733_c0_g1_i2 124.0089955 62.40178516 185.6162057 2.974533585 1.572663468 2.04E-11 3.51E-10 Up 0.9622738 0.88672 0.7860133 2.090859 2.401684 1.848372 XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" "PF03732.16,PF00078.26" Retrotransposon gag protein|Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN29737_c1_g1_i2 84.9294011 119.8510692 50.00773297 0.417248952 -1.261019671 1.38E-05 0.000108775 Down 4.186 5.069258 3.297134 1.241316 1.733443 1.25601 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29741_c0_g1_i1 6.658756654 13.31751331 0 0 #NAME? 9.09E-05 0.000607963 Down 1.658289 1.102813 1.449203 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29741_c0_g4_i1 3.967749542 7.935499085 0 0 #NAME? 0.004327449 0.018747459 Down 1.142884 0.5624805 1.331533 8.77E-75 8.61E-65 4.77E-75 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29751_c0_g2_i1 15.71485466 4.660098879 26.76961045 5.744429709 2.522163673 0.005138859 0.021688081 Up 1.167205 0 1.505149 1.717317 5.640978 4.820654 XP_011071129.1 uncharacterized protein LOC105156631 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111S54 carboxyl-terminal peptidase -- -- -- TRINITY_DN29751_c0_g4_i1 24.42495769 48.84991537 0 0 #NAME? 2.76E-07 2.87E-06 Down 7.536846 7.71686 2.126185 0 0 5.09E-95 PIN10185.1 hypothetical protein CDL12_17228 [Handroanthus impetiginosus] Q9LJN8|BUB31_ARATH Mitotic checkpoint protein BUB3.1 OS=Arabidopsis thaliana OX=3702 GN=BUB3.1 PE=1 SV=1 -- -- -- -- -- -- KOG1036 "Mitotic spindle checkpoint protein BUB3, WD repeat superfamily" [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " S ENOG410XRBG Mitotic checkpoint protein Cellular Component: kinetochore (GO:0000776);|Cellular Component: condensed chromosome kinetochore (GO:0000777);|Cellular Component: kinetochore microtubule (GO:0005828);|Cellular Component: spindle microtubule (GO:0005876);|Biological Process: chromosome segregation (GO:0007059);|Biological Process: mitotic spindle assembly checkpoint (GO:0007094);|Cellular Component: phragmoplast (GO:0009524);|Cellular Component: mitotic checkpoint complex (GO:0033597);|Molecular Function: ubiquitin binding (GO:0043130);|Biological Process: cell division (GO:0051301);|Biological Process: meiotic cell cycle (GO:0051321);|Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);|Cellular Component: bub1-bub3 complex (GO:1990298); -- -- TRINITY_DN29751_c0_g5_i1 51.30962529 101.1179295 1.501321113 0.01484723 -6.073662434 1.86E-27 9.28E-26 Down 7.342592 6.289356 6.419584 0.07020143 0.07071773 0.1522237 KZV53423.1 hypothetical protein F511_10209 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- "PF14223.5,PF03732.16" gag-polypeptide of LTR copia-type|Retrotransposon gag protein TRINITY_DN29751_c0_g6_i1 76.53278432 135.6239285 17.44164012 0.128602971 -2.959004124 6.53E-19 1.99E-17 Down 23.74757 22.89032 22.12278 1.816813 3.009063 2.397522 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29759_c0_g2_i1 72.40547474 97.01636219 47.79458729 0.492644604 -1.021380841 0.001073981 0.005563939 Down 6.485138 7.138756 5.00901 1.587687 3.432799 2.381177 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29761_c1_g2_i3 62.96810933 124.4872777 1.448940942 0.011639269 -6.424855707 1.17E-08 1.46E-07 Down 4.993541 4.273382 9.886207 1.69E-07 0.188682 1.71E-20 XP_011089267.1 receptor-like serine/threonine-protein kinase NCRK isoform X1 [Sesamum indicum] P85200|PRS6B_HELAN 26S proteasome regulatory subunit 6B homolog OS=Helianthus annuus OX=4232 PE=1 SV=1 -- -- -- -- -- -- KOG0727 "26S proteasome regulatory complex, ATPase RPT3" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG1222 26S protease regulatory subunit -- -- -- TRINITY_DN29761_c1_g3_i2 62.53612737 96.58705993 28.48519482 0.294917299 -1.761617647 0.000106269 0.000700431 Down 7.184787 13.39207 11.11601 3.933262 1.874353 1.684346 PWA38181.1 26S proteasome regulatory subunit 6B [Artemisia annua] P85200|PRS6B_HELAN 26S proteasome regulatory subunit 6B homolog OS=Helianthus annuus OX=4232 PE=1 SV=1 bvg:104899087 K03063 "PSMC4, RPT3" 26S proteasome regulatory subunit T3 ko03050 Proteasome KOG0727 "26S proteasome regulatory complex, ATPase RPT3" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG1222 26S protease regulatory subunit -- PF00004.28 ATPase family associated with various cellular activities (AAA) TRINITY_DN29764_c0_g2_i1 272.7125324 374.0361956 171.3888692 0.458214663 -1.12590447 1.52E-05 0.000118843 Down 36.17106 24.63357 26.80762 9.554469 10.19274 12.6579 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29764_c0_g4_i1 22.82299048 32.7343146 12.91166636 0.394438268 -1.342128567 0.016716369 0.058311393 Down 2.28236 1.52969 1.760553 0.6284649 0.7503255 0.3516944 XP_011084575.1 caffeic acid 3-O-methyltransferase [Sesamum indicum] Q9FQY8|COMT1_CAPAN Caffeic acid 3-O-methyltransferase OS=Capsicum annuum OX=4072 GN=COMT PE=2 SV=2 sind:105166789 K13066 "E2.1.1.68, COMT" caffeic acid 3-O-methyltransferase ko00940 Phenylpropanoid biosynthesis KOG3178 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS7T o-methyltransferase Biological Process: lignin biosynthetic process (GO:0009809);|Molecular Function: protein dimerization activity (GO:0046983);|Molecular Function: caffeate O-methyltransferase activity (GO:0047763); "PF08100.10,PF00891.17" Dimerisation domain|O-methyltransferase TRINITY_DN29767_c2_g1_i1 7.247369967 2.052526471 12.44221346 6.061901582 2.599770429 0.032894148 0.101635799 Up 0 0.6962887 0.2758329 2.180035 2.472357 0.3324263 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29769_c0_g2_i1 96.47615534 61.43560044 131.5167102 2.140724747 1.098099307 0.000803723 0.004303304 Up 1.790099 5.998002 4.809665 7.20973 6.226337 8.243039 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29769_c0_g6_i1 18.54774377 26.31785765 10.7776299 0.409517752 -1.288002103 0.0300034 0.09423264 Down 2.483403 2.676584 4.488915 1.717809 0.5770973 0.9202299 PNX95481.1 putative folate-biopterin transporter 7-like protein [Trifolium pratense] Q9XIQ7|FBT7_ARATH Probable folate-biopterin transporter 7 OS=Arabidopsis thaliana OX=3702 GN=At1g64890 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- G ENOG410XRKZ BT1 family Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN29773_c1_g2_i1 9.124614835 15.28314577 2.966083902 0.194075483 -2.365310214 0.013588759 0.049248265 Down 2.234325 1.969223 1.689692 0.3998921 0.1973067 0.2052272 XP_011078389.1 receptor-like serine/threonine-protein kinase At3g01300 [Sesamum indicum] Q9SRH7|Y3130_ARATH Receptor-like serine/threonine-protein kinase At3g01300 OS=Arabidopsis thaliana OX=3702 GN=At3g01300 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN29773_c1_g5_i1 10.58873374 20.02010244 1.15736504 0.057810146 -4.11253348 0.031653196 0.098473958 Down 1.445184 5.782094 1.11032 0 0 0.3741664 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29775_c0_g3_i5 93.87238552 163.7846354 23.96013568 0.146290497 -2.773092041 1.07E-20 3.65E-19 Down 8.9731 7.525222 8.483093 1.52846 0.9298446 0.5002359 XP_012833157.1 "PREDICTED: electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial [Erythranthe guttata]" Q337B8|ETFQO_ORYSJ "Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0516300 PE=3 SV=1" bvg:104888845 K00311 ETFDH electron-transferring-flavoprotein dehydrogenase -- -- KOG2415 Electron transfer flavoprotein ubiquinone oxidoreductase [C] METABOLISM Energy production and conversion C COG0644 geranylgeranyl reductase "Molecular Function: electron-transferring-flavoprotein dehydrogenase activity (GO:0004174);|Molecular Function: electron transfer activity (GO:0009055);|Cellular Component: integral component of mitochondrial inner membrane (GO:0031305);|Molecular Function: oxidoreductase activity, oxidizing metal ions with flavin as acceptor (GO:0043783);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: ubiquinone binding (GO:0048039);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);" -- -- TRINITY_DN29775_c0_g4_i1 72.31104244 133.5398739 11.08221102 0.08298803 -3.590952935 4.95E-17 1.33E-15 Down 14.38185 11.16795 9.204445 1.10666 0.7713987 0.4748963 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29775_c0_g5_i1 25.55687969 38.7145855 12.39917389 0.320271384 -1.642633194 0.001627289 0.008029953 Down 7.59616 7.482159 8.148629 2.322429 0.7680726 3.08722 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29778_c1_g4_i1 37.68633191 68.98159103 6.3910728 0.092648962 -3.432081378 4.66E-12 8.49E-11 Down 3.36679 3.511164 2.17431 0.1657726 0.1644499 0.3905244 XP_019451803.1 PREDICTED: uncharacterized protein LOC109353899 [Lupinus angustifolius] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- "PF13855.5,PF12799.6" Leucine rich repeat|Leucine Rich repeats (2 copies) TRINITY_DN29783_c0_g2_i2 230.8702969 137.9202867 323.8203072 2.347880178 1.231358784 1.10E-12 2.11E-11 Up 6.390761 4.399399 4.772286 10.52906 9.935662 8.947898 KZV57929.1 whitefly-induced gp91-phox [Dorcoceras hygrometricum] Q2HXL0|RBOHC_SOLTU Respiratory burst oxidase homolog protein C OS=Solanum tuberosum OX=4113 GN=RBOHC PE=1 SV=2 sind:105158270 K13447 RBOH respiratory burst oxidase ko04626 Plant-pathogen interaction KOG0039 "Ferric reductase, NADH/NADPH oxidase and related proteins" [PQ] METABOLISM|METABOLISM "Inorganic ion transport and metabolism |Secondary metabolites biosynthesis, transport and catabolism " U ENOG410XNZY NADPH Oxidase "Molecular Function: peroxidase activity (GO:0004601);|Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor (GO:0050664);" "PF08030.11,PF08022.11,PF01794.18" Ferric reductase NAD binding domain|FAD-binding domain|Ferric reductase like transmembrane component TRINITY_DN29786_c0_g1_i6 51.31912042 26.51644724 76.1217936 2.870738787 1.521422064 3.23E-05 0.000237782 Up 1.357474 0.7511645 1.258415 2.69696 2.610639 2.535981 XP_012850643.1 PREDICTED: MATE efflux family protein LAL5-like [Erythranthe guttata] Q9LUH2|DTX19_ARATH Protein DETOXIFICATION 19 OS=Arabidopsis thaliana OX=3702 GN=DTX19 PE=2 SV=1 sind:105176981 K03327 "TC.MATE, SLC47A, norM, mdtK, dinF" "multidrug resistance protein, MATE family" -- -- KOG1347 "Uncharacterized membrane protein, predicted efflux pump" [R] POORLY CHARACTERIZED General function prediction only V COG0534 Mate efflux family protein Biological Process: drug transmembrane transport (GO:0006855);|Biological Process: response to toxic substance (GO:0009636);|Molecular Function: drug transmembrane transporter activity (GO:0015238);|Molecular Function: antiporter activity (GO:0015297);|Cellular Component: integral component of membrane (GO:0016021); PF01554.17 MatE TRINITY_DN29788_c1_g3_i4 42.34654186 58.83158335 25.86150037 0.43958532 -1.185784888 0.003306084 0.014848429 Down 1.616446 2.877182 2.338118 0.8899027 0.4163918 1.12178 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29788_c1_g5_i1 25.12863311 14.08267422 36.17459201 2.568730302 1.361055426 0.009876358 0.037677512 Up 3.201814 1.504836 2.866692 5.755528 3.974742 6.094589 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29795_c0_g1_i18 3487.590547 1264.421797 5710.759296 4.516498615 2.175204766 2.94E-207 2.22E-204 Up 62.29677 63.31425 65.87621 233.5298 235.4319 229.0458 AAR89811.1 reductase 1 [Hydrangea macrophylla] Q9SQ64|COR2_PAPSO Non-functional NADPH-dependent codeinone reductase 2 OS=Papaver somniferum OX=3469 GN=COR2 PE=1 SV=1 -- -- -- -- -- -- KOG1577 Aldo/keto reductase family proteins [R] POORLY CHARACTERIZED General function prediction only S COG0656 reductase Cellular Component: cytosol (GO:0005829);|Molecular Function: oxidoreductase activity (GO:0016491); PF00248.20 Aldo/keto reductase family TRINITY_DN29798_c1_g2_i16 166.7803037 281.7576495 51.80295795 0.183856438 -2.443348396 8.01E-29 4.31E-27 Down 11.25142 12.13225 11.29719 2.226454 1.089646 1.853619 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29800_c1_g4_i1 16.54810475 24.99344692 8.102762584 0.324195483 -1.625064107 0.013984542 0.050429004 Down 2.990476 2.547822 3.223182 0.2947242 1.46297 0.5894904 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29803_c0_g2_i1 6.081124504 12.16224901 0 0 #NAME? 0.000210656 0.001304191 Down 2.712444 0.8566883 2.055143 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29812_c0_g1_i19 405.2908513 590.8410621 219.7406406 0.371911593 -1.426968375 1.14E-11 2.00E-10 Down 11.37445 10.06152 8.466977 2.398759 2.840503 3.76298 KMZ73012.1 putative Oxysterol-binding protein [Zostera marina] Q9SU36|ORP2B_ARATH Oxysterol-binding protein-related protein 2B OS=Arabidopsis thaliana OX=3702 GN=ORP2B PE=2 SV=2 pda:103701844 K20456 OSBP oxysterol-binding protein 1 -- -- KOG1737 Oxysterol-binding protein [I] METABOLISM Lipid transport and metabolism S ENOG410XP9E Oxysterol-binding protein Cellular Component: cytosol (GO:0005829);|Molecular Function: lipid binding (GO:0008289);|Molecular Function: sterol transporter activity (GO:0015248);|Cellular Component: membrane (GO:0016020);|Molecular Function: sterol binding (GO:0032934);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231); -- -- TRINITY_DN29813_c0_g2_i1 9.611084943 19.22216989 0 0 #NAME? 1.43E-05 0.000112769 Down 6.498063 3.753386 2.032105 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29816_c3_g1_i1 30.90716782 61.81433564 0 0 #NAME? 8.36E-13 1.62E-11 Down 6.009728 7.739587 3.461507 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29818_c1_g2_i5 420.1075727 276.9936491 563.2214963 2.03333722 1.023849499 2.01E-14 4.41E-13 Up 15.67207 15.24271 15.70527 24.1886 26.32907 25.93344 XP_021598262.1 peroxisomal (S)-2-hydroxy-acid oxidase GLO1 isoform X2 [Manihot esculenta] P05414|GOX_SPIOL Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea OX=3562 PE=1 SV=1 mdm:103435655 K11517 HAO (S)-2-hydroxy-acid oxidase ko00630|ko04146 Glyoxylate and dicarboxylate metabolism|Peroxisome KOG0538 Glycolate oxidase [C] METABOLISM Energy production and conversion C COG1304 "Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) (By similarity)" Cellular Component: peroxisome (GO:0005777);|Biological Process: oxidative photosynthetic carbon pathway (GO:0009854);|Molecular Function: FMN binding (GO:0010181);|Molecular Function: very-long-chain-(S)-2-hydroxy-acid oxidase activity (GO:0052852);|Molecular Function: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity (GO:0052853);|Molecular Function: medium-chain-(S)-2-hydroxy-acid oxidase activity (GO:0052854); PF01070.17 FMN-dependent dehydrogenase TRINITY_DN29827_c0_g3_i1 12.26786705 24.53573409 0 0 #NAME? 2.39E-08 2.88E-07 Down 3.210081 2.657986 3.927349 0 3.97E-72 6.29E-51 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29827_c1_g3_i1 19.24283885 30.01504661 8.470631085 0.282212825 -1.825144545 0.002982911 0.013587337 Down 3.915572 6.819251 6.339441 2.233298 1.126652 0.5616201 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29827_c1_g5_i2 61.13701638 82.33331242 39.94072034 0.485110087 -1.043615917 0.001257965 0.00639879 Down 13.04918 17.503 18.68798 5.650362 5.529773 8.106299 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29829_c0_g2_i1 8.907881086 16.33799417 1.477768002 0.090449781 -3.466739173 0.001147068 0.005893476 Down 1.526967 1.876869 1.087808 0.08439007 0.1685868 0.09373704 XP_011079196.1 cytosolic sulfotransferase 12-like [Sesamum indicum] Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15 OS=Arabidopsis thaliana OX=3702 GN=SOT15 PE=1 SV=1 -- -- -- -- -- -- KOG1584 Sulfotransferase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111H56 Sulfotransferase Cellular Component: cytoplasm (GO:0005737);|Biological Process: jasmonic acid metabolic process (GO:0009694);|Biological Process: response to jasmonic acid (GO:0009753);|Molecular Function: hydroxyjasmonate sulfotransferase activity (GO:0080131); "PF00685.26,PF13469.5" Sulfotransferase domain|Sulfotransferase family TRINITY_DN29829_c0_g3_i4 35.37685701 23.58214217 47.17157186 2.000309027 1.000222898 0.02117072 0.070948875 Up 2.03447 1.35885 1.050518 2.235278 1.67325 3.378377 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29832_c0_g1_i4 33.64654437 65.07257111 2.220517635 0.034123711 -4.873081623 5.64E-16 1.41E-14 Down 5.212287 6.611531 8.611284 0 0.3531754 0.1816978 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29832_c0_g4_i1 17.12838703 29.81573879 4.441035271 0.148949362 -2.747106151 0.025625179 0.082849271 Down 2.314958 10.49193 4.701284 0 1.310384 0.6857756 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29844_c1_g1_i2 10.21138101 3.755515214 16.6672468 4.438071968 2.149933063 0.016950509 0.058969534 Up 0.8114383 0 0.4706282 0.7263406 2.398589 1.543329 XP_023877167.1 LRR receptor-like serine/threonine-protein kinase EFR [Quercus suber] Q1MX30|XA21_ORYSI Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: positive regulation of defense response (GO:0031349);|Biological Process: protein autophosphorylation (GO:0046777);|Biological Process: positive regulation of defense response to bacterium (GO:1900426); -- -- TRINITY_DN29844_c1_g5_i1 12.77951915 4.227871025 21.33116728 5.045368498 2.334959643 0.004255853 0.018470785 Up 0.4326698 0.4211002 1.684491 3.147424 2.385818 4.650167 PIN15304.1 Leucine-rich repeat protein [Handroanthus impetiginosus] Q1MX30|XA21_ORYSI Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: positive regulation of defense response (GO:0031349);|Biological Process: protein autophosphorylation (GO:0046777);|Biological Process: positive regulation of defense response to bacterium (GO:1900426); -- -- TRINITY_DN29845_c0_g2_i1 16.36548182 30.91978746 1.811176178 0.058576605 -4.09353161 0.000974069 0.005099286 Down 9.610141 7.653877 2.111546 2.02E-26 0.9184743 3.99E-31 PSR85372.1 Chloride channel protein like [Actinidia chinensis var. chinensis] P92943|CLCD_ARATH Chloride channel protein CLC-d OS=Arabidopsis thaliana OX=3702 GN=CLC-D PE=1 SV=2 pop:POPTR_0010s10040g K05016 CLCN7 chloride channel 7 -- -- KOG0474 Cl- channel CLC-7 and related proteins (CLC superfamily) [P] METABOLISM Inorganic ion transport and metabolism P COG0038 chloride channel Molecular Function: voltage-gated chloride channel activity (GO:0005247);|Cellular Component: trans-Golgi network (GO:0005802);|Biological Process: unidimensional cell growth (GO:0009826);|Biological Process: response to metal ion (GO:0010038);|Cellular Component: chloride channel complex (GO:0034707);|Biological Process: regulation of ion transmembrane transport (GO:0034765);|Biological Process: chloride transmembrane transport (GO:1902476); -- -- TRINITY_DN2984_c0_g1_i2 9.329480936 18.65896187 0 0 #NAME? 1.95E-06 1.79E-05 Down 3.207249 3.151366 2.895075 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29850_c0_g2_i1 8.85014533 17.70029066 0 0 #NAME? 4.15E-06 3.59E-05 Down 2.562642 3.38482 2.097807 0 0 0 CAN64089.1 hypothetical protein VITISV_002950 [Vitis vinifera] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29887_c1_g2_i1 62.57494662 119.2936587 5.856234521 0.049090912 -4.348400216 4.92E-25 2.15E-23 Down 6.368944 7.053417 6.022345 0.3454425 0.3727962 0.07567025 XP_020876192.1 uncharacterized protein LOC110227160 [Arabidopsis lyrata subsp. lyrata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29888_c1_g1_i1 26.61979313 7.587485337 45.65210093 6.016762986 2.588987527 0.004933339 0.020964149 Up 0.6779357 1.518264 0.8825609 1.782941 7.202856 5.315544 XP_020549871.1 SNARE-interacting protein KEULE isoform X2 [Sesamum indicum] Q7XWP3|SEC1A_ORYSJ Probable protein transport Sec1a OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0252400 PE=3 SV=2 -- -- -- -- -- -- KOG1300 Vesicle trafficking protein Sec1 [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U COG5158 Vacuolar Protein Biological Process: vesicle docking involved in exocytosis (GO:0006904);|Biological Process: protein transport (GO:0015031); -- -- TRINITY_DN29899_c0_g1_i1 538.654626 767.702428 309.6068239 0.403290146 -1.310109941 1.09E-26 5.22E-25 Down 69.64449 70.94586 69.16173 22.60184 22.3032 23.38953 XP_020082582.1 uncharacterized protein LOC109706190 [Ananas comosus] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN29900_c0_g2_i5 127.8275386 199.6782587 55.97681842 0.280335069 -1.834775863 1.16E-14 2.60E-13 Down 2.902709 3.173473 3.774434 0.802596 0.7785902 0.6584374 PRQ44684.1 putative RNA-directed DNA polymerase [Rosa chinensis] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); "PF00665.25,PF13976.5,PF07727.13" Integrase core domain|GAG-pre-integrase domain|Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN29902_c0_g6_i1 5.546430926 9.935496812 1.15736504 0.116487888 -3.101748138 0.017547268 0.060715233 Down 1.666498 1.281811 2.141073 0 0 0.419012 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29903_c0_g3_i1 16.80691298 25.91267357 7.701152391 0.297196365 -1.750511625 0.019675417 0.066915878 Down 3.238759 3.794442 6.53538 0 2.588759 0.6431329 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29904_c0_g4_i1 109.7220229 192.8544103 26.58963546 0.137874137 -2.858576235 1.40E-20 4.74E-19 Down 8.555875 7.601966 10.62945 1.036847 1.23268 0.6818645 XP_021601663.1 histone acetyltransferase of the MYST family 1-like [Manihot esculenta] Q9FLF7|MYST1_ARATH Histone acetyltransferase of the MYST family 1 OS=Arabidopsis thaliana OX=3702 GN=HAM1 PE=1 SV=1 nnu:104600031 K11308 "MYST1, MOF, KAT8" histone acetyltransferase MYST1 -- -- KOG2747 Histone acetyltransferase (MYST family) [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics B COG5027 histone acetyltransferase "Cellular Component: histone acetyltransferase complex (GO:0000123);|Cellular Component: nuclear chromatin (GO:0000790);|Molecular Function: histone acetyltransferase activity (GO:0004402);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA repair (GO:0006281);|Biological Process: response to UV-B (GO:0010224);|Molecular Function: H4 histone acetyltransferase activity (GO:0010485);|Molecular Function: histone binding (GO:0042393);|Molecular Function: histone acetyltransferase activity (H4-K5 specific) (GO:0043995);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Biological Process: positive regulation of transcription by RNA polymerase II (GO:0045944);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: regulation of photoperiodism, flowering (GO:2000028);" -- -- TRINITY_DN29905_c0_g1_i11 932.4948445 1282.734094 582.2555946 0.45391761 -1.139497635 5.64E-21 1.98E-19 Down 43.01377 50.87883 42.63941 17.05386 15.13988 17.82398 XP_012833801.1 PREDICTED: LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Erythranthe guttata] F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Arabidopsis thaliana OX=3702 GN=BIG1 PE=2 SV=1 sita:101755441 K18442 "ARFGEF, BIG" brefeldin A-inhibited guanine nucleotide-exchange protein ko04144 Endocytosis KOG0929 Guanine nucleotide exchange factor [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " S COG5307 and Sec7 domain Molecular Function: ARF guanyl-nucleotide exchange factor activity (GO:0005086);|Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: cytosol (GO:0005829);|Cellular Component: chloroplast (GO:0009507);|Biological Process: protein transport (GO:0015031);|Cellular Component: membrane (GO:0016020);|Biological Process: vesicle-mediated transport (GO:0016192);|Biological Process: regulation of ARF protein signal transduction (GO:0032012); -- -- TRINITY_DN29916_c0_g2_i1 65.31880993 36.56008433 94.07753553 2.573230813 1.363580869 2.24E-05 0.00016966 Up 6.327928 7.235726 6.600905 14.04313 13.29811 14.6117 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2991_c0_g1_i1 113.6880386 188.0506838 39.32539347 0.209121247 -2.257588447 7.06E-07 6.93E-06 Down 13.09536 9.681241 7.256191 2.40566 1.272367 1.392244 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29923_c1_g1_i1 34.96308999 18.56630517 51.3598748 2.766294873 1.467954949 0.015506456 0.054879506 Up 6.301533 2.871203 2.850142 12.94075 5.136429 8.871451 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29923_c1_g3_i8 151.1369585 233.5636685 68.71024847 0.294182091 -1.765218671 3.26E-12 6.02E-11 Down 7.308146 5.779845 7.985389 1.627954 2.15126 1.215253 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29925_c0_g1_i7 175.87754 319.0448518 32.71022815 0.102525485 -3.285945527 5.26E-47 5.20E-45 Down 3.266699 3.876789 4.064056 0.3452515 0.2725023 0.3157288 XP_011079355.1 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Sesamum indicum] Q9LUM0|FAB1B_ARATH 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=2 SV=1 sind:105162882 K00921 "PIKFYVE, FAB1" 1-phosphatidylinositol-3-phosphate 5-kinase ko00562|ko04070|ko04145 Inositol phosphate metabolism|Phosphatidylinositol signaling system|Phagosome KOG0230 Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms O COG0459 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity) Molecular Function: 1-phosphatidylinositol-3-phosphate 5-kinase activity (GO:0000285);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: endosome (GO:0005768);|Biological Process: vacuole organization (GO:0007033);|Biological Process: pollen development (GO:0009555);|Cellular Component: endosome membrane (GO:0010008);|Biological Process: endomembrane system organization (GO:0010256);|Biological Process: phosphatidylinositol phosphorylation (GO:0046854);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: stomatal closure (GO:0090332); "PF00118.23,PF01504.17,PF01363.20" TCP-1/cpn60 chaperonin family|Phosphatidylinositol-4-phosphate 5-Kinase|FYVE zinc finger TRINITY_DN29925_c0_g3_i1 104.9241856 147.3217729 62.52659835 0.424421979 -1.236428727 0.016236721 0.057023866 Down 33.96767 17.74185 18.43778 10.39043 7.688254 5.835362 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29928_c0_g3_i1 23.76890765 33.5905734 13.9472419 0.415212975 -1.268076569 0.015851553 0.055869986 Down 2.12109 2.841793 2.817838 0.3202079 0.6412615 1.620171 XP_011070203.1 shikimate O-hydroxycinnamoyltransferase [Sesamum indicum] Q8GSM7|HST_TOBAC Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum OX=4097 GN=HST PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YB17 Transferase Family Molecular Function: shikimate O-hydroxycinnamoyltransferase activity (GO:0047172); PF02458.14 Transferase family TRINITY_DN29931_c3_g1_i11 83.74381367 113.195281 54.29234636 0.479634362 -1.059993075 0.003368114 0.015091185 Down 4.92972 2.956797 3.463328 1.612903 1.741342 1.01275 XP_020258776.1 uncharacterized protein LOC109835202 [Asparagus officinalis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF03732.16 Retrotransposon gag protein TRINITY_DN29934_c0_g4_i1 52.37807738 27.14551388 77.61064088 2.859059557 1.515540673 0.006288094 0.025738092 Up 0.154058 6.346416 6.998981 7.348786 10.50014 13.36841 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29935_c0_g5_i1 15.02666642 27.73860276 2.31473008 0.08344797 -3.582979242 0.000137801 0.00088802 Down 5.983975 5.037554 2.030517 3.28E-32 0 0.9604668 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29936_c0_g3_i1 111.5136546 68.14649094 154.8808182 2.272762927 1.184447204 1.65E-06 1.53E-05 Up 10.78886 4.858474 9.06377 14.04016 16.02148 15.25794 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29948_c0_g1_i11 615.7977811 933.4465491 298.1490132 0.319406626 -1.646533852 1.12E-44 1.04E-42 Down 12.77978 14.25695 14.22849 3.379926 3.543159 3.71202 XP_021758664.1 uncharacterized protein LOC110723627 [Chenopodium quinoa] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41103ST NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN29950_c0_g1_i10 406.2196808 196.7337065 615.7056552 3.129639887 1.645996663 1.07E-32 6.62E-31 Up 7.458047 6.600004 6.727118 16.02898 18.42424 18.14159 XP_011090870.1 uncharacterized protein LOC105171448 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29954_c1_g1_i5 558.7279638 806.7607885 310.695139 0.385114328 -1.376641296 4.99E-30 2.79E-28 Down 24.11007 24.6285 23.89599 7.496991 6.947303 8.132572 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29972_c0_g2_i1 11.95825033 20.58290757 3.333593086 0.16195929 -2.626296876 0.002131362 0.01017018 Down 2.746998 2.673435 1.137709 0.4505819 0.2289588 0.2335759 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29972_c0_g3_i2 46.80385722 71.06032069 22.54739375 0.317299353 -1.656083518 2.29E-05 0.000173464 Down 4.333747 4.521224 4.07432 1.244224 1.244147 0.8161601 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29972_c0_g4_i1 38.05622002 58.03209199 18.08034805 0.311557751 -1.682428487 9.96E-05 0.00066101 Down 8.549154 8.588441 9.242271 3.683038 1.867972 1.152761 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29972_c0_g5_i1 14.92581162 25.22216307 4.629460161 0.183547309 -2.445776131 0.001120123 0.005772024 Down 5.754849 4.556358 2.887224 0 0 1.992714 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29974_c1_g2_i1 27.55707997 39.53607616 15.57808377 0.394021999 -1.343651913 0.005723063 0.023781307 Down 3.721752 4.204866 6.778881 1.188752 1.974269 1.535655 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29976_c0_g2_i1 9.647375633 4.013517342 15.28123392 3.807441857 1.928822006 0.030521581 0.095549388 Up 0.3945996 0.5695163 0.6009572 1.194498 1.792743 2.073504 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29976_c0_g3_i1 19.70706159 34.18814669 5.225976495 0.152859309 -2.709723677 2.84E-05 0.000211174 Down 7.804881 7.144596 6.611452 1.316032 0.4482547 0.9705337 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29984_c2_g2_i1 31.64945957 57.34074091 5.958178231 0.103908288 -3.26661736 7.87E-10 1.13E-08 Down 5.633278 4.66339 4.979981 0.2856144 0.4992727 0.5219034 XP_010030178.1 PREDICTED: 60S ribosomal protein L3 [Eucalyptus grandis] P17094|RL31_ARATH 60S ribosomal protein L3-1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=1 SV=5 egr:104420002 K02925 "RP-L3e, RPL3" large subunit ribosomal protein L3e ko03010 Ribosome KOG0746 60S ribosomal protein L3 and related proteins [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0087 "One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity)" Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cell wall (GO:0005618);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: polysomal ribosome (GO:0042788); -- -- TRINITY_DN29984_c2_g3_i1 77.97287559 155.9457512 0 0 #NAME? 1.02E-48 1.07E-46 Down 15.19328 12.63092 12.66444 0 0 3.40E-59 XP_011093526.1 zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Sesamum indicum] Q9LHJ8|SAP5_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana OX=3702 GN=SAP5 PE=2 SV=1 -- -- -- -- -- -- KOG3173 Predicted Zn-finger protein [R] POORLY CHARACTERIZED General function prediction only S ENOG4111UWC zinc finger Molecular Function: DNA binding (GO:0003677);|Molecular Function: ubiquitin-protein transferase activity (GO:0004842);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to osmotic stress (GO:0006970);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: protein autoubiquitination (GO:0051865); -- -- TRINITY_DN29987_c0_g1_i1 274.6529329 450.5192722 98.78659359 0.219272736 -2.189201652 4.43E-37 3.20E-35 Down 8.291826 7.742249 7.203003 1.310173 1.439153 1.362384 XP_021668159.1 uncharacterized protein LOC110655968 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z2X5 "CACTA, En Spm sub-class" -- "PF02992.13,PF13960.5" Transposase family tnp2|Domain of unknown function (DUF4218) TRINITY_DN29989_c0_g1_i4 64.84813907 121.8193468 7.876931384 0.064660759 -3.950965755 6.19E-11 1.01E-09 Down 7.957415 12.73804 7.246531 0.7413932 0.09486981 0.680162 EPS66976.1 "hypothetical protein M569_07800, partial [Genlisea aurea]" Q8GYH8|SUT42_ARATH Probable sulfate transporter 4.2 OS=Arabidopsis thaliana OX=3702 GN=SULTR4;2 PE=2 SV=2 sind:105171921 K18059 SULTR4 sulfate transporter 4 -- -- KOG0236 Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [P] METABOLISM Inorganic ion transport and metabolism P COG0659 sulfate transporter Molecular Function: secondary active sulfate transmembrane transporter activity (GO:0008271);|Molecular Function: sulfate transmembrane transporter activity (GO:0015116);|Molecular Function: symporter activity (GO:0015293);|Molecular Function: anion:anion antiporter activity (GO:0015301);|Cellular Component: integral component of membrane (GO:0016021); PF00916.19 Sulfate permease family TRINITY_DN29997_c0_g1_i1 26.33435524 13.4268095 39.24190098 2.922652695 1.547278401 0.019654542 0.066854897 Up 2.960526 0.7212824 3.553025 3.098969 6.238103 8.158568 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN29999_c1_g1_i1 15.7843056 31.5686112 0 0 #NAME? 1.93E-10 2.98E-09 Down 6.88566 6.595139 5.059993 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN2_c0_g1_i1 7.21920617 14.43841234 0 0 #NAME? 4.33E-05 0.000310257 Down 2.082371 2.358273 1.655124 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30005_c0_g2_i1 244.3760608 326.8346393 161.9174822 0.495411021 -1.013302132 2.99E-09 4.04E-08 Down 21.38756 19.96144 19.62718 8.425043 7.070547 8.838014 CDP06180.1 unnamed protein product [Coffea canephora] Q5ZCI1|MPK10_ORYSJ Mitogen-activated protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=MPK10 PE=2 SV=2 -- -- -- -- -- -- KOG0660 Mitogen-activated protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XNY0 Mitogen-activated protein kinase Molecular Function: MAP kinase activity (GO:0004707);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: regulation of gene expression (GO:0010468);|Biological Process: intracellular signal transduction (GO:0035556); "PF00069.24,PF07714.16,PF06293.13" Protein kinase domain|Protein tyrosine kinase|Lipopolysaccharide kinase (Kdo/WaaP) family TRINITY_DN30011_c0_g1_i1 67.45007513 92.4944426 42.40570766 0.458467628 -1.125108226 0.000333988 0.001973802 Down 6.001897 6.081724 6.70237 1.88375 2.495223 2.576518 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30012_c0_g1_i1 11.31483583 4.366172679 18.26349899 4.182953889 2.064522095 0.018150851 0.062513018 Up 0.9856445 0.4829396 0.7758013 3.944096 0.98929 2.511132 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30020_c0_g1_i22 1449.509964 2898.271904 0.748023582 0.000258093 -11.91982158 0 0 Down 104.028 100.905 99.11025 0 0.03972432 0.04369757 XP_013623507.1 PREDICTED: gibberellin 2-beta-dioxygenase 2 [Brassica oleracea var. oleracea] Q9XG83|G2OX_PHACN Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus OX=3886 GN=GA2OX1 PE=2 SV=1 bna:106375947 K04125 E1.14.11.13 gibberellin 2-oxidase ko00904 Diterpenoid biosynthesis KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: gibberellin biosynthetic process (GO:0009686);|Molecular Function: gibberellin 2-beta-dioxygenase activity (GO:0045543);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN30020_c0_g2_i1 73.74423459 147.12096 0.367509184 0.002498007 -8.645006779 1.57E-44 1.45E-42 Down 10.15212 13.46866 11.32823 0.08157323 0 2.92E-26 PIN04676.1 Iron/ascorbate family oxidoreductase [Handroanthus impetiginosus] Q9XG83|G2OX_PHACN Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus OX=3886 GN=GA2OX1 PE=2 SV=1 gra:105778651 K04125 E1.14.11.13 gibberellin 2-oxidase ko00904 Diterpenoid biosynthesis KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: gibberellin biosynthetic process (GO:0009686);|Molecular Function: gibberellin 2-beta-dioxygenase activity (GO:0045543);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN30021_c0_g2_i1 19.92251072 35.38289037 4.462131066 0.126109852 -2.987247109 0.010524754 0.039694229 Down 10.17133 2.192308 5.398234 0.6441857 0.6452285 0.6398139 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30024_c0_g1_i17 456.2147293 675.2916394 237.1378191 0.351163564 -1.509784932 2.13E-30 1.21E-28 Down 10.47595 10.87663 11.12466 3.001538 2.802267 3.401872 EYU34586.1 hypothetical protein MIMGU_mgv1a001653mg [Erythranthe guttata] Q9FMB4|AUG5_ARATH AUGMIN subunit 5 OS=Arabidopsis thaliana OX=3702 GN=AUG5 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XRWJ NA Cellular Component: spindle microtubule (GO:0005876);|Cellular Component: phragmoplast (GO:0009524);|Molecular Function: microtubule minus-end binding (GO:0051011);|Biological Process: spindle assembly (GO:0051225);|Biological Process: cell division (GO:0051301);|Cellular Component: HAUS complex (GO:0070652); -- -- TRINITY_DN30026_c0_g1_i1 50.40582147 74.50795011 26.30369282 0.353032029 -1.502129015 5.43E-05 0.000381969 Down 4.525913 5.904042 5.089687 2.131129 1.161665 1.134894 XP_012849677.1 PREDICTED: DNA topoisomerase 2 [Erythranthe guttata] P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana OX=3702 GN=TOP2 PE=2 SV=2 -- -- -- -- -- -- KOG0355 DNA topoisomerase type II [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics L COG0188 "DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings (By similarity)" Biological Process: resolution of meiotic recombination intermediates (GO:0000712);|Biological Process: sister chromatid segregation (GO:0000819);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA topoisomerase activity (GO:0003916);|Molecular Function: DNA topoisomerase type II (ATP-hydrolyzing) activity (GO:0003918);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA topological change (GO:0006265);|Biological Process: mitotic DNA integrity checkpoint (GO:0044774);|Molecular Function: metal ion binding (GO:0046872); PF00521.19 "DNA gyrase/topoisomerase IV, subunit A" TRINITY_DN30037_c0_g3_i1 11.15263587 4.879094151 17.42617759 3.571601009 1.836570923 0.030487419 0.095459986 Up 0.7573223 0.3750411 1.795868 3.265217 2.911695 2.586905 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30039_c1_g2_i1 15.84425407 25.37582593 6.312682202 0.248767556 -2.007129751 0.003084783 0.013998555 Down 2.562314 1.187234 3.119954 0.5678979 0.4319822 0.4277541 XP_020423840.1 uncharacterized protein LOC109950206 [Prunus persica] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" -- -- TRINITY_DN30039_c2_g1_i1 11.86185599 2.366174951 21.35753703 9.026186764 3.17411663 0.000302752 0.001806363 Up 0.9364809 6.19E-46 0.3592428 3.635392 1.367355 4.181283 XP_017256423.1 PREDICTED: uncharacterized protein LOC108225982 [Daucus carota subsp. sativus] P31843|RRPO_OENBE RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: RNA-directed 5'-3' RNA polymerase activity (GO:0003968);|Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN30043_c0_g1_i1 447.6605751 600.2170135 295.1041366 0.491662399 -1.02426007 5.89E-15 1.36E-13 Down 11.03027 13.14627 11.88656 4.595835 5.360722 4.358402 PIN17745.1 Tripeptidyl-peptidase II [Handroanthus impetiginosus] Q9SUN6|SBT22_ARATH Subtilisin-like protease SBT2.2 OS=Arabidopsis thaliana OX=3702 GN=SBT2.2 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576); "PF00082.21,PF05922.15" Subtilase family|Peptidase inhibitor I9 TRINITY_DN30048_c2_g1_i1 371.7830389 614.124902 129.4411759 0.210773371 -2.246235485 2.50E-44 2.30E-42 Down 23.03579 28.10496 27.80864 4.511377 4.19935 4.768408 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30048_c2_g2_i1 69.64541741 101.1372489 38.15358595 0.377245638 -1.406423877 0.000147779 0.000946407 Down 15.69966 10.23078 13.71749 1.995292 6.133398 3.904736 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30048_c2_g5_i1 64.8532708 91.11934244 38.58719915 0.423479781 -1.239635006 9.41E-05 0.000627059 Down 13.29243 11.68858 17.72853 4.821594 5.164339 4.523132 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30048_c2_g6_i1 150.8771269 74.23714432 227.5171095 3.064734124 1.615761921 2.95E-08 3.51E-07 Up 11.73435 12.12653 16.34167 33.00033 39.78084 26.48664 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30050_c0_g1_i1 14.4682391 21.18540296 7.751075246 0.365868672 -1.450602207 0.038720459 0.115550444 Down 2.36054 2.375559 2.948736 0.5766425 1.134361 0.5917239 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30058_c1_g2_i1 116.3429454 206.8890571 25.79683362 0.124689213 -3.003591438 4.63E-06 3.98E-05 Down 41.25143 63.11893 29.49514 8.522354 0.000252569 4.894642 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30058_c1_g3_i1 365.8362371 583.3331154 148.3393589 0.254296139 -1.975418539 3.47E-40 2.80E-38 Down 108.7258 103.6266 102.8958 24.22276 16.09616 24.38996 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30058_c2_g1_i1 39.08836204 64.22139159 13.95533249 0.217300375 -2.20223743 4.03E-07 4.10E-06 Down 8.375766 5.994538 7.747627 1.082149 0.534643 2.308256 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30058_c2_g2_i1 3.840387615 0 7.680775229 Inf Inf 0.023153077 0.076262837 Up 6.34E-30 2.47E-46 1.26E-24 2.203452 1.078259 3.21E-05 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30058_c2_g4_i1 23.59513464 42.78015906 4.410110212 0.103087747 -3.278055231 0.010246212 0.038846264 Down 2.331975 13.37684 8.04203 2.032568 1.62E-37 1.64E-07 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30062_c0_g1_i4 168.4156711 231.5940958 105.2372464 0.45440384 -1.137953068 4.10E-06 3.55E-05 Down 12.92713 19.20196 15.85938 6.861223 5.758298 4.916565 XP_011097705.1 probable amino acid permease 7 [Sesamum indicum] Q9FF99|AAP7_ARATH Probable amino acid permease 7 OS=Arabidopsis thaliana OX=3702 GN=AAP7 PE=2 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: amino acid transport (GO:0006865);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Molecular Function: symporter activity (GO:0015293);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN30062_c0_g3_i1 422.3193418 607.5856071 237.0530766 0.390155846 -1.357877578 5.72E-22 2.12E-20 Down 21.39449 20.62655 17.45971 5.369627 6.367494 6.993153 XP_011097705.1 probable amino acid permease 7 [Sesamum indicum] Q9FF99|AAP7_ARATH Probable amino acid permease 7 OS=Arabidopsis thaliana OX=3702 GN=AAP7 PE=2 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: amino acid transport (GO:0006865);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Molecular Function: symporter activity (GO:0015293);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN30077_c0_g2_i1 118.1124633 176.1977759 60.02715071 0.340680525 -1.553508619 1.99E-10 3.08E-09 Down 16.80062 22.08269 21.29047 6.323566 5.59748 4.62815 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30092_c0_g1_i6 381.4706866 509.8254696 253.1159037 0.496475596 -1.010205291 3.42E-07 3.52E-06 Down 40.18424 29.692 30.99883 13.03253 13.46452 13.97738 PIN14335.1 "Mitochondrial processing peptidase, alpha subunit [Handroanthus impetiginosus]" P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum OX=4113 GN=MPP PE=1 SV=1 sind:105173570 K01412 "PMPCA, MAS2" mitochondrial-processing peptidase subunit alpha -- -- KOG2067 "Mitochondrial processing peptidase, alpha subunit" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0612 peptidase' Molecular Function: metalloendopeptidase activity (GO:0004222);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Molecular Function: ubiquinol-cytochrome-c reductase activity (GO:0008121);|Molecular Function: metal ion binding (GO:0046872);|Cellular Component: respiratory chain (GO:0070469); -- -- TRINITY_DN30095_c0_g1_i1 19.50559363 36.76711652 2.244070747 0.061034722 -4.034225973 3.60E-08 4.23E-07 Down 5.950131 5.986927 6.187768 1.07E-40 0.394904 0.391604 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30095_c1_g1_i1 9.399192313 18.79838463 0 0 #NAME? 1.69E-06 1.56E-05 Down 3.455078 4.298827 3.859708 0 2.02E-64 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30095_c3_g2_i2 19.50334404 6.672059689 32.33462838 4.846273848 2.276875929 0.000316185 0.001877135 Up 0.3070371 0.8883688 1.12362 2.669282 3.212552 3.179945 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30095_c4_g1_i1 15.93923529 29.60029883 2.278171756 0.076964485 -3.699663317 3.07E-06 2.73E-05 Down 2.775969 2.744675 1.565898 0.1434566 0 0.2951076 KZV40879.1 hypothetical protein F511_05124 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30100_c0_g2_i2 25.23184661 36.35037223 14.11332099 0.388257949 -1.364912631 0.0106815 0.040151153 Down 2.789167 3.870992 2.293758 0.6084358 1.224445 1.020074 PWA89821.1 protein kinase superfamily protein [Artemisia annua] Q94BU1|Y1181_ARATH "Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g71810 PE=1 SV=1" pda:103717761 K08869 "ADCK, ABC1" aarF domain-containing kinase -- -- KOG1235 Predicted unusual protein kinase [R] POORLY CHARACTERIZED General function prediction only S COG0661 "Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)" Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastoglobule (GO:0010287); -- -- TRINITY_DN30102_c0_g3_i1 75.29230095 142.1427979 8.441804025 0.059389601 -4.073645854 3.17E-22 1.18E-20 Down 18.60827 13.58987 12.94476 1.149069 0.8704606 0.220935 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30102_c0_g4_i2 22.52509582 45.05019165 0 0 #NAME? 7.36E-15 1.69E-13 Down 2.500871 2.817411 3.837467 4.26E-88 3.68E-62 6.92E-76 XP_021989974.1 "glyoxylate/succinic semialdehyde reductase 2, chloroplastic isoform X1 [Helianthus annuus]" F4I907|GLYR2_ARATH "Glyoxylate/succinic semialdehyde reductase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLYR2 PE=1 SV=1" zma:103651518 K18121 GLYR glyoxylate/succinic semialdehyde reductase ko00650|ko00630 Butanoate metabolism|Glyoxylate and dicarboxylate metabolism KOG0409 Predicted dehydrogenase [R] POORLY CHARACTERIZED General function prediction only I COG2084 Dehydrogenase Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Molecular Function: glyoxylate reductase (NADP) activity (GO:0030267);|Molecular Function: NADP binding (GO:0050661);|Molecular Function: NAD binding (GO:0051287); -- -- TRINITY_DN30102_c0_g5_i2 52.77615328 82.20205174 23.35025482 0.28405927 -1.81573611 9.08E-07 8.78E-06 Down 9.175152 11.704 9.870577 2.222776 2.672885 2.182616 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30107_c0_g2_i1 19.83662836 39.67325671 0 0 #NAME? 4.32E-13 8.61E-12 Down 4.863322 4.067853 5.204564 1.35E-82 1.78E-82 4.48E-85 -- -- Q9LUM0|FAB1B_ARATH 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=2 SV=1 cam:101515385 K00921 "PIKFYVE, FAB1" 1-phosphatidylinositol-3-phosphate 5-kinase ko00562|ko04070|ko04145 Inositol phosphate metabolism|Phosphatidylinositol signaling system|Phagosome KOG0230 Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms -- -- -- Molecular Function: 1-phosphatidylinositol-3-phosphate 5-kinase activity (GO:0000285);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: endosome (GO:0005768);|Biological Process: vacuole organization (GO:0007033);|Biological Process: pollen development (GO:0009555);|Cellular Component: endosome membrane (GO:0010008);|Biological Process: endomembrane system organization (GO:0010256);|Biological Process: phosphatidylinositol phosphorylation (GO:0046854);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: stomatal closure (GO:0090332); -- -- TRINITY_DN3010_c0_g1_i2 29.42355087 58.84710174 0 0 #NAME? 5.29E-19 1.62E-17 Down 7.284247 7.54091 6.846404 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30130_c0_g2_i1 14.50342099 21.67283946 7.334002523 0.338396016 -1.563215513 0.025156326 0.081606597 Down 2.441712 1.853756 3.546718 0.8122725 1.081666 0.2838696 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30130_c0_g5_i1 7.484372822 12.40672925 2.562016393 0.20650216 -2.27577122 0.031846609 0.099007816 Down 1.719699 1.632781 1.867689 0.5974433 0.2942253 0 XP_022927450.1 uncharacterized protein LOC111434274 isoform X1 [Cucurbita moschata] -- -- csv:101215136 K13217 "PRPF39, PRP39" pre-mRNA-processing factor 39 -- -- KOG1258 mRNA processing protein [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification A ENOG410XPVR PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae) -- -- -- TRINITY_DN30133_c0_g1_i2 39.12824015 75.33504531 2.921434995 0.038779229 -4.688572059 2.86E-05 0.000212214 Down 10.11279 15.67846 4.599031 0.007517092 0.7765639 0.1093298 XP_011081963.1 pleiotropic drug resistance protein 1 [Sesamum indicum] Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum OX=4097 GN=PDR1 PE=2 SV=1 -- -- -- -- -- -- KOG0065 "Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1131 (ABC) transporter Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887); -- -- TRINITY_DN30133_c0_g2_i3 6289.427252 3874.803119 8704.051385 2.24632094 1.167564065 3.78E-79 7.55E-77 Up 52.07134 55.22613 54.8526 100.2746 97.76848 95.84152 XP_011081963.1 pleiotropic drug resistance protein 1 [Sesamum indicum] Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum OX=4097 GN=PDR1 PE=2 SV=1 -- -- -- -- -- -- KOG0065 "Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1131 (ABC) transporter Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887); "PF01061.23,PF00005.26,PF08370.10,PF13304.5,PF14510.5,PF13555.5" "ABC-2 type transporter|ABC transporter|Plant PDR ABC transporter associated|AAA domain, putative AbiEii toxin, Type IV TA system|ABC-transporter extracellular N-terminal|P-loop containing region of AAA domain" TRINITY_DN30135_c0_g3_i1 29.10526848 18.07491048 40.13562649 2.220515921 1.150894915 0.020031842 0.067899149 Up 1.724858 3.300727 3.637852 5.060428 5.166232 5.306908 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30157_c0_g1_i1 16.91683987 9.341881722 24.49179801 2.621719985 1.390513606 0.020757087 0.069804892 Up 1.376667 0.5728131 0.2237669 1.170339 1.886673 1.546733 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30160_c0_g1_i5 427.9096738 604.6377463 251.1816014 0.415424943 -1.267340253 2.92E-21 1.05E-19 Down 13.61688 14.53846 13.86163 4.84788 3.529548 5.729535 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30161_c2_g1_i6 208.0652893 350.5537003 65.57687818 0.18706657 -2.418376335 4.03E-29 2.20E-27 Down 5.593952 7.260991 5.917174 0.803384 0.9151605 1.11171 XP_022037731.1 uncharacterized protein LOC110940508 [Helianthus annuus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z2X5 "CACTA, En Spm sub-class" -- "PF13960.5,PF13952.5,PF13963.5,PF02992.13" Domain of unknown function (DUF4218)|Domain of unknown function (DUF4216)|Transposase-associated domain|Transposase family tnp2 TRINITY_DN30161_c2_g2_i1 57.62736506 101.1804248 14.07430535 0.13910107 -2.845794578 6.33E-14 1.34E-12 Down 15.17107 19.27169 16.97064 2.058528 2.027321 1.56579 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30165_c0_g2_i2 28.9976651 56.52529346 1.470036737 0.026006707 -5.264972462 1.02E-14 2.32E-13 Down 7.178141 8.050013 9.785771 0.4659655 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30173_c0_g1_i2 35.53639554 52.06690178 19.00588931 0.365028236 -1.45392003 0.000998923 0.005217965 Down 4.348734 2.627185 3.504943 0.9455032 0.9414502 1.210491 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30173_c2_g1_i1 6.402059036 10.61488481 2.18923326 0.206241829 -2.277591131 0.04241286 0.124353891 Down 0.9846351 0.953824 2.551858 0.3459845 0.3443648 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30173_c2_g2_i1 6.613446647 1.302446252 11.92444704 9.155423518 3.194626625 0.005165369 0.021778895 Up 0.4543353 2.90E-69 1.02E-69 1.479687 0.7257329 1.310397 XP_024632745.1 uncharacterized protein LOC112419363 [Medicago truncatula] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN30173_c2_g3_i1 67.5190189 135.0380378 0 0 #NAME? 2.88E-42 2.47E-40 Down 11.75847 12.59045 9.40025 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30173_c2_g4_i1 106.8162789 161.9951903 51.63736754 0.318758646 -1.64946362 2.03E-10 3.14E-09 Down 2.208521 1.764757 1.881284 0.4564122 0.5370322 0.5087533 XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF03078.14 ATHILA ORF-1 family TRINITY_DN30173_c2_g5_i1 81.78174089 144.6335258 18.92995602 0.130882214 -2.93365904 7.65E-20 2.48E-18 Down 3.179778 4.357855 3.425826 0.3332745 0.4485613 0.3769285 XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN30173_c2_g6_i3 37.55229587 17.92084474 57.183747 3.190906893 1.673966513 8.10E-05 0.000548184 Up 1.642908 1.656229 1.316849 3.876467 4.145581 3.878211 XP_022860306.1 uncharacterized protein LOC111380876 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- PF03732.16 Retrotransposon gag protein TRINITY_DN30173_c2_g7_i1 13.44053002 3.441866734 23.43919331 6.810023491 2.767659775 0.000388918 0.002258433 Up 0.2493191 0.475784 0.3630351 1.828336 2.033073 2.223317 XP_024441596.1 uncharacterized protein LOC112324179 [Populus trichocarpa] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN30174_c0_g1_i5 1030.204611 1483.33629 577.0729316 0.389037156 -1.362020145 6.10E-34 3.98E-32 Down 33.26303 36.78655 31.03318 11.39118 10.77221 9.52985 XP_011080242.1 "linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Sesamum indicum]" O24370|LOX21_SOLTU "Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LOX2.1 PE=1 SV=1" sind:105163543 K00454 LOX2S lipoxygenase ko00591|ko00592 Linoleic acid metabolism|alpha-Linolenic acid metabolism -- -- -- -- -- S ENOG410YN4N "Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity)" Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: green leaf volatile biosynthetic process (GO:0010597);|Molecular Function: linoleate 13S-lipoxygenase activity (GO:0016165);|Biological Process: oxylipin biosynthetic process (GO:0031408);|Molecular Function: metal ion binding (GO:0046872); "PF00305.18,PF01477.22" Lipoxygenase|PLAT/LH2 domain TRINITY_DN3017_c0_g1_i1 36.41870301 61.80757518 11.02983084 0.178454353 -2.486373001 8.02E-06 6.60E-05 Down 7.677219 13.82156 15.81239 2.247477 2.268949 0.7955342 XP_018466180.1 PREDICTED: uncharacterized protein LOC108837650 [Raphanus sativus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3018_c0_g1_i1 8.030134881 16.06026976 0 0 #NAME? 1.29E-05 0.000102447 Down 2.096084 2.407234 1.969151 0 0 0 SJX27152.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" P46295|RS14_CHLRE 40S ribosomal protein S14 OS=Chlamydomonas reinhardtii OX=3055 GN=RPS14 PE=3 SV=1 nnu:104587778 K02955 "RP-S14e, RPS14" small subunit ribosomal protein S14e ko03010 Ribosome KOG0407 40S ribosomal protein S14 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0100 "Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF00411.18 Ribosomal protein S11 TRINITY_DN30196_c1_g1_i8 408.936409 603.6433778 214.2294401 0.354894045 -1.494539728 3.53E-27 1.74E-25 Down 37.01907 34.5622 33.39654 9.289151 8.354506 12.46396 KZV40298.1 hypothetical protein F511_18027 [Dorcoceras hygrometricum] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG410ZT99 Pfam:hATC Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); PF14372.5 Domain of unknown function (DUF4413) TRINITY_DN30196_c1_g2_i1 13.84148341 24.35219037 3.330776453 0.136775231 -2.870121107 0.032029987 0.099509767 Down 0.4294569 6.305046 5.20455 0 0.8468108 0.4684055 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30197_c0_g5_i1 76.96587175 151.3697271 2.562016393 0.016925553 -5.884653188 4.05E-08 4.72E-07 Down 5.51351 12.24384 5.658376 0.2197986 0.1101429 0 PKX89132.1 hypothetical protein P174DRAFT_464833 [Aspergillus novofumigatus IBT 16806] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZCN3 NA -- -- -- TRINITY_DN30197_c0_g6_i1 33.44371251 65.40438306 1.483041951 0.022674963 -5.462756008 2.63E-17 7.21E-16 Down 4.771647 5.414195 6.954093 0.1243077 0.05543625 0.06756882 PHT27879.1 hypothetical protein CQW23_32519 [Capsicum baccatum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XZB8 NA -- -- -- TRINITY_DN30199_c0_g1_i6 567.9977985 924.8426772 211.1529199 0.228312258 -2.130919776 5.86E-65 8.89E-63 Down 44.28088 39.62761 39.64441 6.918058 7.851681 8.033013 BAA22288.1 polyprotein [Oryza australiensis] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); "PF00665.25,PF13976.5" Integrase core domain|GAG-pre-integrase domain TRINITY_DN30200_c1_g2_i1 7.667416964 15.33483393 0 0 #NAME? 0.001264823 0.006430074 Down 1.294637 1.280542 4.465595 1.68E-38 0 1.25E-64 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30203_c0_g2_i1 26.60539443 39.55355624 13.65723262 0.345284569 -1.534142234 0.003087638 0.014010111 Down 4.043845 2.503491 3.259701 1.206867 0.9262065 0.5262598 XP_011076071.1 "DExH-box ATP-dependent RNA helicase DExH5, mitochondrial [Sesamum indicum]" F4IM84|DEXH5_ARATH "DExH-box ATP-dependent RNA helicase DExH5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g01130 PE=3 SV=1" sind:105160404 K14442 "DHX36, RHAU" ATP-dependent RNA helicase DHX36 ko03018 RNA degradation KOG0920 ATP-dependent RNA helicase A [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification L COG1643 helicase Molecular Function: RNA binding (GO:0003723);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: mitochondrion (GO:0005739);|Molecular Function: ATP-dependent 3'-5' RNA helicase activity (GO:0034459); -- -- TRINITY_DN30206_c0_g2_i2 12.63781045 24.90811171 0.367509184 0.014754598 -6.08269154 1.67E-07 1.79E-06 Down 3.948985 1.908025 3.168362 0.1349005 3.06E-28 2.79E-37 XP_011083577.1 thaumatin-like protein 1b [Sesamum indicum] Q9FF29|PR5K_ARATH PR5-like receptor kinase OS=Arabidopsis thaliana OX=3702 GN=PR5K PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111GDH thaumatin-like protein Molecular Function: protein kinase activity (GO:0004672);|Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to fungus (GO:0009620);|Cellular Component: integral component of membrane (GO:0016021); PF00314.16 Thaumatin family TRINITY_DN3020_c0_g1_i1 9.59502341 19.19004682 0 0 #NAME? 1.31E-06 1.23E-05 Down 2.973489 3.734232 3.116133 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3020_c1_g1_i1 7.714384458 15.42876892 0 0 #NAME? 2.19E-05 0.000166223 Down 2.481061 2.137797 1.548743 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30222_c0_g2_i1 9.174662629 17.98181607 0.367509184 0.020437824 -5.612614618 1.64E-05 0.000127772 Down 0.7777938 1.929668 2.123168 0.07873691 1.02E-37 7.14E-19 XP_012835585.1 PREDICTED: histidine kinase CKI1-like [Erythranthe guttata] O22267|CKI1_ARATH Histidine kinase CKI1 OS=Arabidopsis thaliana OX=3702 GN=CKI1 PE=1 SV=1 -- -- -- -- -- -- KOG0519 Sensory transduction histidine kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T ENOG410XT1K Histidine kinase Molecular Function: phosphorelay sensor kinase activity (GO:0000155);|Molecular Function: protein histidine kinase activity (GO:0004673);|Cellular Component: intracellular (GO:0005622);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: nucleoside metabolic process (GO:0009116);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: embryo sac development (GO:0009553);|Biological Process: cytokinin-activated signaling pathway (GO:0009736);|Biological Process: phloem or xylem histogenesis (GO:0010087);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: protein homodimerization activity (GO:0042803);|Biological Process: secondary growth (GO:0080117); -- -- TRINITY_DN30223_c0_g4_i1 19.00050134 33.2001895 4.800813191 0.144601982 -2.789840772 0.00049202 0.002786493 Down 5.842861 4.884555 2.033531 0.4453609 0.6234668 0.3179871 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30223_c2_g1_i1 18.36105005 26.01548885 10.70661125 0.411547571 -1.280868892 0.041242705 0.121608381 Down 5.631923 4.345627 4.473503 1.213394 2.48423 1.187972 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30224_c1_g2_i2 43.82594815 18.68868555 68.96321075 3.690104934 1.883661842 3.94E-06 3.42E-05 Up 1.669351 1.040862 2.048297 4.871396 3.720645 5.385812 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30224_c1_g3_i2 119.080312 48.28278399 189.8778401 3.932619961 1.975490775 1.11E-15 2.70E-14 Up 2.257317 2.121705 2.099523 5.84586 6.902286 7.856182 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30224_c2_g1_i1 71.35060501 25.60718717 117.0940228 4.572701488 2.193046741 6.72E-12 1.21E-10 Up 1.890312 3.611607 2.446893 8.90916 10.02284 10.29483 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30224_c2_g2_i1 139.9776437 48.01963292 231.9356544 4.83001723 2.272028336 3.72E-07 3.80E-06 Up 2.198011 15.15952 7.603538 24.03979 40.51797 32.99858 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30227_c0_g1_i5 332.3504459 175.7416567 488.9592351 2.782261442 1.476257992 1.90E-22 7.18E-21 Up 3.158627 3.119963 3.696362 6.86053 7.609889 7.980329 XP_011092104.1 phospholipase D zeta 1 [Sesamum indicum] Q9LRZ5|PLDZ1_ARATH Phospholipase D zeta 1 OS=Arabidopsis thaliana OX=3702 GN=PLDZETA1 PE=1 SV=1 sind:105172403 K01115 PLD1_2 phospholipase D1/2 ko00564|ko04144|ko00565 Glycerophospholipid metabolism|Endocytosis|Ether lipid metabolism KOG1329 Phospholipase D1 [I] METABOLISM Lipid transport and metabolism I COG1502 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity) Molecular Function: phospholipase D activity (GO:0004630);|Biological Process: phosphatidic acid biosynthetic process (GO:0006654);|Biological Process: lipid biosynthetic process (GO:0008610);|Biological Process: lipid catabolic process (GO:0016042);|Cellular Component: cytoplasmic vesicle (GO:0031410);|Biological Process: inositol lipid-mediated signaling (GO:0048017);|Biological Process: root development (GO:0048364);|Molecular Function: N-acylphosphatidylethanolamine-specific phospholipase D activity (GO:0070290); "PF00614.21,PF13091.5" Phospholipase D Active site motif|PLD-like domain TRINITY_DN30235_c1_g2_i5 192.7745468 383.3651344 2.183959311 0.005696813 -7.455629347 9.83E-106 2.67E-103 Down 37.16058 35.6377 30.49951 0.1463217 0.2939704 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30235_c1_g3_i3 21.77177515 43.5435503 0 0 #NAME? 3.81E-14 8.20E-13 Down 8.793473 6.385246 5.48895 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30238_c0_g1_i17 1390.604539 2232.524815 548.684262 0.245768494 -2.024628111 6.61E-52 7.53E-50 Down 44.02988 40.97009 36.32989 7.526806 8.129046 8.416715 KHN28812.1 "Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Glycine soja]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30245_c0_g1_i2 1270.541898 686.4597647 1854.624031 2.701722849 1.433879686 6.72E-59 9.19E-57 Up 11.75064 11.03055 9.786077 22.54356 23.70832 24.76394 XP_011071734.1 zinc finger protein BRUTUS-like At1g18910 isoform X1 [Sesamum indicum] F4HVS0|BTSL2_ARATH Zinc finger protein BRUTUS-like At1g74770 OS=Arabidopsis thaliana OX=3702 GN=At1g74770 PE=2 SV=1 sind:105157125 K16276 "K16276, BTS" zinc finger protein-like protein -- -- KOG1940 Zn-finger protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410XXHF ring finger and CHY zinc finger Cellular Component: nucleus (GO:0005634);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: ligase activity (GO:0016874); "PF14599.5,PF01814.22,PF05495.11,PF13639.5" Zinc-ribbon|Hemerythrin HHE cation binding domain|CHY zinc finger|Ring finger domain TRINITY_DN30247_c1_g4_i1 11.34675525 18.12943573 4.564074776 0.251749412 -1.989939689 0.014804234 0.052822559 Down 3.348654 1.293956 2.194545 0.126803 0.2529676 1.129051 KZV14417.1 putative LRR receptor-like serine/threonine-protein kinase [Dorcoceras hygrometricum] C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 vvi:100241966 K13420 FLS2 LRR receptor-like serine/threonine-protein kinase FLS2 ko04626 Plant-pathogen interaction -- -- -- -- -- S COG4886 leucine Rich Repeat -- -- -- TRINITY_DN30252_c0_g1_i1 438.0934367 640.9721755 235.2146979 0.366965536 -1.446283518 0.001204905 0.006157181 Down 107.3567 58.27807 66.89791 28.27937 18.57827 22.00476 XP_023896396.1 heat shock 70 kDa protein 15-like [Quercus suber] Q9S7C0|HSP7O_ARATH Heat shock 70 kDa protein 14 OS=Arabidopsis thaliana OX=3702 GN=HSP70-14 PE=1 SV=1 -- -- -- -- -- -- KOG0103 "Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0443 Heat shock protein Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to heat (GO:0009408);|Biological Process: response to cadmium ion (GO:0046686); PF00012.19 Hsp70 protein TRINITY_DN30254_c0_g2_i1 29.55675556 45.81887304 13.29463807 0.290156374 -1.785097473 0.000295259 0.001765139 Down 6.627862 6.385401 7.277642 1.057396 2.457808 1.20764 KNA06759.1 hypothetical protein SOVF_178070 [Spinacia oleracea] Q6Q1P4|SMC1_ARATH Structural maintenance of chromosomes protein 1 OS=Arabidopsis thaliana OX=3702 GN=SMC1 PE=2 SV=2 -- -- -- -- -- -- KOG0018 "Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1)" [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D COG1196 Required for chromosome condensation and partitioning (By similarity) Molecular Function: chromatin binding (GO:0003682);|Molecular Function: transporter activity (GO:0005215);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA repair (GO:0006281);|Biological Process: chromosome segregation (GO:0007059);|Biological Process: sister chromatid cohesion (GO:0007062);|Biological Process: mitotic sister chromatid cohesion (GO:0007064);|Cellular Component: cohesin complex (GO:0008278);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: protein heterodimerization activity (GO:0046982);|Biological Process: cell division (GO:0051301);|Biological Process: meiotic cell cycle (GO:0051321); -- -- TRINITY_DN30255_c0_g2_i1 17.93706263 25.81113657 10.06298869 0.389870034 -1.358934823 0.028045086 0.089280496 Down 2.781196 2.276132 3.017079 0 1.363799 1.189109 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3025_c0_g1_i1 4.464768041 0 8.929536081 Inf Inf 0.001155597 0.005928572 Up 0 0 0 1.347707 1.075122 1.186516 ABM87499.1 "poly(A) binding protein, cytoplasmic 1, partial [synthetic construct]" Q0CR95|PABP_ASPTN "Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pab1 PE=3 SV=1" cvr:CHLNCDRAFT_59028 K13126 PABPC polyadenylate-binding protein ko03018|ko03015|ko03013 RNA degradation|mRNA surveillance pathway|RNA transport KOG0123 Polyadenylate-binding protein (RRM superfamily) [AJ] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING "RNA processing and modification |Translation, ribosomal structure and biogenesis " S ENOG410XR5X "poly(A) binding protein, cytoplasmic" Molecular Function: RNA binding (GO:0003723);|Biological Process: mRNA processing (GO:0006397);|Biological Process: mRNA export from nucleus (GO:0006406);|Biological Process: regulation of translation (GO:0006417);|Cellular Component: cytoplasmic stress granule (GO:0010494);|Cellular Component: post-mRNA release spliceosomal complex (GO:0071014); PF00658.17 "Poly-adenylate binding protein, unique domain" TRINITY_DN30271_c5_g2_i1 44.87144024 87.51181494 2.231065533 0.025494449 -5.293673012 4.46E-22 1.65E-20 Down 10.19879 13.40351 11.56973 0.2490806 0.2485402 0.2685193 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30288_c0_g1_i9 174.1335359 260.5755223 87.69154942 0.336530264 -1.571191842 2.40E-08 2.89E-07 Down 14.33643 14.01672 18.40855 2.128222 4.957143 5.676095 XP_018843142.1 PREDICTED: pectin acetylesterase 12-like [Juglans regia] Q66GM8|PAE10_ARATH Pectin acetylesterase 10 OS=Arabidopsis thaliana OX=3702 GN=PAE10 PE=2 SV=1 -- -- -- -- -- -- KOG4287 Pectin acetylesterase and similar proteins [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis S ENOG410XQKD pectinacetylesterase Cellular Component: extracellular region (GO:0005576);|Cellular Component: plant-type cell wall (GO:0009505);|Molecular Function: pectin acetylesterase activity (GO:0052793);|Biological Process: cell wall organization (GO:0071555); -- -- TRINITY_DN30288_c0_g2_i2 54.07692434 80.00926193 28.14458675 0.351766609 -1.507309552 1.75E-05 0.000136014 Down 13.83767 16.12184 18.8613 3.634448 3.209773 7.2013 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30288_c1_g3_i3 197.1360807 101.0282332 293.2439283 2.90259385 1.537342715 1.48E-15 3.55E-14 Up 3.132808 2.306402 3.634186 6.319091 7.941058 7.018102 PIN06262.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9CAL3|CRK2_ARATH Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16,PF01657.16" Protein kinase domain|Protein tyrosine kinase|Salt stress response/antifungal TRINITY_DN30288_c1_g4_i1 26.47489272 41.30551841 11.64426702 0.281905844 -1.82671471 0.00052621 0.002954113 Down 7.090976 9.546203 9.621292 1.945435 4.022865 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30288_c1_g5_i1 22.45358623 12.37236398 32.53480847 2.629635575 1.394862879 0.009998307 0.038033666 Up 2.879496 2.796409 2.25356 5.859361 6.76843 4.222649 PIN06261.1 Serine/threonine protein kinase [Handroanthus impetiginosus] O64781|Y1639_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61390 OS=Arabidopsis thaliana OX=3702 GN=At1g61390 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN30288_c1_g6_i1 11.53471659 19.41016319 3.659269997 0.188523402 -2.407184475 0.003790413 0.016706302 Down 1.772891 4.695025 4.851721 1.137743 0.5690425 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3028_c0_g1_i1 5.711211271 0.492078091 10.93034445 22.21262163 4.473307771 0.03224127 0.100036089 Up 0 0 0.3510291 2.003779 3.018628 0 PIN24634.1 Triglyceride lipase-cholesterol esterase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- E COG2303 oxidoreductase -- -- -- TRINITY_DN30298_c2_g5_i1 8.392276182 3.129777058 13.65477531 4.362858777 2.125273775 0.027864163 0.08880418 Up 0.2449971 0.4706677 0.5664413 2.620056 1.179596 0.7461148 XP_012841431.1 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Erythranthe guttata] Q6JN47|EIX1_SOLLC Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); PF13855.5 Leucine rich repeat TRINITY_DN30303_c1_g1_i1 555.6595127 329.9078597 781.4111656 2.368573959 1.244018721 5.50E-18 1.59E-16 Up 13.67917 16.98951 14.84783 27.07318 26.83876 33.17659 PIN04752.1 Glutathione S-transferase [Handroanthus impetiginosus] Q03662|GSTX1_TOBAC Probable glutathione S-transferase OS=Nicotiana tabacum OX=4097 PE=2 SV=1 sind:105161624 K00799 "GST, gst" glutathione S-transferase ko00480 Glutathione metabolism KOG0406 Glutathione S-transferase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XSIX glutathione Stransferase Molecular Function: glutathione transferase activity (GO:0004364);|Biological Process: auxin-activated signaling pathway (GO:0009734); "PF02798.19,PF13417.5,PF13409.5,PF00043.24,PF13410.5" "Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, C-terminal domain|Glutathione S-transferase, C-terminal domain" TRINITY_DN30303_c2_g5_i1 9.930478701 19.8609574 0 0 #NAME? 0.005730573 0.023810336 Down 1.014047 4.528929 1.025682 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30312_c0_g1_i1 74.89904381 114.07431 35.72377759 0.313162338 -1.675017377 6.87E-08 7.75E-07 Down 9.491416 10.29593 7.760651 3.247369 1.410222 2.259613 XP_011069519.1 LOW QUALITY PROTEIN: LRR receptor-like serine/threonine-protein kinase ERECTA [Sesamum indicum] Q42371|ERECT_ARATH LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana OX=3702 GN=ERECTA PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- -- -- TRINITY_DN30312_c0_g2_i1 265.8607502 379.497083 152.2244173 0.401121442 -1.317889006 3.27E-15 7.68E-14 Down 13.78553 13.99989 12.89435 5.084048 4.484385 3.594608 XP_011069519.1 LOW QUALITY PROTEIN: LRR receptor-like serine/threonine-protein kinase ERECTA [Sesamum indicum] Q42371|ERECT_ARATH LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana OX=3702 GN=ERECTA PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF00069.24,PF07714.16,PF13855.5,PF12799.6" Protein kinase domain|Protein tyrosine kinase|Leucine rich repeat|Leucine Rich repeats (2 copies) TRINITY_DN30313_c0_g1_i8 128.1341752 179.1812812 77.08706913 0.430218316 -1.216859147 1.34E-07 1.46E-06 Down 2.66444 2.450554 2.7384 0.9449753 0.7777616 1.01315 PIN05529.1 "1,3-beta-glucan synthase [Handroanthus impetiginosus]" Q3B724|CALS5_ARATH Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1 sind:105178085 K11000 CALS callose synthase -- -- KOG0916 "1,3-beta-glucan synthase/callose synthase catalytic subunit" [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis S ENOG410XQ8V synthase "Cellular Component: 1,3-beta-D-glucan synthase complex (GO:0000148);|Molecular Function: 1,3-beta-D-glucan synthase activity (GO:0003843);|Biological Process: (1->3)-beta-D-glucan biosynthetic process (GO:0006075);|Biological Process: regulation of cell shape (GO:0008360);|Biological Process: microsporogenesis (GO:0009556);|Biological Process: pollen germination (GO:0009846);|Biological Process: pollen tube growth (GO:0009860);|Biological Process: pollen wall assembly (GO:0010208);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: cell wall organization (GO:0071555);|Biological Process: regulation of pollen tube growth (GO:0080092);" PF02364.14 "1,3-beta-glucan synthase component" TRINITY_DN30315_c0_g2_i1 35.09007382 67.90197588 2.278171756 0.03355089 -4.897505132 1.43E-16 3.70E-15 Down 8.192465 5.989799 7.310794 0.1927071 4.02E-51 0.4110688 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30321_c0_g1_i1 266.2598053 376.2641753 156.2554352 0.415281192 -1.267839561 2.65E-14 5.74E-13 Down 24.63697 27.5867 22.75036 7.788999 8.2073 9.13732 XP_012847180.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 2 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30321_c0_g4_i1 32.77259334 48.48897559 17.05621109 0.351754412 -1.507359576 0.000843792 0.004495044 Down 7.759212 6.176073 11.15981 3.175201 2.00237 1.880584 XP_011082273.1 LRR receptor-like serine/threonine-protein kinase FEI 1 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30323_c1_g4_i1 25.18073768 38.99698632 11.36448903 0.291419674 -1.778829818 0.006049242 0.024924501 Down 4.882829 2.144669 3.574819 0.4366017 0.4338104 1.739908 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30325_c0_g1_i1 72.97423948 28.11590248 117.8325765 4.190958358 2.067280187 4.86E-11 8.02E-10 Up 0.7395835 0.6262793 0.7135756 2.672359 2.030152 2.344416 XP_022889283.1 uncharacterized protein LOC111404753 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30326_c2_g1_i1 18.03419429 32.59629346 3.47209512 0.106518096 -3.230829547 0.006696647 0.027201871 Down 3.524745 3.122319 9.367821 4.88E-11 0.003061009 1.46739 CAN64055.1 hypothetical protein VITISV_044406 [Vitis vinifera] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN30326_c2_g2_i3 36.39568248 48.6431637 24.14820125 0.496435664 -1.010321333 0.021492406 0.07175675 Down 2.465167 3.161898 2.035772 1.151288 0.8895925 1.01127 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30326_c2_g5_i3 13.15536381 19.97449231 6.336235313 0.317216338 -1.656461015 0.024643002 0.080256838 Down 0.815027 1.515117 1.386785 0.4057913 0.2023634 0.3538839 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3032_c0_g1_i1 11.30779349 21.89111651 0.724470471 0.033094268 -4.91727484 6.81E-06 5.68E-05 Down 3.495996 5.04335 2.094309 0 0.2884117 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30334_c0_g1_i2 1045.61708 695.1397922 1396.094367 2.008364912 1.006021425 3.17E-27 1.57E-25 Up 11.72367 12.17738 10.54106 19.35237 18.44865 18.0049 XP_011076506.1 zinc finger protein BRUTUS [Sesamum indicum] Q8LPQ5|BTS_ARATH Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 sind:105160721 K16276 "K16276, BTS" zinc finger protein-like protein -- -- KOG1940 Zn-finger protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410XXHF ring finger and CHY zinc finger Molecular Function: iron ion binding (GO:0005506);|Cellular Component: nucleus (GO:0005634);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: cellular response to iron ion starvation (GO:0010106);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: ligase activity (GO:0016874);|Biological Process: multicellular organismal iron ion homeostasis (GO:0060586);|Molecular Function: ubiquitin protein ligase activity (GO:0061630); "PF01814.22,PF14599.5,PF05495.11,PF13639.5" Hemerythrin HHE cation binding domain|Zinc-ribbon|CHY zinc finger|Ring finger domain TRINITY_DN30335_c0_g2_i4 55.64147824 78.94917608 32.3337804 0.409551841 -1.287882016 0.019738464 0.067085062 Down 14.79289 18.61911 8.353656 4.927284 1.657999 7.086921 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30344_c0_g1_i6 31.68831985 52.07914538 11.29749432 0.216929334 -2.204702943 0.00124173 0.006327555 Down 3.272618 2.586203 5.182156 0.2429172 1.558212 0.1454482 XP_025625304.1 zinc finger MYM-type protein 1-like [Arachis hypogaea] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDI6 hAT dimerisation domain-containing protein -- -- -- TRINITY_DN30344_c0_g2_i7 1249.521277 1834.994093 664.0484605 0.361880435 -1.466414984 1.77E-59 2.47E-57 Down 48.42476 49.54072 52.11667 15.01199 14.84544 13.95347 ALE19960.1 1-deoxy-D-xylulose 5-phosphate synthase [Plectranthus barbatus] Q6YU51|DXS2_ORYSJ "Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190000 PE=2 SV=1" sind:105155662 K01662 dxs 1-deoxy-D-xylulose-5-phosphate synthase ko00730|ko00900 Thiamine metabolism|Terpenoid backbone biosynthesis KOG0523 Transketolase [G] METABOLISM Carbohydrate transport and metabolism H COG1154 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (By similarity) Molecular Function: 1-deoxy-D-xylulose-5-phosphate synthase activity (GO:0008661);|Biological Process: thiamine biosynthetic process (GO:0009228);|Cellular Component: chloroplast (GO:0009507);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: 1-deoxy-D-xylulose 5-phosphate biosynthetic process (GO:0052865); "PF13292.5,PF02779.23,PF02780.19" "1-deoxy-D-xylulose-5-phosphate synthase|Transketolase, pyrimidine binding domain|Transketolase, C-terminal domain" TRINITY_DN30349_c0_g2_i1 15.2061843 24.83470476 5.577663833 0.22459151 -2.154624705 0.002754851 0.012711015 Down 3.912649 7.409068 3.761096 0.8944603 0.9128193 0.9706208 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30351_c0_g3_i1 13.99710275 27.9942055 0 0 #NAME? 2.11E-09 2.90E-08 Down 3.123907 4.957976 4.218339 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30357_c2_g1_i2 11.9176317 19.04218147 4.793081926 0.251708657 -1.990173259 0.033559208 0.103317972 Down 3.986219 2.469758 1.080197 0.7532314 0.4921606 0.2405489 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30357_c3_g2_i4 157.6319169 217.7198365 97.54399738 0.448025311 -1.158347857 3.63E-08 4.26E-07 Down 4.768753 4.06451 4.237333 1.339904 1.589322 1.797935 XP_017233167.1 "PREDICTED: uncharacterized protein LOC108207215, partial [Daucus carota subsp. sativus]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN30357_c3_g3_i1 4.797402279 9.594804558 0 0 #NAME? 0.001267429 0.00644068 Down 0.5952141 2.96516 2.516948 4.60E-51 5.87E-60 7.54E-81 EXC18499.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus notabilis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30357_c3_g5_i2 22.45374497 39.64777174 5.259718187 0.13266113 -2.914182379 1.72E-06 1.59E-05 Down 2.739078 1.850315 2.794218 0 0.299273 0.4922112 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30359_c0_g1_i22 341.5525467 495.8705196 187.2345738 0.377587629 -1.405116597 4.44E-21 1.58E-19 Down 21.43823 23.05237 22.77665 6.005036 8.065113 6.402876 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30365_c1_g1_i9 112.2605722 161.7284491 62.79269521 0.388260047 -1.364904838 0.002752515 0.012704108 Down 7.023799 14.68226 9.813245 3.062151 3.484037 3.414675 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30365_c2_g1_i7 45.05357383 64.8818979 25.22524976 0.388787174 -1.362947468 0.000506004 0.002854005 Down 6.181619 5.114266 5.083597 0.5410786 1.521571 3.100155 XP_011096711.1 probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGQX Leucine-rich repeat family protein -- -- -- TRINITY_DN30365_c2_g2_i1 26.81092286 50.71341594 2.908429782 0.057350303 -4.124055076 1.24E-06 1.17E-05 Down 3.835927 8.179865 4.560309 0.1773823 0.5366009 3.42E-06 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30365_c2_g3_i4 128.8151456 204.053434 53.57685717 0.262562879 -1.92926513 8.12E-16 2.00E-14 Down 5.231936 5.707299 5.470959 1.066372 1.150717 1.262785 PIN04048.1 "Multidrug/pheromone exporter, ABC superfamily [Handroanthus impetiginosus]" Q9M0M2|AB9B_ARATH ABC transporter B family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCB9 PE=3 SV=2 sind:105175657 K05658 ABCB1 "ATP-binding cassette, subfamily B (MDR/TAP), member 1" ko02010 ABC transporters KOG0055 "Multidrug/pheromone exporter, ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1132 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);" "PF00664.22,PF00005.26" ABC transporter transmembrane region|ABC transporter TRINITY_DN3036_c0_g1_i1 18.74457711 37.48915422 0 0 #NAME? 0.001547053 0.00768162 Down 5.320299 7.189875 0 0 0 0 KHN18486.1 Snakin-2 [Glycine soja] P46687|GASA3_ARATH Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YXYH Gibberellin regulated protein Cellular Component: extracellular region (GO:0005576);|Biological Process: response to gibberellin (GO:0009739);|Biological Process: gibberellic acid mediated signaling pathway (GO:0009740); PF02704.13 Gibberellin regulated protein TRINITY_DN30370_c0_g2_i1 11.64002695 23.28005389 0 0 #NAME? 6.27E-08 7.12E-07 Down 3.416793 1.95749 3.301395 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30372_c0_g1_i1 14.96993269 24.43531819 5.504547183 0.225270125 -2.150272097 0.002777866 0.012801591 Down 2.263905 1.819087 2.398569 0.7237662 0.3634687 0.1255816 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30372_c2_g1_i11 622.4637932 1069.053924 175.8736627 0.164513369 -2.603723266 1.19E-28 6.31E-27 Down 65.42099 72.96228 53.21959 8.362001 8.157708 8.908075 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30372_c3_g1_i1 3.082669305 6.165338611 0 0 #NAME? 0.018412725 0.063299667 Down 1.797949 1.480536 0.472335 5.38E-31 0 0 XP_022889504.1 uncharacterized protein LOC111405046 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN30372_c4_g1_i1 11.3864906 1.230195228 21.54278597 17.51168065 4.130245645 0.017273782 0.059901357 Up 4.00E-26 9.10E-32 0.6548557 1.625397 2.060673 6.725539 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30375_c0_g1_i1 7.247244736 12.95133609 1.543153387 0.119150131 -3.069147561 0.006294527 0.025757458 Down 2.020769 2.252254 2.378612 0 0 0.6064072 PIN26992.1 Histone-lysine N-methyltransferase [Handroanthus impetiginosus] -- -- sind:105168910 K17398 DNMT3A DNA (cytosine-5)-methyltransferase 3A ko00270 Cysteine and methionine metabolism -- -- -- -- -- S ENOG410YF1Z PWWP domaincontaining protein -- -- -- TRINITY_DN30380_c0_g3_i1 15.14716051 7.075684965 23.21863606 3.281468321 1.714341505 0.049858831 0.141417266 Up 0 1.631299 0.9590342 3.015796 0.8714017 3.097072 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30382_c0_g2_i1 9.679036076 19.35807215 0 0 #NAME? 1.12E-06 1.07E-05 Down 3.108786 2.345049 3.002842 0 1.25E-37 0 XP_022852821.1 uncharacterized protein LOC111374387 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30382_c0_g5_i1 55.93689792 111.8737958 0 0 #NAME? 1.83E-35 1.24E-33 Down 23.95538 19.68441 23.51228 9.80E-71 4.16E-61 6.74E-39 PHT38092.1 "putative envelope ADP,ATP carrier protein, chloroplastic [Capsicum baccatum]" Q9M024|TAAC_ARATH "Thylakoid ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TAAC PE=1 SV=1" sly:101254827 K14684 SLC25A23S "solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41" -- -- KOG0752 Mitochondrial solute carrier protein [C] METABOLISM Energy production and conversion S ENOG410ZRF1 Solute carrier family 25 Molecular Function: ATP transmembrane transporter activity (GO:0005347);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: plastid envelope (GO:0009526);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: plastid (GO:0009536);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: photoprotection (GO:0010117);|Biological Process: photosystem II repair (GO:0010206);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: thylakoid membrane (GO:0042651); -- -- TRINITY_DN30387_c2_g2_i1 3.239493545 6.478987091 0 0 #NAME? 0.034989401 0.106796459 Down 2.675093 0.6375767 0.5264236 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30388_c0_g1_i1 67.02529428 106.272663 27.77792556 0.261383547 -1.935759765 0.003538492 0.015736425 Down 28.22965 17.97139 11.62776 2.156677 6.103669 4.004859 XP_015070384.1 PREDICTED: ABC transporter G family member 11-like [Solanum pennellii] Q8RXN0|AB11G_ARATH ABC transporter G family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCG11 PE=1 SV=1 -- -- -- -- -- -- KOG0061 "Transporter, ABC superfamily (Breast cancer resistance protein)" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1131 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Cellular Component: external side of plasma membrane (GO:0009897);|Biological Process: stem vascular tissue pattern formation (GO:0010222);|Biological Process: cotyledon vascular tissue pattern formation (GO:0010588);|Molecular Function: fatty acid transmembrane transporter activity (GO:0015245);|Biological Process: fatty acid transport (GO:0015908);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Molecular Function: protein homodimerization activity (GO:0042803);|Biological Process: transmembrane transport (GO:0055085);|Biological Process: cutin transport (GO:0080051);" -- -- TRINITY_DN30388_c1_g2_i1 24.05715296 33.58636952 14.52793639 0.432554533 -1.209046066 0.023219397 0.076432057 Down 3.675014 2.296004 3.197805 0.7191523 1.201011 1.261302 XP_012855653.1 PREDICTED: putative late blight resistance protein homolog R1A-10 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30390_c0_g1_i1 157.5079079 221.0324927 93.98332308 0.42520139 -1.233781783 3.79E-09 5.05E-08 Down 12.91383 15.91987 15.66515 5.116854 5.092752 5.06696 PIM99039.1 hypothetical protein CDL12_28470 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30390_c0_g3_i2 18.96295065 37.9259013 0 0 #NAME? 2.12E-12 3.97E-11 Down 3.090985 3.557502 2.219113 0 0 0 XP_012827969.1 PREDICTED: uncharacterized protein LOC105949220 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30401_c0_g1_i1 236.7892513 343.8331049 129.7453977 0.377349929 -1.406025093 1.73E-15 4.14E-14 Down 60.52476 65.59232 55.19199 16.69239 18.93713 19.42258 XP_012844328.1 PREDICTED: cytochrome P450 CYP72A219-like [Erythranthe guttata] H2DH21|C7A29_PANGI Cytochrome P450 CYP72A219 OS=Panax ginseng OX=4054 PE=2 SV=1 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN30411_c0_g2_i1 22.36148113 39.92742301 4.795539242 0.120106405 -3.057615005 0.000843978 0.004495502 Down 3.309436 7.075324 2.821969 0.3238676 0.6477045 0.323322 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3041_c0_g2_i1 18.76898427 35.65085907 1.88710946 0.052933071 -4.239686829 2.68E-08 3.20E-07 Down 1.59759 1.530177 1.575943 0.05459207 0.05454138 0.1193655 XP_012857542.1 PREDICTED: uncharacterized protein LOC105976830 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30420_c0_g4_i3 35.16517887 65.82885172 4.501506024 0.068381962 -3.870240377 2.32E-13 4.74E-12 Down 7.085478 9.504767 11.44765 0.9096294 1.94E-37 0.7171256 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30420_c0_g5_i2 18.69737256 30.06601655 7.328728574 0.243754558 -2.036498899 0.006513765 0.026546896 Down 2.101225 6.158551 4.68172 0.8404512 1.360404 0.3367361 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30422_c0_g1_i2 22.42343148 9.482863281 35.36399967 3.729253351 1.898886812 0.00060839 0.003357647 Up 3.385452 0.5754564 0.9060105 6.305918 3.254778 4.966712 PIN02194.1 Leucine-rich repeat protein [Handroanthus impetiginosus] Q9M0G7|MIK1_ARATH MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- PF13855.5 Leucine rich repeat TRINITY_DN30425_c0_g1_i1 48.76604891 19.212449 78.31964882 4.076505229 2.027332865 1.56E-07 1.68E-06 Up 3.559702 2.496066 3.801652 8.388217 10.45957 13.41217 PIM97154.1 hypothetical protein CDL12_30378 [Handroanthus impetiginosus] Q84WU9|C3H64_ARATH Zinc finger CCCH domain-containing protein 64 OS=Arabidopsis thaliana OX=3702 GN=At5g56900 PE=2 SV=1 -- -- -- -- -- -- KOG2476 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG410XNRG "CWF19-like 1, cell cycle control (S. pombe)" Molecular Function: DNA binding (GO:0003677);|Cellular Component: cytosol (GO:0005829);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN30425_c1_g2_i1 40.47086656 65.2377932 15.70393991 0.240718442 -2.054581423 0.009955423 0.037922744 Down 11.48899 8.361602 3.370957 1.778107 0.8667751 1.921959 XP_009118133.1 PREDICTED: uncharacterized protein LOC103843180 [Brassica rapa] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN30426_c1_g3_i2 8.41947628 16.83895256 0 0 #NAME? 7.14E-06 5.93E-05 Down 2.791815 2.365321 2.58247 2.93E-11 9.50E-13 2.30E-32 PIN19427.1 Arylacetamide deacetylase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30426_c1_g5_i1 9.662755183 16.0390235 3.286486864 0.20490567 -2.286968186 0.036538587 0.110462611 Down 3.17051 0.5939782 3.397842 0.6674984 0.4538665 4.48E-18 PIN19427.1 Arylacetamide deacetylase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30431_c2_g1_i1 46.34327504 88.20332321 4.483226862 0.050828321 -4.298223603 1.15E-17 3.23E-16 Down 16.74493 18.18065 11.25399 1.211287 0 0.6283572 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30431_c5_g1_i1 164.5744094 63.29524633 265.8535725 4.200213885 2.070462795 6.61E-15 1.52E-13 Up 9.902175 8.286875 5.466938 21.32426 27.88754 31.13269 RLW44109.1 hypothetical protein CFP56_030138 [Quercus suber] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN30431_c5_g6_i1 203.92659 122.6629243 285.1902558 2.324991496 1.217225439 0.000346134 0.002037614 Up 9.376704 17.72468 8.051523 27.26801 19.63277 18.95958 XP_012841431.1 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Erythranthe guttata] Q6JN46|EIX2_SOLLC Receptor-like protein EIX2 OS=Solanum lycopersicum OX=4081 GN=EIX2 PE=1 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF13855.5,PF12799.6,PF00560.32,PF13516.5" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine Rich repeat TRINITY_DN30432_c0_g1_i1 82.31557967 117.652079 46.97908032 0.399305144 -1.324436439 5.53E-06 4.69E-05 Down 23.05094 27.20724 22.96949 7.722338 9.587504 6.360827 PIN02839.1 Inositol polyphosphate 5-phosphatase [Handroanthus impetiginosus] Q8H0Z6|IP5P3_ARATH Type IV inositol polyphosphate 5-phosphatase 3 OS=Arabidopsis thaliana OX=3702 GN=IP5P3 PE=1 SV=1 -- -- -- -- -- -- KOG0565 Inositol polyphosphate 5-phosphatase and related proteins [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " T COG5411 inositol "Molecular Function: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity (GO:0004439);|Molecular Function: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (GO:0034485);|Biological Process: phosphatidylinositol dephosphorylation (GO:0046856);" -- -- TRINITY_DN30441_c0_g2_i1 12.44919324 22.65431574 2.244070747 0.099057097 -3.335595851 0.000111436 0.000731834 Down 2.042257 1.793282 2.379419 0 0.222639 0.2287642 XP_011100414.1 epidermal growth factor receptor substrate 15 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG0998 Synaptic vesicle protein EHS-1 and related EH domain proteins [TU] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Signal transduction mechanisms |Intracellular trafficking, secretion, and vesicular transport " -- -- -- -- -- -- TRINITY_DN30443_c2_g1_i1 945.0935034 430.8008741 1459.386133 3.387611819 1.760268568 3.55E-69 5.88E-67 Up 13.95229 16.24092 15.80197 41.02832 43.78437 40.89656 PIN01423.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9LPZ9|SD113_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana OX=3702 GN=SD113 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- T ENOG4110XTI serine threonine-protein kinase -- "PF01453.23,PF00954.19,PF08276.10,PF07714.16,PF00069.24" D-mannose binding lectin|S-locus glycoprotein domain|PAN-like domain|Protein tyrosine kinase|Protein kinase domain TRINITY_DN30453_c2_g1_i1 328.27523 656.55046 0 0 #NAME? 1.26E-190 8.68E-188 Down 31.4462 31.10139 32.74439 2.11E-23 2.47E-28 5.00E-28 XP_011073037.1 uncharacterized protein LOC105158097 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30453_c2_g4_i1 269.0930932 538.1861865 0 0 #NAME? 8.11E-159 4.18E-156 Down 17.54737 16.28461 17.86306 1.02E-55 5.96E-53 6.78E-56 KZV22124.1 hypothetical protein F511_11652 [Dorcoceras hygrometricum] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YB3X Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN30453_c2_g6_i1 12.63714096 0 25.27428192 Inf Inf 2.40E-09 3.27E-08 Up 0 0 0 3.376735 2.286571 2.698551 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30457_c2_g3_i6 68.53569154 112.1568791 24.914504 0.222139776 -2.170460352 0.009981253 0.037981307 Down 11.13147 8.055537 3.008674 1.398506 1.199045 1.378355 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30459_c0_g1_i5 169.1321819 245.6913254 92.57303846 0.376785946 -1.408182941 1.56E-09 2.18E-08 Down 2.654361 3.148804 3.780912 0.8106165 1.053379 1.046212 CAN74303.1 hypothetical protein VITISV_032980 [Vitis vinifera] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); "PF07727.13,PF00665.25,PF14223.5,PF13976.5" Reverse transcriptase (RNA-dependent DNA polymerase)|Integrase core domain|gag-polypeptide of LTR copia-type|GAG-pre-integrase domain TRINITY_DN30460_c0_g2_i1 13.45611498 20.29742397 6.614806001 0.325893868 -1.617525889 0.03190516 0.09917626 Down 1.642172 3.156956 1.735663 0.8732585 0.6795654 0.1731176 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30462_c0_g2_i1 2.204875448 0 4.409750895 Inf Inf 0.04202512 0.123433548 Up 0 0 0 0.4759349 1.225872 0.3268696 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30462_c3_g1_i1 12.48156981 0.492078091 24.47106153 49.73003669 5.63604559 1.79E-07 1.91E-06 Up 0 0 0.1164765 1.914985 2.122459 1.803246 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30462_c5_g2_i5 637.2080392 1061.322462 213.0936168 0.200781218 -2.316303774 8.93E-82 1.86E-79 Down 27.87001 25.27842 25.70944 3.960915 4.627218 4.192055 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30465_c0_g3_i1 9.245631543 18.10547474 0.385788347 0.021307828 -5.55247263 1.98E-05 0.000152173 Down 2.092656 2.549715 1.540691 4.26E-58 6.40E-88 0.1546179 XP_015970167.1 uncharacterized protein LOC107493611 [Arachis duranensis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN30466_c0_g1_i3 16.15749833 26.41447254 5.900524111 0.223382242 -2.16241359 0.001805419 0.008796111 Down 4.544327 4.028893 4.328182 0.3543847 1.422148 0.6927545 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30473_c1_g2_i1 38.23730792 53.23721195 23.23740389 0.436487995 -1.195986121 0.005341312 0.022424915 Down 8.748054 9.855465 7.84225 1.741853 5.154845 2.29247 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30478_c0_g1_i1 21.70440764 38.67866143 4.730153857 0.122293629 -3.031578852 1.91E-06 1.75E-05 Down 6.846782 8.871312 7.273675 0.6403815 1.620831 2.33E-12 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30478_c1_g1_i24 229.1265457 382.9459568 75.30713462 0.196652121 -2.346282349 1.81E-29 9.96E-28 Down 12.25189 14.55803 15.54946 2.608776 2.628332 1.460422 KZV32383.1 CUGBP Elav-like family member 5-like [Dorcoceras hygrometricum] Q8LFS6|BRN1L_ARATH RNA-binding protein BRN1 OS=Arabidopsis thaliana OX=3702 GN=BRN1 PE=2 SV=1 obr:102706752 K13207 "CUGBP, BRUNOL, CELF" CUG-BP- and ETR3-like factor -- -- KOG0144 RNA-binding protein CUGBP1/BRUNO (RRM superfamily) [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification S ENOG4112AGA Rna-binding protein "Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA binding (GO:0003729);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: mRNA catabolic process (GO:0006402);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: flower development (GO:0009908);|Biological Process: positive regulation of salicylic acid mediated signaling pathway (GO:0080151);|Cellular Component: ribonucleoprotein complex (GO:1990904);|Biological Process: regulation of photoperiodism, flowering (GO:2000028);" -- -- TRINITY_DN30484_c1_g3_i1 13.80359896 6.081124504 21.52607342 3.539817908 1.823675149 0.011809207 0.043736113 Up 0.7817493 0.2519897 0.5734703 1.644612 1.388072 1.342011 XP_011085923.1 DNA-directed RNA polymerase III subunit 2 [Sesamum indicum] F4KD38|NRPC2_ARATH DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana OX=3702 GN=NRPC2 PE=2 SV=1 sind:105167808 K03021 "RPC2, POLR3B" DNA-directed RNA polymerase III subunit RPC2 ko00230|ko00240|ko03020 Purine metabolism|Pyrimidine metabolism|RNA polymerase KOG0215 "RNA polymerase III, second largest subunit" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG0085 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity) Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-directed 5'-3' RNA polymerase activity (GO:0003899);|Cellular Component: RNA polymerase III complex (GO:0005666);|Biological Process: transcription by RNA polymerase III (GO:0006383);|Biological Process: megagametogenesis (GO:0009561);|Molecular Function: ribonucleoside binding (GO:0032549);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN30484_c1_g4_i2 35.57753606 22.04561996 49.10945216 2.227628538 1.15550868 0.006143772 0.025256679 Up 1.338312 1.428858 0.8114244 1.888266 2.15951 2.331788 XP_011085923.1 DNA-directed RNA polymerase III subunit 2 [Sesamum indicum] F4KD38|NRPC2_ARATH DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana OX=3702 GN=NRPC2 PE=2 SV=1 sind:105167808 K03021 "RPC2, POLR3B" DNA-directed RNA polymerase III subunit RPC2 ko00230|ko00240|ko03020 Purine metabolism|Pyrimidine metabolism|RNA polymerase KOG0215 "RNA polymerase III, second largest subunit" [K] INFORMATION STORAGE AND PROCESSING Transcription K COG0085 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity) Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-directed 5'-3' RNA polymerase activity (GO:0003899);|Cellular Component: RNA polymerase III complex (GO:0005666);|Biological Process: transcription by RNA polymerase III (GO:0006383);|Biological Process: megagametogenesis (GO:0009561);|Molecular Function: ribonucleoside binding (GO:0032549);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN30496_c1_g1_i1 88.92205306 119.22724 58.61686609 0.491639881 -1.024326146 0.000188046 0.001176242 Down 14.40299 9.704601 13.4863 4.426273 5.65393 4.816906 XP_011074393.1 subtilisin-like protease SBT1.9 [Sesamum indicum] Q9FHA4|SBT19_ARATH Subtilisin-like protease SBT1.9 OS=Arabidopsis thaliana OX=3702 GN=SBT1.9 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576);|Biological Process: proteolysis (GO:0006508); PF05922.15 Peptidase inhibitor I9 TRINITY_DN30496_c2_g3_i1 30.37137378 48.52954125 12.21320631 0.251665398 -1.990421224 4.70E-05 0.000334698 Down 3.306601 2.300028 4.472374 0.5443946 0.9006763 0.5930054 PIN09680.1 Tripeptidyl-peptidase II [Handroanthus impetiginosus] Q9ZUF6|SBT18_ARATH Subtilisin-like protease SBT1.8 OS=Arabidopsis thaliana OX=3702 GN=SBT1.8 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506); PF00082.21 Subtilase family TRINITY_DN30501_c0_g1_i4 48.74334733 88.66683355 8.819861107 0.099471931 -3.329566713 1.69E-14 3.73E-13 Down 5.161563 4.438137 3.504908 0.641514 0.3191917 0.1077071 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30501_c0_g2_i1 21.05350314 42.10700628 0 0 #NAME? 8.38E-14 1.76E-12 Down 7.363831 10.69208 8.544315 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30501_c0_g3_i1 659.0405622 1275.813559 42.26756494 0.033129892 -4.915722706 1.25E-237 1.03E-234 Down 42.6429 41.344 39.59957 1.309647 1.032702 0.9568001 KZV25329.1 hypothetical protein F511_34118 [Dorcoceras hygrometricum] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG410ZT99 Pfam:hATC Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); "PF05699.13,PF14372.5" hAT family C-terminal dimerisation region|Domain of unknown function (DUF4413) TRINITY_DN30503_c0_g2_i2 25.67121732 42.17897678 9.163457863 0.217251782 -2.202560085 0.01694672 0.05896087 Down 7.864811 8.62115 2.171977 0.9497457 1.910859 0.3970256 XP_020551132.1 CMP-sialic acid transporter 4-like [Sesamum indicum] Q9C5H6|CSTR3_ARATH CMP-sialic acid transporter 3 OS=Arabidopsis thaliana OX=3702 GN=UTR6 PE=2 SV=1 -- -- -- -- -- -- KOG2234 Predicted UDP-galactose transporter [G] METABOLISM Carbohydrate transport and metabolism EG COG0697 membrane Cellular Component: Golgi apparatus (GO:0005794);|Biological Process: carbohydrate transport (GO:0008643);|Molecular Function: sialic acid transmembrane transporter activity (GO:0015136);|Molecular Function: pyrimidine nucleotide-sugar transmembrane transporter activity (GO:0015165);|Biological Process: sialic acid transport (GO:0015739);|Cellular Component: integral component of Golgi membrane (GO:0030173); -- -- TRINITY_DN3050_c0_g1_i1 9.621252266 2.207029917 17.03547462 7.718732984 2.948364051 0.005850126 0.024244935 Up 0.3885204 0 0.5843604 3.442779 1.296599 1.339684 EPS66010.1 "hypothetical protein M569_08764, partial [Genlisea aurea]" Q6TGC6|CBK1_PNECA Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii OX=4754 GN=CBK1 PE=2 SV=1 fve:101303408 K08790 "STK38, NDR" serine/threonine kinase 38 -- -- KOG0605 NDR and related serine/threonine kinases [R] POORLY CHARACTERIZED General function prediction only T ENOG410XQC0 serine threonine-protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524); -- -- TRINITY_DN30518_c0_g5_i1 43.2577739 2.312087404 84.20346039 36.41880504 5.186611681 1.72E-22 6.51E-21 Up 0.05053295 0.1947254 0.1150265 2.932076 3.591936 3.024258 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30519_c0_g1_i1 115.0804138 74.17993916 155.9808885 2.102736808 1.072268284 1.47E-05 0.000115361 Up 5.319989 8.472987 9.17809 12.74046 13.48455 12.95771 PIN02163.1 Serine/threonine protein kinase [Handroanthus impetiginosus] O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana OX=3702 GN=B120 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- T ENOG4110XTI serine threonine-protein kinase -- PF01453.23 D-mannose binding lectin TRINITY_DN30519_c2_g1_i11 417.4870156 253.8756997 581.0983314 2.288908833 1.194660001 5.76E-10 8.43E-09 Up 9.288543 8.80882 6.395306 17.25283 14.65193 13.30721 XP_011096175.2 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Sesamum indicum] Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF00954.19,PF08276.10,PF01453.23" S-locus glycoprotein domain|PAN-like domain|D-mannose binding lectin TRINITY_DN30520_c0_g1_i1 29.77533089 56.53501434 3.01564744 0.053341234 -4.228604984 1.96E-12 3.70E-11 Down 5.571804 5.473767 5.093596 0 0.2270759 0.4545674 XP_012832737.1 PREDICTED: uncharacterized protein LOC105953608 [Erythranthe guttata] F4IG73|BCHC2_ARATH BEACH domain-containing protein C2 OS=Arabidopsis thaliana OX=3702 GN=BCHC2 PE=1 SV=1 -- -- -- -- -- -- KOG1787 Kinase A-anchor protein Neurobeachin and related BEACH and WD40 repeat proteins [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " S ENOG410XNQC beige BEACH domain containing protein -- -- -- TRINITY_DN30520_c0_g3_i1 21.30270815 37.08540659 5.520009713 0.148845873 -2.748108875 1.17E-05 9.38E-05 Down 4.601894 4.164051 3.988765 0.289342 0.8585221 0.2964888 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30526_c1_g1_i3 372.4029074 627.7247972 117.0810176 0.186516477 -2.422625011 3.99E-57 5.25E-55 Down 60.22237 54.61038 57.78603 8.053883 8.899574 9.043166 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30526_c1_g2_i2 893.8414662 1526.493223 261.1897099 0.171104402 -2.547051219 1.83E-71 3.22E-69 Down 179.2121 198.6833 164.0872 26.07987 22.12469 26.54337 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30530_c0_g3_i1 35.74467824 66.85989632 4.629460161 0.069241211 -3.852225241 7.28E-11 1.18E-09 Down 6.319777 8.129532 4.475596 5.32E-78 5.86E-27 1.032603 XP_025687474.1 chromatin-remodeling ATPase INO80-like isoform X1 [Arachis hypogaea] Q8RXS6|INO80_ARATH Chromatin-remodeling ATPase INO80 OS=Arabidopsis thaliana OX=3702 GN=INO80 PE=2 SV=2 egu:105057676 K11665 "INO80, INOC1" DNA helicase INO80 -- -- KOG0388 SNF2 family DNA-dependent ATPase [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L ENOG410XP0A chromatin modification "Molecular Function: DNA binding (GO:0003677);|Molecular Function: ATP binding (GO:0005524);|Biological Process: DNA repair (GO:0006281);|Biological Process: chromatin remodeling (GO:0006338);|Biological Process: transcription, DNA-templated (GO:0006351);|Molecular Function: ATPase activity (GO:0016887);|Cellular Component: Ino80 complex (GO:0031011);|Biological Process: DNA duplex unwinding (GO:0032508);|Molecular Function: histone binding (GO:0042393);|Biological Process: nucleosome mobilization (GO:0042766);|Biological Process: ATP-dependent chromatin remodeling (GO:0043044);|Biological Process: regulation of transcription from RNA polymerase II promoter in response to stress (GO:0043618);" -- -- TRINITY_DN30536_c2_g1_i3 193.0352794 116.9769297 269.093629 2.300399144 1.201884206 2.03E-10 3.13E-09 Up 3.285144 3.40581 3.144774 5.611236 6.692387 5.940089 XP_011093795.1 beta-amyrin synthase [Sesamum indicum] Q8W3Z1|BAMS_BETPL Beta-amyrin synthase OS=Betula platyphylla OX=78630 GN=OSCBPY PE=1 SV=1 sind:105173656 K15813 LUP4 beta-amyrin synthase ko00909 Sesquiterpenoid and triterpenoid biosynthesis KOG0497 Oxidosqualene-lanosterol cyclase and related proteins [I] METABOLISM Lipid transport and metabolism I COG1657 Squalene--hopene cyclase Biological Process: pentacyclic triterpenoid biosynthetic process (GO:0019745);|Molecular Function: beta-amyrin synthase activity (GO:0042300); "PF13243.5,PF13249.5,PF00432.20" Squalene-hopene cyclase C-terminal domain|Squalene-hopene cyclase N-terminal domain|Prenyltransferase and squalene oxidase repeat TRINITY_DN30538_c0_g1_i2 12.02681246 20.23757373 3.816051194 0.188562683 -2.406883906 0.003364126 0.015074806 Down 1.610091 2.26222 1.151421 0.1079507 0.1069357 0.5911776 PIN08215.1 Nucleoplasmin ATPase [Handroanthus impetiginosus] F4J7T3|EAF1A_ARATH Chromatin modification-related protein EAF1 A OS=Arabidopsis thaliana OX=3702 GN=EAF1A PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of flower development (GO:0009909);|Cellular Component: NuA4 histone acetyltransferase complex (GO:0035267);|Biological Process: histone H4-K5 acetylation (GO:0043981);|Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510); -- -- TRINITY_DN30538_c0_g5_i1 10.50868881 21.01737763 0 0 #NAME? 3.28E-07 3.38E-06 Down 2.817172 4.632885 4.033635 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30539_c2_g1_i5 260.0167382 454.2325058 65.8009707 0.144861871 -2.78725018 3.44E-52 3.95E-50 Down 22.46017 22.60594 22.20049 2.849296 2.378882 2.657194 PKU82447.1 Nucleobase-ascorbate transporter 2 [Dendrobium catenatum] Q94C70|NAT2_ARATH Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana OX=3702 GN=NAT2 PE=2 SV=2 pop:POPTR_0011s07170g K14611 "SLC23A1_2, SVCT1_2" "solute carrier family 23 (nucleobase transporter), member 1/2" -- -- KOG1292 Xanthine/uracil transporters [F] METABOLISM Nucleotide transport and metabolism F COG2233 permease Cellular Component: plasmodesma (GO:0009506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); -- -- TRINITY_DN30539_c2_g3_i6 259.1300661 476.6593837 41.60074859 0.087275631 -3.518277304 2.01E-72 3.57E-70 Down 28.11935 27.32755 26.80741 2.429063 1.538581 1.825299 RDX91444.1 "Nucleobase-ascorbate transporter 1, partial [Mucuna pruriens]" Q94C70|NAT2_ARATH Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana OX=3702 GN=NAT2 PE=2 SV=2 sind:105179478 K14611 "SLC23A1_2, SVCT1_2" "solute carrier family 23 (nucleobase transporter), member 1/2" -- -- KOG1292 Xanthine/uracil transporters [F] METABOLISM Nucleotide transport and metabolism F COG2233 permease Cellular Component: plasmodesma (GO:0009506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); -- -- TRINITY_DN30539_c2_g5_i1 26.59520554 53.19041107 0 0 #NAME? 8.17E-08 9.13E-07 Down 5.432841 15.23297 8.094671 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30540_c0_g5_i1 16.39667094 27.57509665 5.21824523 0.189237604 -2.401729292 0.000798065 0.004276032 Down 3.900275 3.429136 7.103321 1.607483 8.67E-79 0.6581338 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30547_c1_g3_i2 371.8526059 554.0391624 189.6660494 0.34233329 -1.546526501 7.06E-27 3.43E-25 Down 41.57078 50.47361 49.37992 14.31296 12.52825 12.21242 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30547_c1_g7_i1 614.4899415 1053.738447 175.241436 0.166304491 -2.588100966 6.20E-82 1.30E-79 Down 88.51399 100.2081 104.1082 12.1117 14.21509 13.03004 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30547_c2_g1_i1 19.62118003 30.6068572 8.635502864 0.28214275 -1.825502816 0.002878005 0.013194758 Down 7.567987 5.464831 5.321433 2.324673 0 1.843363 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30548_c1_g2_i1 26.54302319 35.66550206 17.42054433 0.488442425 -1.033739579 0.037829036 0.113442125 Down 1.661784 1.915702 2.271183 0.3649153 1.14449 0.7744444 PIN02062.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q2R2D5|XA21_ORYSJ Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: cortical endoplasmic reticulum (GO:0032541);|Cellular Component: perinuclear endoplasmic reticulum membrane (GO:1990578); "PF13855.5,PF12799.6,PF00560.32,PF13516.5" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine Rich repeat TRINITY_DN30549_c2_g3_i1 4.535520552 9.071041104 0 0 #NAME? 0.001837914 0.008934295 Down 0.3933316 2.275146 2.728231 0 3.67E-100 9.66E-27 XP_012844854.1 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Erythranthe guttata] O64780|Y1614_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61400 OS=Arabidopsis thaliana OX=3702 GN=At1g61400 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- PF01453.23 D-mannose binding lectin TRINITY_DN30549_c2_g4_i1 11.69122474 4.726149509 18.65629997 3.947462925 1.980925716 0.040846931 0.120619616 Up 1.154132 0.1801457 1.558378 0.9387984 4.019153 4.192909 XP_022848663.1 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Olea europaea var. sylvestris] O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF01453.23 D-mannose binding lectin TRINITY_DN30549_c2_g5_i1 9.642561249 3.560446108 15.72467639 4.416490494 2.142900406 0.01566269 0.055354757 Up 0.06544763 0.5711025 0.1472929 0.774107 0.7076991 1.364544 EYU30747.1 "hypothetical protein MIMGU_mgv1a025084mg, partial [Erythranthe guttata]" Q9LPZ3|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana OX=3702 GN=At1g11410 PE=3 SV=3 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN30551_c0_g1_i3 256.6901067 357.0599242 156.3202892 0.437798472 -1.191661175 7.29E-13 1.43E-11 Down 4.283189 4.773962 5.300241 1.850451 1.597883 1.619713 XP_026657612.1 uncharacterized protein LOC113461736 [Phoenix dactylifera] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" "PF00078.26,PF03732.16,PF13975.5,PF00665.25,PF09337.9" Reverse transcriptase (RNA-dependent DNA polymerase)|Retrotransposon gag protein|gag-polyprotein putative aspartyl protease|Integrase core domain|His(2)-Cys(2) zinc finger TRINITY_DN30556_c0_g1_i1 19.28348705 33.37509862 5.191875486 0.155561353 -2.68444441 4.58E-05 0.000326754 Down 6.051546 6.553662 4.50744 0.6974989 0.7093211 0.7180829 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30556_c2_g3_i1 27.25900178 38.90581878 15.61218478 0.401281486 -1.317313498 0.011620429 0.04314024 Down 3.391201 5.166977 2.243901 1.047445 1.221523 1.185055 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30557_c1_g3_i1 30.47776829 17.97561568 42.9799209 2.39101245 1.257621642 0.012628254 0.046247225 Up 0.301893 1.436574 1.661911 1.771912 1.875763 2.898776 XP_011090807.1 uncharacterized protein At5g19025 [Sesamum indicum] P0C8Q9|Y5902_ARATH Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 PE=2 SV=3 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YMD7 NA Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN30557_c1_g4_i1 8.281483761 15.79139083 0.771576693 0.048860591 -4.355184867 0.033198504 0.102364034 Down 0.1935032 4.428789 2.222279 1.25E-32 0.008915161 0.2634351 XP_011090807.1 uncharacterized protein At5g19025 [Sesamum indicum] P0C8Q9|Y5902_ARATH Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 PE=2 SV=3 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YMD7 NA Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN30558_c0_g1_i4 13.44674309 23.20820575 3.685280424 0.15879213 -2.654788683 0.00083373 0.00444718 Down 1.712494 2.665431 1.636256 0.2546824 0.3786153 0.1336022 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30558_c0_g6_i1 7.019182042 12.20081816 1.837545922 0.150608418 -2.731125686 0.015875332 0.055939058 Down 0.755324 2.978577 3.526939 0.8098902 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30567_c0_g3_i1 15.92302503 25.8745073 5.971542761 0.230788656 -2.115355783 0.002402532 0.011279152 Down 2.896778 2.782304 2.228542 0.9884639 0 0.4685174 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30568_c0_g1_i1 11.7359947 22.73697104 0.735018369 0.032327013 -4.95111596 3.29E-06 2.90E-05 Down 2.050613 3.576952 2.427224 0.1718234 0 0 PNT45967.1 hypothetical protein POPTR_003G164300v3 [Populus trichocarpa] Q8LL04|CPL3_ARATH RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis thaliana OX=3702 GN=CPL3 PE=1 SV=2 sind:105156794 K18999 CPL3_4 RNA polymerase II C-terminal domain phosphatase-like 3/4 -- -- -- -- -- -- -- K COG5190 "CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)" Molecular Function: RNA binding (GO:0003723);|Cellular Component: nucleus (GO:0005634);|Molecular Function: protein C-terminus binding (GO:0008022);|Molecular Function: RNA polymerase II CTD heptapeptide repeat phosphatase activity (GO:0008420);|Biological Process: response to salt stress (GO:0009651);|Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: dephosphorylation of RNA polymerase II C-terminal domain (GO:0070940); -- -- TRINITY_DN30569_c0_g1_i4 1873.774257 2660.680917 1086.867597 0.408492273 -1.291619305 1.05E-59 1.47E-57 Down 50.7977 50.71687 52.12221 16.54821 16.37307 17.76573 PIN02432.1 Chaperone HSP104 [Handroanthus impetiginosus] O80875|SMXL7_ARATH Protein SMAX1-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=SMXL7 PE=1 SV=1 -- -- -- -- -- -- KOG1051 Chaperone HSP104 and related ATP-dependent Clp proteases [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0542 ATP-dependent CLP protease ATP-binding subunit Cellular Component: nucleus (GO:0005634);|Biological Process: protein metabolic process (GO:0019538); -- -- TRINITY_DN30572_c0_g1_i1 1231.860166 1813.351537 650.3687954 0.358655662 -1.47932869 7.67E-60 1.08E-57 Down 17.52831 17.86184 18.23896 5.428486 4.871686 5.222564 XP_011096664.1 ABC transporter C family member 12-like isoform X2 [Sesamum indicum] Q42093|AB2C_ARATH ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 SV=2 -- -- -- -- -- -- KOG0054 "Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1132 (ABC) transporter "Cellular Component: plant-type vacuole (GO:0000325);|Molecular Function: calmodulin binding (GO:0005516);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Molecular Function: xenobiotic transmembrane transporting ATPase activity (GO:0008559);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: transmembrane transport (GO:0055085);|Molecular Function: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity (GO:1902417);|Biological Process: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport (GO:1902418);" "PF00664.22,PF00005.26,PF02463.18,PF01926.22" ABC transporter transmembrane region|ABC transporter|RecF/RecN/SMC N terminal domain|50S ribosome-binding GTPase TRINITY_DN30577_c1_g1_i13 146.5713523 204.5749901 88.56771439 0.432935201 -1.207776988 3.23E-08 3.82E-07 Down 9.876414 8.450505 8.582037 2.949166 3.033734 3.461815 XP_012852205.1 PREDICTED: uncharacterized protein At3g49140-like [Erythranthe guttata] Q0WMN5|Y3913_ARATH Uncharacterized protein At3g49140 OS=Arabidopsis thaliana OX=3702 GN=At3g49140 PE=1 SV=2 -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y9JQ NA -- -- -- TRINITY_DN30580_c0_g1_i5 96.39216222 162.103243 30.68108139 0.18926877 -2.401491716 1.04E-08 1.31E-07 Down 12.92424 8.315063 13.58126 0.882134 2.8486 1.569848 XP_023881568.1 NLR family CARD domain-containing protein 3 isoform X2 [Quercus suber] -- -- -- -- -- -- -- -- KOG4308 LRR-containing protein [S] POORLY CHARACTERIZED Function unknown S ENOG410ZBX3 leucine Rich Repeat -- -- -- TRINITY_DN30583_c0_g2_i1 50.34176105 80.1344794 20.54904269 0.256431973 -1.963351938 2.18E-07 2.30E-06 Down 5.099126 4.572801 5.093711 0.8861571 0.8788585 1.327507 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30587_c0_g1_i1 13.61510026 27.23020051 0 0 #NAME? 1.97E-08 2.40E-07 Down 3.889474 1.992239 5.139368 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30587_c3_g1_i11 219.284517 395.5785652 42.99046879 0.108677448 -3.201875507 1.08E-32 6.66E-31 Down 16.15831 20.45913 21.9027 1.486465 1.363321 2.294729 XP_011081484.1 uncharacterized protein LOC105164531 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y0Z9 Man1-Src1p-C-terminal domain -- -- -- TRINITY_DN30595_c0_g2_i1 13.3945797 5.822684673 20.96647473 3.600826064 1.848327913 0.01934125 0.065977108 Up 0.1590862 0.6444268 1.677327 2.796922 1.237613 3.244991 XP_011083423.1 uncharacterized protein LOC105165961 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZMIW Complex 1 protein (LYR family) -- -- -- TRINITY_DN30596_c0_g3_i1 7.694205809 2.585170223 12.8032414 4.952571897 2.308177919 0.027389971 0.087569584 Up 0.5348022 0.253066 0.4147843 1.720545 0.4905133 2.722622 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN305_c0_g1_i1 17.15238219 34.30476438 0 0 #NAME? 1.99E-11 3.43E-10 Down 4.163376 3.263732 4.844079 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30600_c1_g1_i1 4.218265038 0 8.436530076 Inf Inf 0.001625533 0.00802303 Up 0 0 0 1.46049 1.312886 0.3197012 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30600_c2_g4_i1 24.67049785 49.34099569 0 0 #NAME? 1.21E-12 2.33E-11 Down 3.414906 6.58286 7.508889 4.83E-13 9.88E-14 6.34E-21 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30602_c0_g1_i1 73.14456272 98.91934214 47.3697833 0.47887281 -1.062285573 0.000475573 0.002702177 Down 5.983841 5.839801 6.155644 1.831836 3.10447 1.995123 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30614_c0_g2_i1 29.92482734 50.38407302 9.465581663 0.187868529 -2.412204686 0.000838315 0.004468489 Down 15.96817 7.784857 8.771313 1.611794 3.220409 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30615_c0_g1_i1 10.1448498 20.28969959 0 0 #NAME? 5.34E-07 5.34E-06 Down 2.853512 1.866355 3.114239 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30622_c1_g2_i1 12.2345606 22.64739712 1.821724075 0.080438563 -3.635968885 0.000361069 0.002112933 Down 2.3666 3.820968 1.26723 0.2165154 0.3175799 0 XP_011082506.1 shikimate O-hydroxycinnamoyltransferase [Sesamum indicum] Q8GSM7|HST_TOBAC Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum OX=4097 GN=HST PE=1 SV=1 sind:105165248 K13065 "E2.3.1.133, HCT" shikimate O-hydroxycinnamoyltransferase ko00940|ko00945|ko00941 "Phenylpropanoid biosynthesis|Stilbenoid, diarylheptanoid and gingerol biosynthesis|Flavonoid biosynthesis" -- -- -- -- -- S ENOG410XPQ7 hydroxycinnamoyl-Coenzyme A shikimate quinate hydroxycinnamoyltransferase-like Molecular Function: shikimate O-hydroxycinnamoyltransferase activity (GO:0047172); PF02458.14 Transferase family TRINITY_DN30629_c1_g3_i2 9.158574259 18.31714852 0 0 #NAME? 2.92E-06 2.60E-05 Down 2.309185 2.922147 1.256385 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30633_c2_g2_i1 252.6357933 408.4030703 96.86851636 0.237188512 -2.075893962 7.19E-19 2.18E-17 Down 29.5451 28.86336 23.09267 6.288793 6.487614 2.777687 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30633_c2_g5_i1 32.77791983 61.50832399 4.04751566 0.065804356 -3.925673098 1.51E-12 2.88E-11 Down 6.979089 7.180162 8.134704 0.2955098 0.5995059 0.1824755 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30633_c2_g6_i1 72.72651043 144.7180025 0.735018369 0.00507897 -7.62124838 7.56E-12 1.35E-10 Down 17.72748 9.864195 24.49586 0.1936585 5.65E-10 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30633_c4_g1_i1 53.27446768 0 106.5489354 Inf Inf 3.25E-37 2.36E-35 Up 1.91E-35 0.05786773 4.61E-22 14.19043 11.50233 11.63924 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30633_c6_g1_i1 6.641722381 12.92120953 0.362235236 0.028034158 -5.156670426 0.000516293 0.00290698 Down 2.27946 0.6436711 2.710916 0 0.1816478 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30633_c7_g1_i1 3.158978075 0 6.31795615 Inf Inf 0.009330912 0.035987855 Up 0 0 0 0.8767782 0.4491605 0.6044449 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30634_c1_g1_i7 133.3045284 205.8788907 60.73016607 0.294980053 -1.761310695 7.57E-11 1.22E-09 Down 9.81327 13.15041 9.374325 2.295533 3.12986 2.248007 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30634_c1_g2_i1 67.4502192 119.3325432 15.56789519 0.130458086 -2.938341727 5.54E-17 1.48E-15 Down 14.45518 15.27988 19.84822 2.261925 1.534582 1.4699 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30634_c1_g3_i1 106.2712178 202.2159795 10.32645617 0.05106647 -4.291479866 7.01E-41 5.76E-39 Down 16.82939 16.81651 19.72231 1.336788 0.563242 0.373751 RAL41488.1 hypothetical protein DM860_010282 [Cuscuta australis] Q9LV35|AIP12_ARATH Actin-interacting protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=AIP1-2 PE=2 SV=1 -- -- -- -- -- -- KOG0318 WD40 repeat stress protein/actin interacting protein [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton S ENOG410XQN1 actin filament depolymerization "Cellular Component: cytosol (GO:0005829);|Biological Process: actin filament depolymerization (GO:0030042);|Biological Process: positive regulation of actin filament depolymerization (GO:0030836);|Cellular Component: cortical actin cytoskeleton (GO:0030864);|Cellular Component: actomyosin, actin portion (GO:0042643);|Molecular Function: actin filament binding (GO:0051015);|Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);" -- -- TRINITY_DN30635_c1_g6_i1 9.100063974 18.20012795 0 0 #NAME? 3.07E-06 2.72E-05 Down 5.335599 3.43666 2.789349 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30637_c1_g4_i1 6.139094774 1.248358704 11.02983084 8.835465968 3.143306222 0.008316771 0.032657891 Up 0 0.7278455 0 2.379558 2.411229 0.7645092 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30643_c1_g1_i1 6.68212227 13.36424454 0 0 #NAME? 0.012590323 0.046123198 Down 1.028629 4.353051 0.7861298 0 0 0 CDP17632.1 unnamed protein product [Coffea canephora] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN30643_c1_g3_i1 5.861910381 11.72382076 0 0 #NAME? 0.000255954 0.00155307 Down 1.172609 1.08709 2.043181 6.04E-90 5.81E-71 1.77E-60 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF13855.5,PF12799.6" Leucine rich repeat|Leucine Rich repeats (2 copies) TRINITY_DN30643_c2_g2_i4 77.09508646 119.6301123 34.56006065 0.288890982 -1.791402924 5.74E-09 7.45E-08 Down 4.871109 5.406801 4.211564 0.6583679 1.480516 1.257881 XP_012850532.1 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN30643_c2_g3_i2 234.7420562 320.3043142 149.1797983 0.465743956 -1.102391049 1.94E-08 2.36E-07 Down 26.71159 20.59184 24.85649 7.082338 8.809132 11.23429 XP_012833553.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Erythranthe guttata] Q2R2D5|XA21_ORYSJ Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: cortical endoplasmic reticulum (GO:0032541);|Cellular Component: perinuclear endoplasmic reticulum membrane (GO:1990578); "PF13855.5,PF00069.24,PF07714.16,PF00560.32,PF12799.6" Leucine rich repeat|Protein kinase domain|Protein tyrosine kinase|Leucine Rich Repeat|Leucine Rich repeats (2 copies) TRINITY_DN30647_c1_g3_i1 15.79323145 28.22404275 3.362420146 0.119133186 -3.069352741 4.31E-05 0.000308629 Down 3.607573 6.213368 3.628635 0.8707975 0 0.3902902 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30647_c1_g4_i1 15.39174367 7.128651413 23.65483593 3.318276426 1.730434074 0.007539813 0.030056622 Up 0.724179 0.5978326 0.1545654 1.138143 1.795724 1.030674 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30650_c0_g3_i1 42.98464287 27.1128646 58.85642114 2.170793164 1.118222271 0.002551591 0.011878203 Up 1.737428 1.833906 0.657759 2.565955 2.806187 2.005559 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30650_c0_g4_i1 5.445009963 9.393972762 1.496047164 0.159256068 -2.650579752 0.042111824 0.123614979 Down 0.827216 2.693058 1.275658 0.000694584 0.2692638 0.2890958 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30655_c1_g1_i9 845.2240673 1128.763799 561.6843355 0.497610161 -1.006912151 7.76E-23 2.99E-21 Down 23.60614 20.37274 20.74857 8.573566 8.725599 8.694344 XP_011080411.1 rho GTPase-activating protein 7 isoform X2 [Sesamum indicum] Q8RWQ4|RGAP7_ARATH Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 -- -- -- -- -- -- KOG4271 Rho-GTPase activating protein [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XR4E rho GTPase activating protein Molecular Function: GTPase activator activity (GO:0005096);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: signal transduction (GO:0007165);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: cell plate formation involved in plant-type cell wall biogenesis (GO:0009920); "PF00620.26,PF14389.5,PF00169.28" RhoGAP domain|Leucine-zipper of ternary complex factor MIP1|PH domain TRINITY_DN30664_c0_g2_i2 9.664117805 16.32559338 3.002642227 0.183922394 -2.442830941 0.00760329 0.030267133 Down 1.428798 3.507241 2.789528 0.2803208 0.2858867 0.5875945 PIA64368.1 hypothetical protein AQUCO_00100089v1 [Aquilegia coerulea] O80988|GCSP2_ARATH "Glycine dehydrogenase (decarboxylating) 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GLDP2 PE=1 SV=1" cmo:103487785 K00281 "GLDC, gcvP" glycine dehydrogenase ko00260|ko00630 "Glycine, serine and threonine metabolism|Glyoxylate and dicarboxylate metabolism" KOG2040 Glycine dehydrogenase (decarboxylating) [E] METABOLISM Amino acid transport and metabolism E COG0403 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor Molecular Function: glycine dehydrogenase (decarboxylating) activity (GO:0004375);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: glycine cleavage complex (GO:0005960);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast envelope (GO:0009941);|Molecular Function: glycine binding (GO:0016594);|Biological Process: glycine decarboxylation via glycine cleavage system (GO:0019464);|Cellular Component: apoplast (GO:0048046); -- -- TRINITY_DN30676_c1_g2_i1 4.564105718 9.128211437 0 0 #NAME? 0.021938854 0.072973577 Down 0 3.697122 2.017074 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30680_c0_g1_i1 40.20087989 23.5373378 56.86442199 2.415924114 1.272575139 0.031522104 0.098146845 Up 5.525547 7.285785 1.967405 14.19073 5.830144 8.825382 PIN00668.1 Arylacetamide deacetylase [Handroanthus impetiginosus] Q9LMA7|CXE1_ARATH Probable carboxylesterase 1 OS=Arabidopsis thaliana OX=3702 GN=CXE1 PE=2 SV=1 -- -- -- -- -- -- KOG1515 Arylacetamide deacetylase [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms I COG0657 alpha beta hydrolase fold-3 domain protein Molecular Function: carboxylic ester hydrolase activity (GO:0052689); PF07859.12 alpha/beta hydrolase fold TRINITY_DN30683_c1_g3_i1 104.5071333 144.8019888 64.21227771 0.443448866 -1.173160338 6.30E-06 5.28E-05 Down 7.673157 8.668663 7.18529 3.685647 2.998184 1.705517 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30687_c0_g2_i1 35.58163043 49.72085199 21.44240888 0.431255862 -1.213384028 0.007385755 0.029543671 Down 5.61716 4.939416 3.34024 1.966136 1.672636 1.163251 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30691_c1_g5_i1 92.87278807 57.44420477 128.3013714 2.233495474 1.159303331 1.31E-05 0.000104226 Up 7.380996 15.18599 8.664391 15.95238 19.92886 20.36458 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30692_c0_g1_i2 17.12419213 32.39010186 1.8582824 0.057371922 -4.123511338 1.64E-07 1.76E-06 Down 2.356612 2.628639 3.423995 0 0.2573191 0.1323126 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30698_c0_g3_i1 50.86786464 31.80957095 69.92615832 2.198274175 1.136371334 0.001962031 0.009467683 Up 1.203181 1.777604 1.71508 2.025411 3.173153 3.138718 AXV54307.1 hypothetical protein (mitochondrion) [Ammopiptanthus mongolicus] -- -- eus:EUTSA_v10028891mg K03935 NDUFS2 NADH dehydrogenase (ubiquinone) Fe-S protein 2 ko00190 Oxidative phosphorylation -- -- -- -- -- C COG0649 "NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity)" -- -- -- TRINITY_DN30699_c0_g1_i3 18.52389157 28.54305104 8.504732094 0.297961563 -1.746801861 0.004661816 0.019974873 Down 3.854165 4.124591 6.071097 2.176602 0.6270521 0.6443216 XP_009395118.1 PREDICTED: protein PIR isoform X2 [Musa acuminata subsp. malaccensis] Q5S2C3|PIR_ARATH Protein PIR OS=Arabidopsis thaliana OX=3702 GN=PIR PE=1 SV=2 mus:103980423 K05749 CYFIP cytoplasmic FMR1 interacting protein ko03013 RNA transport KOG3534 p53 inducible protein PIR121 [R] POORLY CHARACTERIZED General function prediction only S ENOG410XPKW cytoplasmic FMR1 interacting protein Molecular Function: RNA 7-methylguanosine cap binding (GO:0000340);|Biological Process: cell morphogenesis (GO:0000902);|Biological Process: regulation of translation (GO:0006417);|Biological Process: trichome morphogenesis (GO:0010090);|Biological Process: actin cytoskeleton organization (GO:0030036);|Cellular Component: SCAR complex (GO:0031209);|Biological Process: actin nucleation (GO:0045010); PF07159.11 Protein of unknown function (DUF1394) TRINITY_DN30706_c0_g1_i1 38.75323056 55.59214204 21.91431909 0.394198142 -1.343007119 0.001189904 0.006086692 Down 3.467902 2.382952 4.016602 0.9617441 1.147384 1.057233 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30707_c2_g1_i3 195.376283 294.8947367 95.85782935 0.325057783 -1.621231897 3.77E-17 1.03E-15 Down 20.73024 23.39699 21.84908 5.814309 3.546822 7.998065 XP_012851770.1 PREDICTED: uncharacterized protein LOC105971463 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03004.13 Plant transposase (Ptta/En/Spm family) TRINITY_DN30737_c1_g1_i1 6.081685055 12.16337011 0 0 #NAME? 0.000178946 0.001123808 Down 2.04486 1.23406 3.823811 4.60E-20 0.001270475 4.54E-14 PIN08832.1 hypothetical protein CDL12_18589 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30737_c2_g1_i4 292.0785133 553.9089691 30.24805747 0.054608355 -4.194734499 2.38E-100 6.00E-98 Down 22.30833 22.49483 21.21495 1.328694 0.4668368 1.124063 XP_011086553.1 methyl-CpG-binding domain-containing protein 9 [Sesamum indicum] Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis thaliana OX=3702 GN=MBD9 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YCVB expressed protein "Molecular Function: histone acetyltransferase activity (GO:0004402);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: methyl-CpG binding (GO:0008327);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: secondary shoot formation (GO:0010223);|Biological Process: histone acetylation (GO:0016573);|Molecular Function: histone binding (GO:0042393);|Biological Process: histone H3 acetylation (GO:0043966);|Biological Process: histone H4 acetylation (GO:0043967);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: photoperiodism, flowering (GO:0048573);" -- -- TRINITY_DN30749_c2_g5_i1 15.7547567 24.84514386 6.664369539 0.268236303 -1.89842359 0.006187428 0.025392451 Down 4.631939 4.427934 3.91754 0.8073542 1.200625 0.8863476 XP_012836010.1 PREDICTED: LOW QUALITY PROTEIN: valine--tRNA ligase-like [Erythranthe guttata] P93736|SYVM1_ARATH "Valine--tRNA ligase, mitochondrial 1 OS=Arabidopsis thaliana OX=3702 GN=TWN2 PE=1 SV=2" vra:106771840 K01873 "VARS, valS" valyl-tRNA synthetase ko00970 Aminoacyl-tRNA biosynthesis KOG0432 Valyl-tRNA synthetase [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0525 "amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner (By similarity)" Molecular Function: aminoacyl-tRNA editing activity (GO:0002161);|Molecular Function: valine-tRNA ligase activity (GO:0004832);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: cytosol (GO:0005829);|Biological Process: valyl-tRNA aminoacylation (GO:0006438);|Cellular Component: chloroplast (GO:0009507);|Biological Process: embryo development ending in seed dormancy (GO:0009793); -- -- TRINITY_DN30752_c2_g1_i9 161.9920146 247.7160024 76.2680269 0.307884942 -1.699536787 7.77E-08 8.70E-07 Down 8.709421 9.065834 13.01736 2.344621 2.519057 2.804765 XP_012839626.1 "PREDICTED: biotin carboxylase 1, chloroplastic [Erythranthe guttata]" B9HBA8|ACCC1_POPTR "Biotin carboxylase 1, chloroplastic OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_831870 PE=2 SV=1" sind:105156122 K01961 accC "acetyl-CoA carboxylase, biotin carboxylase subunit" ko00061|ko00620|ko00640 Fatty acid biosynthesis|Pyruvate metabolism|Propanoate metabolism KOG0238 "3-Methylcrotonyl-CoA carboxylase, biotin-containing subunit/Propionyl-CoA carboxylase, alpha chain/Acetyl-CoA carboxylase, biotin carboxylase subunit" [IE] METABOLISM|METABOLISM Lipid transport and metabolism |Amino acid transport and metabolism I COG0439 acetyl-CoA carboxylase biotin carboxylase Molecular Function: acetyl-CoA carboxylase activity (GO:0003989);|Molecular Function: biotin carboxylase activity (GO:0004075);|Molecular Function: ATP binding (GO:0005524);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: malonyl-CoA biosynthetic process (GO:2001295); -- -- TRINITY_DN30752_c2_g3_i1 43.53431089 87.06862178 0 0 #NAME? 5.92E-12 1.07E-10 Down 20.05366 19.31105 8.163744 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30752_c2_g4_i1 18.37470932 35.20626526 1.543153387 0.043831783 -4.511878816 5.75E-06 4.86E-05 Down 7.889654 3.345151 9.531448 0 0 0.7489542 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30752_c2_g6_i1 35.1732368 68.17306219 2.173411413 0.031880795 -4.971168589 1.06E-16 2.78E-15 Down 10.57709 11.07258 12.32859 0 0.8404574 1.80E-55 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30755_c1_g3_i1 15.61383469 29.77872844 1.448940942 0.048656911 -4.361211454 4.49E-07 4.54E-06 Down 4.259224 5.545917 2.91938 0 0.4448902 4.06E-78 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30764_c2_g2_i1 48.69789908 89.28458567 8.111212483 0.090846728 -3.460421633 0.000215804 0.001332243 Down 9.168897 28.67419 18.97409 3.388758 0.4418674 0.4755404 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30769_c1_g1_i5 320.0198542 524.3016642 115.7380443 0.220747047 -2.179533953 2.65E-42 2.28E-40 Down 22.14651 21.04685 22.55176 3.856709 4.202784 3.636259 XP_020548790.1 ABC transporter G family member 24 isoform X2 [Sesamum indicum] Q9MAG3|AB24G_ARATH ABC transporter G family member 24 OS=Arabidopsis thaliana OX=3702 GN=ABCG24 PE=2 SV=2 -- -- -- -- -- -- KOG0061 "Transporter, ABC superfamily (Breast cancer resistance protein)" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1131 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: transmembrane transport (GO:0055085);" -- -- TRINITY_DN30770_c1_g1_i1 25.57673439 49.70452783 1.448940942 0.029151086 -5.100306582 8.52E-13 1.65E-11 Down 8.505771 5.955361 10.4357 2.42E-59 0.5682998 6.89E-59 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30770_c2_g1_i8 127.5357744 204.8957681 50.1757807 0.244884417 -2.029827123 4.05E-17 1.10E-15 Down 7.639651 8.604486 9.109666 1.975078 1.402706 1.645127 XP_011074096.1 G2/mitotic-specific cyclin-2 [Sesamum indicum] Q9LDM4|CCB23_ARATH Cyclin-B2-3 OS=Arabidopsis thaliana OX=3702 GN=CYCB2-3 PE=2 SV=2 -- -- -- -- -- -- KOG0653 Cyclin B and related kinase-activating proteins [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " D COG5024 g2 mitotic-specific Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);|Biological Process: mitotic cell cycle (GO:0000278);|Cellular Component: cyclin-dependent protein kinase holoenzyme complex (GO:0000307);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: centrosome (GO:0005813);|Biological Process: protein phosphorylation (GO:0006468);|Biological Process: regulation of mitotic nuclear division (GO:0007088);|Biological Process: positive regulation of cell proliferation (GO:0008284);|Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);|Molecular Function: protein kinase binding (GO:0019901);|Biological Process: positive regulation of cell cycle (GO:0045787);|Biological Process: cell division (GO:0051301); -- -- TRINITY_DN30770_c2_g2_i4 47.79860591 91.54969615 4.04751566 0.044211132 -4.499446531 3.23E-20 1.07E-18 Down 9.134083 11.83102 9.332121 0.3056253 0.6076123 0.171898 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30782_c1_g1_i1 20.20012568 40.40025135 0 0 #NAME? 3.72E-13 7.44E-12 Down 6.369751 4.476619 3.73219 0 0 1.88E-54 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30782_c2_g2_i1 38.0029044 52.48049363 23.52531517 0.448267795 -1.157567239 0.005520924 0.023061683 Down 5.55088 8.428996 7.386045 1.50018 2.723209 3.467479 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30783_c1_g1_i1 20.93224476 35.55708127 6.307408253 0.177388245 -2.495017683 0.00028093 0.001688144 Down 8.705124 4.588802 4.262089 0.856624 0.8539968 0.8152539 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30784_c1_g4_i1 49.3673247 66.07152746 32.66312193 0.494360024 -1.016366008 0.006121734 0.025179762 Down 6.253775 5.718035 5.645944 2.610705 2.245098 2.17329 AES82140.1 pre-mRNA-splicing factor SF2-like protein [Medicago truncatula] O82238|NDS5A_ARATH NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A OS=Arabidopsis thaliana OX=3702 GN=At2g47690 PE=3 SV=1 ath:AT2G47690 K03938 NDUFS5 NADH dehydrogenase (ubiquinone) Fe-S protein 5 ko00190 Oxidative phosphorylation -- -- -- -- -- I ENOG410Y2MY NADH dehydrogenase ubiquinone iron-sulfur protein Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial respiratory chain complex I (GO:0005747);|Cellular Component: mitochondrial intermembrane space (GO:0005758);|Biological Process: photorespiration (GO:0009853);|Cellular Component: mitochondrial membrane (GO:0031966);|Biological Process: mitochondrial respiratory chain complex I assembly (GO:0032981);|Cellular Component: respiratory chain complex I (GO:0045271);|Biological Process: oxidation-reduction process (GO:0055114); -- -- TRINITY_DN30786_c1_g1_i2 29.09227801 41.31551981 16.86903622 0.408297809 -1.292306269 0.005680738 0.02362706 Down 3.629627 5.19137 7.099595 1.554913 1.099672 2.528442 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30786_c1_g2_i1 18.1246126 34.01815967 2.231065533 0.065584545 -3.9305003 1.64E-07 1.75E-06 Down 5.289567 4.971831 6.495913 0.2650055 0.2849525 0.2736334 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30786_c1_g4_i2 70.48940575 108.0480261 32.9307854 0.304779149 -1.71416389 7.31E-08 8.22E-07 Down 21.54565 14.64719 19.14364 3.677644 6.047892 3.927405 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3078_c0_g1_i1 4.832748389 9.665496778 0 0 #NAME? 0.016769302 0.058460203 Down 0.3890891 3.428975 1.220172 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30792_c1_g3_i1 12.78867056 25.57734112 0 0 #NAME? 0.00157876 0.0078199 Down 1.110489 2.687355 7.089153 2.21E-57 3.35E-44 7.14E-45 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30799_c0_g2_i1 16.00006441 23.5477769 8.452351923 0.358944794 -1.478166123 0.035096145 0.107035697 Down 3.810657 2.781099 1.643282 1.405798 0.7048078 0.2469647 XP_012843906.1 PREDICTED: vacuolar protein sorting-associated protein 8 homolog isoform X2 [Erythranthe guttata] -- -- sind:105172787 K20178 VPS8 vacuolar protein sorting-associated protein 8 -- -- -- -- -- -- -- S ENOG410XRX6 vacuolar protein sorting 8 homolog (S. cerevisiae) -- -- -- TRINITY_DN307_c0_g1_i1 28.39555904 0 56.79111808 Inf Inf 2.43E-18 7.16E-17 Up 4.03E-111 0 0 3.337608 4.286398 6.204263 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30808_c0_g1_i1 18.8569604 2.232514886 35.48140591 15.89302097 3.990321476 4.25E-08 4.94E-07 Up 0 0.7478284 0.5999996 5.953596 4.293451 7.314054 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30808_c0_g2_i3 20.12398806 30.55741124 9.690564877 0.3171265 -1.656869656 0.006328802 0.025879049 Down 3.17242 3.385721 2.132002 0.5461366 0.712824 0.9002807 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30808_c0_g3_i1 6.954292791 0 13.90858558 Inf Inf 0.003837963 0.016888003 Up 0 0 0 3.655025 0 3.221728 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30808_c0_g4_i1 98.18618357 28.17818693 168.1941802 5.968949693 2.577477095 2.64E-05 0.000197272 Up 10.11416 1.628633 3.987863 20.81603 18.29913 36.26951 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30808_c1_g1_i2 11.05926293 0.246039046 21.87248681 88.89843789 6.474086163 2.75E-07 2.86E-06 Up 0 0 0.1001142 1.775335 2.168792 1.702952 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30808_c1_g2_i2 25.77689454 1.714951826 49.83883726 29.06136284 4.861030455 4.10E-13 8.18E-12 Up 0.5475568 0 0.4411273 5.813881 9.697077 9.332658 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30808_c1_g3_i4 84.50926999 21.39087634 147.6276636 6.901431305 2.786895597 1.59E-19 5.05E-18 Up 1.304036 1.854469 2.027999 8.346443 10.12373 10.40296 XP_025678617.1 "uncharacterized protein LOC112778523, partial [Arachis hypogaea]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF00665.25 Integrase core domain TRINITY_DN30808_c2_g1_i1 7.093578135 0 14.18715627 Inf Inf 0.000786204 0.004218956 Up 2.99E-69 1.60E-66 1.02E-70 2.559442 0.3067633 1.612614 XP_024441596.1 uncharacterized protein LOC112324179 [Populus trichocarpa] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN30814_c1_g1_i7 194.0160324 129.1228546 258.9092102 2.005138525 1.003701909 1.73E-07 1.85E-06 Up 2.211973 1.945882 2.684074 3.53993 3.789193 3.705623 XP_012831464.1 PREDICTED: ankyrin repeat-containing protein At5g02620-like [Erythranthe guttata] Q2V4L8|GUN3_ARATH Endoglucanase 3 OS=Arabidopsis thaliana OX=3702 GN=CEL5 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S COG0666 Ankyrin Repeat Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: cellulase activity (GO:0008810);|Cellular Component: plant-type cell wall (GO:0009505);|Biological Process: cellulose catabolic process (GO:0030245);|Biological Process: cell wall organization (GO:0071555); "PF12796.6,PF13637.5,PF13857.5,PF13962.5,PF13606.5,PF00023.29,PF00759.18" Ankyrin repeats (3 copies)|Ankyrin repeats (many copies)|Ankyrin repeats (many copies)|Domain of unknown function|Ankyrin repeat|Ankyrin repeat|Glycosyl hydrolase family 9 TRINITY_DN3081_c0_g1_i1 6.748190312 13.49638062 0 0 #NAME? 0.000112516 0.000738067 Down 3.664631 1.30183 1.576792 0 0 0 XP_018815634.1 PREDICTED: uncharacterized protein LOC108987212 [Juglans regia] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN30821_c1_g2_i1 16.86078593 26.28280898 7.438762866 0.283027696 -1.820984859 0.010150684 0.03852592 Down 4.6346 1.827691 2.579583 0.9712056 0.3798481 0.6043587 PIN21353.1 hypothetical protein CDL12_05938 [Handroanthus impetiginosus] -- -- sind:105165842 K14775 "UTP30, RSL1D1" ribosome biogenesis protein UTP30 -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30821_c2_g2_i1 83.91088455 135.387295 32.43447409 0.239568078 -2.061492408 4.03E-06 3.50E-05 Down 11.46962 12.8572 6.850904 2.440987 1.322457 2.281001 XP_022865255.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Olea europaea var. sylvestris] P08770|TRA1_MAIZE Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: transposition (GO:0032196);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN3082_c0_g1_i1 16.59467376 33.18934752 0 0 #NAME? 6.85E-11 1.11E-09 Down 5.411341 4.281825 2.901428 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30830_c1_g1_i3 253.9486551 431.5765437 76.32076639 0.176841785 -2.499468893 1.58E-43 1.41E-41 Down 29.61086 27.2927 31.63964 4.48447 3.590552 4.614016 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30830_c1_g2_i1 566.9250381 919.9581535 213.8919226 0.232501796 -2.104686237 2.88E-63 4.28E-61 Down 47.8335 46.75996 42.56808 8.534416 8.748568 8.434676 RHN45312.1 putative RNA-directed DNA polymerase [Medicago truncatula] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN30832_c0_g1_i1 6.999120683 0.651223126 13.34701824 20.49530754 4.357221733 0.000484412 0.002747263 Up 0.4109914 0 0 1.459206 2.528658 1.925113 XP_011094672.1 putative serine/threonine-protein kinase [Sesamum indicum] P85193|PK01_HELAN Putative serine/threonine-protein kinase (Fragment) OS=Helianthus annuus OX=4232 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN30832_c2_g1_i1 13.72057331 21.55890168 5.882244948 0.272845298 -1.873844914 0.010654171 0.040082718 Down 2.403866 1.969457 3.208452 0.3599306 1.079058 0.3820403 XP_011095279.2 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Sesamum indicum] O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- PF01453.23 D-mannose binding lectin TRINITY_DN30832_c4_g1_i1 9.40675935 15.00274146 3.810777245 0.254005393 -1.977068965 0.031348178 0.097719259 Down 3.268233 2.944863 1.633055 0 0.3277273 1.373121 EYU33571.1 hypothetical protein MIMGU_mgv1a020014mg [Erythranthe guttata] O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30832_c6_g1_i1 18.42572057 9.609201852 27.24223929 2.835015822 1.503356787 0.041253555 0.121614665 Up 4.258719 8.34E-11 0.1922281 2.98377 2.984551 4.210143 XP_012841567.1 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Erythranthe guttata] O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN30836_c1_g2_i1 37.76654324 54.97876984 20.55431664 0.373859159 -1.419433219 0.000828137 0.004419941 Down 2.614749 3.656804 3.148989 0.8675278 0.7342407 1.262802 KRH04544.1 hypothetical protein GLYMA_17G168800 [Glycine max] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YTD5 NA -- -- -- TRINITY_DN30836_c1_g3_i1 23.86366053 36.01239471 11.71492636 0.32530262 -1.620145652 0.003219271 0.014516619 Down 8.136052 5.410798 7.900721 1.671382 3.251029 0.5174198 -- -- P31583|RHN1_NICPL Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: protein transport (GO:0015031); -- -- TRINITY_DN30839_c1_g1_i5 25.96876961 44.77243241 7.165106809 0.160033896 -2.643550584 0.000909167 0.004794356 Down 3.420622 10.06304 8.966999 0.05186189 1.036356 1.870831 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30839_c1_g2_i1 15.56976098 5.412859003 25.72666295 4.752878827 2.248801621 0.032949868 0.101761692 Up 7.63E-19 7.33E-35 2.699799 4.53698 4.684107 1.435429 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30839_c2_g2_i1 119.303701 51.85787308 186.749529 3.601179877 1.848469663 5.19E-14 1.11E-12 Up 5.6169 6.649267 6.710203 19.66023 17.79807 17.61767 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30840_c1_g1_i4 27.29260862 42.08043503 12.50478221 0.297163806 -1.750669688 0.007239176 0.029052066 Down 6.27583 2.568753 4.300302 0.8409855 1.751805 0.5784991 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30840_c1_g3_i1 5.998389401 11.27230833 0.724470471 0.06426993 -3.959712282 0.004089626 0.017834604 Down 1.698736 0.7738983 2.162566 1.40E-14 0.2784034 1.38E-84 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30845_c1_g3_i1 22.11234198 32.38390146 11.8407825 0.365637924 -1.451512381 0.008509117 0.033315302 Down 2.641205 3.455379 4.727889 1.566339 0.9001701 0.7228555 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30848_c0_g1_i1 14.2366019 21.83238738 6.640816428 0.30417271 -1.717037374 0.019163741 0.065472365 Down 3.13348 5.138636 2.940608 0.6893025 1.371816 0.6660716 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30849_c1_g2_i1 1678.225027 1116.006869 2240.443184 2.00755322 1.005438234 1.30E-35 8.93E-34 Up 109.32 134.9775 114.6138 201.7585 188.794 190.6501 PPR82567.1 hypothetical protein GOBAR_AA38145 [Gossypium barbadense] O23755|EF2_BETVU Elongation factor 2 OS=Beta vulgaris OX=161934 PE=2 SV=1 -- -- -- -- -- -- KOG0469 Elongation factor 2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0480 "Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)" Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737); PF00679.23 Elongation factor G C-terminus TRINITY_DN30853_c3_g1_i3 32.69680624 18.41292283 46.98068965 2.551506357 1.351349236 0.002884511 0.013218969 Up 1.163144 1.074354 0.9671421 2.239587 1.771566 2.580981 PIN14604.1 Serine/threonine protein kinase [Handroanthus impetiginosus] O49839|PBL2_ARATH Probable serine/threonine-protein kinase PBL2 OS=Arabidopsis thaliana OX=3702 GN=PBL2 PE=1 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN30853_c3_g3_i1 34.16559717 10.42333619 57.90785815 5.555597274 2.473942022 9.82E-08 1.08E-06 Up 0.6320195 1.549438 0.5696872 3.224186 4.927529 4.175088 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30853_c3_g4_i1 60.32890541 28.35574113 92.30206969 3.255145731 1.702722133 3.55E-05 0.000259099 Up 1.881606 1.874024 2.300688 5.627682 3.533122 6.785265 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30855_c2_g2_i1 14.88582355 6.43842143 23.33322567 3.624060015 1.857606847 0.0314673 0.097989652 Up 1.277707 0.6793322 0.3541463 1.562608 1.551378 3.999416 XP_012857645.1 PREDICTED: putative late blight resistance protein homolog R1A-3 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30856_c0_g1_i1 38.5026245 57.21392981 19.7913192 0.345917843 -1.531498662 0.049686226 0.14098055 Down 5.119255 15.49006 10.65805 1.352317 6.017069 1.367539 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30859_c1_g4_i1 23.08497823 43.96490134 2.205055106 0.050154897 -4.317465616 5.92E-10 8.65E-09 Down 8.108592 11.18704 6.917795 1.017286 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30872_c1_g1_i2 133.5029357 214.2160534 52.78981795 0.246432595 -2.020735004 1.92E-17 5.30E-16 Down 3.504747 4.604325 3.610166 0.8202092 0.7177263 0.7909873 AAT38758.1 "Putative gag-pol polyprotein, identical [Solanum demissum]" P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); "PF14223.5,PF00665.25,PF13976.5,PF07727.13" gag-polypeptide of LTR copia-type|Integrase core domain|GAG-pre-integrase domain|Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN30875_c1_g1_i1 12.63712705 25.27425411 0 0 #NAME? 1.73E-08 2.12E-07 Down 2.16452 3.669449 2.150516 0 3.26E-33 8.14E-59 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30876_c2_g1_i5 725.2989325 1113.961628 336.6362372 0.302197337 -1.726437148 1.57E-54 1.96E-52 Down 37.41678 36.40991 35.75325 8.940387 8.310078 9.476379 XP_022859081.1 "uncharacterized protein LOC111379875, partial [Olea europaea var. sylvestris]" Q9LIS3|GAE6_ARATH UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana OX=3702 GN=GAE6 PE=1 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: endosome (GO:0005768);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: Golgi cisterna membrane (GO:0032580);|Biological Process: galacturonate biosynthetic process (GO:0033481);|Molecular Function: UDP-glucuronate 4-epimerase activity (GO:0050378);|Biological Process: defense response to Gram-negative bacterium (GO:0050829);|Biological Process: defense response to fungus (GO:0050832); -- -- TRINITY_DN30876_c2_g2_i1 341.08013 509.4094624 172.7507976 0.339119727 -1.560133386 3.00E-25 1.32E-23 Down 67.82775 66.06177 66.77987 18.66081 17.9937 18.24886 XP_023914267.1 "uncharacterized protein LOC112025811, partial [Quercus suber]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN30879_c1_g2_i5 156.9288626 242.239895 71.61783026 0.295648371 -1.758045769 2.69E-16 6.84E-15 Down 7.099046 7.639285 8.830359 1.980761 1.899992 1.763176 XP_011089807.1 centrosomal protein of 83 kDa isoform X1 [Sesamum indicum] Q8H151|AAE13_ARATH Malonate--CoA ligase OS=Arabidopsis thaliana OX=3702 GN=AAE13 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111NPH NA Cellular Component: nucleus (GO:0005634);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: cytosol (GO:0005829);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Cellular Component: membrane (GO:0016020);|Molecular Function: malonyl-CoA synthetase activity (GO:0090409);|Biological Process: malonate catabolic process (GO:0090410); -- -- TRINITY_DN30886_c1_g1_i1 25.07943978 9.074158713 41.08472085 4.527661699 2.178766166 0.0002182 0.001344476 Up 2.510817 0 3.281615 4.714916 7.141681 9.507046 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30890_c1_g2_i1 33.21430993 20.77753897 45.65108088 2.197136097 1.135624237 0.010429863 0.03940431 Up 1.65377 2.066439 1.55687 4.140307 2.439541 2.684352 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30890_c1_g4_i1 27.03662463 40.68685606 13.3863932 0.329010263 -1.603795509 0.002088986 0.010000564 Down 11.93739 7.360564 6.652546 2.21598 2.238624 2.364198 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30896_c1_g1_i4 215.7951596 319.7721957 111.8181235 0.34968057 -1.515890462 3.41E-16 8.59E-15 Down 26.62205 23.29822 21.15461 5.636197 7.493486 6.97067 XP_020551169.1 probable ribosome biogenesis protein RLP24 [Sesamum indicum] O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24 OS=Arabidopsis thaliana OX=3702 GN=At2g44860 PE=1 SV=1 nnu:104612489 K02896 "RP-L24e, RPL24" large subunit ribosomal protein L24e ko03010 Ribosome KOG1723 60s ribosomal protein L30 isolog [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2075 Ribosomal protein Biological Process: ribosomal large subunit assembly (GO:0000027);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Biological Process: assembly of large subunit precursor of preribosome (GO:1902626); -- -- TRINITY_DN30896_c2_g1_i12 342.0394909 488.2534687 195.8255132 0.40107347 -1.318061555 8.04E-12 1.43E-10 Down 20.48425 21.87458 25.13527 5.696708 6.446981 9.781244 KZV40322.1 adenylyl cyclase-associated protein 1-like [Dorcoceras hygrometricum] O65902|ACAP1_ARATH Cyclase-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=CAP1 PE=2 SV=1 sind:105172883 K17261 "CAP1_2, SRV2" adenylyl cyclase-associated protein -- -- KOG2675 Adenylate cyclase-associated protein (CAP/Srv2p) [ZT] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING Cytoskeleton |Signal transduction mechanisms S ENOG410XPXJ adenylyl cyclase-associated protein Biological Process: cell morphogenesis (GO:0000902);|Molecular Function: actin binding (GO:0003779);|Cellular Component: cytosol (GO:0005829);|Biological Process: establishment or maintenance of cell polarity (GO:0007163);|Biological Process: actin polymerization or depolymerization (GO:0008154);|Molecular Function: adenylate cyclase binding (GO:0008179);|Biological Process: unidimensional cell growth (GO:0009826);|Biological Process: actin cytoskeleton organization (GO:0030036);|Cellular Component: cortical actin cytoskeleton (GO:0030864);|Biological Process: regulation of adenylate cyclase activity (GO:0045761); PF08603.10 Adenylate cyclase associated (CAP) C terminal TRINITY_DN30897_c4_g3_i1 6.837082264 12.57163697 1.102527553 0.087699602 -3.511285902 0.004148128 0.018065432 Down 1.327524 3.45488 2.733463 0.446203 0 8.95E-40 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF13855.5,PF12799.6" Leucine rich repeat|Leucine Rich repeats (2 copies) TRINITY_DN30897_c4_g4_i1 46.1275293 28.51644497 63.73861362 2.235152863 1.160373501 0.038230689 0.114412293 Up 2.702021 1.681071 2.567115 2.055594 5.193392 5.485924 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN30899_c0_g1_i1 74.75089537 110.2124242 39.28936652 0.356487636 -1.488076056 0.000264117 0.001597332 Down 6.331367 11.69371 8.784006 2.007141 2.148135 3.626009 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30901_c1_g1_i1 7.598975158 13.73846148 1.45948884 0.106233791 -3.234685367 0.020841815 0.070022391 Down 0.9499519 2.145524 4.799539 0.2999887 0.2641918 0.001279142 XP_022850735.1 uncharacterized protein LOC111372597 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30901_c3_g1_i2 124.1088664 167.1149637 81.10276904 0.485311233 -1.043017843 4.38E-05 0.00031378 Down 3.692025 3.036034 2.946575 1.767839 1.050331 0.9519987 PRQ46594.1 "putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]" Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" "PF00078.26,PF00665.25" Reverse transcriptase (RNA-dependent DNA polymerase)|Integrase core domain TRINITY_DN30901_c3_g2_i2 93.0607517 128.5203244 57.60117904 0.448187314 -1.15782628 1.69E-05 0.000131448 Down 8.050894 9.607294 9.278878 3.503824 2.992688 3.221982 XP_022857226.1 uncharacterized protein LOC111378282 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF03732.16 Retrotransposon gag protein TRINITY_DN30902_c0_g1_i1 22.30652084 44.61304169 0 0 #NAME? 1.58E-14 3.50E-13 Down 7.231605 6.705933 5.707032 0 0 7.23E-84 XP_019191458.1 PREDICTED: 40S ribosomal protein S23-like [Ipomoea nil] P49201|RS232_ARATH 40S ribosomal protein S23-2 OS=Arabidopsis thaliana OX=3702 GN=RPS23B PE=2 SV=2 mus:103977233 K02973 "RP-S23e, RPS23" small subunit ribosomal protein S23e ko03010 Ribosome KOG1749 40S ribosomal protein S23 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0048 "Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Cellular Component: polysomal ribosome (GO:0042788); -- -- TRINITY_DN30902_c3_g1_i4 302.0618148 583.1490643 20.97456531 0.03596776 -4.797151895 2.04E-119 6.52E-117 Down 21.83465 26.11382 22.96298 0.9971174 0.1870089 0.8653446 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30902_c3_g2_i4 192.8517878 333.510676 52.19289959 0.156495439 -2.675807486 9.62E-21 3.30E-19 Down 15.05736 20.86621 18.68339 2.183423 3.568644 1.16024 XP_011073258.1 U2 small nuclear ribonucleoprotein A' [Sesamum indicum] P43333|RU2A_ARATH U2 small nuclear ribonucleoprotein A' OS=Arabidopsis thaliana OX=3702 GN=At1g09760 PE=2 SV=2 sind:105158267 K11092 SNRPA1 U2 small nuclear ribonucleoprotein A' ko03040 Spliceosome KOG1644 U2-associated snRNP A' protein [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification S COG4886 leucine Rich Repeat "Biological Process: mRNA splicing, via spliceosome (GO:0000398);|Molecular Function: RNA binding (GO:0003723);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleoplasm (GO:0005654);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: response to cold (GO:0009409);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: Cajal body (GO:0015030);" -- -- TRINITY_DN30903_c0_g1_i5 84.20426283 154.9201887 13.48833691 0.08706636 -3.521740782 3.26E-26 1.52E-24 Down 13.15174 11.19973 12.68335 0.6144393 0.722683 1.248436 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30903_c0_g2_i1 21.94066791 43.88133581 0 0 #NAME? 0.000494867 0.002797794 Down 0.8332048 10.3358 5.62292 0.02422415 1.21E-33 1.33E-35 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30903_c1_g1_i2 222.1022084 397.1920835 47.01233334 0.118361708 -3.078725676 1.81E-52 2.11E-50 Down 28.82782 25.07855 24.64688 2.894411 1.64785 2.948792 XP_023760264.1 uncharacterized protein LOC111908693 [Lactuca sativa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG411079S NA -- "PF01498.17,PF12728.6" Transposase|Helix-turn-helix domain TRINITY_DN30903_c1_g2_i6 210.6513184 396.7219002 24.58073651 0.061959616 -4.012527992 7.79E-71 1.35E-68 Down 41.39553 44.11467 38.42813 1.430706 2.289596 2.513109 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30905_c1_g1_i1 27.53419489 54.68260144 0.385788347 0.007055047 -7.147128503 2.37E-16 6.06E-15 Down 5.812604 6.379372 3.848283 0 0 0.0993448 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30905_c2_g2_i1 47.90910052 95.09373057 0.724470471 0.007618488 -7.036279531 1.87E-07 1.99E-06 Down 13.91094 9.397262 26.73651 8.04E-30 0.2850688 6.39E-33 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30907_c0_g1_i1 890193.3295 1702923.659 77463.0005 0.04548824 -4.458362566 0 0 Down 18932.92 18973.31 19634.23 708.4074 702.169 701.666 PHT73970.1 hypothetical protein T459_21247 [Capsicum annuum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF00680.19,PF00910.21,PF00548.19" RNA dependent RNA polymerase|RNA helicase|3C cysteine protease (picornain 3C) TRINITY_DN30907_c0_g2_i1 24.51709927 34.41486633 14.6193322 0.424797007 -1.235154495 0.04742017 0.135781478 Down 4.167006 7.398448 3.522038 0.4652127 1.876051 2.779749 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30909_c0_g2_i1 7.459353155 2.606013604 12.31269271 4.724723113 2.240229784 0.041350173 0.121837227 Up 0.1124883 0.1095875 0.5998692 0.8973043 0.87477 1.317053 XP_012830413.1 PREDICTED: putative disease resistance protein RGA4 [Erythranthe guttata] Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Biological Process: defense response (GO:0006952);|Molecular Function: ADP binding (GO:0043531); -- -- TRINITY_DN30915_c4_g1_i18 1241.527203 1718.556882 764.4975244 0.444848543 -1.168613868 7.76E-39 5.98E-37 Down 20.37345 20.01785 19.95253 6.662403 7.647977 7.356208 XP_021642931.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Hevea brasiliensis] Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1 -- -- -- -- -- -- KOG1121 Tam3-transposase (Ac family) [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG4111T8J transposon protein Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: post-embryonic development (GO:0009791);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: protein dimerization activity (GO:0046983); "PF05699.13,PF14372.5,PF02892.14" hAT family C-terminal dimerisation region|Domain of unknown function (DUF4413)|BED zinc finger TRINITY_DN30917_c0_g2_i2 147.5837557 92.21684055 202.9506709 2.200798354 1.138026966 5.96E-08 6.80E-07 Up 4.853048 5.423686 3.42894 7.525039 8.318208 8.50172 CAC95126.1 gag-pol polyprotein [Populus deltoides] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN30919_c4_g2_i1 40.26268219 16.25490116 64.27046321 3.953912888 1.983281086 3.80E-06 3.31E-05 Up 1.816215 2.992763 3.994185 8.512257 9.931327 9.569107 XP_012857645.1 PREDICTED: putative late blight resistance protein homolog R1A-3 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30925_c0_g1_i2 35.62593465 71.25186931 0 0 #NAME? 5.67E-23 2.21E-21 Down 7.662738 6.770981 8.521032 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30925_c0_g2_i1 38.95030256 76.39401006 1.506595062 0.019721377 -5.664095912 2.60E-20 8.68E-19 Down 2.517506 3.371573 2.76634 0.07012471 0 0.06774954 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30925_c2_g1_i1 47.45497524 84.11967468 10.7902758 0.128272914 -2.96271153 2.72E-10 4.13E-09 Down 12.87933 16.01521 21.90038 0.8715181 2.223061 2.02237 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30925_c5_g2_i4 940.9950263 1332.223094 549.766959 0.41266884 -1.276943587 6.30E-36 4.36E-34 Down 156.708 167.6682 141.9032 55.5362 48.87585 50.70287 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30925_c5_g3_i1 533.4216861 934.1517365 132.6916358 0.142045056 -2.815579476 1.17E-97 2.84E-95 Down 90.87583 96.7131 91.18158 8.899506 10.34123 12.80854 XP_020537643.1 uncharacterized protein LOC110010215 [Jatropha curcas] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30925_c5_g4_i1 4.396658348 8.793316696 0 0 #NAME? 0.0139135 0.050224693 Down 0.2162819 1.525717 2.945162 1.96E-18 1.44E-44 5.80E-18 XP_021654023.1 uncharacterized protein LOC110645245 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30925_c5_g6_i1 36.09754741 68.07691982 4.118174993 0.060492969 -4.047088722 4.01E-07 4.08E-06 Down 8.80207 3.786537 8.976965 0.2892943 0.2906515 0.4741373 XP_012066659.1 uncharacterized protein LOC105629655 [Jatropha curcas] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30927_c3_g2_i1 39.60425588 54.58558367 24.6229281 0.451088482 -1.148517645 0.004787415 0.020439721 Down 11.37968 9.708961 12.51588 4.38689 2.984475 4.847402 EOY07779.1 Purine biosynthesis 4 [Theobroma cacao] Q9M8D3|PUR4_ARATH "Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g74260 PE=2 SV=3" tcc:TCM_022107 K01952 "purL, PFAS" phosphoribosylformylglycinamidine synthase ko00230 Purine metabolism KOG1907 Phosphoribosylformylglycinamidine synthase [F] METABOLISM Nucleotide transport and metabolism F COG0047 phosphoribosylformylglycinamidine synthase Molecular Function: phosphoribosylformylglycinamidine synthase activity (GO:0004642);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: 'de novo' IMP biosynthetic process (GO:0006189);|Biological Process: glutamine metabolic process (GO:0006541);|Cellular Component: chloroplast (GO:0009507);|Biological Process: pollen development (GO:0009555);|Cellular Component: chloroplast stroma (GO:0009570);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: microgametogenesis (GO:0055046); PF13507.5 CobB/CobQ-like glutamine amidotransferase domain TRINITY_DN30928_c1_g1_i1 49.04721149 70.02983616 28.06458683 0.400751856 -1.319218892 0.000513227 0.002890078 Down 10.17039 9.556735 8.355664 2.445464 4.340138 2.335082 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30935_c4_g1_i2 102.8666071 162.2542947 43.47891948 0.267967757 -1.899868672 0.015581845 0.055111944 Down 49.93157 18.19916 25.04263 8.276722 2.689606 9.243037 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30938_c0_g3_i1 10.48120404 0 20.96240809 Inf Inf 2.59E-07 2.71E-06 Up 0 0 9.30E-50 4.043605 4.111888 1.456274 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30942_c2_g4_i2 53.77934592 75.58875601 31.96993583 0.422945654 -1.241455798 0.000519426 0.002922084 Down 13.8962 10.39966 11.23237 4.196184 3.794288 4.171024 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30943_c1_g2_i1 101.020019 140.7722169 61.26782098 0.435226654 -1.200161182 0.00045244 0.002583348 Down 22.44666 13.26048 23.37421 6.380201 7.409978 6.854944 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30943_c3_g1_i2 77.88917128 108.9839798 46.79436276 0.429369187 -1.219709434 5.53E-05 0.000388196 Down 15.21609 14.35015 10.29049 3.367354 5.606906 4.863031 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30949_c1_g3_i1 13.75980991 25.70844365 1.811176178 0.070450635 -3.827243481 0.003053317 0.013875184 Down 4.507554 7.655947 1.752563 1.38E-48 0.7600704 3.57E-38 AAK29467.1 polyprotein-like [Solanum chilense] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN30950_c3_g1_i3 114.9553886 207.5737522 22.33702508 0.107610066 -3.216115065 8.97E-31 5.18E-29 Down 26.98904 28.58464 26.46188 2.906262 1.692684 2.457736 XP_019172859.1 PREDICTED: uncharacterized protein LOC109168299 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF13963.5 Transposase-associated domain TRINITY_DN30950_c3_g2_i2 186.3379035 313.7397452 58.93606175 0.187850161 -2.41234574 2.49E-06 2.24E-05 Down 18.13519 11.8927 9.627968 1.71278 1.847374 2.476146 XP_019161862.1 PREDICTED: uncharacterized protein LOC109158407 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41104TD "CACTA, En Spm sub-class" -- "PF02992.13,PF13960.5" Transposase family tnp2|Domain of unknown function (DUF4218) TRINITY_DN30956_c5_g1_i2 61.0307712 94.25076585 27.81077655 0.295072155 -1.760860312 4.50E-05 0.000321777 Down 9.306812 12.50112 8.443535 2.095642 4.370497 0.686954 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30958_c1_g1_i2 181.9396593 278.2564051 85.62291354 0.307712283 -1.700346064 2.32E-14 5.07E-13 Down 23.68692 20.33644 21.04128 8.16234 3.810209 4.139586 KYP71432.1 "Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan]" Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN30958_c1_g2_i2 313.1911402 509.532368 116.8499125 0.229327752 -2.124517143 1.31E-39 1.03E-37 Down 23.70126 24.91995 21.95307 4.365718 3.978676 4.73518 KYP38573.1 "Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan]" P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); "PF07727.13,PF00665.25" Reverse transcriptase (RNA-dependent DNA polymerase)|Integrase core domain TRINITY_DN30958_c2_g1_i7 318.9630894 513.5156712 124.4105076 0.242272076 -2.045299966 3.10E-38 2.35E-36 Down 25.0128 23.43072 24.92788 4.833809 3.427632 6.086684 GAU35153.1 hypothetical protein TSUD_217860 [Trifolium subterraneum] P25601|YCH5_YEAST Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5B PE=5 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: peptidase activity (GO:0008233);|Biological Process: transposition, RNA-mediated (GO:0032197);" "PF14223.5,PF03732.16" gag-polypeptide of LTR copia-type|Retrotransposon gag protein TRINITY_DN30958_c2_g3_i1 69.49562831 109.6864882 29.30476843 0.267168444 -1.904178475 3.00E-09 4.04E-08 Down 22.72521 17.92128 20.66296 4.203118 2.343187 6.995475 XP_024923184.1 uncharacterized protein LOC112489224 [Ziziphus jujuba] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF13976.5 GAG-pre-integrase domain TRINITY_DN30958_c2_g5_i1 50.15170435 97.98867862 2.31473008 0.023622424 -5.403699197 2.15E-12 4.03E-11 Down 8.290337 12.62427 16.88455 5.51E-07 1.61E-21 0.7904291 XP_012835686.1 PREDICTED: uncharacterized protein LOC105956382 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30959_c2_g2_i2 284.1708767 411.7430668 156.5986866 0.380331083 -1.394672244 0.000711777 0.003860178 Down 70.57442 54.93823 52.74118 23.88407 2.539934 28.67791 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30959_c2_g3_i3 371.4397453 548.6430145 194.236476 0.35403071 -1.498053583 0.000215707 0.001331827 Down 66.59678 74.27356 115.9212 30.32198 20.33585 22.776 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30959_c2_g4_i1 43.37098564 27.05949527 59.682476 2.205601967 1.141172459 0.003748599 0.016558623 Up 2.202989 2.112661 2.420231 3.219054 4.93446 3.70855 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30960_c0_g1_i1 365.8405671 731.6811341 0 0 #NAME? 6.48E-181 3.97E-178 Down 60.71666 52.59476 51.39118 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30960_c11_g2_i1 191.75772 124.7953734 258.7200666 2.073154313 1.051827506 2.50E-08 3.00E-07 Up 24.31991 29.09024 24.78154 38.57113 48.91333 43.12307 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30962_c2_g1_i8 85.93238752 52.88122813 118.9835469 2.250014818 1.169934503 0.005152022 0.021730693 Up 11.90518 5.062712 4.99874 12.8881 17.08852 10.01338 XP_012833553.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Erythranthe guttata] Q1MX30|XA21_ORYSI Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: positive regulation of defense response (GO:0031349);|Biological Process: protein autophosphorylation (GO:0046777);|Biological Process: positive regulation of defense response to bacterium (GO:1900426); "PF00069.24,PF07714.16" Protein kinase domain|Protein tyrosine kinase TRINITY_DN30962_c4_g5_i1 58.63421214 37.71918446 79.54923982 2.108986209 1.076549661 0.002233715 0.010578512 Up 5.289679 2.572422 7.411238 8.07552 8.787709 9.046687 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF13855.5,PF00560.32,PF12799.6" Leucine rich repeat|Leucine Rich Repeat|Leucine Rich repeats (2 copies) TRINITY_DN30963_c3_g2_i6 111.0063457 162.4422183 59.57047306 0.366717924 -1.447257313 0.002269933 0.010725417 Down 14.83155 10.35348 9.584335 1.922034 6.275276 2.08282 PKU77410.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN30964_c2_g1_i1 562.1759584 148.4828536 975.8690633 6.572267704 2.716391246 6.04E-56 7.72E-54 Up 1.589309 1.892938 1.875161 10.12765 9.807057 8.42882 XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=3 SV=2 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" "PF00665.25,PF00078.26,PF13650.5" Integrase core domain|Reverse transcriptase (RNA-dependent DNA polymerase)|Aspartyl protease TRINITY_DN30966_c1_g3_i4 53.51039974 76.69837536 30.32242413 0.395346368 -1.338810924 0.003526821 0.015690777 Down 8.908943 9.237875 9.92172 2.922953 0.2374782 5.900138 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30966_c2_g2_i1 39.99858151 69.99110982 10.00605321 0.142961774 -2.806298655 4.53E-10 6.72E-09 Down 3.614654 3.49552 4.842909 0.7911274 0.2369021 0.3440224 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30966_c2_g3_i1 346.8891131 217.5390414 476.2391848 2.189212483 1.130411988 2.93E-07 3.04E-06 Up 32.79609 22.63304 16.51647 47.36022 38.36359 41.13398 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30966_c2_g4_i1 313.6690118 158.5382777 468.799746 2.957012986 1.564140579 3.89E-24 1.62E-22 Up 21.80351 14.33332 17.96841 45.13807 38.10256 45.87914 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30966_c2_g5_i1 45.25115772 85.94597193 4.556343511 0.053014044 -4.237481602 7.43E-08 8.35E-07 Down 4.227359 8.3491 4.440128 0.223504 1.55E-11 0.4767325 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30967_c1_g2_i1 99.34593517 150.7316926 47.9601777 0.31818244 -1.652073879 8.74E-10 1.25E-08 Down 3.056758 3.834495 2.856795 0.8690044 0.7744062 0.8611907 KMS98576.1 hypothetical protein BVRB_4g092630 [Beta vulgaris subsp. vulgaris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30967_c2_g1_i3 525.5178612 115.5674643 935.4682582 8.094564191 3.016953408 1.94E-110 5.72E-108 Up 1.487356 1.408686 1.608867 9.58677 10.09846 9.712928 XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" "PF00078.26,PF03732.16" Reverse transcriptase (RNA-dependent DNA polymerase)|Retrotransposon gag protein TRINITY_DN30972_c0_g1_i1 5.693472859 11.02471048 0.362235236 0.032856666 -4.927670072 0.001876184 0.009096945 Down 0.9689079 1.281308 1.634874 0 0.1475772 0 XP_020554353.1 lysine histidine transporter 1-like isoform X2 [Sesamum indicum] Q9FKS8|LHT1_ARATH Lysine histidine transporter 1 OS=Arabidopsis thaliana OX=3702 GN=LHT1 PE=1 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Molecular Function: symporter activity (GO:0015293);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: amino acid import (GO:0043090);|Biological Process: response to karrikin (GO:0080167); PF01490.17 Transmembrane amino acid transporter protein TRINITY_DN30975_c0_g1_i1 6.220606347 1.601014041 10.84019865 6.77083297 2.75933333 0.015833189 0.055822598 Up 0.4563458 0.2212711 0 1.304295 0.8822808 1.65702 PIN03818.1 putative Ca2+-dependent phospholipid-binding protein [Handroanthus impetiginosus] Q0JHU5|ERG1_ORYSJ Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG1 PE=1 SV=1 -- -- -- -- -- -- KOG1030 Predicted Ca2+-dependent phospholipid-binding protein [R] POORLY CHARACTERIZED General function prediction only S COG5038 Domain-Containing protein Molecular Function: calcium-dependent phospholipid binding (GO:0005544);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952); PF00168.29 C2 domain TRINITY_DN30982_c0_g1_i1 8.942030111 15.33259173 2.551468495 0.166408168 -2.587201849 0.008511646 0.033322047 Down 4.196927 1.168594 3.269423 0.5856427 0.5849613 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30992_c0_g1_i1 12.29422364 3.881416082 20.70703119 5.334916627 2.415465725 0.002829854 0.013005523 Up 0.4347113 0.4223411 1.032948 2.095568 4.28487 2.511668 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN30993_c0_g1_i1 13.98322355 0.558128722 27.40831837 49.10752182 5.617872114 2.01E-08 2.44E-07 Up 0 0.1137009 0.08785054 1.91386 2.129696 1.590702 ACL92318.1 RpS4-PA [synthetic construct] Q9P4W9|RS4C_SCHPO 40S ribosomal protein S4-C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rps403 PE=1 SV=1 cne:CNA06200 K02987 "RP-S4e, RPS4" small subunit ribosomal protein S4e ko03010 Ribosome KOG0378 40S ribosomal protein S4 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1471 (ribosomal) protein Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); "PF00900.19,PF16121.4,PF08071.11,PF00467.28,PF01479.24" Ribosomal family S4e|40S ribosomal protein S4 C-terminus|RS4NT (NUC023) domain|KOW motif|S4 domain TRINITY_DN30996_c0_g1_i1 21.22376997 0 42.44753993 Inf Inf 2.84E-15 6.71E-14 Up 0 0 0 1.555465 1.981438 2.227558 XP_019190740.1 PREDICTED: uncharacterized protein LOC109185213 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31000_c0_g1_i1 32.13418426 64.26836852 0 0 #NAME? 1.63E-11 2.83E-10 Down 4.12217 10.28259 9.102844 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31001_c0_g1_i1 6.049640582 12.09928116 0 0 #NAME? 0.000235552 0.001438311 Down 1.072054 1.427698 0.8820754 0 0 0 AAX29657.1 "DEAD box polypeptide 5, partial [synthetic construct]" Q4X195|DBP2_ASPFU ATP-dependent RNA helicase dbp2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=dbp2 PE=3 SV=2 afm:AFUA_2G10750 K12823 "DDX5, DBP2" ATP-dependent RNA helicase DDX5/DBP2 ko03040 Spliceosome KOG0331 ATP-dependent RNA helicase [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification L COG0513 purine NTP-dependent helicase activity "Biological Process: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: helicase activity (GO:0004386);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: rRNA processing (GO:0006364);" PF00270.28 DEAD/DEAH box helicase TRINITY_DN31004_c0_g1_i1 24.71366623 0.325611563 49.10172089 150.7984558 7.236477846 2.23E-16 5.71E-15 Up 0.1438826 0 0 3.736929 3.771585 4.179066 ACL87031.1 "Mp20-PA, partial [synthetic construct]" O14185|STG1_SCHPO Transgelin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=stg1 PE=4 SV=1 nce:NCER_101203 K20526 TAGLN transgelin -- -- KOG2046 Calponin [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5199 Calponin Biological Process: mitotic cytokinesis (GO:0000281);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: actin cytoskeleton organization (GO:0030036);|Cellular Component: actin cortical patch (GO:0030479);|Cellular Component: cell division site (GO:0032153);|Molecular Function: actin filament binding (GO:0051015);|Cellular Component: cell tip (GO:0051286);|Biological Process: actin crosslink formation (GO:0051764); "PF00307.30,PF00402.17" Calponin homology (CH) domain|Calponin family repeat TRINITY_DN31008_c0_g1_i1 16.1350389 9.018950064 23.25112774 2.578030433 1.366269294 0.035283334 0.107483817 Up 2.365595 0.3860094 1.508107 3.88595 3.23608 1.833259 PIN19646.1 H+/oligopeptide symporter [Handroanthus impetiginosus] Q9SX20|PTR18_ARATH Protein NRT1/ PTR FAMILY 3.1 OS=Arabidopsis thaliana OX=3702 GN=NPF3.1 PE=2 SV=1 sind:105155926 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Cellular Component: plasma membrane (GO:0005886);|Biological Process: gibberellic acid homeostasis (GO:0010336);|Molecular Function: peptide:proton symporter activity (GO:0015333);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oligopeptide transmembrane transporter activity (GO:0035673);|Biological Process: nitrate assimilation (GO:0042128);|Cellular Component: intracellular vesicle (GO:0097708);|Molecular Function: peptide transmembrane transporter activity (GO:1904680); -- -- TRINITY_DN31009_c0_g1_i1 53.81971746 3.587489881 104.051945 29.0041083 4.858185361 3.19E-26 1.49E-24 Up 0.07114503 0.1693958 0.053278 2.445651 2.379029 2.460004 SJX44016.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" Q01877|HSP71_PUCGR Heat shock protein HSS1 OS=Puccinia graminis OX=5297 GN=HSS1 PE=3 SV=1 hir:HETIRDRAFT_407686 K03283 HSPA1_8 heat shock 70kDa protein 1/2/6/8 ko04141|ko03040|ko04144 Protein processing in endoplasmic reticulum|Spliceosome|Endocytosis KOG0101 "Molecular chaperones HSP70/HSC70, HSP70 superfamily" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0443 Heat shock protein Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737); "PF00012.19,PF06723.12" Hsp70 protein|MreB/Mbl protein TRINITY_DN3100_c0_g1_i1 13.27816568 22.16731694 4.389014417 0.197994842 -2.336465247 0.003282325 0.014750476 Down 5.074551 2.730753 2.300805 1.054808 0.5252612 2.54E-09 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31010_c0_g1_i1 22.56256542 3.432986436 41.6921444 12.14457009 3.602239516 7.31E-09 9.37E-08 Up 0 0.7473062 0 2.782048 1.984752 2.615751 PKK74999.1 hypothetical protein RhiirC2_737617 [Rhizophagus irregularis] -- -- -- -- -- -- -- -- KOG4387 Ornithine decarboxylase antizyme [E] METABOLISM Amino acid transport and metabolism S ENOG4112791 Ornithine decarboxylase antizyme -- -- -- TRINITY_DN31011_c0_g1_i1 14.01722992 7.644655669 20.38980418 2.667197198 1.415324494 0.04095303 0.120885739 Up 0.5649482 3.300364 0.438855 4.288868 2.437837 2.527621 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31015_c0_g1_i1 9.424312802 2.207029917 16.64159569 7.540267379 2.914615683 0.002484422 0.011601513 Up 0.4496941 0 0.5058096 2.501447 1.853812 1.305644 AOQ03741.1 "RpL23-RA, partial [synthetic construct]" Q07760|RL23_TOBAC 60S ribosomal protein L23 OS=Nicotiana tabacum OX=4097 GN=RPL23 PE=2 SV=1 ppp:PHYPADRAFT_215314 K02894 "RP-L23e, RPL23" large subunit ribosomal protein L23e ko03010 Ribosome KOG0901 60S ribosomal protein L14/L17/L23 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0093 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF00238.18 Ribosomal protein L14p/L23e TRINITY_DN31021_c0_g1_i1 12.27757168 1.548485297 23.00665806 14.85752438 3.893121843 1.01E-05 8.15E-05 Up 0.3046788 0 0.07715498 1.845733 1.140416 1.240864 ACL88945.1 Rack1-PA [synthetic construct] Q01369|GBLP_NEUCR Guanine nucleotide-binding protein subunit beta-like protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cpc-2 PE=3 SV=1 -- -- -- -- -- -- KOG0279 G protein beta subunit-like protein [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XQGZ guanine nucleotidebinding protein Biological Process: positive regulation of protein phosphorylation (GO:0001934);|Molecular Function: protein kinase C binding (GO:0005080);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Molecular Function: enzyme binding (GO:0019899);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Molecular Function: ribosome binding (GO:0043022);|Biological Process: rescue of stalled ribosome (GO:0072344); "PF00400.31,PF12894.6" "WD domain, G-beta repeat|Anaphase-promoting complex subunit 4 WD40 domain" TRINITY_DN31025_c0_g1_i1 89.76443236 7.668616658 171.8602481 22.41085397 4.486125719 6.18E-39 4.78E-37 Up 0.3497832 0.1832889 0.2154621 4.541142 4.193524 4.823757 PIN25495.1 Alpha-isopropylmalate synthase/homocitrate synthase [Handroanthus impetiginosus] O04973|LEU1A_SOLPN 2-isopropylmalate synthase A OS=Solanum pennellii OX=28526 GN=IPMSA PE=2 SV=1 sind:105158757 K01649 leuA 2-isopropylmalate synthase ko00620|ko00290 "Pyruvate metabolism|Valine, leucine and isoleucine biosynthesis" KOG2367 Alpha-isopropylmalate synthase/homocitrate synthase [E] METABOLISM Amino acid transport and metabolism E COG0119 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (By similarity) Molecular Function: 2-isopropylmalate synthase activity (GO:0003852);|Biological Process: leucine biosynthetic process (GO:0009098); "PF00682.18,PF08502.9" HMGL-like|LeuA allosteric (dimerisation) domain TRINITY_DN31026_c0_g1_i1 2.985771381 0 5.971542761 Inf Inf 0.034310832 0.105113827 Up 0 0 0 1.992411 0 1.063137 XP_005705644.1 60S ribosomal protein L13e [Galdieria sulphuraria] O74175|RL13_SCHPO 60S ribosomal protein L13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl13 PE=1 SV=1 gsl:Gasu_35130 K02873 "RP-L13e, RPL13" large subunit ribosomal protein L13e ko03010 Ribosome KOG3295 60S Ribosomal protein L13 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG4352 cytoplasmic translation Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF01294.17 Ribosomal protein L13e TRINITY_DN31028_c0_g1_i1 27.72788049 38.08196355 17.37379742 0.456221156 -1.132194747 0.026388989 0.08488346 Down 1.802536 1.317432 1.168313 0.553797 0.6279834 0.3834537 AAP68990.1 4-coumarate:coenzyme A ligase 1 [Salvia miltiorrhiza] O24146|4CL2_TOBAC 4-coumarate--CoA ligase 2 OS=Nicotiana tabacum OX=4097 GN=4CL2 PE=1 SV=1 sind:105155681 K01904 4CL 4-coumarate--CoA ligase ko00940|ko00130|ko00360 Phenylpropanoid biosynthesis|Ubiquinone and other terpenoid-quinone biosynthesis|Phenylalanine metabolism KOG1176 Acyl-CoA synthetase [I] METABOLISM Lipid transport and metabolism IQ COG0318 Amp-dependent synthetase and ligase Molecular Function: ATP binding (GO:0005524);|Biological Process: phenylpropanoid metabolic process (GO:0009698);|Molecular Function: 4-coumarate-CoA ligase activity (GO:0016207); "PF00501.27,PF13193.5" AMP-binding enzyme|AMP-binding enzyme C-terminal domain TRINITY_DN31033_c0_g1_i1 20.79928671 0.738117137 40.86045627 55.35768543 5.790711718 4.84E-12 8.80E-11 Up 0 0 0.1263862 2.598354 1.822358 2.047486 ACL85053.1 "CAH1-PA, partial [synthetic construct]" Q9FM99|ATCA8_ARATH Alpha carbonic anhydrase 8 OS=Arabidopsis thaliana OX=3702 GN=ACA8 PE=3 SV=3 aly:ARALYDRAFT_320571 K01674 cah carbonic anhydrase ko00910 Nitrogen metabolism KOG0382 Carbonic anhydrase [R] POORLY CHARACTERIZED General function prediction only P COG3338 Carbonic anhydrase Molecular Function: carbonate dehydratase activity (GO:0004089);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: chloroplast stroma (GO:0009570); PF00194.20 Eukaryotic-type carbonic anhydrase TRINITY_DN31036_c0_g1_i1 5.578892491 0 11.15778498 Inf Inf 0.000193535 0.001206582 Up 0 0 0 0.483883 1.029721 0.9218885 AOQ15078.1 CG45076-PE [synthetic construct] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4112AMP NA -- -- -- TRINITY_DN31040_c0_g1_i1 4.800814109 8.853604637 0.748023582 0.084488026 -3.565109292 0.016558494 0.057885784 Down 1.332804 0.6486643 2.209729 0 0.2040617 0.2161419 XP_011081693.1 cytosolic sulfotransferase 15-like [Sesamum indicum] Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15 OS=Arabidopsis thaliana OX=3702 GN=SOT15 PE=1 SV=1 sind:105164651 K01025 E2.8.2.- sulfotransferase -- -- KOG1584 Sulfotransferase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111H56 Sulfotransferase Cellular Component: cytoplasm (GO:0005737);|Biological Process: jasmonic acid metabolic process (GO:0009694);|Biological Process: response to jasmonic acid (GO:0009753);|Molecular Function: hydroxyjasmonate sulfotransferase activity (GO:0080131); PF00685.26 Sulfotransferase domain TRINITY_DN31042_c0_g1_i1 9.957539887 19.91507977 0 0 #NAME? 8.78E-07 8.51E-06 Down 3.380709 1.921372 1.886207 0 0 0 XP_023912506.1 uncharacterized protein LOC112024101 [Quercus suber] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF14111.5 Domain of unknown function (DUF4283) TRINITY_DN31043_c0_g1_i1 10.85313385 17.24413664 4.462131066 0.258762219 -1.950301104 0.021237702 0.071105104 Down 4.110075 2.873082 3.203558 0.6615815 0.6681896 0.6527293 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31047_c0_g1_i1 8.294748825 0.738117137 15.85138051 21.47542676 4.424614896 0.00021717 0.001339041 Up 0 0 0.2777563 1.543703 2.716744 1.149833 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31049_c0_g1_i1 10.66939265 21.3387853 0 0 #NAME? 2.85E-07 2.96E-06 Down 3.543074 1.671947 2.510797 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31051_c0_g1_i1 3.572426602 7.144853204 0 0 #NAME? 0.007859151 0.031146363 Down 1.571394 0.4356023 1.392333 0 0 0 ABM84269.1 Enah/Vasp-like [synthetic construct] -- -- -- -- -- -- -- -- KOG4590 "Signal transduction protein Enabled, contains WH1 domain" [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms U ENOG410YM7V Enah Vasp-like -- PF00568.22 WH1 domain TRINITY_DN31057_c0_g1_i1 9.980609214 0.984156182 18.97706225 19.28257179 4.269225577 6.76E-05 0.000465022 Up 0 0 0.3360124 1.662082 2.038745 2.212027 ACL92082.1 RpS19a-PA [synthetic construct] P40978|RS19_ORYSJ 40S ribosomal protein S19 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS19A PE=2 SV=1 sbi:SORBI_07g025000 K02966 "RP-S19e, RPS19" small subunit ribosomal protein S19e ko03010 Ribosome KOG3411 40S ribosomal protein S19 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2238 Ribosomal protein Biological Process: ribosomal small subunit assembly (GO:0000028);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF01090.18 Ribosomal protein S19e TRINITY_DN31058_c0_g1_i1 7.363848476 14.72769695 0 0 #NAME? 2.97E-05 0.000220278 Down 1.732845 1.011361 2.128972 0 0 0 BAN84686.1 Large protein [Rabies viral vector pHEP5.0-CVSG-mRFP] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00946.18 Mononegavirales RNA dependent RNA polymerase TRINITY_DN3105_c0_g1_i1 3.975491328 7.950982656 0 0 #NAME? 0.016982967 0.059064343 Down 1.61654 1.958906 0 0 0 0 XP_003547929.1 "ferredoxin--NADP reductase, leaf isozyme, chloroplastic [Glycine max]" Q9FKW6|FNRL1_ARATH "Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LFNR1 PE=1 SV=1" gmx:100793840 K02641 petH ferredoxin--NADP+ reductase ko00195 Photosynthesis KOG1158 NADP/FAD dependent oxidoreductase [C] METABOLISM Energy production and conversion P COG0369 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component (By similarity) "Molecular Function: ferredoxin-NADP+ reductase activity (GO:0004324);|Molecular Function: poly(U) RNA binding (GO:0008266);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: thylakoid (GO:0009579);|Biological Process: photosynthetic electron transport chain (GO:0009767);|Cellular Component: chloroplast envelope (GO:0009941);|Molecular Function: protein domain specific binding (GO:0019904);|Cellular Component: thylakoid lumen (GO:0031977);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (GO:0045156);|Molecular Function: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity (GO:0045157);|Cellular Component: apoplast (GO:0048046);|Cellular Component: chloroplast thylakoid membrane protein complex (GO:0098807);" PF00175.20 Oxidoreductase NAD-binding domain TRINITY_DN31060_c0_g1_i1 17.5266429 35.05328579 0 0 #NAME? 1.12E-11 1.98E-10 Down 3.584805 5.092964 5.611569 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31062_c0_g1_i1 27.38809897 36.84400913 17.93218881 0.486705688 -1.03887846 0.03951951 0.11744086 Down 2.793671 2.966315 2.157309 0.8823011 0.8785023 1.370501 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31063_c0_g1_i1 7.512705871 1.714951826 13.31045992 7.761419136 2.956320466 0.006213837 0.025489311 Up 0.6226129 0 0.4918644 2.031281 2.711111 1.717384 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31068_c0_g1_i1 13.34733897 0.738117137 25.9565608 35.16590999 5.136105645 2.17E-07 2.29E-06 Up 0 0 0.196683 1.734509 2.56633 2.011609 ACL89049.1 RpL19-PA [synthetic construct] Q9SRX2|RL191_ARATH 60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1 thj:104820284 K02885 "RP-L19e, RPL19" large subunit ribosomal protein L19e ko03010 Ribosome KOG1696 60s ribosomal protein L19 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2147 ribosomal protein L19 Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: polysomal ribosome (GO:0042788); PF01280.19 Ribosomal protein L19e TRINITY_DN31069_c0_g1_i1 14.69202582 26.03745334 3.3465983 0.12853017 -2.959821052 0.000100832 0.000668578 Down 2.730567 2.932038 4.22278 0.3423042 0.3475297 0.3484566 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31072_c0_g1_i1 8.636753152 0.624179352 16.64932695 26.673947 4.737359414 4.77E-05 0.00033921 Up 0 0.3316265 0 2.14802 2.096436 1.522828 AOQ13777.1 RpS15-PB [synthetic construct] Q945U1|RS15_ELAOL 40S ribosomal protein S15 OS=Elaeis oleifera OX=80265 GN=RPS15 PE=2 SV=1 pda:103716570 K02958 "RP-S15e, RPS15" small subunit ribosomal protein S15e ko03010 Ribosome KOG0898 40S ribosomal protein S15 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0185 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (By similarity) Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: small ribosomal subunit (GO:0015935); PF00203.20 Ribosomal protein S19 TRINITY_DN31073_c0_g1_i1 2.701428802 5.402857605 0 0 #NAME? 0.027803859 0.088661791 Down 0.9227807 0.8837063 1.211107 0 0 0 BAI45581.1 "protein tyrosine phosphatase, receptor type, C, partial [synthetic construct]" O82656|PTP1_ARATH Protein-tyrosine-phosphatase PTP1 OS=Arabidopsis thaliana OX=3702 GN=PTP1 PE=1 SV=1 bfu:BC1G_08376 K01104 E3.1.3.48 protein-tyrosine phosphatase -- -- KOG4228 Protein tyrosine phosphatase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG5599 protein tyrosine phosphatase Molecular Function: protein tyrosine phosphatase activity (GO:0004725);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: defense response (GO:0006952);|Molecular Function: kinase binding (GO:0019900);|Biological Process: negative regulation of defense response (GO:0031348);|Molecular Function: MAP kinase tyrosine phosphatase activity (GO:0033550);|Biological Process: intracellular signal transduction (GO:0035556); PF00102.26 Protein-tyrosine phosphatase TRINITY_DN31076_c0_g1_i1 3.703559586 0 7.407119173 Inf Inf 0.003853515 0.016943296 Up 0 0 0 0.6499726 1.628464 1.063618 ACL85122.1 "Pglym78-PA, partial [synthetic construct]" P00950|PMG1_YEAST Phosphoglycerate mutase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GPM1 PE=1 SV=3 zro:ZYRO0C10824g K01834 "PGAM, gpmA" "2,3-bisphosphoglycerate-dependent phosphoglycerate mutase" ko00260|ko00010 "Glycine, serine and threonine metabolism|Glycolysis / Gluconeogenesis" KOG0235 Phosphoglycerate mutase [G] METABOLISM Carbohydrate transport and metabolism G COG0588 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (By similarity) Molecular Function: phosphoglycerate mutase activity (GO:0004619);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial outer membrane (GO:0005741);|Cellular Component: mitochondrial intermembrane space (GO:0005758);|Cellular Component: cytosol (GO:0005829);|Biological Process: gluconeogenesis (GO:0006094);|Biological Process: glycolytic process (GO:0006096); -- -- TRINITY_DN31080_c0_g1_i1 23.82247899 46.9204875 0.724470471 0.015440387 -6.017147305 3.12E-13 6.29E-12 Down 2.674674 2.385603 2.357009 0 0.0707052 0 AAX29863.1 "ribosomal protein L3, partial [synthetic construct]" Q8NKF4|RL3_ASPFU 60S ribosomal protein L3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=rpl3 PE=1 SV=2 fme:FOMMEDRAFT_21857 K02925 "RP-L3e, RPL3" large subunit ribosomal protein L3e ko03010 Ribosome KOG0746 60S ribosomal protein L3 and related proteins [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0087 "One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity)" Biological Process: ribosomal large subunit assembly (GO:0000027);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF00297.21 Ribosomal protein L3 TRINITY_DN31081_c0_g1_i1 7.28464308 2.207029917 12.36225624 5.601308868 2.485763984 0.02295955 0.075758005 Up 0.4307359 0 0.6517891 0.8497225 1.686129 2.676822 XP_017259115.1 PREDICTED: hypersensitive-induced response protein 1-like [Daucus carota subsp. sativus] Q5GI04|HIR1_CAPAN Hypersensitive-induced reaction 1 protein OS=Capsicum annuum OX=4072 GN=HIR1 PE=1 SV=1 -- -- -- -- -- -- KOG2620 Prohibitins and stomatins of the PID superfamily [C] METABOLISM Energy production and conversion O COG0330 Band 7 protein -- -- -- TRINITY_DN31082_c0_g1_i1 14.23139756 28.46279513 0 0 #NAME? 6.65E-09 8.57E-08 Down 3.396195 1.486857 2.203826 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31083_c0_g1_i1 60.2740915 120.548183 0 0 #NAME? 1.14E-28 6.04E-27 Down 7.410818 10.90894 7.184024 0 0 0 PON91412.1 "Zinc finger, CCHC-type, partial [Trema orientale]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YMEY NA -- PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN31084_c0_g1_i1 6.012175118 12.02435024 0 0 #NAME? 0.000265107 0.001602609 Down 1.311731 2.675531 0.8735998 0 0 0 XP_010531643.1 PREDICTED: uncharacterized protein LOC104807900 [Tarenaya hassleriana] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN31088_c0_g1_i1 6.294488035 12.22674084 0.362235236 0.029626475 -5.076969192 0.000932044 0.004903035 Down 1.155943 1.101038 1.065764 0 0.0492857 0 AIC63134.1 "PTMA, partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZA5I "prothymosin, alpha" -- PF03247.13 Prothymosin/parathymosin family TRINITY_DN31089_c0_g1_i1 19.2043307 38.40866139 0 0 #NAME? 2.54E-09 3.46E-08 Down 5.082055 10.93649 5.960525 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31094_c0_g1_i1 19.71770728 39.43541457 0 0 #NAME? 3.26E-07 3.36E-06 Down 7.713207 2.592986 4.530215 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3109_c0_g1_i1 9.102447733 14.84247532 3.362420146 0.22654039 -2.142159803 0.044299564 0.128622881 Down 3.76534 2.562537 0.8657917 0.7880486 0 0.3942568 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31100_c0_g1_i1 21.68299569 0.738117137 42.62787424 57.75218067 5.851803517 2.90E-10 4.38E-09 Up 0 0 0.2213449 2.005932 2.97903 4.329688 ABM82710.1 ribosomal protein S5 [synthetic construct] O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1 mtr:MTR_1g054310 K02989 "RP-S5e, RPS5" small subunit ribosomal protein S5e ko03010 Ribosome KOG3291 Ribosomal protein S7 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0049 "One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (By similarity)" Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: small ribosomal subunit (GO:0015935); PF00177.20 Ribosomal protein S7p/S5e TRINITY_DN31107_c0_g1_i1 5.335206121 0 10.67041224 Inf Inf 0.00230405 0.010864438 Up 0 0 0 2.325969 1.045341 0.4481719 XP_012836563.1 PREDICTED: putative late blight resistance protein homolog R1A-10 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31108_c0_g1_i1 46.66924842 27.24876687 66.08972997 2.425420948 1.278235158 0.000650222 0.003563087 Up 0.6312739 0.8907155 0.6156432 1.383448 1.45104 1.370452 XP_012844644.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Erythranthe guttata] Q6JN46|EIX2_SOLLC Receptor-like protein EIX2 OS=Solanum lycopersicum OX=4081 GN=EIX2 PE=1 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF13855.5,PF12799.6,PF00560.32,PF08263.11" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine rich repeat N-terminal domain TRINITY_DN31109_c0_g1_i1 8.140972469 16.28194494 0 0 #NAME? 9.14E-06 7.45E-05 Down 1.712248 2.243669 3.263868 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31113_c0_g1_i1 10.06163581 15.70297284 4.420298793 0.281494392 -1.828821914 0.035201375 0.107313365 Down 1.668574 1.822242 2.244293 0.5480124 0.5554724 0.2647363 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31114_c0_g1_i1 3.508696766 7.017393532 0 0 #NAME? 0.009036532 0.035032477 Down 1.355775 0.8772902 1.046808 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31115_c0_g1_i1 11.77325217 20.60643086 2.940073475 0.142677473 -2.809170529 0.001075475 0.005570408 Down 4.16247 3.721324 3.936251 1.425229 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31117_c0_g1_i1 7.785481093 14.07491502 1.496047164 0.106291737 -3.233898648 0.003191677 0.014407298 Down 1.066187 1.858191 2.260696 0 0.189018 0.20596 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31118_c0_g1_i1 8.423803007 16.48009683 0.367509184 0.022300184 -5.486800604 4.84E-05 0.000344096 Down 1.750013 2.604595 2.85566 0.1284549 0 0 CAL38254.1 "hypothetical protein, partial [synthetic construct]" Q9SS17|RS241_ARATH 40S ribosomal protein S24-1 OS=Arabidopsis thaliana OX=3702 GN=RPS24A PE=2 SV=1 sbi:SORBI_04g008130 K02974 "RP-S24e, RPS24" small subunit ribosomal protein S24e ko03010 Ribosome KOG3424 40S ribosomal protein S24 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2004 40S ribosomal protein S24 Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translation (GO:0006412);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Cellular Component: polysomal ribosome (GO:0042788); PF01282.18 Ribosomal protein S24e TRINITY_DN31119_c0_g1_i1 61.45922081 0 122.9184416 Inf Inf 3.58E-38 2.69E-36 Up 0 0 0 20.34191 17.44636 13.70022 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31128_c0_g1_i1 14.52144944 0.883740284 28.15915859 31.86361319 4.993837966 4.33E-08 5.03E-07 Up 0.1613213 0.1531695 0.1203436 3.098417 2.633984 2.15288 ACL92242.1 RpS27A-PA [synthetic construct] P59271|R27AA_ARATH Ubiquitin-40S ribosomal protein S27a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS27AA PE=2 SV=2 cthr:CTHT_0018840 K02977 "RP-S27Ae, RPS27A" small subunit ribosomal protein S27Ae ko03010 Ribosome KOG0004 Ubiquitin/40S ribosomal protein S27a fusion [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " O COG5272 ubiquitin Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: modification-dependent protein catabolic process (GO:0019941);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Molecular Function: protein tag (GO:0031386);|Molecular Function: ubiquitin protein ligase binding (GO:0031625);|Molecular Function: metal ion binding (GO:0046872); "PF00240.22,PF01599.18,PF11976.7" Ubiquitin family|Ribosomal protein S27a|Ubiquitin-2 like Rad60 SUMO-like TRINITY_DN31142_c0_g1_i1 4.06836688 8.13673376 0 0 #NAME? 0.035764993 0.108675765 Down 0.4496654 2.608598 0.5240299 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31143_c0_g1_i1 8.167883473 14.15180763 2.183959311 0.1543237 -2.69596846 0.010413626 0.039362623 Down 1.849914 2.992249 1.661101 0.2377193 0.4814387 0 BAE72878.1 flavanone 3-hydroxylase [Glandularia x hybrida] Q05963|FL3H_CALCH "Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis OX=13379 GN=FHT PE=2 SV=1" nnu:104588723 K00475 E1.14.11.9 naringenin 3-dioxygenase ko00941 Flavonoid biosynthesis KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: flavonoid biosynthetic process (GO:0009813);|Molecular Function: L-ascorbic acid binding (GO:0031418);|Molecular Function: naringenin 3-dioxygenase activity (GO:0045486);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN31144_c0_g1_i1 12.10626096 24.21252192 0 0 #NAME? 2.71E-07 2.83E-06 Down 5.121038 3.134221 1.982677 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31147_c0_g1_i1 27.34660139 37.58988546 17.10331732 0.454997857 -1.136068346 0.026277602 0.084615109 Down 2.628125 1.905224 1.67847 1.023374 0.54002 0.7388811 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31148_c0_g1_i1 3.563045584 0 7.126091169 Inf Inf 0.005027262 0.021295495 Up 0 0 0 1.166042 0.7992825 1.699777 XP_020550498.1 "calcium-transporting ATPase 12, plasma membrane-type [Sesamum indicum]" Q9LIK7|ACA13_ARATH "Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA13 PE=3 SV=1" sind:105163368 K01537 E3.6.3.8 Ca2+-transporting ATPase -- -- KOG0204 Calcium transporting ATPase [P] METABOLISM Inorganic ion transport and metabolism P ENOG410XNNC "ATPase, Ca transporting, plasma membrane" Molecular Function: calcium-transporting ATPase activity (GO:0005388);|Molecular Function: calmodulin binding (GO:0005516);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of plasma membrane (GO:0005887);|Molecular Function: metal ion binding (GO:0046872); PF00689.20 "Cation transporting ATPase, C-terminus" TRINITY_DN31153_c0_g1_i1 9.116467206 18.23293441 0 0 #NAME? 2.78E-06 2.48E-05 Down 1.368447 1.393839 1.04929 0 0 0 XP_012847426.1 PREDICTED: uncharacterized protein LOC105967373 [Erythranthe guttata] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN31155_c0_g1_i1 12.67004001 22.25377325 3.086306774 0.138686898 -2.850096598 0.000448844 0.002564425 Down 3.084931 3.878031 3.593185 0 0 1.207855 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31156_c0_g1_i1 15.93682995 31.8736599 0 0 #NAME? 9.53E-11 1.52E-09 Down 2.39705 2.823493 4.622545 0 0 0 XP_020273363.1 uncharacterized protein LOC109848329 [Asparagus officinalis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31162_c0_g1_i1 13.43587383 26.87174766 0 0 #NAME? 4.43E-09 5.84E-08 Down 2.991794 5.728566 5.173078 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31163_c0_g1_i1 8.05485786 16.10971572 0 0 #NAME? 1.16E-05 9.30E-05 Down 3.795733 1.697912 3.393002 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31165_c0_g1_i1 4.368744917 0.624179352 8.113310481 12.9983641 3.70025816 0.016060281 0.056478489 Up 0 0.3525045 0 0.685969 1.723841 0.7410737 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31167_c0_g1_i1 2.661642544 5.323285088 0 0 #NAME? 0.028797516 0.09126619 Down 0.6267261 0.8144112 1.276038 0 0 0 XP_011069749.1 uncharacterized protein LOC105155556 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31169_c0_g1_i1 7.737890374 0 15.47578075 Inf Inf 0.001383227 0.006958752 Up 0 0 0 0.6042788 3.04985 1.261087 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3116_c1_g1_i1 2.984933312 5.969866624 0 0 #NAME? 0.028355255 0.090084692 Down 1.241467 0 1.9787 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31171_c0_g1_i1 8.159335031 0.325611563 15.9930585 49.11698576 5.618150122 2.33E-05 0.000176111 Up 0.0539556 0 0 1.053504 0.4595065 0.6929545 AOQ14468.1 RpL22-PA [synthetic construct] Q9SRX7|RL221_ARATH Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A PE=3 SV=1 apro:F751_1194 K02891 "RP-L22e, RPL22" large subunit ribosomal protein L22e ko03010 Ribosome KOG3434 60S ribosomal protein L22 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " B COG5602 Paired AMPhipathic helix protein Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF01776.16 Ribosomal L22e protein family TRINITY_DN31177_c0_g1_i1 14.86016719 23.37355118 6.34678321 0.271536968 -1.880779472 0.009282471 0.03582881 Down 2.530776 3.009011 1.504475 0.8276596 0.2042332 0.6014178 -- -- -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN31181_c0_g1_i1 9.3885532 17.30706966 1.470036737 0.084938512 -3.557437361 0.000633763 0.003482516 Down 1.353906 3.613842 1.813959 0.4891992 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31186_c0_g1_i2 8.596409804 15.69677244 1.496047164 0.095309222 -3.39124038 0.001268626 0.006445072 Down 1.504936 2.43746 3.237952 0 0.2281488 0.2631254 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31189_c0_g1_i1 6.73878572 12.37504389 1.102527553 0.08909282 -3.488547026 0.004398841 0.019000743 Down 1.824946 1.350778 2.761838 0.4640749 0 0 OTG30017.1 "putative zinc finger, CCHC-type [Helianthus annuus]" P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN31193_c0_g1_i1 11.83996735 21.84238877 1.837545922 0.084127516 -3.571278434 8.33E-05 0.000562144 Down 2.391633 4.61228 4.681658 0.8055156 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31197_c0_g1_i1 7.753539675 15.14484411 0.362235236 0.023918056 -5.385756031 0.000123192 0.000800927 Down 1.393876 1.477538 1.871841 0 0.09308534 0 AAX41185.1 ribosomal protein L10a [synthetic construct] B7F845|R10A_ORYSJ 60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1 olu:OSTLU_45590 K02865 "RP-L10Ae, RPL10A" large subunit ribosomal protein L10Ae ko03010 Ribosome KOG1570 60S ribosomal protein L10A [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0081 "Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (By similarity)" Biological Process: maturation of LSU-rRNA (GO:0000470);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF00687.20 Ribosomal protein L1p/L10e family TRINITY_DN31198_c0_g1_i1 7.56363468 0 15.12726936 Inf Inf 7.63E-06 6.31E-05 Up 0 0 0 2.634408 1.555656 0.9799647 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31203_c0_g1_i1 4.145058053 8.290116105 0 0 #NAME? 0.01473312 0.052614312 Down 2.673015 2.579284 0 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31207_c0_g1_i1 25.56853942 51.13707884 0 0 #NAME? 8.51E-17 2.26E-15 Down 4.585145 6.02323 7.96039 0 0 0 AAX32329.1 thymosin beta 4 X-linked [synthetic construct] -- -- -- -- -- -- -- -- KOG4794 Thymosin beta [N] CELLULAR PROCESSES AND SIGNALING Cell motility O ENOG410Y3I4 thymosin beta -- -- -- TRINITY_DN31208_c0_g1_i1 10.85487062 20.62303553 1.086705707 0.05269378 -4.246223502 4.04E-05 0.000291593 Down 1.99489 3.47699 1.930487 0 0.2825611 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31210_c0_g1_i1 4.230971222 8.461942443 0 0 #NAME? 0.002684534 0.012416858 Down 1.488914 0.4908249 2.740037 0 0 0 CAN77680.1 hypothetical protein VITISV_040762 [Vitis vinifera] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YZDN NA -- PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN31212_c0_g1_i1 8.155300266 3.147940534 13.16266 4.181355987 2.063970875 0.032313709 0.100230383 Up 0.3206716 1.233358 0 0.9880539 1.328517 3.029709 AOQ11293.1 RpL35-RA [synthetic construct] Q9M3D2|RL353_ARATH 60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1 mpr:MPER_15013 K02918 "RP-L35e, RPL35" large subunit ribosomal protein L35e ko03010 Ribosome KOG3436 60S ribosomal protein L35 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0255 50s ribosomal protein l29 "Biological Process: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000463);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);" PF00831.22 Ribosomal L29 protein TRINITY_DN31213_c0_g1_i1 6.716749711 0 13.43349942 Inf Inf 3.19E-05 0.000234894 Up 0 0 0 1.721696 1.398751 2.208439 CAL38390.1 "hypothetical protein, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG4103 "Mitochondrial F1F0-ATP synthase, subunit g/ATP20" [C] METABOLISM Energy production and conversion I ENOG4111TZ1 "Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(0) domain. Minor subunit located with subunit a in the membrane" -- PF04718.14 Mitochondrial ATP synthase g subunit TRINITY_DN31217_c0_g1_i1 5.429121977 10.85824395 0 0 #NAME? 0.000521228 0.002929683 Down 1.293155 1.714652 1.806274 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31222_c0_g1_i1 7.328953051 13.18541205 1.472494053 0.111675998 -3.162608944 0.005575723 0.023256344 Down 1.577993 0.867558 1.558074 0 0.3012892 0.1110498 CDP12131.1 unnamed protein product [Coffea canephora] Q84JH9|TBL25_ARATH Protein trichome birefringence-like 25 OS=Arabidopsis thaliana OX=3702 GN=TBL25 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XSGA expressed protein Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: O-acetyltransferase activity (GO:0016413); PF13839.5 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p TRINITY_DN31225_c0_g1_i1 18.80298805 37.22018775 0.385788347 0.01036503 -6.592131957 3.10E-11 5.24E-10 Down 1.802769 1.61313 1.882388 0 0 0.03727866 SJX39118.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" O04487|EF1G1_ARATH Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana OX=3702 GN=At1g09640 PE=1 SV=1 -- -- -- -- -- -- KOG0867 Glutathione S-transferase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0625 glutathione Stransferase Molecular Function: translation elongation factor activity (GO:0003746);|Cellular Component: vacuole (GO:0005773);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506); "PF00647.18,PF02798.19,PF00043.24,PF13410.5,PF14497.5,PF13417.5" "Elongation factor 1 gamma, conserved domain|Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, C-terminal domain|Glutathione S-transferase, C-terminal domain|Glutathione S-transferase, C-terminal domain|Glutathione S-transferase, N-terminal domain" TRINITY_DN31226_c0_g1_i1 5.248152719 10.49630544 0 0 #NAME? 0.004296263 0.018626576 Down 1.74011 0.8599396 4.130154 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31229_c0_g1_i1 3.193506894 6.387013787 0 0 #NAME? 0.012957958 0.047324852 Down 0.7090181 0.6678438 1.344289 0 0 0 SJX30694.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" O74173|EF1B_SCHPO Elongation factor 1-beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tef5 PE=2 SV=1 cmt:CCM_01048 K03232 EEF1B elongation factor 1-beta -- -- KOG1668 Elongation factor 1 beta/delta chain [K] INFORMATION STORAGE AND PROCESSING Transcription J COG2092 "Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA (By similarity)" Biological Process: cytoplasmic translational elongation (GO:0002182);|Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: guanyl-nucleotide exchange factor activity (GO:0005085);|Cellular Component: cytosol (GO:0005829);|Cellular Component: eukaryotic translation elongation factor 1 complex (GO:0005853); PF10587.8 Eukaryotic elongation factor 1 beta central acidic region TRINITY_DN31232_c0_g1_i1 56.87652891 0 113.7530578 Inf Inf 1.27E-39 1.01E-37 Up 0 0 0 6.429682 6.104729 6.535938 XP_020554646.1 MADS-box transcription factor 23 isoform X2 [Sesamum indicum] Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS57 PE=1 SV=2 cit:102630220 K09264 K09264 "MADS-box transcription factor, plant" -- -- KOG0014 MADS box transcription factor [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5068 Transcription factor Molecular Function: RNA polymerase II regulatory region sequence-specific DNA binding (GO:0000977);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of growth (GO:0040008);|Biological Process: positive regulation of transcription by RNA polymerase II (GO:0045944);|Molecular Function: protein dimerization activity (GO:0046983); "PF00319.17,PF01486.16" SRF-type transcription factor (DNA-binding and dimerisation domain)|K-box region TRINITY_DN31233_c0_g1_i1 4.277518424 8.555036847 0 0 #NAME? 0.002821612 0.012974215 Down 1.536502 0.2456886 2.186716 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31234_c0_g1_i1 7.19948389 14.39896778 0 0 #NAME? 7.91E-05 0.000536681 Down 0.8498019 3.997268 3.27648 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31236_c0_g1_i1 3.684805583 7.369611166 0 0 #NAME? 0.014252076 0.051166124 Down 2.02E-38 1.977519 2.095276 0.00479615 1.01E-72 2.39E-75 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31238_c0_g1_i1 11.77350512 21.61806852 1.928941734 0.089228218 -3.48635616 0.0017838 0.008708544 Down 5.198714 1.640362 2.672628 0 0 0.6468595 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31241_c0_g1_i1 3.903136025 0 7.80627205 Inf Inf 0.002833016 0.013017419 Up 0 0 0 1.623064 0.5410233 0.9105647 XP_022853839.1 protein GAMETE EXPRESSED 1 [Olea europaea var. sylvestris] Q681K7|GEX1_ARATH Protein GAMETE EXPRESSED 1 OS=Arabidopsis thaliana OX=3702 GN=GEX1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41119VX NA Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of plasma membrane (GO:0005887);|Biological Process: embryo sac development (GO:0009553);|Biological Process: pollen development (GO:0009555);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Molecular Function: identical protein binding (GO:0042802); -- -- TRINITY_DN31245_c0_g1_i1 5.565882238 11.13176448 0 0 #NAME? 0.011982251 0.044281554 Down 4.629709 0.5100097 1.606441 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31247_c0_g1_i1 11.40299841 18.72965409 4.07634272 0.217641111 -2.199976999 0.009320067 0.035956637 Down 1.195923 1.590652 0.8706057 0.2526472 0.2474564 0.1989107 XP_022854040.1 uncharacterized protein LOC111375444 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS82 Retrotransposon protein -- PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN31259_c0_g1_i1 63.10239087 7.395533839 118.8092479 16.06499956 4.005849037 8.33E-25 3.59E-23 Up 0.4820869 0.3986357 0.3165099 5.900904 5.079372 5.090101 AOQ10468.1 sesB-RA [synthetic construct] P31692|ADT_PARKE "ADP,ATP carrier protein OS=Parachlorella kessleri OX=3074 PE=3 SV=1" -- -- -- -- -- -- KOG0749 Mitochondrial ADP/ATP carrier proteins [C] METABOLISM Energy production and conversion U ENOG410XNW0 transmembrane transport Cellular Component: mitochondrial inner membrane (GO:0005743);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); PF00153.26 Mitochondrial carrier protein TRINITY_DN31260_c0_g1_i1 4.250957731 0 8.501915461 Inf Inf 0.001587968 0.007858986 Up 0 0 0 1.458419 1.234302 0.8052694 CBJ30599.1 Heat shock protein 40 [Ectocarpus siliculosus] Q03363|DNJH1_ALLPO DnaJ protein homolog 1 (Fragment) OS=Allium porrum OX=4681 GN=DNAJ1 PE=2 SV=1 cgi:CGB_A1660W K09503 DNAJA2 DnaJ homolog subfamily A member 2 ko04141 Protein processing in endoplasmic reticulum KOG0712 Molecular chaperone (DnaJ superfamily) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0484 "ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)" Biological Process: protein folding (GO:0006457);|Cellular Component: membrane (GO:0016020);|Molecular Function: heat shock protein binding (GO:0031072);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: unfolded protein binding (GO:0051082); "PF01556.17,PF00684.18" DnaJ C terminal domain|DnaJ central domain TRINITY_DN31262_c0_g1_i1 324.1855414 472.0471371 176.3239458 0.373530378 -1.420702516 1.75E-20 5.90E-19 Down 76.1367 80.48259 74.15916 25.00519 22.61129 22.00114 ADO33118.1 UDP glucosyltransferase [Scutellaria barbata] Q9AT54|SCGT_TOBAC Scopoletin glucosyltransferase OS=Nicotiana tabacum OX=4097 GN=TOGT1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: identical protein binding (GO:0042802);|Molecular Function: scopoletin glucosyltransferase activity (GO:0050275); -- -- TRINITY_DN31263_c0_g1_i1 4.314624778 8.629249555 0 0 #NAME? 0.016121483 0.056645443 Down 3.143601 2.317793 0 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31269_c0_g1_i1 17.43136716 26.46276258 8.399971752 0.317426109 -1.655507298 0.013031987 0.047551885 Down 2.647743 3.990739 2.003447 1.265213 0.941894 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3126_c0_g1_i1 13.54014758 21.00189406 6.078401103 0.289421568 -1.788755659 0.025159041 0.081609573 Down 2.891784 3.592392 6.799458 0 0.8016675 2.435675 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31276_c0_g1_i1 2.916763327 5.833526655 0 0 #NAME? 0.021191422 0.070992047 Down 0.8901397 1.733859 1.051801 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31277_c0_g1_i1 9.724576164 0.936269028 18.5128833 19.77303825 4.305462662 3.55E-05 0.000259469 Up 0 0.2350052 0 1.196602 1.262507 0.9320031 EEF38867.1 conserved hypothetical protein [Ricinus communis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41122DF NA -- PF07468.10 Agglutinin domain TRINITY_DN31278_c0_g1_i1 9.187511972 16.16996884 2.205055106 0.136367307 -2.874430283 0.007462543 0.029803555 Down 1.817831 3.838798 1.403857 0.8310928 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31279_c0_g1_i1 6.425460094 12.85092019 0 0 #NAME? 0.000131825 0.000852654 Down 2.34827 2.678161 2.113839 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31282_c0_g1_i1 9.921414375 19.84282875 0 0 #NAME? 8.33E-07 8.10E-06 Down 3.886043 2.522124 2.988451 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31285_c0_g1_i1 14.30762348 0 28.61524695 Inf Inf 1.66E-10 2.59E-09 Up 0 0 0 1.713404 2.500347 2.346894 AIZ74337.1 "eukaryotic initiation factor 4A-II-like protein, partial [Pinus massoniana]" Q4P331|IF4A_USTMA ATP-dependent RNA helicase eIF4A OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=TIF1 PE=3 SV=1 psq:PUNSTDRAFT_53429 K03257 EIF4A translation initiation factor 4A ko03013 RNA transport KOG0327 "Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases" [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " L COG0513 purine NTP-dependent helicase activity Molecular Function: translation initiation factor activity (GO:0003743);|Molecular Function: ATP-dependent RNA helicase activity (GO:0004004);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737); "PF00271.30,PF00270.28" Helicase conserved C-terminal domain|DEAD/DEAH box helicase TRINITY_DN31289_c0_g1_i1 3.550803819 7.101607639 0 0 #NAME? 0.009516881 0.036579151 Down 1.014315 1.232839 0.2810924 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3128_c0_g1_i1 28.03298249 17.81463132 38.25133366 2.147186375 1.102447422 0.023381927 0.076867237 Up 2.031717 5.649865 0.7771143 5.593313 4.490411 4.728727 XP_011082053.1 UDP-glycosyltransferase 74G1-like [Sesamum indicum] Q9SYK9|U74E2_ARATH UDP-glycosyltransferase 74E2 OS=Arabidopsis thaliana OX=3702 GN=UGT74E2 PE=1 SV=1 sind:105164920 K13691 SGT1 pathogen-inducible salicylic acid glucosyltransferase -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Biological Process: shoot system morphogenesis (GO:0010016);|Molecular Function: UDP-glucosyltransferase activity (GO:0035251);|Biological Process: cellular response to water deprivation (GO:0042631);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: indole-3-butyrate beta-glucosyltransferase activity (GO:0052638);|Biological Process: cellular response to hydrogen peroxide (GO:0070301);|Biological Process: cellular response to abscisic acid stimulus (GO:0071215);|Biological Process: cellular hyperosmotic salinity response (GO:0071475);|Biological Process: indolebutyric acid metabolic process (GO:0080024);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);|Biological Process: response to karrikin (GO:0080167); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN31292_c0_g1_i1 14.81381435 0 29.62762871 Inf Inf 1.74E-09 2.42E-08 Up 0 0 0 1.563543 1.385176 2.924421 AIC55218.1 "TMBIM6, partial [synthetic construct]" Q9LD45|BI1_ARATH Bax inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=BI-1 PE=1 SV=1 -- -- -- -- -- -- KOG1629 Bax-mediated apoptosis inhibitor TEGT/BI-1 [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms S ENOG4111GCT Bax inhibitor Biological Process: very long-chain fatty acid metabolic process (GO:0000038);|Cellular Component: nuclear envelope (GO:0005635);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: ER overload response (GO:0006983);|Biological Process: response to water deprivation (GO:0009414);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: negative regulation of apoptotic process (GO:0043066);|Biological Process: negative regulation of programmed cell death (GO:0043069); PF01027.19 Inhibitor of apoptosis-promoting Bax1 TRINITY_DN31294_c0_g1_i1 16.42462578 30.65474435 2.194507208 0.071587849 -3.804141459 1.42E-06 1.33E-05 Down 1.771837 1.143393 1.36893 0.1676843 0.06667188 0 XP_011077685.1 spermidine hydroxycinnamoyl transferase [Sesamum indicum] O64470|SHT_ARATH Spermidine hydroxycinnamoyl transferase OS=Arabidopsis thaliana OX=3702 GN=SHT PE=1 SV=1 sind:105161635 K13065 "E2.3.1.133, HCT" shikimate O-hydroxycinnamoyltransferase ko00940|ko00945|ko00941 "Phenylpropanoid biosynthesis|Stilbenoid, diarylheptanoid and gingerol biosynthesis|Flavonoid biosynthesis" -- -- -- -- -- S ENOG410YUQM shikimate quinate hydroxycinnamoyltransferase-like Biological Process: pollen development (GO:0009555);|Biological Process: pollen exine formation (GO:0010584);|Molecular Function: N-acyltransferase activity (GO:0016410);|Molecular Function: spermidine:sinapoyl CoA N-acyltransferase activity (GO:0080072);|Molecular Function: spermidine:coumaroyl CoA N-acyltransferase activity (GO:0080073);|Molecular Function: spermidine:caffeoyl CoA N-acyltransferase activity (GO:0080074);|Molecular Function: spermidine:feruloyl CoA N-acyltransferase activity (GO:0080075);|Biological Process: spermidine hydroxycinnamate conjugate biosynthetic process (GO:0080088); PF02458.14 Transferase family TRINITY_DN3129_c0_g1_i1 4.131684526 7.901133817 0.362235236 0.045845982 -4.447060903 0.015693398 0.055428761 Down 1.008953 0.701582 0.7643744 0 0.08602028 0 XP_011077082.1 LRR receptor kinase BAK1 [Sesamum indicum] O04086|Y1105_ARATH Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana OX=3702 GN=At1g11050 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN31300_c0_g1_i1 6.189063336 12.37812667 0 0 #NAME? 0.000176302 0.001109048 Down 0.9845589 3.157027 1.999433 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31306_c0_g1_i1 5.817664229 0 11.63532846 Inf Inf 0.000138377 0.000891397 Up 0 0 0 0.8354447 0.5190619 1.358945 AOQ13210.1 pAbp-PA [synthetic construct] Q5AI15|PABP_CANAL "Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PAB1 PE=3 SV=1" cal:CaO19.3037 K13126 PABPC polyadenylate-binding protein ko03018|ko03015|ko03013 RNA degradation|mRNA surveillance pathway|RNA transport KOG0123 Polyadenylate-binding protein (RRM superfamily) [AJ] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING "RNA processing and modification |Translation, ribosomal structure and biogenesis " S ENOG410XR5X "poly(A) binding protein, cytoplasmic" Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA 3'-UTR binding (GO:0003730);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: mRNA processing (GO:0006397);|Biological Process: regulation of translation (GO:0006417);|Molecular Function: poly(A) binding (GO:0008143);|Molecular Function: poly(U) RNA binding (GO:0008266);|Cellular Component: cytoplasmic stress granule (GO:0010494);|Biological Process: mRNA transport (GO:0051028);|Cellular Component: ribonucleoprotein complex (GO:1990904); "PF00076.21,PF14605.5" "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)|Nup53/35/40-type RNA recognition motif" TRINITY_DN31307_c0_g1_i1 6.55524056 13.11048112 0 0 #NAME? 0.00010822 0.000712254 Down 1.382884 1.318109 1.191658 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31308_c0_g1_i1 9.179114177 3.596370179 14.76185817 4.104654815 2.037260902 0.042010787 0.123406176 Up 0.8947615 0 1.039278 1.189563 3.632354 1.667945 ACL86085.1 "porin-PA, partial [synthetic construct]" Q9P544|VDAC_SCHPO Probable mitochondrial outer membrane protein porin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC1635.01 PE=3 SV=1 -- -- -- -- -- -- KOG3126 Porin/voltage-dependent anion-selective channel protein [P] METABOLISM Inorganic ion transport and metabolism U ENOG410ZBK1 voltage-dependent anion channel Cellular Component: mitochondrial outer membrane (GO:0005741);|Molecular Function: voltage-gated anion channel activity (GO:0008308);|Molecular Function: porin activity (GO:0015288);|Cellular Component: pore complex (GO:0046930);|Biological Process: anion transmembrane transport (GO:0098656);|Biological Process: mitochondrial transmembrane transport (GO:1990542); -- -- TRINITY_DN31311_c0_g1_i1 6.857795642 12.94401459 0.771576693 0.059608763 -4.068331764 0.001678251 0.00825584 Down 1.642855 1.47817 1.231378 0 0 0.2124225 AIC63154.1 "RPL18, partial [synthetic construct]" P42791|RL182_ARATH 60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2 nnu:104609266 K02883 "RP-L18e, RPL18" large subunit ribosomal protein L18e ko03010 Ribosome KOG1714 60s ribosomal protein L18 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1727 Ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translation (GO:0006412);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: large ribosomal subunit (GO:0015934);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF17135.3 Ribosomal protein 60S L18 and 50S L18e TRINITY_DN31312_c0_g1_i1 7.845504877 15.69100975 0 0 #NAME? 1.52E-05 0.000119003 Down 3.532555 2.06632 3.903934 0 0 0 XP_023763032.1 uncharacterized protein LOC111911483 [Lactuca sativa] P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Cellular Component: mitochondrion (GO:0005739); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN31314_c0_g1_i1 3.144564545 0 6.28912909 Inf Inf 0.00942635 0.036286493 Up 0 0 0 1.065054 0.8149504 0.5928032 AOQ11416.1 kdn-RB [synthetic construct] Q9M1D3|CISY5_ARATH "Citrate synthase 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CSY5 PE=1 SV=2" ppp:PHYPADRAFT_140151 K01647 "CS, gltA" citrate synthase ko00020|ko00630 Citrate cycle (TCA cycle)|Glyoxylate and dicarboxylate metabolism KOG2617 Citrate synthase [C] METABOLISM Energy production and conversion C COG0372 citrate synthase Molecular Function: citrate (Si)-synthase activity (GO:0004108);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial matrix (GO:0005759);|Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: tricarboxylic acid cycle (GO:0006099); PF00285.20 "Citrate synthase, C-terminal domain" TRINITY_DN31318_c0_g1_i1 8.003031856 0 16.00606371 Inf Inf 4.01E-06 3.48E-05 Up 0 0 0 1.632437 0.8034358 1.230269 AAI56337.1 "Myosin, heavy chain 13, skeletal muscle, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG0161 Myosin class II heavy chain [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5022 myosin heavy chain -- PF01576.18 Myosin tail TRINITY_DN3131_c0_g1_i1 4.940923484 9.881846968 0 0 #NAME? 0.001704813 0.008367928 Down 3.677384 0.9106267 1.477203 0 0 0 XP_022880699.1 uncharacterized protein LOC111397969 [Olea europaea var. sylvestris] P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN31321_c0_g1_i1 7.508692222 15.01738444 0 0 #NAME? 2.62E-05 0.000195522 Down 2.351606 3.289191 2.944848 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31322_c0_g1_i1 31.26469361 51.48409385 11.04529337 0.214537978 -2.220695038 0.000182757 0.001146001 Down 4.222748 4.614656 2.129948 0.4189132 1.050927 0.38993 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31331_c0_g1_i1 5.871424096 10.60376231 1.139085878 0.107422804 -3.218627814 0.028405126 0.090210446 Down 2.959709 1.643616 0.5074158 0.2044305 0 0.2597305 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31332_c0_g1_i1 18.36838048 26.73388371 10.00287726 0.374164763 -1.418254397 0.021624098 0.072090384 Down 1.740843 1.712609 2.026958 0.1225506 0.9604373 0.6130774 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31335_c0_g1_i1 4.091984908 0 8.183969815 Inf Inf 0.002098626 0.010039302 Up 0 0 0 0.5869611 1.160734 1.116578 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31342_c0_g1_i1 22.1165325 0 44.233065 Inf Inf 6.66E-16 1.65E-14 Up 0 0 0 4.110957 3.450675 3.807922 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31343_c0_g1_i1 6.7024051 13.4048102 0 0 #NAME? 0.002901236 0.013277123 Down 1.895577 4.894165 0.9792016 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31348_c0_g1_i1 13.32393255 26.64786511 0 0 #NAME? 0.000742225 0.004005688 Down 9.190348 2.136561 3.033835 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31352_c0_g1_i1 9.979324146 0 19.95864829 Inf Inf 0.001069029 0.005540355 Up 0 0 0 0.72834 5.820501 3.040374 AOQ02763.1 "RpL37a-RA, partial [synthetic construct]" Q43292|RL372_ARATH 60S ribosomal protein L37-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37B PE=3 SV=2 aor:AOR_1_564084 K02922 "RP-L37e, RPL37" large subunit ribosomal protein L37e ko03010 Ribosome KOG3475 60S ribosomal protein L37 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2126 Binds to the 23S rRNA (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN31360_c0_g1_i1 11.54781964 22.32406259 0.771576693 0.034562557 -4.854646221 3.50E-06 3.07E-05 Down 1.584052 1.085115 2.10016 0 0 0.1060192 PRQ34951.1 putative RNA-directed DNA polymerase [Rosa chinensis] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN31361_c0_g1_i1 7.650678204 13.49018023 1.811176178 0.134258857 -2.89691083 0.008864137 0.034447989 Down 3.948722 1.907669 2.562089 0 0.9017685 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31371_c0_g1_i1 23.63008336 32.75824076 14.50192597 0.442695506 -1.175613367 0.030798258 0.096282737 Down 2.524524 2.85699 2.271475 0.9197089 0.914102 0.9314922 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31372_c0_g1_i1 8.476664611 2.430666778 14.52266244 5.974764858 2.578881936 0.007511964 0.029961389 Up 0 0.6685086 0.1056138 0.7019182 1.384685 1.475197 ACL89938.1 Oscp-PA [synthetic construct] P22778|ATPO_IPOBA "ATP synthase subunit O, mitochondrial OS=Ipomoea batatas OX=4120 PE=1 SV=1" clu:CLUG_00602 K02137 "ATPeF0O, ATP5O, ATP5" F-type H+-transporting ATPase subunit O ko00190 Oxidative phosphorylation KOG1662 "Mitochondrial F1F0-ATP synthase, subunit OSCP/ATP5" [C] METABOLISM Energy production and conversion C COG0712 "F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity)" "Cellular Component: mitochondrial inner membrane (GO:0005743);|Biological Process: ATP synthesis coupled proton transport (GO:0015986);|Molecular Function: proton-transporting ATP synthase activity, rotational mechanism (GO:0046933);" PF00213.17 ATP synthase delta (OSCP) subunit TRINITY_DN31375_c0_g1_i1 3.737716451 7.089644556 0.385788347 0.054415753 -4.199831828 0.028874628 0.091408464 Down 1.644275 0.7397456 0.3921024 0 0 0.1331731 KYP53907.1 Transposon TX1 uncharacterized [Cajanus cajan] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN31379_c0_g1_i1 13.48325516 24.73544479 2.231065533 0.090197106 -3.470775046 3.61E-05 0.000263445 Down 2.387779 1.361165 2.23283 0.1369465 0.1349712 0.140266 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3137_c0_g1_i1 59.77733533 39.00274901 80.55192166 2.065288312 1.046343194 0.001728275 0.008469348 Up 7.582066 4.885748 6.977336 8.925899 12.5508 10.92755 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31380_c0_g1_i1 10.43957443 0.870218398 20.00893046 22.99299868 4.523122725 1.31E-05 0.000103789 Up 0 0.1581878 0.0628376 1.282675 1.492827 1.13108 ATO95056.1 "hypothetical protein, partial [synthetic construct]" Q6C603|RL7_YARLI 60S ribosomal protein L7 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=RPL7 PE=3 SV=1 mrr:Moror_828 K02937 "RP-L7e, RPL7" large subunit ribosomal protein L7e ko03010 Ribosome KOG3184 60S ribosomal protein L7 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1841 ribosomal large subunit biogenesis "Biological Process: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000463);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);" "PF00327.19,PF08079.11" Ribosomal protein L30p/L7e|Ribosomal L30 N-terminal domain TRINITY_DN31382_c0_g1_i1 3.087670005 6.175340009 0 0 #NAME? 0.014263347 0.051199023 Down 0.5572088 0.3632278 1.575738 0 0 0 GAU36760.1 hypothetical protein TSUD_213250 [Trifolium subterraneum] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN31386_c0_g1_i1 19.77638318 31.75704221 7.795724152 0.245480171 -2.026321601 0.000899567 0.004751056 Down 4.57752 6.2008 6.491936 1.506624 0.9934446 1.00657 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31387_c0_g1_i1 20.93190425 36.32024568 5.543562824 0.152630103 -2.711888568 1.71E-05 0.000133153 Down 1.481046 1.505269 1.267107 0.1017811 0.2697138 0.144287 XP_019184638.1 PREDICTED: uncharacterized protein LOC109179591 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF02992.13,PF13963.5" Transposase family tnp2|Transposase-associated domain TRINITY_DN31389_c0_g1_i1 7.151637639 0.492078091 13.81119719 28.06708413 4.810807286 0.000381365 0.002219114 Up 0 0 0.1563816 0.516906 1.204421 1.443103 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31393_c0_g1_i1 8.453841547 16.90768309 0 0 #NAME? 5.88E-06 4.96E-05 Down 2.868066 1.880997 3.876867 0 0 0 SJX46132.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" Q9M9W1|RL222_ARATH 60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1 egr:104415605 K02891 "RP-L22e, RPL22" large subunit ribosomal protein L22e ko03010 Ribosome KOG3434 60S ribosomal protein L22 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J ENOG4111UVJ Ribosomal protein Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: polysomal ribosome (GO:0042788); PF01776.16 Ribosomal L22e protein family TRINITY_DN31412_c0_g1_i1 7.981827435 15.96365487 0 0 #NAME? 1.98E-05 0.000151899 Down 1.553813 3.045126 4.910715 0 0 0 XP_020546936.1 uncharacterized protein LOC110011314 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- PF08284.10 Retroviral aspartyl protease TRINITY_DN3141_c0_g1_i1 5.397310916 0.492078091 10.30254374 20.93680642 4.387969494 0.003871581 0.017007906 Up 0 0 0.3372361 1.381317 2.494326 0.8243846 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31420_c0_g1_i1 20.75512174 0 41.51024348 Inf Inf 6.47E-15 1.49E-13 Up 0 0 0 4.747831 3.482907 6.561575 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31421_c0_g1_i1 9.401089355 3.648898923 15.15327979 4.152836269 2.054096993 0.024520124 0.079965657 Up 0.926887 0.4565671 1.095174 3.138349 2.736869 1.702913 XP_016652446.1 PREDICTED: LOW QUALITY PROTEIN: DNA polymerase-like [Prunus mume] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31423_c0_g1_i1 5.880073857 11.76014771 0 0 #NAME? 0.000297043 0.001774871 Down 1.251547 2.055966 1.237884 0 0 0 XP_020548074.1 glutamate receptor 2.7 [Sesamum indicum] Q9SHV1|GLR22_ARATH Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1 sind:105157904 K05387 GRIP "glutamate receptor, ionotropic, plant" -- -- KOG1052 Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [PET] METABOLISM|METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Amino acid transport and metabolism |Signal transduction mechanisms S ENOG410XQQV glutamate receptor Molecular Function: ionotropic glutamate receptor activity (GO:0004970);|Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: intracellular (GO:0005622);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: calcium ion transport (GO:0006816);|Molecular Function: glutamate receptor activity (GO:0008066);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: calcium-mediated signaling (GO:0019722);|Biological Process: cellular response to amino acid stimulus (GO:0071230); -- -- TRINITY_DN31424_c0_g1_i1 13.06021078 25.39595109 0.724470471 0.028527007 -5.131527807 6.37E-07 6.30E-06 Down 5.290904 4.783061 3.759518 0 0.3451242 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31425_c0_g1_i1 9.171993793 0 18.34398759 Inf Inf 6.47E-07 6.39E-06 Up 0 0 0 1.439013 2.268237 3.473314 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z7FK NA -- PF17064.4 Sleepless protein TRINITY_DN31427_c0_g1_i1 7.468345413 14.93669083 0 0 #NAME? 3.21E-05 0.000236148 Down 2.729424 2.33232 1.580706 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31431_c0_g1_i1 5.393416757 10.78683351 0 0 #NAME? 0.014566524 0.052146547 Down 1.846977 2.969862 0 0 0 0 KRH37386.1 hypothetical protein GLYMA_09G062900 [Glycine max] P48980|BGAL_SOLLC Beta-galactosidase OS=Solanum lycopersicum OX=4081 PE=1 SV=1 -- -- -- -- -- -- KOG0496 Beta-galactosidase [G] METABOLISM Carbohydrate transport and metabolism G COG1874 beta-galactosidase Molecular Function: beta-galactosidase activity (GO:0004565);|Cellular Component: cell wall (GO:0005618);|Cellular Component: vacuole (GO:0005773);|Biological Process: carbohydrate metabolic process (GO:0005975);|Molecular Function: carbohydrate binding (GO:0030246); -- -- TRINITY_DN31435_c0_g1_i1 3.651219717 7.302439435 0 0 #NAME? 0.007336287 0.029382043 Down 1.090574 1.363711 1.098747 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31436_c0_g1_i1 4.003095652 8.006191304 0 0 #NAME? 0.00456375 0.019615784 Down 1.621583 2.067472 1.25019 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31438_c0_g1_i1 4.821379681 1.143301217 8.499458145 7.434137232 2.89416532 0.036638901 0.110655332 Up 0.3866568 0 0.303081 2.551854 0.8541912 0.8686726 KYP36391.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN31439_c0_g1_i1 9.853702367 17.13484044 2.57256429 0.15013646 -2.735653721 0.004247934 0.01843994 Down 3.783902 4.158225 1.888905 1.142884 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3143_c0_g1_i1 9.709596876 17.87604037 1.543153387 0.086325235 -3.534073832 0.010189339 0.038659699 Down 1.484087 3.379403 0.8279469 0 0 0.4097416 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31440_c0_g1_i1 6.108728829 12.21745766 0 0 #NAME? 0.000896532 0.004739844 Down 1.765221 0.3442801 2.271213 0 0 0 PIN14477.1 Transcription factor MEIS1 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31441_c0_g1_i1 12.82423552 25.64847105 0 0 #NAME? 7.97E-07 7.77E-06 Down 1.42815 1.434035 3.153922 0 0 0 AIC55066.1 "RPS4X, partial [synthetic construct]" O59950|RS4_YARLI 40S ribosomal protein S4 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=RPS4 PE=2 SV=1 cthr:CTHT_0012920 K02987 "RP-S4e, RPS4" small subunit ribosomal protein S4e ko03010 Ribosome KOG0378 40S ribosomal protein S4 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1471 (ribosomal) protein Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); "PF00900.19,PF16121.4,PF08071.11,PF01479.24,PF00467.28" Ribosomal family S4e|40S ribosomal protein S4 C-terminus|RS4NT (NUC023) domain|S4 domain|KOW motif TRINITY_DN31442_c0_g1_i1 6.29201888 12.58403776 0 0 #NAME? 0.00017546 0.001104514 Down 2.962709 2.886112 1.625192 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31443_c0_g1_i1 4.907118767 9.814237534 0 0 #NAME? 0.001251865 0.006371755 Down 1.925197 1.406145 1.109004 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31444_c0_g1_i1 3.547703623 7.095407246 0 0 #NAME? 0.008737547 0.034044935 Down 0.8224863 1.871991 0.8279247 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31452_c0_g1_i1 5.276177335 10.55235467 0 0 #NAME? 0.000704363 0.003824999 Down 2.421965 1.900992 1.869793 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31454_c0_g1_i1 4.892817478 9.785634956 0 0 #NAME? 0.001267364 0.00644068 Down 1.066501 3.116825 1.225916 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31456_c0_g1_i1 7.164661461 0 14.32932292 Inf Inf 1.41E-05 0.000111382 Up 0 0 0 2.57581 2.816636 0.7967205 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31457_c0_g1_i1 13.45159367 26.90318733 0 0 #NAME? 0.000340411 0.002008354 Down 8.75889 3.875631 1.908897 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31461_c0_g1_i1 4.052789608 0 8.105579217 Inf Inf 0.002157981 0.010278829 Up 0 0 0 1.230608 1.427623 0.6629028 ACL90703.1 Cyp4g15-PA [synthetic construct] -- -- -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 -- PF00067.21 Cytochrome P450 TRINITY_DN31463_c0_g1_i1 7.894851229 0 15.78970246 Inf Inf 0.001680481 0.00826279 Up 0 0 0 0.3522686 2.810788 4.49592 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31464_c0_g1_i1 6.477428287 12.95485657 0 0 #NAME? 0.000149938 0.000958747 Down 3.296553 3.256952 0.8716813 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31469_c0_g1_i1 5.770576221 11.54115244 0 0 #NAME? 0.0003556 0.002085979 Down 1.919217 2.332396 1.483508 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31470_c0_g1_i1 5.771706742 10.80839511 0.735018369 0.068004395 -3.878228206 0.013473437 0.048877146 Down 1.459808 0.9639481 3.694346 0.3944474 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31472_c0_g1_i1 11.62516511 23.25033022 0 0 #NAME? 7.50E-08 8.42E-07 Down 2.339269 1.919779 1.708495 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31474_c0_g1_i1 7.496679139 1.722273319 13.27108496 7.705562648 2.945900304 0.009799557 0.03744371 Up 0 0 0.8389907 1.14434 2.652126 1.14147 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31476_c0_g1_i1 7.127653159 14.25530632 0 0 #NAME? 0.007761011 0.030832799 Down 0.6502352 4.082452 1.278567 0 0 0 XP_021682122.1 uncharacterized protein LOC110666060 [Hevea brasiliensis] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN31477_c0_g1_i1 17.3808969 34.7617938 0 0 #NAME? 2.82E-07 2.93E-06 Down 6.159123 2.470941 3.118066 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31485_c0_g1_i1 14.72628417 0 29.45256835 Inf Inf 8.89E-11 1.42E-09 Up 0 0 0 2.562651 1.839037 2.791191 ACL86413.1 "Mlc1-PB, partial [synthetic construct]" Q09196|MLR4_SCHPO Myosin regulatory light chain cdc4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdc4 PE=1 SV=1 smo:SELMODRAFT_107557 K02183 CALM calmodulin ko04626|ko04070 Plant-pathogen interaction|Phosphatidylinositol signaling system KOG0030 "Myosin essential light chain, EF-Hand protein superfamily" [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z ENOG4111WV2 myosin alkali light chain 1 Biological Process: division septum assembly (GO:0000917);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: actomyosin contractile ring (GO:0005826);|Cellular Component: cytosol (GO:0005829);|Cellular Component: myosin II complex (GO:0016460);|Cellular Component: cell division site (GO:0032153);|Molecular Function: metal ion binding (GO:0046872);|Cellular Component: medial cortical node (GO:0071341);|Biological Process: protein localization to medial cortex (GO:0071574);|Biological Process: mitotic actomyosin contractile ring assembly (GO:1903475);|Biological Process: mitotic actomyosin contractile ring assembly actin filament organization (GO:1903479); "PF13405.5,PF13499.5,PF00036.31" EF-hand domain|EF-hand domain pair|EF hand TRINITY_DN31495_c0_g1_i1 9.685470587 0 19.37094117 Inf Inf 2.74E-07 2.85E-06 Up 0 0 0 2.636302 1.611785 2.413533 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31497_c0_g1_i1 21.4546627 39.05144193 3.857883467 0.098789783 -3.339494349 6.45E-05 0.000445538 Down 7.030409 10.40311 4.154135 0 0 1.830172 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3149_c0_g1_i1 14.7089369 27.10314372 2.31473008 0.085404487 -3.549544325 1.02E-05 8.27E-05 Down 2.229743 3.145894 2.435838 0 0 0.5403335 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31503_c0_g1_i1 41.27382007 69.37197493 13.17566521 0.18992778 -2.396477155 2.35E-08 2.83E-07 Down 10.03174 13.43206 11.98908 0.7337602 1.464583 3.278507 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31505_c0_g1_i1 7.872886093 0 15.74577219 Inf Inf 5.19E-06 4.42E-05 Up 0 0 0 1.719847 0.7933566 2.192762 AOQ08538.1 "Cpr62Bc-RA, partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YSFI Cuticular protein -- PF00379.22 Insect cuticle protein TRINITY_DN31506_c0_g1_i1 7.179218472 14.35843694 0 0 #NAME? 0.001998557 0.009628581 Down 3.360084 0.4139611 4.615348 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31511_c0_g1_i1 8.146829232 14.84471752 1.448940942 0.097606501 -3.356878943 0.002233644 0.010578512 Down 1.470395 2.775562 2.596548 0 0.5889505 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31515_c0_g1_i1 4.902062489 9.418336631 0.385788347 0.04096141 -4.609590818 0.047200878 0.135324288 Down 1.277165 2.753049 0.163331 0 0 0.2002886 AHW04050.1 "diterpene synthase TPS15, partial [Plectranthus barbatus]" Q38802|KSA_ARATH "Ent-copalyl diphosphate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GA1 PE=1 SV=1" sind:105163273 K04120 E5.5.1.13 ent-copalyl diphosphate synthase ko00904 Diterpenoid biosynthesis -- -- -- -- -- I ENOG410XNXR diphosphate synthase Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: chloroplast (GO:0009507);|Biological Process: gibberellin biosynthetic process (GO:0009686);|Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);|Molecular Function: ent-copalyl diphosphate synthase activity (GO:0009905);|Molecular Function: terpene synthase activity (GO:0010333);|Biological Process: diterpenoid biosynthetic process (GO:0016102); PF01397.20 "Terpene synthase, N-terminal domain" TRINITY_DN31518_c0_g1_i1 12.54715026 25.09430052 0 0 #NAME? 6.66E-08 7.53E-07 Down 5.485463 2.163398 3.869787 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3151_c0_g1_i1 246.0913135 366.8574855 125.3251416 0.341618058 -1.549543858 0.000587063 0.003256575 Down 33.02007 37.23652 18.65078 6.641654 6.604484 11.29654 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31520_c0_g1_i1 8.985751594 3.036682654 14.93482053 4.918136743 2.298111848 0.016945365 0.05896087 Up 0 0.5720937 0.5846818 1.418568 1.148354 1.893905 ACL88532.1 "Gs2-PA, partial [synthetic construct]" Q75BT9|GLNA_ASHGO Glutamine synthetase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=GLN1 PE=3 SV=1 fme:FOMMEDRAFT_21555 K01915 "glnA, GLUL" glutamine synthetase ko00910|ko00630|ko00250|ko00220 "Nitrogen metabolism|Glyoxylate and dicarboxylate metabolism|Alanine, aspartate and glutamate metabolism|Arginine biosynthesis" KOG0683 Glutamine synthetase [E] METABOLISM Amino acid transport and metabolism E COG0174 glutamine synthetase Molecular Function: glutamate-ammonia ligase activity (GO:0004356);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: glutamine biosynthetic process (GO:0006542);|Cellular Component: nuclear periphery (GO:0034399); PF00120.23 "Glutamine synthetase, catalytic domain" TRINITY_DN31522_c0_g1_i1 4.622332547 0 9.244665094 Inf Inf 0.000875298 0.004636759 Up 0 0 0 1.100016 1.29057 0.7815192 AIC63084.1 "MYH7, partial [synthetic construct]" Q9USI6|MYO2_SCHPO Myosin type-2 heavy chain 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=myo2 PE=1 SV=1 -- -- -- -- -- -- KOG0161 Myosin class II heavy chain [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5022 myosin heavy chain "Molecular Function: microfilament motor activity (GO:0000146);|Molecular Function: calmodulin binding (GO:0005516);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: actomyosin contractile ring (GO:0005826);|Cellular Component: myosin II complex (GO:0016460);|Molecular Function: calcium-dependent ATPase activity (GO:0030899);|Cellular Component: medial cortex (GO:0031097);|Cellular Component: cell division site (GO:0032153);|Cellular Component: medial cortex septin ring (GO:0036391);|Molecular Function: actin filament binding (GO:0051015);|Cellular Component: medial cortical node (GO:0071341);|Cellular Component: actomyosin contractile ring, proximal layer (GO:0120104);|Cellular Component: actomyosin contractile ring, intermediate layer (GO:0120105);|Cellular Component: actomyosin contractile ring, distal actin filament layer (GO:0120106);|Biological Process: mitotic actomyosin contractile ring contraction (GO:1902404);|Biological Process: mitotic actomyosin contractile ring assembly (GO:1903475);|Biological Process: actin filament bundle convergence involved in mitotic contractile ring assembly (GO:1903478);" PF00063.20 Myosin head (motor domain) TRINITY_DN31525_c0_g1_i1 7.827200639 12.7354236 2.918977679 0.22920146 -2.125311862 0.041823556 0.122951666 Down 1.198298 3.516 1.421027 0.6133491 0.6117943 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31527_c0_g1_i1 24.37778875 48.7555775 0 0 #NAME? 7.55E-16 1.86E-14 Down 5.09136 3.734192 4.068055 0 0 0 BAI46388.1 "ribosomal protein L10, partial [synthetic construct]" Q9P769|RL10B_SCHPO 60S ribosomal protein L10-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl1002 PE=3 SV=1 gtr:GLOTRDRAFT_112126 K02866 "RP-L10e, RPL10" large subunit ribosomal protein L10e ko03010 Ribosome KOG0857 60s ribosomal protein L10 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0197 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs (By similarity) Biological Process: ribosomal large subunit assembly (GO:0000027);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Biological Process: ribosome biogenesis (GO:0042254); PF00252.17 Ribosomal protein L16p/L10e TRINITY_DN31528_c0_g1_i1 16.49715662 32.99431323 0 0 #NAME? 9.13E-07 8.82E-06 Down 10.28181 3.905409 5.105455 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31531_c0_g1_i1 11.38761245 3.690585684 19.08463922 5.171168171 2.370490223 0.017968256 0.061967979 Up 0 0 1.629445 2.858771 1.047964 2.896123 ACL92759.1 RpS15Aa-PA [synthetic construct] Q752J5|RS22_ASHGO 40S ribosomal protein S22 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=RPS22A PE=3 SV=3 clu:CLUG_03557 K02957 "RP-S15Ae, RPS15A" small subunit ribosomal protein S15Ae ko03010 Ribosome KOG1754 40S ribosomal protein S15/S22 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0096 "One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF00410.18 Ribosomal protein S8 TRINITY_DN31532_c0_g1_i1 15.94442226 3.096970594 28.79187393 9.296786344 3.2167321 7.34E-06 6.09E-05 Up 1.060107 0 0.201175 3.295986 4.379579 2.285513 AOQ02777.1 "RpL32-RC, partial [synthetic construct]" P49211|RL321_ARATH 60S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2 smo:SELMODRAFT_146656 K02912 "RP-L32e, RPL32" large subunit ribosomal protein L32e ko03010 Ribosome KOG0878 60S ribosomal protein L32 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1717 (ribosomal) protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: polysomal ribosome (GO:0042788); PF01655.17 Ribosomal protein L32 TRINITY_DN31542_c0_g1_i1 4.078979694 0 8.157959388 Inf Inf 0.002118089 0.010117478 Up 0 0 0 1.415642 1.012974 0.9198151 KZM20414.1 hypothetical protein ST47_g8416 [Ascochyta rabiei] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111Z3D NA -- -- -- TRINITY_DN31543_c0_g1_i1 4.081757736 0.738117137 7.425398335 10.05991863 3.330546731 0.044859435 0.129924351 Up 0 0 0.3599743 0.3755521 1.346236 1.089773 PIN15005.1 putative chitinase [Handroanthus impetiginosus] Q7Y1Z0|CHI5_ORYSJ Chitinase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht5 PE=2 SV=1 sind:105172091 K01183 E3.2.1.14 chitinase ko00520 Amino sugar and nucleotide sugar metabolism KOG4742 Predicted chitinase [R] POORLY CHARACTERIZED General function prediction only G COG3979 chitinase Biological Process: polysaccharide catabolic process (GO:0000272);|Molecular Function: chitinase activity (GO:0004568);|Biological Process: chitin catabolic process (GO:0006032);|Biological Process: defense response (GO:0006952);|Molecular Function: chitin binding (GO:0008061);|Biological Process: cell wall macromolecule catabolic process (GO:0016998); PF00182.18 Chitinase class I TRINITY_DN31544_c0_g1_i1 7.020274877 14.04054975 0 0 #NAME? 5.16E-05 0.000364472 Down 2.069483 3.412648 3.207615 0 0 0 XP_011092217.1 uncharacterized protein LOC105172455 isoform X2 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG2088 Predicted lipase/calmodulin-binding heat-shock protein [IOT] METABOLISM|CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Lipid transport and metabolism |Posttranslational modification, protein turnover, chaperones |Signal transduction mechanisms " S ENOG410XRFI triglyceride lipase activity -- PF01764.24 Lipase (class 3) TRINITY_DN31548_c0_g1_i1 3.315965866 6.631931732 0 0 #NAME? 0.012669652 0.046383864 Down 1.9713 0.6345018 0.7475345 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31554_c0_g1_i1 9.857902887 16.79682809 2.918977679 0.173781482 -2.524653737 0.006527002 0.026596069 Down 2.182937 4.957337 3.434505 0.7345552 0.7353471 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31557_c0_g1_i1 5.28835927 10.57671854 0 0 #NAME? 0.001068994 0.005540355 Down 2.649377 1.924757 0.5091042 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31558_c0_g1_i1 5.118573693 10.23714739 0 0 #NAME? 0.007162127 0.028798869 Down 0.6740217 4.123277 1.659584 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31563_c0_g1_i1 3.952887703 7.905775406 0 0 #NAME? 0.005197501 0.021885913 Down 1.800008 2.234809 0.7079794 0 0 0 XP_012845857.1 PREDICTED: uncharacterized protein LOC105965855 [Erythranthe guttata] P92522|M850_ARATH Uncharacterized mitochondrial protein AtMg00850 OS=Arabidopsis thaliana OX=3702 GN=AtMg00850 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN31564_c0_g1_i1 6.045979835 12.09195967 0 0 #NAME? 0.000257575 0.001561473 Down 2.824365 3.012066 1.299659 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31565_c0_g1_i1 3.588829834 7.177659668 0 0 #NAME? 0.007140134 0.028725704 Down 0.6498125 1.286441 2.009248 0 0 0 ATB23851.1 CD43ex-45int [Synthetic plasmid pRK96] P32586|PYP2_SCHPO Tyrosine-protein phosphatase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pyp2 PE=1 SV=1 -- -- -- -- -- -- KOG4228 Protein tyrosine phosphatase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG5599 protein tyrosine phosphatase Molecular Function: protein tyrosine phosphatase activity (GO:0004725);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: cytosol (GO:0005829);|Biological Process: cell cycle (GO:0007049);|Biological Process: negative regulation of G2/M transition of mitotic cell cycle (GO:0010972);|Biological Process: negative regulation of stress-activated MAPK cascade (GO:0032873);|Molecular Function: MAP kinase tyrosine phosphatase activity (GO:0033550);|Biological Process: cell division (GO:0051301);|Biological Process: cellular response to osmotic stress (GO:0071470); PF00102.26 Protein-tyrosine phosphatase TRINITY_DN31567_c0_g1_i1 14.17921052 28.35842104 0 0 #NAME? 1.30E-09 1.82E-08 Down 4.843376 4.314476 7.808047 0 0 0 SJX40482.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" P51425|RL39_MAIZE 60S ribosomal protein L39 OS=Zea mays OX=4577 GN=RPL39 PE=3 SV=1 pda:103712149 K02924 "RP-L39e, RPL39" large subunit ribosomal protein L39e ko03010 Ribosome KOG0002 60s ribosomal protein L39 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2167 Ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); -- -- TRINITY_DN31569_c0_g1_i1 24.48283809 0 48.96567617 Inf Inf 1.49E-17 4.16E-16 Up 0 0 0 6.313599 7.053438 6.004978 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31576_c0_g1_i1 15.22497718 30.44995437 0 0 #NAME? 2.91E-10 4.40E-09 Down 3.573501 4.643591 6.405362 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31580_c0_g1_i1 7.294203573 0 14.58840715 Inf Inf 1.29E-05 0.000102252 Up 0 0 0 2.48572 1.063087 2.659202 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31581_c0_g1_i1 4.483047203 0 8.966094406 Inf Inf 0.001140719 0.005865505 Up 0 0 0 1.144392 1.13942 1.799942 PIN06774.1 Multicopper oxidase [Handroanthus impetiginosus] Q9FY79|LAC14_ARATH Laccase-14 OS=Arabidopsis thaliana OX=3702 GN=LAC14 PE=2 SV=1 sind:105158919 K05909 E1.10.3.2 laccase -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase "Molecular Function: copper ion binding (GO:0005507);|Molecular Function: oxidoreductase activity, oxidizing metal ions (GO:0016722);|Biological Process: lignin catabolic process (GO:0046274);|Cellular Component: apoplast (GO:0048046);|Molecular Function: hydroquinone:oxygen oxidoreductase activity (GO:0052716);" PF00394.21 Multicopper oxidase TRINITY_DN31583_c0_g1_i1 10.09442299 20.18884599 0 0 #NAME? 5.15E-07 5.16E-06 Down 2.325769 4.509477 5.576307 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31586_c0_g1_i1 12.53707027 25.07414053 0 0 #NAME? 1.48E-08 1.82E-07 Down 2.272569 2.568792 3.795363 0 0 0 PHT39912.1 Lysine-specific demethylase [Capsicum baccatum] Q336N8|JM706_ORYSJ Lysine-specific demethylase JMJ706 OS=Oryza sativa subsp. japonica OX=39947 GN=JMJ706 PE=2 SV=1 -- -- -- -- -- -- KOG1246 "DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain" [R] POORLY CHARACTERIZED General function prediction only S ENOG41104I0 jumonji domain protein "Cellular Component: heterochromatin (GO:0000792);|Molecular Function: DNA-binding transcription repressor activity, RNA polymerase II-specific (GO:0001227);|Molecular Function: chromatin binding (GO:0003682);|Cellular Component: nucleus (GO:0005634);|Molecular Function: histone demethylase activity (GO:0032452);|Molecular Function: histone demethylase activity (H3-K9 specific) (GO:0032454);|Molecular Function: histone demethylase activity (H3-trimethyl-K4 specific) (GO:0034647);|Molecular Function: methylated histone binding (GO:0035064);|Cellular Component: histone methyltransferase complex (GO:0035097);|Biological Process: positive regulation of gene expression, epigenetic (GO:0045815);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: flower morphogenesis (GO:0048439);|Molecular Function: dioxygenase activity (GO:0051213);" -- -- TRINITY_DN31587_c0_g1_i1 7.59755603 0 15.19511206 Inf Inf 7.45E-06 6.17E-05 Up 0 0 0 2.505877 2.102101 1.75794 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31591_c0_g1_i1 4.042881911 8.085763821 0 0 #NAME? 0.004410914 0.01904 Down 1.720158 2.153688 1.018183 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31599_c0_g1_i1 10.62648758 18.93824508 2.31473008 0.122225162 -3.032386773 0.000942281 0.004952295 Down 4.883186 3.162633 3.041487 0 0 1.178019 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31601_c0_g1_i1 18.83156489 27.81421708 9.848912694 0.354096348 -1.49778613 0.016480497 0.057679197 Down 3.793361 6.184372 4.811499 2.038785 2.077005 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31603_c0_g1_i1 10.98802442 21.97604884 0 0 #NAME? 1.55E-07 1.66E-06 Down 3.016567 3.45411 4.133431 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31606_c0_g1_i1 19.26537754 0.246039046 38.28471603 155.6042292 7.281737461 9.65E-13 1.86E-11 Up 0 0 0.133345 2.741932 4.829102 4.45862 ACL91850.1 PebIII-PA [synthetic construct] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111U5H protein serine threonine kinase -- PF03392.12 "Insect pheromone-binding family, A10/OS-D" TRINITY_DN31607_c0_g1_i1 12.54307498 4.097731449 20.98841851 5.121960474 2.35669612 0.001651894 0.008141631 Up 0.5774314 1.70035 0 3.346957 4.370048 1.705771 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31612_c0_g1_i1 3.674912185 0 7.34982437 Inf Inf 0.00393292 0.01722735 Up 0 0 0 1.249469 0.8282857 0.2308754 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31614_c0_g1_i1 12.17414086 20.271939 4.07634272 0.20108302 -2.314136831 0.004601925 0.019748077 Down 3.6903 5.024866 3.357919 0.6109658 0.6301138 0.650947 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31618_c0_g1_i1 2.628617229 5.257234457 0 0 #NAME? 0.029657375 0.09333314 Down 0.7030948 0.6819741 1.408944 0 0 0 XP_011074269.1 protein ALP1-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31623_c0_g1_i1 6.947061238 1.389340263 12.50478221 9.000518124 3.170008054 0.006012635 0.02479843 Up 0.2201592 0 0.3328292 1.159512 2.373963 0.8632477 ACL84745.1 "RpS10b-PB, partial [synthetic construct]" O13614|RS10B_SCHPO 40S ribosomal protein S10-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rps1002 PE=3 SV=1 ppp:PHYPADRAFT_176644 K02947 "RP-S10e, RPS10" small subunit ribosomal protein S10e ko03010 Ribosome KOG3344 40s ribosomal protein s10 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG5045 Ribosomal protein Biological Process: ribosomal small subunit assembly (GO:0000028);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF03501.14 Plectin/S10 domain TRINITY_DN31624_c0_g1_i1 7.754170717 15.50834143 0 0 #NAME? 2.11E-05 0.000161215 Down 2.209186 1.805334 1.281472 0 0 0 AAX31966.1 ribosomal protein L12 [synthetic construct] P0CT83|RL12A_SCHPO 60S ribosomal protein L12-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl1201 PE=3 SV=1 mlr:MELLADRAFT_52368 K02870 "RP-L12e, RPL12" large subunit ribosomal protein L12e ko03010 Ribosome KOG0886 40S ribosomal protein S2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0080 This protein binds directly to 23S ribosomal RNA (By similarity) Biological Process: ribosomal large subunit assembly (GO:0000027);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); "PF03946.13,PF00298.18" "Ribosomal protein L11, N-terminal domain|Ribosomal protein L11, RNA binding domain" TRINITY_DN31627_c0_g1_i1 14.70663472 29.41326944 0 0 #NAME? 6.37E-10 9.25E-09 Down 1.735634 2.023551 2.735078 0 0 0 AEK66114.1 NADH dehydrogenase subunit 1 (mitochondrion) [Cloning vector pRS316-1B9] P48898|NU1M_CHOCR NADH-ubiquinone oxidoreductase chain 1 OS=Chondrus crispus OX=2769 GN=ND1 PE=3 SV=1 ota:OstapMp29 K03878 ND1 NADH-ubiquinone oxidoreductase chain 1 ko00190 Oxidative phosphorylation KOG4770 NADH dehydrogenase subunit 1 [C] METABOLISM Energy production and conversion C COG1005 "NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone (By similarity)" Cellular Component: mitochondrial inner membrane (GO:0005743);|Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: respiratory chain (GO:0070469); -- -- TRINITY_DN31630_c0_g1_i1 8.478967374 0.246039046 16.7118957 67.92375439 6.085844299 1.38E-05 0.000108962 Up 0 0 0.1263356 1.161019 1.947409 1.706869 AOQ08826.1 "CG10407-RA, partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111QHV Haemolymph juvenile hormone binding protein (JHBP) -- PF06585.10 Haemolymph juvenile hormone binding protein (JHBP) TRINITY_DN31631_c0_g1_i1 2.593300769 0 5.186601537 Inf Inf 0.022919188 0.075663325 Up 0 0 0 0.7150208 0.9601734 0.633775 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31632_c0_g1_i1 37.31467658 54.47052478 20.15882838 0.370086913 -1.434063974 0.002639737 0.012238338 Down 8.433151 6.476512 7.081324 1.081549 4.45529 1.060617 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31635_c0_g1_i1 21.28208333 33.00191524 9.562251423 0.289748378 -1.787127508 0.041350524 0.121837227 Down 5.407667 1.93359 7.907767 0.7044322 2.185875 0.7482848 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31636_c0_g1_i1 13.38903017 0 26.77806035 Inf Inf 7.27E-10 1.05E-08 Up 0 0 0 1.273753 1.168417 1.350036 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31640_c0_g1_i1 43.67244314 83.64660065 3.698285638 0.044213221 -4.49937835 9.89E-19 2.98E-17 Down 6.543013 8.253953 7.887678 0.1165714 0.4679732 0.2559152 XP_011080440.1 probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Sesamum indicum] Q6JN47|EIX1_SOLLC Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); PF08263.11 Leucine rich repeat N-terminal domain TRINITY_DN31643_c0_g1_i1 8.620484372 2.246036773 14.99493197 6.676173849 2.739021523 0.006287063 0.025736194 Up 0.1867523 0.3588027 0.4228672 1.310481 1.132603 2.482222 ACL86595.1 "RpL35A-PA, partial [synthetic construct]" Q9LMK0|R35A1_ARATH 60S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=1 gsl:Gasu_43860 K02917 "RP-L35Ae, RPL35A" large subunit ribosomal protein L35Ae ko03010 Ribosome KOG0887 60S ribosomal protein L35A/L37 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2451 Ribosomal protein Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Biological Process: ribosomal large subunit biogenesis (GO:0042273); PF01247.17 Ribosomal protein L35Ae TRINITY_DN31648_c0_g1_i1 10.63893668 17.97029069 3.307582659 0.184058384 -2.44176463 0.00567601 0.02360956 Down 4.100385 1.752235 3.193827 1.396129 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31649_c0_g1_i1 6.24625108 12.49250216 0 0 #NAME? 0.000182494 0.001144823 Down 2.72618 1.682762 1.552248 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31653_c0_g1_i1 16.3125092 32.6250184 0 0 #NAME? 9.51E-11 1.52E-09 Down 4.032563 3.480823 2.541221 0 0 0 SJX29074.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" P49693|RL193_ARATH 60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3 bvg:104890341 K02885 "RP-L19e, RPL19" large subunit ribosomal protein L19e ko03010 Ribosome KOG1696 60s ribosomal protein L19 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2147 ribosomal protein L19 Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: polysomal ribosome (GO:0042788); PF01280.19 Ribosomal protein L19e TRINITY_DN31655_c0_g1_i1 15.39310052 0 30.78620105 Inf Inf 2.87E-11 4.86E-10 Up 2.74E-47 0 0 4.378285 5.648214 4.662175 -- -- O65352|1433_HELAN 14-3-3-like protein OS=Helianthus annuus OX=4232 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: protein domain specific binding (GO:0019904); -- -- TRINITY_DN31658_c0_g1_i1 33.67227338 66.98231152 0.362235236 0.005407924 -7.530709466 3.20E-20 1.06E-18 Down 4.713514 4.07144 4.174731 0 0.04073899 0 SJX29346.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" P93099|RL13A_CYAPA 60S ribosomal protein L13a OS=Cyanophora paradoxa OX=2762 PE=2 SV=1 vra:106758138 K02872 "RP-L13Ae, RPL13A" large subunit ribosomal protein L13Ae ko03010 Ribosome KOG3204 60S ribosomal protein L13a [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0102 "This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: large ribosomal subunit (GO:0015934); PF00572.17 Ribosomal protein L13 TRINITY_DN31666_c0_g1_i1 23.06008723 0 46.12017446 Inf Inf 1.51E-16 3.91E-15 Up 0 0 0 2.732574 2.270095 2.670995 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31671_c0_g1_i1 2.408842555 4.817685109 0 0 #NAME? 0.042426381 0.124377468 Down 0.4435665 1.071698 1.037438 4.15E-90 0 0 XP_012857645.1 PREDICTED: putative late blight resistance protein homolog R1A-3 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31678_c0_g1_i1 3.219089511 0 6.438179022 Inf Inf 0.012551711 0.046004023 Up 0 0 0 0.7033715 0.3605367 1.951461 PIN13456.1 hypothetical protein CDL12_13919 [Handroanthus impetiginosus] Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana OX=3702 GN=LOI1 PE=1 SV=1 -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- "PF13041.5,PF01535.19" PPR repeat family|PPR repeat TRINITY_DN31679_c0_g1_i1 14.95422601 27.70339691 2.205055106 0.079595117 -3.651176271 7.58E-06 6.27E-05 Down 4.747529 3.799205 3.945104 0.7577504 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31684_c0_g1_i1 12.54981275 25.0996255 0 0 #NAME? 1.46E-08 1.80E-07 Down 1.202906 1.957061 2.394991 0 0 0 BAG73675.1 "ribosomal protein L5, partial [synthetic construct]" O65353|RL5_HELAN 60S ribosomal protein L5 OS=Helianthus annuus OX=4232 GN=RPL5A PE=2 SV=1 vra:106770768 K02932 "RP-L5e, RPL5" large subunit ribosomal protein L5e ko03010 Ribosome KOG0875 60S ribosomal protein L5 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0256 "This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Molecular Function: 5S rRNA binding (GO:0008097); "PF17144.3,PF14204.5" "Ribosomal large subunit proteins 60S L5, and 50S L18|Ribosomal L18 C-terminal region" TRINITY_DN31686_c0_g1_i1 10.63450404 20.13519615 1.133811929 0.056309952 -4.150466268 4.69E-05 0.000333986 Down 1.519646 1.475636 1.712763 0 0.06333307 0.1420257 SJX48384.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" P34091|RL6_MESCR 60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1 ppl:POSPLDRAFT_110352 K02934 "RP-L6e, RPL6" large subunit ribosomal protein L6e ko03010 Ribosome KOG1694 60s ribosomal protein L6 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2163 (ribosomal) protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); "PF01159.18,PF03868.14" "Ribosomal protein L6e|Ribosomal protein L6, N-terminal domain" TRINITY_DN31687_c0_g1_i1 14.46034306 25.83437934 3.086306774 0.119465102 -3.065338848 0.000146038 0.00093658 Down 5.891969 3.801804 2.650439 0 0 1.232734 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31690_c0_g1_i1 15.15932499 22.6759997 7.642650285 0.337036972 -1.569021234 0.047541715 0.136085731 Down 3.974133 3.827424 1.770146 0.5260482 0 2.080996 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31694_c0_g1_i1 5.42046053 10.84092106 0 0 #NAME? 0.009603359 0.036830457 Down 2.31461 2.220022 0 0 0 0 Q944T2.1 RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP Q944T2|TCTP_SOYBN Translationally-controlled tumor protein homolog OS=Glycine max OX=3847 GN=TCTP PE=2 SV=1 -- -- -- -- -- -- KOG1727 Microtubule-binding protein (translationally controlled tumor protein) [DZ] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning |Cytoskeleton " S ENOG4111FVP tumor protein Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: cytoplasm (GO:0005737); PF00838.16 Translationally controlled tumour protein TRINITY_DN31695_c0_g1_i1 5.690022862 11.38004572 0 0 #NAME? 0.00164249 0.00809792 Down 1.213792 0.5967201 2.825566 0 0 0 CAN72527.1 hypothetical protein VITISV_009255 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YBAH Reverse transcriptase (RNA-dependent DNA polymerase) Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN31696_c0_g1_i1 7.535119867 14.68445139 0.385788347 0.026271894 -5.250335992 0.000186716 0.001169368 Down 2.314944 2.652062 1.984 0 0 0.153575 AAP36575.1 "Homo sapiens thymosin, beta 10, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG4794 Thymosin beta [N] CELLULAR PROCESSES AND SIGNALING Cell motility O ENOG410Y3I4 thymosin beta -- -- -- TRINITY_DN31703_c0_g1_i1 4.422362169 8.844724339 0 0 #NAME? 0.002260775 0.010686594 Down 1.110913 1.6533 1.686265 0 0 0 ABM83650.1 glioma tumor suppressor candidate region gene 2 [synthetic construct] -- -- -- -- -- -- -- -- KOG2823 Cellular protein (glioma tumor suppressor candidate region gene 2) [R] POORLY CHARACTERIZED General function prediction only S ENOG4111GSN Glioma tumor suppressor candidate region gene 2 -- PF07767.10 Nop53 (60S ribosomal biogenesis) TRINITY_DN31712_c0_g1_i1 120.2897169 60.25772309 180.3217106 2.992507871 1.581355042 3.91E-11 6.55E-10 Up 1.415176 1.068739 1.102937 2.424187 3.14135 3.137229 XP_022004529.1 uncharacterized protein LOC110902100 [Helianthus annuus] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG4111SP8 Reverse transcriptase (RNA-dependent DNA polymerase) Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN31720_c0_g1_i1 10.51616677 20.30786307 0.724470471 0.035674382 -4.80896774 1.55E-05 0.000121315 Down 3.109218 2.406742 2.823773 0 0.2816146 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31721_c0_g1_i1 4.463908672 8.927817344 0 0 #NAME? 0.013110077 0.047784305 Down 1.47278 1.420585 0 0 0 0 KHN45115.1 "Branched-chain-amino-acid aminotransferase 2, chloroplastic [Glycine soja]" Q9M439|BCAT2_ARATH "Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCAT2 PE=1 SV=1" gmx:100782644 K00826 "E2.6.1.42, ilvE" branched-chain amino acid aminotransferase ko00290|ko00770|ko00280|ko00270 "Valine, leucine and isoleucine biosynthesis|Pantothenate and CoA biosynthesis|Valine, leucine and isoleucine degradation|Cysteine and methionine metabolism" KOG0975 "Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily" [E] METABOLISM Amino acid transport and metabolism E COG0115 brancheD-chain amino acid aminotransferase Molecular Function: branched-chain-amino-acid transaminase activity (GO:0004084);|Biological Process: isoleucine biosynthetic process (GO:0009097);|Biological Process: leucine biosynthetic process (GO:0009098);|Biological Process: valine biosynthetic process (GO:0009099);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: L-leucine transaminase activity (GO:0052654);|Molecular Function: L-valine transaminase activity (GO:0052655);|Molecular Function: L-isoleucine transaminase activity (GO:0052656);|Biological Process: plant-type cell wall organization or biogenesis (GO:0071669); PF01063.18 Amino-transferase class IV TRINITY_DN31724_c0_g1_i1 69.94366037 139.8873207 0 0 #NAME? 4.21E-44 3.84E-42 Down 8.330367 6.360512 8.55166 0 0 0 PIN18133.1 Serine/threonine protein kinase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31730_c0_g1_i1 3.91086729 0 7.82173458 Inf Inf 0.002817549 0.012962097 Up 0 0 0 0.9396393 1.403263 1.509023 ACL92676.1 "CG8036-PB, partial [synthetic construct]" Q9URM2|TKT_SCHPO Probable transketolase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2G5.05 PE=2 SV=1 yli:YALI0E06479g K00615 "E2.2.1.1, tktA, tktB" transketolase ko00710|ko00030 Carbon fixation in photosynthetic organisms|Pentose phosphate pathway KOG0523 Transketolase [G] METABOLISM Carbohydrate transport and metabolism G COG0021 Transketolase "Molecular Function: transketolase activity (GO:0004802);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: pentose-phosphate shunt (GO:0006098);|Biological Process: pentose-phosphate shunt, non-oxidative branch (GO:0009052);|Molecular Function: metal ion binding (GO:0046872);" "PF00456.20,PF00676.19,PF13292.5" "Transketolase, thiamine diphosphate binding domain|Dehydrogenase E1 component|1-deoxy-D-xylulose-5-phosphate synthase" TRINITY_DN31732_c0_g1_i1 7.644246226 13.08343735 2.205055106 0.168537904 -2.568855007 0.016388398 0.057432144 Down 2.085744 2.732386 2.192504 0.902527 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31733_c0_g1_i1 8.357646947 16.71529389 0 0 #NAME? 3.39E-05 0.00024888 Down 1.566391 2.563328 4.831986 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31734_c0_g1_i1 5.189843874 10.37968775 0 0 #NAME? 0.000759567 0.004085734 Down 1.009327 1.06758 1.067303 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31736_c0_g1_i1 3.408280868 6.816561737 0 0 #NAME? 0.011726686 0.043482228 Down 1.860541 1.35762 0.3633827 0 0 0 XP_012836036.1 PREDICTED: uncharacterized protein LOC105956698 [Erythranthe guttata] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN31737_c0_g1_i1 10.08498215 20.16996429 0 0 #NAME? 2.85E-06 2.54E-05 Down 2.868148 6.361788 2.729956 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31739_c0_g1_i1 14.58496551 0 29.16993101 Inf Inf 9.83E-11 1.57E-09 Up 0 0 0 3.448003 3.884114 2.155188 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31746_c0_g1_i1 42.24090383 12.3510829 72.13072476 5.840032437 2.545976382 2.73E-07 2.84E-06 Up 0.3808025 1.862008 1.168669 5.527993 3.696674 6.844958 AOQ13317.1 CG1746-PF [synthetic construct] Q12635|ATP9M_NEUCR "ATP synthase subunit 9, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=atp-9 PE=3 SV=1" mtm:MYCTH_82981 K02128 "ATPeF0C, ATP5G, ATP9" F-type H+-transporting ATPase subunit c ko00190 Oxidative phosphorylation KOG3025 "Mitochondrial F1F0-ATP synthase, subunit c/ATP9/proteolipid" [C] METABOLISM Energy production and conversion C COG0636 "F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity)" "Cellular Component: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) (GO:0000276);|Molecular Function: lipid binding (GO:0008289);|Biological Process: ATP synthesis coupled proton transport (GO:0015986);|Biological Process: ATP hydrolysis coupled proton transport (GO:0015991);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: proton-transporting ATP synthase complex, coupling factor F(o) (GO:0045263);|Molecular Function: proton-transporting ATP synthase activity, rotational mechanism (GO:0046933);" PF00137.20 ATP synthase subunit C TRINITY_DN31747_c0_g1_i1 30.42973646 50.06110654 10.79836638 0.215703709 -2.212877108 1.06E-05 8.52E-05 Down 5.288832 5.029994 4.013537 0.8960904 0.6623746 0.9263639 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31748_c0_g1_i1 2.465250897 4.930501794 0 0 #NAME? 0.044101696 0.128195972 Down 1.470329 0.417543 0.3242172 0 0 0 AAX36487.1 v-ets erythroblastosis virus E26 oncogene-like 1 [synthetic construct] -- -- -- -- -- -- -- -- KOG3806 Predicted transcription factor [K] INFORMATION STORAGE AND PROCESSING Transcription K ENOG410Z0ZF ets variant -- -- -- TRINITY_DN31751_c0_g1_i1 12.11196925 0.976834689 23.2471038 23.79840118 4.572792749 1.52E-06 1.41E-05 Up 0.3477883 0 0 2.003589 1.234911 3.121696 AOQ06796.1 "RpL9-RA, partial [synthetic construct]" P49210|RL9_ORYSJ 60S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 SV=3 sbi:SORBI_10g000700 K02940 "RP-L9e, RPL9" large subunit ribosomal protein L9e ko03010 Ribosome KOG3255 60S ribosomal protein L9 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0097 "This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center (By similarity)" Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF00347.22 Ribosomal protein L6 TRINITY_DN31756_c0_g1_i1 18.87131242 9.888047361 27.85457747 2.816994747 1.494156873 0.009507765 0.036553397 Up 2.585303 0.4613691 0.5397502 3.441274 2.198508 2.500635 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31757_c0_g1_i1 8.98392822 0 17.96785644 Inf Inf 0.000637042 0.003497915 Up 0 0 0 5.187981 3.323914 0.6771098 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31761_c0_g1_i1 4.908660159 9.817320318 0 0 #NAME? 0.012644192 0.046298122 Down 1.122286 3.289698 0.4488415 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31762_c0_g1_i1 9.641010062 19.28202012 0 0 #NAME? 1.49E-06 1.39E-05 Down 3.279416 2.487939 1.449905 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF14318.5 Mononegavirales mRNA-capping region V TRINITY_DN31763_c0_g1_i1 12.13556824 18.65164038 5.619496106 0.301286964 -1.730789842 0.028813018 0.091292603 Down 2.79894 2.323162 1.819175 0.4051861 0.4045987 0.8062282 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31766_c0_g1_i1 10.41137311 20.82274622 0 0 #NAME? 4.60E-07 4.64E-06 Down 3.080704 3.745449 2.058833 0 0 0 XP_018626855.1 PREDICTED: uncharacterized protein LOC108945395 [Nicotiana tomentosiformis] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN31783_c0_g1_i1 8.337565884 14.45461413 2.220517635 0.153619987 -2.702562162 0.007695246 0.030609035 Down 1.131819 0.9603177 1.523704 0 0.3162239 0.1561305 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31785_c0_g1_i1 5.831722195 1.555806791 10.1076376 6.496717754 2.699711029 0.035824304 0.108788643 Up 0.09137885 0 0.3471438 0.3347894 0.793933 1.107325 EPS69582.1 "heat shock protein hsp70, partial [Genlisea aurea]" P26413|HSP70_SOYBN Heat shock 70 kDa protein OS=Glycine max OX=3847 GN=HSP70 PE=3 SV=1 sind:105162907 K03283 HSPA1_8 heat shock 70kDa protein 1/2/6/8 ko04141|ko03040|ko04144 Protein processing in endoplasmic reticulum|Spliceosome|Endocytosis KOG0101 "Molecular chaperones HSP70/HSC70, HSP70 superfamily" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0443 Heat shock protein "Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: response to unfolded protein (GO:0006986);|Molecular Function: ATPase activity (GO:0016887);|Molecular Function: heat shock protein binding (GO:0031072);|Biological Process: cellular response to heat (GO:0034605);|Biological Process: cellular response to unfolded protein (GO:0034620);|Biological Process: protein refolding (GO:0042026);|Molecular Function: ATPase activity, coupled (GO:0042623);|Molecular Function: protein binding involved in protein folding (GO:0044183);|Molecular Function: unfolded protein binding (GO:0051082);|Biological Process: chaperone cofactor-dependent protein refolding (GO:0051085);|Molecular Function: misfolded protein binding (GO:0051787);" PF00012.19 Hsp70 protein TRINITY_DN31791_c0_g1_i1 6.308220672 12.61644134 0 0 #NAME? 0.000899595 0.004751056 Down 1.94652 0.5554074 3.311142 0 0 0 PIN08550.1 Cellulose synthase (UDP-forming) [Handroanthus impetiginosus] Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana OX=3702 GN=CSLG2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: plant-type primary cell wall biogenesis (GO:0009833);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: cellulose synthase activity (GO:0016759);|Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);|Biological Process: cellulose biosynthetic process (GO:0030244);|Biological Process: cell wall organization (GO:0071555); PF03552.13 Cellulose synthase TRINITY_DN31796_c0_g1_i1 17.40424449 32.61925571 2.18923326 0.067114752 -3.897226279 1.21E-06 1.14E-05 Down 4.122542 2.502808 1.991599 0.2273011 0.2271755 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31802_c0_g1_i1 13.7159247 3.288922092 24.1429273 7.340680815 2.875913873 0.00017159 0.001082101 Up 0.2865169 0.2755928 0.1595648 1.521813 1.33259 1.361711 ACL90856.1 sop-PA [synthetic construct] Q9SCM3|RS24_ARATH 40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1 ppp:PHYPADRAFT_196764 K02981 "RP-S2e, RPS2" small subunit ribosomal protein S2e ko03010 Ribosome KOG0877 40S ribosomal protein S2/30S ribosomal protein S5 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0098 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body (By similarity) Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); "PF00333.19,PF03719.14" "Ribosomal protein S5, N-terminal domain|Ribosomal protein S5, C-terminal domain" TRINITY_DN31804_c0_g1_i1 15.88139049 26.19812235 5.564658619 0.212406773 -2.235098327 0.004777996 0.020403347 Down 1.384121 4.317587 2.899534 0.7236021 0.3666513 0.3645787 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31807_c0_g1_i1 129.7711249 202.3389736 57.20327617 0.282710123 -1.822604551 1.63E-05 0.000127312 Down 27.76052 50.84136 49.23421 8.053129 8.136116 13.17222 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31808_c0_g1_i1 9.548642559 0 19.09728512 Inf Inf 3.56E-07 3.65E-06 Up 0 0 0 1.027903 1.50002 2.410651 AOQ12481.1 Ca-P60A-PC [synthetic construct] Q9SY55|ECA3_ARATH "Calcium-transporting ATPase 3, endoplasmic reticulum-type OS=Arabidopsis thaliana OX=3702 GN=ECA3 PE=2 SV=3" -- -- -- -- -- -- KOG0202 Ca2+ transporting ATPase [P] METABOLISM Inorganic ion transport and metabolism P COG0474 P-type atpase "Cellular Component: Golgi membrane (GO:0000139);|Molecular Function: calcium-transporting ATPase activity (GO:0005388);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: endosome (GO:0005768);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Biological Process: calcium ion transport (GO:0006816);|Biological Process: cellular calcium ion homeostasis (GO:0006874);|Molecular Function: proton-exporting ATPase activity, phosphorylative mechanism (GO:0008553);|Cellular Component: endomembrane system (GO:0012505);|Molecular Function: manganese-transporting ATPase activity (GO:0015410);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: late endosome membrane (GO:0031902);|Cellular Component: sarcoplasmic reticulum membrane (GO:0033017);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: root development (GO:0048364);|Biological Process: manganese ion homeostasis (GO:0055071);|Biological Process: calcium ion transmembrane transport (GO:0070588);" PF00689.20 "Cation transporting ATPase, C-terminus" TRINITY_DN31809_c0_g1_i1 5.551580949 11.1031619 0 0 #NAME? 0.000509893 0.002872373 Down 3.110791 2.156608 1.421973 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31811_c0_g1_i1 2.194507208 0 4.389014417 Inf Inf 0.044401034 0.128876279 Up 0 0 0 0.8326214 0.4628329 0 OSS45576.1 hypothetical protein B5807_09468 [Epicoccum nigrum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4112A8B NA -- -- -- TRINITY_DN31812_c0_g1_i1 7.526147252 12.42489273 2.627401778 0.211462733 -2.241524659 0.033777731 0.103859143 Down 1.917548 2.3616 1.497777 0.5123056 0 0.5132929 XP_003604991.1 sterol 3-beta-glucosyltransferase UGT80A2 [Medicago truncatula] Q9M8Z7|U80A2_ARATH Sterol 3-beta-glucosyltransferase UGT80A2 OS=Arabidopsis thaliana OX=3702 GN=UGT80A2 PE=1 SV=1 mtr:MTR_4g022610 K05841 E2.4.1.173 sterol 3beta-glucosyltransferase -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Cellular Component: plasma membrane (GO:0005886);|Biological Process: carbohydrate metabolic process (GO:0005975);|Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Cellular Component: membrane (GO:0016020);|Biological Process: sterol metabolic process (GO:0016125);|Biological Process: sterol biosynthetic process (GO:0016126);|Molecular Function: sterol 3-beta-glucosyltransferase activity (GO:0016906);|Biological Process: lipid glycosylation (GO:0030259);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Biological Process: seed development (GO:0048316);|Molecular Function: beta-sitosterol UDP-glucosyltransferase activity (GO:0051507);|Molecular Function: soladodine glucosyltransferase activity (GO:0102202);|Molecular Function: brassicasterol glucosyltransferase activity (GO:0102203);|Molecular Function: cholesterol allpha-glucosyltransferase activity (GO:0102205); -- -- TRINITY_DN31813_c0_g1_i1 9.051780109 16.29238404 1.811176178 0.111167044 -3.169198934 0.018485215 0.0635169 Down 3.225481 0.6334852 4.707183 3.94E-72 0.8239443 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31816_c0_g1_i1 5.590848705 0 11.18169741 Inf Inf 0.000191895 0.001197014 Up 0 0 0 2.193165 0.7218584 1.666767 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31817_c0_g1_i1 12.72924062 25.45848123 0 0 #NAME? 1.24E-08 1.55E-07 Down 4.830725 4.664348 5.901907 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31823_c0_g1_i1 4.632880445 0 9.26576089 Inf Inf 0.000868737 0.004605768 Up 0 0 0 1.836288 0.8254098 0.8706354 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31830_c0_g1_i1 7.24392915 14.4878583 0 0 #NAME? 3.90E-05 0.000282368 Down 2.046002 0.8966754 1.587695 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31832_c0_g1_i1 4.742871018 1.275402478 8.210339559 6.437449905 2.6864893 0.04349364 0.126859012 Up 0.3428956 0.3347902 0 1.451294 0.5685799 1.220303 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31833_c0_g1_i1 5.584387413 11.16877483 0 0 #NAME? 0.000418413 0.002413037 Down 0.6777753 3.29008 2.158336 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31834_c0_g1_i1 2.572427738 5.144855477 0 0 #NAME? 0.03383117 0.103981196 Down 1.742668 0 1.382662 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00946.18 Mononegavirales RNA dependent RNA polymerase TRINITY_DN31838_c0_g1_i1 7.984573035 0 15.96914607 Inf Inf 4.06E-06 3.52E-05 Up 0 0 0 1.602696 2.286598 2.051651 AOQ13387.1 CG15449-PA [synthetic construct] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41128VR NA -- -- -- TRINITY_DN31839_c0_g1_i1 15.18349655 0.492078091 29.87491502 60.7117357 5.923903514 3.68E-09 4.91E-08 Up 0 0 0.1521918 2.214193 1.728454 2.779661 ACL86329.1 "Mlc2-PA, partial [synthetic construct]" Q0IUU4|CML2_ORYSJ Putative calmodulin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CML2 PE=3 SV=2 -- -- -- -- -- -- KOG0031 "Myosin regulatory light chain, EF-Hand protein superfamily" [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton DTZ COG5126 Calcium-binding protein Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: nucleus (GO:0005634);|Cellular Component: membrane (GO:0016020);|Biological Process: calcium-mediated signaling (GO:0019722); "PF13405.5,PF00036.31,PF13833.5,PF13499.5" EF-hand domain|EF hand|EF-hand domain pair|EF-hand domain pair TRINITY_DN31841_c0_g1_i1 7.256028353 1.881418354 12.63063835 6.713359804 2.747034966 0.013829273 0.049964358 Up 0.1987616 0 0.4596394 1.536434 0.8565121 1.114657 XP_020413984.1 uncharacterized protein LOC109947676 [Prunus persica] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN31846_c0_g1_i1 3.576087349 7.152174698 0 0 #NAME? 0.007222795 0.02900171 Down 1.021729 0.3929386 1.71878 0 0 0 XP_014517361.1 uncharacterized protein LOC106774844 [Vigna radiata var. radiata] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- -- -- TRINITY_DN31850_c0_g1_i1 2.61685388 0 5.23370776 Inf Inf 0.022544944 0.074704915 Up 0 0 0 0.6611088 0.6658778 0.9555061 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31851_c0_g1_i1 4.71128767 9.42257534 0 0 #NAME? 0.001614743 0.007974981 Down 1.735923 1.163264 1.138355 0 0 0 XP_020553896.1 ankyrin repeat-containing protein At5g02620 isoform X1 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG0504 FOG: Ankyrin repeat [R] POORLY CHARACTERIZED General function prediction only S COG0666 Ankyrin Repeat -- -- -- TRINITY_DN31853_c0_g1_i1 13.52698884 0.976834689 26.07714299 26.6955538 4.738527573 1.96E-07 2.08E-06 Up 0.3459786 0 0 2.69879 2.132342 2.857851 RDA83275.1 hypothetical protein CP532_0979 [Ophiocordyceps sp. 'camponoti-leonardi'] Q7RV88|IF4A_NEUCR ATP-dependent RNA helicase eIF4A OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=tif-1 PE=3 SV=2 cthr:CTHT_0067210 K03257 EIF4A translation initiation factor 4A ko03013 RNA transport KOG0327 "Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases" [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " L COG0513 purine NTP-dependent helicase activity Molecular Function: translation initiation factor activity (GO:0003743);|Molecular Function: ATP-dependent RNA helicase activity (GO:0004004);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737); "PF00270.28,PF04851.14" "DEAD/DEAH box helicase|Type III restriction enzyme, res subunit" TRINITY_DN31854_c0_g1_i1 35.61999572 21.01625653 50.22373491 2.389756465 1.256863604 0.002898909 0.013270491 Up 2.693707 2.852429 1.919679 5.000674 5.898795 3.311489 EYU40788.1 "hypothetical protein MIMGU_mgv1a025902mg, partial [Erythranthe guttata]" P86809|NLTP2_APIGA Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG410YV7D nonspecific lipid-transfer protein Biological Process: lipid transport (GO:0006869);|Molecular Function: lipid binding (GO:0008289); -- -- TRINITY_DN31855_c0_g1_i1 8.309400682 16.61880136 0 0 #NAME? 0.006935247 0.028023114 Down 1.805779 5.325977 0.6912233 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31856_c0_g1_i1 4.170902133 8.341804265 0 0 #NAME? 0.003883388 0.017043303 Down 0.6660718 0.9753558 2.618507 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31858_c0_g1_i1 11.22752754 20.64387891 1.811176178 0.087734296 -3.510715281 0.000190009 0.001187699 Down 2.053568 3.972389 2.748265 0 0.5575942 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31859_c0_g1_i1 6.760713945 13.52142789 0 0 #NAME? 7.65E-05 0.000520348 Down 1.356254 3.244563 2.356476 0 0 0 ABF98081.1 "retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]" P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN31861_c0_g1_i1 6.127553739 11.14484866 1.110258818 0.099620807 -3.327409091 0.009277375 0.035816286 Down 1.640856 1.162501 1.809438 0 0.2396201 0.1394689 AAX29387.1 "ribosomal protein L29, partial [synthetic construct]" Q9M7X7|RL291_ARATH 60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1 vcn:VOLCADRAFT_85396 K02905 "RP-L29e, RPL29" large subunit ribosomal protein L29e ko03010 Ribosome KOG3504 60S ribosomal protein L29 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J ENOG4112428 ribosomal protein l29 Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF01779.16 Ribosomal L29e protein family TRINITY_DN31864_c0_g1_i1 13.46915518 6.431099936 20.50721042 3.188756297 1.672993843 0.014034677 0.050550794 Up 2.60134 1.024557 0 2.9898 2.945618 3.869953 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31868_c0_g1_i1 5.752740638 1.476234274 10.029247 6.793804466 2.764219696 0.036519571 0.110412474 Up 0 0 0.4331404 0.5981364 1.001655 0.8936252 XP_019184899.1 PREDICTED: anthocyanin 5-aromatic acyltransferase-like [Ipomoea nil] Q9ZWR8|ANTA_GENTR Anthocyanin 5-aromatic acyltransferase OS=Gentiana triflora OX=55190 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Cellular Component: cytoplasm (GO:0005737);|Molecular Function: anthocyanin 5-aromatic acyltransferase activity (GO:0047183);|Molecular Function: caffeoyl-CoA:pelargonidin-3,5-diglucoside 5-O-glucoside-6-O-hydroxycinnamoyltransferase activity (GO:0102777);|Molecular Function: caffeoyl-CoA:delphinidin-3,5-diglucoside 5-O-glucoside-6-O-hydroxycinnamoyltransferase activity (GO:0102815);" PF02458.14 Transferase family TRINITY_DN31871_c0_g1_i1 4.178380758 0.897262171 7.459499344 8.31362291 3.055477311 0.043402857 0.126675618 Up 0.2942709 0 0.1106451 0.5876933 0.7003996 0.925184 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31872_c0_g1_i1 5.67920524 1.714951826 9.643458655 5.623165917 2.491382616 0.042763798 0.125162227 Up 0.3771274 0 0.2965662 0.8668315 1.281683 1.085488 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31873_c0_g1_i1 13.50041421 0.984156182 26.01667223 26.43551166 4.724405345 6.24E-07 6.18E-06 Up 0 0 0.4862471 2.729268 4.233044 3.902309 AOQ12423.1 RpL36-PA [synthetic construct] Q9LRB8|RL36_ULVCO 60S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1 sita:101785624 K02920 "RP-L36e, RPL36" large subunit ribosomal protein L36e ko03010 Ribosome KOG3452 60S ribosomal protein L36 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG5051 60S ribosomal protein l36 Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF01158.17 Ribosomal protein L36e TRINITY_DN31879_c0_g1_i1 5.592077363 0 11.18415473 Inf Inf 0.000191727 0.001196432 Up 0 0 0 1.205609 0.875396 1.267723 PIN15078.1 Multicopper oxidase [Handroanthus impetiginosus] P29162|ASOL_TOBAC L-ascorbate oxidase homolog OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase Molecular Function: copper ion binding (GO:0005507);|Cellular Component: extracellular space (GO:0005615);|Molecular Function: oxidoreductase activity (GO:0016491); PF00394.21 Multicopper oxidase TRINITY_DN31885_c0_g1_i1 11.69863299 2.373496445 21.02376953 8.857721097 3.146935572 0.000520349 0.002926241 Up 0.2668245 0 0.6221651 1.538501 1.300953 3.117926 XP_012847401.1 "PREDICTED: putative disease resistance protein RGA3, partial [Erythranthe guttata]" Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Biological Process: defense response (GO:0006952);|Molecular Function: ADP binding (GO:0043531); -- -- TRINITY_DN3188_c0_g1_i1 10.91146164 0 21.82292328 Inf Inf 3.61E-08 4.24E-07 Up 0 0 0 1.206275 1.149123 0.8007115 ACK77585.1 polymerase [Recombinant vesicular stomatitis Indiana virus rVSV-G/GFP] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF14318.5 Mononegavirales mRNA-capping region V TRINITY_DN31891_c0_g1_i1 2.993235648 5.986471296 0 0 #NAME? 0.018227325 0.062743076 Down 0.3602701 1.730372 1.120382 0 0 0 CAN78022.1 hypothetical protein VITISV_015518 [Vitis vinifera] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN31894_c0_g1_i1 5.971363103 0 11.94272621 Inf Inf 0.000105099 0.000693424 Up 0 0 0 2.395418 1.220134 2.479195 XP_011073426.1 nuclear valosin-containing protein-like [Sesamum indicum] -- -- -- -- -- -- -- -- KOG0737 AAA+-type ATPase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0464 Aaa atpase -- -- -- TRINITY_DN31903_c0_g1_i1 20.5349054 32.78108065 8.288730158 0.252851035 -1.983640413 0.00111815 0.005765758 Down 6.500752 3.247814 3.85363 0.8266384 0.4127398 1.603102 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31904_c0_g1_i1 4.631406781 0.651223126 8.611590435 13.22371718 3.725055869 0.01219528 0.044918887 Up 0.3126717 0 0 0.5301183 1.058545 1.675756 XP_012839271.1 PREDICTED: uncharacterized protein LOC105959677 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31906_c0_g1_i1 10.09450159 20.18900318 0 0 #NAME? 0.007050001 0.028428597 Down 4.214468 2.563469 0 0 0 0 KHN19334.1 Snakin-2 [Glycine soja] P46687|GASA3_ARATH Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YXYH Gibberellin regulated protein Cellular Component: extracellular region (GO:0005576);|Biological Process: response to gibberellin (GO:0009739);|Biological Process: gibberellic acid mediated signaling pathway (GO:0009740); PF02704.13 Gibberellin regulated protein TRINITY_DN31907_c0_g1_i1 7.35574758 14.71149516 0 0 #NAME? 3.54E-05 0.000258378 Down 2.780025 2.658575 2.134374 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31909_c0_g1_i1 3.854621486 0 7.709242972 Inf Inf 0.002932592 0.013397662 Up 0 0 0 0.7506917 1.482046 0.3964964 XP_011087740.1 transcription factor bHLH100 [Sesamum indicum] F4I8F9|BH160_ARATH Transcription factor bHLH160 OS=Arabidopsis thaliana OX=3702 GN=BHLH160 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG4111A1M HLH "Molecular Function: RNA polymerase II regulatory region sequence-specific DNA binding (GO:0000977);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: regulation of transcription by RNA polymerase II (GO:0006357);|Molecular Function: transcription factor binding (GO:0008134);|Molecular Function: protein dimerization activity (GO:0046983);|Biological Process: cellular response to copper ion (GO:0071280);|Cellular Component: RNA polymerase II transcription factor complex (GO:0090575);" PF00010.25 Helix-loop-helix DNA-binding domain TRINITY_DN31910_c0_g1_i1 14.26264056 24.66739765 3.857883467 0.156396046 -2.676724052 0.001268436 0.006444831 Down 2.499892 5.583097 6.562154 0 0 1.887823 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31918_c0_g1_i1 10.63754962 21.27509924 0 0 #NAME? 0.004397791 0.018999614 Down 3.507371 4.913767 0 0 0 0 ACU14863.1 unknown [Glycine max] P15642|PRP3_SOYBN Repetitive proline-rich cell wall protein 3 OS=Glycine max OX=3847 GN=PRP3 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: structural constituent of cell wall (GO:0005199);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Biological Process: multicellular organism development (GO:0007275); -- -- TRINITY_DN31921_c0_g1_i1 16.08341412 27.53736808 4.629460161 0.168115564 -2.572474802 0.007729841 0.030717033 Down 6.758141 2.962609 3.015979 0 0 1.740072 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31925_c0_g1_i1 3.990666205 0 7.981332409 Inf Inf 0.026945123 0.086415147 Up 0 0 0 0.7284703 0.3744848 2.851685 XP_021833053.1 glutathione S-transferase U17-like [Prunus avium] Q9FUS8|GSTUH_ARATH Glutathione S-transferase U17 OS=Arabidopsis thaliana OX=3702 GN=GSTU17 PE=2 SV=1 pmum:103321654 K00799 "GST, gst" glutathione S-transferase ko00480 Glutathione metabolism KOG0406 Glutathione S-transferase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XSIX glutathione Stransferase Molecular Function: glutathione transferase activity (GO:0004364);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: glutathione metabolic process (GO:0006749);|Biological Process: toxin catabolic process (GO:0009407);|Cellular Component: chloroplast (GO:0009507);|Biological Process: response to salt stress (GO:0009651);|Biological Process: de-etiolation (GO:0009704);|Biological Process: regulation of growth (GO:0040008);|Biological Process: lateral root development (GO:0048527);|Biological Process: response to growth hormone (GO:0060416);|Biological Process: negative regulation of response to water deprivation (GO:0080148);|Biological Process: response to karrikin (GO:0080167); "PF02798.19,PF13417.5,PF13409.5,PF17172.3" "Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, N-terminal domain|Glutathione S-transferase N-terminal domain" TRINITY_DN31928_c0_g1_i1 15.98202121 30.49400569 1.470036737 0.0482074 -4.37460156 0.000692833 0.003770052 Down 1.95135 6.335669 2.997004 0.4195972 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31929_c0_g1_i1 2.916763327 5.833526655 0 0 #NAME? 0.021191422 0.070992047 Down 0.552133 1.264119 0.714729 0 0 0 XP_019257718.1 PREDICTED: uncharacterized protein LOC109235930 [Nicotiana attenuata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z5MF NA -- PF14111.5 Domain of unknown function (DUF4283) TRINITY_DN31933_c0_g1_i1 17.35963323 34.71926646 0 0 #NAME? 5.33E-07 5.33E-06 Down 7.462575 2.196326 5.522747 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31939_c0_g1_i1 2.457710551 4.915421103 0 0 #NAME? 0.044377335 0.12881573 Down 0.7883446 1.929597 0.3132532 0 0 0 PIN08550.1 Cellulose synthase (UDP-forming) [Handroanthus impetiginosus] A2ZAK8|CSLD1_ORYSI Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica OX=39946 GN=CSLD1 PE=3 SV=2 -- -- -- -- -- -- -- -- -- -- -- M COG1215 "Glycosyl transferase, family 2" Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);|Biological Process: cellulose biosynthetic process (GO:0030244);|Biological Process: cell wall organization (GO:0071555); PF03552.13 Cellulose synthase TRINITY_DN31940_c0_g1_i1 3.454419609 0 6.908839219 Inf Inf 0.044809511 0.129812888 Up 0 0 0 0.848116 2.577439 0 CDP12833.1 unnamed protein product [Coffea canephora] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31941_c0_g1_i1 5.990350895 11.98070179 0 0 #NAME? 0.000248001 0.001508849 Down 2.195266 2.126188 1.966438 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31949_c0_g1_i1 4.662756504 0 9.325513009 Inf Inf 0.000850482 0.00452484 Up 0 0 0 0.4392591 2.225316 2.079182 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31950_c0_g1_i1 24.88771026 0 49.77542052 Inf Inf 5.56E-15 1.28E-13 Up 0 0 0 5.370173 3.721347 7.515367 ACL91850.1 PebIII-PA [synthetic construct] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XTWW "Insect pheromone-binding family, A10/OS-D" -- PF03392.12 "Insect pheromone-binding family, A10/OS-D" TRINITY_DN31959_c0_g1_i1 3.495954281 6.991908563 0 0 #NAME? 0.00913692 0.03534619 Down 2.316303 0.4493517 1.445205 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3195_c0_g1_i1 16.00535783 31.2862452 0.724470471 0.023156197 -5.432457827 1.12E-08 1.40E-07 Down 5.285325 3.945306 4.970118 7.77E-28 0.2631818 6.10E-44 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31964_c0_g1_i1 6.485529183 12.97105837 0 0 #NAME? 0.000125117 0.000812739 Down 2.739596 1.94905 1.879809 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31968_c0_g1_i1 5.446523462 10.89304692 0 0 #NAME? 0.00340156 0.015216698 Down 3.462308 0.4813482 1.887665 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31969_c0_g1_i1 11.45827829 22.91655658 0 0 #NAME? 6.80E-08 7.68E-07 Down 1.432722 0.9273013 2.197889 0 0 0 ABM87499.1 "poly(A) binding protein, cytoplasmic 1, partial [synthetic construct]" A5DM21|PABP_PICGU "Polyadenylate-binding protein, cytoplasmic and nuclear OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=PAB1 PE=3 SV=2" gtr:GLOTRDRAFT_114568 K13126 PABPC polyadenylate-binding protein ko03018|ko03015|ko03013 RNA degradation|mRNA surveillance pathway|RNA transport KOG0123 Polyadenylate-binding protein (RRM superfamily) [AJ] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING "RNA processing and modification |Translation, ribosomal structure and biogenesis " S ENOG410XR5X "poly(A) binding protein, cytoplasmic" Cellular Component: nucleus (GO:0005634);|Cellular Component: ribosome (GO:0005840);|Biological Process: mRNA processing (GO:0006397);|Biological Process: regulation of translational initiation (GO:0006446);|Molecular Function: poly(A) binding (GO:0008143);|Molecular Function: ribonuclease inhibitor activity (GO:0008428);|Cellular Component: cytoplasmic stress granule (GO:0010494);|Molecular Function: protein kinase A catalytic subunit binding (GO:0034236);|Biological Process: mRNA transport (GO:0051028);|Biological Process: regulation of nuclear-transcribed mRNA poly(A) tail shortening (GO:0060211);|Molecular Function: promoter-specific chromatin binding (GO:1990841); PF00076.21 "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" TRINITY_DN31970_c0_g1_i1 3.806447655 0.492078091 7.12081722 14.47090888 3.855083631 0.032757535 0.101346973 Up 0 0 0.3384826 0.8261577 0.8372566 1.760873 AOQ06705.1 "ATPCL-RD, partial [synthetic construct]" Q8X097|ACL1_NEUCR Probable ATP-citrate synthase subunit 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=B14D6.310 PE=3 SV=1 pno:SNOG_06832 K01648 ACLY ATP citrate (pro-S)-lyase ko00020 Citrate cycle (TCA cycle) KOG1254 ATP-citrate lyase [C] METABOLISM Energy production and conversion C COG0074 Succinyl-CoA ligase ADP-forming subunit alpha Molecular Function: ATP citrate synthase activity (GO:0003878);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytosol (GO:0005829);|Biological Process: acetyl-CoA biosynthetic process (GO:0006085);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Cellular Component: citrate lyase complex (GO:0009346);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: cofactor binding (GO:0048037); -- -- TRINITY_DN3197_c0_g1_i1 11.36923093 4.391657649 18.34680422 4.177649008 2.062691287 0.011233832 0.041914956 Up 0.3964046 0.7642334 0.447043 1.57773 1.248049 2.584966 PIN08149.1 hypothetical protein CDL12_19277 [Handroanthus impetiginosus] Q5M750|VQ4_ARATH VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YVV0 VQ motif-containing protein Cellular Component: nucleus (GO:0005634);|Biological Process: defense response (GO:0006952);|Biological Process: negative regulation of DNA-binding transcription factor activity (GO:0043433);|Biological Process: negative regulation of cellular defense response (GO:0051245); PF05678.13 VQ motif TRINITY_DN31980_c0_g1_i1 2.581524213 0 5.163048426 Inf Inf 0.023109635 0.076151451 Up 0 0 0 0.6602813 1.12614 0.5128301 ACL89088.1 Gasp-PA [synthetic construct] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XQ49 Chitin binding Peritrophin-A domain -- PF01607.23 Chitin binding Peritrophin-A domain TRINITY_DN31982_c0_g1_i1 5.261746443 1.628057814 8.895435073 5.463832423 2.449913236 0.043010135 0.125739619 Up 0.9443738 4.75E-106 0 1.222252 1.691197 1.315267 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31983_c0_g1_i1 5.488411664 10.97682333 0 0 #NAME? 0.000494684 0.00279746 Down 1.482367 2.589784 2.017566 0 0 0 ABM85309.1 "ribosomal protein S9, partial [synthetic construct]" P52810|RS9_PODAS 40S ribosomal protein S9 OS=Podospora anserina OX=5145 GN=RPS9 PE=3 SV=1 ani:AN4803.2 K02997 "RP-S9e, RPS9" small subunit ribosomal protein S9e ko03010 Ribosome KOG3301 Ribosomal protein S4 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0522 "One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: small ribosomal subunit (GO:0015935);|Molecular Function: rRNA binding (GO:0019843); PF00163.18 Ribosomal protein S4/S9 N-terminal domain TRINITY_DN31984_c0_g1_i1 17.58760773 0 35.17521547 Inf Inf 8.42E-13 1.64E-11 Up 0 0 0 2.430847 2.695842 2.006011 AOQ06290.1 "Cyp1-RA, partial [synthetic construct]" P0C1H7|PPIA1_RHIO9 Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=cyp2 PE=3 SV=1 -- -- -- -- -- -- KOG0865 Cyclophilin type peptidyl-prolyl cis-trans isomerase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0652 peptidyl-prolyl cis-trans isomerase activity Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein folding (GO:0006457); PF00160.20 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TRINITY_DN31986_c0_g1_i1 6.229721779 11.71141998 0.748023582 0.063871297 -3.968688445 0.033403289 0.102902986 Down 0.2060056 1.41953 3.155965 0 0.153021 0.179145 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN31993_c0_g1_i1 20.52804017 29.21284052 11.84323981 0.405412127 -1.30253885 0.028865959 0.09138873 Down 2.433785 5.092119 2.569312 1.220288 1.206419 0.8812561 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32004_c0_g1_i1 4.61055691 8.853604637 0.367509184 0.041509555 -4.590412741 0.00740515 0.029597778 Down 1.121954 0.4640693 1.733488 0.1547904 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32005_c0_g1_i1 5.482430122 10.96486024 0 0 #NAME? 0.000497291 0.002809051 Down 1.374167 1.111241 1.348847 0 0 0 XP_015387832.1 uncharacterized protein LOC107177859 [Citrus sinensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32008_c0_g1_i1 2.963310529 5.926621059 0 0 #NAME? 0.020360673 0.068753774 Down 1.097387 1.476307 0.8718616 0 0 0 GAU37038.1 hypothetical protein TSUD_207440 [Trifolium subterraneum] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF00665.25 Integrase core domain TRINITY_DN32011_c0_g1_i1 18.68790615 37.3758123 0 0 #NAME? 1.94E-12 3.66E-11 Down 2.765583 2.421248 3.853423 0 0 0 AAH30161.1 ribosomal protein S3A [synthetic construct] A8HS48|RS3A_CHLRE 40S ribosomal protein S3a OS=Chlamydomonas reinhardtii OX=3055 GN=CHLREDRAFT_168484 PE=3 SV=1 cre:CHLREDRAFT_168484 K02984 "RP-S3Ae, RPS3A" small subunit ribosomal protein S3Ae ko03010 Ribosome KOG1628 40S ribosomal protein S3A [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1890 Ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF01015.17 Ribosomal S3Ae family TRINITY_DN32019_c0_g1_i1 24.26334467 15.44649469 33.08019465 2.14159881 1.098688243 0.036152983 0.109552227 Up 0.9520492 3.632383 1.818021 3.622457 3.574828 3.747919 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32034_c0_g1_i1 14.12992599 23.40947525 4.850376729 0.207197157 -2.270923884 0.002564853 0.011928932 Down 5.699302 4.324403 3.626713 0 1.22804 1.187471 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32035_c0_g1_i1 11.03270087 18.44304939 3.622352355 0.196407453 -2.348078419 0.008336806 0.032730726 Down 3.201643 5.590464 2.494798 0 1.707037 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32036_c0_g1_i1 8.177097981 16.35419596 0 0 #NAME? 9.60E-06 7.79E-05 Down 2.554879 2.533566 2.995948 0 0 0 SJX25884.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" Q07760|RL23_TOBAC 60S ribosomal protein L23 OS=Nicotiana tabacum OX=4097 GN=RPL23 PE=2 SV=1 ppp:PHYPADRAFT_203515 K02894 "RP-L23e, RPL23" large subunit ribosomal protein L23e ko03010 Ribosome KOG0901 60S ribosomal protein L14/L17/L23 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0093 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF00238.18 Ribosomal protein L14p/L23e TRINITY_DN32037_c0_g1_i1 3.024719571 6.049439142 0 0 #NAME? 0.021746504 0.072445255 Down 1.525498 0 1.981759 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32040_c0_g1_i1 3.002642227 0 6.005284453 Inf Inf 0.012309756 0.045278079 Up 0 0 0 0.496076 0.4976823 1.082591 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32041_c0_g1_i1 3.470241456 0 6.940482912 Inf Inf 0.013446257 0.048790245 Up 0 0 0 2.055673 1.508389 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF05821.10 NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) TRINITY_DN32047_c0_g1_i1 12.76883314 21.15919977 4.378466519 0.206929684 -2.272787482 0.015518638 0.054909776 Down 5.092993 5.8775 1.580096 1.071895 1.082699 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32048_c0_g1_i1 13.32729031 19.85170905 6.802871574 0.342684429 -1.545047456 0.035439077 0.107862913 Down 4.449684 1.718839 3.777379 0 0.9088768 1.880493 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32058_c0_g1_i1 13.05929233 26.11858466 0 0 #NAME? 7.27E-09 9.34E-08 Down 3.587578 2.425023 4.40777 0 0 0 AAX29372.1 "ribosomal protein S11, partial [synthetic construct]" P0CX47|RS11A_YEAST 40S ribosomal protein S11-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPS11A PE=1 SV=1 lth:KLTH0C07810g K02949 "RP-S11e, RPS11" small subunit ribosomal protein S11e ko03010 Ribosome KOG1728 40S ribosomal protein S11 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0186 "One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal" "Biological Process: ribosomal small subunit assembly (GO:0000028);|Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);" "PF16205.4,PF00366.19" Ribosomal_S17 N-terminal|Ribosomal protein S17 TRINITY_DN32059_c0_g1_i1 2.435886329 4.871772657 0 0 #NAME? 0.041435594 0.122032435 Down 1.039978 0.3381724 0.9279885 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3205_c0_g2_i1 37.81296252 60.29476826 15.33115678 0.2542701 -1.975566269 6.06E-06 5.10E-05 Down 8.270807 5.753244 8.000826 1.586064 1.007839 1.996083 EYU36598.1 hypothetical protein MIMGU_mgv1a019273mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32060_c0_g1_i1 11.31737927 1.722273319 20.91248523 12.1423731 3.601978504 0.003667926 0.01624214 Up 0 0 0.7821758 2.586652 4.178491 1.047679 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32062_c0_g1_i1 10.2040411 4.086889466 16.32119272 3.993548849 1.997671361 0.024910299 0.080953122 Up 0 1.059035 1.248311 3.258248 2.245911 2.209127 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32063_c0_g1_i1 5.448064855 10.89612971 0 0 #NAME? 0.000607655 0.003354406 Down 2.417798 2.341804 1.089892 0 0 0 CAN61630.1 hypothetical protein VITISV_003191 [Vitis vinifera] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN32065_c0_g1_i1 5.41560009 10.83120018 0 0 #NAME? 0.000527508 0.00296022 Down 0.7282002 1.410529 1.333101 0 0 0 ALV87650.1 coTCRcys [synthetic construct] -- -- -- -- -- -- -- -- -- -- -- -- -- U ENOG410Y0GD T cell receptor alpha constant -- PF09291.9 Domain of unknown function (DUF1968) TRINITY_DN32066_c0_g1_i1 18.17361209 32.00040135 4.346822826 0.13583651 -2.880056801 3.07E-05 0.000226973 Down 3.69514 5.21889 4.101339 0 1.415455 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32068_c0_g1_i1 7.875070885 15.75014177 0 0 #NAME? 0.000640162 0.003513807 Down 3.39506 5.418296 0.8937296 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32070_c0_g1_i1 8.055619851 16.1112397 0 0 #NAME? 1.26E-05 0.000100442 Down 1.347261 3.520594 1.899715 0 0.03289855 2.89E-79 XP_012435595.1 PREDICTED: uncharacterized protein LOC105762260 [Gossypium raimondii] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32071_c0_g1_i1 41.75212615 83.5042523 0 0 #NAME? 7.95E-22 2.91E-20 Down 11.03611 8.209343 6.503885 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32076_c0_g1_i1 7.147734549 14.2954691 0 0 #NAME? 3.91E-05 0.000283292 Down 1.9169 1.857033 3.241005 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32081_c0_g1_i1 4.83796794 9.67593588 0 0 #NAME? 0.001222529 0.006240917 Down 1.558303 1.530314 2.168947 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32084_c0_g1_i1 9.770384508 17.3673576 2.173411413 0.125143471 -2.99834507 0.002298346 0.010843865 Down 3.87133 4.669403 2.277028 0 1.025234 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32086_c0_g1_i1 4.021165383 7.270754072 0.771576693 0.106120587 -3.236223528 0.042404476 0.124345374 Down 1.112432 1.089816 2.097909 0 2.36E-71 0.4280705 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32091_c0_g1_i1 8.585163406 17.17032681 0 0 #NAME? 5.23E-06 4.45E-05 Down 1.73631 3.097224 2.916234 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32092_c0_g1_i1 13.99725921 27.27004795 0.724470471 0.026566527 -5.234246539 1.92E-07 2.04E-06 Down 4.190943 3.221645 2.574649 0 0.2609151 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32093_c0_g1_i1 40.08418541 16.34219806 63.82617276 3.905605142 1.9655461 8.93E-06 7.29E-05 Up 0.4907463 4.101081 1.695355 6.570767 5.078705 8.043587 XP_011077109.1 putative late blight resistance protein homolog R1B-14 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32098_c0_g1_i1 32.78216379 61.80065657 3.763671022 0.060900179 -4.037409731 5.57E-08 6.37E-07 Down 5.242756 11.73662 9.087351 0 0.4925947 0.7819544 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3209_c0_g1_i1 8.139559417 3.380457692 12.89866114 3.81565525 1.931930828 0.037623162 0.112942303 Up 0.1379281 0.7869585 0.1053171 1.306919 1.181733 0.5733105 PIM98048.1 hypothetical protein CDL12_29471 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN320_c0_g1_i1 26.08985923 52.17971846 0 0 #NAME? 7.66E-14 1.62E-12 Down 10.96299 5.687885 7.473941 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32101_c0_g1_i1 8.848262239 17.69652448 0 0 #NAME? 0.027669123 0.088323324 Down 7.574289 0.7924923 1.3337 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32103_c0_g1_i1 10.50355809 16.980337 4.026779181 0.237143655 -2.076166826 0.028044319 0.089280496 Down 2.499741 3.904693 1.185888 1.066632 0.3558623 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32104_c0_g1_i1 6.749530264 13.49906053 0 0 #NAME? 0.000363714 0.002126764 Down 4.126803 0.7995134 3.200853 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32109_c0_g1_i1 5.325605882 10.65121176 0 0 #NAME? 0.000620312 0.00341514 Down 1.15654 2.227496 1.768106 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32111_c0_g1_i1 5.795519434 0 11.59103887 Inf Inf 0.000140566 0.000904038 Up 0 0 0 1.925928 0.5421175 1.696568 OWM68977.1 hypothetical protein CDL15_Pgr025164 [Punica granatum] Q2PCF1|PDR2_NICPL Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia OX=4092 GN=PDR2 PE=2 SV=1 -- -- -- -- -- -- KOG0065 "Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG0842 (ABC) transporter Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887); -- -- TRINITY_DN32112_c0_g1_i1 3.69332677 7.386653541 0 0 #NAME? 0.007723575 0.030700198 Down 1.372689 2.785141 0.5416059 0 0 0 XP_021667704.1 uncharacterized protein LOC110655621 [Hevea brasiliensis] Q39580|DYL1_CHLRE "Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii OX=3055 PE=1 SV=1" -- -- -- -- -- -- KOG3430 Dynein light chain type 1 [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton S ENOG4111NK2 "dynein, light chain" Molecular Function: motor activity (GO:0003774);|Cellular Component: microtubule (GO:0005874);|Cellular Component: axoneme (GO:0005930);|Biological Process: microtubule-based process (GO:0007017);|Cellular Component: dynein complex (GO:0030286);|Cellular Component: motile cilium (GO:0031514);|Biological Process: motile cilium assembly (GO:0044458);|Cellular Component: ciliary plasm (GO:0097014); PF01221.17 Dynein light chain type 1 TRINITY_DN32115_c0_g1_i1 8.771791916 0 17.54358383 Inf Inf 1.20E-06 1.14E-05 Up 0 0 0 1.171278 2.348173 2.833055 OVA01752.1 Ribosomal protein L10/L12 [Macleaya cordata] P52855|RLA1_MAIZE 60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1 pop:POPTR_0014s10120g K02942 "RP-LP1, RPLP1" large subunit ribosomal protein LP1 ko03010 Ribosome KOG1762 60s acidic ribosomal protein P1 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2058 Ribosomal protein Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translational elongation (GO:0006414);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Molecular Function: protein kinase activator activity (GO:0030295);|Molecular Function: ribonucleoprotein complex binding (GO:0043021);|Molecular Function: protein-containing complex binding (GO:0044877); PF00428.18 60s Acidic ribosomal protein TRINITY_DN32116_c0_g1_i1 2.246707721 0 4.493415442 Inf Inf 0.040820008 0.120555799 Up 0 0 0 0.1926254 0.7919575 1.119148 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32117_c0_g1_i1 6.51023475 13.0204695 0 0 #NAME? 0.002213494 0.010492599 Down 0.8837579 3.848968 1.333824 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32124_c0_g1_i1 7.041118258 14.08223652 0 0 #NAME? 4.31E-05 0.000308629 Down 1.066067 2.563502 3.692544 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32125_c0_g1_i1 6.417262885 0 12.83452577 Inf Inf 0.000715622 0.003879176 Up 0 0 0 1.607466 0.8200406 3.887396 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32126_c0_g1_i1 3.149280486 6.298560972 0 0 #NAME? 0.014625942 0.052309755 Down 0.4503935 2.156252 1.388958 0 0 0 ABA97652.1 "retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]" Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN32135_c0_g1_i1 8.640597154 0 17.28119431 Inf Inf 3.89E-05 0.000281587 Up 0 0 0 3.073437 0.8884424 3.889104 ACL88129.1 "Vha16-PA, partial [synthetic construct]" Q00607|VATL_CANTR V-type proton ATPase 16 kDa proteolipid subunit OS=Candida tropicalis OX=5482 GN=VMA3 PE=3 SV=1 shs:STEHIDRAFT_80385 K02155 "ATPeV0C, ATP6L" V-type H+-transporting ATPase 16kDa proteolipid subunit ko04145|ko00190 Phagosome|Oxidative phosphorylation KOG0232 "Vacuolar H+-ATPase V0 sector, subunits c/c'" [C] METABOLISM Energy production and conversion C COG0636 "F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity)" "Cellular Component: vacuolar membrane (GO:0005774);|Molecular Function: proton transmembrane transporter activity (GO:0015078);|Biological Process: ATP hydrolysis coupled proton transport (GO:0015991);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: proton-transporting V-type ATPase, V0 domain (GO:0033179);" PF00137.20 ATP synthase subunit C TRINITY_DN32136_c0_g1_i1 8.257838688 2.444188664 14.07148871 5.757120519 2.525347414 0.009135323 0.035343024 Up 0.1477058 0.7193196 0.1091968 1.049298 1.974288 1.323879 ACL86730.1 "RpL24-PA, partial [synthetic construct]" Q92354|RL24A_SCHPO 60S ribosomal protein L24-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl2401 PE=3 SV=1 tms:TREMEDRAFT_73338 K02896 "RP-L24e, RPL24" large subunit ribosomal protein L24e ko03010 Ribosome KOG1722 60s ribosomal protein L24 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2075 Ribosomal protein Biological Process: ribosomal large subunit assembly (GO:0000027);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Biological Process: assembly of large subunit precursor of preribosome (GO:1902626); PF01246.19 Ribosomal protein L24e TRINITY_DN32138_c0_g1_i1 15.20966746 25.52185196 4.897482951 0.191893714 -2.381620645 0.000970179 0.005081266 Down 2.908323 3.390615 2.561713 0 0.463041 0.8992515 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3213_c0_g1_i1 8.685018754 17.37003751 0 0 #NAME? 4.79E-06 4.10E-05 Down 2.055445 2.273808 2.277075 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32148_c0_g1_i1 6.450633757 11.42877346 1.472494053 0.128840952 -2.956336869 0.01639236 0.057441592 Down 1.778089 1.152219 0.7931583 0 0.2873242 0.1517567 XP_012847333.1 PREDICTED: uncharacterized protein LOC105967276 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32150_c0_g1_i1 97.42436643 194.8487329 0 0 #NAME? 1.56E-60 2.23E-58 Down 9.47976 10.33722 9.622984 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32153_c0_g1_i1 16.29716468 31.86985889 0.724470471 0.022732152 -5.459121933 7.57E-09 9.68E-08 Down 3.8811 3.721156 3.850985 0 0.2352031 0 AIC55057.1 "RPL18A, partial [synthetic construct]" Q8L7K0|R18A1_ARATH 60S ribosomal protein L18a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18AA PE=2 SV=1 smp:SMAC_04642 K02882 "RP-L18Ae, RPL18A" large subunit ribosomal protein L18Ae ko03010 Ribosome KOG0829 60S ribosomal protein L18A [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2157 ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF01775.16 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A TRINITY_DN32154_c0_g1_i1 10.94881956 1.628057814 20.26958131 12.45016063 3.638092451 0.001195963 0.006114932 Up 0.4495428 0 0 2.652433 1.502108 0.7265904 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32156_c0_g1_i1 29.85200682 58.93243695 0.771576693 0.013092564 -6.25510855 7.92E-17 2.10E-15 Down 2.526564 3.204672 2.72859 0 0 0.07149508 XP_011091918.1 vinorine synthase-like [Sesamum indicum] Q94FT4|SALAT_PAPSO Salutaridinol 7-O-acetyltransferase OS=Papaver somniferum OX=3469 GN=SALAT PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41104B0 Transferase family Biological Process: alkaloid metabolic process (GO:0009820);|Molecular Function: salutaridinol 7-O-acetyltransferase activity (GO:0047180); -- -- TRINITY_DN32161_c0_g1_i1 7.882790375 0.492078091 15.27350266 31.03877805 4.955999857 0.000136405 0.000879521 Up 0 0 0.1259777 1.243769 1.247085 1.556581 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y2BM NA -- -- -- TRINITY_DN32163_c0_g1_i1 19.57443549 28.02237037 11.12650061 0.397057796 -1.332579074 0.022897825 0.075620297 Down 2.910137 5.672135 5.95668 1.402088 1.876598 1.441645 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32164_c0_g1_i1 114.5533543 7.323282815 221.7834258 30.28470037 4.920517233 3.96E-53 4.72E-51 Up 0.3384861 0.5743706 0.7065316 13.78943 13.2853 11.73556 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32165_c0_g1_i1 12.82598984 0 25.65197968 Inf Inf 1.78E-09 2.47E-08 Up 0 0 0 2.988217 3.21013 3.288618 RHZ75952.1 hypothetical protein Glove_208g78 [Diversispora versiformis] Q9C0Z7|RS6B_SCHPO 40S ribosomal protein S6-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rps602 PE=1 SV=1 spo:SPAPB1E7.12 K02991 "RP-S6e, RPS6" small subunit ribosomal protein S6e ko03010 Ribosome KOG1646 40S ribosomal protein S6 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2125 40s ribosomal protein s6 Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Biological Process: ribosome biogenesis (GO:0042254); PF01092.18 Ribosomal protein S6e TRINITY_DN32167_c0_g1_i1 4.182533009 0.624179352 7.740886665 12.40170256 3.632466288 0.020394993 0.068850061 Up 0 0.4449658 0 2.136536 1.093513 0.5349225 XP_012849149.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g15130 [Erythranthe guttata] Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E46 PE=3 SV=2 -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- "PF01535.19,PF13041.5,PF12854.6" PPR repeat|PPR repeat family|PPR repeat TRINITY_DN32170_c0_g1_i1 22.11273872 42.7659886 1.45948884 0.034127326 -4.872928806 1.12E-10 1.78E-09 Down 5.652935 5.436566 4.676056 0.2020122 0.1973796 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32173_c0_g1_i1 10.83432026 17.51918114 4.149459369 0.236852358 -2.077940058 0.024069732 0.078745754 Down 3.472717 3.354658 0.9943887 0 0.4615702 0.9366267 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32174_c0_g1_i1 8.538473786 0 17.07694757 Inf Inf 1.67E-06 1.55E-05 Up 0 0 0 1.829646 1.813431 1.74388 AOQ13439.1 RpL26-PA [synthetic construct] P51414|RL261_ARATH 60S ribosomal protein L26-1 OS=Arabidopsis thaliana OX=3702 GN=RPL26A PE=2 SV=2 thj:104807631 K02898 "RP-L26e, RPL26" large subunit ribosomal protein L26e ko03010 Ribosome KOG3401 60S ribosomal protein L26 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0198 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (By similarity) Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to cold (GO:0009409);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Biological Process: ribosomal large subunit biogenesis (GO:0042273);|Cellular Component: polysomal ribosome (GO:0042788); "PF16906.4,PF00467.28" "Ribosomal proteins L26 eukaryotic, L24P archaeal|KOW motif" TRINITY_DN32181_c0_g1_i1 60.95769076 120.4611666 1.454214891 0.012072064 -6.372183852 2.54E-33 1.60E-31 Down 3.875501 5.263477 5.303324 0.04033467 0.1173637 0 AEK66123.1 NADH dehydrogenase subunit 4 (mitochondrion) [Cloning vector pRS316-1B9] P26848|NU4M_MARPO NADH-ubiquinone oxidoreductase chain 4 OS=Marchantia polymorpha OX=3197 GN=ND4 PE=3 SV=2 ccp:ChcroMp17 K03881 ND4 NADH-ubiquinone oxidoreductase chain 4 ko00190 Oxidative phosphorylation KOG4845 "NADH dehydrogenase, subunit 4" [C] METABOLISM Energy production and conversion C COG1008 subunit m Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: mitochondrial membrane (GO:0031966);|Biological Process: ATP synthesis coupled electron transport (GO:0042773);|Cellular Component: respiratory chain (GO:0070469); -- -- TRINITY_DN32182_c0_g1_i1 7.212523206 12.60332234 1.821724075 0.144543163 -2.790427725 0.013722428 0.04963364 Down 0.5721601 1.384735 0.7085799 0.100001 0.1975654 0 XP_023908235.1 uncharacterized protein LOC112019924 [Quercus suber] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN32183_c0_g1_i1 5.90474906 0 11.80949812 Inf Inf 0.000451447 0.002578328 Up 0 0 0 1.718606 0.7631204 0.4981947 AOQ08545.1 "alphaTub84B-RA, partial [synthetic construct]" P11481|TBA1_VOLCA Tubulin alpha-1/alpha-2 chain OS=Volvox carteri OX=3067 GN=TUBA1 PE=3 SV=1 mpp:MICPUCDRAFT_27021 K07374 TUBA tubulin alpha ko04145 Phagosome KOG1376 Alpha tubulin [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5023 protein polymerization Molecular Function: GTPase activity (GO:0003924);|Molecular Function: structural constituent of cytoskeleton (GO:0005200);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based process (GO:0007017); PF03953.16 Tubulin C-terminal domain TRINITY_DN32188_c0_g1_i1 17.89916087 30.4886807 5.309641042 0.174151223 -2.521587488 0.000319893 0.001896916 Down 6.931388 7.709513 3.387805 0.902657 0 1.738504 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32190_c0_g1_i1 178.6939778 351.4821574 5.905798059 0.016802554 -5.895175618 9.22E-88 2.04E-85 Down 12.32238 13.29132 14.35956 0.09667404 0.2880944 0.1420436 AAX42329.1 eukaryotic translation elongation factor 1 alpha 1 [synthetic construct] Q01372|EF1A_NEUCR Elongation factor 1-alpha OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=tef-1 PE=3 SV=2 ncr:NCU02003 K03231 EEF1A elongation factor 1-alpha ko03013 RNA transport KOG0052 Translation elongation factor EF-1 alpha/Tu [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG5256 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity) Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: translation (GO:0006412);|Biological Process: translational elongation (GO:0006414); "PF00009.26,PF03143.16,PF03144.24" Elongation factor Tu GTP binding domain|Elongation factor Tu C-terminal domain|Elongation factor Tu domain 2 TRINITY_DN32191_c0_g1_i1 33.52676487 3.024719571 64.02881016 21.16851122 4.403847903 5.73E-15 1.32E-13 Up 0.1030144 0 0.1345822 1.371681 1.224616 1.497468 ACL86764.1 "Ef2b-PA, partial [synthetic construct]" Q875S0|EF2_LACK1 Elongation factor 2 OS=Lachancea kluyveri (strain ATCC 58438 / CBS 3082 / CCRC 21498 / NBRC 1685 / JCM 7257 / NCYC 543 / NRRL Y-12651) OX=226302 GN=EFT2 PE=3 SV=1 -- -- -- -- -- -- KOG0469 Elongation factor 2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0480 "Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)" Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737); "PF00009.26,PF03764.17,PF00679.23,PF14492.5,PF03144.24,PF01926.22" "Elongation factor Tu GTP binding domain|Elongation factor G, domain IV|Elongation factor G C-terminus|Elongation Factor G, domain II|Elongation factor Tu domain 2|50S ribosome-binding GTPase" TRINITY_DN32196_c0_g1_i1 8.470463631 16.94092726 0 0 #NAME? 6.28E-06 5.27E-05 Down 3.2748 1.2052 2.888267 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32198_c0_g1_i1 19.9195898 38.37969076 1.45948884 0.038027634 -4.716808003 1.33E-09 1.86E-08 Down 1.932154 1.388537 2.344912 0.08312585 0.08253085 0 AIC49608.1 "RPL4, partial [synthetic construct]" P35679|RL4A_SCHPO 60S ribosomal protein L4-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl402 PE=1 SV=2 ppp:PHYPADRAFT_160075 K02930 "RP-L4e, RPL4" large subunit ribosomal protein L4e ko03010 Ribosome KOG1475 Ribosomal protein RPL1/RPL2/RL4L4 [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification J COG0088 "One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity)" Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); "PF00573.21,PF14374.5" Ribosomal protein L4/L1 family|60S ribosomal protein L4 C-terminal domain TRINITY_DN32203_c0_g1_i1 2.998776594 0 5.997553188 Inf Inf 0.012343032 0.04536739 Up 0 0 0 1.085515 0.3728496 1.184565 ACL83925.1 "Pdsw-PA, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG4009 "NADH-ubiquinone oxidoreductase, subunit NDUFB10/PDSW" [C] METABOLISM Energy production and conversion I ENOG4111MMM NADH dehydrogenase (ubiquinone) 1 beta subcomplex -- -- -- TRINITY_DN32205_c0_g1_i1 27.27601208 54.55202416 0 0 #NAME? 3.19E-11 5.37E-10 Down 7.450006 12.03829 5.476309 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32209_c0_g1_i1 14.50580292 29.01160585 0 0 #NAME? 1.05E-09 1.49E-08 Down 3.705447 4.176285 3.887287 0 1.29E-98 0 PIN02507.1 hypothetical protein CDL12_24973 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YNU9 Cotton fibre expressed protein -- -- -- TRINITY_DN32216_c0_g1_i1 26.81541901 3.93662473 49.69421329 12.62355868 3.65804677 2.06E-09 2.83E-08 Up 0 0 1.822375 5.776966 4.879281 8.161138 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32218_c0_g1_i1 5.873398884 10.66009206 1.086705707 0.101941494 -3.294186699 0.011587791 0.043051613 Down 1.183856 1.144376 1.965363 0 0.4086479 0 SJX40530.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" O74884|RL24B_SCHPO 60S ribosomal protein L24-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl2402 PE=1 SV=1 spo:SPCC330.14c K02896 "RP-L24e, RPL24" large subunit ribosomal protein L24e ko03010 Ribosome KOG1722 60s ribosomal protein L24 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2075 Ribosomal protein Biological Process: ribosomal large subunit assembly (GO:0000027);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Biological Process: assembly of large subunit precursor of preribosome (GO:1902626); PF01246.19 Ribosomal protein L24e TRINITY_DN32225_c0_g1_i1 9.910011843 19.82002369 0 0 #NAME? 8.69E-06 7.10E-05 Down 4.40495 1.402516 4.655653 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32226_c0_g1_i1 14.61591885 2.052526471 27.17931122 13.24188097 3.727036162 3.37E-06 2.96E-05 Up 0 0.4198312 0.1108706 1.392635 1.970328 2.15363 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32227_c0_g1_i1 12.81635348 25.63270696 0 0 #NAME? 1.15E-08 1.44E-07 Down 4.845584 2.590368 4.395589 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3222_c0_g1_i1 7.320610049 12.75938459 1.881835511 0.147486385 -2.761346312 0.012084181 0.0445784 Down 1.468004 0.9047522 1.213294 0 0.136405 0.2770455 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32231_c0_g1_i1 9.599886237 2.865574536 16.33419794 5.700147643 2.510999288 0.008841882 0.034386057 Up 0.1902042 0 0.7297344 1.713321 1.381971 1.40543 XP_011085266.1 LRR receptor-like serine/threonine-protein kinase FLS2 [Sesamum indicum] Q9FL28|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana OX=3702 GN=FLS2 PE=1 SV=1 sind:105167308 K13420 FLS2 LRR receptor-like serine/threonine-protein kinase FLS2 ko04626 Plant-pathogen interaction -- -- -- -- -- S COG4886 leucine Rich Repeat -- PF08263.11 Leucine rich repeat N-terminal domain TRINITY_DN32234_c0_g1_i1 11.6832632 23.00429117 0.362235236 0.01574642 -5.988832306 6.98E-07 6.86E-06 Down 4.428004 3.711572 3.076595 0 0.2057312 0 SJX31850.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" Q9C912|R35A3_ARATH 60S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=1 cvr:CHLNCDRAFT_30584 K02917 "RP-L35Ae, RPL35A" large subunit ribosomal protein L35Ae ko03010 Ribosome KOG0887 60S ribosomal protein L35A/L37 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2451 Ribosomal protein Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Biological Process: ribosomal large subunit biogenesis (GO:0042273); PF01247.17 Ribosomal protein L35Ae TRINITY_DN32236_c0_g1_i1 17.25651529 28.63078564 5.882244948 0.205451748 -2.283128492 0.00081524 0.004358285 Down 4.287027 4.948528 3.32605 0.4170984 1.281989 0.4161604 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32237_c0_g1_i1 4.101124489 0 8.202248977 Inf Inf 0.002085084 0.009983966 Up 0 0 0 0.4701214 1.113123 1.294341 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3223_c0_g1_i1 2.611579931 0 5.223159862 Inf Inf 0.022627983 0.074908987 Up 6.43E-06 3.69E-81 0 0.318156 0.9509756 1.027228 PNY03339.1 "retrotransposon-related protein, partial [Trifolium pratense]" P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN32240_c0_g1_i1 14.60615051 2.835850858 26.37645015 9.301070993 3.217396848 1.79E-05 0.000138766 Up 0.1716074 0.6697635 0 1.83957 2.145272 2.062322 ACL91640.1 CG5010-PA [synthetic construct] -- -- -- -- -- -- -- -- KOG4090 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG41126E7 coiled-coil-helix-coiled-coil-helix domain containing -- -- -- TRINITY_DN3224_c0_g1_i1 21.75606127 4.366172679 39.14594986 8.965735608 3.164421956 3.74E-07 3.82E-06 Up 0.1950272 0.1066471 0.147108 1.198726 0.7332868 1.195478 XP_011090716.1 primary amine oxidase [Sesamum indicum] Q43077|AMO_PEA Primary amine oxidase OS=Pisum sativum OX=3888 PE=1 SV=1 sind:105171340 K00276 "AOC3, AOC2, tynA" primary-amine oxidase ko00260|ko00950|ko00350|ko00410|ko00960|ko00360 "Glycine, serine and threonine metabolism|Isoquinoline alkaloid biosynthesis|Tyrosine metabolism|beta-Alanine metabolism|Tropane, piperidine and pyridine alkaloid biosynthesis|Phenylalanine metabolism" KOG1186 Copper amine oxidase [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG3733 amine oxidase Molecular Function: copper ion binding (GO:0005507);|Molecular Function: primary amine oxidase activity (GO:0008131);|Biological Process: amine metabolic process (GO:0009308);|Molecular Function: quinone binding (GO:0048038);|Molecular Function: tryptamine:oxygen oxidoreductase (deaminating) activity (GO:0052593);|Molecular Function: aminoacetone:oxygen oxidoreductase(deaminating) activity (GO:0052594);|Molecular Function: aliphatic-amine oxidase activity (GO:0052595);|Molecular Function: phenethylamine:oxygen oxidoreductase (deaminating) activity (GO:0052596);|Molecular Function: diamine oxidase activity (GO:0052597);|Biological Process: oxidation-reduction process (GO:0055114);|Biological Process: cellular response to azide (GO:0097185); "PF01179.19,PF02728.15,PF02727.15" "Copper amine oxidase, enzyme domain|Copper amine oxidase, N3 domain|Copper amine oxidase, N2 domain" TRINITY_DN32251_c0_g1_i1 9.91443458 19.82886916 0 0 #NAME? 7.11E-07 6.97E-06 Down 2.473525 4.817663 4.964811 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32258_c0_g1_i1 2.398420864 4.796841729 0 0 #NAME? 0.046627907 0.134002982 Down 0.8824612 1.084877 0.5286641 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32265_c0_g1_i1 13.55046031 0 27.10092062 Inf Inf 5.50E-10 8.06E-09 Up 0 0 0 1.293981 1.597879 1.451674 ACL86741.1 "RpL5-PA, partial [synthetic construct]" O65353|RL5_HELAN 60S ribosomal protein L5 OS=Helianthus annuus OX=4232 GN=RPL5A PE=2 SV=1 cvr:CHLNCDRAFT_37575 K02932 "RP-L5e, RPL5" large subunit ribosomal protein L5e ko03010 Ribosome KOG0875 60S ribosomal protein L5 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0256 "This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Molecular Function: 5S rRNA binding (GO:0008097); "PF17144.3,PF14204.5" "Ribosomal large subunit proteins 60S L5, and 50S L18|Ribosomal L18 C-terminal region" TRINITY_DN32268_c0_g1_i1 6.967746134 13.93549227 0 0 #NAME? 5.40E-05 0.000380147 Down 0.8872244 1.010464 1.271667 0 0 0 XP_011098379.1 uncharacterized protein LOC105177054 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32269_c0_g1_i1 10.76747034 21.53494069 0 0 #NAME? 2.22E-07 2.34E-06 Down 0.9599257 2.287544 1.791464 0 0 0 KNA23339.1 hypothetical protein SOVF_025630 isoform B [Spinacia oleracea] Q10Q08|RFA1B_ORYSJ Replication protein A 70 kDa DNA-binding subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1B PE=1 SV=1 dosa:Os03t0214100-01 K07466 "RFA1, RPA1, rpa" replication factor A1 ko03430|ko03030|ko03440|ko03420 Mismatch repair|DNA replication|Homologous recombination|Nucleotide excision repair KOG0851 "Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " -- -- -- "Biological Process: telomere maintenance (GO:0000723);|Biological Process: double-strand break repair via homologous recombination (GO:0000724);|Cellular Component: nuclear chromosome, telomeric region (GO:0000784);|Molecular Function: damaged DNA binding (GO:0003684);|Molecular Function: single-stranded DNA binding (GO:0003697);|Cellular Component: DNA replication factor A complex (GO:0005662);|Biological Process: DNA-dependent DNA replication (GO:0006261);|Biological Process: DNA unwinding involved in DNA replication (GO:0006268);|Biological Process: DNA repair (GO:0006281);|Biological Process: nucleotide-excision repair (GO:0006289);|Biological Process: telomere maintenance via telomerase (GO:0007004);|Molecular Function: single-stranded telomeric DNA binding (GO:0043047);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: meiotic cell cycle (GO:0051321);" -- -- TRINITY_DN32277_c0_g1_i1 25.21344044 50.42688088 0 0 #NAME? 2.05E-16 5.26E-15 Down 6.942453 3.796368 5.72744 8.49E-70 9.00E-84 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32278_c0_g1_i1 10.65199117 21.30398233 0 0 #NAME? 2.67E-07 2.78E-06 Down 2.635233 3.153924 3.200669 0 0 0 AIC49620.1 "RPL26, partial [synthetic construct]" P51414|RL261_ARATH 60S ribosomal protein L26-1 OS=Arabidopsis thaliana OX=3702 GN=RPL26A PE=2 SV=2 eus:EUTSA_v10010974mg K02898 "RP-L26e, RPL26" large subunit ribosomal protein L26e ko03010 Ribosome KOG3401 60S ribosomal protein L26 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0198 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (By similarity) Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to cold (GO:0009409);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Biological Process: ribosomal large subunit biogenesis (GO:0042273);|Cellular Component: polysomal ribosome (GO:0042788); "PF16906.4,PF00467.28" "Ribosomal proteins L26 eukaryotic, L24P archaeal|KOW motif" TRINITY_DN3227_c0_g1_i1 15.06781124 30.13562249 0 0 #NAME? 5.03E-10 7.42E-09 Down 5.591115 4.066069 4.304645 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32284_c0_g1_i1 6.123231558 12.24646312 0 0 #NAME? 0.000221074 0.001359805 Down 2.696729 1.553295 1.358586 0 0 0 ANG08540.1 pyruvate decarboxylase 2 [Diospyros kaki] A2XFI3|PDC2_ORYSI Pyruvate decarboxylase 2 OS=Oryza sativa subsp. indica OX=39946 GN=PDC2 PE=2 SV=2 gra:105799965 K01568 "E4.1.1.1, pdc" pyruvate decarboxylase ko00010 Glycolysis / Gluconeogenesis KOG1184 Thiamine pyrophosphate-requiring enzyme [EH] METABOLISM|METABOLISM Amino acid transport and metabolism |Coenzyme transport and metabolism GH COG3961 Pyruvate decarboxylase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: pyruvate decarboxylase activity (GO:0004737);|Molecular Function: thiamine pyrophosphate binding (GO:0030976); -- -- TRINITY_DN32285_c0_g1_i1 9.850766358 0 19.70153272 Inf Inf 2.06E-07 2.18E-06 Up 0 0 0 2.269751 3.066153 3.004112 ACL86381.1 "RpS26-PA, partial [synthetic construct]" P49206|RS261_ARATH 40S ribosomal protein S26-1 OS=Arabidopsis thaliana OX=3702 GN=RPS26A PE=2 SV=2 smo:SELMODRAFT_83484 K02976 "RP-S26e, RPS26" small subunit ribosomal protein S26e ko03010 Ribosome KOG1768 40s ribosomal protein S26 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG4830 Ribosomal protein Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF01283.18 Ribosomal protein S26e TRINITY_DN32286_c0_g1_i1 19.44384506 38.88769013 0 0 #NAME? 9.99E-13 1.93E-11 Down 4.553577 2.578609 2.941814 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32290_c0_g1_i1 5.312083995 10.62416799 0 0 #NAME? 0.000627746 0.003453552 Down 0.3780942 1.215587 0.854015 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32295_c0_g1_i1 10.93390342 1.767480569 20.10032628 11.37230396 3.50745266 0.000129235 0.000837575 Up 0.3007663 0.2894266 0.228801 1.557494 2.512072 2.579349 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32303_c0_g1_i1 292.3423897 573.9648036 10.71997578 0.018677061 -5.74258872 6.33E-135 2.39E-132 Down 16.70363 19.40887 17.73942 0.3997584 0.237154 0.1666354 XP_012833929.1 PREDICTED: protein ECERIFERUM 1-like [Erythranthe guttata] F4HVY0|CER1_ARATH Protein ECERIFERUM 1 OS=Arabidopsis thaliana OX=3702 GN=CER1 PE=1 SV=1 vvi:100854413 K15404 "K15404, CER1" aldehyde decarbonylase ko00073 "Cutin, suberine and wax biosynthesis" -- -- -- -- -- -- -- -- Molecular Function: sphingosine hydroxylase activity (GO:0000170);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: wax biosynthetic process (GO:0010025);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: sphingolipid biosynthetic process (GO:0030148);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: alkane biosynthetic process (GO:0043447);|Biological Process: defense response to fungus (GO:0050832); "PF12076.7,PF04116.12" WAX2 C-terminal domain|Fatty acid hydroxylase superfamily TRINITY_DN32307_c0_g1_i1 4.814110334 8.541514961 1.086705707 0.127226342 -2.974530682 0.035391843 0.107756517 Down 1.820822 0.6024562 2.858595 0 0.5476013 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32308_c0_g1_i1 14.89421692 0 29.78843384 Inf Inf 6.69E-11 1.09E-09 Up 0 0 0 1.920251 2.121542 2.499146 ACL91955.1 Cpr47Ea-PA [synthetic construct] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00379.22 Insect cuticle protein TRINITY_DN32309_c0_g1_i1 14.81937291 24.32910478 5.309641042 0.218242352 -2.195997 0.005747103 0.023870274 Down 3.673858 7.702576 3.359963 0.8996534 0 1.689151 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32312_c0_g1_i1 11.01650018 17.5708693 4.462131066 0.253950501 -1.977380774 0.016418712 0.057520616 Down 2.154873 2.306082 3.190294 0.4600658 0.4762671 0.5387698 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32313_c0_g1_i1 13.17741801 24.5172901 1.837545922 0.074948981 -3.737947317 0.001387097 0.006976307 Down 6.548275 4.024146 1.84727 0.6866081 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32316_c0_g1_i1 85.25724755 170.5144951 0 0 #NAME? 9.81E-22 3.58E-20 Down 22.2702 12.97728 14.02193 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32318_c0_g1_i1 10.79485939 0.651223126 20.93849566 32.15256773 5.006862052 0.000356459 0.002089454 Up 0.2524815 0 0 1.879729 4.016994 1.249514 SJX26292.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" P57728|RL28B_SCHPO 60S ribosomal protein L28-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl2801 PE=1 SV=1 cre:CHLREDRAFT_155455 K02900 "RP-L27Ae, RPL27A" large subunit ribosomal protein L27Ae ko03010 Ribosome KOG1742 60s ribosomal protein L15/L27 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0200 Binds to the 23S rRNA (By similarity) Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF00828.18 "Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A" TRINITY_DN32321_c0_g1_i1 6.479328789 12.95865758 0 0 #NAME? 0.000106582 0.000702288 Down 1.299657 1.937869 2.499663 9.42E-86 1.89E-56 0 XP_012856660.1 PREDICTED: auxin-responsive protein IAA26-like [Erythranthe guttata] O24408|IAA18_ARATH Auxin-responsive protein IAA18 OS=Arabidopsis thaliana OX=3702 GN=IAA18 PE=1 SV=2 sind:105157692 K14484 IAA auxin-responsive protein IAA ko04075 Plant hormone signal transduction -- -- -- -- -- K ENOG410YI31 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to auxin (GO:0009733);|Biological Process: auxin-activated signaling pathway (GO:0009734); -- -- TRINITY_DN32323_c0_g1_i1 7.707948967 0.651223126 14.76467481 22.67222127 4.502853839 0.000175809 0.00110625 Up 0.4432621 0 0 2.003272 3.321053 1.696657 ACL92314.1 ATPsyn-b-PA [synthetic construct] -- -- -- -- -- -- -- -- KOG3976 "Mitochondrial F1F0-ATP synthase, subunit b/ATP4" [C] METABOLISM Energy production and conversion I ENOG410ZUQH atp synthase -- PF05405.13 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) TRINITY_DN32326_c0_g1_i1 6.088110469 10.36504476 1.811176178 0.174738867 -2.516727554 0.04485116 0.129908673 Down 2.405728 1.66315 0.8100031 0 0.656697 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32329_c0_g1_i1 8.03448628 2.286602434 13.78237013 6.027444877 2.591546552 0.011100243 0.041491545 Up 0.8155304 0 0.640598 0.9973399 3.025001 3.022972 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32332_c0_g1_i1 7.396131354 12.86332097 1.928941734 0.149956744 -2.737381686 0.01400236 0.050460717 Down 3.062544 1.851461 0.8813247 0 0 0.7030096 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32335_c0_g1_i1 14.74832958 29.13442393 0.362235236 0.012433238 -6.329654087 8.05E-09 1.03E-07 Down 2.486937 2.012841 2.956845 0 0.07502024 0 SJX45404.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" Q9LHP1|RL74_ARATH 60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1 smo:SELMODRAFT_103994 K02937 "RP-L7e, RPL7" large subunit ribosomal protein L7e ko03010 Ribosome KOG3184 60S ribosomal protein L7 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1841 ribosomal large subunit biogenesis "Biological Process: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000463);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: polysomal ribosome (GO:0042788);" "PF08079.11,PF00327.19" Ribosomal L30 N-terminal domain|Ribosomal protein L30p/L7e TRINITY_DN32336_c0_g1_i1 33.20551181 0 66.41102363 Inf Inf 1.77E-23 7.12E-22 Up 4.66E-51 0 1.87E-74 6.19532 8.226137 10.55267 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32337_c0_g1_i1 12.32916125 1.714951826 22.94337067 13.3784345 3.741837402 2.19E-05 0.000166438 Up 0.4310556 0 0.330993 2.086287 3.633772 2.283121 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32339_c0_g1_i1 3.735023621 0 7.470047242 Inf Inf 0.003768676 0.016628259 Up 0 0 0 0.8561743 0.6445021 1.105861 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3233_c0_g1_i1 75.0089085 150.017817 0 0 #NAME? 3.80E-47 3.79E-45 Down 3.359025 3.940251 3.909791 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32341_c0_g1_i1 4.033169131 7.704103026 0.362235236 0.047018483 -4.410628204 0.033186174 0.102338314 Down 0.4877659 0.7127972 2.405893 0 0.198652 0 PIN20453.1 hypothetical protein CDL12_06861 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32346_c0_g1_i1 5.149461191 0.624179352 9.674743031 15.49994084 3.954190804 0.005973593 0.024668785 Up 0 0.2970347 0 0.5767595 1.72285 1.541002 AOQ10900.1 Fer2LCH-RA [synthetic construct] -- -- -- -- -- -- -- -- KOG2332 Ferritin [P] METABOLISM Inorganic ion transport and metabolism P ENOG4111Q26 ferritin -- PF00210.23 Ferritin-like domain TRINITY_DN32349_c0_g1_i1 8.697761239 17.39552248 0 0 #NAME? 4.74E-06 4.06E-05 Down 1.535114 2.410977 1.914804 2.70E-89 9.02E-74 2.51E-85 XP_021662247.1 "diaminopimelate decarboxylase 2, chloroplastic-like isoform X2 [Hevea brasiliensis]" Q949X7|DCDA1_ARATH "Diaminopimelate decarboxylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LYSA1 PE=1 SV=1" mus:103975560 K01586 lysA diaminopimelate decarboxylase ko00300 Lysine biosynthesis KOG0622 Ornithine decarboxylase [E] METABOLISM Amino acid transport and metabolism E COG0019 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (By similarity) Molecular Function: diaminopimelate decarboxylase activity (GO:0008836);|Biological Process: lysine biosynthetic process via diaminopimelate (GO:0009089);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570); -- -- TRINITY_DN32355_c0_g1_i1 8.030450599 0 16.0609012 Inf Inf 3.93E-06 3.42E-05 Up 0 0 0 2.042899 1.284512 2.409907 AOQ06363.1 "RpL10Ab-RA, partial [synthetic construct]" B8B9K6|R10A_ORYSI 60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1 fve:101309699 K02865 "RP-L10Ae, RPL10A" large subunit ribosomal protein L10Ae ko03010 Ribosome KOG1570 60S ribosomal protein L10A [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0081 "Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (By similarity)" Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: large ribosomal subunit (GO:0015934); PF00687.20 Ribosomal protein L1p/L10e family TRINITY_DN32358_c0_g1_i1 16.41786249 0 32.83572497 Inf Inf 6.09E-12 1.10E-10 Up 0 0 0 2.263786 1.764965 2.721113 AOQ03746.1 RpL13A-RB [synthetic construct] O42991|RL16B_SCHPO 60S ribosomal protein L16-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl1601 PE=1 SV=1 pxb:103942613 K02872 "RP-L13Ae, RPL13A" large subunit ribosomal protein L13Ae ko03010 Ribosome KOG3204 60S ribosomal protein L13a [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0102 "This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (By similarity)" Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: ribosome (GO:0005840);|Biological Process: negative regulation of translation (GO:0017148);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF00572.17 Ribosomal protein L13 TRINITY_DN32363_c0_g1_i1 2.370350877 0 4.740701755 Inf Inf 0.031673063 0.098521412 Up 0 0 0 0.8717739 1.100137 0 XP_021640293.1 uncharacterized protein LOC110635319 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32365_c0_g1_i1 11.64376578 20.36855389 2.918977679 0.143308047 -2.802808472 0.008650687 0.033776076 Down 1.962821 2.124081 0.5260219 0.2506566 0.2512396 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32367_c0_g1_i1 11.36172458 22.72344915 0 0 #NAME? 1.03E-07 1.13E-06 Down 2.837913 5.427294 3.509018 1.39E-83 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3236_c0_g1_i1 10.06921269 17.10695609 3.031469287 0.17720682 -2.496493967 0.004465413 0.019238658 Down 1.550438 2.285966 4.052432 0.4030096 0 0.7820953 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32375_c0_g1_i1 6.004589794 11.28470912 0.724470471 0.064199304 -3.961298533 0.016497155 0.057724148 Down 3.03672 0.5988784 1.424163 0 0.2074449 0 XP_011096945.1 thaumatin-like protein 1 [Sesamum indicum] A0A1P8B554|THLP1_ARATH Thaumatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=TLP1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YD5Y thaumatin-like protein Biological Process: defense response (GO:0006952);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to ethylene (GO:0009723); -- -- TRINITY_DN32380_c0_g1_i1 3.520878701 7.041757402 0 0 #NAME? 0.025994965 0.083829883 Down 2.699916 1.780245 0 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32384_c0_g1_i1 22.17260075 40.64937318 3.695828322 0.090919688 -3.459263458 1.40E-07 1.51E-06 Down 5.734015 5.898174 3.360017 0.5755782 0.2870902 0.2768951 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32385_c0_g1_i1 7.396750934 0 14.79350187 Inf Inf 1.01E-05 8.19E-05 Up 0 0 0 2.284246 2.878437 1.765698 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32386_c0_g1_i1 10.45545766 17.24145674 3.669458577 0.212827642 -2.232242557 0.013417907 0.048702946 Down 4.449792 3.971922 1.957466 0 1.382146 0.3791226 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32387_c0_g1_i1 7.710203621 2.120135906 13.30027134 6.273310735 2.649227025 0.00924682 0.035713513 Up 0.9033269 0 0.2331261 2.860138 1.679003 1.146777 PIN19355.1 RNA helicase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32391_c0_g1_i1 8.836402352 3.38933799 14.28346671 4.214234979 2.075270759 0.030039384 0.094319551 Up 0.4578032 0.4443283 0.7206946 1.251882 1.270431 2.951221 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32392_c0_g1_i1 8.411184105 2.346452671 14.47591554 6.169276592 2.625101329 0.011209841 0.041839198 Up 0 0.260047 0.837856 2.403609 1.620183 1.708066 AAX29470.1 "ubiquinol-cytochrome c reductase binding protein, partial [synthetic construct]" P49345|QCR7_KLULA Cytochrome b-c1 complex subunit 7 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=QCR7 PE=3 SV=1 pfj:MYCFIDRAFT_162782 K00417 "QCR7, UQCRB" ubiquinol-cytochrome c reductase subunit 7 ko00190 Oxidative phosphorylation KOG3440 "Ubiquinol cytochrome c reductase, subunit QCR7" [C] METABOLISM Energy production and conversion C ENOG4111V1G "component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain (By similarity)" "Cellular Component: mitochondrial respiratory chain complex III (GO:0005750);|Biological Process: mitochondrial electron transport, ubiquinol to cytochrome c (GO:0006122);|Molecular Function: ubiquinol-cytochrome-c reductase activity (GO:0008121);|Biological Process: aerobic respiration (GO:0009060);|Biological Process: mitochondrial respiratory chain complex III assembly (GO:0034551);" PF02271.15 Ubiquinol-cytochrome C reductase complex 14kD subunit TRINITY_DN32393_c0_g1_i1 5.930219416 11.13596836 0.724470471 0.0650568 -3.94215632 0.005017659 0.021263456 Down 1.535502 2.274853 1.447285 0 0.2479877 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32399_c0_g1_i1 23.97653546 12.34532021 35.60775072 2.884311635 1.528227049 0.003899589 0.017101155 Up 0.9090674 1.142755 0.7913897 1.614963 2.792751 2.119319 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32400_c0_g1_i1 7.874795253 13.04907208 2.700518427 0.206950993 -2.272638922 0.025579101 0.082747443 Down 2.099224 2.783018 1.571352 0 0 1.140818 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32403_c0_g1_i1 9.244485436 0 18.48897087 Inf Inf 3.53E-06 3.10E-05 Up 0 0 0 1.300808 3.689824 2.041005 ATO97532.1 "cytochrome c oxidase subunit Va, partial [synthetic construct]" Q01359|COX6_NEUCR "Cytochrome c oxidase subunit 6, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cox-6 PE=3 SV=2" shs:STEHIDRAFT_71985 K02264 COX5A cytochrome c oxidase subunit 5a ko00190 Oxidative phosphorylation KOG4077 "Cytochrome c oxidase, subunit Va/COX6" [C] METABOLISM Energy production and conversion O ENOG4111MPD cytoChrome c oxidase subunit "Molecular Function: cytochrome-c oxidase activity (GO:0004129);|Cellular Component: mitochondrial respiratory chain complex IV (GO:0005751);|Biological Process: mitochondrial electron transport, cytochrome c to oxygen (GO:0006123);|Molecular Function: metal ion binding (GO:0046872);" PF02284.15 Cytochrome c oxidase subunit Va TRINITY_DN32404_c0_g1_i1 10.46990081 20.93980162 0 0 #NAME? 4.01E-07 4.08E-06 Down 2.552634 1.070343 1.478272 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32412_c0_g1_i1 5.804471271 1.913103717 9.695838826 5.0681198 2.341450627 0.041542477 0.122299609 Up 0.4352326 0.4343689 0 1.042559 1.049725 1.375591 XP_012848862.1 PREDICTED: protein ENHANCED DOWNY MILDEW 2 [Erythranthe guttata] F4K3G5|EDM2_ARATH Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana OX=3702 GN=EDM2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: signal transduction (GO:0007165);|Biological Process: positive regulation of flower development (GO:0009911);|Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);|Biological Process: positive regulation of chromatin silencing (GO:0031937);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: regulation of DNA methylation (GO:0044030);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: defense response to fungus (GO:0050832);|Biological Process: positive regulation of histone H3-K27 methylation (GO:0061087);|Biological Process: heterochromatin maintenance (GO:0070829);|Biological Process: leaf pavement cell development (GO:0090436);|Biological Process: positive regulation of histone H3-K9 dimethylation (GO:1900111);|Biological Process: regulation of mRNA polyadenylation (GO:1900363);|Biological Process: regulation of leaf development (GO:2000024);" -- -- TRINITY_DN32417_c0_g1_i1 28.89819169 46.58867554 11.20770784 0.240567213 -2.055488064 4.60E-05 0.000328161 Down 2.952755 2.959738 3.099035 0.6340487 0.4196714 0.7530497 PIN04983.1 hypothetical protein CDL12_22478 [Handroanthus impetiginosus] Q4GZK7|ORR4_ORYSI Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=RR4 PE=2 SV=1 sind:105172179 K14492 ARR-A two-component response regulator ARR-A family ko04075 Plant hormone signal transduction KOG1601 GATA-4/5/6 transcription factors [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5641 Transcription factor Biological Process: phosphorelay signal transduction system (GO:0000160);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to cytokinin (GO:0009735);|Biological Process: cytokinin-activated signaling pathway (GO:0009736); -- -- TRINITY_DN32419_c0_g1_i1 10.13564895 3.288922092 16.98237581 5.163508083 2.368351565 0.021108774 0.070777854 Up 0.7182667 0.7071416 0.369575 1.001239 4.041733 2.026204 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32425_c0_g1_i1 11.81434296 22.85710922 0.771576693 0.03375653 -4.888689579 3.11E-06 2.75E-05 Down 2.804851 3.534791 2.568802 0 0 0.2488474 AKT44367.1 carboxylesterase [Tectona grandis] O64641|CXE9_ARATH Probable carboxylesterase 9 OS=Arabidopsis thaliana OX=3702 GN=CXE9 PE=2 SV=1 -- -- -- -- -- -- KOG1515 Arylacetamide deacetylase [V] CELLULAR PROCESSES AND SIGNALING Defense mechanisms I COG0657 alpha beta hydrolase fold-3 domain protein Molecular Function: carboxylic ester hydrolase activity (GO:0052689); -- -- TRINITY_DN32427_c0_g1_i1 2.472572391 4.945144781 0 0 #NAME? 0.036958846 0.11141406 Down 0.8946123 0.5867151 1.629799 0 0 0 BAI45925.1 "eukaryotic translation elongation factor 1 delta, partial [synthetic construct]" P78590|EF1B_CANAW Elongation factor 1-beta OS=Candida albicans (strain WO-1) OX=294748 GN=EFB1 PE=3 SV=1 cmt:CCM_01048 K03232 EEF1B elongation factor 1-beta -- -- KOG1668 Elongation factor 1 beta/delta chain [K] INFORMATION STORAGE AND PROCESSING Transcription J COG2092 "Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA (By similarity)" Molecular Function: translation elongation factor activity (GO:0003746);|Cellular Component: eukaryotic translation elongation factor 1 complex (GO:0005853); PF10587.8 Eukaryotic elongation factor 1 beta central acidic region TRINITY_DN32432_c0_g1_i1 28.24180335 56.4836067 0 0 #NAME? 2.42E-18 7.12E-17 Down 4.83059 5.208957 5.560335 0 0 0 ABM85562.1 "ribosomal protein L13, partial [synthetic construct]" Q9FF90|RL133_ARATH 60S ribosomal protein L13-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13D PE=1 SV=1 smo:SELMODRAFT_266648 K02873 "RP-L13e, RPL13" large subunit ribosomal protein L13e ko03010 Ribosome KOG3295 60S Ribosomal protein L13 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG4352 cytoplasmic translation Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626); PF01294.17 Ribosomal protein L13e TRINITY_DN32433_c0_g1_i1 9.751068248 19.5021365 0 0 #NAME? 1.05E-06 1.01E-05 Down 2.474545 3.221483 2.653707 0 0 0 SJX26878.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" Q9FNP8|RS193_ARATH 40S ribosomal protein S19-3 OS=Arabidopsis thaliana OX=3702 GN=RPS19C PE=2 SV=1 ppp:PHYPADRAFT_186874 K02966 "RP-S19e, RPS19" small subunit ribosomal protein S19e ko03010 Ribosome KOG3411 40S ribosomal protein S19 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2238 Ribosomal protein Biological Process: ribosomal small subunit assembly (GO:0000028);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: vacuole (GO:0005773);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Cellular Component: polysomal ribosome (GO:0042788); PF01090.18 Ribosomal protein S19e TRINITY_DN32435_c0_g1_i1 7.224086236 1.116257443 13.33191503 11.94340527 3.578142327 0.034841608 0.106416709 Up 0 0.4220131 0.3407231 4.237058 0.8375622 1.345378 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32444_c0_g1_i1 8.477301517 3.164142325 13.79046071 4.358356638 2.123784255 0.036012001 0.109241605 Up 0.12087 0.2346832 0.7426824 1.092238 1.189162 1.558523 XP_011083578.1 acyl transferase 5 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGZI Transferase Family -- PF02458.14 Transferase family TRINITY_DN32445_c0_g1_i1 6.664738196 13.32947639 0 0 #NAME? 9.04E-05 0.000604869 Down 1.866174 2.395021 2.197735 0 0 0 XP_011070477.1 46 kDa FK506-binding nuclear protein [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32453_c0_g1_i1 9.236949543 3.375816103 15.09808298 4.472424599 2.16105716 0.019128669 0.065369847 Up 0.2313297 0.4540343 0.5245875 1.23994 2.486977 0.9432995 XP_012851377.1 PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like [Erythranthe guttata] P0CH01|AT21A_ARATH Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transferase activity (GO:0016740);|Molecular Function: polysaccharide binding (GO:0030247);|Molecular Function: metal ion binding (GO:0046872); PF13947.5 Wall-associated receptor kinase galacturonan-binding TRINITY_DN32455_c0_g1_i1 4.207027644 8.414055289 0 0 #NAME? 0.002970983 0.013545782 Down 1.451459 1.110463 2.282097 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32459_c0_g1_i1 6.786216326 13.57243265 0 0 #NAME? 7.21E-05 0.000492425 Down 2.1677 0.5994112 2.317997 0 0 0 XP_011087826.1 uncharacterized protein LOC105169179 isoform X1 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG4443 "Putative transcription factor HALR/MLL3, involved in embryonic development" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS5Z PHD -- -- -- TRINITY_DN32463_c0_g1_i1 5.987450853 1.872538056 10.10236365 5.395011129 2.431625936 0.034507514 0.105609466 Up 0 1.048583 0 0.4876682 1.97511 2.574324 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32467_c0_g1_i1 9.848014338 2.186186536 17.50984214 8.009308379 3.001677668 0.000992175 0.005185699 Up 0.546607 0.1313444 0.1022341 1.485662 1.332833 1.70583 SJX32530.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" A8HS48|RS3A_CHLRE 40S ribosomal protein S3a OS=Chlamydomonas reinhardtii OX=3055 GN=CHLREDRAFT_168484 PE=3 SV=1 cre:CHLREDRAFT_168484 K02984 "RP-S3Ae, RPS3A" small subunit ribosomal protein S3Ae ko03010 Ribosome KOG1628 40S ribosomal protein S3A [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1890 Ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF01015.17 Ribosomal S3Ae family TRINITY_DN32468_c0_g1_i1 4.796947558 0 9.593895116 Inf Inf 0.000655014 0.003586616 Up 0 0 0 0.9550751 0.8644447 0.509496 ACL88534.1 "Cp1-PA, partial [synthetic construct]" Q9FMH8|RD21B_ARATH Probable cysteine protease RD21B OS=Arabidopsis thaliana OX=3702 GN=RD21B PE=1 SV=1 -- -- -- -- -- -- KOG1543 Cysteine proteinase Cathepsin L [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG4870 cathepsin Molecular Function: cysteine-type endopeptidase activity (GO:0004197);|Cellular Component: extracellular space (GO:0005615);|Cellular Component: lysosome (GO:0005764);|Cellular Component: vacuole (GO:0005773);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: cytosol (GO:0005829);|Biological Process: response to salt stress (GO:0009651);|Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603); "PF00112.22,PF03051.14" Papain family cysteine protease|Peptidase C1-like family TRINITY_DN3246_c0_g1_i1 5.899473283 10.69641901 1.102527553 0.103074454 -3.278241271 0.013374308 0.04857659 Down 1.413806 2.383259 1.074057 0.3840048 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32471_c0_g1_i1 11.93302389 19.46157084 4.404476946 0.226316621 -2.143585554 0.008617466 0.033672432 Down 2.112241 3.839239 2.688473 0.2424689 0.9861749 0.2741375 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32474_c0_g1_i1 13.09075884 26.18151768 0 0 #NAME? 7.07E-09 9.09E-08 Down 1.769648 3.094817 3.157616 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32479_c0_g1_i1 24.3744091 35.44890618 13.29991202 0.375185399 -1.41432441 0.010399997 0.039324203 Down 9.028434 7.19536 5.257932 1.633043 3.232729 1.629949 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32482_c0_g1_i1 4.326891013 0 8.653782026 Inf Inf 0.007971762 0.031504633 Up 0 0 0 1.986422 0 1.931101 KPV75562.1 hypothetical protein RHOBADRAFT_65035 [Rhodotorula graminis WP1] Q8X169|GLNA_AMAMU Glutamine synthetase OS=Amanita muscaria OX=41956 GN=GLN1 PE=2 SV=2 scm:SCHCODRAFT_80259 K01915 "glnA, GLUL" glutamine synthetase ko00910|ko00630|ko00250|ko00220 "Nitrogen metabolism|Glyoxylate and dicarboxylate metabolism|Alanine, aspartate and glutamate metabolism|Arginine biosynthesis" KOG0683 Glutamine synthetase [E] METABOLISM Amino acid transport and metabolism E COG0174 glutamine synthetase Molecular Function: glutamate-ammonia ligase activity (GO:0004356);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: glutamine biosynthetic process (GO:0006542); -- -- TRINITY_DN32484_c0_g1_i1 9.920416121 19.84083224 0 0 #NAME? 8.01E-06 6.60E-05 Down 1.192276 4.062319 3.395465 1.08E-57 1.97E-91 4.44E-88 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32485_c0_g1_i1 3.607772712 7.215545424 0 0 #NAME? 0.008300542 0.032616561 Down 1.737455 1.674377 0.8691445 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32487_c0_g1_i1 33.30612991 6.871770385 59.74048944 8.693609666 3.119955322 4.59E-10 6.79E-09 Up 0.4482588 0.2676966 0.4623255 2.747132 2.842349 2.561244 PHU15806.1 hypothetical protein BC332_17011 [Capsicum chinense] Q9S7T7|SCC11_ARATH Sister chromatid cohesion 1 protein 1 OS=Arabidopsis thaliana OX=3702 GN=SYN1 PE=2 SV=2 -- -- -- -- -- -- KOG1213 "Sister chromatid cohesion complex Cohesin, subunit RAD21/SCC1" [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " S ENOG410XRB4 Doublestrandbreak repair protein rad21 "Cellular Component: nuclear chromosome (GO:0000228);|Molecular Function: chromatin binding (GO:0003682);|Cellular Component: chromosome (GO:0005694);|Biological Process: double-strand break repair (GO:0006302);|Biological Process: sister chromatid cohesion (GO:0007062);|Cellular Component: cohesin complex (GO:0008278);|Biological Process: meiotic chromosome condensation (GO:0010032);|Biological Process: chromosome organization (GO:0051276);|Biological Process: attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation (GO:0051455);|Biological Process: meiotic sister chromatid cohesion, centromeric (GO:0051754);" -- -- TRINITY_DN3248_c0_g1_i1 5.336131872 0.984156182 9.688107561 9.844075294 3.299255693 0.0199624 0.067709276 Up 0 0 0.5309565 1.997924 1.00827 1.804057 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32491_c0_g1_i1 4.944584231 9.889168462 0 0 #NAME? 0.001113059 0.005740834 Down 2.181819 0.7172147 1.543221 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32492_c0_g1_i1 11.91543056 23.83086112 0 0 #NAME? 4.53E-08 5.25E-07 Down 3.407986 1.855243 2.721515 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32496_c0_g1_i1 12.96328176 25.92656351 0 0 #NAME? 0.014800177 0.052812235 Down 0 12.05061 4.405003 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32498_c0_g1_i1 12.71359938 25.42719875 0 0 #NAME? 1.49E-08 1.84E-07 Down 3.891579 7.427414 4.483116 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32500_c0_g1_i1 14.46840613 25.16259335 3.77421892 0.149993241 -2.737030607 0.000235736 0.001439242 Down 1.48577 1.102635 2.407684 0.09111419 0.09009952 0.3840837 OIT22378.1 transcription factor rf2a [Nicotiana attenuata] -- -- -- -- -- -- -- -- -- -- -- -- -- K ENOG410YAHK Transcription factor -- -- -- TRINITY_DN32501_c0_g1_i1 3.516586912 6.670938589 0.362235236 0.05430049 -4.202890968 0.036426974 0.110161869 Down 1.684096 1.091466 0.6405825 0 0.2151353 0 ABM84518.1 Rho guanine nucleotide exchange factor (GEF) 1 [synthetic construct] -- -- -- -- -- -- -- -- KOG3520 Predicted guanine nucleotide exchange factor [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG5422 guanine nucleotide exchange factor -- -- -- TRINITY_DN32507_c0_g1_i1 6.132749067 10.81655719 1.448940942 0.133955834 -2.900170678 0.022383199 0.074250259 Down 2.314469 2.270924 1.178595 0 0.5718458 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32508_c0_g1_i1 307.4293306 54.97696535 559.8816958 10.18393235 3.348222836 1.62E-73 2.94E-71 Up 6.387287 4.951543 3.407452 40.13514 44.08928 36.75736 XP_011070106.1 14 kDa proline-rich protein DC2.15-like [Sesamum indicum] Q39176|ERLI1_ARATH Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YRRT 14 kDa proline-rich protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: endoplasmic reticulum (GO:0005783);|Biological Process: response to cold (GO:0009409);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to salt stress (GO:0009651);|Biological Process: induced systemic resistance (GO:0009682);|Cellular Component: chloroplast outer membrane (GO:0009707);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: defense response to fungus (GO:0050832); "PF14547.5,PF00234.21" Hydrophobic seed protein|Protease inhibitor/seed storage/LTP family TRINITY_DN32512_c0_g1_i1 3.520878701 7.041757402 0 0 #NAME? 0.025994965 0.083829883 Down 2.708005 1.807664 0 0 0 0 KHN26133.1 "Carbonic anhydrase, chloroplastic [Glycine soja]" Q94CE3|BCA5_ARATH "Beta carbonic anhydrase 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCA5 PE=2 SV=1" gmx:100812124 K01673 "cynT, can" carbonic anhydrase ko00910 Nitrogen metabolism KOG1578 Predicted carbonic anhydrase involved in protection against oxidative damage [P] METABOLISM Inorganic ion transport and metabolism P COG0288 carbonic anhydrase Molecular Function: carbonate dehydratase activity (GO:0004089);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: chloroplast (GO:0009507);|Biological Process: response to carbon dioxide (GO:0010037);|Biological Process: regulation of stomatal movement (GO:0010119);|Biological Process: carbon utilization (GO:0015976); PF00484.18 Carbonic anhydrase TRINITY_DN32513_c0_g1_i1 5.791638453 11.58327691 0 0 #NAME? 0.000388765 0.002258046 Down 2.472507 0.6434466 1.172748 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32517_c0_g1_i1 5.310542603 10.62108521 0 0 #NAME? 0.000579358 0.003218945 Down 1.357659 0.7467277 1.927479 0 0 0 PIN08820.1 hypothetical protein CDL12_18601 [Handroanthus impetiginosus] Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 pper:PRUPE_ppa016506mg K17604 ZSWIM3 zinc finger SWIM domain-containing protein 3 -- -- -- -- -- -- -- -- -- -- "Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Molecular Function: zinc ion binding (GO:0008270);" PF04434.16 SWIM zinc finger TRINITY_DN32522_c0_g1_i1 8.346445854 16.69289171 0 0 #NAME? 3.45E-05 0.000252639 Down 0.5803652 1.958552 2.177387 0 1.57E-95 1.11E-81 BAV56712.1 transposase [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41105SS NA -- PF13963.5 Transposase-associated domain TRINITY_DN32527_c0_g1_i1 3.261878319 6.523756637 0 0 #NAME? 0.013266421 0.048253416 Down 0.5093167 1.45814 0.5910599 0 0 0 PIM99751.1 Hydroxyindole-O-methyltransferase [Handroanthus impetiginosus] B0ZB57|OMT3_HUMLU Probable O-methyltransferase 3 OS=Humulus lupulus OX=3486 GN=OMT3 PE=2 SV=1 -- -- -- -- -- -- KOG3178 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS7T o-methyltransferase Molecular Function: O-methyltransferase activity (GO:0008171);|Molecular Function: protein dimerization activity (GO:0046983); PF00891.17 O-methyltransferase TRINITY_DN3252_c0_g1_i1 7.47057069 2.699108008 12.24203337 4.535584844 2.181288592 0.041273935 0.121644222 Up 0.5182729 0 0.82167 1.474727 1.936301 1.512388 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32530_c0_g1_i1 7.233964008 13.36540046 1.102527553 0.082491172 -3.59961645 0.002583241 0.012004613 Down 2.376636 1.169424 2.507319 0.3893211 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32532_c0_g1_i1 7.262505281 11.89760878 2.627401778 0.22083444 -2.178962909 0.049209503 0.139863939 Down 0.9893256 1.445931 3.507307 0.5263075 0 0.5209275 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32539_c0_g1_i1 12.52507412 21.35959386 3.690554373 0.172782048 -2.532974765 0.006312252 0.025823006 Down 1.670952 4.863914 2.424003 0.5232288 0.519962 0.2914527 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32544_c0_g1_i1 4.84000849 0 9.680016979 Inf Inf 0.000635208 0.00348916 Up 0 0 0 0.5939205 1.173712 1.242215 XP_016195043.1 uncharacterized protein LOC107636017 [Arachis ipaensis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN32550_c0_g1_i1 10.59369973 21.18739947 0 0 #NAME? 0.000205021 0.001271906 Down 5.222345 1.144164 2.858227 0 0 0 XP_022883012.1 uncharacterized protein LOC111399770 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z5JU NA -- -- -- TRINITY_DN32553_c0_g1_i1 3.477992246 6.955984491 0 0 #NAME? 0.010116137 0.03841086 Down 1.241807 1.438138 0.5704861 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32554_c0_g1_i1 8.256670498 16.513341 0 0 #NAME? 8.95E-06 7.31E-05 Down 1.774103 1.565848 1.742902 0 0 0 XP_020092846.1 uncharacterized protein LOC109713256 [Ananas comosus] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" -- -- TRINITY_DN32561_c0_g1_i1 14.82775374 29.65550748 0 0 #NAME? 7.33E-10 1.06E-08 Down 4.758081 4.623467 3.865335 0 4.66E-22 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32565_c0_g1_i1 2.795083757 5.590167514 0 0 #NAME? 0.021783732 0.072547979 Down 0.3154603 0.6237634 1.660832 0 0 0 ATG71373.1 RNA-directed RNA polymerase L [synthetic Human respiratory syncytial virus A] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00946.18 Mononegavirales RNA dependent RNA polymerase TRINITY_DN32566_c0_g1_i1 10.92112314 2.604892503 19.23735377 7.385085468 2.884614618 0.00057557 0.003200399 Up 1.355617 0 0 2.95243 3.385923 2.209127 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32571_c0_g1_i1 2.91810328 5.836206559 0 0 #NAME? 0.022847243 0.075497191 Down 0.3452449 0.6669015 2.159689 0 0 0 XP_022891840.1 uncharacterized protein LOC111406687 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32573_c0_g1_i1 2.862894632 5.725789263 0 0 #NAME? 0.027337886 0.087427691 Down 1.531391 1.741776 0 0 0 0 KRG98349.1 hypothetical protein GLYMA_18G067500 [Glycine max] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YR10 expressed protein -- -- -- TRINITY_DN32575_c0_g1_i1 9.481085625 18.96217125 0 0 #NAME? 1.71E-06 1.58E-05 Down 3.307187 4.824245 2.598199 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32577_c0_g1_i1 19.38386648 34.21138946 4.556343511 0.133182065 -2.908528275 0.000152504 0.000973099 Down 8.174346 6.027197 3.209926 0.6182123 0 1.241423 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32584_c0_g1_i1 23.42592845 2.232514886 44.61934202 19.98613415 4.320927538 2.12E-05 0.000161414 Up 0 0.6551305 0.5413367 4.571247 10.14446 4.648987 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32585_c0_g1_i1 2.897259899 5.794519798 0 0 #NAME? 0.021552364 0.071914618 Down 1.262401 1.228804 1.276553 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32587_c0_g1_i1 3.557771635 0 7.115543271 Inf Inf 0.005045921 0.021354606 Up 0 0 0 0.6462044 0.8098481 1.362459 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32597_c0_g1_i1 6.704524454 13.40904891 0 0 #NAME? 8.73E-05 0.000586583 Down 2.44067 3.010011 2.430198 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32600_c0_g1_i1 9.90388078 2.27928094 17.52848062 7.690355458 2.943050283 0.002730744 0.012611322 Up 1.250451 0 0 3.68862 1.039266 2.739605 AOQ04091.1 "Ca-P60A-RB, partial [synthetic construct]" Q9SY55|ECA3_ARATH "Calcium-transporting ATPase 3, endoplasmic reticulum-type OS=Arabidopsis thaliana OX=3702 GN=ECA3 PE=2 SV=3" -- -- -- -- -- -- KOG0202 Ca2+ transporting ATPase [P] METABOLISM Inorganic ion transport and metabolism P COG0474 P-type atpase "Cellular Component: Golgi membrane (GO:0000139);|Molecular Function: calcium-transporting ATPase activity (GO:0005388);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: endosome (GO:0005768);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Biological Process: calcium ion transport (GO:0006816);|Biological Process: cellular calcium ion homeostasis (GO:0006874);|Molecular Function: proton-exporting ATPase activity, phosphorylative mechanism (GO:0008553);|Cellular Component: endomembrane system (GO:0012505);|Molecular Function: manganese-transporting ATPase activity (GO:0015410);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: late endosome membrane (GO:0031902);|Cellular Component: sarcoplasmic reticulum membrane (GO:0033017);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: root development (GO:0048364);|Biological Process: manganese ion homeostasis (GO:0055071);|Biological Process: calcium ion transmembrane transport (GO:0070588);" "PF00689.20,PF08282.11" "Cation transporting ATPase, C-terminus|haloacid dehalogenase-like hydrolase" TRINITY_DN32602_c0_g1_i1 4.443625842 8.887251684 0 0 #NAME? 0.018004535 0.062070316 Down 1.364776 2.032349 0 0 0 0 KRG97356.1 hypothetical protein GLYMA_18G002800 [Glycine max] Q93WN0|SEBP2_ARATH Selenium-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=SBP2 PE=1 SV=1 gmx:100794235 K17285 SELENBP1 selenium-binding protein 1 -- -- KOG0918 Selenium-binding protein [P] METABOLISM Inorganic ion transport and metabolism S ENOG410XP4F selenium-binding protein Molecular Function: selenium binding (GO:0008430);|Biological Process: polar nucleus fusion (GO:0010197); PF05694.10 56kDa selenium binding protein (SBP56) TRINITY_DN32616_c0_g1_i1 20.70381506 5.169219346 36.23841077 7.010422338 2.809501361 0.019097574 0.06527341 Up 2.060608 0.5055373 0 3.312344 2.244753 8.943546 PNX92843.1 gag-protease polyprotein [Trifolium pratense] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN32619_c0_g1_i1 9.486908861 15.23369981 3.740117911 0.245516057 -2.026110713 0.028447985 0.090335039 Down 2.238261 4.391676 1.748557 0 0.8569577 0.8733889 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32626_c0_g1_i1 7.625801129 1.714951826 13.53665043 7.893312356 2.980630841 0.027825395 0.088711767 Up 0.5209533 8.05E-84 0.4065616 2.269192 3.914861 0.5982417 XP_011097020.1 berberine bridge enzyme-like 18 [Sesamum indicum] A6P6V9|CBDAS_CANSA Cannabidiolic acid synthase OS=Cannabis sativa OX=3483 GN=CBDAS PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: apoplast (GO:0048046);|Molecular Function: FAD binding (GO:0071949);|Molecular Function: cannabidiolate synthase activity (GO:0102779); -- -- TRINITY_DN32628_c0_g1_i1 5.724794752 0.651223126 10.79836638 16.5816691 4.051517329 0.002814859 0.012952347 Up 0.449492 0 0 1.869225 1.387777 1.901919 XP_024460929.1 pleiotropic drug resistance protein 1 isoform X1 [Populus trichocarpa] Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum OX=4097 GN=PDR1 PE=2 SV=1 -- -- -- -- -- -- KOG0065 "Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG0842 (ABC) transporter Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887); -- -- TRINITY_DN32629_c0_g1_i1 8.254775954 14.23138015 2.278171756 0.160080873 -2.643127157 0.010027007 0.038133038 Down 2.25868 3.481183 1.747997 0.2787755 8.98E-77 0.6266329 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32631_c0_g1_i1 4.83740739 9.674814779 0 0 #NAME? 0.001449275 0.007254048 Down 2.035499 1.004103 0.7883787 0 0 0 XP_020553086.1 uncharacterized protein LOC110012719 [Sesamum indicum] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN32638_c0_g1_i1 5.21788244 8.892611493 1.543153387 0.173532082 -2.526725687 0.046656904 0.134052589 Down 1.324409 1.299022 2.626514 0 0 0.6631589 PRQ42351.1 putative RNA-directed DNA polymerase [Rosa chinensis] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN32643_c0_g1_i1 5.430183267 0.492078091 10.36828844 21.07041266 4.397146664 0.003809188 0.016784164 Up 0 0 0.16832 1.555091 0.5887253 0.6006423 ACL87652.1 "CG7911-PA, partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41120AT Nucleoplasmin -- PF03066.14 Nucleoplasmin/nucleophosmin domain TRINITY_DN32645_c0_g1_i1 5.068411988 0 10.13682398 Inf Inf 0.002501873 0.011674295 Up 3.67E-77 1.73E-77 1.44E-74 1.572542 0.1566557 1.481762 XP_022889504.1 uncharacterized protein LOC111405046 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN32646_c0_g1_i1 9.422356489 18.84471298 0 0 #NAME? 1.52E-06 1.42E-05 Down 2.157309 4.190256 3.823688 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32647_c0_g1_i1 7.759372856 15.51874571 0 0 #NAME? 0.000110182 0.000724017 Down 1.211903 3.061875 1.068822 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32649_c0_g1_i1 9.091744226 18.18348845 0 0 #NAME? 3.09E-06 2.74E-05 Down 2.883175 5.590416 2.293901 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3264_c0_g1_i1 49.26217183 1.801845837 96.72249783 53.6796744 5.746304016 6.48E-27 3.16E-25 Up 0.02561882 0 0.1144619 1.649252 2.233393 2.29775 BAJ20983.1 "heat shock protein 90kDa alpha (cytosolic), class A member 1, partial [synthetic construct]" P27323|HS901_ARATH Heat shock protein 90-1 OS=Arabidopsis thaliana OX=3702 GN=HSP90-1 PE=1 SV=3 pxb:103966141 K04079 "htpG, HSP90A" molecular chaperone HtpG ko04141|ko04626 Protein processing in endoplasmic reticulum|Plant-pathogen interaction KOG0019 Molecular chaperone (HSP90 family) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0326 Molecular chaperone. Has ATPase activity (By similarity) "Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);|Molecular Function: unfolded protein binding (GO:0051082);|Biological Process: chaperone-mediated protein folding (GO:0061077);" "PF00183.17,PF02518.25,PF13589.5" "Hsp90 protein|Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase|Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" TRINITY_DN32651_c0_g1_i1 10.20731265 1.794524343 18.62010096 10.37606485 3.375187497 0.000311524 0.001852373 Up 0.534983 0 0.2008965 2.10628 2.090982 2.478813 ACL91375.1 RpL28-PA [synthetic construct] O82204|RL281_ARATH 60S ribosomal protein L28-1 OS=Arabidopsis thaliana OX=3702 GN=RPL28A PE=1 SV=1 -- -- -- -- -- -- KOG3412 60S ribosomal protein L28 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J ENOG4111T32 protein complex subunit organization Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cell wall (GO:0005618);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: chloroplast (GO:0009507);|Biological Process: response to cytokinin (GO:0009735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626); PF01778.16 Ribosomal L28e protein family TRINITY_DN32652_c0_g1_i1 20.75736389 31.81888895 9.695838826 0.304719591 -1.714445838 0.003487051 0.015550419 Down 4.680217 2.93923 4.146907 0.9236001 0.884245 1.125374 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32653_c0_g1_i1 86.7239682 26.36038499 147.0875514 5.579871138 2.480231805 5.52E-17 1.48E-15 Up 2.746371 3.141087 3.004572 11.87638 14.65703 13.71512 XP_011078506.2 RING-H2 finger protein ATL3-like [Sesamum indicum] Q9SI09|XERIC_ARATH Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1 -- -- -- -- -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Biological Process: response to osmotic stress (GO:0006970);|Biological Process: response to salt stress (GO:0009651);|Biological Process: abscisic acid metabolic process (GO:0009687);|Biological Process: abscisic acid biosynthetic process (GO:0009688);|Biological Process: response to gibberellin (GO:0009739);|Biological Process: response to chitin (GO:0010200);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transferase activity (GO:0016740);|Molecular Function: metal ion binding (GO:0046872); "PF13639.5,PF17123.4,PF13923.5,PF00097.24,PF12678.6,PF14634.5" "Ring finger domain|RING-like zinc finger|Zinc finger, C3HC4 type (RING finger)|Zinc finger, C3HC4 type (RING finger)|RING-H2 zinc finger domain|zinc-RING finger domain" TRINITY_DN32669_c0_g1_i1 20.16914524 30.93402757 9.404262924 0.304010298 -1.717807903 0.004199925 0.018261227 Down 8.702273 4.314441 5.35108 1.406858 0.702959 2.429898 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32672_c0_g1_i1 6.22559737 0 12.45119474 Inf Inf 0.001286118 0.006522259 Up 0 0 0 0.8198392 1.239306 3.466826 ATO94476.1 "Finkel-Biskis-Reilly murine sarcoma virus ubiquitously expressed (fox derived), partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- J ENOG41123KC 40s ribosomal protein s30 -- -- -- TRINITY_DN32673_c0_g1_i1 14.96191197 29.19935346 0.724470471 0.024811182 -5.332865727 4.79E-08 5.51E-07 Down 5.418718 3.499462 4.14013 0 0.2058368 0 ATO96043.1 "ribosomal protein S23, partial [synthetic construct]" P46297|RS23_FRAAN 40S ribosomal protein S23 OS=Fragaria ananassa OX=3747 GN=RPS23 PE=2 SV=1 bvg:104886853 K02973 "RP-S23e, RPS23" small subunit ribosomal protein S23e ko03010 Ribosome KOG1749 40S ribosomal protein S23 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0048 "Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: small ribosomal subunit (GO:0015935); PF00164.24 Ribosomal protein S12/S23 TRINITY_DN32674_c0_g1_i1 5.243931422 10.48786284 0 0 #NAME? 0.001732074 0.008483389 Down 3.316953 0.5377042 2.136903 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32678_c0_g1_i1 3.75395641 7.507912819 0 0 #NAME? 0.006165973 0.02532043 Down 0.668452 1.944095 1.247153 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32680_c0_g1_i1 12.83569924 25.67139848 0 0 #NAME? 0.005030115 0.021303604 Down 3.820307 6.616303 0 0 0 0 ACU24050.1 unknown [Glycine max] Q9ZQ80|NDRP1_ARATH Nodulin-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=NRP1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZPSX NA Biological Process: defense response (GO:0006952);|Biological Process: response to heat (GO:0009408);|Biological Process: response to cold (GO:0009409);|Biological Process: response to bacterium (GO:0009617);|Biological Process: response to salt stress (GO:0009651);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: positive regulation of defense response to bacterium (GO:1900426); -- -- TRINITY_DN32682_c0_g1_i1 19.67339297 38.98455071 0.362235236 0.009291764 -6.74983181 9.22E-12 1.64E-10 Down 4.421051 7.023872 5.836701 0 0.1663824 0 SJX26538.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" P49211|RL321_ARATH 60S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2 sind:105170533 K02912 "RP-L32e, RPL32" large subunit ribosomal protein L32e ko03010 Ribosome KOG0878 60S ribosomal protein L32 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1717 (ribosomal) protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: polysomal ribosome (GO:0042788); PF01655.17 Ribosomal protein L32 TRINITY_DN32688_c0_g1_i1 8.965423067 17.93084613 0 0 #NAME? 2.69E-06 2.41E-05 Down 1.875492 1.839516 3.284936 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32694_c0_g1_i1 3.612212861 7.224425722 0 0 #NAME? 0.007589644 0.030226066 Down 2.002578 0.4834539 1.594383 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32699_c0_g1_i1 8.416481513 16.46545384 0.367509184 0.022320015 -5.485518163 5.74E-05 0.000401008 Down 1.654018 1.717767 1.351882 0.1041093 0 0 XP_012853094.1 PREDICTED: uncharacterized protein LOC105972664 [Erythranthe guttata] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN32705_c0_g1_i1 7.918492114 2.904581393 12.93240283 4.452415369 2.154588189 0.038931225 0.116110717 Up 0 0.3865031 0.7497752 0.9040567 1.978988 1.143038 XP_012836724.1 PREDICTED: zinc finger protein AZF1-like [Erythranthe guttata] Q9SSW2|AZF2_ARATH Zinc finger protein AZF2 OS=Arabidopsis thaliana OX=3702 GN=AZF2 PE=2 SV=1 -- -- -- -- -- -- KOG1721 FOG: Zn-finger [R] POORLY CHARACTERIZED General function prediction only S COG5048 Zinc finger protein "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: response to water deprivation (GO:0009414);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: abscisic acid-activated signaling pathway (GO:0009738);|Biological Process: embryo development ending in seed dormancy (GO:0009793);|Biological Process: response to chitin (GO:0010200);|Biological Process: hyperosmotic salinity response (GO:0042538);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);|Molecular Function: metal ion binding (GO:0046872);" "PF13912.5,PF13894.5,PF12171.7,PF00096.25" "C2H2-type zinc finger|C2H2-type zinc finger|Zinc-finger double-stranded RNA-binding|Zinc finger, C2H2 type" TRINITY_DN32712_c0_g1_i1 15.92140756 31.84281512 0 0 #NAME? 1.34E-10 2.10E-09 Down 5.112885 5.46322 5.344693 0 0 0 AAX29073.1 "ribosomal protein S25, partial [synthetic construct]" Q8GYL5|RS253_ARATH 40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2 bdi:100833253 K02975 "RP-S25e, RPS25" small subunit ribosomal protein S25e ko03010 Ribosome KOG1767 40S ribosomal protein S25 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG4901 Ribosomal protein S25 Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF03297.14 S25 ribosomal protein TRINITY_DN32713_c0_g1_i1 8.206462549 16.4129251 0 0 #NAME? 1.02E-05 8.21E-05 Down 3.750048 3.085897 2.931139 0 0 0 CAN61230.1 hypothetical protein VITISV_010115 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN32716_c0_g1_i1 5.963307121 11.92661424 0 0 #NAME? 0.000253926 0.001541385 Down 1.437636 2.528949 1.732839 0 7.21E-84 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32733_c0_g1_i1 4.876685214 8.596005388 1.15736504 0.134639869 -2.892822416 0.043532649 0.126964633 Down 1.589642 2.788692 0.6122847 2.66E-86 2.73E-29 0.526009 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32735_c0_g1_i1 6.076547438 0 12.15309488 Inf Inf 8.27E-05 0.000558349 Up 0 0 0 1.683111 2.404141 1.006277 ACL84952.1 "CG5210-PA, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG2806 Chitinase [G] METABOLISM Carbohydrate transport and metabolism G COG3325 chitinase -- PF00704.27 Glycosyl hydrolases family 18 TRINITY_DN32739_c0_g1_i1 3.127514041 0 6.255028081 Inf Inf 0.009540955 0.036653062 Up 0 0 0 0.6772033 1.192228 0.4201851 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32744_c0_g1_i1 8.832327499 3.12089676 14.54375824 4.660121548 2.220367585 0.014493554 0.051942671 Up 0 1.676189 0 1.828977 1.824911 2.58132 ACL86357.1 "RpS28b-PA, partial [synthetic construct]" P33285|RS28_KLULA 40S ribosomal protein S28 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=RPS28 PE=1 SV=1 csl:COCSUDRAFT_33870 K02979 "RP-S28e, RPS28" small subunit ribosomal protein S28e ko03010 Ribosome KOG3502 40S ribosomal protein S28 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2053 Ribosomal protein "Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: rRNA export from nucleus (GO:0006407);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Biological Process: positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (GO:1900153);" -- -- TRINITY_DN32750_c0_g1_i1 9.901131545 19.80226309 0 0 #NAME? 8.47E-07 8.24E-06 Down 2.130657 1.902554 1.895292 0 0 0 ADQ31996.1 "ribosomal protein S8, partial [synthetic construct]" Q9FIF3|RS82_ARATH 40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1 ppl:POSPLDRAFT_110841 K02995 "RP-S8e, RPS8" small subunit ribosomal protein S8e ko03010 Ribosome KOG3283 40S ribosomal protein S8 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2007 40S ribosomal protein S8 "Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);" PF01201.21 Ribosomal protein S8e TRINITY_DN32751_c0_g1_i1 16.40584468 2.207029917 30.60465944 13.86689832 3.793573223 8.73E-07 8.47E-06 Up 0.1375249 0 0.2085939 1.29029 1.009992 1.55812 ACL91086.1 Act5C-PA [synthetic construct] P53689|ACT_PHARH Actin OS=Phaffia rhodozyma OX=5421 PE=3 SV=1 pgr:PGTG_05488 K05692 ACTB_G1 actin beta/gamma 1 ko04145 Phagosome KOG0676 Actin and related proteins [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5277 Actin-related protein Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytoskeleton (GO:0005856); PF00022.18 Actin TRINITY_DN32754_c0_g1_i1 277.7306702 547.9811046 7.480235822 0.013650536 -6.194898584 6.07E-136 2.32E-133 Down 79.52834 77.07932 80.22712 0 1.294788 1.367086 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32755_c0_g1_i1 12.26583366 23.44496162 1.086705707 0.046351354 -4.431244719 5.88E-06 4.96E-05 Down 3.616232 3.725861 4.609105 0 0.3935568 0 AIC49625.1 "RPL31, partial [synthetic construct]" Q9XGL4|RL31_CYAPA 60S ribosomal protein L31 OS=Cyanophora paradoxa OX=2762 GN=RPL31 PE=3 SV=1 gsl:Gasu_29510 K02910 "RP-L31e, RPL31" large subunit ribosomal protein L31e ko03010 Ribosome KOG0893 60S ribosomal protein L31 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2097 (ribosomal) protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF01198.18 Ribosomal protein L31e TRINITY_DN32757_c0_g1_i1 21.28839109 30.25108425 12.32569792 0.407446484 -1.295317513 0.024534352 0.080000564 Down 2.825545 4.479144 2.752424 0.8040356 1.036889 1.425736 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32758_c0_g1_i1 4.693325634 9.386651269 0 0 #NAME? 0.001787977 0.008726926 Down 1.368226 2.981451 0.7887498 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32763_c0_g1_i1 10.66960895 0.246039046 21.09317886 85.73102209 6.421745438 4.89E-07 4.91E-06 Up 0 0 0.08286536 1.474372 1.383785 1.009261 AAX43790.1 "DEAD box polypeptide 17, partial [synthetic construct]" Q5B0J9|DBP2_EMENI ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp2 PE=3 SV=1 ppa:PAS_chr4_0201 K12823 "DDX5, DBP2" ATP-dependent RNA helicase DDX5/DBP2 ko03040 Spliceosome KOG0331 ATP-dependent RNA helicase [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification L COG0513 purine NTP-dependent helicase activity "Biological Process: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: helicase activity (GO:0004386);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: rRNA processing (GO:0006364);" "PF00271.30,PF00270.28" Helicase conserved C-terminal domain|DEAD/DEAH box helicase TRINITY_DN32764_c0_g1_i1 22.72570443 11.1147221 34.33668677 3.089297821 1.627278959 0.004636408 0.01987914 Up 1.598571 0 1.805292 1.997633 2.82048 3.658583 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32766_c0_g1_i1 5.359410599 10.7188212 0 0 #NAME? 0.000602166 0.003328966 Down 2.223385 1.774275 2.075059 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32771_c0_g1_i1 3.631821719 6.896134254 0.367509184 0.053292058 -4.229935651 0.033800629 0.103915473 Down 1.704107 1.076041 0.2372716 0.1538466 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32773_c0_g1_i1 8.156752761 15.58903505 0.724470471 0.04647308 -4.427460931 0.000306908 0.001827318 Down 1.519982 1.888646 1.860546 0 0.2235463 0 SJX28906.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" O43105|RS7_NEUCR 40S ribosomal protein S7 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=crp-15 PE=3 SV=2 psq:PUNSTDRAFT_100026 K02993 "RP-S7e, RPS7" small subunit ribosomal protein S7e ko03010 Ribosome KOG3320 40S ribosomal protein S7 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J ENOG410ZYKB ribosomal protein S7 Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: rRNA processing (GO:0006364);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Cellular Component: small-subunit processome (GO:0032040);|Biological Process: ribosomal small subunit biogenesis (GO:0042274); PF01251.17 Ribosomal protein S7e TRINITY_DN32776_c0_g1_i1 3.781000184 7.562000367 0 0 #NAME? 0.006022185 0.024831051 Down 1.127083 1.08495 1.034916 0 0 0 AAX29227.1 "lactate dehydrogenase B, partial [synthetic construct]" P22989|LDHB_HORVU L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1 ppp:PHYPADRAFT_195311 K00016 "LDH, ldh" L-lactate dehydrogenase ko00640|ko00620|ko00270|ko00010 Propanoate metabolism|Pyruvate metabolism|Cysteine and methionine metabolism|Glycolysis / Gluconeogenesis KOG1495 Lactate dehydrogenase [C] METABOLISM Energy production and conversion C COG0039 Catalyzes the reversible oxidation of malate to oxaloacetate (By similarity) Molecular Function: L-lactate dehydrogenase activity (GO:0004459);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: carboxylic acid metabolic process (GO:0019752); PF00056.22 "lactate/malate dehydrogenase, NAD binding domain" TRINITY_DN32777_c0_g1_i1 52.79165026 0 105.5833005 Inf Inf 6.27E-37 4.51E-35 Up 0 0 0 8.520591 8.922091 6.976783 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32790_c0_g1_i1 2.408842555 4.817685109 0 0 #NAME? 0.042426381 0.124377468 Down 0.6459792 1.235982 1.246533 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32791_c0_g1_i1 30.71526194 47.92109117 13.5094327 0.281909956 -1.826693665 0.016406362 0.057481785 Down 2.569032 6.979002 9.19465 1.434017 0.7278979 2.135375 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32797_c0_g1_i1 27.38432743 54.76865487 0 0 #NAME? 8.34E-18 2.37E-16 Down 6.096898 6.999375 7.186026 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32798_c0_g1_i1 7.375251008 14.75050202 0 0 #NAME? 3.48E-05 0.000254372 Down 2.972276 3.632888 2.339208 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32801_c0_g1_i1 5.731683433 0.738117137 10.72524973 14.53055239 3.861017644 0.006080009 0.025034582 Up 0 0 0.2560326 1.575207 0.8686605 0.7254859 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32803_c0_g1_i1 9.682136273 19.36427255 0 0 #NAME? 1.21E-06 1.15E-05 Down 3.957788 2.376416 2.709699 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32805_c0_g1_i1 13.52686629 27.05373258 0 0 #NAME? 4.44E-09 5.85E-08 Down 4.378745 2.599776 3.525848 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32806_c0_g1_i1 10.35630472 20.71260944 0 0 #NAME? 3.76E-07 3.84E-06 Down 1.320259 2.558495 2.556152 0 0 0 AAX43024.1 "ribosomal protein L15, partial [synthetic construct]" Q8X034|RL15_NEUCR 60S ribosomal protein L15 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=rpl-15 PE=3 SV=1 ure:UREG_06589 K02877 "RP-L15e, RPL15" large subunit ribosomal protein L15e ko03010 Ribosome KOG1678 60s ribosomal protein L15 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1632 Ribosomal protein L15 Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF00827.16 Ribosomal L15 TRINITY_DN32807_c0_g1_i1 16.78330621 33.56661242 0 0 #NAME? 8.66E-09 1.10E-07 Down 2.511344 6.424968 4.187395 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3280_c0_g1_i1 5.53707822 11.07415644 0 0 #NAME? 0.001009821 0.005267013 Down 2.655709 0.6344538 3.603875 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32814_c0_g1_i1 10.17787511 20.35575022 0 0 #NAME? 5.18E-07 5.19E-06 Down 4.588019 2.963049 4.691271 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32820_c0_g1_i1 20.36675917 38.47362575 2.259892593 0.058738748 -4.089543684 1.62E-08 2.00E-07 Down 3.558536 2.624455 2.217213 0.2187376 0 0.2180683 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3282_c0_g1_i1 26.55524976 40.46122269 12.64927683 0.312627152 -1.67748501 0.001231631 0.006284442 Down 5.246307 5.095125 4.851532 2.516639 0.247973 1.033732 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32834_c0_g1_i1 26.33291486 2.186186536 50.47964318 23.09027265 4.529213303 7.40E-13 1.45E-11 Up 0.2571765 0.06128485 0.04711306 1.523888 2.559294 2.116099 AOQ03997.1 "Ald-RE, partial [synthetic construct]" F4KGQ0|ALFC4_ARATH "Fructose-bisphosphate aldolase 4, cytosolic OS=Arabidopsis thaliana OX=3702 GN=FBA4 PE=2 SV=1" eus:EUTSA_v10013921mg K01623 ALDO "fructose-bisphosphate aldolase, class I" ko00710|ko00030|ko00051|ko00010 Carbon fixation in photosynthetic organisms|Pentose phosphate pathway|Fructose and mannose metabolism|Glycolysis / Gluconeogenesis KOG1557 Fructose-biphosphate aldolase [G] METABOLISM Carbohydrate transport and metabolism G COG3588 fructose-bisphosphate aldolase Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332);|Cellular Component: cytosol (GO:0005829);|Biological Process: gluconeogenesis (GO:0006094);|Biological Process: glycolytic process (GO:0006096); PF00274.18 Fructose-bisphosphate aldolase class-I TRINITY_DN32835_c0_g1_i1 47.59433976 22.14827806 73.04040146 3.297791425 1.721500156 1.02E-05 8.24E-05 Up 0.5633547 1.533187 1.622978 3.150466 3.678483 3.017896 EYU43296.1 hypothetical protein MIMGU_mgv1a018028mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03478.17 Protein of unknown function (DUF295) TRINITY_DN32838_c0_g1_i1 36.06420523 72.12841046 0 0 #NAME? 2.10E-15 5.00E-14 Down 15.11652 15.28478 7.752875 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32840_c0_g1_i1 2.538623021 5.077246042 0 0 #NAME? 0.034849854 0.106434732 Down 0.4956712 0.5931494 0.8570787 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32841_c0_g1_i1 27.39186778 54.78373556 0 0 #NAME? 8.28E-18 2.36E-16 Down 3.096344 2.791452 3.278039 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32842_c0_g1_i1 5.39918319 0 10.79836638 Inf Inf 0.000259561 0.001572018 Up 0 0 0 1.131386 0.8292169 1.181295 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- Z COG5022 myosin heavy chain -- "PF01576.18,PF00769.18,PF04582.11" Myosin tail|Ezrin/radixin/moesin family|Reovirus sigma C capsid protein TRINITY_DN32843_c0_g1_i1 5.34164338 0.651223126 10.03206363 15.40495605 3.945322662 0.004653698 0.019943856 Up 0.3831917 0 0 2.150473 1.251655 1.473851 AOQ11416.1 kdn-RB [synthetic construct] P79024|CISY_CANTR "Citrate synthase, mitochondrial OS=Candida tropicalis OX=5482 GN=CIT PE=3 SV=1" cten:CANTEDRAFT_128012 K01647 "CS, gltA" citrate synthase ko00020|ko00630 Citrate cycle (TCA cycle)|Glyoxylate and dicarboxylate metabolism KOG2617 Citrate synthase [C] METABOLISM Energy production and conversion S COG5209 cell differentiation protein Rcd1 Molecular Function: citrate (Si)-synthase activity (GO:0004108);|Cellular Component: mitochondrial matrix (GO:0005759);|Biological Process: tricarboxylic acid cycle (GO:0006099); PF00285.20 "Citrate synthase, C-terminal domain" TRINITY_DN32848_c0_g1_i1 6.39579307 1.428347119 11.36323902 7.955516462 2.991955592 0.011185507 0.041758676 Up 0 0.3128331 0.1203636 1.048327 1.313404 0.2878913 ACL90053.1 CG3731-PA [synthetic construct] Q9Y8B5|MPPB_LENED Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes OX=5353 GN=mppB PE=3 SV=1 abp:AGABI1DRAFT132073 K17732 "PMPCB, MAS1" mitochondrial-processing peptidase subunit beta -- -- KOG0960 "Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily)" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0612 peptidase' Molecular Function: metalloendopeptidase activity (GO:0004222);|Biological Process: protein processing involved in protein targeting to mitochondrion (GO:0006627);|Cellular Component: mitochondrial processing peptidase complex (GO:0017087);|Molecular Function: metal ion binding (GO:0046872); PF05193.20 Peptidase M16 inactive domain TRINITY_DN32849_c0_g1_i1 7.24814635 0 14.4962927 Inf Inf 0.000351058 0.002061522 Up 0 0 0 0.3816399 2.458691 1.98343 ABS44863.1 putative ribosomal protein S14 [Oryza sativa Japonica Group] P46295|RS14_CHLRE 40S ribosomal protein S14 OS=Chlamydomonas reinhardtii OX=3055 GN=RPS14 PE=3 SV=1 fme:FOMMEDRAFT_101216 K02955 "RP-S14e, RPS14" small subunit ribosomal protein S14e ko03010 Ribosome KOG0407 40S ribosomal protein S14 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0100 "Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF00411.18 Ribosomal protein S11 TRINITY_DN32851_c0_g1_i1 2.40304357 0 4.806087139 Inf Inf 0.030952505 0.096665089 Up 0 0 0 0.9040377 0.9057938 0.6595965 AOQ12843.1 Prm-PA [synthetic construct] -- -- -- -- -- -- -- -- KOG0161 Myosin class II heavy chain [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5022 myosin heavy chain -- PF01576.18 Myosin tail TRINITY_DN32855_c0_g1_i1 13.20294682 5.023596198 21.38229744 4.256372646 2.089624465 0.003471074 0.015485253 Up 1.475393 0.2876689 0.2266917 2.848684 2.328036 1.131894 PHT29339.1 hypothetical protein CQW23_31065 [Capsicum baccatum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32856_c0_g1_i1 8.181397872 16.36279574 0 0 #NAME? 0.012463203 0.045727626 Down 4.463434 2.388281 0 0 0 0 KHN10708.1 "Photosystem II reaction center W protein, chloroplastic [Glycine soja]" Q39194|PSBW_ARATH "Photosystem II reaction center W protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBW PE=1 SV=2" gmx:100526966 K02721 psbW photosystem II PsbW protein ko00195 Photosynthesis -- -- -- -- -- S ENOG410XZ0Y photosystem ii reaction center w Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: photosystem II stabilization (GO:0042549); PF07123.11 Photosystem II reaction centre W protein (PsbW) TRINITY_DN32859_c0_g1_i1 31.74141838 63.48283675 0 0 #NAME? 1.49E-20 5.05E-19 Down 6.773873 6.340518 7.693125 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32860_c0_g1_i1 8.83882447 13.98182062 3.695828322 0.264330978 -1.919582583 0.037340247 0.112322253 Down 0.7033307 1.702796 2.012149 0.4786618 0.3126981 0.1730114 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32861_c0_g1_i1 47.94787184 95.89574367 0 0 #NAME? 1.36E-30 7.81E-29 Down 7.234142 7.972794 8.453314 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32863_c0_g1_i1 6.650655759 13.30131152 0 0 #NAME? 0.000108571 0.000714465 Down 2.903409 2.810026 1.310963 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32866_c0_g1_i1 7.082850578 0 14.16570116 Inf Inf 1.76E-05 0.00013671 Up 0 0 0 0.8008593 1.16958 1.358409 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32867_c0_g1_i1 6.594964429 12.46545839 0.724470471 0.058118237 -4.104865238 0.002351707 0.011065726 Down 2.864559 2.199022 1.743157 0 0.27377 0 AAX32225.1 ribosomal protein L34 [synthetic construct] O42846|RL34A_SCHPO 60S ribosomal protein L34-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl3401 PE=3 SV=1 nte:NEUTE1DRAFT94702 K02915 "RP-L34e, RPL34" large subunit ribosomal protein L34e ko03010 Ribosome KOG1790 60s ribosomal protein L34 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2174 (ribosomal) protein Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Biological Process: ribosome biogenesis (GO:0042254); PF01199.17 Ribosomal protein L34e TRINITY_DN32868_c0_g1_i1 3.136538001 6.273076002 0 0 #NAME? 0.014790567 0.052790391 Down 0.609896 0.8846872 0.937775 0 0 0 XP_020273363.1 uncharacterized protein LOC109848329 [Asparagus officinalis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32869_c0_g1_i1 5.817474542 10.89993071 0.735018369 0.067433306 -3.89039485 0.004616305 0.019802299 Down 0.722005 1.398124 2.747273 0.251529 0 0 PIN00557.1 hypothetical protein CDL12_26938 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32872_c0_g1_i1 8.50115074 17.00230148 0 0 #NAME? 1.76E-05 0.000136153 Down 1.110424 3.585198 2.31409 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32873_c0_g1_i1 5.842133813 10.59756192 1.086705707 0.102542992 -3.285699197 0.014966344 0.053252637 Down 1.944818 1.486354 0.8334053 0 0.4094058 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32875_c0_g1_i1 5.168322375 0 10.33664475 Inf Inf 0.000361057 0.002112933 Up 0 0 0 1.707217 2.024953 1.136387 KZV14935.1 hypothetical protein F511_33913 [Dorcoceras hygrometricum] Q43207|FKB70_WHEAT 70 kDa peptidyl-prolyl isomerase OS=Triticum aestivum OX=4565 GN=FKBP70 PE=1 SV=1 -- -- -- -- -- -- KOG0543 FKBP-type peptidyl-prolyl cis-trans isomerase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0545 Peptidyl-prolyl cis-trans isomerase Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);|Molecular Function: calmodulin binding (GO:0005516); -- -- TRINITY_DN32877_c0_g1_i1 3.834868879 7.669737759 0 0 #NAME? 0.004875572 0.020752785 Down 0.6523563 1.250194 2.228414 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32879_c0_g1_i1 19.75521652 39.51043304 0 0 #NAME? 0.001013605 0.005284924 Down 4.579317 4.695121 0 0 0 0 KRH56852.1 hypothetical protein GLYMA_05G022900 [Glycine max] Q9SHE8|PSAF_ARATH "Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAF PE=1 SV=1" gmx:100807732 K02694 psaF photosystem I subunit III ko00195 Photosynthesis -- -- -- -- -- S ENOG4111JQH photosystem i Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: photosystem I reaction center (GO:0009538);|Cellular Component: thylakoid (GO:0009579);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: plastoglobule (GO:0010287);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: protein domain specific binding (GO:0019904); PF02507.14 Photosystem I reaction centre subunit III TRINITY_DN32884_c0_g1_i1 17.02734477 28.85754011 5.197149435 0.180096759 -2.473155879 0.000370374 0.002160418 Down 5.174859 4.195887 3.093426 0.7425341 0.449966 0.4838539 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32886_c0_g1_i1 11.64730874 5.359612039 17.93500545 3.346325315 1.742577705 0.020412914 0.068892448 Up 0.8409703 2.500756 0.02473097 3.358021 1.724341 3.595969 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32887_c0_g1_i1 8.444199259 16.88839852 0 0 #NAME? 1.53E-05 0.0001197 Down 1.892646 0.5148087 1.672577 0 0 0 XP_019161003.1 PREDICTED: uncharacterized protein LOC109157605 [Ipomoea nil] -- -- -- -- -- -- -- -- KOG0987 DNA helicase PIF1/RRM3 [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " L COG0507 exodeoxyribonuclease v alpha -- PF05970.13 PIF1-like helicase TRINITY_DN32890_c0_g1_i1 5.83120586 11.66241172 0 0 #NAME? 0.000285276 0.001710865 Down 0.9165624 1.258509 1.477693 0 0 0 ABM86791.1 "peptidylprolyl isomerase A (cyclophilin A), partial [synthetic construct]" Q39613|CYPH_CATRO Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus OX=4058 GN=PCKR1 PE=1 SV=1 pop:POPTR_0002s02310g K01802 E5.2.1.8 peptidylprolyl isomerase -- -- KOG0865 Cyclophilin type peptidyl-prolyl cis-trans isomerase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0652 peptidyl-prolyl cis-trans isomerase activity Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein folding (GO:0006457); PF00160.20 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TRINITY_DN32895_c0_g1_i1 38.17780472 70.03519597 6.320413466 0.090246245 -3.469989282 1.53E-12 2.93E-11 Down 2.268967 1.96075 2.372712 0.1084548 0.1870448 0.1816811 XP_022895272.1 uncharacterized protein LOC111409458 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111MDI ZnF_PMZ -- "PF10551.8,PF04434.16" MULE transposase domain|SWIM zinc finger TRINITY_DN32896_c0_g1_i1 97.4227109 131.4342238 63.41119803 0.482455758 -1.051531444 5.55E-05 0.000389442 Down 14.34766 14.28618 15.27951 4.696301 5.302854 7.029146 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32904_c0_g1_i1 6.037878939 12.07575788 0 0 #NAME? 0.009640577 0.036948218 Down 1.942848 2.589704 0 0 0 0 ACU20043.1 unknown [Glycine max] Q9ATM4|PIP27_MAIZE Aquaporin PIP2-7 OS=Zea mays OX=4577 GN=PIP2-7 PE=2 SV=1 gmx:100811119 K09872 PIP aquaporin PIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Cellular Component: vacuole (GO:0005773);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to water deprivation (GO:0009414);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: water channel activity (GO:0015250);|Cellular Component: integral component of membrane (GO:0016021); PF00230.19 Major intrinsic protein TRINITY_DN32907_c0_g1_i1 26.03246012 49.88096094 2.183959311 0.043783425 -4.513471376 4.11E-08 4.78E-07 Down 3.051537 5.452168 6.988139 0.1731281 0.3429364 1.54E-44 CAN62533.1 hypothetical protein VITISV_030700 [Vitis vinifera] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN32908_c0_g1_i1 4.026259827 8.052519654 0 0 #NAME? 0.004109644 0.017913294 Down 0.5520214 2.709232 1.697198 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32910_c0_g1_i1 12.44285476 24.88570952 0 0 #NAME? 2.23E-08 2.69E-07 Down 3.371136 2.625712 2.640862 0 0 0 BAG73670.1 "ribosomal protein L11, partial [synthetic construct]" P0CT78|RL11B_SCHPO 60S ribosomal protein L11-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl1102 PE=2 SV=1 hir:HETIRDRAFT_477978 K02868 "RP-L11e, RPL11" large subunit ribosomal protein L11e ko03010 Ribosome KOG0397 60S ribosomal protein L11 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0094 "This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits" Biological Process: ribosomal large subunit assembly (GO:0000027);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Biological Process: ribosome biogenesis (GO:0042254); "PF00281.18,PF00673.20" Ribosomal protein L5|ribosomal L5P family C-terminus TRINITY_DN32913_c0_g1_i1 18.3970689 34.98296163 1.811176178 0.051773094 -4.271653639 0.017886976 0.061758842 Down 1.602276 13.95712 5.725996 0 0.8193868 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32918_c0_g1_i1 6.102972309 10.39476844 1.811176178 0.174239204 -2.520858828 0.03819345 0.114323459 Down 3.202553 0.7912666 2.466136 0 0.9843794 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32921_c0_g1_i1 57.29059046 101.6224083 12.95877258 0.127518849 -2.971217579 1.41E-14 3.14E-13 Down 23.10555 18.17517 18.00695 2.20816 2.236151 1.59399 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32932_c0_g1_i1 9.422829131 18.11591384 0.72974442 0.040281955 -4.633722499 6.55E-05 0.000451818 Down 2.890578 1.263396 2.00155 0.1439461 0.1465636 0 XP_024437608.1 uncharacterized protein LOC112323486 [Populus trichocarpa] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN32936_c0_g1_i1 5.985785967 10.52263099 1.448940942 0.137697591 -2.860424771 0.028160102 0.089571265 Down 2.569575 3.358146 0.6637328 0 0.7667264 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32937_c0_g1_i1 6.449651297 0.738117137 12.16118546 16.47595598 4.042290272 0.002416065 0.011330968 Up 0 0 0.2791899 1.971098 1.234323 0.5753514 XP_011096132.1 trans-alpha-bergamotene synthase-like [Sesamum indicum] J7LQ09|TPS7_PHYDL Trans-alpha-bergamotene synthase OS=Phyla dulcis OX=542674 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YF98 synthase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate catabolic process (GO:0045339);|Biological Process: (-)-exo-alpha-bergamotene biosynthetic process (GO:1901940); -- -- TRINITY_DN32942_c0_g1_i1 2.432786132 4.865572264 0 0 #NAME? 0.038310135 0.114563149 Down 0.4239365 0.409436 1.193343 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32945_c0_g1_i1 18.85824714 8.444619551 29.27187472 3.466334338 1.793410813 0.00209309 0.01001704 Up 0.8805646 0.454456 0.1327832 1.305085 1.558653 1.179199 KZV37330.1 11-beta-hydroxysteroid dehydrogenase-like 5 [Dorcoceras hygrometricum] Q9T0G0|HSD5_ARATH 11-beta-hydroxysteroid dehydrogenase-like 5 OS=Arabidopsis thaliana OX=3702 GN=HSD5 PE=2 SV=1 -- -- -- -- -- -- KOG1205 Predicted dehydrogenase [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " S COG1028 Dehydrogenase reductase Biological Process: steroid biosynthetic process (GO:0006694);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity (GO:0016491); "PF00106.24,PF13561.5,PF08659.9" short chain dehydrogenase|Enoyl-(Acyl carrier protein) reductase|KR domain TRINITY_DN32952_c0_g1_i1 10.39154143 16.3209518 4.462131066 0.273398949 -1.870920398 0.026112001 0.084159475 Down 1.766552 3.455019 4.091663 0.673171 0.6732194 0.7341118 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32956_c0_g1_i1 17.73039637 1.222873734 34.23791901 27.99791838 4.807247663 2.04E-09 2.80E-08 Up 0.2566096 0 0.09651814 3.501558 2.06525 2.902536 ACL86386.1 "RpL15-PA, partial [synthetic construct]" P05748|RL15A_YEAST 60S ribosomal protein L15-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL15A PE=1 SV=3 gtr:GLOTRDRAFT_137636 K02877 "RP-L15e, RPL15" large subunit ribosomal protein L15e ko03010 Ribosome KOG1678 60s ribosomal protein L15 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1632 Ribosomal protein L15 Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF00827.16 Ribosomal L15 TRINITY_DN32957_c0_g1_i1 3.040562252 6.081124504 0 0 #NAME? 0.017488705 0.060535671 Down 1.485831 0.4792815 1.124826 0 0 0 XP_023914282.1 uncharacterized protein LOC112025828 [Quercus suber] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN32959_c0_g1_i1 4.737552042 9.475104084 0 0 #NAME? 0.001578532 0.0078199 Down 1.699032 1.654039 1.144522 0 0 0 ABM83335.1 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30 [synthetic construct] P49689|RS30_ARATH 40S ribosomal protein S30 OS=Arabidopsis thaliana OX=3702 GN=RPS30A PE=3 SV=3 vcn:VOLCADRAFT_78308 K02983 "RP-S30e, RPS30" small subunit ribosomal protein S30e ko03010 Ribosome KOG0001 Ubiquitin and ubiquitin-like proteins [OR] CELLULAR PROCESSES AND SIGNALING|POORLY CHARACTERIZED "Posttranslational modification, protein turnover, chaperones |General function prediction only " J ENOG41123KC 40s ribosomal protein s30 Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); "PF04758.13,PF00240.22" Ribosomal protein S30|Ubiquitin family TRINITY_DN32962_c0_g1_i1 7.216885376 14.43377075 0 0 #NAME? 3.99E-05 0.000288239 Down 2.612025 2.096219 2.676126 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32963_c0_g1_i1 5.144948922 0 10.28989784 Inf Inf 0.009922131 0.037813389 Up 0 0 0 3.29076 1.12928 0.4098836 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32974_c0_g1_i1 34.69042762 69.38085523 0 0 #NAME? 2.26E-22 8.49E-21 Down 10.33087 12.51635 12.64561 0 0 0 SJX42570.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4110Q0X NA -- -- -- TRINITY_DN32977_c0_g1_i1 4.489299897 8.2070231 0.771576693 0.094014198 -3.410977543 0.025364959 0.082182442 Down 0.9089524 1.348581 1.613689 0 0 0.2431643 XP_024160115.1 uncharacterized protein LOC112167333 [Rosa chinensis] P93295|M310_ARATH Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN32979_c0_g1_i1 14.92493938 4.898816431 24.95106232 5.093283791 2.348596105 0.00106826 0.005538725 Up 1.188652 0 0.8025626 2.537539 2.375672 3.063965 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32980_c0_g1_i1 11.9721806 23.9443612 0 0 #NAME? 3.37E-08 3.98E-07 Down 1.308467 1.558516 2.268703 0 0 0 PIN22815.1 [histone H3]-lysine-36 demethylase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41104I0 jumonji domain protein -- -- -- TRINITY_DN32981_c0_g1_i1 3.570867798 7.141735596 0 0 #NAME? 0.031344972 0.097715976 Down 0 2.831062 1.48534 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32983_c0_g1_i1 6.727151661 11.64312714 1.811176178 0.155557537 -2.684479801 0.02151848 0.071827957 Down 1.87531 0.8983967 1.393857 0 0.5274947 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32989_c0_g1_i1 4.473910071 8.947820141 0 0 #NAME? 0.022411313 0.074327225 Down 0.7817897 0.7727906 3.714006 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN32991_c0_g1_i1 13.65354656 27.30709312 0 0 #NAME? 3.37E-09 4.51E-08 Down 2.295634 1.436777 2.272573 0 0 0 ABM82348.1 "guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 [synthetic construct]" Q01369|GBLP_NEUCR Guanine nucleotide-binding protein subunit beta-like protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cpc-2 PE=3 SV=1 -- -- -- -- -- -- KOG0279 G protein beta subunit-like protein [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410XQGZ guanine nucleotidebinding protein Biological Process: positive regulation of protein phosphorylation (GO:0001934);|Molecular Function: protein kinase C binding (GO:0005080);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Molecular Function: enzyme binding (GO:0019899);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Molecular Function: ribosome binding (GO:0043022);|Biological Process: rescue of stalled ribosome (GO:0072344); PF00400.31 "WD domain, G-beta repeat" TRINITY_DN32999_c0_g1_i1 20.64296093 10.76246964 30.52345221 2.836101119 1.503908972 0.007896767 0.031257233 Up 0.5188961 1.04621 0.3887984 1.407741 1.439675 1.680339 XP_011075344.1 zeatin O-glucosyltransferase-like [Sesamum indicum] Q9ZSK5|ZOG_PHALU Zeatin O-glucosyltransferase OS=Phaseolus lunatus OX=3884 GN=ZOG1 PE=2 SV=1 sind:105159840 K13495 CISZOG cis-zeatin O-glucosyltransferase ko00908 Zeatin biosynthesis KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Biological Process: protein glycosylation (GO:0006486);|Biological Process: cytokinin metabolic process (GO:0009690);|Biological Process: leaf morphogenesis (GO:0009965);|Biological Process: root morphogenesis (GO:0010015);|Biological Process: regulation of vegetative meristem growth (GO:0010083);|Biological Process: regulation of chlorophyll biosynthetic process (GO:0010380);|Biological Process: negative regulation of growth (GO:0045926);|Biological Process: seed development (GO:0048316);|Biological Process: flower morphogenesis (GO:0048439);|Molecular Function: trans-zeatin O-beta-D-glucosyltransferase activity (GO:0050403);|Molecular Function: zeatin O-beta-D-xylosyltransferase activity (GO:0050404); PF00201.17 UDP-glucoronosyl and UDP-glucosyl transferase TRINITY_DN329_c0_g1_i1 7.383553344 14.76710669 0 0 #NAME? 0.001195777 0.006114668 Down 1.614574 4.443468 1.255978 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33005_c0_g1_i1 4.03002118 0.246039046 7.814003315 31.75920023 4.989102678 0.009588412 0.036782456 Up 0 0 0.1127681 0.850914 0.572962 0.7615306 ACL91826.1 CG11015-PA [synthetic construct] P04037|COX4_YEAST "Cytochrome c oxidase subunit 4, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=COX4 PE=1 SV=1" abv:AGABI2DRAFT184110 K02265 COX5B cytochrome c oxidase subunit 5b ko00190 Oxidative phosphorylation KOG3352 "Cytochrome c oxidase, subunit Vb/COX4" [C] METABOLISM Energy production and conversion O ENOG4111XEM cytochrome C oxidase "Molecular Function: cytochrome-c oxidase activity (GO:0004129);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Cellular Component: mitochondrial respiratory chain complex IV (GO:0005751);|Cellular Component: mitochondrial intermembrane space (GO:0005758);|Biological Process: mitochondrial electron transport, cytochrome c to oxygen (GO:0006123);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: aerobic respiration (GO:0009060);|Biological Process: mitochondrial respiratory chain complex IV assembly (GO:0033617);|Biological Process: mitochondrial ATP synthesis coupled proton transport (GO:0042776);" PF01215.18 Cytochrome c oxidase subunit Vb TRINITY_DN33013_c0_g1_i1 20.35487643 33.57593042 7.133822433 0.212468347 -2.234680167 0.000266102 0.001608101 Down 4.716012 5.214204 4.364588 0.3951433 0.8019506 1.309467 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33015_c0_g1_i1 10.11483084 4.651218581 15.57844309 3.34932509 1.743870413 0.040399891 0.119579569 Up 0.7149404 1.036921 0.8271275 3.222773 1.822871 1.966448 XP_012840019.1 PREDICTED: putative sodium-coupled neutral amino acid transporter 7 [Erythranthe guttata] Q9LYM2|AVT6C_ARATH Amino acid transporter AVT6C OS=Arabidopsis thaliana OX=3702 GN=AVT6C PE=2 SV=1 -- -- -- -- -- -- KOG1305 Amino acid transporter protein [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Cellular Component: integral component of membrane (GO:0016021); "PF01490.17,PF03222.12" Transmembrane amino acid transporter protein|Tryptophan/tyrosine permease family TRINITY_DN33020_c0_g1_i1 12.28829121 5.953664833 18.62291759 3.127975476 1.645229202 0.028865386 0.09138873 Up 0.6016828 0.4377259 0.3426042 1.405867 0.7707363 1.215404 XP_011100204.1 14-3-3 protein 9 [Sesamum indicum] Q96453|1433D_SOYBN 14-3-3-like protein D OS=Glycine max OX=3847 GN=GF14D PE=2 SV=1 -- -- -- -- -- -- KOG0841 Multifunctional chaperone (14-3-3 family) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " T COG5040 Tyrosine 3-monooxygenase tryptophan 5-monooxygenase activation protein Molecular Function: protein domain specific binding (GO:0019904); PF00244.19 14-3-3 protein TRINITY_DN33023_c0_g1_i1 4.484191503 8.968383005 0 0 #NAME? 0.020527119 0.069216129 Down 3.307958 2.17916 0 0 0 0 KHN35842.1 Beta-galactosidase [Glycine soja] P48981|BGAL_MALDO Beta-galactosidase OS=Malus domestica OX=3750 PE=1 SV=1 -- -- -- -- -- -- KOG0496 Beta-galactosidase [G] METABOLISM Carbohydrate transport and metabolism G COG1874 beta-galactosidase Molecular Function: beta-galactosidase activity (GO:0004565);|Biological Process: carbohydrate metabolic process (GO:0005975);|Cellular Component: apoplast (GO:0048046); -- -- TRINITY_DN33024_c0_g1_i1 26.83077864 53.66155727 0 0 #NAME? 0.000696727 0.003789875 Down 12.96568 10.50278 0 0 0 0 KRH10597.1 hypothetical protein GLYMA_15G057600 [Glycine max] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33026_c0_g1_i1 6.369549475 1.722273319 11.01682563 6.396676711 2.677322571 0.029939432 0.094077296 Up 0 0 0.4952695 1.307928 1.035793 0.2770619 PIN02867.1 "26S proteasome regulatory complex, subunit RPN3/PSMD3 [Handroanthus impetiginosus]" Q06364|PSMD3_DAUCA Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Daucus carota OX=4039 GN=21D7 PE=1 SV=2 sind:105173023 K03033 "PSMD3, RPN3" 26S proteasome regulatory subunit N3 ko03050 Proteasome KOG2581 "26S proteasome regulatory complex, subunit RPN3/PSMD3" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410XS40 26S proteasome nonATPase regulatory subunit Cellular Component: proteasome complex (GO:0000502);|Cellular Component: nucleus (GO:0005634);|Molecular Function: enzyme regulator activity (GO:0030234);|Biological Process: regulation of protein catabolic process (GO:0042176); -- -- TRINITY_DN33031_c0_g1_i1 7.261111784 14.52222357 0 0 #NAME? 3.54E-05 0.000258378 Down 1.667597 0.58976 1.636096 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33032_c0_g1_i1 5.322724537 10.64544907 0 0 #NAME? 0.000676526 0.003691936 Down 2.458967 1.437436 1.552062 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33037_c0_g1_i1 7.024154476 14.04830895 0 0 #NAME? 5.59E-05 0.000391722 Down 2.358864 1.384965 1.681064 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3303_c0_g1_i1 35.88640035 54.48669175 17.28610894 0.31725378 -1.65629074 0.000164856 0.001043262 Down 6.756782 9.584305 7.999104 1.449654 1.456406 3.406463 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33040_c0_g1_i1 3.055625532 6.111251063 0 0 #NAME? 0.018832459 0.064508134 Down 0.9571117 2.210178 0.5091514 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33041_c0_g1_i1 13.93459002 27.86918004 0 0 #NAME? 6.06E-05 0.000420907 Down 9.583848 3.490344 3.283918 0 0 0 XP_015575166.1 uncharacterized protein LOC107261307 [Ricinus communis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN33044_c0_g1_i1 4.670634754 0.325611563 9.015657944 27.68838387 4.791208943 0.004123722 0.01796431 Up 0.1613658 0 0 0.298746 0.8934943 1.634908 ACL91396.1 Mp20-PA [synthetic construct] Q08873|SCP1_YEAST Transgelin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SCP1 PE=1 SV=1 nce:NCER_101203 K20526 TAGLN transgelin -- -- KOG2046 Calponin [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5199 Calponin "Biological Process: chronological cell aging (GO:0001300);|Biological Process: actin filament organization (GO:0007015);|Cellular Component: actin cortical patch (GO:0030479);|Molecular Function: protein binding, bridging (GO:0030674);|Molecular Function: actin filament binding (GO:0051015);" PF00307.30 Calponin homology (CH) domain TRINITY_DN33047_c0_g1_i1 9.760585757 18.07223057 1.448940942 0.080174992 -3.640703885 0.000400136 0.002317052 Down 1.783695 3.456501 2.205601 0 0.4221616 0 AIC49644.1 "RPS13, partial [synthetic construct]" P33192|RS13_CANMA 40S ribosomal protein S13 OS=Candida maltosa OX=5479 GN=RPS13 PE=3 SV=2 sla:SERLADRAFT_458466 K02953 "RP-S13e, RPS13" small subunit ribosomal protein S13e ko03010 Ribosome KOG0400 40S ribosomal protein S13 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0184 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); "PF08069.11,PF00312.21" Ribosomal S13/S15 N-terminal domain|Ribosomal protein S15 TRINITY_DN33048_c0_g1_i1 17.25066594 8.825439762 25.67589211 2.909304556 1.540674331 0.014583579 0.052191139 Up 1.132523 0.4162812 0.6511285 2.335426 1.172726 1.770012 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33049_c0_g1_i1 6.526417928 10.73810578 2.31473008 0.215562235 -2.213823645 0.043415609 0.1266884 Down 0.774013 2.19897 2.041527 0 0 0.8598594 CDO99591.1 unnamed protein product [Coffea canephora] Q94FN2|MOR1_ARATH Protein MOR1 OS=Arabidopsis thaliana OX=3702 GN=MOR1 PE=1 SV=1 mus:103971536 K16803 "CKAP5, XMAP215" cytoskeleton-associated protein 5 -- -- KOG1820 Microtubule-associated protein [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton S ENOG410XPTW microtubule binding Cellular Component: kinetochore (GO:0000776);|Biological Process: cytokinesis by cell plate formation (GO:0000911);|Cellular Component: spindle pole (GO:0000922);|Cellular Component: centrosome (GO:0005813);|Cellular Component: spindle (GO:0005819);|Cellular Component: microtubule (GO:0005874);|Biological Process: spindle organization (GO:0007051);|Molecular Function: microtubule binding (GO:0008017);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: phragmoplast (GO:0009524);|Cellular Component: preprophase band (GO:0009574);|Biological Process: cell plate formation involved in plant-type cell wall biogenesis (GO:0009920);|Biological Process: establishment or maintenance of microtubule cytoskeleton polarity (GO:0030951);|Cellular Component: cortical microtubule cytoskeleton (GO:0030981);|Biological Process: microtubule polymerization (GO:0046785);|Molecular Function: microtubule plus-end binding (GO:0051010);|Biological Process: centrosome duplication (GO:0051298); -- -- TRINITY_DN33056_c0_g1_i1 16.9063125 0.651223126 33.16140188 50.92172033 5.670209255 2.98E-10 4.50E-09 Up 0.1755374 0 0 2.838713 2.175293 3.018242 ACL84897.1 "CG10664-PA, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG4075 "Cytochrome c oxidase, subunit IV/COX5b" [C] METABOLISM Energy production and conversion O ENOG4111T97 Cytochrome c oxidase subunit -- PF02936.13 Cytochrome c oxidase subunit IV TRINITY_DN33062_c0_g1_i1 3.771139044 7.542278087 0 0 #NAME? 0.005593404 0.023325807 Down 0.660726 1.943501 2.117337 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33072_c0_g1_i1 2.369056296 4.738112592 0 0 #NAME? 0.043941903 0.127862157 Down 0.2655342 1.041225 1.19747 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33074_c0_g1_i1 8.426802895 13.50946481 3.344140984 0.247540597 -2.014262946 0.037106065 0.111761371 Down 1.728601 1.963056 2.048197 0.8488167 0 0.297232 XP_017251133.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Daucus carota subsp. sativus] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN33076_c0_g1_i1 5.728725733 0 11.45745147 Inf Inf 0.000147422 0.000944386 Up 0 0 0 1.557983 1.568078 0.9344393 AOQ05882.1 "CG2016-RB, partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111H46 Haemolymph juvenile hormone binding protein (JHBP) -- PF06585.10 Haemolymph juvenile hormone binding protein (JHBP) TRINITY_DN33078_c0_g1_i1 13.09717808 26.19435617 0 0 #NAME? 9.81E-09 1.24E-07 Down 4.977294 2.88536 2.729389 0 0 0 ABM84375.1 ribosomal protein S16 [synthetic construct] P46293|RS16_GOSHI 40S ribosomal protein S16 OS=Gossypium hirsutum OX=3635 GN=RPS16 PE=2 SV=1 gra:105782152 K02960 "RP-S16e, RPS16" small subunit ribosomal protein S16e ko03010 Ribosome KOG1753 40S ribosomal protein S16 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0103 30S ribosomal protein S9 Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF00380.18 Ribosomal protein S9/S16 TRINITY_DN3307_c0_g1_i1 4.205864849 0.246039046 8.165690653 33.18859668 5.052615724 0.007401456 0.029590831 Up 0 0 0.06379936 0.5116158 0.7713413 0.5997882 -- -- -- -- -- -- -- -- -- -- KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " K COG1278 Cold shock protein -- -- -- TRINITY_DN33081_c0_g1_i1 8.575162008 17.15032402 0 0 #NAME? 0.006013501 0.024799752 Down 1.872574 2.61243 0 0 0 0 RDX67972.1 "Elongation factor 1-alpha, partial [Mucuna pruriens]" P25698|EF1A_SOYBN Elongation factor 1-alpha OS=Glycine max OX=3847 GN=TEFS1 PE=3 SV=2 gmx:100499630 K03231 EEF1A elongation factor 1-alpha ko03013 RNA transport KOG0052 Translation elongation factor EF-1 alpha/Tu [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG5256 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity) Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: translation (GO:0006412);|Biological Process: translational elongation (GO:0006414); "PF03143.16,PF03144.24" Elongation factor Tu C-terminal domain|Elongation factor Tu domain 2 TRINITY_DN33086_c0_g1_i1 3.44496693 6.889933861 0 0 #NAME? 0.010403358 0.039330358 Down 1.158275 1.372966 0.683967 0 0 0 AAX43897.1 "ribosomal protein S15, partial [synthetic construct]" Q945U1|RS15_ELAOL 40S ribosomal protein S15 OS=Elaeis oleifera OX=80265 GN=RPS15 PE=2 SV=1 mus:103991462 K02958 "RP-S15e, RPS15" small subunit ribosomal protein S15e ko03010 Ribosome KOG0898 40S ribosomal protein S15 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0185 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (By similarity) Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: small ribosomal subunit (GO:0015935); PF00203.20 Ribosomal protein S19 TRINITY_DN33089_c0_g1_i1 8.623049162 17.24609832 0 0 #NAME? 5.25E-05 0.000370372 Down 3.013692 3.395238 0.7725253 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33090_c0_g1_i1 7.116808357 1.230195228 13.00342149 10.57020966 3.401932088 0.004897487 0.020829957 Up 0 0 0.536845 2.0314 0.9326521 1.248548 EEF38867.1 conserved hypothetical protein [Ricinus communis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33098_c0_g1_i1 4.791526168 9.215543151 0.367509184 0.039879276 -4.648216989 0.007040642 0.028393379 Down 1.389777 1.5526 0.924792 0.1611462 0 0 EYU29613.1 hypothetical protein MIMGU_mgv1a004108mg [Erythranthe guttata] Q9SA85|BBE8_ARATH Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana OX=3702 GN=At1g30700 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- C COG0277 FAD linked oxidase domain protein Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: oxidoreductase activity (GO:0016491);|Molecular Function: FAD binding (GO:0071949); PF01565.22 FAD binding domain TRINITY_DN330_c0_g1_i1 23.00197038 46.00394075 0 0 #NAME? 5.70E-15 1.32E-13 Down 10.23486 7.399761 7.696963 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33101_c0_g1_i1 63.21109714 41.35540208 85.06679221 2.056969294 1.040520258 0.001354334 0.006827774 Up 2.707555 1.652662 2.392698 3.585499 3.820911 3.767909 XP_021769424.1 probable CCR4-associated factor 1 homolog 7 [Chenopodium quinoa] Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2 bvg:104883198 K12581 "CNOT7_8, CAF1, POP2" CCR4-NOT transcription complex subunit 7/8 ko03018 RNA degradation KOG0304 mRNA deadenylase subunit [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification K COG5228 "Ccr4-not transcription complex, subunit" Cellular Component: P-body (GO:0000932);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: poly(A)-specific ribonuclease activity (GO:0004535);|Cellular Component: nucleus (GO:0005634);|Biological Process: negative regulation of translation (GO:0017148);|Cellular Component: CCR4-NOT core complex (GO:0030015);|Biological Process: exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay (GO:0043928);|Molecular Function: metal ion binding (GO:0046872); PF04857.19 CAF1 family ribonuclease TRINITY_DN33106_c0_g1_i1 8.705768499 15.5427067 1.868830298 0.120238407 -3.056030292 0.003058008 0.013895112 Down 1.454346 1.151206 1.092742 0.1311542 0.06607384 0.1469532 KYP58323.1 Retrotransposable element Tf2 [Cajanus cajan] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN33108_c0_g1_i1 25.07364117 50.14728233 0 0 #NAME? 1.12E-10 1.78E-09 Down 7.489407 8.906857 3.595985 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33110_c0_g1_i1 8.891271541 17.78254308 0 0 #NAME? 3.39E-06 2.98E-05 Down 1.229355 1.40609 1.522064 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33112_c0_g1_i1 6.112982514 0.984156182 11.24180885 11.42278944 3.513843094 0.008396028 0.032923366 Up 0 0 0.3753288 1.571857 0.4491395 1.683398 ACL86571.1 "CG17737-PA, partial [synthetic construct]" P32911|SUI1_YEAST Eukaryotic translation initiation factor eIF-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SUI1 PE=1 SV=1 pco:PHACADRAFT_173745 K03113 "EIF1, SUI1" translation initiation factor 1 ko03013 RNA transport KOG1770 Translation initiation factor 1 (eIF-1/SUI1) [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0023 translation initiation factor Biological Process: formation of translation preinitiation complex (GO:0001731);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: translation initiation factor activity (GO:0003743);|Biological Process: regulation of translation (GO:0006417);|Cellular Component: eukaryotic 43S preinitiation complex (GO:0016282);|Molecular Function: translation initiation factor binding (GO:0031369);|Molecular Function: ribosomal small subunit binding (GO:0043024);|Cellular Component: multi-eIF complex (GO:0043614);|Biological Process: maintenance of translational fidelity (GO:1990145); PF01253.21 Translation initiation factor SUI1 TRINITY_DN33113_c0_g1_i1 2.697768056 5.395536111 0 0 #NAME? 0.030377212 0.095163062 Down 1.504493 0.887825 0.6906552 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33115_c0_g1_i1 5.34170577 1.375818376 9.307593163 6.765132177 2.758118122 0.036441609 0.110198786 Up 0.1620562 0.1605128 0.2455907 1.286368 0.5697286 0.9133697 XP_020550498.1 "calcium-transporting ATPase 12, plasma membrane-type [Sesamum indicum]" Q9LIK7|ACA13_ARATH "Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA13 PE=3 SV=1" sind:105163368 K01537 E3.6.3.8 Ca2+-transporting ATPase -- -- KOG0204 Calcium transporting ATPase [P] METABOLISM Inorganic ion transport and metabolism P ENOG410XNNC "ATPase, Ca transporting, plasma membrane" Molecular Function: calcium-transporting ATPase activity (GO:0005388);|Molecular Function: calmodulin binding (GO:0005516);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of plasma membrane (GO:0005887);|Molecular Function: metal ion binding (GO:0046872); PF13246.5 Cation transport ATPase (P-type) TRINITY_DN33116_c0_g1_i1 8.177646867 0 16.35529373 Inf Inf 3.00E-06 2.67E-05 Up 0 0 0 3.104746 1.405856 2.043964 AOQ04738.1 "eIF-5A-RA, partial [synthetic construct]" O94083|IF5A_CANAL Eukaryotic translation initiation factor 5A OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=ANB1 PE=3 SV=2 ela:UCREL1_9874 K03263 EIF5A translation initiation factor 5A -- -- KOG3271 Translation initiation factor 5A (eIF-5A) [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0231 "Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (By similarity)" Molecular Function: translation elongation factor activity (GO:0003746);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: translational frameshifting (GO:0006452);|Molecular Function: ribosome binding (GO:0043022);|Biological Process: positive regulation of translational elongation (GO:0045901);|Biological Process: positive regulation of translational termination (GO:0045905); PF01287.19 "Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold" TRINITY_DN33117_c0_g1_i1 14.06005318 28.12010637 0 0 #NAME? 1.84E-09 2.54E-08 Down 2.798965 5.980198 4.833334 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33118_c0_g1_i1 9.347233634 15.31131064 3.383156624 0.220958003 -2.178155908 0.016471985 0.057660204 Down 1.058773 1.209698 1.617095 0.09839285 0.1938679 0.4210614 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33119_c0_g1_i1 18.43691734 0.325611563 36.54822312 112.2448564 6.810505525 3.21E-12 5.95E-11 Up 0.07385846 0 0 1.852185 2.612892 1.374497 XP_012828949.1 PREDICTED: peroxidase A2-like [Erythranthe guttata] P11965|PERX_TOBAC Lignin-forming anionic peroxidase OS=Nicotiana tabacum OX=4097 PE=2 SV=1 pper:PRUPE_ppa027053mg K00430 E1.11.1.7 peroxidase ko00940 Phenylpropanoid biosynthesis -- -- -- -- -- G ENOG4111S7R peroxidase Molecular Function: peroxidase activity (GO:0004601);|Cellular Component: extracellular region (GO:0005576);|Biological Process: response to oxidative stress (GO:0006979);|Molecular Function: heme binding (GO:0020037);|Biological Process: hydrogen peroxide catabolic process (GO:0042744);|Molecular Function: metal ion binding (GO:0046872); PF00141.22 Peroxidase TRINITY_DN33125_c0_g1_i1 5.653538239 11.30707648 0 0 #NAME? 0.000428544 0.002463018 Down 1.131407 2.722073 1.084316 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33126_c0_g1_i1 8.958662124 17.91732425 0 0 #NAME? 2.71E-06 2.42E-05 Down 1.792828 1.977436 3.359014 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33128_c0_g1_i1 7.128132852 1.050206813 13.20605889 12.57472217 3.65245462 0.005596539 0.023336735 Up 0 0.1600953 0.2582152 1.858465 1.549785 0.3392275 XP_015931684.1 uncharacterized protein LOC107458002 [Arachis duranensis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN33129_c0_g1_i1 9.379626496 18.03478252 0.724470471 0.040170735 -4.637711328 6.76E-05 0.000464994 Down 4.088568 3.479331 3.665528 0 0.3582475 0 ABM85464.1 "ribosomal protein S28, partial [synthetic construct]" P0CT79|RS28A_SCHPO 40S ribosomal protein S28-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rps2801 PE=3 SV=1 spo:SPAC25G10.06 K02979 "RP-S28e, RPS28" small subunit ribosomal protein S28e ko03010 Ribosome KOG3502 40S ribosomal protein S28 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " S ENOG4110Q4D NA Biological Process: ribosomal small subunit assembly (GO:0000028);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Biological Process: maturation of SSU-rRNA (GO:0030490);|Biological Process: ribosome biogenesis (GO:0042254); -- -- TRINITY_DN33134_c0_g1_i1 3.508696766 7.017393532 0 0 #NAME? 0.009036532 0.035032477 Down 1.68118 1.07799 1.294659 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33136_c0_g1_i1 32.87017386 14.3885635 51.35178422 3.568930576 1.835491838 0.000138692 0.000893126 Up 1.925746 1.487897 2.730279 7.775211 4.000436 5.956884 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33137_c0_g1_i1 5.221888348 10.4437767 0 0 #NAME? 0.010893103 0.040834968 Down 1.15377 0.2771212 2.647718 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33142_c0_g1_i1 12.10624242 19.10427391 5.108210939 0.267385767 -1.90300542 0.016378506 0.05740634 Down 2.023559 3.56695 3.487185 1.001658 1.02194 0 XP_015062642.1 "PREDICTED: pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isoform X1 [Solanum pennellii]" Q9SQU6|PP216_ARATH "Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=2 SV=1" -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- "PF13041.5,PF01535.19,PF13812.5,PF12854.6,PF17177.3" PPR repeat family|PPR repeat|Pentatricopeptide repeat domain|PPR repeat|Pentacotripeptide-repeat region of PRORP TRINITY_DN33143_c0_g1_i1 35.08286921 70.16573842 0 0 #NAME? 1.36E-22 5.19E-21 Down 6.517125 6.763773 7.140203 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33150_c0_g1_i1 23.0753425 46.150685 0 0 #NAME? 4.54E-15 1.06E-13 Down 7.748101 6.583989 7.270219 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33151_c0_g1_i1 7.526855697 15.05371139 0 0 #NAME? 4.80E-05 0.000341112 Down 2.162334 4.307103 1.393029 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33155_c0_g1_i1 10.58770078 21.17540156 0 0 #NAME? 3.63E-07 3.72E-06 Down 3.335651 3.280823 2.046362 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33157_c0_g1_i1 5.90351842 9.914653432 1.892383409 0.190867328 -2.389357926 0.048268135 0.137697049 Down 1.906515 1.334496 1.489004 0.2313761 0 0.5147894 KRH12253.1 hypothetical protein GLYMA_15G162400 [Glycine max] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- PF14111.5 Domain of unknown function (DUF4283) TRINITY_DN33158_c0_g1_i1 6.505812013 13.01162403 0 0 #NAME? 0.000122939 0.000799509 Down 2.372636 1.042092 1.302739 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33159_c0_g1_i1 13.88528432 27.77056864 0 0 #NAME? 2.33E-09 3.18E-08 Down 3.239302 3.556342 4.183005 6.84E-73 8.17E-84 5.74E-43 AAA57047.1 "ubiquitin, partial [synthetic construct]" P62981|RS27A_SOLTU Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum OX=4113 GN=UBI3 PE=2 SV=2 sot:102577606 K02977 "RP-S27Ae, RPS27A" small subunit ribosomal protein S27Ae ko03010 Ribosome KOG0004 Ubiquitin/40S ribosomal protein S27a fusion [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " O COG5272 ubiquitin Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Molecular Function: metal ion binding (GO:0046872); "PF00240.22,PF01599.18,PF11976.7,PF14560.5" Ubiquitin family|Ribosomal protein S27a|Ubiquitin-2 like Rad60 SUMO-like|Ubiquitin-like domain TRINITY_DN33166_c0_g1_i1 22.38581355 42.57711989 2.194507208 0.051541936 -4.278109448 1.41E-09 1.97E-08 Down 4.670982 5.401171 3.523816 0.3504511 0.1733187 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33170_c0_g1_i1 6.066624547 0 12.13324909 Inf Inf 0.026192619 0.084377372 Up 0 0 0 0 1.446194 3.931163 AIC63084.1 "MYH7, partial [synthetic construct]" O14157|MYO3_SCHPO Myosin type-2 heavy chain 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=myo3 PE=1 SV=1 -- -- -- -- -- -- KOG0161 Myosin class II heavy chain [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5022 myosin heavy chain "Biological Process: mitotic cytokinesis (GO:0000281);|Molecular Function: motor activity (GO:0003774);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: actomyosin contractile ring (GO:0005826);|Cellular Component: myosin II complex (GO:0016460);|Cellular Component: medial cortex (GO:0031097);|Cellular Component: cell division site (GO:0032153);|Molecular Function: actin filament binding (GO:0051015);|Biological Process: nuclear migration during mitotic telophase (GO:0090561);|Cellular Component: actomyosin contractile ring, proximal layer (GO:0120104);|Biological Process: mitotic actomyosin contractile ring contraction (GO:1902404);|Biological Process: mitotic actomyosin contractile ring assembly (GO:1903475);" PF00063.20 Myosin head (motor domain) TRINITY_DN33172_c0_g1_i1 189.6855665 323.7890415 55.5820915 0.171661435 -2.542362131 2.95E-34 1.94E-32 Down 46.48988 48.93804 42.94043 6.958754 4.716922 7.556926 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33177_c0_g1_i1 3.72791089 7.45582178 0 0 #NAME? 0.047754097 0.136565345 Down 3.033302 0.5857587 0.4626413 0 0 0 XP_019168246.1 PREDICTED: uncharacterized protein LOC109163967 [Ipomoea nil] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF09337.9 His(2)-Cys(2) zinc finger TRINITY_DN33178_c0_g1_i1 8.1058278 16.2116556 0 0 #NAME? 1.11E-05 8.92E-05 Down 1.793996 5.114729 3.172658 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3317_c0_g1_i1 6.55524056 13.11048112 0 0 #NAME? 0.00010822 0.000712254 Down 2.652908 2.598631 2.460515 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33180_c0_g1_i1 5.163018952 10.3260379 0 0 #NAME? 0.000922422 0.004855795 Down 3.240872 1.404825 1.138794 0 0 0 AAS86322.1 germacrene D synthase [Pogostemon cablin] Q49SP4|TPGD1_POGCB Germacrene D synthase 1 OS=Pogostemon cablin OX=28511 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41118IF "Terpene synthase, N-terminal domain" Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: cytosol (GO:0005829);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate metabolic process (GO:0045338);|Biological Process: sesquiterpene biosynthetic process (GO:0051762); PF01397.20 "Terpene synthase, N-terminal domain" TRINITY_DN3318_c0_g1_i1 25.1208411 15.16188649 35.07979572 2.313682782 1.210191077 0.01522162 0.05401884 Up 1.339807 1.108254 0.5435672 1.734035 1.549621 2.266669 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33195_c0_g1_i1 7.799769443 0 15.59953889 Inf Inf 7.44E-05 0.000507263 Up 0 0 0 2.528761 0.752857 1.205957 ACL85488.1 "CG7777-PB, partial [synthetic construct]" Q651D5|PIP27_ORYSJ Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica OX=39947 GN=PIP2-7 PE=2 SV=2 obr:102706125 K09872 PIP aquaporin PIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Cellular Component: vacuole (GO:0005773);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to water deprivation (GO:0009414);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: water channel activity (GO:0015250);|Cellular Component: integral component of membrane (GO:0016021); PF00230.19 Major intrinsic protein TRINITY_DN33199_c0_g1_i1 29.96117791 59.92235582 0 0 #NAME? 2.03E-19 6.41E-18 Down 6.306485 10.16113 8.732491 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33200_c0_g1_i1 3.350331134 6.700662267 0 0 #NAME? 0.016459978 0.057629602 Down 1.719085 0 1.792595 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33203_c0_g1_i1 5.103360923 1.248358704 8.958363141 7.176113014 2.843202611 0.028962108 0.091612449 Up 0 0.7423918 0 1.792174 0.9147059 1.74129 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33206_c0_g1_i1 7.012478804 12.9382519 1.086705707 0.083991695 -3.573609508 0.007814853 0.030997871 Down 3.986995 1.424446 1.507351 0 0.4644445 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33207_c0_g1_i1 11.26052928 22.52105855 0 0 #NAME? 4.41E-05 0.000315531 Down 2.049769 5.724923 2.229163 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33208_c0_g1_i1 12.33391768 24.66783535 0 0 #NAME? 2.26E-08 2.72E-07 Down 3.423391 3.047866 3.979256 0 0 0 SJX25888.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" O14069|RL28E_SCHPO Probable 60S ribosomal protein L28e OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl44 PE=1 SV=1 ssl:SS1G_08976 K02903 "RP-L28e, RPL28" large subunit ribosomal protein L28e ko03010 Ribosome KOG3412 60S ribosomal protein L28 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J ENOG4111T32 protein complex subunit organization Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF01778.16 Ribosomal L28e protein family TRINITY_DN33214_c0_g1_i1 6.203566065 12.40713213 0 0 #NAME? 0.01888056 0.06463388 Down 1.884614 5.378116 0.478447 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33225_c0_g1_i1 7.1113704 2.113935513 12.10880529 5.728086413 2.518053257 0.023845284 0.078129709 Up 0.1410059 0.1381641 0.5337445 1.813179 1.551202 0.4137182 KZV38206.1 "histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like [Dorcoceras hygrometricum]" Q9C5P4|SUVH3_ARATH "Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Arabidopsis thaliana OX=3702 GN=SUVH3 PE=2 SV=2" sind:105160666 K11420 EHMT euchromatic histone-lysine N-methyltransferase ko00310 Lysine degradation -- -- -- -- -- S COG2940 Histone-lysine N-methyltransferase "Cellular Component: chromosome, centromeric region (GO:0000775);|Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Cellular Component: chromosome (GO:0005694);|Molecular Function: zinc ion binding (GO:0008270);|Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);|Biological Process: regulation of gene expression, epigenetic (GO:0040029);|Molecular Function: histone methyltransferase activity (GO:0042054);" PF02182.16 SAD/SRA domain TRINITY_DN33234_c0_g1_i1 41.42683175 78.14460544 4.709058062 0.060260821 -4.052635867 4.29E-15 9.99E-14 Down 15.66154 15.96007 10.16964 0 2.007773 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33235_c0_g1_i1 6.375470996 12.75094199 0 0 #NAME? 0.007468711 0.029822942 Down 5.161422 1.661612 0.898536 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33241_c0_g1_i1 9.482727869 1.143301217 17.82215452 15.58832813 3.9623943 0.000134883 0.000870329 Up 0.2373112 0 0.1804052 1.41343 2.594954 2.163688 AIC62023.1 "RPS12, partial [synthetic construct]" Q9SMI3|RS12_CYAPA 40S ribosomal protein S12 OS=Cyanophora paradoxa OX=2762 GN=RPS12 PE=2 SV=1 mus:103969081 K02951 "RP-S12e, RPS12" small subunit ribosomal protein S12e ko03010 Ribosome KOG3406 40S ribosomal protein S12 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1358 (ribosomal) protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF01248.25 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TRINITY_DN3324_c0_g1_i1 4.623614257 9.247228514 0 0 #NAME? 0.002071977 0.009929608 Down 2.328583 3.054543 0.6031642 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33253_c0_g1_i1 8.540376448 17.0807529 0 0 #NAME? 7.00E-06 5.82E-05 Down 1.92604 3.135074 1.249047 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3325_c0_g1_i1 6.753191011 13.50638202 0 0 #NAME? 0.000252896 0.001536364 Down 3.540007 0.6939471 3.842137 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33270_c0_g1_i1 13.04120847 0 26.08241694 Inf Inf 1.29E-09 1.82E-08 Up 0 0 0 4.407975 3.254114 4.639813 AOQ03520.1 "RpS6-RB, partial [synthetic construct]" Q6BXH8|RS6_DEBHA 40S ribosomal protein S6 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=RPS6 PE=3 SV=1 tmn:UCRPA7_5130 K02991 "RP-S6e, RPS6" small subunit ribosomal protein S6e ko03010 Ribosome KOG1646 40S ribosomal protein S6 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2125 40s ribosomal protein s6 Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); -- -- TRINITY_DN33286_c0_g1_i1 7.91329654 13.24102358 2.585569504 0.19526961 -2.356460659 0.023383774 0.076867237 Down 0.9526772 2.210188 1.120912 0.4751468 0.116971 0.1262607 PIN22283.1 "Vesicle coat complex COPI, zeta subunit [Handroanthus impetiginosus]" Q940S5|COPZ1_ARATH Coatomer subunit zeta-1 OS=Arabidopsis thaliana OX=3702 GN=At1g60970 PE=2 SV=1 spen:107012281 K20472 "COPZ, RET3" coatomer subunit zeta -- -- KOG3343 "Vesicle coat complex COPI, zeta subunit" [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U COG5541 vesicle-mediated transport "Cellular Component: Golgi membrane (GO:0000139);|Biological Process: intracellular protein transport (GO:0006886);|Biological Process: retrograde vesicle-mediated transport, Golgi to ER (GO:0006890);|Biological Process: intra-Golgi vesicle-mediated transport (GO:0006891);|Cellular Component: COPI vesicle coat (GO:0030126);" PF01217.19 Clathrin adaptor complex small chain TRINITY_DN3328_c0_g1_i1 12.47046216 3.422582157 21.51834216 6.287165997 2.652409854 0.000654465 0.003584041 Up 1.102882 0 0.1688247 2.73031 1.895614 1.897061 BAJ88402.1 predicted protein [Hordeum vulgare subsp. vulgare] P34788|RS18_ARATH 40S ribosomal protein S18 OS=Arabidopsis thaliana OX=3702 GN=RPS18A PE=1 SV=1 pop:POPTR_0002s05220g K02964 "RP-S18e, RPS18" small subunit ribosomal protein S18e ko03010 Ribosome KOG3311 Ribosomal protein S18 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0099 "Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits" Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cell wall (GO:0005618);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Cellular Component: ribosome (GO:0005840);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translational initiation (GO:0006413);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF00416.21 Ribosomal protein S13/S18 TRINITY_DN33290_c0_g1_i1 10.50280134 19.55666175 1.448940942 0.07408938 -3.754589431 0.002714524 0.012546624 Down 6.011108 2.296175 2.333107 0 0.6624092 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33294_c0_g1_i1 3.88585623 7.771712461 0 0 #NAME? 0.028116573 0.089470423 Down 1.639591 0 3.194172 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33297_c0_g1_i1 6.239222524 1.628057814 10.85038723 6.664620345 2.736522693 0.015745435 0.055573636 Up 0.6852906 0 0 0.4129915 1.454883 1.826541 EYU21848.1 hypothetical protein MIMGU_mgv1a023991mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33299_c0_g1_i1 3.956565196 0 7.913130391 Inf Inf 0.017396391 0.060257488 Up 0 0 0 0 1.170399 2.074307 AOQ14644.1 CG10407-PA [synthetic construct] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111E6P Haemolymph juvenile hormone binding protein (JHBP) -- PF06585.10 Haemolymph juvenile hormone binding protein (JHBP) TRINITY_DN33300_c0_g1_i1 5.196875786 9.236386532 1.15736504 0.125304959 -2.996484578 0.02678428 0.085941811 Down 1.41314 1.86722 1.810951 0 0 0.5050021 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33309_c0_g1_i1 4.084008122 8.168016243 0 0 #NAME? 0.003596317 0.015963977 Down 1.258625 0.9617878 1.911505 0 0 0 AAX29657.1 "DEAD box polypeptide 5, partial [synthetic construct]" A1C6C4|DBP2_ASPCL ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) OX=344612 GN=dbp2 PE=3 SV=1 afm:AFUA_2G10750 K12823 "DDX5, DBP2" ATP-dependent RNA helicase DDX5/DBP2 ko03040 Spliceosome KOG0331 ATP-dependent RNA helicase [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification L COG0513 purine NTP-dependent helicase activity "Biological Process: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: helicase activity (GO:0004386);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: rRNA processing (GO:0006364);" PF00271.30 Helicase conserved C-terminal domain TRINITY_DN33311_c0_g1_i1 4.66628186 9.332563721 0 0 #NAME? 0.020694816 0.069657406 Down 0.684776 3.450665 0.809636 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33313_c0_g1_i1 5.025496701 10.0509934 0 0 #NAME? 0.008805046 0.034272632 Down 2.858901 0 3.077214 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33316_c0_g1_i1 21.11838538 31.79536567 10.44140509 0.32839393 -1.606500633 0.006580259 0.026777024 Down 7.33763 5.096041 4.15498 1.765311 0.8944263 1.646312 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33317_c0_g1_i1 21.97160869 43.94321738 0 0 #NAME? 1.95E-14 4.28E-13 Down 4.583829 6.311903 6.133664 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33319_c0_g1_i1 10.40151197 20.80302394 0 0 #NAME? 4.26E-07 4.32E-06 Down 3.064868 5.410037 3.34237 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33320_c0_g1_i1 5.569744425 11.13948885 0 0 #NAME? 0.009513424 0.03656896 Down 3.214459 3.772542 0 0 0 0 KHN35842.1 Beta-galactosidase [Glycine soja] P48981|BGAL_MALDO Beta-galactosidase OS=Malus domestica OX=3750 PE=1 SV=1 -- -- -- -- -- -- KOG0496 Beta-galactosidase [G] METABOLISM Carbohydrate transport and metabolism G COG1874 beta-galactosidase Molecular Function: beta-galactosidase activity (GO:0004565);|Biological Process: carbohydrate metabolic process (GO:0005975);|Cellular Component: apoplast (GO:0048046); PF01301.18 Glycosyl hydrolases family 35 TRINITY_DN33325_c0_g1_i1 8.450741351 16.9014827 0 0 #NAME? 5.44E-06 4.61E-05 Down 2.063718 1.988167 4.08401 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33326_c0_g1_i1 2.272897807 0 4.545795613 Inf Inf 0.040091694 0.118892159 Up 0 0 0 0.3821577 0.381931 1.56677 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33327_c0_g1_i1 5.675161022 11.35032204 0 0 #NAME? 0.000355636 0.002085979 Down 1.463492 1.789694 2.318011 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3332_c0_g1_i1 16.9102213 28.27124651 5.54919609 0.196284097 -2.348984806 0.006989436 0.028216955 Down 5.856197 4.235022 2.065736 1.666381 1.93E-86 0.3283604 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33333_c0_g1_i1 11.06814972 17.61651426 4.519785186 0.256565239 -1.962602378 0.023760594 0.077902827 Down 4.627828 1.809537 2.175688 0.8782634 0 0.9251499 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33336_c0_g1_i1 22.4940496 44.98809921 0 0 #NAME? 1.14E-14 2.56E-13 Down 10.93101 7.480553 8.52176 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33338_c0_g1_i1 4.514331579 0 9.028663158 Inf Inf 0.005866686 0.024304688 Up 0 0 0 0.2162398 1.282069 2.252131 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33340_c0_g1_i1 15.94679937 28.58601609 3.307582659 0.115706318 -3.111460456 3.99E-05 0.000288239 Down 7.445581 4.882425 4.004795 1.445671 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33345_c0_g1_i1 14.05797031 23.22864625 4.887294371 0.210399449 -2.248797169 0.001983691 0.009561018 Down 4.205931 3.110224 6.576719 1.243838 0 1.172734 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33346_c0_g1_i1 9.487426277 18.97485255 0 0 #NAME? 7.42E-06 6.15E-05 Down 2.038554 2.930742 5.517287 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33352_c0_g1_i1 6.960143399 13.19581633 0.724470471 0.054901527 -4.187009904 0.001332357 0.006731182 Down 1.345518 3.922842 2.805291 0 0.3122856 0 SJX48204.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" P0CQ51|RL44_CRYNB 60S ribosomal protein L44 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=RPL44 PE=3 SV=1 mrr:Moror_7163 K02929 "RP-L44e, RPL44" large subunit ribosomal protein L44e ko03010 Ribosome KOG3464 60S ribosomal protein L44 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1631 Ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Biological Process: response to cycloheximide (GO:0046898); PF00935.18 Ribosomal protein L44 TRINITY_DN33358_c0_g1_i1 10.79163277 21.58326555 0 0 #NAME? 2.36E-07 2.48E-06 Down 2.009862 1.672804 1.72523 0 0 0 ABM86866.1 "ribosomal protein L7a, partial [synthetic construct]" P35685|RL7A1_ORYSJ 60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 PE=2 SV=1 yli:YALI0F24695g K02936 "RP-L7Ae, RPL7A" large subunit ribosomal protein L7Ae ko03010 Ribosome KOG3166 60S ribosomal protein L7A [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1358 (ribosomal) protein Biological Process: maturation of LSU-rRNA (GO:0000470);|Molecular Function: RNA binding (GO:0003723);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF01248.25 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TRINITY_DN33359_c0_g1_i1 16.88932735 0 33.77865469 Inf Inf 2.66E-12 4.97E-11 Up 0 0 0 4.365836 3.830948 3.776701 SJX26618.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" P08903|H32_ENCAL Histone H3.2 OS=Encephalartos altensteinii OX=3300 PE=1 SV=2 -- -- -- -- -- -- KOG1745 Histones H3 and H4 [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics B COG2036 "Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling" Cellular Component: nucleosome (GO:0000786);|Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Molecular Function: protein heterodimerization activity (GO:0046982); PF00125.23 Core histone H2A/H2B/H3/H4 TRINITY_DN33362_c0_g1_i1 23.5967729 33.37425804 13.81928777 0.414070262 -1.272052501 0.015435124 0.054665413 Down 1.318 1.433606 2.039773 0.5070717 0.408259 0.6909411 XP_011070192.1 peroxidase 44 [Sesamum indicum] Q43729|PER57_ARATH Peroxidase 57 OS=Arabidopsis thaliana OX=3702 GN=PER57 PE=1 SV=1 sind:105155907 K00430 E1.11.1.7 peroxidase ko00940 Phenylpropanoid biosynthesis -- -- -- -- -- G ENOG4110UVG peroxidase Molecular Function: peroxidase activity (GO:0004601);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Molecular Function: heme binding (GO:0020037);|Biological Process: hydrogen peroxide catabolic process (GO:0042744);|Molecular Function: metal ion binding (GO:0046872); PF00141.22 Peroxidase TRINITY_DN33369_c0_g1_i1 76.54555997 4.505595433 148.5855245 32.97799962 5.043431985 2.75E-37 2.00E-35 Up 0.08298933 0.1596035 0.1871792 4.182574 4.439199 3.521476 AOQ15476.1 Ef1alpha100E-PA [synthetic construct] Q01372|EF1A_NEUCR Elongation factor 1-alpha OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=tef-1 PE=3 SV=2 clu:CLUG_00178 K03231 EEF1A elongation factor 1-alpha ko03013 RNA transport KOG0052 Translation elongation factor EF-1 alpha/Tu [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG5256 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity) Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: translation (GO:0006412);|Biological Process: translational elongation (GO:0006414); "PF00009.26,PF03143.16,PF03144.24" Elongation factor Tu GTP binding domain|Elongation factor Tu C-terminal domain|Elongation factor Tu domain 2 TRINITY_DN33372_c0_g1_i1 15.82414523 23.88139336 7.766897092 0.32522797 -1.620476757 0.015428131 0.054644908 Down 1.780532 4.437129 4.001647 1.046284 1.048437 0.6227983 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33373_c0_g1_i1 15.27926617 30.55853234 0 0 #NAME? 3.54E-10 5.31E-09 Down 3.366596 4.671736 3.587706 2.18E-44 5.44E-49 2.09E-54 XP_013616937.1 "PREDICTED: uncharacterized protein LOC106323344, partial [Brassica oleracea var. oleracea]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN33376_c0_g1_i1 3.554464566 7.108929132 0 0 #NAME? 0.00868697 0.033891502 Down 0.3989885 0.722349 0.3800317 0 0 0 AIC59017.1 "HNRNPA2B1, partial [synthetic construct]" O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1 ppa:PAS_chr1-4_0355 K14411 MSI RNA-binding protein Musashi ko03015 mRNA surveillance pathway KOG0118 FOG: RRM domain [R] POORLY CHARACTERIZED General function prediction only S COG0724 Rna-binding protein Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA 3'-UTR binding (GO:0003730);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleoplasm (GO:0005654);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: mRNA cleavage factor complex (GO:0005849);|Biological Process: mRNA polyadenylation (GO:0006378);|Biological Process: mRNA cleavage (GO:0006379);|Cellular Component: ribonucleoprotein complex (GO:1990904); "PF00076.21,PF16367.4" "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)|RNA recognition motif" TRINITY_DN33378_c0_g1_i1 3.609112664 7.218225328 0 0 #NAME? 0.007010909 0.028291063 Down 0.9772953 0.5697748 1.631561 0 0 0 BAI45918.1 "amino-terminal enhancer of split, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG0639 Transducin-like enhancer of split protein (contains WD40 repeats) [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics S ENOG410XPX3 Transducin-like enhancer of split -- PF03920.14 Groucho/TLE N-terminal Q-rich domain TRINITY_DN33382_c0_g1_i1 4.477010267 8.954020535 0 0 #NAME? 0.003742046 0.016536478 Down 1.454032 0.481252 2.964116 0 0 0 PON87341.1 "hypothetical protein TorRG33x02_168330, partial [Trema orientale]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33388_c0_g1_i1 5.617920309 9.776351778 1.45948884 0.149287676 -2.743833019 0.030879207 0.096489286 Down 1.342957 1.31027 2.334197 0.2822884 0.2845219 0 XP_022762289.1 uncharacterized protein LOC111308244 [Durio zibethinus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03107.15 C1 domain TRINITY_DN33400_c0_g1_i1 37.09557686 73.41957703 0.771576693 0.010509141 -6.572211427 5.61E-21 1.97E-19 Down 7.71847 9.236952 5.754258 0 0 0.1505862 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33409_c0_g1_i1 5.595541028 10.44305847 0.748023582 0.071628784 -3.803316735 0.008628353 0.033700468 Down 2.365184 3.361447 0.7804151 0 0.2367485 0.2798971 AAX28983.1 "ribosomal protein L36, partial [synthetic construct]" Q9LRB8|RL36_ULVCO 60S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1 vcn:VOLCADRAFT_109213 K02920 "RP-L36e, RPL36" large subunit ribosomal protein L36e ko03010 Ribosome KOG3452 60S ribosomal protein L36 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG5051 60S ribosomal protein l36 Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF01158.17 Ribosomal protein L36e TRINITY_DN33411_c0_g1_i1 3.302443979 6.604887959 0 0 #NAME? 0.012815639 0.046850311 Down 1.712498 0.9445444 0.7585227 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33415_c0_g1_i1 7.400796225 0 14.80159245 Inf Inf 1.01E-05 8.17E-05 Up 0 0 0 2.448283 1.6274 1.263126 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33418_c0_g1_i1 17.77071062 2.405181808 33.13623944 13.77702065 3.784192027 6.08E-06 5.11E-05 Up 0.2067632 0.199783 0.1023858 1.855171 2.684424 1.077358 ACL91113.1 RpL6-PB [synthetic construct] Q9C9C5|RL63_ARATH 60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1 psq:PUNSTDRAFT_51072 K02934 "RP-L6e, RPL6" large subunit ribosomal protein L6e ko03010 Ribosome KOG1694 60s ribosomal protein L6 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2163 (ribosomal) protein Biological Process: ribosomal large subunit assembly (GO:0000027);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF01159.18 Ribosomal protein L6e TRINITY_DN33419_c0_g1_i1 9.589849826 0 19.17969965 Inf Inf 2.93E-07 3.04E-06 Up 0 0 0 0.8723715 1.410956 0.6530467 NP_001315732.1 dehydrin COR47-like [Malus domestica] P46524|CO410_WHEAT Dehydrin COR410 OS=Triticum aestivum OX=4565 GN=COR410 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZBHP dehydrin Biological Process: response to water (GO:0009415); PF00257.18 Dehydrin TRINITY_DN33420_c0_g1_i1 19.49227536 38.98455071 0 0 #NAME? 7.47E-13 1.46E-11 Down 2.220843 3.438197 2.86915 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33421_c0_g1_i1 64.19184482 104.6293673 23.75432232 0.22703303 -2.139025889 5.04E-10 7.43E-09 Down 8.651523 7.612637 6.559006 1.245868 1.560803 1.352786 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF07464.10 Apolipophorin-III precursor (apoLp-III) TRINITY_DN33423_c0_g1_i1 2.724592978 5.449185955 0 0 #NAME? 0.025116981 0.081519744 Down 0 1.308498 1.420029 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33427_c0_g1_i1 39.71547939 59.91503433 19.51592446 0.325726667 -1.618266256 0.000132275 0.000855441 Down 1.875 2.842083 2.328513 0.6835626 0.8112231 0.3237271 XP_012838752.1 PREDICTED: ferruginol synthase-like [Erythranthe guttata] S4UX02|CYPH1_SALMI Ferruginol synthase OS=Salvia miltiorrhiza OX=226208 GN=CYP76AH1 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN33429_c0_g1_i1 4.140977014 8.281954028 0 0 #NAME? 0.003152774 0.014255789 Down 1.233792 0.6061205 2.192638 0 0 0 XP_011087064.1 uncharacterized protein LOC105168628 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33430_c0_g1_i1 8.004260514 0 16.00852103 Inf Inf 4.01E-06 3.48E-05 Up 0 0 0 2.268514 1.992379 2.420668 ACL92241.1 RpS17-PB [synthetic construct] Q9P7J6|RS17B_SCHPO 40S ribosomal protein S17-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rps1702 PE=1 SV=1 pco:PHACADRAFT_254152 K02962 "RP-S17e, RPS17" small subunit ribosomal protein S17e ko03010 Ribosome KOG0187 40S ribosomal protein S17 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1383 Ribosomal protein Biological Process: cytoplasmic translational elongation (GO:0002182);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Biological Process: ribosome biogenesis (GO:0042254); PF00833.17 Ribosomal S17 TRINITY_DN33435_c0_g1_i1 10.9312821 2.651220853 19.21134334 7.246225194 2.857229642 0.000945086 0.004965884 Up 0.3379777 0.3232952 0.2517688 2.501039 2.119186 1.38182 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33438_c0_g1_i1 7.683906277 13.18385324 2.183959311 0.165654098 -2.593754206 0.014948257 0.053205633 Down 1.250501 1.728273 1.734814 0.2445988 0.3645098 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33439_c0_g1_i1 8.39004886 0 16.78009772 Inf Inf 2.19E-06 1.99E-05 Up 0 0 0 2.111345 1.843129 2.60177 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33441_c0_g1_i1 9.282746046 0.651223126 17.91426897 27.50864989 4.78181343 5.97E-05 0.000415321 Up 0.3356443 0 0 3.215716 0.9757355 2.523808 XP_016647002.1 PREDICTED: uncharacterized protein LOC107880269 [Prunus mume] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF14223.5,PF14244.5" gag-polypeptide of LTR copia-type|gag-polypeptide of LTR copia-type TRINITY_DN33442_c0_g1_i1 5.405221839 0.492078091 10.31836559 20.96895954 4.390183373 0.003856449 0.016952916 Up 0 0 0.2200904 1.709928 1.955444 0.8251814 AOQ06355.1 "CG14235-RB, partial [synthetic construct]" O94581|COX12_SCHPO Cytochrome c oxidase subunit 6B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox12 PE=3 SV=2 spo:SPCC1442.08c K02267 COX6B cytochrome c oxidase subunit 6b ko00190 Oxidative phosphorylation KOG3057 "Cytochrome c oxidase, subunit VIb/COX12" [C] METABOLISM Energy production and conversion O ENOG41121WM cytochrome C oxidase Cellular Component: mitochondrial respiratory chain complex IV (GO:0005751);|Biological Process: mitochondrial respiratory chain complex IV assembly (GO:0033617); PF02297.16 Cytochrome oxidase c subunit VIb TRINITY_DN33448_c0_g1_i1 6.969287526 13.93857505 0 0 #NAME? 0.000287403 0.001722258 Down 0.8090288 3.457285 1.827077 0 0 0 XP_019149798.1 PREDICTED: glutamate dehydrogenase A isoform X2 [Ipomoea nil] O04937|DHEA_NICPL Glutamate dehydrogenase A OS=Nicotiana plumbaginifolia OX=4092 GN=GDHA PE=2 SV=1 pop:POPTR_0012s11500g K00261 "GLUD1_2, gdhA" glutamate dehydrogenase (NAD(P)+) ko00910|ko00250|ko00220 "Nitrogen metabolism|Alanine, aspartate and glutamate metabolism|Arginine biosynthesis" KOG2250 Glutamate/leucine/phenylalanine/valine dehydrogenases [E] METABOLISM Amino acid transport and metabolism E COG0334 "oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor" Molecular Function: glutamate dehydrogenase [NAD(P)+] activity (GO:0004353);|Biological Process: cellular amino acid metabolic process (GO:0006520); -- -- TRINITY_DN33452_c0_g1_i1 7.584832952 1.476234274 13.69343163 9.275920411 3.213490441 0.005258997 0.022118976 Up 0 0 0.9258001 0.9831606 3.400953 2.124466 XP_012855499.1 "PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250, partial [Erythranthe guttata]" C0LGS3|Y4372_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana OX=3702 GN=At4g37250 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T ENOG410YAQD LRR receptor-like serine threonine-protein kinase Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN33455_c0_g1_i1 6.889715009 13.77943002 0 0 #NAME? 0.000913456 0.004815855 Down 0.6030334 4.075103 2.378768 0 0 0 -- -- F4IP69|MIP3_ARATH Sec1 family domain-containing protein MIP3 OS=Arabidopsis thaliana OX=3702 GN=MIP3 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: vacuole (GO:0005773);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: vacuolar protein processing (GO:0006624);|Biological Process: vesicle docking involved in exocytosis (GO:0006904);|Biological Process: protein transport (GO:0015031);|Biological Process: protein maturation (GO:0051604); -- -- TRINITY_DN33456_c0_g1_i1 6.909643884 0 13.81928777 Inf Inf 2.36E-05 0.000177801 Up 0 0 0 1.195242 1.028316 1.637085 ACL92746.1 CG10077-PA [synthetic construct] Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=DBP2 PE=3 SV=1 tbl:TBLA_0C05580 K12823 "DDX5, DBP2" ATP-dependent RNA helicase DDX5/DBP2 ko03040 Spliceosome KOG0331 ATP-dependent RNA helicase [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification L COG0513 purine NTP-dependent helicase activity "Biological Process: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: ATP-dependent RNA helicase activity (GO:0004004);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: rRNA processing (GO:0006364);|Biological Process: nuclear polyadenylation-dependent mRNA catabolic process (GO:0071042);|Biological Process: messenger ribonucleoprotein complex assembly (GO:1990120);" PF00270.28 DEAD/DEAH box helicase TRINITY_DN33457_c0_g1_i1 6.487429685 12.97485937 0 0 #NAME? 0.000948414 0.004980488 Down 1.397217 1.369377 4.480469 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33458_c0_g1_i1 8.705750141 15.57395436 1.837545922 0.117988398 -3.083283094 0.002829741 0.013005523 Down 1.669015 4.784627 3.167435 0.8539276 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33459_c0_g1_i1 2.613755389 5.227510779 0 0 #NAME? 0.035627317 0.108306375 Down 0.67463 1.955081 0.343668 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33460_c0_g1_i1 36.25511471 72.51022941 0 0 #NAME? 1.86E-23 7.47E-22 Down 8.364416 7.881494 11.25035 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33462_c0_g1_i1 18.20768761 27.3225767 9.09279853 0.332794327 -1.587297253 0.014987641 0.053313532 Down 6.51474 5.590676 4.035452 1.233577 3.103509 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33463_c0_g1_i1 6.674917437 0 13.34983487 Inf Inf 3.29E-05 0.000241346 Up 0 0 0 0.9547437 0.8142675 0.7237389 BAN84680.1 Large protein [Rabies viral vector pHEP5.0-delG-mRFP] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00946.18 Mononegavirales RNA dependent RNA polymerase TRINITY_DN33464_c0_g1_i1 29.66703286 59.33406572 0 0 #NAME? 1.63E-10 2.54E-09 Down 4.435679 11.3237 7.983427 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33466_c0_g1_i1 7.08267092 0 14.16534184 Inf Inf 0.003752673 0.016568924 Up 0 0 0 0 3.503733 3.129521 AAH70571.1 MGC80045 protein [synthetic construct] P49689|RS30_ARATH 40S ribosomal protein S30 OS=Arabidopsis thaliana OX=3702 GN=RPS30A PE=3 SV=3 -- -- -- -- -- -- KOG0009 Ubiquitin-like/40S ribosomal S30 protein fusion [JO] INFORMATION STORAGE AND PROCESSING|CELLULAR PROCESSES AND SIGNALING "Translation, ribosomal structure and biogenesis |Posttranslational modification, protein turnover, chaperones " J ENOG41123KC 40s ribosomal protein s30 Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); "PF04758.13,PF00240.22" Ribosomal protein S30|Ubiquitin family TRINITY_DN33467_c0_g1_i1 7.604886822 15.20977364 0 0 #NAME? 2.62E-05 0.000195591 Down 1.40828 0.9956764 0.780071 0 0 0 AIC54322.1 "EEF2, partial [synthetic construct]" O23755|EF2_BETVU Elongation factor 2 OS=Beta vulgaris OX=161934 PE=2 SV=1 -- -- -- -- -- -- KOG0469 Elongation factor 2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0480 "Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)" Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737); "PF03764.17,PF00679.23" "Elongation factor G, domain IV|Elongation factor G C-terminus" TRINITY_DN33479_c0_g1_i1 6.69178197 13.38356394 0 0 #NAME? 8.83E-05 0.000592541 Down 2.872984 2.092734 2.511681 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33480_c0_g1_i1 12.7366407 25.47328141 0 0 #NAME? 0.000231081 0.001414438 Down 8.764803 4.786765 1.541112 0 0 0 PIN11053.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q9C6K9|LRL11_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.1 PE=2 SV=1 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN33483_c0_g1_i1 4.588828698 9.177657395 0 0 #NAME? 0.00165637 0.008160146 Down 0.6751645 1.319935 1.818364 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33487_c0_g1_i1 16.88826874 2.286602434 31.48993504 13.77149546 3.783613327 4.54E-07 4.59E-06 Up 0.1725896 0 0.1298322 1.068015 1.130548 0.8955708 ACL91158.1 ATPsyn-beta-PA [synthetic construct] P38482|ATPBM_CHLRE "ATP synthase subunit beta, mitochondrial OS=Chlamydomonas reinhardtii OX=3055 GN=ATP2 PE=1 SV=1" hir:HETIRDRAFT_145736 K02133 "ATPeF1B, ATP5B, ATP2" F-type H+-transporting ATPase subunit beta ko00190 Oxidative phosphorylation KOG1350 "F0F1-type ATP synthase, beta subunit" [C] METABOLISM Energy production and conversion C COG0055 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (By similarity) "Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Biological Process: ATP synthesis coupled proton transport (GO:0015986);|Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261);|Molecular Function: proton-transporting ATP synthase activity, rotational mechanism (GO:0046933);" "PF00006.24,PF02874.22" "ATP synthase alpha/beta family, nucleotide-binding domain|ATP synthase alpha/beta family, beta-barrel domain" TRINITY_DN33497_c0_g1_i1 7.652414867 15.30482973 0 0 #NAME? 0.005424454 0.022725633 Down 1.904233 1.861529 0 0 0 0 AAA33937.1 28 kDa protein [Glycine max] P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max OX=3847 GN=VSPA PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: nutrient reservoir activity (GO:0045735); PF03767.13 "HAD superfamily, subfamily IIIB (Acid phosphatase)" TRINITY_DN33505_c0_g1_i1 17.86610478 26.28857167 9.443637882 0.359229782 -1.477021131 0.018217424 0.062713753 Down 4.295083 2.886591 3.305429 1.318498 0 1.798334 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33510_c0_g1_i1 7.451768079 0 14.90353616 Inf Inf 9.75E-06 7.90E-05 Up 0 0 0 1.824654 1.140139 1.720774 AOQ14482.1 RpL12-PA [synthetic construct] P0CT83|RL12A_SCHPO 60S ribosomal protein L12-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl1201 PE=3 SV=1 cci:CC1G_07364 K02870 "RP-L12e, RPL12" large subunit ribosomal protein L12e ko03010 Ribosome KOG0886 40S ribosomal protein S2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0080 This protein binds directly to 23S ribosomal RNA (By similarity) Biological Process: ribosomal large subunit assembly (GO:0000027);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); "PF03946.13,PF00298.18" "Ribosomal protein L11, N-terminal domain|Ribosomal protein L11, RNA binding domain" TRINITY_DN33511_c0_g1_i1 72.66864325 136.3740087 8.963277773 0.065725704 -3.927398493 5.67E-26 2.61E-24 Down 17.26282 17.80309 16.76171 0.2348927 1.183252 1.32751 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33520_c0_g1_i1 17.65449735 3.015839273 32.29315543 10.70785029 3.420596968 1.04E-06 9.93E-06 Up 0.2499374 0.7136793 0.1903462 3.766279 2.693773 2.734845 AAX43326.1 "ribosomal protein S13, partial [synthetic construct]" P59223|RS131_ARATH 40S ribosomal protein S13-1 OS=Arabidopsis thaliana OX=3702 GN=RPS13A PE=2 SV=1 shs:STEHIDRAFT_76222 K02953 "RP-S13e, RPS13" small subunit ribosomal protein S13e ko03010 Ribosome KOG0400 40S ribosomal protein S13 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0184 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cell wall (GO:0005618);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Molecular Function: small ribosomal subunit rRNA binding (GO:0070181); "PF08069.11,PF00312.21" Ribosomal S13/S15 N-terminal domain|Ribosomal protein S15 TRINITY_DN33521_c0_g1_i1 8.290475216 16.58095043 0 0 #NAME? 8.69E-06 7.10E-05 Down 2.447452 1.112291 1.825341 0 0 0 XP_012842244.1 PREDICTED: transcription factor TCP2-like isoform X1 [Erythranthe guttata] Q93V43|TCP2_ARATH Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YEYG Transcription factor "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: response to blue light (GO:0009637);|Biological Process: leaf morphogenesis (GO:0009965);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of development, heterochronic (GO:0045962);|Biological Process: leaf development (GO:0048366);|Biological Process: positive regulation of nucleic acid-templated transcription (GO:1903508);|Biological Process: positive regulation of photomorphogenesis (GO:2000306);" -- -- TRINITY_DN33522_c0_g1_i1 9.39243137 18.78486274 0 0 #NAME? 1.70E-06 1.57E-05 Down 1.376394 1.886726 1.700898 0 0 0 BAN84680.1 Large protein [Rabies viral vector pHEP5.0-delG-mRFP] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00946.18 Mononegavirales RNA dependent RNA polymerase TRINITY_DN33524_c0_g1_i1 6.192163533 12.38432707 0 0 #NAME? 0.000191221 0.00119363 Down 0.7511216 1.404442 0.7277682 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33526_c0_g1_i1 20.41503991 40.83007982 0 0 #NAME? 1.87E-13 3.85E-12 Down 2.674531 2.003485 2.784217 0 0 0 GAU30026.1 hypothetical protein TSUD_161120 [Trifolium subterraneum] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- PF13966.5 zinc-binding in reverse transcriptase TRINITY_DN33533_c0_g1_i1 37.00848058 50.79501979 23.22194136 0.457169649 -1.129198468 0.011973943 0.044254455 Down 8.747378 5.254085 5.459993 2.043697 3.55854 1.536666 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33545_c0_g1_i1 4.495953145 8.99190629 0 0 #NAME? 0.002119148 0.010120408 Down 2.629794 1.024586 2.009321 0 0 0 ABM82710.1 ribosomal protein S5 [synthetic construct] O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1 vcn:VOLCADRAFT_120316 K02989 "RP-S5e, RPS5" small subunit ribosomal protein S5e ko03010 Ribosome KOG3291 Ribosomal protein S7 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0049 "One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (By similarity)" Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: small ribosomal subunit (GO:0015935); PF00177.20 Ribosomal protein S7p/S5e TRINITY_DN33546_c0_g1_i1 3.690554373 0 7.381108746 Inf Inf 0.003889303 0.017065938 Up 0 0 0 1.402992 1.41115 0.767237 AOQ04644.1 "Fer1HCH-RF, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG2332 Ferritin [P] METABOLISM Inorganic ion transport and metabolism P ENOG4111MSG ferritin -- -- -- TRINITY_DN33553_c0_g1_i1 14.3155344 0 28.6310688 Inf Inf 1.65E-10 2.57E-09 Up 0 0 0 1.82939 2.064815 2.164013 AOQ08538.1 "Cpr62Bc-RA, partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111VJY cuticle protein -- PF00379.22 Insect cuticle protein TRINITY_DN33557_c0_g1_i1 17.67423892 1.441869006 33.90660883 23.51573457 4.555554494 7.92E-09 1.01E-07 Up 0.1109121 0.213582 0.1674331 2.206333 2.399527 2.969894 BAJ91591.1 predicted protein [Hordeum vulgare subsp. vulgare] Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2 fme:FOMMEDRAFT_108329 K02995 "RP-S8e, RPS8" small subunit ribosomal protein S8e ko03010 Ribosome KOG3283 40S ribosomal protein S8 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2007 40S ribosomal protein S8 "Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Biological Process: ribosome assembly (GO:0042255);|Cellular Component: chloroplast ribosome (GO:0043253);" PF01201.21 Ribosomal protein S8e TRINITY_DN33558_c0_g1_i1 7.984110666 2.610655193 13.35756614 5.116557014 2.355173332 0.018509588 0.063584509 Up 0 0.7945711 0.3219098 1.3571 1.708264 1.532767 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33560_c0_g1_i1 18.91993591 28.57165362 9.268218206 0.324385082 -1.624220621 0.007306695 0.029281609 Down 1.800263 1.024654 2.190675 0.4521043 0.4544599 0.4037547 XP_010531643.1 PREDICTED: uncharacterized protein LOC104807900 [Tarenaya hassleriana] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN33564_c0_g1_i1 11.64310973 23.28621946 0 0 #NAME? 1.12E-06 1.06E-05 Down 1.600835 3.669938 1.801316 0 0 0 OMO49946.1 hypothetical protein CCACVL1_30745 [Corchorus capsularis] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN33567_c0_g1_i1 12.62960412 25.25920824 0 0 #NAME? 1.60E-08 1.97E-07 Down 3.473383 2.22404 2.902333 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33570_c0_g1_i1 2.391659921 4.783319842 0 0 #NAME? 0.046894253 0.134615241 Down 0.7989749 1.513027 0.6145815 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33571_c0_g1_i1 9.242879004 2.211671506 16.2740865 7.358274708 2.879367538 0.001867665 0.009058543 Up 0.4554879 0.8692735 0 3.241725 2.511726 1.715415 BAK02182.1 predicted protein [Hordeum vulgare subsp. vulgare] O74893|RS20_SCHPO 40S ribosomal protein S20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rps20 PE=1 SV=1 smo:SELMODRAFT_115495 K02969 "RP-S20e, RPS20" small subunit ribosomal protein S20e ko03010 Ribosome KOG0900 40S ribosomal protein S20 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0051 tRNA binding Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Biological Process: ribosome biogenesis (GO:0042254); PF00338.21 Ribosomal protein S10p/S20e TRINITY_DN33573_c0_g1_i1 33.4203754 65.68338576 1.15736504 0.017620362 -5.826612619 7.21E-18 2.07E-16 Down 15.60917 13.86588 11.49377 0 0 0.5354219 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33575_c0_g1_i1 7.71266463 0.246039046 15.17929021 61.69463947 5.947073237 4.26E-05 0.000305641 Up 0 0 0.1139744 1.231517 1.620615 1.148487 ACL90493.1 Dip-B-PA [synthetic construct] Q10712|AMPL1_SOLLC "Leucine aminopeptidase 1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=LAPA1 PE=1 SV=1" pfp:PFL1_05631 K11142 LAP3 cytosol aminopeptidase ko00330|ko00480 Arginine and proline metabolism|Glutathione metabolism KOG2597 Predicted aminopeptidase of the M17 family [R] POORLY CHARACTERIZED General function prediction only E COG0260 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity) Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: aminopeptidase activity (GO:0004177);|Molecular Function: metalloexopeptidase activity (GO:0008235);|Cellular Component: chloroplast (GO:0009507);|Molecular Function: manganese ion binding (GO:0030145);|Biological Process: protein hexamerization (GO:0034214); PF00883.20 "Cytosol aminopeptidase family, catalytic domain" TRINITY_DN33576_c0_g1_i1 4.37709253 8.029714589 0.724470471 0.090223689 -3.470349916 0.036256745 0.109808009 Down 0.5718918 0.8390234 2.55832 0 0.222315 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33577_c0_g1_i1 10.16333982 19.55510294 0.771576693 0.03945654 -4.663591755 3.02E-05 0.00022328 Down 4.74523 3.018853 2.074105 0 0 0.3622757 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33587_c0_g1_i1 8.013046756 3.017398077 13.00869543 4.311229444 2.108099345 0.028927422 0.091550057 Up 1.248905 0 0.4950024 3.083705 1.233186 1.866324 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33589_c0_g1_i1 7.744309577 15.48861915 0 0 #NAME? 1.96E-05 0.000150399 Down 2.940028 3.706356 2.868809 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33590_c0_g1_i1 8.875732158 3.327928949 14.42353537 4.334087533 2.115728291 0.019725625 0.067056442 Up 0.3392374 0.9731403 0.2682901 2.281834 1.967374 1.363616 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33595_c0_g1_i1 10.78153489 3.589048686 17.97402109 5.008018185 2.324239801 0.005690276 0.023662397 Up 1.534361 0 0.6039772 2.306331 2.307451 4.24147 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN335_c0_g1_i1 7.792633931 12.66629018 2.918977679 0.230452456 -2.117458953 0.039352681 0.11709841 Down 2.407192 1.804394 2.354747 0.5901185 0.599992 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33600_c0_g1_i1 11.93428598 1.143301217 22.72527074 19.87688844 4.313020027 5.61E-06 4.74E-05 Up 0.3118251 0 0.2431105 3.056799 2.495763 3.40281 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF02046.14 Cytochrome c oxidase subunit VIa TRINITY_DN33605_c0_g1_i1 5.559525738 0.738117137 10.38093434 14.06407441 3.813942704 0.007608838 0.030286564 Up 4.50E-69 5.85E-82 0.4696597 0.7633521 2.262494 1.590236 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33608_c0_g1_i1 7.819277264 0 15.63855453 Inf Inf 5.39E-06 4.57E-05 Up 0 0 0 2.054016 1.131423 1.723185 EXB37746.1 Pleiotropic drug resistance protein 2 [Morus notabilis] Q2PCF1|PDR2_NICPL Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia OX=4092 GN=PDR2 PE=2 SV=1 -- -- -- -- -- -- KOG0065 "Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG0842 (ABC) transporter Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887); -- -- TRINITY_DN33609_c0_g1_i1 5.452505004 10.90501001 0 0 #NAME? 0.000555263 0.003100637 Down 2.04145 0.9923367 1.270699 0 7.50E-83 0 PIN03064.1 Aspartyl protease [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33610_c0_g1_i1 6.213786316 12.42757263 0 0 #NAME? 0.000158899 0.001010144 Down 1.802492 1.753859 2.763831 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33612_c0_g1_i1 11.77053584 0.325611563 23.21546011 71.29802119 6.155790131 1.07E-07 1.17E-06 Up 0.09729577 0 0 1.092297 1.399249 2.390417 AAX29381.1 "ribosomal protein L13, partial [synthetic construct]" P41127|RL131_ARATH 60S ribosomal protein L13-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13B PE=1 SV=1 bvg:104893113 K02873 "RP-L13e, RPL13" large subunit ribosomal protein L13e ko03010 Ribosome KOG3295 60S Ribosomal protein L13 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG4352 cytoplasmic translation Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cell wall (GO:0005618);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to cytokinin (GO:0009735);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: polysomal ribosome (GO:0042788); PF01294.17 Ribosomal protein L13e TRINITY_DN33615_c0_g1_i1 7.271533474 14.54306695 0 0 #NAME? 4.11E-05 0.00029617 Down 3.341943 1.094607 4.343124 0 0 0 KYP68421.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 pda:103697909 K01209 abfA alpha-N-arabinofuranosidase ko00520 Amino sugar and nucleotide sugar metabolism KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN33616_c0_g1_i1 51.66521693 1.428347119 101.9020867 71.3426627 6.156693157 4.60E-30 2.58E-28 Up 5.69E-87 0.3892938 0.1519719 10.42665 9.340012 10.56789 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33618_c0_g1_i1 9.725535442 4.211669233 15.23940165 3.618375709 1.855342216 0.030206215 0.094743731 Up 0.4422414 1.045448 0.3278627 1.328032 1.876198 1.800011 XP_018451066.1 PREDICTED: uncharacterized protein LOC108822474 [Raphanus sativus] -- -- -- -- -- -- -- -- KOG0234 "Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase" [G] METABOLISM Carbohydrate transport and metabolism G COG0406 Phosphoglycerate mutase -- -- -- TRINITY_DN33621_c0_g1_i1 11.40180159 20.14491703 2.658686153 0.131978015 -2.921630475 0.0014499 0.007255278 Down 2.115803 1.593882 0.6860514 0.09211656 0.09129081 0.3718628 XP_019451799.1 PREDICTED: uncharacterized protein LOC109353895 [Lupinus angustifolius] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZSSE Endonuclease/Exonuclease/phosphatase family -- -- -- TRINITY_DN33622_c0_g1_i1 2.84705195 5.6941039 0 0 #NAME? 0.024523466 0.079970811 Down 1.414405 1.350981 0.7968302 0 0 0 AAX29470.1 "ubiquinol-cytochrome c reductase binding protein, partial [synthetic construct]" O74533|QCR7_SCHPO Cytochrome b-c1 complex subunit 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=qcr7 PE=3 SV=1 hir:HETIRDRAFT_141404 K00417 "QCR7, UQCRB" ubiquinol-cytochrome c reductase subunit 7 ko00190 Oxidative phosphorylation KOG3440 "Ubiquinol cytochrome c reductase, subunit QCR7" [C] METABOLISM Energy production and conversion C ENOG4111V1G "component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain (By similarity)" "Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial respiratory chain complex III (GO:0005750);|Biological Process: mitochondrial electron transport, ubiquinol to cytochrome c (GO:0006122);|Biological Process: aerobic respiration (GO:0009060);|Biological Process: mitochondrial respiratory chain complex III assembly (GO:0034551);" PF02271.15 Ubiquinol-cytochrome C reductase complex 14kD subunit TRINITY_DN33625_c0_g1_i1 120.4593635 163.7415122 77.17721493 0.471335667 -1.085173236 9.06E-06 7.39E-05 Down 17.78438 16.91328 12.06804 6.327001 5.987804 5.505007 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33626_c0_g1_i1 3.996334708 7.992669417 0 0 #NAME? 0.004590351 0.019711458 Down 1.352971 2.03479 1.078359 0 0 0 KYP62512.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33627_c0_g1_i1 3.011197684 6.022395368 0 0 #NAME? 0.016540134 0.057843321 Down 1.070865 0.3464718 1.928503 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33630_c0_g1_i1 17.1097806 3.575526799 30.6440344 8.570494957 3.099378524 8.80E-06 7.19E-05 Up 0.6676848 0.1280083 0.3031565 2.807839 1.593095 3.232094 AOQ11899.1 RpS9-RA [synthetic construct] P52810|RS9_PODAS 40S ribosomal protein S9 OS=Podospora anserina OX=5145 GN=RPS9 PE=3 SV=1 cim:CIMG_00377 K02997 "RP-S9e, RPS9" small subunit ribosomal protein S9e ko03010 Ribosome KOG3301 Ribosomal protein S4 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0522 "One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: small ribosomal subunit (GO:0015935);|Molecular Function: rRNA binding (GO:0019843); "PF01479.24,PF00163.18" S4 domain|Ribosomal protein S4/S9 N-terminal domain TRINITY_DN33633_c0_g1_i1 10.66185848 19.51254077 1.811176178 0.092821135 -3.429402854 0.005432162 0.022753725 Down 0.6195408 2.401893 1.212567 0 0.3047012 0 PNX86534.1 "Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN33637_c0_g1_i1 19.25824777 32.95711088 5.55938467 0.168685438 -2.567592662 5.80E-05 0.000404214 Down 1.554965 1.314126 2.292373 0.2845585 0.2275204 0.1905065 XP_012844294.1 PREDICTED: uncharacterized protein LOC105964305 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33638_c0_g1_i1 11.99279388 21.80690241 2.178685362 0.099908062 -3.323255087 0.000210983 0.00130586 Down 1.078361 1.345922 0.8823886 0.04768516 0.2372535 0 XP_010689378.1 PREDICTED: uncharacterized protein LOC104903087 [Beta vulgaris subsp. vulgaris] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN33642_c0_g1_i1 7.202584087 14.40516817 0 0 #NAME? 4.04E-05 0.000291613 Down 1.220889 2.660877 1.895354 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33644_c0_g1_i1 3.070487371 6.140974742 0 0 #NAME? 0.015682028 0.055397221 Down 0.9849327 0.9443234 1.820051 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3365_c0_g1_i1 10.422734 3.755515214 17.08995279 4.550628026 2.186065663 0.010911032 0.040885294 Up 0.6740721 0 0.3923726 1.147454 1.444415 1.370405 XP_012841431.1 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Erythranthe guttata] Q6JN46|EIX2_SOLLC Receptor-like protein EIX2 OS=Solanum lycopersicum OX=4081 GN=EIX2 PE=1 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); -- -- TRINITY_DN33660_c0_g1_i1 19.14596877 37.92970231 0.362235236 0.009550173 -6.710257351 1.83E-11 3.16E-10 Down 4.11316 5.400043 5.344 0 0.1137072 0 SJX44916.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" P34788|RS18_ARATH 40S ribosomal protein S18 OS=Arabidopsis thaliana OX=3702 GN=RPS18A PE=1 SV=1 psq:PUNSTDRAFT_98447 K02964 "RP-S18e, RPS18" small subunit ribosomal protein S18e ko03010 Ribosome KOG3311 Ribosomal protein S18 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0099 "Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits" Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cell wall (GO:0005618);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Cellular Component: ribosome (GO:0005840);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translational initiation (GO:0006413);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: membrane (GO:0016020);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF00416.21 Ribosomal protein S13/S18 TRINITY_DN33664_c0_g1_i1 8.428137726 16.85627545 0 0 #NAME? 0.000187005 0.00117102 Down 2.196012 2.112918 6.083232 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33665_c0_g1_i1 5.773115867 11.54623173 0 0 #NAME? 0.018506301 0.063578032 Down 2.914503 1.640277 0 0 0 0 NP_001241196.1 uncharacterized protein LOC100804784 [Glycine max] Q9SAG8|DNAJ8_ARATH "Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ8 PE=2 SV=1" -- -- -- -- -- -- KOG0715 Molecular chaperone (DnaJ superfamily) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0484 "ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)" Cellular Component: nucleus (GO:0005634);|Biological Process: response to light stimulus (GO:0009416);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570); PF00226.30 DnaJ domain TRINITY_DN33666_c0_g1_i1 8.913750663 1.230195228 16.5973061 13.49160338 3.753989907 0.002734833 0.01262892 Up 0 0 0.4705092 3.195355 1.574393 0.8866801 XP_011082490.1 monothiol glutaredoxin-S2-like [Sesamum indicum] Q9LYC8|GRXS6_ARATH Monothiol glutaredoxin-S6 OS=Arabidopsis thaliana OX=3702 GN=GRXS6 PE=3 SV=1 sind:105165241 K03676 "grxC, GLRX, GLRX2" glutaredoxin 3 -- -- KOG1752 Glutaredoxin and related proteins [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0695 Glutaredoxin "Biological Process: negative regulation of transcription by RNA polymerase II (GO:0000122);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: electron transfer activity (GO:0009055);|Molecular Function: protein disulfide oxidoreductase activity (GO:0015035);|Biological Process: cell redox homeostasis (GO:0045454);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);" PF00462.23 Glutaredoxin TRINITY_DN33668_c0_g1_i1 5.021305766 0 10.04261153 Inf Inf 0.000473071 0.002689238 Up 0 0 0 1.978731 0.6450241 1.270655 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33676_c0_g1_i1 23.61882833 2.286602434 44.95105422 19.65844764 4.297077496 3.91E-08 4.57E-07 Up 0.1754063 0 0.132321 1.762142 1.121266 2.541122 AOQ09644.1 RpL3-RA [synthetic construct] P36584|RL3B_SCHPO 60S ribosomal protein L3-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl302 PE=3 SV=2 fme:FOMMEDRAFT_21857 K02925 "RP-L3e, RPL3" large subunit ribosomal protein L3e ko03010 Ribosome KOG0746 60S ribosomal protein L3 and related proteins [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0087 "One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity)" Biological Process: ribosomal large subunit assembly (GO:0000027);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF00297.21 Ribosomal protein L3 TRINITY_DN3367_c0_g1_i1 4.463908672 8.927817344 0 0 #NAME? 0.013110077 0.047784305 Down 2.351711 2.246463 0 0 0 0 XP_003531482.1 "phosphoglycerate kinase, cytosolic [Glycine max]" Q42961|PGKH_TOBAC "Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum OX=4097 PE=2 SV=1" gmx:100801951 K00927 "PGK, pgk" phosphoglycerate kinase ko00710|ko00010 Carbon fixation in photosynthetic organisms|Glycolysis / Gluconeogenesis KOG1367 3-phosphoglycerate kinase [G] METABOLISM Carbohydrate transport and metabolism G COG0126 phosphoglycerate kinase Molecular Function: phosphoglycerate kinase activity (GO:0004618);|Molecular Function: ATP binding (GO:0005524);|Biological Process: glycolytic process (GO:0006096);|Cellular Component: chloroplast (GO:0009507);|Biological Process: reductive pentose-phosphate cycle (GO:0019253); PF00162.18 Phosphoglycerate kinase TRINITY_DN33683_c0_g1_i1 13.20201497 0.246039046 26.1579909 106.3164216 6.732220642 1.14E-08 1.43E-07 Up 0 0 0.1058373 1.642908 1.966016 2.983727 ACL88444.1 "Qm-PC, partial [synthetic construct]" Q9P769|RL10B_SCHPO 60S ribosomal protein L10-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl1002 PE=3 SV=1 ang:ANI_1_628104 K02866 "RP-L10e, RPL10" large subunit ribosomal protein L10e ko03010 Ribosome KOG0857 60s ribosomal protein L10 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0197 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs (By similarity) Biological Process: ribosomal large subunit assembly (GO:0000027);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Biological Process: ribosome biogenesis (GO:0042254); PF00252.17 Ribosomal protein L16p/L10e TRINITY_DN33685_c0_g1_i1 4.591368344 9.182736688 0 0 #NAME? 0.002128808 0.010161197 Down 2.292939 1.098535 0.6047067 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33689_c0_g1_i1 21.51105624 0 43.02211249 Inf Inf 1.14E-14 2.57E-13 Up 0 0 0 6.953938 4.462959 9.082089 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33690_c0_g1_i1 20.95635583 38.18278233 3.729929331 0.097686159 -3.355702032 1.33E-06 1.25E-05 Down 6.081442 7.012341 3.282327 0.8722572 0 0.4206753 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33700_c0_g1_i1 3.876975933 7.753951865 0 0 #NAME? 0.005092221 0.02151044 Down 0.5095118 1.484779 1.043368 0 0 0 SJX46354.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" -- -- -- -- -- -- -- -- KOG3780 Thioredoxin binding protein TBP-2/VDUP1 [R] POORLY CHARACTERIZED General function prediction only S ENOG41102NY Arrestin domain containing -- PF00339.28 "Arrestin (or S-antigen), N-terminal domain" TRINITY_DN33701_c0_g1_i1 6.67671869 13.35343738 0 0 #NAME? 0.000712009 0.003860976 Down 3.67353 0.60434 3.432036 0 0 0 XP_020692385.1 uncharacterized protein LOC110106744 [Dendrobium catenatum] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN33702_c0_g1_i1 9.98048521 19.96097042 0 0 #NAME? 6.70E-07 6.60E-06 Down 1.896777 4.099381 3.72802 0 0 0 AIC49646.1 "RPS15A, partial [synthetic construct]" P0CU35|RS22B_CANAL 40S ribosomal protein S22-B OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=RPS22B PE=3 SV=1 gsl:Gasu_18680 K02957 "RP-S15Ae, RPS15A" small subunit ribosomal protein S15Ae ko03010 Ribosome KOG1754 40S ribosomal protein S15/S22 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " U ENOG410Z6SH ADP-ribosylation factor-like 6 interacting protein 1 Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF00410.18 Ribosomal protein S8 TRINITY_DN33707_c0_g1_i1 17.41961441 34.47699359 0.362235236 0.010506578 -6.572563279 1.74E-10 2.70E-09 Down 3.168716 3.977156 5.388055 0 0.1298027 0 SJX44896.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" Q02753|RL21A_YEAST 60S ribosomal protein L21-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL21A PE=1 SV=1 vpo:Kpol_1024p35 K02889 "RP-L21e, RPL21" large subunit ribosomal protein L21e ko03010 Ribosome KOG1732 60S ribosomal protein L21 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2139 (ribosomal) protein Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF01157.17 Ribosomal protein L21e TRINITY_DN33710_c0_g1_i1 15.63714106 31.27428212 0 0 #NAME? 2.02E-10 3.12E-09 Down 4.113438 2.292264 3.458265 0 9.75E-111 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33723_c0_g1_i1 7.590489523 14.81346986 0.367509184 0.024809122 -5.332985498 0.000164697 0.001042545 Down 2.413362 1.014212 1.822408 0.117811 0 0 AIC54322.1 "EEF2, partial [synthetic construct]" Q874B9|EF2_PICPA Elongation factor 2 OS=Komagataella pastoris OX=4922 GN=EFT1 PE=3 SV=1 -- -- -- -- -- -- KOG0469 Elongation factor 2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0480 "Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)" Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737); "PF00009.26,PF01926.22" Elongation factor Tu GTP binding domain|50S ribosome-binding GTPase TRINITY_DN33726_c0_g1_i1 23.48608108 35.41522431 11.55693786 0.326326829 -1.61561049 0.00327065 0.014708075 Down 4.854119 8.112429 5.971946 2.117328 1.055921 1.893021 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33735_c0_g1_i1 9.123174974 0.738117137 17.50823281 23.72012779 4.568039877 0.027977668 0.089103367 Up 0 0 0.2945846 1.710659 3.940037 0.3170699 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33736_c0_g1_i1 13.05683128 26.11366255 0 0 #NAME? 9.91E-06 8.02E-05 Down 7.841642 3.808648 2.647047 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33738_c0_g1_i1 22.64490273 33.30524699 11.98455848 0.359839952 -1.474572721 0.033083033 0.10206879 Down 4.227756 4.0446 1.400068 1.001011 0.5382891 1.289952 KCW84880.1 hypothetical protein EUGRSUZ_B01700 [Eucalyptus grandis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111EYK Plant protein of unknown function (DUF868) -- -- -- TRINITY_DN33739_c0_g1_i1 12.51267383 24.25377098 0.771576693 0.031812649 -4.974255699 1.13E-06 1.08E-05 Down 2.857965 3.809315 3.479427 0 0 0.2807604 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3373_c0_g1_i1 7.180094275 1.288924365 13.07126419 10.14121895 3.342159165 0.002634554 0.012218052 Up 0.3351927 0.163813 0 1.379335 1.052569 1.783955 XP_009614142.2 "PREDICTED: mannan endo-1,4-beta-mannosidase 6 isoform X1 [Nicotiana tomentosiformis]" Q9LZV3|MAN6_ARATH "Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis thaliana OX=3702 GN=MAN6 PE=2 SV=1" sly:101261972 K19355 MAN "mannan endo-1,4-beta-mannosidase" ko00051 Fructose and mannose metabolism -- -- -- -- -- G COG3934 "Mannan endo-1,4-beta-mannosidase" "Cellular Component: extracellular region (GO:0005576);|Biological Process: seed germination (GO:0009845);|Molecular Function: mannan endo-1,4-beta-mannosidase activity (GO:0016985);|Biological Process: mannan catabolic process (GO:0046355);" -- -- TRINITY_DN33740_c0_g1_i1 20.03952604 9.78143107 30.29762101 3.097463018 1.631087058 0.012600048 0.0461551 Up 3.404397 1.106339 0.9040676 5.468299 2.278685 5.681044 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33741_c0_g1_i1 4.815583167 9.631166334 0 0 #NAME? 0.019855617 0.067407524 Down 3.484465 0 1.92841 0 0 0 GAU38950.1 hypothetical protein TSUD_363890 [Trifolium subterraneum] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111K5V Reverse transcriptase (RNA-dependent DNA polymerase) -- -- -- TRINITY_DN33746_c0_g1_i1 6.003312231 12.00662446 0 0 #NAME? 0.001457439 0.007285268 Down 3.776098 1.645305 0.968567 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33747_c0_g1_i1 10.3791272 20.7582544 0 0 #NAME? 4.73E-07 4.76E-06 Down 5.633853 4.216667 3.479707 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33750_c0_g1_i1 14.45481557 28.90963115 0 0 #NAME? 1.20E-09 1.69E-08 Down 3.7828 6.080905 4.13712 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33757_c0_g1_i1 3.689146056 0 7.378292113 Inf Inf 0.003893204 0.017074804 Up 0 0 0 0.445547 1.560751 0.6835814 PLW19046.1 hypothetical protein PCASD_13408 [Puccinia coronata var. avenae f. sp. avenae] O74173|EF1B_SCHPO Elongation factor 1-beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tef5 PE=2 SV=1 pgr:PGTG_00332 K03232 EEF1B elongation factor 1-beta -- -- KOG1668 Elongation factor 1 beta/delta chain [K] INFORMATION STORAGE AND PROCESSING Transcription J COG2092 "Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA (By similarity)" Biological Process: cytoplasmic translational elongation (GO:0002182);|Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: guanyl-nucleotide exchange factor activity (GO:0005085);|Cellular Component: cytosol (GO:0005829);|Cellular Component: eukaryotic translation elongation factor 1 complex (GO:0005853); "PF10587.8,PF00736.18" Eukaryotic elongation factor 1 beta central acidic region|EF-1 guanine nucleotide exchange domain TRINITY_DN33761_c0_g1_i1 5.880960954 10.99034521 0.771576693 0.070204955 -3.832283327 0.005178695 0.021828998 Down 1.070338 1.544426 1.304236 0 0 0.2562908 PIN02059.1 Triacylglycerol lipase [Handroanthus impetiginosus] Q9FVV1|GDL28_ARATH GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana OX=3702 GN=At1g71250 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG4110AT7 GDSL esterase lipase Cellular Component: extracellular region (GO:0005576);|Biological Process: lipid catabolic process (GO:0016042);|Molecular Function: lipase activity (GO:0016298); -- -- TRINITY_DN33762_c0_g1_i1 5.745596579 0 11.49119316 Inf Inf 0.000145653 0.000934375 Up 0 0 0 0.6841895 2.043239 1.458837 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33769_c0_g1_i1 28.68904633 18.72305082 38.65504185 2.064569617 1.045841067 0.038828384 0.115857282 Up 1.572537 0.8590378 2.28165 2.273211 2.889353 2.819753 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33774_c0_g1_i1 13.24633517 22.03053927 4.462131066 0.20254298 -2.303700014 0.003319591 0.014898776 Down 3.836253 6.699571 2.980957 0.7641495 0.7716329 0.7845403 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33783_c0_g1_i1 9.434538423 18.86907685 0 0 #NAME? 1.78E-06 1.64E-05 Down 3.201067 5.272833 3.012427 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33786_c0_g1_i1 6.333924494 12.66784899 0 0 #NAME? 0.000142839 0.00091736 Down 3.25297 0.8988382 2.550884 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33788_c0_g1_i1 8.152484365 1.248358704 15.05661003 12.06112472 3.592292542 0.003157545 0.014271674 Up 0 0.669575 0 3.044496 2.364114 0.6814424 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41128HC NA -- -- -- TRINITY_DN33790_c0_g1_i1 4.64600845 8.556998532 0.735018369 0.085896751 -3.541252633 0.02512541 0.081529611 Down 1.663894 1.860156 0.5723465 0.2431797 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33792_c0_g1_i1 7.307658986 14.61531797 0 0 #NAME? 3.39E-05 0.00024888 Down 3.000547 0.8198895 2.647246 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33796_c0_g1_i1 4.88373574 9.76747148 0 0 #NAME? 0.001174071 0.006015871 Down 1.167512 2.568596 1.990061 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33798_c0_g1_i1 856.8744232 1368.656823 345.0920238 0.252139191 -1.987707716 6.01E-79 1.19E-76 Down 113.1675 113.7806 116.0962 21.31595 25.9518 22.48468 CAI77793.1 kunitz trypsin inhibitor [Populus tremula] P80691|LSPI_CARPA Latex serine proteinase inhibitor OS=Carica papaya OX=3649 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YHN1 trypsin and protease inhibitor family protein Kunitz family protein Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867);|Cellular Component: extracellular space (GO:0005615); PF00197.17 Trypsin and protease inhibitor TRINITY_DN33799_c0_g1_i1 4.578042958 0 9.156085916 Inf Inf 0.043963253 0.127883624 Up 0 0 0 3.484598 1.033777 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN337_c0_g1_i1 12.46049262 0 24.92098525 Inf Inf 2.27E-05 0.000171636 Up 0 0 0 2.772292 3.349486 0.5933146 O24058.1 RecName: Full=Metallothionein-like protein type 2 O24058|MT2_MALDO Metallothionein-like protein type 2 OS=Malus domestica OX=3750 GN=MT1 PE=3 SV=1 -- -- -- -- -- -- KOG4738 Predicted metallothionein [P] METABOLISM Inorganic ion transport and metabolism S ENOG410Z616 metallothionein-like protein Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN33806_c0_g1_i1 6.712987345 1.601014041 11.82496065 7.385919392 2.884777517 0.008722682 0.034010368 Up 0.4866424 0.2267726 0 1.786106 1.55868 0.9277192 AOQ13385.1 RpL23A-PA [synthetic construct] O22644|RL23A_FRIAG 60S ribosomal protein L23A OS=Fritillaria agrestis OX=64177 GN=RPL23A PE=2 SV=1 atr:18437672 K02893 "RP-L23Ae, RPL23A" large subunit ribosomal protein L23Ae ko03010 Ribosome KOG1751 60s ribosomal protein L23 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0089 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Molecular Function: rRNA binding (GO:0019843); "PF03939.12,PF00276.19" "Ribosomal protein L23, N-terminal domain|Ribosomal protein L23" TRINITY_DN33810_c0_g1_i1 2.471232438 4.942464876 0 0 #NAME? 0.043884682 0.12774708 Down 0.9695181 1.281049 0.2465113 0 0 0 AAV38229.1 "lymphocyte-specific protein tyrosine kinase, partial [synthetic construct]" Q9ASQ5|CRCK3_ARATH Calmodulin-binding receptor-like cytoplasmic kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRCK3 PE=2 SV=1 -- -- -- -- -- -- KOG0197 Tyrosine kinases [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- "PF07714.16,PF00069.24" Protein tyrosine kinase|Protein kinase domain TRINITY_DN33813_c0_g1_i1 13.31875003 20.36419282 6.273307244 0.308055777 -1.698736503 0.021182412 0.070972337 Down 2.043647 2.567041 5.230498 0.6155687 1.230361 0.5949015 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33817_c0_g1_i1 17.77912802 35.19074686 0.367509184 0.010443347 -6.581272018 1.02E-07 1.12E-06 Down 3.422796 4.574685 8.088761 0.1894536 0 0 BAI47200.1 "ribosomal protein, large, P1, partial [synthetic construct]" P29763|RLA1_CHLRE 60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1 csl:COCSUDRAFT_53031 K02942 "RP-LP1, RPLP1" large subunit ribosomal protein LP1 ko03010 Ribosome KOG1762 60s acidic ribosomal protein P1 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2058 Ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translational elongation (GO:0006414); PF00428.18 60s Acidic ribosomal protein TRINITY_DN33822_c0_g1_i1 14.59162916 0.492078091 28.69118023 58.30615251 5.865576221 8.56E-09 1.09E-07 Up 0 0 0.2259779 2.637329 3.130064 3.711195 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33828_c0_g1_i1 22.33329841 2.391659921 42.27493689 17.67598166 4.143718434 4.71E-10 6.97E-09 Up 0.09567433 0.1869224 0.07217283 1.519629 1.986997 1.594747 BAJ85408.1 predicted protein [Hordeum vulgare subsp. vulgare] Q9XF97|RL4_PRUAR 60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1 pmum:103323672 K02930 "RP-L4e, RPL4" large subunit ribosomal protein L4e ko03010 Ribosome KOG1475 Ribosomal protein RPL1/RPL2/RL4L4 [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification J COG0088 "One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); "PF00573.21,PF14374.5" Ribosomal protein L4/L1 family|60S ribosomal protein L4 C-terminal domain TRINITY_DN33829_c0_g1_i1 9.652598236 0 19.30519647 Inf Inf 2.80E-07 2.91E-06 Up 0 0 0 2.201355 3.657169 2.971438 -- -- -- -- -- -- -- -- -- -- KOG0202 Ca2+ transporting ATPase [P] METABOLISM Inorganic ion transport and metabolism P COG0474 P-type atpase -- -- -- TRINITY_DN3382_c0_g1_i1 7.216885376 14.43377075 0 0 #NAME? 3.99E-05 0.000288239 Down 2.059583 1.621605 2.033315 4.36E-46 0 3.08E-77 XP_015084884.1 "PREDICTED: copper-transporting ATPase PAA2, chloroplastic [Solanum pennellii]" B9DFX7|HMA8_ARATH "Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA2 PE=1 SV=1" spen:107028366 K01533 copB Cu2+-exporting ATPase -- -- -- -- -- -- -- P COG2217 p-type ATPase Molecular Function: copper-exporting ATPase activity (GO:0004008);|Molecular Function: copper ion transmembrane transporter activity (GO:0005375);|Molecular Function: ATP binding (GO:0005524);|Biological Process: copper ion transport (GO:0006825);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN33831_c0_g1_i1 4.054643553 8.109287107 0 0 #NAME? 0.003410613 0.015248496 Down 0.6688652 0.6341294 2.143756 0 0 0 XP_012857635.1 PREDICTED: putative late blight resistance protein homolog R1A-4 [Erythranthe guttata] Q6L400|R1B16_SOLDE Putative late blight resistance protein homolog R1B-16 OS=Solanum demissum OX=50514 GN=R1B-16 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Molecular Function: ADP binding (GO:0043531); -- -- TRINITY_DN33837_c0_g1_i1 5.250473514 10.50094703 0 0 #NAME? 0.000611613 0.003373104 Down 1.136848 1.505553 2.691936 0 0 0 XP_022860306.1 uncharacterized protein LOC111380876 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- PF03732.16 Retrotransposon gag protein TRINITY_DN33842_c0_g1_i1 19.98669165 39.97338331 0 0 #NAME? 3.49E-13 7.00E-12 Down 8.942344 6.024542 8.79227 0 0 0 SJX44628.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" Q43292|RL372_ARATH 60S ribosomal protein L37-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37B PE=3 SV=2 tcc:TCM_037139 K02922 "RP-L37e, RPL37" large subunit ribosomal protein L37e ko03010 Ribosome KOG3475 60S ribosomal protein L37 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2126 Binds to the 23S rRNA (By similarity) Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Molecular Function: metal ion binding (GO:0046872); PF01907.18 Ribosomal protein L37e TRINITY_DN33848_c0_g1_i1 10.22520172 20.45040343 0 0 #NAME? 5.73E-06 4.84E-05 Down 2.740717 0.7594182 2.174492 0 0 0 XP_021692914.1 uncharacterized protein LOC110673970 isoform X1 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33854_c0_g1_i1 2.545383964 5.090767929 0 0 #NAME? 0.034642942 0.105909688 Down 1.040656 0.6772753 1.339985 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF01657.16 Salt stress response/antifungal TRINITY_DN33866_c0_g1_i1 18.72565837 8.150255647 29.3010611 3.59510945 1.846035693 0.002128337 0.010161085 Up 0.614506 2.396834 0.4826713 4.549208 2.776319 2.876016 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3386_c0_g1_i1 19.70735941 8.61796987 30.79674895 3.573550315 1.837358102 0.002925594 0.013372417 Up 0 2.618603 2.127473 4.300195 4.983131 4.314502 XP_024196437.1 uncharacterized protein LOC112199691 [Rosa chinensis] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN3386_c0_g2_i1 54.47409736 30.38742422 78.56077049 2.585305352 1.370334688 9.61E-05 0.000639005 Up 0.6434304 0.7181524 0.7013607 1.500257 1.526239 1.247049 PON81528.1 "Zinc knuckle CX2CX4HX4C, partial [Trema orientale]" -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- PF14111.5 Domain of unknown function (DUF4283) TRINITY_DN33870_c0_g1_i1 4.438984253 8.877968506 0 0 #NAME? 0.002423693 0.011362045 Down 2.412238 1.328398 1.372101 0 0 0 PON58179.1 hypothetical protein PanWU01x14_167780 [Parasponia andersonii] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN33875_c0_g1_i1 6.561159712 12.39784895 0.724470471 0.058435175 -4.097019135 0.00240414 0.01128437 Down 1.415133 2.316322 1.271602 1.46E-27 0.2002625 1.79E-97 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3387_c0_g1_i1 5.094848968 10.18969794 0 0 #NAME? 0.010724002 0.040297566 Down 1.667008 1.815815 0 0 0 0 XP_025982257.1 uncharacterized protein LOC100813910 [Glycine max] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YE8S expressed protein -- PF04862.11 Protein of unknown function (DUF642) TRINITY_DN33884_c0_g1_i1 8.615139439 13.75818376 3.47209512 0.252365805 -1.986411653 0.043908978 0.127783065 Down 1.820378 1.76548 4.274419 0 0 1.720137 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33886_c0_g1_i1 4.050422256 8.100844512 0 0 #NAME? 0.004382648 0.018941921 Down 2.813922 0.6724877 1.077914 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33888_c0_g1_i1 14.35567331 25.03625478 3.675091843 0.146790799 -2.768166553 0.004442973 0.019163804 Down 2.699681 3.862987 7.364508 1.689869 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3388_c0_g1_i1 30.93170383 42.36768831 19.49571936 0.460155372 -1.119807025 0.049949248 0.141629472 Down 6.275404 10.87162 9.981394 0 4.495137 5.708624 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33890_c0_g1_i1 3.601012226 0 7.202024451 Inf Inf 0.021406993 0.071550521 Up 0 0 0 1.33078 0 2.359852 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XSMG Haemolymph juvenile hormone binding protein (JHBP) -- PF06585.10 Haemolymph juvenile hormone binding protein (JHBP) TRINITY_DN33895_c0_g1_i1 11.82862683 22.88567697 0.771576693 0.033714392 -4.890491593 0.001765341 0.008623992 Down 1.887843 6.079796 2.167036 0 0 0.3405554 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33899_c0_g1_i1 98.62384266 193.9534672 3.294218128 0.01698458 -5.879630669 8.57E-50 9.27E-48 Down 18.68555 17.85146 17.15513 0.140339 0.4839707 0.07183004 CDP10159.1 unnamed protein product [Coffea canephora] Q9FG35|TBR_ARATH Protein trichome birefringence OS=Arabidopsis thaliana OX=3702 GN=TBR PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YC5G Pfam:DUF231 Cellular Component: endosome (GO:0005768);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Biological Process: plant-type cell wall modification (GO:0009827);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: O-acetyltransferase activity (GO:0016413);|Biological Process: cellulose biosynthetic process (GO:0030244);|Biological Process: pectin biosynthetic process (GO:0045489); -- -- TRINITY_DN33901_c0_g1_i1 36.86824154 2.346452671 71.39003041 30.42466242 4.92716935 4.38E-18 1.27E-16 Up 0 0.2391828 0.749914 7.987336 9.449071 6.19068 EYU45750.1 "hypothetical protein MIMGU_mgv1a021241mg, partial [Erythranthe guttata]" Q39065|COPT1_ARATH Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2 -- -- -- -- -- -- KOG3386 Copper transporter [P] METABOLISM Inorganic ion transport and metabolism P ENOG4111I8D Solute carrier family 31 copper transporters member Molecular Function: copper ion transmembrane transporter activity (GO:0005375);|Biological Process: copper ion transport (GO:0006825);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: pollen sperm cell differentiation (GO:0048235);|Biological Process: root development (GO:0048364); PF04145.14 Ctr copper transporter family TRINITY_DN33904_c0_g1_i1 2.528201331 5.056402661 0 0 #NAME? 0.038276043 0.114502728 Down 0.8209999 0.7879965 0.4944918 0 0 0 ABW03335.1 "GTPase, IMAP family member 7, partial [synthetic construct]" F4HT21|IAN9_ARATH Immune-associated nucleotide-binding protein 9 OS=Arabidopsis thaliana OX=3702 GN=IAN9 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111GYZ "gTPase, IMAP family member" Molecular Function: GTP binding (GO:0005525); PF04548.15 AIG1 family TRINITY_DN33908_c0_g1_i1 2.724032427 5.448064855 0 0 #NAME? 0.029712676 0.093494211 Down 1.110711 1.08296 0.4422227 0 0 0 KRH38396.1 hypothetical protein GLYMA_09G133500 [Glycine max] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z5MF NA -- PF14111.5 Domain of unknown function (DUF4283) TRINITY_DN33909_c0_g1_i1 5.994213082 11.98842616 0 0 #NAME? 0.03367596 0.103602363 Down 0.9463003 4.238811 0.4837516 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33918_c0_g1_i1 12.42289335 4.160699294 20.68508741 4.971541068 2.313693125 0.011809334 0.043736113 Up 1.815691 0 0.7243173 2.685165 1.870931 5.501746 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33919_c0_g1_i1 13.2754309 4.565883374 21.98497842 4.815054748 2.267552202 0.002183375 0.010378006 Up 1.972488 0 0.518047 2.968714 3.076014 3.869876 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3391_c0_g1_i1 11.57877794 17.44384734 5.713708551 0.327548645 -1.610218916 0.043180446 0.126153753 Down 4.309159 2.039958 2.474972 0.6077341 0 1.76945 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33922_c0_g1_i1 7.326943562 14.65388712 0 0 #NAME? 2.84E-05 0.000211094 Down 1.20568 2.570727 3.797204 0 0 0 SJX25902.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" P0C2H7|RL27B_YEAST 60S ribosomal protein L27-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL27B PE=1 SV=1 pgr:PGTG_18076 K02901 "RP-L27e, RPL27" large subunit ribosomal protein L27e ko03010 Ribosome KOG3418 60S ribosomal protein L27 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2163 (ribosomal) protein "Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: preribosome, large subunit precursor (GO:0030687);" "PF01777.17,PF00467.28" Ribosomal L27e protein family|KOW motif TRINITY_DN33925_c0_g1_i1 10.4795431 20.95908619 0 0 #NAME? 3.66E-07 3.75E-06 Down 2.872118 2.111005 2.365634 0 0 0 AAX32502.1 ribosomal protein S10 [synthetic construct] P0DKK8|RS10A_ORYSJ 40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 PE=2 SV=1 ppp:PHYPADRAFT_213919 K02947 "RP-S10e, RPS10" small subunit ribosomal protein S10e ko03010 Ribosome KOG3344 40s ribosomal protein s10 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG5045 Ribosomal protein Biological Process: ribosomal small subunit assembly (GO:0000028);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF03501.14 Plectin/S10 domain TRINITY_DN33927_c0_g1_i1 11.91061264 3.243714843 20.57751044 6.343809932 2.665349547 0.003817605 0.016808198 Up 0.2808318 0.2686546 0.8782846 1.067954 2.692937 3.562179 ACL86568.1 "RpS25-PA, partial [synthetic construct]" Q9T029|RS254_ARATH 40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1 vcn:VOLCADRAFT_82071 K02975 "RP-S25e, RPS25" small subunit ribosomal protein S25e ko03010 Ribosome KOG1767 40S ribosomal protein S25 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG4901 Ribosomal protein S25 Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF03297.14 S25 ribosomal protein TRINITY_DN33931_c0_g1_i1 8.443840149 16.8876803 0 0 #NAME? 0.000597249 0.003307393 Down 5.35632 4.341471 0.7052261 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33934_c0_g1_i1 9.99118768 4.651218581 15.33115678 3.29615917 1.720785911 0.046166117 0.132973026 Up 0.7739636 1.143089 0.8907464 2.609703 1.491497 3.179718 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33946_c0_g1_i1 9.907243166 1.674386165 18.14010017 10.83388083 3.437478221 0.00040488 0.002343028 Up 0 0.3410894 0.2667612 1.867039 2.293598 1.534636 ACL86876.1 "RpL21-PA, partial [synthetic construct]" Q02753|RL21A_YEAST 60S ribosomal protein L21-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL21A PE=1 SV=1 ppa:PAS_chr1-4_0680 K02889 "RP-L21e, RPL21" large subunit ribosomal protein L21e ko03010 Ribosome KOG1732 60S ribosomal protein L21 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2139 (ribosomal) protein Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF01157.17 Ribosomal protein L21e TRINITY_DN3394_c0_g1_i1 25.69906961 37.21134228 14.18679695 0.381249267 -1.391193533 0.022618202 0.074892995 Down 7.006779 2.482017 5.659779 1.572364 1.187597 1.883003 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33951_c0_g1_i1 6.71262535 13.4252507 0 0 #NAME? 7.36E-05 0.000502055 Down 2.092057 1.640571 3.24523 0 0 0 ABM87499.1 "poly(A) binding protein, cytoplasmic 1, partial [synthetic construct]" Q5B630|PABP_EMENI "Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pab1 PE=2 SV=2" csl:COCSUDRAFT_46684 K13126 PABPC polyadenylate-binding protein ko03018|ko03015|ko03013 RNA degradation|mRNA surveillance pathway|RNA transport KOG0123 Polyadenylate-binding protein (RRM superfamily) [AJ] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING "RNA processing and modification |Translation, ribosomal structure and biogenesis " S ENOG410XR5X "poly(A) binding protein, cytoplasmic" Molecular Function: RNA binding (GO:0003723);|Molecular Function: mRNA 3'-UTR binding (GO:0003730);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: mRNA processing (GO:0006397);|Biological Process: mRNA export from nucleus (GO:0006406);|Biological Process: regulation of translation (GO:0006417);|Molecular Function: poly(A) binding (GO:0008143);|Molecular Function: poly(U) RNA binding (GO:0008266);|Cellular Component: cytoplasmic stress granule (GO:0010494);|Cellular Component: post-mRNA release spliceosomal complex (GO:0071014);|Cellular Component: ribonucleoprotein complex (GO:1990904); PF00658.17 "Poly-adenylate binding protein, unique domain" TRINITY_DN33954_c0_g1_i1 15.8272237 23.57242129 8.082026105 0.342859395 -1.544311039 0.021129134 0.070840889 Down 3.860597 3.271206 5.221464 1.188412 1.73849 0.5522463 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33955_c0_g1_i1 8.003955443 2.952468547 13.05544234 4.42187347 2.144657744 0.049514601 0.140591836 Up 0 0 1.736164 1.588505 2.119968 2.670853 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33965_c0_g1_i1 4.219770129 8.439540258 0 0 #NAME? 0.002937353 0.013417564 Down 0.8997578 1.749212 2.117597 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33966_c0_g1_i1 6.855838373 1.209351847 12.5023249 10.33803762 3.369890453 0.003479976 0.015520393 Up 0.1900884 0.09204234 0.07277464 1.074837 1.285479 0.4303978 PIN10176.1 hypothetical protein CDL12_17238 [Handroanthus impetiginosus] Q70II3|EF110_ARATH Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- K ENOG411198J AP2 ERF domain-containing transcription factor "Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);" PF00847.19 AP2 domain TRINITY_DN33967_c0_g1_i1 6.388222855 1.92042521 10.8560205 5.652925425 2.498997665 0.034218272 0.104865652 Up 0 0.6244899 0.494292 2.168825 0.7216179 2.113249 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33968_c0_g1_i1 7.850741298 0 15.7014826 Inf Inf 2.91E-05 0.000216168 Up 0 0 0 3.490118 0.8656701 2.754063 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00031.20 Cystatin domain TRINITY_DN33971_c0_g1_i1 3.937824424 7.875648847 0 0 #NAME? 0.004828542 0.020590138 Down 2.329157 0.5183363 1.384325 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33972_c0_g1_i1 32.33355325 64.66710651 0 0 #NAME? 8.23E-21 2.84E-19 Down 3.634532 4.092058 3.548499 0 0 0 XP_011084580.1 caffeic acid 3-O-methyltransferase [Sesamum indicum] Q9XGW0|COMT1_OCIBA Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum OX=39350 GN=COMT1 PE=2 SV=1 sind:105166793 K13066 "E2.1.1.68, COMT" caffeic acid 3-O-methyltransferase ko00940 Phenylpropanoid biosynthesis KOG3178 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS7T o-methyltransferase Biological Process: lignin biosynthetic process (GO:0009809);|Molecular Function: protein dimerization activity (GO:0046983);|Molecular Function: caffeate O-methyltransferase activity (GO:0047763); "PF00891.17,PF08100.10" O-methyltransferase|Dimerisation domain TRINITY_DN33976_c0_g1_i1 9.061789514 1.143301217 16.98027781 14.85197213 3.892582608 0.000221781 0.00136358 Up 0.3335682 0 0.2630564 2.493094 2.168438 1.188889 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33988_c0_g1_i1 17.65316628 25.88379047 9.422542086 0.364032544 -1.457860665 0.024986137 0.081153101 Down 4.413526 6.168509 2.463752 1.068428 0.550903 2.273921 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33990_c0_g1_i1 6.399767033 0 12.79953407 Inf Inf 0.011174129 0.041726243 Up 0 0 0 3.8681 1.977893 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN33995_c0_g1_i1 4.420242815 8.84048563 0 0 #NAME? 0.038524397 0.115116709 Down 0.7906353 3.90266 0.6226765 0 0 0 XP_011081378.1 uncharacterized protein LOC105164425 [Sesamum indicum] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN33996_c0_g1_i1 18.97935388 37.95870777 0 0 #NAME? 1.92E-12 3.63E-11 Down 6.808857 9.603966 6.144582 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34001_c0_g1_i1 10.99710616 21.99421231 0 0 #NAME? 1.67E-07 1.78E-06 Down 1.920855 2.708677 2.275366 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34003_c0_g1_i1 13.45059541 26.90119082 0 0 #NAME? 6.65E-09 8.57E-08 Down 2.882801 3.037352 1.323583 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34004_c0_g1_i1 7.780435089 15.56087018 0 0 #NAME? 2.07E-05 0.00015791 Down 2.531996 2.455993 1.476992 0 0 0 PWA47683.1 hypothetical protein CTI12_AA343190 [Artemisia annua] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN34013_c0_g1_i1 4.424164425 0 8.84832885 Inf Inf 0.001189517 0.0060854 Up 0 0 0 0.8283646 1.447432 0.7076409 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34014_c0_g1_i1 37.67306784 6.246032229 69.10010346 11.06303985 3.467675952 8.91E-13 1.73E-11 Up 0.148761 0.4957155 0.4503514 3.111165 3.460984 3.359626 ACL86920.1 "Gapdh1-PA, partial [synthetic construct]" Q9Y796|G3P_CUTCU Glyceraldehyde-3-phosphate dehydrogenase OS=Cutaneotrichosporon curvatus OX=57679 GN=GPD PE=3 SV=1 wse:WALSEDRAFT_66127 K00134 "GAPDH, gapA" glyceraldehyde 3-phosphate dehydrogenase ko00710|ko00010 Carbon fixation in photosynthetic organisms|Glycolysis / Gluconeogenesis KOG0657 Glyceraldehyde 3-phosphate dehydrogenase [G] METABOLISM Carbohydrate transport and metabolism G COG0057 glyceraldehyde3phosphate dehydrogenase Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (GO:0004365);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: glucose metabolic process (GO:0006006);|Biological Process: glycolytic process (GO:0006096);|Molecular Function: NADP binding (GO:0050661);|Molecular Function: NAD binding (GO:0051287); "PF02800.19,PF00044.23" "Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain|Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain" TRINITY_DN34016_c0_g1_i1 28.99854291 40.70570293 17.29138289 0.42479018 -1.235177678 0.010251861 0.038853465 Down 4.120685 5.104443 4.362699 1.213434 0.9476645 2.545912 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34017_c0_g1_i1 17.21258148 30.34882025 4.07634272 0.134316349 -2.896293179 4.84E-05 0.00034405 Down 3.454048 5.843112 2.664617 0.4477583 0.4452255 0.4321593 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34023_c0_g1_i1 16.23750778 32.11278033 0.362235236 0.011280096 -6.470076881 1.13E-09 1.60E-08 Down 3.15469 5.851464 4.442876 0 0.158457 0 ABM84138.1 ribosomal protein S20 [synthetic construct] P49200|RS201_ARATH 40S ribosomal protein S20-1 OS=Arabidopsis thaliana OX=3702 GN=RPS20A PE=2 SV=2 csl:COCSUDRAFT_22962 K02969 "RP-S20e, RPS20" small subunit ribosomal protein S20e ko03010 Ribosome KOG0900 40S ribosomal protein S20 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0051 tRNA binding Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cell wall (GO:0005618);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); PF00338.21 Ribosomal protein S10p/S20e TRINITY_DN34025_c0_g1_i1 12.84271746 1.230195228 24.45523968 19.87915343 4.313184415 4.20E-06 3.63E-05 Up 0 0 0.3528283 1.76221 2.591314 1.867186 ACL91264.1 RpL18A-PA [synthetic construct] P0CX23|RL20A_YEAST 60S ribosomal protein L20-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL20A PE=1 SV=1 yli:YALI0F24123g K02882 "RP-L18Ae, RPL18A" large subunit ribosomal protein L18Ae ko03010 Ribosome KOG0829 60S ribosomal protein L18A [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2157 ribosomal protein Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF01775.16 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A TRINITY_DN34029_c0_g1_i1 4.717269212 9.434538423 0 0 #NAME? 0.001606412 0.007939878 Down 0.7827791 1.259771 0.697894 0 0 0 BAI45398.1 "thioredoxin interacting protein, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG3780 Thioredoxin binding protein TBP-2/VDUP1 [R] POORLY CHARACTERIZED General function prediction only S ENOG41102NY Arrestin domain containing -- PF02752.21 "Arrestin (or S-antigen), C-terminal domain" TRINITY_DN34030_c0_g1_i1 8.045087331 13.09808033 2.992094329 0.228437622 -2.130127821 0.029102837 0.091957755 Down 1.16549 2.855679 3.632916 0 0.6512632 0.7916166 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34031_c0_g1_i1 59.3830354 9.229065038 109.5370058 11.86870017 3.569090038 2.11E-20 7.07E-19 Up 0.4522867 0.4382068 0.2976451 3.916805 3.169608 4.32226 XP_012858265.1 PREDICTED: sister chromatid cohesion 1 protein 1 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34033_c0_g1_i1 5.778289271 0 11.55657854 Inf Inf 0.000142297 0.000914009 Up 0 0 0 0.5175608 2.029819 2.09025 AAC36740.1 thaumatin-like protein precursor Mdtl1 [Malus domestica] Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica OX=3750 GN=TL1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZJVY THN Cellular Component: extracellular region (GO:0005576); PF00314.16 Thaumatin family TRINITY_DN34034_c0_g1_i1 6.836688284 0.492078091 13.18129848 26.78700538 4.743461401 0.00636393 0.026006292 Up 0 0 0.3079899 2.529477 0.3634107 3.11565 KDQ62938.1 hypothetical protein JAAARDRAFT_28908 [Jaapia argillacea MUCL 33604] P42894|ENO_NEOFR Enolase OS=Neocallimastix frontalis OX=4757 PE=3 SV=1 pco:PHACADRAFT_248428 K01689 "ENO, eno" enolase ko03018|ko00010 RNA degradation|Glycolysis / Gluconeogenesis KOG2670 Enolase [G] METABOLISM Carbohydrate transport and metabolism G COG0148 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (By similarity) Cellular Component: phosphopyruvate hydratase complex (GO:0000015);|Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: phosphopyruvate hydratase activity (GO:0004634);|Biological Process: glycolytic process (GO:0006096); PF03952.15 "Enolase, N-terminal domain" TRINITY_DN34035_c0_g1_i1 12.51005616 2.339131177 22.68098115 9.696327152 3.277438376 9.02E-05 0.000603517 Up 0.153387 0.09828945 0.1158701 1.313097 0.8178341 1.072655 PIN12281.1 hypothetical protein CDL12_15119 [Handroanthus impetiginosus] Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKF8 Ubox domain-containing protein -- -- -- TRINITY_DN34060_c0_g1_i1 13.54232242 6.585165678 20.49947915 3.112978497 1.638295611 0.026038557 0.083958533 Up 0.5784631 0.9053694 0.9026123 2.108612 1.555508 2.306476 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34066_c0_g1_i1 27.10780827 10.90809279 43.30752374 3.970219595 1.989218806 0.000221341 0.001361245 Up 0.8539665 1.515601 0.440785 4.05843 2.560523 2.158833 XP_019438928.1 PREDICTED: uncharacterized protein LOC109344625 [Lupinus angustifolius] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN3406_c0_g1_i1 9.858245089 19.71649018 0 0 #NAME? 8.10E-07 7.90E-06 Down 2.06105 2.456656 2.803019 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34071_c0_g1_i1 14.13755939 0.976834689 27.29828408 27.94565385 4.804552025 7.40E-08 8.31E-07 Up 0.2280393 0 0 1.674626 2.63274 1.308395 SJX33258.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" B6K2L2|RSSA3_SCHJY 40S ribosomal protein S0-C OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) OX=402676 GN=rps0c PE=3 SV=1 cput:CONPUDRAFT_164432 K02998 "RP-SAe, RPSA" small subunit ribosomal protein SAe ko03010 Ribosome KOG0830 40S ribosomal protein SA (P40)/Laminin receptor 1 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0052 30S ribosomal protein S2 Biological Process: ribosomal small subunit assembly (GO:0000028);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627); "PF00318.19,PF16122.4" Ribosomal protein S2|40S ribosomal protein SA C-terminus TRINITY_DN34073_c0_g1_i1 14.80626678 27.77253032 1.840003238 0.066252632 -3.915878415 3.57E-06 3.13E-05 Down 1.583064 2.298051 1.34902 0.04845637 0.1477468 0.05674809 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34076_c0_g1_i1 5.419570021 1.143301217 9.695838826 8.480563723 3.084160167 0.019416767 0.066189944 Up 0.3696186 0 0.281487 1.314847 1.320322 1.780756 XP_012846267.1 PREDICTED: putative late blight resistance protein homolog R1B-16 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34079_c0_g1_i1 3.537842483 7.075684965 0 0 #NAME? 0.023941649 0.078400177 Down 0 2.460606 1.590783 0 0 0 PIM98048.1 hypothetical protein CDL12_29471 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34083_c0_g1_i1 44.48824451 88.97648901 0 0 #NAME? 2.59E-28 1.35E-26 Down 5.591516 8.051175 5.910226 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34095_c0_g1_i1 68.62631477 43.8435197 93.40910984 2.130511202 1.091199637 0.000765265 0.004113401 Up 2.368582 2.59007 4.483298 5.453879 5.98397 4.874685 EYU20575.1 hypothetical protein MIMGU_mgv1a023896mg [Erythranthe guttata] Q15GI3|IGS1_PETHY Isoeugenol synthase 1 OS=Petunia hybrida OX=4102 GN=IGS1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG411193R NmrA-like family Biological Process: phenylpropanoid biosynthetic process (GO:0009699);|Molecular Function: oxidoreductase activity (GO:0016491); "PF05368.12,PF13460.5" NmrA-like family|NAD(P)H-binding TRINITY_DN34099_c0_g1_i1 196.6241929 391.7783491 1.470036737 0.003752215 -8.058041652 6.75E-111 2.00E-108 Down 27.50079 26.13347 24.4198 0.2163006 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF02362.20 B3 DNA binding domain TRINITY_DN34100_c0_g1_i1 4.200266701 8.400533402 0 0 #NAME? 0.00298901 0.013608842 Down 0.9819929 0.9458565 1.743755 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34102_c0_g1_i1 6.529129486 0 13.05825897 Inf Inf 4.30E-05 0.000308221 Up 0 0 0 1.213979 0.7180821 1.201002 -- -- -- -- -- -- -- -- -- -- KOG0161 Myosin class II heavy chain [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5022 myosin heavy chain -- PF01576.18 Myosin tail TRINITY_DN34105_c0_g1_i1 13.78403032 24.96948593 2.598574717 0.104070013 -3.264373672 6.58E-05 0.000453354 Down 1.788581 3.484818 2.415233 0.3098958 0.1536979 0.1713139 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34108_c0_g1_i1 7.02114025 12.95557479 1.086705707 0.08387939 -3.575539826 0.014528766 0.052044215 Down 3.016058 0.5876628 4.263747 0 0.5774909 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34110_c0_g1_i1 8.295116805 16.59023361 0 0 #NAME? 1.03E-05 8.28E-05 Down 4.033102 4.010297 1.949146 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34114_c0_g1_i1 26.61432891 37.68833968 15.54031815 0.412337563 -1.2781022 0.029890265 0.093968335 Down 5.722345 3.051464 5.354216 1.057477 0.4266648 3.171714 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34118_c0_g1_i1 19.47280929 27.79029092 11.15532767 0.401410971 -1.316848047 0.027721693 0.088443266 Down 3.348445 2.916321 3.300165 1.020774 1.031724 1.117416 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34119_c0_g1_i1 6.330961364 0 12.66192273 Inf Inf 5.84E-05 0.000407043 Up 0 0 0 1.862476 1.500089 1.999649 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF16020.4 Deltamethrin resistance TRINITY_DN34123_c0_g1_i1 25.82614427 51.2665002 0.385788347 0.007525155 -7.054063037 1.49E-15 3.57E-14 Down 4.292801 6.094588 6.116595 0 0 0.1050176 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34126_c0_g1_i1 3.339130041 6.678260083 0 0 #NAME? 0.011394636 0.042427751 Down 0.8645283 0.835121 0.9018486 0 0 0 XP_023758851.1 uncharacterized protein LOC111907314 [Lactuca sativa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111DM2 NA -- -- -- TRINITY_DN3412_c0_g1_i1 7.552556291 13.98957982 1.115532767 0.079740262 -3.648547835 0.001817246 0.008843295 Down 1.195019 0.7229337 1.306032 0.06386363 0.06259636 0.0716852 KRH12253.1 hypothetical protein GLYMA_15G162400 [Glycine max] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- PF14111.5 Domain of unknown function (DUF4283) TRINITY_DN34130_c0_g1_i1 13.98751232 2.619535491 25.35548915 9.679383707 3.274915193 6.14E-05 0.000426349 Up 0.1360298 0 0.5066891 2.356356 1.054687 2.000638 ATO94326.1 "ribosomal protein S3, partial [synthetic construct]" Q9FJA6|RS33_ARATH 40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1 thj:104815324 K02985 "RP-S3e, RPS3" small subunit ribosomal protein S3e ko03010 Ribosome KOG3181 40S ribosomal protein S3 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0092 "Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (By similarity)" Molecular Function: damaged DNA binding (GO:0003684);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Molecular Function: DNA-(apurinic or apyrimidinic site) endonuclease activity (GO:0003906);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Biological Process: DNA repair (GO:0006281);|Biological Process: translation (GO:0006412);|Molecular Function: oxidized purine nucleobase lesion DNA N-glycosylase activity (GO:0008534);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to salt stress (GO:0009651);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Molecular Function: oxidized purine DNA binding (GO:0032357);|Biological Process: positive regulation of DNA repair (GO:0045739); "PF00189.19,PF07650.16" "Ribosomal protein S3, C-terminal domain|KH domain" TRINITY_DN34131_c0_g1_i1 10.99777463 17.43920575 4.556343511 0.261270128 -1.936385912 0.029288258 0.09241498 Down 4.424477 1.245089 3.034812 0.6101128 0 1.292837 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34136_c0_g1_i1 9.331801731 18.66360346 0 0 #NAME? 2.12E-06 1.93E-05 Down 2.968364 3.86156 2.310988 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34138_c0_g1_i1 20.88982421 41.00807173 0.771576693 0.01881524 -5.731954531 1.19E-11 2.10E-10 Down 3.172196 5.086481 5.910582 0 0 0.2326184 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34139_c0_g1_i1 8.947461031 17.89492206 0 0 #NAME? 2.97E-06 2.64E-05 Down 2.006014 4.070531 3.96198 0 3.53E-85 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34151_c0_g1_i1 7.017393532 14.03478706 0 0 #NAME? 5.62E-05 0.000393778 Down 1.544835 0.983437 1.202294 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34155_c0_g1_i1 13.04076974 26.08153948 0 0 #NAME? 9.47E-09 1.20E-07 Down 5.923872 4.898464 4.709328 0 0 0 SJX24458.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" Q751L1|RL43_ASHGO 60S ribosomal protein L43 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=RPL43 PE=3 SV=1 mrr:Moror_6908 K02921 "RP-L37Ae, RPL37A" large subunit ribosomal protein L37Ae ko03010 Ribosome KOG0402 60S ribosomal protein L37 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1997 Ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN34158_c0_g1_i1 8.040214873 16.08042975 0 0 #NAME? 0.005092172 0.02151044 Down 5.531786 1.633474 1.07306 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34159_c0_g1_i1 5.709038254 0 11.41807651 Inf Inf 0.000149518 0.000956599 Up 0 0 0 0.9059509 1.485373 0.667339 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34169_c0_g1_i1 18.37621428 7.914655704 28.83777285 3.643591576 1.865361251 0.002820984 0.012973954 Up 0.9795963 0.5486583 0.6581804 1.907293 1.57099 3.156612 XP_023767508.1 uncharacterized protein LOC111916103 [Lactuca sativa] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBST Mariner sub-class -- -- -- TRINITY_DN34171_c0_g1_i1 8.753552203 2.346452671 15.16065173 6.461094196 2.691778508 0.030093873 0.094438382 Up 0 0.2689216 0.8213606 0.6913127 3.254983 1.819447 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34174_c0_g1_i1 4.013517342 8.027034685 0 0 #NAME? 0.004155939 0.018097712 Down 0.8387089 1.352141 1.263996 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34175_c0_g1_i1 6.954224247 13.90844849 0 0 #NAME? 5.47E-05 0.000384196 Down 1.311935 2.09834 2.334715 0 0 0 RHN60765.1 putative RNA-directed DNA polymerase [Medicago truncatula] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YB3X Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN34177_c0_g1_i1 4.642136843 9.284273686 0 0 #NAME? 0.001579039 0.007819914 Down 1.596269 1.532531 2.473922 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34179_c0_g1_i1 7.835625123 13.35652017 2.31473008 0.173303379 -2.528628309 0.014004453 0.050460717 Down 2.7545 2.706926 2.564119 0 0 1.064954 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34180_c0_g1_i1 6.316547834 0 12.63309567 Inf Inf 5.90E-05 0.000410934 Up 0 0 0 1.687024 1.7278 1.718577 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34182_c0_g1_i1 20.31160241 40.62320482 0 0 #NAME? 1.45E-05 0.000113881 Down 5.473382 2.893801 1.331234 0 0 0 -- -- Q8GWG0|GPAT9_ARATH Glycerol-3-phosphate acyltransferase 9 OS=Arabidopsis thaliana OX=3702 GN=GPAT9 PE=1 SV=1 pxb:103937258 K13506 "GPAT3_4, AGPAT9, AGPAT6" glycerol-3-phosphate O-acyltransferase 3/4 ko00564|ko00561 Glycerophospholipid metabolism|Glycerolipid metabolism KOG2898 "Predicted phosphate acyltransferase, contains PlsC domain" [I] METABOLISM Lipid transport and metabolism -- -- -- Molecular Function: glycerol-3-phosphate O-acyltransferase activity (GO:0004366);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: glycerol-3-phosphate metabolic process (GO:0006072);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Biological Process: diacylglycerol biosynthetic process (GO:0006651);|Biological Process: phospholipid biosynthetic process (GO:0008654);|Biological Process: pollen maturation (GO:0010152);|Biological Process: seed oilbody biogenesis (GO:0010344);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: triglyceride biosynthetic process (GO:0019432);|Biological Process: lipid storage (GO:0019915);|Molecular Function: protein self-association (GO:0043621);|Biological Process: gametophyte development (GO:0048229);|Molecular Function: sn-1-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity (GO:0102420); -- -- TRINITY_DN34183_c0_g1_i1 2.23756814 0 4.47513628 Inf Inf 0.041078843 0.121201944 Up 0 0 0 0.2962329 0.7698131 0.9018525 -- -- -- -- -- -- -- -- -- -- KOG4571 Activating transcription factor 4 [K] INFORMATION STORAGE AND PROCESSING Transcription K ENOG4111ZXT Activating transcription factor -- PF00170.20 bZIP transcription factor TRINITY_DN34185_c0_g1_i1 9.439211858 1.248358704 17.63006501 14.1225955 3.819933351 0.000160501 0.001019108 Up 0 0.4706102 0 1.418998 1.441149 2.864065 ACL87137.1 "RpS16-PA, partial [synthetic construct]" Q9SK22|RS161_ARATH 40S ribosomal protein S16-1 OS=Arabidopsis thaliana OX=3702 GN=RPS16A PE=2 SV=1 nnu:104596484 K02960 "RP-S16e, RPS16" small subunit ribosomal protein S16e ko03010 Ribosome KOG1753 40S ribosomal protein S16 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0103 30S ribosomal protein S9 "Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cell wall (GO:0005618);|Cellular Component: cytosol (GO:0005829);|Biological Process: translation (GO:0006412);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Cellular Component: polysomal ribosome (GO:0042788);" PF00380.18 Ribosomal protein S9/S16 TRINITY_DN34190_c0_g1_i1 7.883373221 15.76674644 0 0 #NAME? 0.032453054 0.100596934 Down 2.460345 7.179845 0 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34192_c0_g1_i1 7.201219786 0 14.40243957 Inf Inf 1.38E-05 0.000108699 Up 0 0 0 1.261484 1.907319 1.058798 ACL88724.1 "Cpr47Ea-PA, partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111PJ1 Cuticular protein -- PF00379.22 Insect cuticle protein TRINITY_DN34197_c0_g1_i1 15.42853265 30.85706531 0 0 #NAME? 0.001056586 0.005485718 Down 1.508462 9.330913 3.504985 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34209_c0_g1_i1 32.91744813 44.08419894 21.75069732 0.493389873 -1.01919999 0.020462685 0.069037321 Down 4.122758 5.049622 5.545357 1.086654 1.723074 3.09096 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34211_c0_g1_i1 14.5719336 2.405181808 26.73868539 11.1171161 3.47471068 8.19E-06 6.73E-05 Up 0.1846059 0.1792508 0.09514163 1.126544 1.332932 1.243641 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34214_c0_g1_i1 4.904797972 9.809595945 0 0 #NAME? 0.001152523 0.005917482 Down 2.166517 0.7249992 1.708677 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34217_c0_g1_i1 21.26501219 3.628055542 38.90196885 10.7225395 3.422574725 7.05E-08 7.95E-07 Up 0.6563559 0.3178888 0.2541321 2.696635 4.84291 3.459317 SJX28906.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" O43105|RS7_NEUCR 40S ribosomal protein S7 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=crp-15 PE=3 SV=2 psq:PUNSTDRAFT_100026 K02993 "RP-S7e, RPS7" small subunit ribosomal protein S7e ko03010 Ribosome KOG3320 40S ribosomal protein S7 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J ENOG410ZYKB ribosomal protein S7 Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: rRNA processing (GO:0006364);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Cellular Component: small-subunit processome (GO:0032040);|Biological Process: ribosomal small subunit biogenesis (GO:0042274); PF01251.17 Ribosomal protein S7e TRINITY_DN34218_c0_g1_i1 29.74877083 1.275402478 58.22213918 45.6500126 5.512543353 7.19E-17 1.91E-15 Up 0.3362603 0.3240898 0 6.029347 5.703173 8.33291 ATO97691.1 "ribosomal protein lateral stalk subunit P2, partial [synthetic construct]" Q9SLF7|RLA22_ARATH 60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 SV=1 shs:STEHIDRAFT_131291 K02943 "RP-LP2, RPLP2" large subunit ribosomal protein LP2 ko03010 Ribosome KOG3449 60S acidic ribosomal protein P2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2058 Ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translational elongation (GO:0006414);|Biological Process: response to cold (GO:0009409);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: polysomal ribosome (GO:0042788); PF00428.18 60s Acidic ribosomal protein TRINITY_DN34219_c0_g1_i1 5.314361312 1.428347119 9.200375505 6.44127424 2.687346117 0.03671102 0.110814159 Up 0 0.516486 0.211969 2.159691 1.316186 0.4790119 XP_011096163.1 putative F-box protein At5g50220 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34222_c0_g1_i1 9.181536994 18.36307399 0 0 #NAME? 2.05E-06 1.87E-05 Down 3.538867 2.440693 4.602757 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34225_c0_g1_i1 9.989566948 19.9791339 0 0 #NAME? 7.22E-07 7.08E-06 Down 1.526299 3.700855 2.391619 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34227_c0_g1_i1 14.24655658 3.111613582 25.38149958 8.157021721 3.028042494 0.00015494 0.000987117 Up 0.3438042 0 1.053244 3.379209 2.076597 3.565099 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34236_c0_g1_i1 7.117960166 12.37236398 1.863556349 0.150622496 -2.730990834 0.015481422 0.054803727 Down 1.173929 1.207341 0.8886415 0.06859054 0.1390437 0.1547469 KZV37944.1 hypothetical protein F511_17716 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YP2B Retroviral aspartyl protease -- "PF08284.10,PF13975.5,PF13650.5" Retroviral aspartyl protease|gag-polyprotein putative aspartyl protease|Aspartyl protease TRINITY_DN34239_c0_g1_i1 7.211874404 12.5419133 1.881835511 0.150043735 -2.736545017 0.042893385 0.125430615 Down 1.250824 4.103333 1.290845 0 0.3609715 0.4074638 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34242_c0_g1_i1 46.01493597 90.55737789 1.472494053 0.016260343 -5.942498472 1.71E-24 7.26E-23 Down 4.678831 5.945439 5.677757 0 0.1800508 0.06466642 AIC49899.1 "TPT1, partial [synthetic construct]" Q10344|TCTP_SCHPO Translationally-controlled tumor protein homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=p23fy PE=1 SV=1 -- -- -- -- -- -- KOG1727 Microtubule-binding protein (translationally controlled tumor protein) [DZ] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning |Cytoskeleton " S ENOG4111FVP tumor protein Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Molecular Function: guanyl nucleotide exchange factor inhibitor activity (GO:1990624); PF00838.16 Translationally controlled tumour protein TRINITY_DN34243_c0_g1_i1 2.837970212 5.675940424 0 0 #NAME? 0.022698916 0.075083574 Down 1.3286 0.6492195 1.540842 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34244_c0_g1_i1 3.99189456 7.983789119 0 0 #NAME? 0.028742502 0.09111092 Down 0.7983522 2.728967 0.3128758 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34245_c0_g1_i1 4.097258856 0 8.194517713 Inf Inf 0.002090798 0.010007129 Up 0 0 0 0.9422476 0.9507991 1.301617 ACL84759.1 "CG14207-PA, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG3591 Alpha crystallins [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG410YERS Heat shock protein -- PF00011.20 Hsp20/alpha crystallin family TRINITY_DN34255_c0_g1_i1 5.345888712 10.69177742 0 0 #NAME? 0.000609351 0.003362131 Down 1.414433 1.625812 1.659804 0 0 0 GAU32780.1 hypothetical protein TSUD_152280 [Trifolium subterraneum] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN3425_c0_g2_i1 3.348211779 6.696423559 0 0 #NAME? 0.01232983 0.045326204 Down 1.292304 1.885239 0.4950569 0 0 0 ATO94268.1 "ornithine decarboxylase antizyme 1, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG4387 Ornithine decarboxylase antizyme [E] METABOLISM Amino acid transport and metabolism S ENOG4112791 Ornithine decarboxylase antizyme -- -- -- TRINITY_DN34261_c0_g1_i1 7.028577213 14.05715443 0 0 #NAME? 0.002304143 0.010864438 Down 0.5921722 3.309204 1.354713 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34268_c0_g1_i1 5.658064359 10.22942301 1.086705707 0.106233334 -3.234691574 0.014137709 0.050835949 Down 1.940162 0.9355928 3.036996 0 0.4223177 0 PIN20272.1 "DNA replication licensing factor, MCM3 component [Handroanthus impetiginosus]" -- -- sind:105167300 K02541 MCM3 DNA replication licensing factor MCM3 ko03030 DNA replication -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34270_c0_g1_i1 9.846721067 0 19.69344213 Inf Inf 2.07E-07 2.19E-06 Up 0 0 0 0.8461079 2.378281 1.905781 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34277_c0_g1_i1 14.12935745 3.628055542 24.63065936 6.788942196 2.763186802 0.000211942 0.001310717 Up 1.149554 0.5616855 0.4351679 3.757002 3.338628 5.141145 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34279_c0_g1_i1 5.972188847 10.47434096 1.470036737 0.140346466 -2.832935358 0.024147832 0.078938684 Down 3.266966 0.6576442 2.092343 0.7305824 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3427_c0_g1_i2 6.784096972 13.56819394 0 0 #NAME? 8.15E-05 0.000550934 Down 1.989078 2.088238 1.50124 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34281_c0_g1_i1 2.396540963 0 4.793081926 Inf Inf 0.031093908 0.097053274 Up 0 0 0 1.304968 0.6618239 0.3610988 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34283_c0_g1_i1 5.434122676 10.86824535 0 0 #NAME? 0.009860749 0.037634856 Down 0.7077378 1.342571 4.302788 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34288_c0_g1_i1 14.47931721 0.492078091 28.46655634 57.84967233 5.854236883 9.17E-09 1.16E-07 Up 0 0 0.1503209 3.185009 2.556662 1.809361 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF00098.22,PF14392.5,PF14787.5,PF13917.5" Zinc knuckle|Zinc knuckle|GAG-polyprotein viral zinc-finger|Zinc knuckle TRINITY_DN34289_c0_g1_i1 4.099641371 7.464264374 0.735018369 0.098471642 -3.344147876 0.037453569 0.11256486 Down 1.200698 0.7611221 2.126147 0.3770261 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3428_c0_g1_i1 11.73910432 22.00817191 1.470036737 0.066795041 -3.904115199 4.58E-05 0.000327213 Down 5.204595 3.028164 2.806583 0.5374493 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34299_c0_g1_i1 11.38988945 22.7797789 0 0 #NAME? 3.41E-05 0.000250185 Down 0.8923095 4.111985 4.448512 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34300_c0_g1_i1 11.19359926 17.19004909 5.197149435 0.302334764 -1.725781218 0.035961696 0.109118268 Down 1.859755 2.197831 1.860329 0.647352 0.434794 0.4345491 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34308_c0_g1_i1 4.527218216 9.054436432 0 0 #NAME? 0.016279515 0.057125544 Down 1.23133 0.4033264 3.484843 0 0 0 OVA03826.1 zinc finger protein [Macleaya cordata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34311_c0_g1_i1 5.599755515 10.11280532 1.086705707 0.107458383 -3.218150062 0.018463411 0.063454695 Down 2.015831 1.966586 1.260959 0 0.3830123 0 KYP75927.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] P92520|M820_ARATH Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Cellular Component: mitochondrion (GO:0005739); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN34321_c0_g1_i1 12.85908252 19.92240127 5.795763768 0.290916928 -1.78132085 0.030881676 0.096490357 Down 3.633106 2.292964 2.613141 0 1.968849 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34322_c0_g1_i1 12.49381032 0 24.98762065 Inf Inf 3.13E-09 4.21E-08 Up 0 0 0 3.268502 3.420231 4.432061 CAD40782.2 OSJNBb0012E08.6 [Oryza sativa Japonica Group] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 bvg:104905624 K05658 ABCB1 "ATP-binding cassette, subfamily B (MDR/TAP), member 1" ko02010 ABC transporters KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN34323_c0_g1_i1 12.45050439 0.651223126 24.24978565 37.23729193 5.218676252 2.14E-07 2.26E-06 Up 0.194509 0 0 1.433421 2.724645 3.20559 ACL89715.1 Cpr49Ae-PA [synthetic construct] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YR66 structural constituent of chitin-based cuticle -- PF00379.22 Insect cuticle protein TRINITY_DN34327_c0_g1_i1 25.70637182 0 51.41274364 Inf Inf 2.01E-18 5.93E-17 Up 0 0 0 9.026722 8.70015 6.053417 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3432_c0_g1_i1 3.421583903 6.843167807 0 0 #NAME? 0.011796837 0.043699512 Down 0.2304592 2.229024 1.392256 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34337_c0_g1_i1 5.688948412 0.624179352 10.75371747 17.2285697 4.10673103 0.002865092 0.013143517 Up 0 0.2371356 0 0.8629596 1.749545 1.213966 XP_020552794.1 endochitinase EP3-like [Sesamum indicum] Q9M2U5|CHI5_ARATH Endochitinase EP3 OS=Arabidopsis thaliana OX=3702 GN=EP3 PE=1 SV=1 sind:105172091 K01183 E3.2.1.14 chitinase ko00520 Amino sugar and nucleotide sugar metabolism KOG4742 Predicted chitinase [R] POORLY CHARACTERIZED General function prediction only G COG3979 chitinase Biological Process: polysaccharide catabolic process (GO:0000272);|Molecular Function: chitinase activity (GO:0004568);|Cellular Component: cell wall (GO:0005618);|Biological Process: chitin catabolic process (GO:0006032);|Biological Process: defense response (GO:0006952);|Molecular Function: chitin binding (GO:0008061);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to bacterium (GO:0009617);|Biological Process: somatic embryogenesis (GO:0010262);|Biological Process: cell wall macromolecule catabolic process (GO:0016998); "PF00182.18,PF00187.18" Chitinase class I|Chitin recognition protein TRINITY_DN34340_c0_g1_i1 4.49883449 8.99766898 0 0 #NAME? 0.001946365 0.009400081 Down 0.8400744 1.628891 1.954033 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34344_c0_g1_i1 11.06499025 19.09851122 3.031469287 0.158728042 -2.65537107 0.002153393 0.010260205 Down 3.726036 3.177922 3.643521 0.4093349 0 0.8821104 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34345_c0_g1_i1 5.93357612 0 11.86715224 Inf Inf 0.003529269 0.01569859 Up 0 0 0 3.015614 0.5606178 1.080271 AAX18287.1 major allergen Mal d 1.01 [Malus domestica] P43211|MAL11_MALDO Major allergen Mal d 1 OS=Malus domestica OX=3750 GN=MALD1 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZD18 Pathogenesis-related protein Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607); PF00407.18 Pathogenesis-related protein Bet v I family TRINITY_DN34349_c0_g1_i1 5.44574406 10.89148812 0 0 #NAME? 0.000558525 0.003117698 Down 1.702866 0.9654925 1.104967 0 0 0 XP_012832203.1 PREDICTED: pyruvate decarboxylase 1 [Erythranthe guttata] P51845|PDC1_TOBAC Pyruvate decarboxylase 1 (Fragment) OS=Nicotiana tabacum OX=4097 GN=PDC1 PE=2 SV=1 sind:105174592 K01568 "E4.1.1.1, pdc" pyruvate decarboxylase ko00010 Glycolysis / Gluconeogenesis KOG1184 Thiamine pyrophosphate-requiring enzyme [EH] METABOLISM|METABOLISM Amino acid transport and metabolism |Coenzyme transport and metabolism GH COG3961 Pyruvate decarboxylase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: pyruvate decarboxylase activity (GO:0004737);|Molecular Function: thiamine pyrophosphate binding (GO:0030976); PF02775.20 "Thiamine pyrophosphate enzyme, C-terminal TPP binding domain" TRINITY_DN3434_c0_g1_i1 342.0999905 667.4174261 16.78255504 0.025145515 -5.313555077 4.60E-146 2.01E-143 Down 43.19126 42.67909 40.10809 0.6102557 0.8637937 1.044986 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34355_c0_g1_i1 7.925242589 2.120135906 13.73034927 6.476164681 2.695139672 0.007562322 0.030133117 Up 0.6333131 0 0.1610233 1.434104 1.444606 1.387868 ACL87210.1 "GstD1-PA, partial [synthetic construct]" Q03425|GSTZ2_DIACA Glutathione S-transferase 2 (Fragment) OS=Dianthus caryophyllus OX=3570 GN=GST2 PE=2 SV=1 cput:CONPUDRAFT_56766 K00799 "GST, gst" glutathione S-transferase ko00480 Glutathione metabolism KOG0867 Glutathione S-transferase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0625 glutathione Stransferase Molecular Function: glutathione transferase activity (GO:0004364);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: aromatic amino acid family metabolic process (GO:0009072); "PF13417.5,PF02798.19,PF13409.5" "Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, N-terminal domain" TRINITY_DN34357_c0_g1_i1 19.1115075 37.49327057 0.72974442 0.019463344 -5.683096595 1.65E-10 2.56E-09 Down 3.65354 2.884398 3.64889 0.07988937 0.07891579 0 SJX31136.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" P05752|RS6A_SCHPO 40S ribosomal protein S6-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rps601 PE=1 SV=2 ttt:THITE_2171611 K02991 "RP-S6e, RPS6" small subunit ribosomal protein S6e ko03010 Ribosome KOG1646 40S ribosomal protein S6 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2125 40s ribosomal protein s6 Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Biological Process: ribosome biogenesis (GO:0042254); PF01092.18 Ribosomal protein S6e TRINITY_DN34359_c0_g1_i1 11.47546092 22.95092184 0 0 #NAME? 3.32E-06 2.93E-05 Down 3.432598 2.124511 6.002896 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3435_c0_g1_i1 3.738113728 7.476227457 0 0 #NAME? 0.005761806 0.023920399 Down 0.5556686 1.613288 2.144931 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34360_c0_g1_i1 2.591931167 5.183862333 0 0 #NAME? 0.033261115 0.102506742 Down 1.170209 0.5732487 1.054467 0 0 0 XP_012832636.1 PREDICTED: uncharacterized protein LOC105953513 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34361_c0_g1_i1 13.71205685 27.42411369 0 0 #NAME? 3.20E-09 4.29E-08 Down 2.518384 2.886184 2.862875 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34364_c0_g1_i1 15.98136221 2.132098988 29.83062543 13.99120097 3.8064479 6.47E-07 6.39E-06 Up 0.05390955 0.2590275 0.04021122 1.445046 0.8362589 1.416545 AOQ05733.1 "Ef1gamma-RA, partial [synthetic construct]" O04487|EF1G1_ARATH Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana OX=3702 GN=At1g09640 PE=1 SV=1 -- -- -- -- -- -- KOG1627 Translation elongation factor EF-1 gamma [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " O COG0625 glutathione Stransferase Molecular Function: translation elongation factor activity (GO:0003746);|Cellular Component: vacuole (GO:0005773);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506); "PF00647.18,PF02798.19,PF00043.24,PF13410.5,PF13417.5" "Elongation factor 1 gamma, conserved domain|Glutathione S-transferase, N-terminal domain|Glutathione S-transferase, C-terminal domain|Glutathione S-transferase, C-terminal domain|Glutathione S-transferase, N-terminal domain" TRINITY_DN34365_c0_g1_i1 7.484547204 14.96909441 0 0 #NAME? 0.000221947 0.001364228 Down 2.340027 0.619228 3.354422 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34368_c0_g1_i1 8.287955208 1.050206813 15.5257036 14.78347256 3.885913286 0.000574347 0.003194622 Up 0 0.1151213 0.1805733 0.8873067 1.787012 0.9936739 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34370_c0_g1_i1 6.449403671 12.89880734 0 0 #NAME? 0.000118769 0.00077483 Down 1.743136 1.526887 1.947811 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34375_c0_g1_i1 14.41981116 28.83962232 0 0 #NAME? 9.88E-05 0.000656105 Down 1.137398 7.909915 8.187165 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34381_c0_g1_i1 13.25228644 7.584805432 18.91976744 2.494430162 1.318710278 0.049787191 0.141231718 Up 1.322397 3.22336 0 4.011014 2.708682 2.790966 KYP50811.1 "LINE-1 reverse transcriptase isogeny, partial [Cajanus cajan]" P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4112A03 Retrotransposon protein Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN34388_c0_g1_i1 17.80039501 25.09118291 10.50960711 0.418856582 -1.255471751 0.044408258 0.128882505 Down 5.179391 5.042415 4.520583 2.778029 0 2.170222 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34390_c0_g1_i1 6.916377495 1.674386165 12.15836883 7.261388729 2.860245488 0.011438627 0.042574091 Up 0 0.4944628 0.398267 1.976335 2.451048 1.029046 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34392_c0_g1_i1 3.918778213 0 7.837556426 Inf Inf 0.002801835 0.0128982 Up 0 0 0 1.230644 0.8202211 1.339131 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34395_c0_g1_i1 7.773852612 2.796844001 12.75086122 4.559017671 2.188723001 0.025347999 0.08214033 Up 0.3866779 0.3750986 0.09951756 0.9603084 0.5915341 1.508335 XP_011100553.1 zinc finger protein CONSTANS-LIKE 9 [Sesamum indicum] Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YA5C Zinc finger protein CONSTANS-LIKE "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: circadian rhythm (GO:0007623);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: negative regulation of long-day photoperiodism, flowering (GO:0048579);" PF06203.13 CCT motif TRINITY_DN34397_c0_g1_i1 3.045983243 6.091966487 0 0 #NAME? 0.04028084 0.119312768 Down 1.892178 1.119183 0 0 0 0 XP_019196049.1 PREDICTED: uncharacterized protein LOC109189882 [Ipomoea nil] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y1CH Reverse transcriptase (RNA-dependent DNA polymerase) -- -- -- TRINITY_DN34399_c0_g1_i1 8.689356027 0 17.37871205 Inf Inf 1.78E-06 1.64E-05 Up 0 0 0 0.9173143 2.594528 1.440311 ABM87499.1 "poly(A) binding protein, cytoplasmic 1, partial [synthetic construct]" A1CRM1|PABP_ASPCL "Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) OX=344612 GN=pab1 PE=3 SV=1" ela:UCREL1_7601 K13126 PABPC polyadenylate-binding protein ko03018|ko03015|ko03013 RNA degradation|mRNA surveillance pathway|RNA transport KOG0123 Polyadenylate-binding protein (RRM superfamily) [AJ] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING "RNA processing and modification |Translation, ribosomal structure and biogenesis " S ENOG410XR5X "poly(A) binding protein, cytoplasmic" Molecular Function: RNA binding (GO:0003723);|Biological Process: mRNA processing (GO:0006397);|Biological Process: mRNA export from nucleus (GO:0006406);|Biological Process: regulation of translation (GO:0006417);|Cellular Component: cytoplasmic stress granule (GO:0010494);|Cellular Component: post-mRNA release spliceosomal complex (GO:0071014); PF00076.21 "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" TRINITY_DN34402_c0_g1_i1 12.36714443 24.73428886 0 0 #NAME? 1.57E-07 1.69E-06 Down 3.697506 6.747267 2.893174 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34408_c0_g1_i1 16.96407403 33.92814805 0 0 #NAME? 2.77E-11 4.70E-10 Down 3.579643 5.986524 5.175518 0 0 0 ATO94326.1 "ribosomal protein S3, partial [synthetic construct]" Q9FJA6|RS33_ARATH 40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1 mpp:MICPUCDRAFT_26239 K02985 "RP-S3e, RPS3" small subunit ribosomal protein S3e ko03010 Ribosome KOG3181 40S ribosomal protein S3 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0092 "Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (By similarity)" Molecular Function: damaged DNA binding (GO:0003684);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Molecular Function: DNA-(apurinic or apyrimidinic site) endonuclease activity (GO:0003906);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Biological Process: DNA repair (GO:0006281);|Biological Process: translation (GO:0006412);|Molecular Function: oxidized purine nucleobase lesion DNA N-glycosylase activity (GO:0008534);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: response to salt stress (GO:0009651);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Molecular Function: oxidized purine DNA binding (GO:0032357);|Biological Process: positive regulation of DNA repair (GO:0045739); "PF07650.16,PF00189.19" "KH domain|Ribosomal protein S3, C-terminal domain" TRINITY_DN34412_c0_g1_i1 9.736806428 4.325607018 15.14800584 3.501937595 1.808153375 0.038176336 0.114279768 Up 0.402797 0.7785565 0.6180487 1.982035 1.966727 1.266695 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34418_c0_g1_i1 11.66480228 5.144855477 18.18474907 3.534550029 1.821526562 0.022690708 0.075076726 Up 1.747638 0 1.401273 3.548236 2.710255 2.724711 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34419_c0_g1_i1 21.44663279 31.7354806 11.15778498 0.351587081 -1.508046036 0.037591453 0.112878799 Down 5.515265 8.980222 2.932011 0.9749932 1.984519 1.906828 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34425_c0_g1_i1 5.474329226 10.94865845 0 0 #NAME? 0.000594269 0.003292524 Down 2.415993 2.874069 0.9390988 0 0 0 PIN08550.1 Cellulose synthase (UDP-forming) [Handroanthus impetiginosus] Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana OX=3702 GN=CSLG3 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: plant-type primary cell wall biogenesis (GO:0009833);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: cellulose synthase activity (GO:0016759);|Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);|Biological Process: cellulose biosynthetic process (GO:0030244);|Biological Process: cell wall organization (GO:0071555); -- -- TRINITY_DN34426_c0_g1_i1 13.10044749 19.17920484 7.021690143 0.366109555 -1.449652669 0.046909487 0.134650459 Down 2.130255 2.474169 3.505164 1.597055 0.3886981 0.4145612 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34436_c0_g1_i1 16.43891969 0.738117137 32.13972224 43.54284793 5.444363865 2.94E-09 3.97E-08 Up 0 0 0.2564946 2.014907 2.4674 3.709824 AOQ12144.1 Tctp-PA [synthetic construct] Q4PF30|TCTP_USTMA Translationally-controlled tumor protein homolog OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=UMAG_12131 PE=3 SV=2 -- -- -- -- -- -- KOG1727 Microtubule-binding protein (translationally controlled tumor protein) [DZ] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning |Cytoskeleton " S ENOG4111FVP tumor protein Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874);|Biological Process: translation (GO:0006412); PF00838.16 Translationally controlled tumour protein TRINITY_DN34437_c0_g1_i1 23.12585152 32.70571202 13.54599103 0.414178142 -1.271676678 0.019310025 0.065895351 Down 2.652255 2.851199 2.424484 0.8081707 0.4367849 1.492571 XP_025015038.1 uncharacterized protein LOC112536496 [Ricinus communis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34440_c0_g1_i1 14.77969622 22.90275417 6.656638275 0.290647938 -1.782655421 0.024614782 0.080202429 Down 5.147713 3.328199 1.551818 1.038657 0.7832021 0.5842288 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34444_c0_g1_i1 9.362410668 0.246039046 18.47878229 75.10508036 6.230838595 3.51E-06 3.08E-05 Up 0 0 0.09570953 1.538224 2.10499 1.265421 ACG44046.1 60S ribosomal protein L11 [Zea mays] P0CT78|RL11B_SCHPO 60S ribosomal protein L11-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl1102 PE=2 SV=1 yli:YALI0B15103g K02868 "RP-L11e, RPL11" large subunit ribosomal protein L11e ko03010 Ribosome KOG0397 60S ribosomal protein L11 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0094 "This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits" Biological Process: ribosomal large subunit assembly (GO:0000027);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Biological Process: ribosome biogenesis (GO:0042254); "PF00281.18,PF00673.20" Ribosomal protein L5|ribosomal L5P family C-terminus TRINITY_DN34445_c0_g1_i1 12.44632337 1.248358704 23.64428803 18.94029974 4.243387257 2.72E-06 2.43E-05 Up 0 0.399041 0 1.325465 2.650799 1.453329 AOQ07626.1 "RpS9-RA, partial [synthetic construct]" P52810|RS9_PODAS 40S ribosomal protein S9 OS=Podospora anserina OX=5145 GN=RPS9 PE=3 SV=1 cim:CIMG_00377 K02997 "RP-S9e, RPS9" small subunit ribosomal protein S9e ko03010 Ribosome KOG3301 Ribosomal protein S4 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0522 "One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (By similarity)" Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: small ribosomal subunit (GO:0015935);|Molecular Function: rRNA binding (GO:0019843); "PF01479.24,PF00163.18" S4 domain|Ribosomal protein S4/S9 N-terminal domain TRINITY_DN34448_c0_g1_i1 8.52669723 0 17.05339446 Inf Inf 1.68E-06 1.56E-05 Up 0 0 0 1.763107 1.777565 1.535548 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34454_c0_g1_i1 3.296411128 0.246039046 6.34678321 25.79583738 4.689066375 0.02713114 0.08689507 Up 0 0 0.1754943 1.34377 0.3385034 1.021621 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF03634.12 TCP family transcription factor TRINITY_DN3445_c0_g1_i1 4.64061171 0 9.281223419 Inf Inf 0.000863967 0.004584227 Up 0 0 0 0.8978677 1.27487 1.063474 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34462_c0_g1_i1 20.71990322 30.62034426 10.81946217 0.353342277 -1.500861717 0.034595152 0.105806343 Down 3.186491 6.586517 2.880768 1.856599 0.4675454 1.356095 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34470_c0_g1_i1 19.05755612 1.182308074 36.93280417 31.23788545 4.965224893 3.22E-10 4.84E-09 Up 0 0.204612 0.08006895 2.050994 2.143317 2.926202 ACL86762.1 "RpL8-PA, partial [synthetic construct]" P46286|RL81_ARATH 60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2 eus:EUTSA_v10022820mg K02938 "RP-L8e, RPL8" large subunit ribosomal protein L8e ko03010 Ribosome KOG2309 60s ribosomal protein L2/L8 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0090 "One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity" Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: polysomal ribosome (GO:0042788); "PF03947.17,PF00181.22" "Ribosomal Proteins L2, C-terminal domain|Ribosomal Proteins L2, RNA binding domain" TRINITY_DN34479_c0_g1_i1 14.23705535 22.8757104 5.598400311 0.244731211 -2.030729992 0.013192542 0.04802703 Down 5.585772 4.122473 1.867754 0 1.111365 1.163809 XP_012828123.1 PREDICTED: condensin complex subunit 1 [Erythranthe guttata] -- -- -- -- -- -- -- -- KOG0414 "Chromosome condensation complex Condensin, subunit D2" [BD] INFORMATION STORAGE AND PROCESSING|CELLULAR PROCESSES AND SIGNALING "Chromatin structure and dynamics |Cell cycle control, cell division, chromosome partitioning " BD COG5098 "Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity)" -- PF12922.6 "non-SMC mitotic condensation complex subunit 1, N-term" TRINITY_DN34483_c0_g1_i1 6.440321933 12.88064387 0 0 #NAME? 0.000110375 0.000725174 Down 2.150563 1.316162 3.036574 0 0 0 AIC50841.1 "RPL35, partial [synthetic construct]" Q9M5L0|RL35_EUPES 60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1 egu:105045751 K02918 "RP-L35e, RPL35" large subunit ribosomal protein L35e ko03010 Ribosome KOG3436 60S ribosomal protein L35 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0255 50s ribosomal protein l29 Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF00831.22 Ribosomal L29 protein TRINITY_DN34485_c0_g1_i1 7.075903817 14.15180763 0 0 #NAME? 5.34E-05 0.00037618 Down 2.254858 3.773644 2.075103 0 0 0 XP_011084978.1 7-deoxyloganetic acid glucosyltransferase-like [Sesamum indicum] U3U992|UGT8_CATRO 7-deoxyloganetic acid glucosyltransferase OS=Catharanthus roseus OX=4058 GN=UGT709C2 PE=1 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glucosyltransferase activity (GO:0035251);|Molecular Function: 7-deoxyloganetic acid glucosyltransferase activity (GO:0102970);|Biological Process: (-)-secologanin biosynthetic process (GO:1900994); -- -- TRINITY_DN34489_c0_g1_i1 10.30437349 18.67980525 1.928941734 0.103263482 -3.275597944 0.000511604 0.002881293 Down 3.573332 3.497921 4.14553 0 0 0.8632297 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3448_c0_g1_i1 19.63830281 10.6195264 28.65707922 2.698527047 1.432172148 0.019708057 0.067016841 Up 0.4139493 0.7973717 1.038636 1.248372 1.843045 1.93095 ABN09154.1 RNA-directed DNA polymerase (Reverse transcriptase) [Medicago truncatula] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN34490_c0_g1_i1 4.635337761 0 9.270675522 Inf Inf 0.000867218 0.004599638 Up 0 0 0 0.7551225 1.800614 1.361851 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34493_c0_g1_i1 2.870995527 5.741991055 0 0 #NAME? 0.022050925 0.073319488 Down 1.080815 0.5221084 1.018857 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34495_c0_g1_i1 3.96697014 7.93394028 0 0 #NAME? 0.004330442 0.018756846 Down 0.710809 1.722742 1.612962 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34499_c0_g1_i1 20.21208876 40.42417752 0 0 #NAME? 3.68E-13 7.37E-12 Down 7.298506 7.595094 4.805026 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34503_c0_g1_i1 52.23173979 73.01131016 31.45216941 0.430784893 -1.214960438 0.000815898 0.004361287 Down 10.69707 10.69314 8.299009 3.528324 2.141389 4.822467 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34506_c0_g1_i1 17.93759681 28.99272415 6.882469475 0.237386092 -2.074692684 0.02776485 0.088549837 Down 4.335705 6.00018 2.197081 0 2.353353 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34508_c0_g1_i1 7.206190827 0.984156182 13.42822547 13.64440493 3.770237571 0.002240353 0.010606629 Up 0 0 0.4494374 1.515057 1.510234 1.981008 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZKXC Chitin binding Peritrophin-A domain -- PF01607.23 Chitin binding Peritrophin-A domain TRINITY_DN34512_c0_g1_i1 5.367898814 0 10.73579763 Inf Inf 0.000317136 0.001881655 Up 0 0 0 2.375185 0.9015142 0.9818063 AOQ13929.1 Atet-PC [synthetic construct] Q7XA72|AB21G_ARATH ABC transporter G family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCG21 PE=2 SV=2 cre:CHLREDRAFT_143982 K05681 ABCG2 "ATP-binding cassette, subfamily G (WHITE), member 2" ko02010 ABC transporters KOG0061 "Transporter, ABC superfamily (Breast cancer resistance protein)" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1131 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: transmembrane transport (GO:0055085);" -- -- TRINITY_DN34513_c0_g1_i1 2.869655575 5.73931115 0 0 #NAME? 0.026353876 0.084794548 Down 1.665404 1.613899 0 0 0 0 OMO95972.1 reverse transcriptase [Corchorus olitorius] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34520_c0_g1_i1 7.53861734 15.07723468 0 0 #NAME? 2.35E-05 0.000177148 Down 1.691937 3.585487 3.375066 0 0 0 AIC49637.1 "RPS3, partial [synthetic construct]" Q9SIP7|RS31_ARATH 40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1 adl:AURDEDRAFT_115951 K02985 "RP-S3e, RPS3" small subunit ribosomal protein S3e ko03010 Ribosome KOG3181 40S ribosomal protein S3 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0092 "Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (By similarity)" Molecular Function: damaged DNA binding (GO:0003684);|Molecular Function: mRNA binding (GO:0003729);|Molecular Function: structural constituent of ribosome (GO:0003735);|Molecular Function: DNA-(apurinic or apyrimidinic site) endonuclease activity (GO:0003906);|Cellular Component: nucleus (GO:0005634);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Biological Process: DNA repair (GO:0006281);|Biological Process: translation (GO:0006412);|Molecular Function: oxidized purine nucleobase lesion DNA N-glycosylase activity (GO:0008534);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: chloroplast (GO:0009507);|Biological Process: response to salt stress (GO:0009651);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic ribosome (GO:0022626);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Molecular Function: oxidized purine DNA binding (GO:0032357);|Biological Process: positive regulation of DNA repair (GO:0045739); PF00189.19 "Ribosomal protein S3, C-terminal domain" TRINITY_DN34523_c0_g1_i1 35.65425257 57.49449131 13.81401382 0.240266737 -2.057291163 0.001082149 0.00559986 Down 11.29393 17.74564 7.4375 2.001756 2.047652 3.016166 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34524_c0_g1_i1 5.167093717 0 10.33418743 Inf Inf 0.000361375 0.002114074 Up 0 0 0 2.411293 1.586969 0.8791623 KZV55291.1 pleiotropic drug resistance protein 2-like [Dorcoceras hygrometricum] Q2PCF1|PDR2_NICPL Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia OX=4092 GN=PDR2 PE=2 SV=1 -- -- -- -- -- -- KOG0065 "Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG0842 (ABC) transporter Molecular Function: ATP binding (GO:0005524);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity (GO:0016887); PF01061.23 ABC-2 type transporter TRINITY_DN34527_c0_g1_i1 4.286287397 0 8.572574795 Inf Inf 0.001548589 0.007686726 Up 0 0 0 1.801255 0.9067629 1.509925 XP_020552731.1 putative late blight resistance protein homolog R1B-16 isoform X1 [Sesamum indicum] Q6L438|R1A6_SOLDE Putative late blight resistance protein homolog R1A-6 OS=Solanum demissum OX=50514 GN=R1A-6 PE=3 SV=2 sind:105171600 K13457 "RPM1, RPS3" disease resistance protein RPM1 ko04626 Plant-pathogen interaction KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Molecular Function: ADP binding (GO:0043531); -- -- TRINITY_DN34530_c0_g1_i1 2.770552754 0 5.541105508 Inf Inf 0.017124205 0.059455335 Up 0 0 0 0.9423601 0.7217164 0.4953208 KYP70042.1 hypothetical protein KK1_009250 [Cajanus cajan] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN34533_c0_g1_i1 3.867894195 7.735788389 0 0 #NAME? 0.004731947 0.020227636 Down 0.6684168 1.293962 2.037926 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3453_c0_g1_i1 13.03510028 22.37191492 3.698285638 0.165309302 -2.596760188 0.012561264 0.046031601 Down 0.5282198 2.812054 2.182104 0.09838326 0.3976723 0.2100169 XP_024013156.1 uncharacterized protein LOC112087471 [Eutrema salsugineum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YFHW transposon protein -- -- -- TRINITY_DN34540_c0_g1_i1 5.407499194 10.81499839 0 0 #NAME? 0.000684701 0.003729826 Down 1.602344 3.951063 1.260369 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34541_c0_g1_i1 3.835998082 7.309760928 0.362235236 0.049555004 -4.33482543 0.020985255 0.070441743 Down 0.6552049 1.617838 1.714847 0 0.2112116 0 AAX42698.1 "profilin 1, partial [synthetic construct]" -- -- -- -- -- -- -- -- KOG1755 Profilin [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton O ENOG41126PD "Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (By" -- PF00235.18 Profilin TRINITY_DN34543_c0_g1_i1 3.645238176 7.290476352 0 0 #NAME? 0.007374461 0.029519302 Down 2.044259 0.678053 1.295667 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34546_c0_g1_i1 13.44975923 24.19900003 2.700518427 0.111596282 -3.163639135 0.000305925 0.001822903 Down 6.792801 4.610086 2.645678 0 0 1.350527 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34553_c0_g1_i1 4.732332491 9.464664982 0 0 #NAME? 0.043666654 0.127281861 Down 0.8997453 4.367631 0.5794329 0 0 0 XP_023914298.1 uncharacterized protein LOC112025844 [Quercus suber] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34555_c0_g1_i1 4.129775922 8.259551843 0 0 #NAME? 0.003453102 0.01542023 Down 0.7870521 1.526499 1.43186 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34560_c0_g1_i1 10.67958377 1.573970267 19.78519726 12.57024842 3.651941257 8.14E-05 0.000550448 Up 0.135841 0.394114 0 1.271737 1.721014 2.326407 AOQ03105.1 "RpL17-RB, partial [synthetic construct]" Q6MY48|RL17_ASPFU 60S ribosomal protein L17 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=rpl17 PE=3 SV=1 tcc:TCM_014624 K02880 "RP-L17e, RPL17" large subunit ribosomal protein L17e ko03010 Ribosome KOG3353 60S ribosomal protein L22 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0091 "The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome (By similarity)" Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF00237.18 Ribosomal protein L22p/L17e TRINITY_DN34563_c0_g1_i1 17.40455114 34.44686704 0.362235236 0.010515767 -6.571302077 4.32E-10 6.41E-09 Down 4.440705 3.590096 7.059541 0 0.1698437 0 AAX43301.1 "ribosomal protein L30, partial [synthetic construct]" O49884|RL30_LUPLU 60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1 ppp:PHYPADRAFT_207769 K02908 "RP-L30e, RPL30" large subunit ribosomal protein L30e ko03010 Ribosome KOG2988 60S ribosomal protein L30 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1911 (ribosomal) protein Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412); PF01248.25 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TRINITY_DN3456_c0_g1_i1 14.77088931 23.44228171 6.099496898 0.260192117 -1.942350843 0.00598168 0.024695445 Down 4.191015 4.738746 3.688199 0.6964641 0 1.975669 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34572_c0_g1_i1 13.1114406 21.35386599 4.869015208 0.22801563 -2.132795373 0.040762956 0.120426481 Down 6.081543 1.259142 3.643857 1.264168 0 0.80537 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34573_c0_g1_i1 27.46779998 42.34151994 12.59408003 0.297440433 -1.749327319 0.000724703 0.00392512 Down 5.284805 4.138592 3.842574 1.579439 0.8012894 0.7872257 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34575_c0_g1_i1 2.956549586 5.913099172 0 0 #NAME? 0.020478724 0.069073468 Down 0.8558947 1.672778 0.8840398 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34583_c0_g1_i1 38.9706777 77.94135539 0 0 #NAME? 0.001069063 0.005540355 Down 33.6605 6.63835 7.532686 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN34584_c0_g1_i1 6.576863343 13.15372669 0 0 #NAME? 9.01E-05 0.000602933 Down 2.77216 1.095829 3.500184 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3458_c0_g1_i1 20.49307103 40.98614207 0 0 #NAME? 1.15E-10 1.82E-09 Down 6.165842 2.67624 5.802377 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3469_c0_g1_i1 7.402013541 14.07955661 0.724470471 0.051455489 -4.280531204 0.000774657 0.004160438 Down 0.7922849 2.120501 1.519065 5.39E-91 0.2129469 0 XP_024163822.1 uncharacterized protein LOC112170746 [Rosa chinensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3472_c0_g1_i1 6.808040549 13.6160811 0 0 #NAME? 7.34E-05 0.000500707 Down 1.207016 1.007768 1.135056 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3490_c0_g1_i1 5.595942995 0 11.19188599 Inf Inf 0.000191201 0.00119363 Up 0 0 0 1.06786 1.358521 1.69949 AOQ04009.1 "Mf-RK, partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111JGD NA -- PF15929.4 Myofilin TRINITY_DN3497_c0_g1_i1 4.95908696 9.91817392 0 0 #NAME? 0.014950275 0.053205633 Down 3.695134 2.59005 0 0 0 0 XP_014633831.1 peroxisomal (S)-2-hydroxy-acid oxidase GLO1-like isoform X2 [Glycine max] Q9LRS0|GLO2_ARATH (S)-2-hydroxy-acid oxidase GLO2 OS=Arabidopsis thaliana OX=3702 GN=GLO2 PE=1 SV=1 gmx:100777153 K11517 HAO (S)-2-hydroxy-acid oxidase ko00630|ko04146 Glyoxylate and dicarboxylate metabolism|Peroxisome KOG0538 Glycolate oxidase [C] METABOLISM Energy production and conversion C COG1304 "Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) (By similarity)" Cellular Component: peroxisome (GO:0005777);|Molecular Function: glycolate oxidase activity (GO:0008891);|Biological Process: oxidative photosynthetic carbon pathway (GO:0009854);|Molecular Function: FMN binding (GO:0010181);|Molecular Function: very-long-chain-(S)-2-hydroxy-acid oxidase activity (GO:0052852);|Molecular Function: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity (GO:0052853);|Molecular Function: medium-chain-(S)-2-hydroxy-acid oxidase activity (GO:0052854); "PF01070.17,PF00478.24" FMN-dependent dehydrogenase|IMP dehydrogenase / GMP reductase domain TRINITY_DN3522_c0_g1_i1 28.85438177 49.47241356 8.236349986 0.16648369 -2.586547244 7.85E-07 7.66E-06 Down 8.608432 9.115743 9.209278 0.9161902 0.9119182 1.662153 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3523_c0_g1_i1 17.36539976 27.08694193 7.643857588 0.282197142 -1.82522472 0.008747261 0.034079856 Down 4.734025 7.362624 3.603625 1.146833 2.283025 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3549_c0_g1_i1 8.026847516 13.88028362 2.173411413 0.156582637 -2.675003849 0.011952481 0.044189523 Down 2.738662 3.161462 2.13976 0 0.9778836 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN354_c0_g1_i1 8.350325453 16.70065091 0 0 #NAME? 6.99E-06 5.82E-05 Down 2.389432 2.367821 3.408035 0 0 0 PIN22815.1 [histone H3]-lysine-36 demethylase [Handroanthus impetiginosus] Q336N8|JM706_ORYSJ Lysine-specific demethylase JMJ706 OS=Oryza sativa subsp. japonica OX=39947 GN=JMJ706 PE=2 SV=1 -- -- -- -- -- -- KOG1246 "DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain" [R] POORLY CHARACTERIZED General function prediction only S ENOG41104I0 jumonji domain protein "Cellular Component: heterochromatin (GO:0000792);|Molecular Function: DNA-binding transcription repressor activity, RNA polymerase II-specific (GO:0001227);|Molecular Function: chromatin binding (GO:0003682);|Cellular Component: nucleus (GO:0005634);|Molecular Function: histone demethylase activity (GO:0032452);|Molecular Function: histone demethylase activity (H3-K9 specific) (GO:0032454);|Molecular Function: histone demethylase activity (H3-trimethyl-K4 specific) (GO:0034647);|Molecular Function: methylated histone binding (GO:0035064);|Cellular Component: histone methyltransferase complex (GO:0035097);|Biological Process: positive regulation of gene expression, epigenetic (GO:0045815);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: flower morphogenesis (GO:0048439);|Molecular Function: dioxygenase activity (GO:0051213);" -- -- TRINITY_DN3554_c0_g1_i1 13.27881559 25.78605448 0.771576693 0.029922247 -5.062637668 4.98E-07 5.00E-06 Down 2.781697 3.683946 2.134502 0 0 0.1750249 XP_022158942.1 uncharacterized protein LOC111025397 [Momordica charantia] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN3555_c0_g1_i1 5.347728769 0.984156182 9.711301355 9.867642483 3.302705446 0.019885332 0.06748317 Up 0 0 0.6146186 0.4219611 2.072271 2.2336 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3558_c0_g1_i1 15.10890296 27.99728828 2.220517635 0.079311882 -3.656319165 0.000306678 0.001826431 Down 2.601178 7.441006 4.030155 0 0.5819016 0.3400902 XP_022899131.1 cysteine-rich and transmembrane domain-containing protein WIH2-like isoform X1 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZBZ5 NA -- -- -- TRINITY_DN3560_c0_g1_i1 17.76645148 34.78487938 0.748023582 0.021504274 -5.539232755 9.09E-10 1.30E-08 Down 1.858944 1.109786 2.043966 0 0.0525456 0.05457914 XP_012844644.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN3562_c0_g1_i1 13.61502862 6.78331757 20.44673967 3.014268381 1.591807875 0.025873665 0.083533661 Up 0.5553117 1.080057 0.5186088 0.9382401 2.332751 2.080161 XP_006361833.1 PREDICTED: hypersensitive-induced response protein 2 [Solanum tuberosum] Q6ZIV7|HIR1_ORYSJ Hypersensitive-induced response protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIR1 PE=1 SV=1 -- -- -- -- -- -- KOG2620 Prohibitins and stomatins of the PID superfamily [C] METABOLISM Energy production and conversion O COG0330 Band 7 protein Cellular Component: plasma membrane (GO:0005886); -- -- TRINITY_DN3581_c0_g1_i1 3.32328736 6.64657472 0 0 #NAME? 0.010642511 0.040057672 Down 1.205652 0.7814965 2.187155 0 0 5.82E-100 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3592_c0_g1_i1 11.48340018 18.1371601 4.829640251 0.26628426 -1.908960943 0.022943673 0.075716623 Down 1.351562 1.809833 0.6806419 0.2870344 0.236221 0.2754239 KZV22433.1 peroxidase 64 [Dorcoceras hygrometricum] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF00665.25 Integrase core domain TRINITY_DN3598_c0_g1_i1 8.661401723 16.55122675 0.771576693 0.046617493 -4.422984776 0.000199312 0.001239533 Down 2.493187 1.841317 1.163491 0 0 0.2153925 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3614_c0_g1_i1 29.70286975 5.58284602 53.82289347 9.640762664 3.26914728 5.70E-07 5.68E-06 Up 0.4832628 0.3510668 0.8205935 4.999811 5.38303 2.577136 GAU32064.1 hypothetical protein TSUD_214200 [Trifolium subterraneum] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); PF13456.5 Reverse transcriptase-like TRINITY_DN3615_c0_g1_i1 3.868673597 7.737347193 0 0 #NAME? 0.004728619 0.020217217 Down 1.806099 0.3559548 2.577603 0 0 0 XP_011081395.1 phosphatidylinositol/phosphatidylcholine transfer protein SFH11 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN361_c0_g1_i2 22.30963461 34.80812215 9.811147066 0.281863728 -1.826930261 0.00475521 0.020315599 Down 5.333568 2.591994 3.210651 1.109348 0 1.395281 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3621_c0_g1_i1 6.025042709 11.27850872 0.771576693 0.068411233 -3.869622948 0.004352212 0.018829224 Down 2.198962 0.5745884 1.650717 0 0 0.2129475 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3649_c0_g1_i1 9.324305744 17.1838487 1.464762789 0.085240671 -3.552314245 0.000606749 0.003351062 Down 1.283157 2.075932 1.956726 0.2315657 0.1154337 0 PIM98588.1 hypothetical protein CDL12_28927 [Handroanthus impetiginosus] Q9FJV7|MCU4_ARATH "Calcium uniporter protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g42610 PE=2 SV=1" -- -- -- -- -- -- KOG2966 Uncharacterized conserved protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y3YU Coiled-coil domain containing 109B Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Molecular Function: uniporter activity (GO:0015292);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: mitochondrial calcium ion homeostasis (GO:0051560); PF04678.12 Mitochondrial calcium uniporter TRINITY_DN3650_c0_g1_i1 8.419641475 3.108933677 13.73034927 4.416417556 2.14287658 0.020565582 0.069325223 Up 0.362847 0.4748475 0.09300929 1.157682 1.151557 1.06959 POS81923.1 "hypothetical protein EPUL_006794, partial [Erysiphe pulchra]" Q9UV33|H1_ASCIM Histone H1 OS=Ascobolus immersus OX=5191 PE=3 SV=1 gmx:100785055 K11275 H1_5 histone H1/5 -- -- KOG4012 Histone H1 [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics B ENOG41120CT histone h1 Cellular Component: nucleosome (GO:0000786);|Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: nucleosome assembly (GO:0006334); PF00538.18 linker histone H1 and H5 family TRINITY_DN3652_c0_g1_i1 328.9828227 193.0859635 464.8796818 2.407630639 1.267614082 1.79E-14 3.95E-13 Up 17.84207 13.55448 16.24665 27.90274 35.00605 29.69226 ATE50910.1 universal stress protein 4 [Salvia miltiorrhiza] Q8LGG8|USPAL_ARATH Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- T COG0589 Universal stress protein Cellular Component: plasma membrane (GO:0005886);|Molecular Function: AMP binding (GO:0016208); PF00582.25 Universal stress protein family TRINITY_DN3663_c0_g1_i1 5.790859051 11.5817181 0 0 #NAME? 0.000349433 0.00205437 Down 2.918378 2.327923 1.800381 0 0 0 XP_019161862.1 PREDICTED: uncharacterized protein LOC109158407 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF13963.5 Transposase-associated domain TRINITY_DN3666_c0_g1_i1 5.186743678 10.37348736 0 0 #NAME? 0.000701742 0.003812113 Down 1.010904 1.961835 2.445215 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3677_c0_g1_i1 22.77478352 40.75402779 4.795539242 0.117670314 -3.087177695 7.20E-07 7.06E-06 Down 2.306644 1.751261 1.753798 0.1341115 0.2694716 0.141955 XP_012844633.1 PREDICTED: uncharacterized protein LOC105964676 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z0ZI Conserved gene of -- PF10536.8 Plant mobile domain TRINITY_DN3681_c0_g1_i1 78.27968453 156.5593691 0 0 #NAME? 3.26E-49 3.47E-47 Down 30.33432 26.22978 33.4693 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3684_c0_g1_i1 12.98296038 24.86866715 1.097253604 0.044121931 -4.502360273 2.20E-06 2.00E-05 Down 3.571021 3.101563 5.117269 0.3071815 0.1538749 0 AIC63163.1 "RPS17, partial [synthetic construct]" Q9P7J6|RS17B_SCHPO 40S ribosomal protein S17-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rps1702 PE=1 SV=1 cme:CYME_CMT402C K02962 "RP-S17e, RPS17" small subunit ribosomal protein S17e ko03010 Ribosome KOG0187 40S ribosomal protein S17 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1383 Ribosomal protein Biological Process: cytoplasmic translational elongation (GO:0002182);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic small ribosomal subunit (GO:0022627);|Biological Process: ribosome biogenesis (GO:0042254); PF00833.17 Ribosomal S17 TRINITY_DN3692_c0_g1_i1 9.143434069 4.147177407 14.13969073 3.409473322 1.769548896 0.047167677 0.135246186 Up 0.6375458 0.08963392 0.2775919 0.9584026 0.8679145 1.029696 XP_012851331.1 PREDICTED: beta-galactosidase 15-like [Erythranthe guttata] Q9C6W4|BGA15_ARATH Beta-galactosidase 15 OS=Arabidopsis thaliana OX=3702 GN=BGAL15 PE=2 SV=1 -- -- -- -- -- -- KOG0496 Beta-galactosidase [G] METABOLISM Carbohydrate transport and metabolism G COG1874 beta-galactosidase Molecular Function: beta-galactosidase activity (GO:0004565);|Biological Process: carbohydrate metabolic process (GO:0005975);|Molecular Function: carbohydrate binding (GO:0030246);|Cellular Component: apoplast (GO:0048046); PF01301.18 Glycosyl hydrolases family 35 TRINITY_DN3695_c0_g1_i1 9.522211836 19.04442367 0 0 #NAME? 1.40E-06 1.31E-05 Down 1.285736 1.611112 1.589244 0 0 0 SJX34940.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" Q96TJ5|RLA0_NEUCR 60S acidic ribosomal protein P0 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=p0 PE=2 SV=1 pco:PHACADRAFT_171498 K02941 "RP-LP0, RPLP0" large subunit ribosomal protein LP0 ko03010 Ribosome KOG0815 60S acidic ribosomal protein P0 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0244 50s ribosomal protein L10 "Biological Process: ribosomal large subunit assembly (GO:0000027);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Cellular Component: preribosome, large subunit precursor (GO:0030687);|Molecular Function: large ribosomal subunit rRNA binding (GO:0070180);" "PF00466.19,PF00428.18" Ribosomal protein L10|60s Acidic ribosomal protein TRINITY_DN3698_c0_g1_i1 4.111672386 0 8.223344773 Inf Inf 0.002069593 0.009923421 Up 0 0 0 1.182244 0.7085772 1.302797 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3698_c0_g2_i1 5.649711501 0.246039046 11.05338396 44.92532447 5.489457018 0.000884943 0.004682935 Up 0 0 0.1343676 1.50438 1.344161 0.5630495 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41105M9 NA -- PF00431.19 CUB domain TRINITY_DN3705_c0_g1_i1 15.58093416 31.16186831 0 0 #NAME? 2.51E-10 3.82E-09 Down 4.621142 6.550121 4.217686 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN371_c0_g1_i1 14.04705866 25.13330737 2.960809953 0.117804231 -3.085536737 0.000114834 0.000750889 Down 4.224051 2.077702 2.994599 0.3043752 0.3004867 0.2887677 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3730_c0_g1_i1 5.561223237 11.12244647 0 0 #NAME? 0.000464177 0.002643713 Down 1.670301 2.703664 1.72682 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3738_c0_g1_i1 19.00058296 7.029356615 30.9718093 4.406066017 2.139491111 0.000569572 0.003171174 Up 0.4072907 0.9255583 0.5223751 1.54063 2.206083 2.815846 PIN12702.1 hypothetical protein CDL12_14687 [Handroanthus impetiginosus] Q05091|PGIP_PYRCO Polygalacturonase inhibitor OS=Pyrus communis OX=23211 GN=PGIP PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YB0Y polygalacturonase inhibiting protein Cellular Component: cell wall (GO:0005618);|Cellular Component: apoplast (GO:0048046); "PF08263.11,PF13855.5,PF12799.6,PF00560.32" Leucine rich repeat N-terminal domain|Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat TRINITY_DN3747_c0_g1_i1 38.43815224 1.116257443 75.76004703 67.86969036 6.084695526 1.27E-13 2.64E-12 Up 0 0.1456216 0.1133997 4.82334 8.0405 4.658061 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF01395.21 PBP/GOBP family TRINITY_DN3748_c0_g1_i1 18.8213372 34.66358528 2.979089115 0.085942902 -3.540477696 6.72E-07 6.61E-06 Down 2.105921 3.594317 2.455801 0.1056392 0.2114553 0.235509 XP_020547739.1 uncharacterized protein LOC105159950 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4112DAU NA -- -- -- TRINITY_DN3750_c0_g1_i1 6.025065963 11.68789669 0.362235236 0.030992337 -5.011944633 0.001240738 0.006323726 Down 0.7725946 2.270653 1.920348 0 0.1812904 0 PIN21743.1 Pectinesterase [Handroanthus impetiginosus] Q9SB37|PMEI7_ARATH Pectinesterase inhibitor 7 OS=Arabidopsis thaliana OX=3702 GN=PMEI7 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YPKA Invertase pectin methylesterase inhibitor family protein Molecular Function: enzyme inhibitor activity (GO:0004857);|Biological Process: shade avoidance (GO:0009641);|Biological Process: negative regulation of catalytic activity (GO:0043086);|Cellular Component: apoplast (GO:0048046); PF04043.14 Plant invertase/pectin methylesterase inhibitor TRINITY_DN3765_c0_g1_i1 23.78007521 47.56015042 0 0 #NAME? 2.27E-15 5.39E-14 Down 4.437267 4.664768 2.890168 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3785_c0_g1_i1 11.83767013 20.02661817 3.648722099 0.182193622 -2.45645564 0.010624529 0.040009891 Down 2.794384 2.022984 6.024237 0.7509974 0.7569591 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3786_c0_g1_i2 16.17150421 26.79417165 5.548836773 0.207091186 -2.271661946 0.001127134 0.005802224 Down 6.137102 3.778567 4.760306 0.5723404 1.144261 0.6100991 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3796_c0_g1_i1 13.61890005 26.51332964 0.724470471 0.027324764 -5.193647162 2.56E-07 2.68E-06 Down 2.959436 3.819161 3.654021 8.28E-55 0.187581 0 XP_011088663.1 rop guanine nucleotide exchange factor 1 [Sesamum indicum] Q93ZY2|ROGF1_ARATH Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF1 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4110DIX rop guanine nucleotide exchange factor Molecular Function: Rho guanyl-nucleotide exchange factor activity (GO:0005089);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: pollen tube growth (GO:0009860);|Cellular Component: apical plasma membrane (GO:0016324);|Biological Process: regulation of pollen tube growth (GO:0080092);|Biological Process: regulation of auxin polar transport (GO:2000012);|Biological Process: positive regulation of Rho guanyl-nucleotide exchange factor activity (GO:2001108); -- -- TRINITY_DN3802_c0_g1_i1 7.018944345 13.30287032 0.735018369 0.055252615 -4.177813451 0.001509953 0.007523744 Down 4.113103 2.019485 1.575932 0.3994624 0.000151745 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3805_c0_g1_i1 11.35864179 22.71728358 0 0 #NAME? 4.64E-07 4.68E-06 Down 4.060456 1.442852 4.247293 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3812_c0_g1_i1 24.36381175 48.7276235 0 0 #NAME? 6.42E-06 5.38E-05 Down 3.189755 14.93448 9.450123 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3815_c0_g1_i1 15.35439854 30.70879708 0 0 #NAME? 3.61E-10 5.40E-09 Down 1.975729 3.173355 1.776727 0 0 0 PRQ50126.1 "putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Rosa chinensis]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3818_c0_g1_i1 9.607949329 0 19.21589866 Inf Inf 0.000563942 0.003142915 Up 7.20E-81 0 0 0.4433384 2.838615 1.496946 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN382_c0_g1_i1 9.352146097 16.81190879 1.892383409 0.112562079 -3.151207212 0.001480068 0.007388622 Down 1.656932 1.739121 1.710028 0.1445887 0 0.3020914 XP_011088795.1 E3 ubiquitin-protein ligase MIEL1 [Sesamum indicum] Q9FFB6|ZFP34_ARATH E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana OX=3702 GN=RZPF34 PE=1 SV=1 sind:105169945 K10144 "RCHY1, PIRH2" RING finger and CHY zinc finger domain-containing protein 1 ko04120 Ubiquitin mediated proteolysis KOG1940 Zn-finger protein [R] POORLY CHARACTERIZED General function prediction only S ENOG410XXHF ring finger and CHY zinc finger Cellular Component: nucleus (GO:0005634);|Cellular Component: endoplasmic reticulum (GO:0005783);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transferase activity (GO:0016740);|Biological Process: regulation of stomatal opening (GO:1902456); PF05495.11 CHY zinc finger TRINITY_DN3837_c0_g1_i2 7.131985058 1.628057814 12.6359123 7.761341267 2.956305992 0.005648415 0.023516328 Up 0.5404602 0 0 1.65835 0.834733 1.08336 XP_011076592.1 tRNA (guanine(26)-N(2))-dimethyltransferase [Sesamum indicum] -- -- sind:105160800 K00555 "TRMT1, trm1" tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase -- -- KOG1253 tRNA methyltransferase [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1867 Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups (By similarity) -- -- -- TRINITY_DN3850_c0_g1_i1 11.62871492 18.70108634 4.556343511 0.243640579 -2.037173654 0.011760803 0.043596049 Down 4.683869 1.718563 3.206174 0.6285718 0 1.266004 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3855_c0_g1_i1 5.140415328 10.28083066 0 0 #NAME? 0.000862601 0.004578584 Down 3.042287 1.176657 1.886524 0.003657842 0 4.76E-65 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3857_c0_g1_i1 4.402858741 8.805717482 0 0 #NAME? 0.002300158 0.01085016 Down 1.534498 1.120087 1.919278 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3865_c0_g1_i1 12.23640054 24.47280107 0 0 #NAME? 2.40E-05 0.000180962 Down 5.47535 1.241643 4.972434 0 0 0 PIN24595.1 hypothetical protein CDL12_02669 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZEXG NA -- -- -- TRINITY_DN3889_c0_g1_i1 8.357865798 16.7157316 0 0 #NAME? 6.94E-06 5.78E-05 Down 3.885462 1.488221 4.24393 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3897_c0_g1_i1 35.23061171 70.46122343 0 0 #NAME? 1.02E-22 3.91E-21 Down 14.74775 12.56225 15.89066 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3898_c0_g1_i1 18.76375239 34.6296229 2.897881884 0.083682167 -3.578935979 0.009120735 0.03530464 Down 5.058837 13.57619 3.828985 0 1.555503 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3903_c0_g1_i1 10.58868162 21.17736324 0 0 #NAME? 0.00042231 0.002430879 Down 3.530674 4.704478 0.6036146 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN390_c0_g1_i1 7.63925209 15.27850418 0 0 #NAME? 2.15E-05 0.000163414 Down 2.935822 1.564573 2.668347 0 0 0 XP_012847744.1 PREDICTED: uncharacterized N-acetyltransferase ycf52 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3926_c0_g1_i2 23.45104528 11.71226056 35.18983001 3.004529299 1.587138991 0.002942726 0.013435842 Up 0.8386865 1.641201 0.5420192 2.512914 1.543374 3.364552 XP_012834931.1 PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform X1 [Erythranthe guttata] Q9SE43|REV_ARATH Homeobox-leucine zipper protein REVOLUTA OS=Arabidopsis thaliana OX=3702 GN=REV PE=1 SV=2 sind:105166610 K09338 HD-ZIP homeobox-leucine zipper protein -- -- -- -- -- -- -- -- -- -- Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Molecular Function: lipid binding (GO:0008289);|Biological Process: determination of bilateral symmetry (GO:0009855);|Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);|Biological Process: radial pattern formation (GO:0009956);|Biological Process: meristem initiation (GO:0010014);|Biological Process: xylem and phloem pattern formation (GO:0010051);|Biological Process: xylem development (GO:0010089);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: transcription regulatory region DNA binding (GO:0044212); -- -- TRINITY_DN3928_c0_g1_i1 5.561783788 11.12356758 0 0 #NAME? 0.001506563 0.007507674 Down 0.3072253 2.676302 2.618472 8.21E-84 1.52E-98 0 PIM98950.1 hypothetical protein CDL12_28560 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3929_c0_g1_i1 16.88394096 33.76788192 0 0 #NAME? 3.50E-11 5.89E-10 Down 2.88597 3.91748 3.064975 0 0 0 AAX29353.1 "ribosomal protein L9, partial [synthetic construct]" P49210|RL9_ORYSJ 60S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 SV=3 mus:104001009 K02940 "RP-L9e, RPL9" large subunit ribosomal protein L9e ko03010 Ribosome KOG3255 60S ribosomal protein L9 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0097 "This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center (By similarity)" Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF00347.22 Ribosomal protein L6 TRINITY_DN393_c0_g1_i1 14.85405358 1.628057814 28.08004936 17.24757506 4.108321634 6.79E-05 0.000467191 Up 0.9802402 0 0 2.783501 7.433551 4.021866 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3940_c0_g1_i1 9.122378017 17.08739099 1.15736504 0.06773211 -3.884016258 0.028254013 0.089813333 Down 6.434339 3.592642 0.4110475 0 0 0.5779299 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3947_c0_g1_i1 12.41905144 24.83810289 0 0 #NAME? 2.06E-05 0.000157674 Down 1.023937 1.237569 2.9424 0 0 0 PIN01374.1 putative transporter ADD1 (major facilitator superfamily) [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG2816 Predicted transporter ADD1 (major facilitator superfamily) [R] POORLY CHARACTERIZED General function prediction only G ENOG410ZVCA solute carrier family 46 -- "PF07690.15,PF00083.23,PF12832.6" Major Facilitator Superfamily|Sugar (and other) transporter|MFS_1 like family TRINITY_DN3954_c0_g2_i1 9.106045515 18.21209103 0 0 #NAME? 3.05E-06 2.71E-05 Down 4.273984 4.167775 2.520518 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3958_c0_g1_i1 5.224629833 1.222873734 9.226385932 7.5448394 2.915490192 0.024013813 0.078591133 Up 0.2940045 0 0.11308 1.040477 1.02274 0.5170475 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3959_c0_g1_i1 14.17786013 22.88527409 5.470446174 0.239037826 -2.064689161 0.005068294 0.02142931 Down 3.046717 4.879108 4.808553 1.204046 1.23631 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3966_c0_g1_i1 17.03910815 6.184623187 27.89359311 4.5101524 2.173176184 0.000903833 0.00476955 Up 0.1839037 0.8928653 0.3532976 1.718387 1.56382 1.825269 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3975_c0_g1_i1 31.37318604 12.49010277 50.2562693 4.023687412 2.008518231 6.85E-05 0.000470686 Up 0.9553825 1.383486 4.632374 6.235212 7.651367 8.662481 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3982_c0_g1_i1 10.47294753 16.56742854 4.378466519 0.2642816 -1.919852112 0.027287627 0.087322329 Down 3.123242 1.694309 2.476333 0.732004 0.7189188 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3984_c0_g1_i1 5.571827905 1.46891278 9.674743031 6.586329129 2.719474607 0.029613934 0.093228747 Up 0.5390289 0 0.2098098 0.567633 1.69697 1.490346 PIN00806.1 hypothetical protein CDL12_26691 [Handroanthus impetiginosus] O65543|PP343_ARATH "Pentatricopeptide repeat-containing protein At4g31070, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E7 PE=3 SV=2" -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- "PF13041.5,PF01535.19,PF13812.5" PPR repeat family|PPR repeat|Pentatricopeptide repeat domain TRINITY_DN3992_c0_g1_i1 11.95176347 21.62535519 2.278171756 0.105347253 -3.246775405 0.00023333 0.001426469 Down 2.1859 4.2625 2.045927 0.2359064 0 0.4931637 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN3995_c0_g1_i1 9.798486993 16.6990921 2.897881884 0.173535296 -2.52669897 0.006218707 0.025506983 Down 1.955821 3.844393 4.114835 0 1.471489 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4003_c0_g1_i1 4.482781059 8.603326882 0.362235236 0.042104088 -4.569895861 0.010371178 0.039228305 Down 1.031686 2.312005 1.005345 0 0.1987302 0 XP_011072155.1 uncharacterized protein LOC105157445 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y9G4 NA -- -- -- TRINITY_DN4051_c0_g1_i1 6.295679627 12.59135925 0 0 #NAME? 0.000160585 0.00101936 Down 1.843792 2.335338 1.714404 0 0 0 KZV25427.1 hypothetical protein F511_19807 [Dorcoceras hygrometricum] Q39529|LEC2_CLAKE Agglutinin-2 OS=Cladrastis kentukea OX=38412 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase Molecular Function: mannose binding (GO:0005537);|Molecular Function: metal ion binding (GO:0046872); PF00139.18 Legume lectin domain TRINITY_DN4056_c0_g1_i1 17.7174285 7.562000367 27.87285663 3.685910511 1.882021045 0.003071249 0.013946898 Up 1.03478 0.9885459 0.982702 3.554544 2.308386 2.823755 XP_011070374.1 UPF0160 protein C27H6.8 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG2948 Predicted metal-binding protein [R] POORLY CHARACTERIZED General function prediction only S COG5210 TBC1 domain family member -- -- -- TRINITY_DN4057_c0_g1_i1 7.99810782 15.99621564 0 0 #NAME? 0.006295275 0.025758078 Down 5.762426 0.8046543 1.963858 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4066_c0_g1_i1 10.90567467 2.771359031 19.03999031 6.870271985 2.780367215 0.001097836 0.005670659 Up 1.191219 0 0.3085439 2.919206 2.117408 3.449827 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4079_c0_g1_i1 5.190824717 10.38164943 0 0 #NAME? 0.014001434 0.050460717 Down 2.039285 3.633353 0.1560166 0 0 0 KZV51625.1 hypothetical protein F511_24998 [Dorcoceras hygrometricum] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L ENOG410XP5C Transposase Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN4084_c0_g1_i1 5.68781921 0.984156182 10.39148224 10.55877352 3.400370359 0.013163689 0.047952759 Up 0 0 0.3479092 0.817555 1.296493 1.121164 ACL90966.1 PyK-PB [synthetic construct] P46614|KPYK_CANAL Pyruvate kinase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CDC19 PE=1 SV=3 fme:FOMMEDRAFT_106158 K00873 "PK, pyk" pyruvate kinase ko00620|ko00230|ko00010 Pyruvate metabolism|Purine metabolism|Glycolysis / Gluconeogenesis KOG2323 Pyruvate kinase [G] METABOLISM Carbohydrate transport and metabolism G COG0469 Pyruvate kinase Molecular Function: magnesium ion binding (GO:0000287);|Molecular Function: pyruvate kinase activity (GO:0004743);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: glycolytic process (GO:0006096);|Biological Process: cellular response to starvation (GO:0009267);|Cellular Component: cell surface (GO:0009986);|Molecular Function: kinase activity (GO:0016301);|Cellular Component: yeast-form cell wall (GO:0030445);|Cellular Component: hyphal cell wall (GO:0030446);|Biological Process: filamentous growth (GO:0030447);|Molecular Function: potassium ion binding (GO:0030955);|Biological Process: cellular response to insulin stimulus (GO:0032869);|Biological Process: filamentous growth of a population of unicellular organisms in response to starvation (GO:0036170);|Biological Process: filamentous growth of a population of unicellular organisms in response to biotic stimulus (GO:0036180);|Biological Process: induction by symbiont of host defense response (GO:0044416); PF02887.15 "Pyruvate kinase, alpha/beta domain" TRINITY_DN40_c0_g1_i1 9.218082798 18.4361656 0 0 #NAME? 0.000562471 0.003136842 Down 4.487833 3.095566 0.6979072 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4105_c0_g1_i1 10.10528239 20.21056478 0 0 #NAME? 0.000103173 0.000682406 Down 5.315624 1.277882 3.234705 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4107_c0_g1_i1 2.954228792 5.908457583 0 0 #NAME? 0.01886593 0.064601499 Down 1.263706 0.8109538 1.651051 0 0 0 XP_022876705.1 uncharacterized protein LOC111394888 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein -- -- -- TRINITY_DN4124_c0_g1_i1 9.859803894 19.71960779 0 0 #NAME? 2.40E-06 2.17E-05 Down 5.442837 1.770622 4.976023 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4127_c0_g1_i1 6.979333394 11.39665039 2.562016393 0.224804333 -2.15325825 0.04429114 0.128606649 Down 0.6450513 2.230896 2.577877 0.6690787 0.3293785 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4145_c0_g1_i1 31.39388776 48.16844332 14.6193322 0.303504353 -1.720210889 0.00024823 0.001509634 Down 5.103167 3.174885 5.166904 0.2978849 1.204887 1.74782 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4152_c0_g1_i1 33.62984059 60.16487438 7.094806793 0.117922739 -3.084086152 1.25E-08 1.56E-07 Down 1.411575 2.500904 2.630057 0.2859157 0.09429696 0.2377633 XP_011089081.1 "putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial [Sesamum indicum]" Q9LJR6|PP253_ARATH "Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E96 PE=3 SV=1" -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- "PF14432.5,PF01535.19,PF13041.5,PF12854.6,PF13812.5,PF17177.3" DYW family of nucleic acid deaminases|PPR repeat|PPR repeat family|PPR repeat|Pentatricopeptide repeat domain|Pentacotripeptide-repeat region of PRORP TRINITY_DN4168_c0_g1_i1 8.316932211 0 16.63386442 Inf Inf 2.30E-06 2.08E-05 Up 0 0 0 4.320493 2.388894 1.777308 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4169_c0_g1_i1 8.160098757 14.13096425 2.18923326 0.154924549 -2.690362329 0.011287933 0.042078766 Down 2.480024 3.8761 1.500054 0.4329425 0.4329294 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4176_c0_g1_i1 2.191870234 0 4.383740468 Inf Inf 0.042410645 0.124353891 Up 0 0 0 1.123292 0.7704518 2.53E-26 PIN07495.1 Non-specific serine/threonine protein kinase [Handroanthus impetiginosus] A5PHT0|Y1448_ARATH Uncharacterized protein At1g24485 OS=Arabidopsis thaliana OX=3702 GN=RWK1 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YADS NA Cellular Component: integral component of membrane (GO:0016021); PF12819.6 Carbohydrate-binding protein of the ER TRINITY_DN4185_c0_g1_i1 4.243932558 8.487865117 0 0 #NAME? 0.025372687 0.082186362 Down 3.528907 9.00E-88 1.81815 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4186_c0_g1_i1 2.624956482 5.249912963 0 0 #NAME? 0.032324158 0.100252151 Down 0.9211658 0.5051628 0.6950131 0 0 0 XP_011087856.1 uncharacterized protein LOC105169210 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG4688 Putative beta-catenin-Tcf/Lef signaling pathway component DRCTNNB1A [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S ENOG410ZXRB "Family with sequence similarity 126, member" -- -- -- TRINITY_DN4193_c0_g1_i1 7.241823402 0 14.4836468 Inf Inf 1.34E-05 0.00010573 Up 0 0 0 1.276718 1.138517 1.187955 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN41_c0_g1_i1 8.424031865 1.222873734 15.62519 12.77743528 3.675526379 0.000541556 0.003029684 Up 0.3475641 0 0.0863127 0.9686215 1.40147 1.427746 XP_015936923.1 transcription factor bHLH147 [Arachis duranensis] O80482|BH149_ARATH Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YRF4 Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN4205_c0_g1_i1 10.59369923 18.26842078 2.918977679 0.159782705 -2.645816841 0.002856606 0.013112539 Down 2.190903 3.687377 4.683483 0.7171863 0.7172442 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4206_c0_g1_i1 3.824447189 7.648894378 0 0 #NAME? 0.005333894 0.02239584 Down 0.9868987 1.440731 1.706436 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4210_c0_g1_i1 37.03746335 12.51798713 61.55693957 4.917479058 2.297918909 1.73E-07 1.84E-06 Up 2.314254 2.201718 1.356967 7.848377 8.578303 7.288992 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4211_c0_g1_i1 4.832097566 0 9.664195133 Inf Inf 0.000916567 0.004828893 Up 0 0 0 0.2812084 2.28936 1.782803 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4219_c0_g1_i2 24.09270939 34.67598607 13.5094327 0.389590441 -1.359969815 0.012287336 0.045206602 Down 2.352821 3.035451 1.771267 0.7792158 0.3353125 1.08673 XP_022877588.1 cyclic nucleotide-gated ion channel 4-like [Olea europaea var. sylvestris] Q94AS9|CNGC4_ARATH Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana OX=3702 GN=CNGC4 PE=2 SV=2 -- -- -- -- -- -- KOG0498 "K+-channel ERG and related proteins, contain PAS/PAC sensor domain" [PT] METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Signal transduction mechanisms U ENOG410XPSE "Potassium voltage-gated channel, subfamily H (Eag-related), member" Molecular Function: ion channel activity (GO:0005216);|Molecular Function: calmodulin binding (GO:0005516);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: cation transmembrane transporter activity (GO:0008324);|Biological Process: plant-type hypersensitive response (GO:0009626);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: cAMP binding (GO:0030552);|Molecular Function: cGMP binding (GO:0030553); -- -- TRINITY_DN421_c0_g1_i2 5.942356384 0 11.88471277 Inf Inf 0.001173092 0.006012893 Up 0 0 0 0.350361 2.492251 1.886675 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4220_c0_g1_i1 24.09759955 39.94830122 8.246897884 0.206439264 -2.276210706 5.71E-05 0.000399476 Down 2.455769 2.338441 1.928731 0.4106979 0.2031493 0.5274576 XP_011095298.1 putative beta-glucosidase 41 isoform X1 [Sesamum indicum] Q9FIU7|BGL41_ARATH Putative beta-glucosidase 41 OS=Arabidopsis thaliana OX=3702 GN=BGLU41 PE=3 SV=2 sind:105174799 K01188 E3.2.1.21 beta-glucosidase ko00940|ko00460|ko00500 Phenylpropanoid biosynthesis|Cyanoamino acid metabolism|Starch and sucrose metabolism KOG0626 "Beta-glucosidase, lactase phlorizinhydrolase, and related proteins" [G] METABOLISM Carbohydrate transport and metabolism G COG2723 beta-glucosidase Biological Process: carbohydrate metabolic process (GO:0005975);|Molecular Function: beta-glucosidase activity (GO:0008422);|Cellular Component: plant-type cell wall (GO:0009505);|Molecular Function: scopolin beta-glucosidase activity (GO:0102483); -- -- TRINITY_DN4241_c0_g1_i1 6.863143877 12.99654333 0.72974442 0.056149116 -4.154592879 0.001672333 0.008230752 Down 1.866008 2.12447 1.429 0.1441106 0.1438234 0 PIN23893.1 hypothetical protein CDL12_03404 [Handroanthus impetiginosus] Q9SGU2|SAU71_ARATH Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1 nnu:104599158 K14488 SAUR SAUR family protein ko04075 Plant hormone signal transduction -- -- -- -- -- S ENOG410YIHK auxin-responsive protein Cellular Component: cytoplasm (GO:0005737);|Biological Process: multicellular organism development (GO:0007275);|Biological Process: auxin-activated signaling pathway (GO:0009734);|Biological Process: regulation of growth (GO:0040008); PF02519.13 Auxin responsive protein TRINITY_DN4246_c0_g1_i1 6.668064732 11.15217015 2.183959311 0.195832675 -2.352306595 0.035491833 0.107966812 Down 0.8546126 0.8218064 1.563395 0.2094085 0.3136045 0 XP_011069775.1 uncharacterized protein LOC105155581 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XSBQ NA -- -- -- TRINITY_DN424_c0_g1_i1 4.902678618 9.805357236 0 0 #NAME? 0.001371484 0.006907332 Down 1.644416 2.437691 0.6291913 0 0 0 PIN08613.1 Spermine oxidase [Handroanthus impetiginosus] Q9FNA2|PAO1_ARATH Polyamine oxidase 1 OS=Arabidopsis thaliana OX=3702 GN=PAO1 PE=1 SV=1 sind:105169299 K13366 "MPAO, PAO1" polyamine oxidase ko00330|ko00410 Arginine and proline metabolism|beta-Alanine metabolism KOG0029 Amine oxidase [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " S ENOG410XSNC amine oxidase Biological Process: polyamine catabolic process (GO:0006598);|Molecular Function: oxidoreductase activity (GO:0016491);|Biological Process: spermine catabolic process (GO:0046208);|Molecular Function: polyamine oxidase activity (GO:0046592);|Molecular Function: flavin adenine dinucleotide binding (GO:0050660);|Molecular Function: norspermine:oxygen oxidoreductase activity (GO:0052894);|Molecular Function: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity (GO:0052895);|Molecular Function: spermine:oxygen oxidoreductase (spermidine-forming) activity (GO:0052901); -- -- TRINITY_DN4270_c0_g1_i1 13.81789374 27.63578747 0 0 #NAME? 2.91E-09 3.94E-08 Down 4.287301 4.843485 4.226577 0 0 6.52E-62 ATO94411.1 "ubiquitin A-52 residue ribosomal protein fusion product 1, partial [synthetic construct]" P0CH35|RL40B_ORYSJ Ubiquitin-60S ribosomal protein L40-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Ub-CEP52-2 PE=3 SV=1 pbn:PADG_07891 K02927 "RP-L40e, RPL40" large subunit ribosomal protein L40e ko03010 Ribosome KOG0003 Ubiquitin/60s ribosomal protein L40 fusion [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1552 Ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: modification-dependent protein catabolic process (GO:0019941);|Molecular Function: protein tag (GO:0031386);|Molecular Function: ubiquitin protein ligase binding (GO:0031625); "PF00240.22,PF01020.16,PF11976.7,PF14560.5" Ubiquitin family|Ribosomal L40e family|Ubiquitin-2 like Rad60 SUMO-like|Ubiquitin-like domain TRINITY_DN4283_c0_g1_i1 5.143540606 0 10.28708121 Inf Inf 0.000367533 0.002145501 Up 0 0 0 2.571089 2.07692 0.5697209 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4283_c0_g2_i1 4.296655636 0 8.593311273 Inf Inf 0.001537266 0.007641174 Up 0 0 0 0.8878762 1.354553 1.857231 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4290_c0_g1_i1 26.7309131 47.19625022 6.265575979 0.132755801 -2.913153197 2.09E-07 2.21E-06 Down 2.982197 2.271315 3.051107 0.3473219 0.3421322 0.1438518 XP_022843315.1 "stomatin-like protein 2, mitochondrial [Olea europaea var. sylvestris]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4291_c0_g1_i1 80.43359901 18.42912462 142.4380734 7.728965773 2.950275377 2.77E-20 9.24E-19 Up 2.99303 2.032019 3.710879 20.02802 18.38415 16.5972 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4296_c0_g1_i2 26.06185269 38.73695286 13.38675252 0.345580938 -1.532904452 0.005785649 0.024006211 Down 2.851631 6.023642 4.337002 2.126039 0.5345128 1.083936 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4299_c0_g1_i1 16.41011959 29.08257858 3.737660595 0.128518886 -2.959947717 0.003512424 0.015642053 Down 1.34023 3.361574 5.319418 0.4389754 0.2182261 0.48804 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4318_c0_g1_i1 28.58677661 16.33491139 40.83864184 2.500083464 1.321976259 0.006253933 0.025612125 Up 1.159459 0.5334877 0.8371761 1.059152 2.26727 1.819027 XP_012853543.1 PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like [Erythranthe guttata] O14244|YELD_SCHPO Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC6F6.13c PE=3 SV=1 -- -- -- -- -- -- KOG2385 Uncharacterized conserved protein [S] POORLY CHARACTERIZED Function unknown S ENOG410YB1Z transmembrane and coiled-coil Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: hydrolase activity (GO:0016787); PF05277.11 Protein of unknown function (DUF726) TRINITY_DN4337_c0_g1_i1 5.728469168 11.45693834 0 0 #NAME? 0.000339219 0.002002099 Down 1.62307 1.26928 1.861189 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4342_c0_g1_i1 21.14525759 42.29051518 0 0 #NAME? 9.14E-14 1.92E-12 Down 6.607936 8.712915 5.191943 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4350_c0_g1_i1 27.0326899 52.13643808 1.928941734 0.036997958 -4.756410552 1.29E-12 2.47E-11 Down 11.62899 13.95524 7.709796 0 0 0.9118549 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4354_c0_g1_i1 52.2147748 34.48475279 69.9447968 2.02828181 1.020258115 0.005154369 0.021738574 Up 1.404392 1.04147 1.655544 1.918707 2.312264 2.45618 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4356_c0_g1_i1 9.253673743 15.52298442 2.984363064 0.192254465 -2.378910991 0.011157812 0.041682707 Down 1.957282 2.301506 2.377706 0.4401855 0.21841 0.4502437 ASR75372.1 retrotransposon protein [Oryza sativa f. spontanea] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN4366_c0_g1_i1 8.424897271 16.84979454 0 0 #NAME? 8.42E-06 6.91E-05 Down 3.36591 2.947231 1.623469 0 0 0 XP_015066722.1 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940 [Solanum pennellii] C0LGQ9|Y4294_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g20940 OS=Arabidopsis thaliana OX=3702 GN=At4g20940 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN4374_c0_g1_i1 3.862532409 0 7.725064819 Inf Inf 0.002916053 0.013336866 Up 0 0 0 1.677321 1.64101 0.6575392 XP_012841382.1 PREDICTED: LOW QUALITY PROTEIN: plant cysteine oxidase 2 [Erythranthe guttata] -- -- sind:105177220 K10712 ADO cysteamine dioxygenase ko00430 Taurine and hypotaurine metabolism -- -- -- -- -- S ENOG4111Y3H 2-aminoethanethiol -- -- -- TRINITY_DN4376_c0_g1_i1 4.146398005 8.29279601 0 0 #NAME? 0.003702156 0.016382527 Down 1.640999 1.247469 1.031041 0 0 0 PIN20798.1 hypothetical protein CDL12_06522 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YFUQ NA -- -- -- TRINITY_DN4380_c0_g1_i1 8.759105508 14.08267422 3.435536796 0.243954858 -2.03531388 0.028858805 0.09138873 Down 2.945323 1.413774 2.669002 0.2618176 0 1.146799 XP_022843058.1 transcription factor ILI3-like [Olea europaea var. sylvestris] Q9CA64|PRE3_ARATH Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);|Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);|Biological Process: embryonic root morphogenesis (GO:0010086);|Biological Process: regulation of growth (GO:0040008);|Molecular Function: protein dimerization activity (GO:0046983); -- -- TRINITY_DN4384_c0_g1_i1 6.517555653 1.960990871 11.07412043 5.647206521 2.497537392 0.028935212 0.091561944 Up 0.6796064 0 0.5330409 1.35777 2.764779 1.436935 XP_012841929.1 PREDICTED: WEB family protein At1g12150-like [Erythranthe guttata] Q9FWW5|Y1215_ARATH WEB family protein At1g12150 OS=Arabidopsis thaliana OX=3702 GN=At1g12150 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: cytosol (GO:0005829);|Biological Process: chloroplast avoidance movement (GO:0009903);|Biological Process: chloroplast accumulation movement (GO:0009904); -- -- TRINITY_DN4389_c0_g1_i1 24.00175039 48.00350078 0 0 #NAME? 1.14E-15 2.76E-14 Down 2.911914 3.213496 3.189835 0 0 0 AEK66115.1 NADH dehydrogenase subunit 2 (mitochondrion) [Cloning vector pRS316-1B9] P06257|NU2C_MARPO "NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Marchantia polymorpha OX=3197 GN=ndhB PE=3 SV=1" ppp:PhpapaCp003 K05573 ndhB NAD(P)H-quinone oxidoreductase subunit 2 ko00190 Oxidative phosphorylation KOG4668 "NADH dehydrogenase subunits 2, 5, and related proteins" [C] METABOLISM Energy production and conversion C COG1009 subunit l "Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: photosynthesis, light reaction (GO:0019684);|Biological Process: ATP synthesis coupled electron transport (GO:0042773);|Molecular Function: quinone binding (GO:0048038);" -- -- TRINITY_DN4392_c0_g1_i1 34.81079567 47.32675786 22.29483348 0.471083051 -1.085946668 0.023441159 0.077011258 Down 1.04684 2.322391 1.512283 0.5163107 0.694155 0.6641571 AAT38747.2 "Polyprotein, putative [Solanum demissum]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4396_c0_g1_i1 18.51962525 26.29853825 10.74071226 0.408414801 -1.291892945 0.04789475 0.136889962 Down 1.031224 3.404872 2.558135 0.6828918 0.9165198 0.6832436 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN43_c0_g1_i1 2.800504748 5.601009496 0 0 #NAME? 0.025514876 0.082580876 Down 0.6006129 1.016012 0.5731586 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4405_c0_g1_i1 56.79108021 101.2199042 12.36225624 0.122132661 -3.033479034 4.64E-15 1.08E-13 Down 6.03456 4.629241 5.237589 0.2558176 0.5042142 0.7810405 XP_004308482.1 PREDICTED: uncharacterized protein LOC101309403 [Fragaria vesca subsp. vesca] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4407_c0_g1_i1 17.47058168 10.00310625 24.93805711 2.493031314 1.317901004 0.039221023 0.116798523 Up 1.82235 0.3955931 1.549876 2.634161 2.199914 2.641217 XP_011077851.1 uncharacterized protein LOC105161749 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4110M2B NA -- -- -- TRINITY_DN4436_c0_g1_i1 6.635397209 11.45961824 1.811176178 0.158048561 -2.661560191 0.033670816 0.103593557 Down 2.140124 1.050807 4.234925 0 0.9577354 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4465_c0_g1_i1 11.91498241 3.198507593 20.63145723 6.450338674 2.689374911 0.002174385 0.01034502 Up 0 0 1.725188 3.377346 3.901279 1.656066 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4476_c0_g1_i1 5.858958655 10.25842847 1.45948884 0.142272166 -2.813274652 0.029819123 0.093779697 Down 1.986821 1.889577 0.9634474 0.3040178 0.3083981 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4490_c0_g1_i1 15.90192104 28.8848644 2.918977679 0.101055613 -3.306778638 6.52E-05 0.000449591 Down 2.900442 2.421765 5.281145 0.3999065 0.401482 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4525_c0_g1_i1 6.304559925 12.60911985 0 0 #NAME? 0.000253158 0.001537749 Down 3.363627 0.8282847 3.940401 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN453_c0_g1_i1 8.374366469 15.64620538 1.102527553 0.070466131 -3.826926193 0.000795072 0.004261505 Down 1.228221 2.487914 1.246785 0.2904797 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4546_c0_g1_i1 12.89876571 23.86858969 1.928941734 0.080815069 -3.629231855 0.014726778 0.052604034 Down 1.895489 3.691524 9.112696 0 0 0.9817828 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4554_c0_g1_i1 37.95725913 58.45459897 17.45991929 0.298691969 -1.743269645 4.39E-05 0.000314287 Down 4.647128 4.715739 6.64913 0.9298718 1.62014 1.39946 XP_011100304.1 "aconitate hydratase, cytoplasmic [Sesamum indicum]" Q9SIB9|ACO3M_ARATH "Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ACO3 PE=1 SV=2" sind:105178516 K01681 "ACO, acnA" aconitate hydratase ko00630|ko00020 Glyoxylate and dicarboxylate metabolism|Citrate cycle (TCA cycle) KOG0452 RNA-binding translational regulator IRP (aconitase superfamily) [AJ] INFORMATION STORAGE AND PROCESSING|INFORMATION STORAGE AND PROCESSING "RNA processing and modification |Translation, ribosomal structure and biogenesis " C COG1048 aconitate hydratase "Molecular Function: aconitate hydratase activity (GO:0003994);|Molecular Function: copper ion binding (GO:0005507);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: cell wall (GO:0005618);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: cytosol (GO:0005829);|Biological Process: glyoxylate cycle (GO:0006097);|Biological Process: tricarboxylic acid cycle (GO:0006099);|Biological Process: citrate metabolic process (GO:0006101);|Biological Process: isocitrate metabolic process (GO:0006102);|Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to abscisic acid (GO:0009737);|Biological Process: response to cadmium ion (GO:0046686);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);|Biological Process: seedling development (GO:0090351);" -- -- TRINITY_DN4560_c0_g1_i2 3.59193003 7.183860061 0 0 #NAME? 0.007725603 0.030702881 Down 1.148927 0.7345054 1.176543 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN458_c0_g1_i1 9.545750267 2.040563388 17.05093714 8.35599484 3.062811602 0.001267477 0.00644068 Up 0.3991121 0 0.2039804 1.907748 1.308922 1.289976 XP_011097323.1 F-box protein At3g07870-like [Sesamum indicum] Q8GXC7|FBK50_ARATH F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZR4H FBOX -- "PF07734.12,PF08268.11" F-box associated|F-box associated domain TRINITY_DN4596_c0_g1_i1 2.943468438 0.312089676 5.5748472 17.86296577 4.158899725 0.045058201 0.130416817 Up 6.98E-102 0.2596719 0 1.60E-50 1.531323 1.049879 PIN17052.1 hypothetical protein CDL12_10284 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4606_c0_g1_i1 25.70261978 51.40523955 0 0 #NAME? 1.14E-16 2.98E-15 Down 2.176346 2.00629 1.855537 0 0 0 AEK66124.1 NADH dehydrogenase subunit 5 (mitochondrion) [Cloning vector pRS316-1B9] P50365|NU5M_ALLMA NADH-ubiquinone oxidoreductase chain 5 OS=Allomyces macrogynus OX=28583 GN=ND5 PE=3 SV=1 ccp:ChcroMp18 K03883 ND5 NADH-ubiquinone oxidoreductase chain 5 ko00190 Oxidative phosphorylation KOG4668 "NADH dehydrogenase subunits 2, 5, and related proteins" [C] METABOLISM Energy production and conversion C COG1009 subunit l Cellular Component: mitochondrial inner membrane (GO:0005743);|Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: ATP synthesis coupled electron transport (GO:0042773);|Cellular Component: respiratory chain (GO:0070469); -- -- TRINITY_DN4606_c1_g1_i1 9.933377458 19.86675492 0 0 #NAME? 8.24E-07 8.02E-06 Down 1.705455 2.722781 1.818628 0 0 0 AEK66125.1 NADH dehydrogenase subunit 6 (mitochondrion) [Cloning vector pRS316-1B9] -- -- -- -- -- -- -- -- -- -- -- -- -- C ENOG410YP23 Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone -- -- -- TRINITY_DN461_c0_g1_i1 11.01800426 19.80494299 2.231065533 0.112651954 -3.150055753 0.000484457 0.002747263 Down 2.826992 2.071611 3.823893 0.2328366 0.2302934 0.2608315 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN462_c0_g1_i1 12.61147804 5.182741233 20.04021484 3.866721092 1.951110706 0.006436014 0.026268345 Up 1.628665 0.1953969 0 1.560183 2.33934 1.88927 ACL87114.1 "RpL18-PA, partial [synthetic construct]" P42791|RL182_ARATH 60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2 nnu:104609266 K02883 "RP-L18e, RPL18" large subunit ribosomal protein L18e ko03010 Ribosome KOG1714 60s ribosomal protein L18 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1727 Ribosomal protein Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: translation (GO:0006412);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: large ribosomal subunit (GO:0015934);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF17135.3 Ribosomal protein 60S L18 and 50S L18e TRINITY_DN4631_c0_g1_i1 5.96718672 11.93437344 0 0 #NAME? 0.000275523 0.001658575 Down 1.992167 1.074178 0.969362 0 0 0 XP_021847320.1 uncharacterized protein LOC110787063 [Spinacia oleracea] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN4647_c0_g1_i1 16.06013186 24.67095296 7.449310763 0.301946616 -1.72763459 0.026561888 0.085360974 Down 3.979922 1.185632 3.384838 1.205668 0.200395 0.6530776 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4651_c0_g1_i1 8.430352348 13.5141064 3.3465983 0.24763741 -2.013698822 0.039806817 0.118163148 Down 2.195475 3.769633 2.28623 0.5557265 0.5502629 0.5717916 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4655_c0_g1_i1 16.50657835 27.77944894 5.23370776 0.188402145 -2.408112706 0.000421875 0.00242899 Down 2.938652 2.392128 3.99265 0.3494491 0.3530248 0.601573 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4662_c0_g1_i1 12.53263155 23.59522636 1.470036737 0.062302294 -4.004570897 1.58E-05 0.000123523 Down 3.994254 5.099837 4.111985 0.6271828 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4670_c0_g1_i2 7.044437306 14.08887461 0 0 #NAME? 5.49E-05 0.000385403 Down 2.624691 0.9249211 1.678836 0 0 3.91E-65 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4674_c0_g1_i1 31.6569724 49.66480276 13.64914204 0.274825254 -1.863413513 0.000114807 0.000750816 Down 2.514298 2.105073 2.066808 0.4480394 0.7157343 0.3474744 XP_010044171.1 PREDICTED: putative nuclease HARBI1 isoform X1 [Eucalyptus grandis] -- -- -- -- -- -- -- -- KOG4585 Predicted transposase [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG411206Y transposon protein -- "PF13359.5,PF04827.13" DDE superfamily endonuclease|Plant transposon protein TRINITY_DN4680_c0_g1_i2 75.74419222 101.6150868 49.87329758 0.490806032 -1.026775115 0.000670442 0.003661376 Down 9.328869 7.121927 6.814308 2.901469 2.890965 3.386056 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4693_c0_g1_i1 13.34808579 24.01393232 2.682239265 0.111695129 -3.162361825 0.000112986 0.000740517 Down 2.751239 3.007379 2.477997 0.1445593 2.92E-14 0.6273822 PIN23700.1 hypothetical protein CDL12_03574 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4694_c0_g1_i1 74.69845622 149.3969124 0 0 #NAME? 1.19E-46 1.17E-44 Down 28.66515 24.45851 22.09464 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN469_c0_g1_i2 8.808862984 16.1216788 1.496047164 0.092797232 -3.429774421 0.001121167 0.005776746 Down 1.177876 0.961016 1.218588 0 0.1064609 0.112521 XP_020546936.1 uncharacterized protein LOC110011314 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- -- -- TRINITY_DN4706_c0_g1_i1 7.183150187 13.20893533 1.15736504 0.087619858 -3.512598311 0.032581055 0.10088348 Down 2.251568 0.5579388 4.837456 0 0 0.582149 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4723_c0_g1_i2 32.1818801 43.7570634 20.60669681 0.470934181 -1.086402656 0.014226449 0.051094018 Down 1.808468 1.125323 2.108958 0.619654 0.407439 0.9234427 PIN00684.1 Non-specific serine/threonine protein kinase [Handroanthus impetiginosus] O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- "PF08276.10,PF00954.19,PF01453.23" PAN-like domain|S-locus glycoprotein domain|D-mannose binding lectin TRINITY_DN4727_c0_g1_i1 19.859493 31.65242242 8.066563576 0.254848222 -1.972289807 0.001408861 0.007075455 Down 2.727021 1.655821 2.294365 0.8818753 0.4412582 0.09647005 XP_011084885.1 U-box domain-containing protein 1-like [Sesamum indicum] E4NKF8|PUB1_MEDTR U-box domain-containing protein 1 OS=Medicago truncatula OX=3880 GN=PUB1 PE=1 SV=1 -- -- -- -- -- -- KOG0167 FOG: Armadillo/beta-catenin-like repeats [S] POORLY CHARACTERIZED Function unknown S ENOG410XQT6 Ubox domain-containing protein Biological Process: response to molecule of bacterial origin (GO:0002237);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to symbiotic bacterium (GO:0009609);|Biological Process: response to symbiotic fungus (GO:0009610);|Biological Process: nodulation (GO:0009877);|Biological Process: arbuscular mycorrhizal association (GO:0036377);|Molecular Function: ubiquitin protein ligase activity (GO:0061630); -- -- TRINITY_DN4730_c0_g1_i1 31.00669362 0 62.01338725 Inf Inf 4.98E-22 1.85E-20 Up 0 0 0 1.86534 1.951063 1.888558 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN473_c0_g1_i1 4.311069166 0 8.622138333 Inf Inf 0.001521697 0.007573115 Up 0 0 0 0.9999621 0.9683968 2.035442 RII16329.1 Major allergen Alt a 1 [Alternaria sp. MG1] P79085|ALTA1_ALTAL Major allergen Alt a 1 OS=Alternaria alternata OX=5599 GN=ALTA1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111252 NA Cellular Component: extracellular region (GO:0005576); PF16541.4 Alternaria alternata allergen 1 TRINITY_DN4744_c0_g1_i1 15.1556861 30.31137219 0 0 #NAME? 5.07E-10 7.47E-09 Down 5.928805 6.346328 3.854483 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4755_c0_g1_i2 18.89653995 36.27347962 1.519600276 0.041892873 -4.577151362 6.14E-09 7.95E-08 Down 4.78615 6.585655 5.470858 0 0.1855685 0.3920894 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4756_c0_g1_i1 6.501238983 11.91577226 1.086705707 0.091198932 -3.454839257 0.005476395 0.02290941 Down 0.868102 1.691553 2.469716 0 0.3086637 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4772_c0_g1_i1 7.184280353 14.36856071 0 0 #NAME? 0.006551722 0.026677638 Down 4.801743 4.228262 0 0 0 0 KRH13969.1 hypothetical protein GLYMA_15G275600 [Glycine max] P31336|PST2_GOSHI "Photosystem II 5 kDa protein, chloroplastic OS=Gossypium hirsutum OX=3635 GN=PSBT PE=4 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z5TB Photosystem II 5 kDa protein Cellular Component: photosystem II (GO:0009523);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis (GO:0015979); -- -- TRINITY_DN4776_c0_g1_i1 4.252366047 0 8.504732094 Inf Inf 0.005070059 0.021434777 Up 6.68E-100 1.30E-76 2.51E-65 2.800964 0.7852059 0.8498547 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4777_c0_g1_i1 18.16218179 28.4920811 7.832282477 0.27489331 -1.863056299 0.002816284 0.012957589 Down 5.068348 3.055928 6.570139 1.106925 0.8584971 1.327102 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN477_c0_g1_i1 8.74376184 15.94437029 1.543153387 0.096783589 -3.369093745 0.001077962 0.00558074 Down 2.983335 2.213723 4.708409 0 0 0.7495249 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4786_c0_g1_i1 9.786859439 18.48701317 1.086705707 0.058782114 -4.088478958 0.020004041 0.067815044 Down 2.61113 1.091789 7.150141 2.27E-86 0.5786766 1.57E-85 XP_011070841.1 uncharacterized protein LOC105156417 [Sesamum indicum] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN4787_c0_g1_i2 113.3802004 226.7604009 0 0 #NAME? 9.05E-70 1.53E-67 Down 15.99229 18.13731 13.79955 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN479_c0_g1_i1 20.06481644 33.113576 7.016056877 0.211878562 -2.23869047 0.000294219 0.0017599 Down 1.582262 1.443583 1.737812 0.1281497 0.4668756 0.2302658 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4802_c0_g1_i1 7.191601846 14.38320369 0 0 #NAME? 5.27E-05 0.000371832 Down 2.243057 2.563545 0.7721816 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN480_c0_g1_i1 3.585948489 7.171896978 0 0 #NAME? 0.007802297 0.030961592 Down 1.921621 0.184915 1.523138 2.06E-80 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4821_c0_g1_i1 7.152788656 12.44729491 1.8582824 0.149292068 -2.743790578 0.014105136 0.050742942 Down 2.385416 1.324346 2.105645 0 0.3573845 0.3331432 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4821_c0_g2_i1 8.353408238 16.70681648 0 0 #NAME? 0.009967417 0.037945173 Down 0.5562872 5.899719 2.130803 0 5.23E-16 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4825_c1_g1_i1 5.614312531 11.22862506 0 0 #NAME? 0.009807654 0.037471497 Down 0 3.82426 2.651055 0 0 0 PIN24285.1 hypothetical protein CDL12_02995 [Handroanthus impetiginosus] Q3E9N1|PP359_ARATH "Pentatricopeptide repeat-containing protein At4g39952, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E98 PE=2 SV=2" -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN4826_c0_g1_i1 12.63150245 23.01893416 2.244070747 0.097488039 -3.35863097 9.32E-05 0.000621558 Down 2.150757 2.243704 2.51327 0 0.2802271 0.3156866 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN482_c0_g1_i1 53.74298653 22.31406119 85.17191187 3.816961473 1.932424625 8.27E-08 9.22E-07 Up 2.270077 1.66327 1.672766 6.33105 4.961441 5.920278 PIN23997.1 Ubiquitin fusion-degradation protein [Handroanthus impetiginosus] P53044|UFD1_YEAST Ubiquitin fusion degradation protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UFD1 PE=1 SV=1 sita:101762782 K14016 UFD1 ubiquitin fusion degradation protein 1 ko04141 Protein processing in endoplasmic reticulum KOG1816 Ubiquitin fusion-degradation protein [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG5140 Ubiquitin fusion degradation protein "Cellular Component: Doa10p ubiquitin ligase complex (GO:0000837);|Cellular Component: Hrd1p ubiquitin ligase ERAD-L complex (GO:0000839);|Cellular Component: nucleus (GO:0005634);|Biological Process: ubiquitin-dependent ERAD pathway (GO:0030433);|Biological Process: retrograde protein transport, ER to cytosol (GO:0030970);|Molecular Function: polyubiquitin modification-dependent protein binding (GO:0031593);|Cellular Component: VCP-NPL4-UFD1 AAA ATPase complex (GO:0034098);|Molecular Function: ubiquitin binding (GO:0043130);|Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);|Biological Process: negative regulation of telomerase activity (GO:0051974);|Biological Process: nonfunctional rRNA decay (GO:0070651);|Biological Process: cytoplasm protein quality control by the ubiquitin-proteasome system (GO:0071629);|Biological Process: ER-associated misfolded protein catabolic process (GO:0071712);|Biological Process: protein localization to vacuole (GO:0072665);|Biological Process: mitochondria-associated ubiquitin-dependent protein catabolic process (GO:0072671);|Biological Process: positive regulation of protein localization to nucleus (GO:1900182);|Cellular Component: RQC complex (GO:1990112);|Biological Process: ribosome-associated ubiquitin-dependent protein catabolic process (GO:1990116);" PF03152.13 Ubiquitin fusion degradation protein UFD1 TRINITY_DN4855_c0_g1_i2 10.20106287 18.59094956 1.811176178 0.097422467 -3.359601667 0.001792605 0.008744004 Down 3.499095 1.694639 5.504889 0 0.8690583 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4859_c0_g1_i1 8.981997314 2.724592978 15.23940165 5.593276418 2.48369363 0.010721625 0.040295307 Up 3.69E-06 0.3111005 0.4116726 0.8961764 1.237862 1.167576 PIN19661.1 Apoptotic ATPase [Handroanthus impetiginosus] Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana OX=3702 GN=RPM1 PE=1 SV=1 sind:105176898 K13457 "RPM1, RPS3" disease resistance protein RPM1 ko04626 Plant-pathogen interaction KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat -- -- -- TRINITY_DN4863_c0_g1_i2 9.680577469 19.36115494 0 0 #NAME? 1.21E-06 1.15E-05 Down 2.651754 4.571169 2.865347 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN486_c0_g1_i1 15.37426108 30.74852215 0 0 #NAME? 2.35E-10 3.59E-09 Down 3.065794 4.401922 5.575509 0 0 0 SJX26292.1 "unnamed protein product, partial [Human ORFeome Gateway entry vector]" P57728|RL28B_SCHPO 60S ribosomal protein L28-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl2801 PE=1 SV=1 ccp:CHC_T00010205001 K02900 "RP-L27Ae, RPL27A" large subunit ribosomal protein L27Ae ko03010 Ribosome KOG1742 60s ribosomal protein L15/L27 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0200 Binds to the 23S rRNA (By similarity) Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF00828.18 "Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A" TRINITY_DN4882_c0_g1_i1 20.23371154 40.46742308 0 0 #NAME? 3.05E-13 6.16E-12 Down 4.105116 3.543056 3.204173 6.87E-52 7.69E-60 0 XP_011100220.1 transcription factor TCP10-like [Sesamum indicum] O82277|TCP10_ARATH Transcription factor TCP10 OS=Arabidopsis thaliana OX=3702 GN=TCP10 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG41118FR TCP family transcription factor "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: leaf morphogenesis (GO:0009965);|Biological Process: cell differentiation (GO:0030154);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Biological Process: positive regulation of development, heterochronic (GO:0045962);|Biological Process: leaf development (GO:0048366);" PF03634.12 TCP family transcription factor TRINITY_DN488_c0_g1_i1 7.406138939 12.62304462 2.18923326 0.173431476 -2.527562339 0.022732341 0.07518159 Down 2.230695 3.174886 1.288558 0.5252932 0.5240274 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4890_c0_g1_i1 4.256199005 0.325611563 8.186786448 25.14280014 4.652073426 0.007196139 0.028915138 Up 0.05362072 0 0 0.808929 0.3773753 0.6265298 -- -- -- -- -- -- -- -- -- -- KOG3634 Troponin [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z ENOG410XS6A Troponin T type -- PF00992.19 Troponin TRINITY_DN4890_c0_g2_i1 5.240210366 0 10.48042073 Inf Inf 0.000343038 0.002022274 Up 0 0 0 0.6670192 0.9975267 1.50896 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- Z ENOG410XS6A Troponin T type -- -- -- TRINITY_DN4903_c0_g2_i1 8.45748368 14.60023728 2.31473008 0.15854058 -2.657075939 0.007283894 0.029200547 Down 1.672591 1.476461 2.017641 0 0 0.6537038 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4909_c0_g1_i1 9.195935721 17.28934389 1.102527553 0.063769196 -3.970996506 0.000316349 0.001877862 Down 3.553722 2.741085 1.929875 0.4377265 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4911_c0_g1_i1 15.992717 1.722273319 30.26316068 17.57163648 4.135176653 5.53E-07 5.52E-06 Up 0 0 1.034142 3.951211 3.950479 6.249581 PIN02254.1 hypothetical protein CDL12_25229 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z44T NA -- -- -- TRINITY_DN4912_c0_g1_i1 6.674599336 13.34919867 0 0 #NAME? 9.76E-05 0.000648331 Down 2.803501 2.332942 1.79655 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN491_c0_g1_i1 6.865990283 13.73198057 0 0 #NAME? 8.28E-05 0.00055938 Down 2.566193 3.398868 1.013969 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4930_c0_g1_i1 16.82258948 26.9231553 6.722023659 0.249674438 -2.001879973 0.00282148 0.012974215 Down 2.637308 3.861478 2.673693 0.6719943 0.4049542 0.7637065 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4930_c0_g2_i1 51.44676069 1.143301217 101.7502202 88.9968616 6.475682556 6.85E-31 3.98E-29 Up 0.1739668 0 0.1339865 9.488702 9.394599 9.175918 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN4931_c0_g1_i1 14.37063859 4.804163223 23.93711395 4.982577161 2.316892147 0.00679481 0.027543918 Up 0.2676258 1.040748 0.8277497 1.193249 3.309928 4.264212 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN493_c0_g1_i1 5.878187304 10.21322122 1.543153387 0.1510937 -2.726484584 0.027298313 0.087344212 Down 1.590303 1.519402 1.429674 0 0 0.5416429 PIN08550.1 Cellulose synthase (UDP-forming) [Handroanthus impetiginosus] Q6YVM4|CESA6_ORYSJ Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica OX=39947 GN=CESA6 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- M COG1215 "Glycosyl transferase, family 2" Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: plant-type primary cell wall biogenesis (GO:0009833);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: cellulose synthase activity (GO:0016759);|Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);|Biological Process: cellulose biosynthetic process (GO:0030244);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: cell wall organization (GO:0071555); PF03552.13 Cellulose synthase TRINITY_DN493_c0_g2_i1 2.920424074 5.840848148 0 0 #NAME? 0.019442369 0.066261295 Down 0.2994449 1.742995 1.655965 0 0 0 PIN08550.1 Cellulose synthase (UDP-forming) [Handroanthus impetiginosus] Q84M43|CESA2_ORYSJ Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica OX=39947 GN=CESA2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- M COG1215 "Glycosyl transferase, family 2" Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: plant-type primary cell wall biogenesis (GO:0009833);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: cellulose synthase activity (GO:0016759);|Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);|Biological Process: cellulose biosynthetic process (GO:0030244);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: cell wall organization (GO:0071555); PF03552.13 Cellulose synthase TRINITY_DN494_c0_g1_i1 14.12014654 2.199708423 26.04058466 11.83819837 3.565377632 6.51E-06 5.45E-05 Up 0.6758319 0 0.1281898 2.86316 2.116378 2.607652 ACG24489.1 60S ribosomal protein L7a [Zea mays] O13672|RL8_SCHPO 60S ribosomal protein L8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl8 PE=1 SV=3 spo:SPBC29A3.04 K02936 "RP-L7Ae, RPL7A" large subunit ribosomal protein L7Ae ko03010 Ribosome KOG3166 60S ribosomal protein L7A [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1358 (ribosomal) protein Biological Process: maturation of LSU-rRNA (GO:0000470);|Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); -- -- TRINITY_DN494_c0_g2_i1 14.21157894 1.872538056 26.55061982 14.17894805 3.825678596 2.11E-06 1.92E-05 Up 0 0.8245519 0 4.11722 3.71298 1.852947 ACG24489.1 60S ribosomal protein L7a [Zea mays] P35685|RL7A1_ORYSJ 60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 PE=2 SV=1 ppp:PHYPADRAFT_190565 K02936 "RP-L7Ae, RPL7A" large subunit ribosomal protein L7Ae ko03010 Ribosome KOG3166 60S ribosomal protein L7A [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG1358 (ribosomal) protein Biological Process: maturation of LSU-rRNA (GO:0000470);|Molecular Function: RNA binding (GO:0003723);|Biological Process: translation (GO:0006412);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); PF01248.25 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TRINITY_DN4959_c0_g1_i1 10.16955536 20.33911073 0 0 #NAME? 5.22E-07 5.23E-06 Down 1.898598 4.339596 3.504782 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN496_c0_g1_i1 12.8954964 25.42875755 0.362235236 0.014245102 -6.133390276 1.25E-07 1.36E-06 Down 1.904508 2.449943 1.849083 0 0.05531011 0 AIC49611.1 "RPL8, partial [synthetic construct]" P0CX45|RL2A_YEAST 60S ribosomal protein L2-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL2A PE=1 SV=1 gsl:Gasu_34490 K02938 "RP-L8e, RPL8" large subunit ribosomal protein L8e ko03010 Ribosome KOG2309 60s ribosomal protein L2/L8 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0090 "One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity" Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: structural constituent of ribosome (GO:0003735);|Molecular Function: rRNA binding (GO:0019843);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625); "PF03947.17,PF00181.22" "Ribosomal Proteins L2, C-terminal domain|Ribosomal Proteins L2, RNA binding domain" TRINITY_DN4974_c0_g1_i1 11.12124105 20.73588704 1.506595062 0.072656408 -3.782766153 0.02235126 0.074176835 Down 7.447112 0.8166706 3.538666 0.3265645 7.04E-31 0.3801417 PIN15726.1 UDP-glucuronosyl and UDP-glucosyl transferase [Handroanthus impetiginosus] Q9FN26|U79B6_ARATH UDP-glycosyltransferase 79B6 OS=Arabidopsis thaliana OX=3702 GN=UGT79B6 PE=2 SV=1 -- -- -- -- -- -- KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase [GC] METABOLISM|METABOLISM Carbohydrate transport and metabolism |Energy production and conversion S COG1819 Transferase Molecular Function: UDP-glycosyltransferase activity (GO:0008194);|Molecular Function: UDP-glucosyltransferase activity (GO:0035251);|Cellular Component: intracellular membrane-bounded organelle (GO:0043231);|Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);|Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044); -- -- TRINITY_DN4977_c0_g1_i1 3.804943761 7.609887522 0 0 #NAME? 0.005427123 0.022734718 Down 1.603405 0.8462887 2.09593 2.90E-72 0 0 PON67746.1 Exonuclease/helicase-like [Parasponia andersonii] Q9SHF3|AGO2_ARATH Protein argonaute 2 OS=Arabidopsis thaliana OX=3702 GN=AGO2 PE=1 SV=1 sbi:SORBI_01g011880 K11593 "ELF2C, AGO" eukaryotic translation initiation factor 2C -- -- KOG1041 Translation initiation factor 2C (eIF-2C) and related proteins [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " -- -- -- Molecular Function: mRNA binding (GO:0003729);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: regulation of translation (GO:0006417);|Biological Process: modulation by virus of host morphology or physiology (GO:0019048);|Biological Process: gene silencing by RNA (GO:0031047);|Molecular Function: siRNA binding (GO:0035197);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: defense response to virus (GO:0051607); -- -- TRINITY_DN4986_c0_g1_i2 11.7661669 19.08075062 4.451583169 0.233302309 -2.099727512 0.011257388 0.041982139 Down 2.641661 4.411625 1.999255 0.2661354 0.7936082 0.5696199 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5013_c0_g1_i1 8.220544987 16.44108997 0 0 #NAME? 8.51E-06 6.98E-05 Down 1.804943 2.0129 2.730453 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5017_c0_g1_i1 5.988809502 11.977619 0 0 #NAME? 0.001920082 0.009285987 Down 3.376612 0.4114453 2.845278 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5020_c0_g1_i1 15.07205673 21.91267811 8.231435355 0.375647162 -1.41254989 0.048804691 0.13896571 Down 2.955181 2.868623 5.839596 2.141591 0 1.422091 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5057_c0_g1_i1 26.15390399 44.11856421 8.189243764 0.185619 -2.429583703 7.12E-06 5.92E-05 Down 1.439101 1.732968 2.135732 0.2208739 0.2851765 0.2864149 XP_011071563.1 isoleucine N-monooxygenase 1-like [Sesamum indicum] Q6J541|C79D3_LOTJA Isoleucine N-monooxygenase 1 OS=Lotus japonicus OX=34305 GN=CYP79D3 PE=1 SV=1 sind:105156979 K12153 CYP79A2 phenylalanine N-monooxygenase ko00460|ko00966 Cyanoamino acid metabolism|Glucosinolate biosynthesis KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Biological Process: cyanogenic glycoside biosynthetic process (GO:0019756);|Molecular Function: heme binding (GO:0020037);|Cellular Component: organelle membrane (GO:0031090);" PF00067.21 Cytochrome P450 TRINITY_DN5068_c0_g1_i1 4.115538019 0 8.231076037 Inf Inf 0.002063952 0.009899511 Up 0 0 0 0.8806591 1.191753 1.94193 XP_021681924.1 uncharacterized protein LOC110665926 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41122DF NA -- -- -- TRINITY_DN5073_c0_g1_i1 6.525875992 13.05175198 0 0 #NAME? 0.000102245 0.000677056 Down 1.562753 1.801233 2.379335 0 0 0 XP_021668493.1 uncharacterized protein LOC110656182 [Hevea brasiliensis] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- PF14244.5 gag-polypeptide of LTR copia-type TRINITY_DN507_c0_g1_i1 4.572923627 8.421376783 0.724470471 0.086027557 -3.539057321 0.020632369 0.069540032 Down 0.9827274 0.9775673 2.784845 0 0.2690627 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5084_c0_g1_i1 5.754785123 1.302446252 10.20712399 7.83688692 2.97028068 0.043218824 0.126227775 Up 0.7666423 0 0 0.783076 0.7614847 3.031086 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5084_c0_g2_i1 7.65704246 0 15.31408492 Inf Inf 0.003219609 0.014516619 Up 2.18E-31 0 0 3.168851 3.873238 1.97E-07 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5100_c0_g1_i1 21.16725733 35.17186517 7.162649493 0.203647133 -2.295856593 0.00011408 0.000746601 Down 3.30955 5.242921 5.1404 0.4831115 0.4857723 1.38821 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5105_c0_g1_i1 7.049078895 14.09815779 0 0 #NAME? 6.50E-05 0.000448486 Down 3.22537 2.695522 0.9135062 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5115_c0_g1_i1 7.693322226 15.38664445 0 0 #NAME? 2.23E-05 0.000169049 Down 2.218083 5.09838 2.329431 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5121_c0_g1_i1 61.78004945 123.5600989 0 0 #NAME? 4.96E-39 3.85E-37 Down 5.677504 7.622137 6.682847 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5123_c0_g1_i1 10.27580431 2.637698967 17.91390965 6.791491325 2.763728407 0.002006481 0.009662656 Up 0.2070467 0.3011212 0.1566741 1.161923 1.032972 1.566819 EES14201.1 hypothetical protein SORBI_3007G195500 [Sorghum bicolor] P25803|CYSEP_PHAVU Vignain OS=Phaseolus vulgaris OX=3885 PE=2 SV=2 -- -- -- -- -- -- KOG1543 Cysteine proteinase Cathepsin L [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG4870 cathepsin Cellular Component: endoplasmic reticulum lumen (GO:0005788);|Molecular Function: cysteine-type peptidase activity (GO:0008234); -- -- TRINITY_DN512_c0_g1_i1 6.785534362 12.46854117 1.102527553 0.088424743 -3.499406063 0.018527749 0.063637268 Down 1.886195 4.3113 0.9579569 0.5525961 0 0 PKA62506.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Apostasia shenzhenica] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN5136_c0_g1_i1 8.563957687 16.01238261 1.115532767 0.069666882 -3.843383198 0.000651719 0.003569868 Down 1.219046 1.579077 0.8907629 0.06302887 0.06290655 0.06376988 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5140_c0_g1_i1 49.61998035 29.1510286 70.0889321 2.404338216 1.265639853 0.000642992 0.003528451 Up 3.346874 4.478228 4.074795 7.171234 6.760557 9.18044 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5148_c0_g1_i1 8.762760646 16.06603245 1.45948884 0.09084314 -3.460478612 0.001151461 0.005913367 Down 1.133767 3.406311 2.440437 0.2246999 0.223861 0 XP_011077233.1 phosphoenolpyruvate carboxylase kinase 2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- T ENOG410XRMJ calcium-dependent protein kinase -- -- -- TRINITY_DN5151_c0_g1_i2 7.994990211 15.98998042 0 0 #NAME? 0.000166953 0.001055206 Down 1.70101 3.565579 1.022634 5.29E-73 5.13E-62 1.20E-62 XP_022889902.1 "28 kDa ribonucleoprotein, chloroplastic-like [Olea europaea var. sylvestris]" P19683|ROC4_NICSY "31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1" -- -- -- -- -- -- KOG0118 FOG: RRM domain [R] POORLY CHARACTERIZED General function prediction only S COG0724 Rna-binding protein Molecular Function: RNA binding (GO:0003723);|Biological Process: mRNA processing (GO:0006397);|Cellular Component: chloroplast (GO:0009507); -- -- TRINITY_DN5163_c1_g1_i1 13.53141947 23.41411684 3.648722099 0.155834283 -2.681915443 0.000867378 0.004599638 Down 5.494077 5.224679 2.85895 0.853039 0.8561515 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5176_c0_g1_i1 30.96157965 61.92315931 0 0 #NAME? 9.92E-07 9.53E-06 Down 7.051155 19.34134 7.856214 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5181_c0_g1_i1 2.925845065 5.851690131 0 0 #NAME? 0.038943121 0.116126519 Down 0.7579817 2.584899 0.2970284 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5190_c0_g1_i1 4.267298173 8.534596347 0 0 #NAME? 0.038577914 0.115238697 Down 1.307147 3.197318 0 0 0 0 ACU14401.1 unknown [Glycine max] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKTH AAI -- -- -- TRINITY_DN519_c0_g1_i1 7.350746881 14.70149376 0 0 #NAME? 0.000803054 0.004300227 Down 1.853433 1.778303 0.2371478 0 0 0 KZV34979.1 peroxidase 64 [Dorcoceras hygrometricum] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN51_c0_g1_i1 5.277517288 10.55503458 0 0 #NAME? 0.000596844 0.003305984 Down 1.464715 0.7012024 2.24226 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5207_c0_g1_i1 6.984130017 12.15180991 1.816450126 0.149479801 -2.741977547 0.017769741 0.061414789 Down 1.449489 2.132521 1.105462 0.1590233 0.4815403 0 XP_023526220.1 expansin-A25-like [Cucurbita pepo subsp. pepo] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN5222_c0_g1_i1 6.120131361 12.24026272 0 0 #NAME? 0.000203585 0.001263859 Down 2.495537 2.036847 2.229021 0 0 0 GAU35033.1 hypothetical protein TSUD_103560 [Trifolium subterraneum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5224_c0_g1_i1 5.202025809 10.40405162 0 0 #NAME? 0.00089252 0.004720832 Down 2.187416 2.131857 0.6788587 8.29E-101 3.64E-98 1.22E-97 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5240_c0_g1_i1 13.75003459 1.968312365 25.53175681 12.97139482 3.697261716 1.76E-05 0.000136134 Up 5.53E-76 4.50E-92 0.4272139 1.680378 1.663441 1.190442 Q49SP7.1 RecName: Full=Gamma-curcumene synthase; AltName: Full=PatTpsA Q49SP7|TPSCS_POGCB Gamma-curcumene synthase OS=Pogostemon cablin OX=28511 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBXH synthase Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: cytosol (GO:0005829);|Molecular Function: sesquiterpene synthase activity (GO:0010334);|Biological Process: terpenoid biosynthetic process (GO:0016114);|Biological Process: farnesyl diphosphate metabolic process (GO:0045338);|Biological Process: sesquiterpene biosynthetic process (GO:0051762);|Molecular Function: gamma-curcumene synthase activity (GO:0102064); "PF01397.20,PF03936.15" "Terpene synthase, N-terminal domain|Terpene synthase family, metal binding domain" TRINITY_DN5246_c0_g1_i1 9.980879114 15.78874575 4.17301248 0.264302975 -1.919735428 0.027933786 0.08898234 Down 2.722082 2.077 2.137218 0 0.3550025 1.061569 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5262_c0_g1_i1 11.47061239 19.60763169 3.333593086 0.170015081 -2.556265372 0.003263601 0.01468087 Down 5.655542 4.056781 2.391627 0.855528 0.4302665 0.4689543 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5263_c0_g1_i1 4.321385721 8.642771442 0 0 #NAME? 0.01966438 0.066883352 Down 3.317385 2.186662 0 0 0 0 KRH49001.1 hypothetical protein GLYMA_07G125500 [Glycine max] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41116G7 NA -- -- -- TRINITY_DN5276_c0_g1_i1 22.18294077 44.36588154 0 0 #NAME? 2.26E-14 4.94E-13 Down 5.239511 4.272044 3.044158 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5276_c0_g2_i1 20.25631517 40.51263033 0 0 #NAME? 3.26E-13 6.54E-12 Down 3.87517 3.305137 2.58475 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5284_c0_g1_i1 8.100088692 14.38900121 1.811176178 0.125872265 -2.98996766 0.03789277 0.113588227 Down 5.38636 0.7298879 2.907944 0 0.8387804 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5287_c0_g1_i1 25.03818044 15.10624014 34.97012074 2.314945375 1.210978151 0.015273728 0.054177778 Up 1.921497 4.175764 1.13116 5.044199 3.756311 4.687921 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5309_c0_g1_i1 16.07606425 28.01813166 4.13399684 0.147547199 -2.760751565 0.002288849 0.01080355 Down 2.848968 9.273361 5.883023 1.070787 0 1.10265 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN531_c0_g1_i1 5.696658047 0 11.39331609 Inf Inf 0.014120091 0.05078869 Up 0 0 0 0.9192922 0.4608477 3.621325 XP_019097310.1 PREDICTED: histone H3-like centromeric protein CSE4 [Camelina sativa] Q9HDN1|H3_MORAP Histone H3 OS=Mortierella alpina OX=64518 GN=H3.1 PE=3 SV=3 -- -- -- -- -- -- KOG1745 Histones H3 and H4 [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics B COG2036 "Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling" Cellular Component: nucleosome (GO:0000786);|Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Molecular Function: protein heterodimerization activity (GO:0046982); -- -- TRINITY_DN5325_c0_g1_i1 17.36236042 27.71112128 7.013599561 0.253096924 -1.98223812 0.003155367 0.014263251 Down 3.650961 6.094916 2.788371 0.9881663 0.9948309 0.5251802 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5330_c0_g1_i1 9.542494667 19.08498933 0 0 #NAME? 1.37E-06 1.29E-05 Down 3.463459 3.125731 3.519262 0 0 0 XP_010260889.1 PREDICTED: uncharacterized protein LOC104599848 [Nelumbo nucifera] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF00665.25 Integrase core domain TRINITY_DN5338_c0_g1_i1 16.91597024 27.15174909 6.680191386 0.246031715 -2.023083797 0.015286226 0.054209974 Down 2.639259 1.965162 5.630399 0.9248202 0.5953471 0.6551767 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5343_c0_g1_i1 9.731147385 16.52222129 2.940073475 0.177946622 -2.490483545 0.006876419 0.027832482 Down 3.381206 1.62501 3.554962 1.275801 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5349_c0_g1_i1 9.966402773 19.93280555 0 0 #NAME? 8.01E-07 7.81E-06 Down 2.039112 3.320774 2.105766 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN535_c0_g1_i1 10.79137294 16.80302849 4.779717395 0.28445571 -1.813724055 0.034108881 0.104607428 Down 2.785751 4.397718 2.55703 0 1.737276 0.5815742 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN536_c0_g1_i1 7.557464208 14.74741923 0.367509184 0.024920237 -5.326538393 0.000168968 0.001067202 Down 2.540759 0.9878123 2.076725 0.1123094 0 1.40E-58 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5377_c0_g1_i1 3.381797645 6.76359529 0 0 #NAME? 0.022636804 0.074928874 Down 6.00E-82 2.241781 1.472111 0 2.11E-89 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN538_c0_g1_i1 7.973165989 15.94633198 0 0 #NAME? 1.47E-05 0.000115812 Down 3.190125 4.099882 2.518714 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5408_c0_g1_i1 3.913101444 7.826202889 0 0 #NAME? 0.005375538 0.022543589 Down 1.573699 2.212743 0.8796228 8.31E-69 3.08E-46 8.72E-79 PIM98437.1 Cytochrome P450 CYP4/CYP19/CYP26 subfamily [Handroanthus impetiginosus] Q9FVS9|C96AF_ARATH Alkane hydroxylase MAH1 OS=Arabidopsis thaliana OX=3702 GN=CYP96A15 PE=2 SV=1 -- -- -- -- -- -- KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [QI] METABOLISM|METABOLISM "Secondary metabolites biosynthesis, transport and catabolism |Lipid transport and metabolism " Q COG2124 Cytochrome p450 Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: wax biosynthetic process (GO:0010025);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: heme binding (GO:0020037);|Molecular Function: midchain alkane hydroxylase activity (GO:0080133); PF00067.21 Cytochrome P450 TRINITY_DN5412_c0_g1_i1 4.809803065 9.619606131 0 0 #NAME? 0.022573031 0.074770694 Down 3.599164 1.938004 7.68E-59 3.16E-62 2.00E-48 7.31E-47 XP_006596932.1 peroxisomal glycolate oxidase isoform X1 [Glycine max] Q9LRR9|GLO1_ARATH (S)-2-hydroxy-acid oxidase GLO1 OS=Arabidopsis thaliana OX=3702 GN=GLO1 PE=1 SV=1 pvu:PHAVU_005G051800g K11517 HAO (S)-2-hydroxy-acid oxidase ko00630|ko04146 Glyoxylate and dicarboxylate metabolism|Peroxisome KOG0538 Glycolate oxidase [C] METABOLISM Energy production and conversion C COG1304 "Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) (By similarity)" Cellular Component: nucleus (GO:0005634);|Cellular Component: peroxisome (GO:0005777);|Molecular Function: glycolate oxidase activity (GO:0008891);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: response to cytokinin (GO:0009735);|Biological Process: oxidative photosynthetic carbon pathway (GO:0009854);|Molecular Function: FMN binding (GO:0010181);|Cellular Component: membrane (GO:0016020);|Cellular Component: cytosolic ribosome (GO:0022626);|Biological Process: defense response to bacterium (GO:0042742);|Cellular Component: apoplast (GO:0048046);|Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);|Molecular Function: very-long-chain-(S)-2-hydroxy-acid oxidase activity (GO:0052852);|Molecular Function: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity (GO:0052853);|Molecular Function: medium-chain-(S)-2-hydroxy-acid oxidase activity (GO:0052854); -- -- TRINITY_DN5424_c0_g1_i1 13.79930644 4.803042122 22.79557075 4.746069299 2.246733166 0.001506236 0.007506872 Up 1.892227 1.243806 0 2.309188 4.100884 5.464998 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN542_c0_g1_i1 78.10828468 154.7335274 1.483041951 0.00958449 -6.705082613 2.79E-43 2.45E-41 Down 5.338121 6.787537 6.385687 0.06917703 0.0340963 0.03838004 AEK66116.1 cytochrome c oxidase subunit I (mitochondrion) [Cloning vector pRS316-1B9] P24794|COX1_BETVU Cytochrome c oxidase subunit 1 OS=Beta vulgaris OX=161934 GN=COX1 PE=3 SV=2 ppp:PhpafMp01 K02256 COX1 cytochrome c oxidase subunit 1 ko00190 Oxidative phosphorylation KOG4769 "Cytochrome c oxidase, subunit I" [C] METABOLISM Energy production and conversion C COG0843 Cytochrome C oxidase subunit I Molecular Function: cytochrome-c oxidase activity (GO:0004129);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: oxidative phosphorylation (GO:0006119);|Biological Process: aerobic respiration (GO:0009060);|Biological Process: electron transport coupled proton transport (GO:0015990);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: heme binding (GO:0020037);|Cellular Component: respiratory chain complex IV (GO:0045277);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN543_c0_g1_i1 5.717268075 11.43453615 0 0 #NAME? 0.000372412 0.00217119 Down 1.014713 1.789143 1.026666 0 0 0 XP_025698578.1 uncharacterized protein LOC112800486 [Arachis hypogaea] -- -- -- -- -- -- -- -- KOG0987 DNA helicase PIF1/RRM3 [D] CELLULAR PROCESSES AND SIGNALING "Cell cycle control, cell division, chromosome partitioning " L COG0507 exodeoxyribonuclease v alpha -- -- -- TRINITY_DN5448_c0_g1_i1 9.183078386 18.36615677 0 0 #NAME? 2.22E-06 2.01E-05 Down 1.186087 2.064241 1.823753 7.17E-76 3.46E-93 1.36E-64 KZV26181.1 hypothetical protein F511_06348 [Dorcoceras hygrometricum] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN5455_c0_g2_i1 35.13842856 18.21629492 52.0605622 2.85791169 1.514961338 0.016935277 0.058944433 Up 1.358603 4.970196 2.122572 4.711174 9.658209 5.013527 EYU44390.1 hypothetical protein MIMGU_mgv1a016982mg [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YVNY Calcium-Binding Protein -- "PF00036.31,PF13202.5,PF13405.5,PF13499.5" EF hand|EF hand|EF-hand domain|EF-hand domain pair TRINITY_DN5469_c0_g1_i1 6.108930269 12.21786054 0 0 #NAME? 0.000223806 0.001373799 Down 1.195295 2.022083 0.8922361 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5471_c0_g1_i1 5.994677622 11.62184606 0.367509184 0.031622273 -4.982915136 0.001269876 0.006448539 Down 0.7492834 1.960938 1.852811 0.1614206 0 0 XP_022899344.1 uncharacterized protein LOC111412647 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- O ENOG41116ZH Domain of unknown function (DUF1985) -- -- -- TRINITY_DN5477_c0_g1_i1 2.326388693 4.652777385 0 0 #NAME? 0.049574353 0.140733497 Down 1.81219 0 1.052926 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5485_c0_g1_i1 16.60964329 32.44770989 0.771576693 0.02377908 -5.394163283 5.47E-09 7.14E-08 Down 4.897499 3.959882 3.923339 0 0 0.2381282 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5485_c0_g2_i1 6.112782417 10.77134994 1.454214891 0.135007673 -2.888886691 0.020880119 0.070140697 Down 1.35563 1.525956 1.371402 0.1553637 0.3154421 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5501_c0_g1_i2 8.402730846 13.88648401 2.918977679 0.21020279 -2.250146278 0.027591565 0.08811481 Down 3.12587 2.610423 1.349141 0.5876591 0.5838922 1.26E-37 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5509_c0_g1_i2 41.4074757 82.81495141 0 0 #NAME? 3.49E-23 1.38E-21 Down 8.966687 15.08943 13.93233 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5536_c0_g1_i1 10.30807587 20.61615174 0 0 #NAME? 2.23E-05 0.000169324 Down 4.990684 3.64425 1.282067 6.67E-71 3.18E-95 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5537_c0_g1_i1 7.731768532 15.46353706 0 0 #NAME? 0.003418615 0.015279817 Down 2.374424 4.971669 0.6166149 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5551_c0_g1_i1 11.80737032 22.51221308 1.102527553 0.048974641 -4.351821274 1.31E-05 0.000103634 Down 3.530776 2.941796 2.296268 0.3555212 0 0 KZV14698.1 "hypothetical protein F511_41680, partial [Dorcoceras hygrometricum]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN5569_c0_g1_i1 5.40064224 10.4337753 0.367509184 0.03522303 -4.827337154 0.00298207 0.01358542 Down 2.002067 0.8934587 1.644034 0.1905985 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN560_c0_g1_i1 15.12568138 0 30.25136277 Inf Inf 4.09E-11 6.83E-10 Up 0 0 0 2.772623 3.668924 1.823776 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5627_c0_g1_i1 8.704083276 15.09343647 2.31473008 0.153360044 -2.70500544 0.008514239 0.033329326 Down 0.7912919 1.295961 2.388049 0 0 0.6039117 XP_021668790.1 uncharacterized protein LOC110656374 [Hevea brasiliensis] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41104TD "CACTA, En Spm sub-class" -- -- -- TRINITY_DN5629_c0_g1_i1 5.704421589 10.30631562 1.102527553 0.106975916 -3.224642065 0.01610721 0.056612819 Down 1.65369 1.150464 1.098346 0.3770011 0 0 XP_016647002.1 PREDICTED: uncharacterized protein LOC107880269 [Prunus mume] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF14244.5,PF14223.5" gag-polypeptide of LTR copia-type|gag-polypeptide of LTR copia-type TRINITY_DN5636_c0_g1_i1 4.309764337 8.619528674 0 0 #NAME? 0.002499642 0.011665082 Down 0.9129821 1.736395 2.454665 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5639_c0_g1_i1 15.39276129 24.10814783 6.677374753 0.276975851 -1.852167901 0.007319762 0.02932496 Down 2.989179 4.005721 3.970403 0.3971776 1.198637 0.822564 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5656_c0_g1_i1 47.02844192 91.5106893 2.546194546 0.027824012 -5.167525713 1.80E-22 6.80E-21 Down 10.36581 12.76076 10.42823 0.1753409 0.52858 1.77E-86 KZV34343.1 hypothetical protein F511_16862 [Dorcoceras hygrometricum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN565_c0_g1_i1 4.625225178 8.093085315 1.15736504 0.143006653 -2.805845833 0.049156359 0.139774155 Down 0.8997456 1.703282 1.345472 0 0 0.475951 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN566_c0_g1_i2 15.48985055 24.92203648 6.057664624 0.243064592 -2.040588349 0.003910062 0.017137149 Down 2.045493 2.075147 1.067763 0.3028268 0.07529016 0.6360056 XP_019262386.1 PREDICTED: BTB/POZ domain-containing protein POB1-like [Nicotiana attenuata] Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: nucleus (GO:0005634);|Biological Process: response to red light (GO:0010114);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: protein homodimerization activity (GO:0042803);|Molecular Function: protein heterodimerization activity (GO:0046982); PF07707.14 BTB And C-terminal Kelch TRINITY_DN5671_c0_g1_i1 13.20091303 26.40182606 0 0 #NAME? 0.000916127 0.004827453 Down 9.837482 2.345184 3.091903 1.30E-97 4.45E-100 1.96E-56 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5673_c0_g1_i1 6.078602391 0.624179352 11.53302543 18.4771018 4.207666578 0.001719614 0.00843328 Up 4.44E-42 0.2839639 0 0.5740234 2.007259 1.773313 XP_012852932.1 PREDICTED: putative late blight resistance protein homolog R1A-10 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- -- -- TRINITY_DN5681_c0_g1_i1 10.05899135 17.88691717 2.231065533 0.124731697 -3.003099963 0.02260417 0.074857451 Down 4.156877 1.747073 0.9033192 0.2807389 0.2170336 0.2126761 CDO97223.1 unnamed protein product [Coffea canephora] Q2KNL5|CADH1_OCIBA Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum OX=39350 GN=CAD1 PE=1 SV=1 pvu:PHAVU_007G039800g K00083 E1.1.1.195 cinnamyl-alcohol dehydrogenase ko00940 Phenylpropanoid biosynthesis KOG0023 "Alcohol dehydrogenase, class V" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " C COG1064 alcohol dehydrogenase Molecular Function: zinc ion binding (GO:0008270);|Biological Process: phenylpropanoid biosynthetic process (GO:0009699);|Molecular Function: cinnamyl-alcohol dehydrogenase activity (GO:0045551);|Molecular Function: sinapyl alcohol dehydrogenase activity (GO:0052747); -- -- TRINITY_DN5689_c0_g1_i1 5.024156748 10.0483135 0 0 #NAME? 0.001038744 0.005401834 Down 2.815883 0.8603036 1.603059 3.13E-15 9.80E-17 1.34E-16 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5699_c0_g1_i1 24.38685308 48.77370616 0 0 #NAME? 1.09E-13 2.29E-12 Down 8.372333 13.46921 7.340054 3.63E-99 1.46E-82 1.21E-77 PIN16004.1 hypothetical protein CDL12_11350 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111ZVS WW domain -- -- -- TRINITY_DN5721_c0_g1_i1 10.84448075 17.659725 4.029236497 0.22815964 -2.131884485 0.01392424 0.050247478 Down 1.443966 2.678843 1.520165 0.3924704 0.5304164 0.1465786 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5731_c0_g1_i1 21.06170473 31.6612679 10.46214157 0.330439754 -1.597540833 0.005880097 0.024353581 Down 3.021617 4.634091 3.545419 0.7516229 0.9147544 1.354181 PIN12132.1 Tub family protein [Handroanthus impetiginosus] Q93VI8|TLP7_ARATH Tubby-like F-box protein 7 OS=Arabidopsis thaliana OX=3702 GN=TULP7 PE=2 SV=1 -- -- -- -- -- -- KOG2502 Tub family proteins [R] POORLY CHARACTERIZED General function prediction only S ENOG410XQFT tubby like protein "Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: cilium (GO:0005929);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Cellular Component: plastid (GO:0009536);|Biological Process: pollen development (GO:0009555);|Biological Process: response to fungus (GO:0009620);|Molecular Function: phosphatidylinositol binding (GO:0035091);|Molecular Function: transcription regulatory region DNA binding (GO:0044212);|Biological Process: protein localization to cilium (GO:0061512);" -- -- TRINITY_DN5743_c0_g2_i1 14.0651323 22.99076928 5.139495315 0.223546035 -2.161356138 0.004181774 0.018192761 Down 3.208864 2.873636 2.244676 0.4044869 0.7823802 0.267553 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5750_c0_g1_i1 9.67037463 19.34074926 0 0 #NAME? 1.82E-05 0.000140795 Down 5.648504 3.992465 1.642173 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5757_c0_g1_i1 4.747918154 9.110047961 0.385788347 0.042347565 -4.561577179 0.024657304 0.080286136 Down 1.90E-46 1.763272 1.631594 5.54E-57 3.48E-55 0.1740318 XP_019427512.1 PREDICTED: formate--tetrahydrofolate ligase-like [Lupinus angustifolius] P28723|FTHS_SPIOL Formate--tetrahydrofolate ligase OS=Spinacia oleracea OX=3562 PE=1 SV=3 tms:TREMEDRAFT_32433 K00288 MTHFD methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase ko00670 One carbon pool by folate -- -- -- -- -- -- -- -- Molecular Function: formate-tetrahydrofolate ligase activity (GO:0004329);|Molecular Function: ATP binding (GO:0005524);|Biological Process: tetrahydrofolate interconversion (GO:0035999); PF01268.18 Formate--tetrahydrofolate ligase TRINITY_DN5760_c0_g1_i1 13.82500353 1.722273319 25.92773374 15.05436649 3.912110093 7.37E-06 6.11E-05 Up 2.81E-80 1.12E-16 0.4780923 1.488333 2.384159 1.6814 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5763_c0_g1_i1 5.614222158 0 11.22844432 Inf Inf 0.000188736 0.001180391 Up 0 0 0 0.7836037 1.279921 1.966492 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN578_c0_g1_i1 13.49926197 26.99852394 0 0 #NAME? 5.38E-09 7.02E-08 Down 7.239245 4.378046 4.242664 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5793_c0_g1_i2 12.75655917 0 25.51311833 Inf Inf 1.87E-09 2.58E-08 Up 0 0 0 1.723573 3.048924 1.800278 ACL88902.1 Mlp84B-PA [synthetic construct] O04193|WLI2A_ARATH LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1 -- -- -- -- -- -- KOG1700 Regulatory protein MLP and related LIM proteins [TZ] CELLULAR PROCESSES AND SIGNALING|CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms |Cytoskeleton S ENOG410Z840 Cysteine and glycine-rich protein 3 (Cardiac LIM protein) Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytoskeleton (GO:0005856);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: actin filament binding (GO:0051015);|Biological Process: actin filament bundle assembly (GO:0051017); PF00412.21 LIM domain TRINITY_DN5797_c0_g1_i1 24.58368243 49.16736486 0 0 #NAME? 3.76E-15 8.82E-14 Down 3.725375 3.522249 1.969356 0 0 0 XP_011098066.1 transcription elongation factor B polypeptide 3 [Sesamum indicum] -- -- sind:105176837 K15077 ELA1 elongin-A -- -- KOG2821 "RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin A" [K] INFORMATION STORAGE AND PROCESSING Transcription K ENOG4110PG3 transcription elongation factor b -- -- -- TRINITY_DN5797_c0_g2_i1 9.244128317 18.48825663 0 0 #NAME? 1.86E-05 0.000143504 Down 2.8128 4.585476 1.3635 0 0 0 PIN12526.1 hypothetical protein CDL12_14863 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5803_c0_g1_i2 8.985924749 17.9718495 0 0 #NAME? 0.000382184 0.002223309 Down 5.049598 0.7731807 3.414034 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN580_c0_g1_i1 6.238710735 12.47742147 0 0 #NAME? 0.000183683 0.001151328 Down 1.531298 2.178922 1.145726 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00946.18 Mononegavirales RNA dependent RNA polymerase TRINITY_DN5829_c0_g1_i1 6.715164996 13.43032999 0 0 #NAME? 0.000153768 0.000980333 Down 3.805579 1.327406 1.672584 0 0 0 XP_019172859.1 PREDICTED: uncharacterized protein LOC109168299 [Ipomoea nil] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN582_c0_g1_i1 5.603549142 11.20709828 0 0 #NAME? 0.014216616 0.051071135 Down 3.126149 1.974716 0 0 0 0 KRH14838.1 hypothetical protein GLYMA_14G052000 [Glycine max] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF07172.10 Glycine rich protein family TRINITY_DN5841_c0_g2_i1 3.899579557 7.799159115 0 0 #NAME? 0.005437725 0.022772825 Down 1.030926 2.259592 0.7936211 0 0 0 GAU34874.1 hypothetical protein TSUD_19540 [Trifolium subterraneum] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG4111MK6 Retrotransposon protein -- -- -- TRINITY_DN5842_c0_g1_i1 8.872547515 17.74509503 0 0 #NAME? 3.44E-06 3.02E-05 Down 3.3613 1.421558 3.140418 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5849_c0_g1_i1 13.76778882 22.90611747 4.629460161 0.202105842 -2.30681707 0.001653929 0.008149892 Down 2.622437 4.473275 5.106779 0 0 2.021743 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN585_c0_g1_i1 19.27694083 38.55388166 0 0 #NAME? 9.79E-13 1.89E-11 Down 4.071239 5.657562 5.373678 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5861_c0_g1_i1 19.66188538 29.77452456 9.54924621 0.32071868 -1.640619711 0.01134787 0.042277895 Down 5.403442 3.442128 2.438127 0.8357634 1.678995 0.4258403 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5871_c0_g1_i1 5.610677251 0.738117137 10.48323737 14.2026744 3.828090714 0.007449519 0.029754161 Up 0 0 0.3130897 1.285596 0.6401534 1.520481 XP_020550650.1 protein QUIRKY [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XRQN Multiple C2 and transmembrane domain-containing protein -- -- -- TRINITY_DN5875_c0_g1_i1 311.76707 191.6354251 431.8987149 2.25375196 1.172328746 2.55E-14 5.55E-13 Up 16.28263 19.82566 19.60819 34.44225 32.34646 34.52039 CAN81015.1 hypothetical protein VITISV_025776 [Vitis vinifera] P80691|LSPI_CARPA Latex serine proteinase inhibitor OS=Carica papaya OX=3649 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YHN1 trypsin and protease inhibitor family protein Kunitz family protein Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867);|Cellular Component: extracellular space (GO:0005615); PF00197.17 Trypsin and protease inhibitor TRINITY_DN5881_c0_g1_i1 6.024346925 0 12.04869385 Inf Inf 0.004869267 0.020730691 Up 0 0 0 2.849092 2.41749 0 OAE31341.1 hypothetical protein AXG93_4510s1170 [Marchantia polymorpha subsp. ruderalis] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 bvg:104905624 K05658 ABCB1 "ATP-binding cassette, subfamily B (MDR/TAP), member 1" ko02010 ABC transporters KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN5881_c1_g1_i1 14.35557234 3.34300964 25.36813505 7.588412173 2.923798042 9.24E-05 0.000616841 Up 0.9741902 0 0.2559909 2.16585 2.490033 3.319637 BAQ19356.1 putative gag-pol polyprotein [Torenia fournieri] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN5892_c0_g1_i1 3.181745251 6.363490502 0 0 #NAME? 0.023080005 0.076083563 Down 1.583955 1.941364 0 0 0 0 XP_003548597.1 "protein CURVATURE THYLAKOID 1A, chloroplastic [Glycine max]" O04616|CUT1A_ARATH "Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG4111YWG NA Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: thylakoid (GO:0009579);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: plastoglobule (GO:0010287);|Cellular Component: integral component of membrane (GO:0016021); PF14159.5 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase TRINITY_DN5895_c0_g1_i1 6.304167842 1.872538056 10.73579763 5.733286751 2.519362437 0.029056555 0.091837083 Up 0 1.049365 0 2.999066 0.9972101 1.032716 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5904_c0_g1_i1 5.775124065 10.77867144 0.771576693 0.071583655 -3.804225989 0.005545529 0.023147422 Down 1.461935 2.091649 2.54619 0 0 0.3867688 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5907_c0_g1_i1 7.584561527 12.17421209 2.994910962 0.2460045 -2.023243387 0.048699147 0.13870869 Down 2.667809 2.05499 2.437269 0.8381887 0 0.4663515 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5909_c0_g1_i1 6.749129525 11.56931732 1.928941734 0.166729089 -2.584422266 0.019751382 0.067108869 Down 1.265475 2.454848 2.638321 0 0 0.8763288 EYU19314.1 "hypothetical protein MIMGU_mgv1a0236892mg, partial [Erythranthe guttata]" Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1 -- -- -- -- -- -- KOG4658 Apoptotic ATPase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms S COG4886 leucine Rich Repeat Molecular Function: ATP binding (GO:0005524);|Biological Process: defense response (GO:0006952);|Molecular Function: ADP binding (GO:0043531); PF00931.21 NB-ARC domain TRINITY_DN5912_c0_g1_i1 8.504862401 13.53762968 3.47209512 0.25647733 -1.963096781 0.043482995 0.126836114 Down 1.054761 2.062928 3.296736 0 0 1.450558 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN591_c0_g1_i1 4.93936468 9.87872936 0 0 #NAME? 0.001217724 0.006219186 Down 0.9869847 1.945155 0.7516442 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN592_c0_g1_i1 17.88305531 5.509473896 30.25663672 5.491746996 2.457265162 0.000160456 0.001018967 Up 1.083723 0.3510765 0.87653 3.714647 4.489081 2.312461 KVI02547.1 Protein of unknown function DUF1666 [Cynara cardunculus var. scolymus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDXA Protein of unknown function (DUF1666) -- -- -- TRINITY_DN5938_c0_g1_i1 19.72134763 29.9092709 9.533424363 0.318744793 -1.64952632 0.037488968 0.112630666 Down 3.73695 6.918051 2.791059 0.5770507 2.41373 0.570829 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5943_c0_g1_i2 8.432218765 16.86443753 0 0 #NAME? 7.06E-06 5.87E-05 Down 1.986488 2.351699 1.998719 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5952_c0_g1_i2 13.51742544 27.03485089 0 0 #NAME? 4.81E-08 5.54E-07 Down 3.847796 3.119854 1.488498 0 0 0 XP_012853271.1 PREDICTED: uncharacterized protein LOC105972835 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5965_c0_g1_i1 48.47598658 13.70565501 83.24631815 6.073866449 2.602615187 1.92E-10 2.97E-09 Up 1.719792 1.248496 3.597544 9.311748 9.297861 13.65834 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5967_c0_g1_i1 9.415181184 16.22405639 2.606305982 0.160644534 -2.638056199 0.006461816 0.026358845 Down 1.344763 1.790655 0.7746772 3.18E-69 0.3011036 0.2105812 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5976_c0_g1_i1 3.980492027 7.960984054 0 0 #NAME? 0.004278861 0.018560547 Down 0.8860315 1.282706 1.53312 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5981_c0_g1_i2 6.766810336 12.43109312 1.102527553 0.088691119 -3.495066549 0.005501808 0.022995836 Down 3.068403 2.606698 1.194096 0.4398648 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5983_c0_g1_i1 9.008309522 18.01661904 0 0 #NAME? 2.81E-06 2.51E-05 Down 3.508651 2.355322 3.792001 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN5983_c0_g2_i1 15.80848758 29.68803343 1.928941734 0.064973712 -3.94400006 0.004745148 0.020278337 Down 7.384819 7.634057 1.005913 0 0 0.7993924 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6012_c0_g1_i1 14.22683025 24.29365324 4.160007267 0.171238439 -2.545921503 0.017917129 0.061834733 Down 4.917483 2.029482 1.615175 0.1779746 0.1774169 0.7472131 XP_011075404.1 condensin complex subunit 1 [Sesamum indicum] O94679|CND1_SCHPO Condensin complex subunit 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cnd1 PE=1 SV=1 -- -- -- -- -- -- KOG0414 "Chromosome condensation complex Condensin, subunit D2" [BD] INFORMATION STORAGE AND PROCESSING|CELLULAR PROCESSES AND SIGNALING "Chromatin structure and dynamics |Cell cycle control, cell division, chromosome partitioning " BD COG5098 "Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity)" "Cellular Component: condensed nuclear chromosome kinetochore (GO:0000778);|Cellular Component: condensed chromosome, centromeric region (GO:0000779);|Cellular Component: nuclear condensin complex (GO:0000799);|Molecular Function: chromatin binding (GO:0003682);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: mitotic chromosome condensation (GO:0007076);|Biological Process: meiotic chromosome condensation (GO:0010032);|Cellular Component: transcriptionally active chromatin (GO:0035327);|Molecular Function: histone binding (GO:0042393);|Biological Process: cell division (GO:0051301);|Biological Process: chromosome separation (GO:0051304);" -- -- TRINITY_DN6017_c0_g1_i1 8.965393743 3.441866734 14.48892075 4.2096112 2.073686992 0.025888646 0.083564196 Up 0.3219387 0.943166 0.749218 2.678808 2.018578 2.186709 XP_010320485.1 AT-hook motif nuclear-localized protein 27 isoform X2 [Solanum lycopersicum] O22130|AHL22_ARATH AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHN4 DNA binding Molecular Function: AT DNA binding (GO:0003680);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: photomorphogenesis (GO:0009640);|Biological Process: skotomorphogenesis (GO:0009647);|Biological Process: flower development (GO:0009908);|Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);|Molecular Function: histone deacetylase binding (GO:0042826);|Molecular Function: protein self-association (GO:0043621); -- -- TRINITY_DN6021_c0_g1_i1 6.939379819 13.87875964 0 0 #NAME? 0.009022302 0.034986275 Down 5.02731 0 3.278317 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6022_c0_g1_i1 7.821172601 1.46891278 14.17343242 9.648927163 3.270368542 0.002446837 0.011451622 Up 0.2694213 0 0.1029796 0.4397391 1.147899 1.255112 XP_012856385.1 PREDICTED: factor of DNA methylation 1-like [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6038_c0_g1_i1 8.606996196 13.86212014 3.351872249 0.241800837 -2.048108858 0.032592082 0.100896977 Down 1.932231 1.668437 2.001196 0.4324804 0.2127996 0.4425366 GAU26746.1 hypothetical protein TSUD_317440 [Trifolium subterraneum] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN604_c0_g1_i1 8.12712036 0 16.25424072 Inf Inf 0.001334755 0.006740296 Up 0 0 0 1.395367 1.410286 5.174529 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6086_c0_g1_i1 2.382578183 4.765156366 0 0 #NAME? 0.0434189 0.126689858 Down 0.7684901 0.7583581 1.210178 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN60_c0_g1_i1 6.661637999 13.323276 0 0 #NAME? 8.35E-05 0.0005632 Down 0.9285102 1.998004 2.012654 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6104_c0_g1_i1 27.08351486 41.95873805 12.20829168 0.290959458 -1.781109951 0.000601167 0.003324653 Down 4.039974 2.577831 3.216378 1.188737 0.6380104 0.5010613 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6118_c0_g1_i1 9.488625971 18.97725194 0 0 #NAME? 1.70E-06 1.57E-05 Down 3.279096 2.671953 2.068073 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6129_c0_g1_i1 15.85049649 31.70099297 0 0 #NAME? 4.14E-09 5.50E-08 Down 3.682826 5.116249 8.223665 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6148_c0_g1_i1 5.602445602 0 11.2048912 Inf Inf 0.000190319 0.001188822 Up 0 0 0 0.8863575 1.445014 1.915775 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6148_c1_g1_i1 3.213815562 0 6.427631125 Inf Inf 0.012658015 0.046344999 Up 0 0 0 0.3335591 0.6723513 2.05825 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6149_c0_g1_i1 2.714171287 5.428342575 0 0 #NAME? 0.027494996 0.087843494 Down 0.404271 1.555413 1.019711 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6151_c0_g1_i1 23.02458347 32.54500818 13.50415875 0.414937943 -1.269032507 0.019635729 0.066805924 Down 2.412781 3.722983 2.850765 1.003065 0.5437027 1.457295 CDP15596.1 unnamed protein product [Coffea canephora] Q10Q08|RFA1B_ORYSJ Replication protein A 70 kDa DNA-binding subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1B PE=1 SV=1 bdi:100845662 K07466 "RFA1, RPA1, rpa" replication factor A1 ko03430|ko03030|ko03440|ko03420 Mismatch repair|DNA replication|Homologous recombination|Nucleotide excision repair KOG0851 "Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG1599 DNA replication "Biological Process: telomere maintenance (GO:0000723);|Biological Process: double-strand break repair via homologous recombination (GO:0000724);|Cellular Component: nuclear chromosome, telomeric region (GO:0000784);|Molecular Function: damaged DNA binding (GO:0003684);|Molecular Function: single-stranded DNA binding (GO:0003697);|Cellular Component: DNA replication factor A complex (GO:0005662);|Biological Process: DNA-dependent DNA replication (GO:0006261);|Biological Process: DNA unwinding involved in DNA replication (GO:0006268);|Biological Process: DNA repair (GO:0006281);|Biological Process: nucleotide-excision repair (GO:0006289);|Biological Process: telomere maintenance via telomerase (GO:0007004);|Molecular Function: single-stranded telomeric DNA binding (GO:0043047);|Molecular Function: sequence-specific DNA binding (GO:0043565);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: meiotic cell cycle (GO:0051321);" -- -- TRINITY_DN6157_c0_g1_i1 21.70366445 12.43797691 30.96935199 2.489902676 1.316089352 0.022901761 0.075627794 Up 0.299678 3.213998 2.303058 3.304421 3.555231 4.904125 PWA87957.1 pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Artemisia annua] -- -- -- -- -- -- -- -- KOG2142 Molybdenum cofactor sulfurase [H] METABOLISM Coenzyme transport and metabolism E COG0520 cysteine desulfurase -- -- -- TRINITY_DN6171_c0_g1_i1 82.91106251 52.8065429 113.0155821 2.140181423 1.097733099 9.85E-05 0.000654022 Up 3.118049 3.192284 2.857243 5.449582 4.945918 5.408227 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6172_c0_g1_i1 41.18231641 21.91267811 60.4519547 2.758766153 1.464023172 0.000508275 0.002865035 Up 3.449243 3.360764 6.770893 10.30674 10.56986 9.138988 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6191_c0_g2_i1 3.339130041 6.678260083 0 0 #NAME? 0.011394636 0.042427751 Down 1.260879 1.199728 1.216295 0 0 0 XP_011085543.1 pentatricopeptide repeat-containing protein At5g66631 isoform X1 [Sesamum indicum] B3H4P1|PP450_ARATH Pentatricopeptide repeat-containing protein At5g66631 OS=Arabidopsis thaliana OX=3702 GN=At5g66631 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN6192_c0_g1_i2 15.96996069 31.5724122 0.367509184 0.0116402 -6.424740375 1.41E-09 1.97E-08 Down 1.640449 1.87404 2.359457 0.07861437 0 0 CAN79884.1 hypothetical protein VITISV_002539 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF13976.5 GAG-pre-integrase domain TRINITY_DN6218_c0_g1_i1 45.32214758 15.51834283 75.12595233 4.841106627 2.27533687 4.42E-06 3.81E-05 Up 2.951022 2.373062 4.170598 16.54756 11.34114 8.98069 XP_011089117.1 uncharacterized protein LOC105170170 isoform X2 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YP31 "Protein of unknown function, DUF538" -- -- -- TRINITY_DN6223_c0_g1_i1 4.801281878 9.602563756 0 0 #NAME? 0.001372038 0.006909357 Down 1.330446 0.9190019 1.109251 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6236_c0_g1_i1 7.359408327 14.71881665 0 0 #NAME? 3.24E-05 0.00023839 Down 1.835332 2.036482 2.009201 0 4.20E-74 0 XP_015635693.2 uncharacterized protein LOC107280759 [Oryza sativa Japonica Group] Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" -- -- TRINITY_DN6252_c0_g1_i1 14.32580329 26.80105544 1.850551135 0.069047696 -3.85626291 4.47E-06 3.85E-05 Down 2.352116 3.57793 4.452442 0.3329815 0.1615475 0.1707702 XP_011100818.1 major allergen Pru av 1-like [Sesamum indicum] P43177|BEV1D_BETPN Major pollen allergen Bet v 1-D/H OS=Betula pendula OX=3505 GN=BETV1D PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YZ38 Pathogenesis-related protein Cellular Component: cytoplasm (GO:0005737);|Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607); PF00407.18 Pathogenesis-related protein Bet v I family TRINITY_DN6259_c0_g1_i1 6.604669107 13.20933821 0 0 #NAME? 9.53E-05 0.000634712 Down 1.4879 3.307079 2.580067 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN627_c0_g1_i1 3.523760046 7.047520091 0 0 #NAME? 0.019396371 0.066140286 Down 0.9751064 2.852513 0.3745118 0 0 0 XP_021692914.1 uncharacterized protein LOC110673970 isoform X1 [Hevea brasiliensis] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN6291_c0_g1_i1 4.176593814 0.492078091 7.861109537 15.97532928 3.997773763 0.020448274 0.069001523 Up 0 0 0.3465386 1.478906 0.7428455 1.630787 GAQ83926.1 Pti1 kinase-like protein [Klebsormidium nitens] O80719|Y2706_ARATH Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana OX=3702 GN=At2g47060 PE=1 SV=1 egu:105051614 K13436 PTI1 pto-interacting protein 1 ko04626 Plant-pathogen interaction KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN6300_c0_g1_i1 17.11103713 34.22207425 0 0 #NAME? 2.07E-11 3.56E-10 Down 3.621566 5.843155 5.952497 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6303_c0_g1_i1 6.598687565 13.19737513 0 0 #NAME? 9.59E-05 0.000637753 Down 2.339821 2.595156 2.836808 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6314_c0_g1_i2 22.89325214 45.78650428 0 0 #NAME? 1.37E-13 2.85E-12 Down 8.702911 4.540402 5.883302 0 0 0 CAN73071.1 hypothetical protein VITISV_032383 [Vitis vinifera] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN6351_c0_g1_i1 10.51819939 16.13364189 4.9027569 0.303884079 -1.718407005 0.039251659 0.116882089 Down 1.456323 2.187637 1.930342 0.1182631 0.3505485 0.8974882 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6353_c0_g1_i1 4.765156366 9.530312732 0 0 #NAME? 0.001304489 0.006602886 Down 1.018725 0.9997616 1.830578 0 0 0 ABM86589.1 "transmembrane protein 66, partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- U ENOG4111IKY transmembrane protein 66 -- PF06682.11 SOCE-associated regulatory factor of calcium homoeostasis TRINITY_DN6357_c0_g1_i1 4.45029304 8.129009387 0.771576693 0.094916448 -3.397198084 0.025967822 0.083766155 Down 2.071313 0.4912552 2.42952 0 0 0.4713338 PIN20074.1 "Glucan endo-1,3-beta-D-glucosidase [Handroanthus impetiginosus]" Q6NKW9|E138_ARATH "Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana OX=3702 GN=At1g64760 PE=2 SV=2" -- -- -- -- -- -- -- -- -- -- -- G ENOG410YBX5 "glucan endo-1,3-beta-glucosidase" "Cellular Component: cell wall (GO:0005618);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: defense response (GO:0006952);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: plant-type cell wall organization (GO:0009664);|Cellular Component: anchored component of membrane (GO:0031225);|Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);|Cellular Component: anchored component of plasma membrane (GO:0046658);|Cellular Component: apoplast (GO:0048046);" PF07983.12 X8 domain TRINITY_DN636_c0_g1_i1 37.56375585 8.106607202 67.02090449 8.267441955 3.047441011 7.20E-11 1.16E-09 Up 0.235952 0.3283537 0.2813078 1.816415 1.749338 2.138461 XP_011085266.1 LRR receptor-like serine/threonine-protein kinase FLS2 [Sesamum indicum] Q9FL28|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana OX=3702 GN=FLS2 PE=1 SV=1 sind:105167308 K13420 FLS2 LRR receptor-like serine/threonine-protein kinase FLS2 ko04626 Plant-pathogen interaction -- -- -- -- -- S COG4886 leucine Rich Repeat -- "PF00069.24,PF07714.16,PF13855.5,PF12799.6,PF00560.32,PF13516.5" Protein kinase domain|Protein tyrosine kinase|Leucine rich repeat|Leucine Rich repeats (2 copies)|Leucine Rich Repeat|Leucine Rich repeat TRINITY_DN6373_c0_g1_i1 9.720433255 18.28350147 1.15736504 0.063301061 -3.981626511 0.000128493 0.000833119 Down 1.910642 1.280371 2.674981 0 0 0.3564916 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6394_c0_g1_i1 11.98358313 23.96716627 0 0 #NAME? 3.93E-08 4.59E-07 Down 2.081721 3.54469 2.873917 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6397_c0_g1_i1 8.811019652 13.89492661 3.727112698 0.268235508 -1.898427866 0.04033889 0.119453535 Down 1.23357 2.210323 2.222458 0.2197957 0.4366077 0.4478331 PIN06683.1 hypothetical protein CDL12_20746 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41115QD NA -- -- -- TRINITY_DN6406_c0_g1_i2 16.76402163 33.52804326 0 0 #NAME? 4.59E-11 7.62E-10 Down 4.714195 5.652892 3.992631 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6408_c0_g1_i1 6.838074791 11.43453615 2.241613431 0.19603886 -2.350788433 0.035740485 0.108621306 Down 0.935689 1.581527 0.9721313 0.3434051 0 0.2402271 XP_012829847.1 PREDICTED: HORMA domain-containing protein 1-like [Erythranthe guttata] F4HRV8|ASY1_ARATH Meiosis-specific protein ASY1 OS=Arabidopsis thaliana OX=3702 GN=ASY1 PE=1 SV=1 -- -- -- -- -- -- KOG4652 HORMA domain [B] INFORMATION STORAGE AND PROCESSING Chromatin structure and dynamics S ENOG410XT4N HORMA domain containing Cellular Component: chromatin (GO:0000785);|Cellular Component: condensed nuclear chromosome (GO:0000794);|Cellular Component: nucleoplasm (GO:0005654);|Cellular Component: chromosome (GO:0005694);|Biological Process: synapsis (GO:0007129);|Biological Process: chiasma assembly (GO:0051026); -- -- TRINITY_DN641_c0_g1_i1 2.2663952 0 4.5327904 Inf Inf 0.040270694 0.119298286 Up 0 0 0 0.5287671 0.1736618 1.129841 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6432_c0_g1_i1 14.36825756 22.55742033 6.179094799 0.273927369 -1.868134678 0.012985423 0.047409901 Down 5.163795 4.332607 2.448974 0.660217 1.934221 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6442_c0_g1_i1 14.11449984 28.22899968 0 0 #NAME? 1.15E-05 9.22E-05 Down 2.209751 1.47352 4.627507 0 0 0 XP_022856132.1 TORTIFOLIA1-like protein 4 [Olea europaea var. sylvestris] Q9XIE4|TORL5_ARATH TORTIFOLIA1-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=TOR1L5 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YDH8 Microtubule-associated protein Cellular Component: microtubule (GO:0005874);|Molecular Function: microtubule binding (GO:0008017); -- -- TRINITY_DN6458_c0_g1_i1 15.64840333 31.29680666 0 0 #NAME? 0.00067881 0.003702622 Down 5.048317 3.603719 0.3394993 3.70E-25 0.00285438 0.001072908 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6460_c0_g1_i1 24.19045271 46.5539074 1.826998024 0.039244784 -4.671355283 2.58E-11 4.39E-10 Down 6.351254 4.102328 6.993499 0.3733327 0.1903824 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6461_c0_g1_i1 6.242245173 10.94133696 1.543153387 0.141038832 -2.825835661 0.036260879 0.109813201 Down 2.520055 2.392335 0.380344 0 0 0.5827415 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6466_c0_g1_i1 4.730230548 9.460461096 0 0 #NAME? 0.007067526 0.02848408 Down 3.211554 1.924193 0.3216272 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6468_c0_g1_i1 25.99864879 35.7142298 16.28306778 0.455926612 -1.133126476 0.02884451 0.091357719 Down 3.802161 4.023107 2.830093 0.7562678 0.5638432 2.633868 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6476_c0_g1_i1 9.124284134 1.872538056 16.37603021 8.745365767 3.128518725 0.001129607 0.005812977 Up 0 1.214833 0 2.923147 2.334049 2.897676 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6479_c0_g1_i1 19.82352732 8.412496485 31.23455815 3.71287622 1.892537219 0.002067499 0.009915476 Up 0.4240223 1.434933 1.461674 2.204203 3.990467 3.735279 XP_012073972.2 receptor-like protein 12 [Jatropha curcas] Q6JN47|EIX1_SOLLC Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); "PF08263.11,PF13516.5" Leucine rich repeat N-terminal domain|Leucine Rich repeat TRINITY_DN6481_c0_g1_i1 11.96768632 4.585167951 19.3502047 4.220173591 2.077302343 0.009194159 0.035537335 Up 0.5449233 0.7031102 0.6882373 3.126467 1.216606 2.161702 KZV24224.1 hypothetical protein F511_35110 [Dorcoceras hygrometricum] Q9LTC5|ERF98_ARATH Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 GN=ERF098 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- K ENOG410YYI7 Transcription factor Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: ethylene-activated signaling pathway (GO:0009873);|Biological Process: response to chitin (GO:0010200); PF00847.19 AP2 domain TRINITY_DN6496_c0_g1_i1 9.102165917 18.20433183 0 0 #NAME? 2.81E-06 2.51E-05 Down 1.199732 2.62855 1.429078 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6507_c0_g1_i1 26.02207801 8.018154387 44.02600163 5.490789963 2.457013726 3.84E-06 3.35E-05 Up 0.4393644 1.897564 0.6616539 4.004062 5.658974 3.699689 AAW66631.1 leonurin [Leonurus japonicus] Q39649|2SS_CUCMA 2S albumin OS=Cucurbita maxima OX=3661 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Cellular Component: storage vacuole (GO:0000322);|Cellular Component: aleurone grain (GO:0033095);|Molecular Function: nutrient reservoir activity (GO:0045735); PF00234.21 Protease inhibitor/seed storage/LTP family TRINITY_DN6529_c0_g1_i1 6.938560881 0.936269028 12.94085273 13.82172468 3.788865742 0.021882495 0.072818129 Up 0 0.5736607 1.25E-27 4.188081 1.047142 1.062103 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6578_c0_g1_i1 5.271535746 10.54307149 0 0 #NAME? 0.008480401 0.033219782 Down 3.046888 0 3.480015 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN658_c0_g1_i1 3.431445043 6.862890087 0 0 #NAME? 0.010523873 0.039694229 Down 1.066299 2.028322 0.8071785 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6606_c0_g1_i1 12.0824249 18.25377779 5.911072008 0.323827324 -1.626703374 0.038449632 0.114915995 Down 2.607996 2.788859 2.683846 0.4714173 0.9587144 0.5132348 AJD25153.1 cytochrome P450 CYP71AT89 [Salvia miltiorrhiza] O65782|C83B1_ARATH Cytochrome P450 83B1 OS=Arabidopsis thaliana OX=3702 GN=CYP83B1 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Biological Process: tryptophan biosynthetic process (GO:0000162);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: shade avoidance (GO:0009641);|Biological Process: induced systemic resistance (GO:0009682);|Biological Process: indoleacetic acid biosynthetic process (GO:0009684);|Biological Process: indole glucosinolate biosynthetic process (GO:0009759);|Biological Process: response to red light (GO:0010114);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);|Biological Process: regulation of growth (GO:0040008);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: adventitious root development (GO:0048830);|Biological Process: defense response by callose deposition in cell wall (GO:0052544);" PF00067.21 Cytochrome P450 TRINITY_DN6608_c0_g1_i1 35.36279381 17.5770697 53.14851792 3.023741661 1.596334885 0.001580346 0.007824678 Up 3.422708 2.762148 3.640438 4.653523 10.47156 9.163409 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN661_c0_g1_i1 6.049640582 12.09928116 0 0 #NAME? 0.000235552 0.001438311 Down 1.992174 2.587926 1.553076 0 0 0 KZV44983.1 hypothetical protein F511_32729 [Dorcoceras hygrometricum] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN661_c1_g1_i1 8.509050196 17.01810039 0 0 #NAME? 0.005235172 0.022032281 Down 2.173565 1.080314 7.152074 0 0 0 CAN74695.1 hypothetical protein VITISV_024648 [Vitis vinifera] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN6621_c0_g1_i1 51.48847282 102.9769456 0 0 #NAME? 1.29E-32 7.92E-31 Down 12.66479 11.65326 11.04021 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6634_c0_g1_i1 11.69621644 23.39243288 0 0 #NAME? 5.50E-08 6.29E-07 Down 1.270218 1.138615 1.571777 0 0 0 AGT40478.1 polymerase [Rabies viral vector pRVdG-1O5G1-10Nxn] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00946.18 Mononegavirales RNA dependent RNA polymerase TRINITY_DN6635_c0_g1_i1 91.4395942 182.8791884 0 0 #NAME? 3.70E-57 4.91E-55 Down 26.72896 24.93448 29.99101 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6639_c0_g1_i1 54.16056574 88.93839239 19.38273908 0.217934444 -2.198033867 3.56E-05 0.000259723 Down 22.06327 13.64406 14.58548 2.639009 0 6.309287 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6656_c0_g1_i1 4.558903579 9.117807158 0 0 #NAME? 0.001845116 0.00896546 Down 1.538985 1.482604 2.088954 0 0 0 PNX86003.1 retrotransposon protein [Trifolium pratense] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN6665_c0_g1_i1 12.79251723 6.109692259 19.4753422 3.187614265 1.672477059 0.039803597 0.118161315 Up 0 2.711366 0.1882792 2.00389 1.977792 3.757508 PIN20268.1 hypothetical protein CDL12_07031 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z6QM NA -- -- -- TRINITY_DN666_c0_g1_i1 6.406736067 12.81347213 0 0 #NAME? 0.000133998 0.000865722 Down 2.373991 0.7143786 1.59037 0 0 0 XP_012847415.1 PREDICTED: uncharacterized protein LOC105967360 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGVB NA -- PF03004.13 Plant transposase (Ptta/En/Spm family) TRINITY_DN6680_c0_g1_i2 43.83666457 63.18398845 24.48934069 0.387587762 -1.367405075 0.000736413 0.003978575 Down 7.399294 6.116654 4.620371 1.814528 2.113545 1.797084 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6681_c0_g1_i1 19.53884216 6.3723708 32.70531352 5.132361965 2.359622921 0.000104154 0.000688387 Up 2.059762 1.01146 0.7879651 7.214908 3.713828 4.878832 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6690_c0_g1_i1 6.512354105 13.02470821 0 0 #NAME? 0.000103484 0.000684363 Down 1.323899 2.26681 2.549124 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6692_c0_g1_i1 18.21621311 0 36.43242622 Inf Inf 3.30E-13 6.62E-12 Up 0 0 0 5.188375 3.024892 3.880306 KZM18383.1 hypothetical protein ST47_g10529 [Ascochyta rabiei] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG1100 GTP-binding Protein -- PF11034.7 Glucose-repressible protein Grg1 TRINITY_DN6704_c0_g1_i1 7.82173458 0 15.64346916 Inf Inf 5.38E-06 4.57E-05 Up 0 0 0 1.798613 2.99183 3.241979 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6729_c0_g1_i1 5.815073597 10.47278215 1.15736504 0.110511708 -3.177728877 0.014001594 0.050460717 Down 1.434517 1.146773 1.276519 0 0 0.3654005 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6737_c0_g1_i1 5.749818811 10.41293192 1.086705707 0.104361165 -3.26034314 0.015719942 0.055509553 Down 3.017915 1.446631 1.573117 0 0.5488241 0 EYU38319.1 hypothetical protein MIMGU_mgv1a005763mg [Erythranthe guttata] Q9SZ45|MICU_ARATH "Calcium uptake protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MICU PE=2 SV=1" -- -- -- -- -- -- KOG2643 "Ca2+ binding protein, contains EF-hand motifs" [P] METABOLISM Inorganic ion transport and metabolism S ENOG410ZSC1 "EF-hand domain family, member" Molecular Function: calcium ion binding (GO:0005509);|Cellular Component: mitochondrion (GO:0005739);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Cellular Component: mitochondrial intermembrane space (GO:0005758);|Biological Process: calcium ion transport (GO:0006816);|Biological Process: negative regulation of mitochondrial calcium ion concentration (GO:0051562); -- -- TRINITY_DN6738_c0_g1_i1 8.782339814 0 17.56467963 Inf Inf 1.19E-06 1.13E-05 Up 0 0 0 1.202421 1.293153 2.066292 XP_008371398.1 PREDICTED: auxin-repressed 12.5 kDa protein-like isoform X1 [Malus domestica] Q05349|12KD_FRAAN Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa OX=3747 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YV4V Auxin-repressed 12.5 kDa Biological Process: auxin-activated signaling pathway (GO:0009734); PF05564.11 Dormancy/auxin associated protein TRINITY_DN6748_c0_g1_i1 10.4279952 20.85599039 0 0 #NAME? 4.94E-07 4.96E-06 Down 5.684141 4.92971 2.505543 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6778_c0_g1_i1 18.50052574 32.42642881 4.574622673 0.141076981 -2.825445489 2.28E-05 0.00017244 Down 3.344358 4.642826 4.0254 0.3505573 0 1.112637 XP_024189972.1 uncharacterized protein LOC112193939 [Rosa chinensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6782_c0_g1_i1 14.96355486 25.88450869 4.042601028 0.156178395 -2.678733202 0.000302526 0.001805255 Down 4.265057 4.058831 5.787365 1.844365 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6792_c0_g1_i1 18.69048956 37.38097913 0 0 #NAME? 0.003256484 0.014654663 Down 5.736203 10.38376 0 0 0 0 KHN13978.1 Metallothionein-like protein 2 [Glycine soja] Q39459|MT2_CICAR Metallothionein-like protein 2 OS=Cicer arietinum OX=3827 PE=3 SV=2 -- -- -- -- -- -- KOG4738 Predicted metallothionein [P] METABOLISM Inorganic ion transport and metabolism S ENOG410Z616 metallothionein-like protein Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN6793_c0_g1_i1 13.02991878 23.47708469 2.582752871 0.110011652 -3.184271758 0.00016843 0.001064244 Down 4.145978 2.168822 2.219892 0 0.5272975 0.2041258 CAN83876.1 hypothetical protein VITISV_014759 [Vitis vinifera] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); PF14223.5 gag-polypeptide of LTR copia-type TRINITY_DN679_c0_g1_i1 9.934372249 18.32559111 1.543153387 0.084207564 -3.569906359 0.000307992 0.00183329 Down 1.646242 4.281214 3.343157 0 0 0.599381 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6804_c0_g1_i1 11.50161113 18.92160559 4.081616668 0.215711962 -2.212821913 0.008382898 0.032878398 Down 2.241378 4.152209 2.082261 0.6848307 0.4421461 0.4632481 EYU32747.1 "hypothetical protein MIMGU_mgv1a019144mg, partial [Erythranthe guttata]" Q9LFE3|AVT1H_ARATH Amino acid transporter AVT1H OS=Arabidopsis thaliana OX=3702 GN=AVT1H PE=3 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: vacuolar membrane (GO:0005774);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Cellular Component: integral component of membrane (GO:0016021); PF01490.17 Transmembrane amino acid transporter protein TRINITY_DN6806_c0_g1_i1 19.58061766 35.53888297 3.622352355 0.101926455 -3.294399544 2.11E-06 1.92E-05 Down 6.070987 7.559052 3.887135 0 1.376803 2.14E-10 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6806_c0_g2_i1 15.95325449 26.28701287 5.619496106 0.213774617 -2.225837534 0.00140133 0.007041241 Down 3.937006 3.97544 3.572998 0.4893263 0.4924848 0.9910031 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6814_c0_g1_i1 6.878694602 13.37160086 0.385788347 0.028851321 -5.11521882 0.000429921 0.002469994 Down 2.978849 0.9689614 2.13685 0 0 0.2054913 XP_022875775.1 uncharacterized protein LOC111394251 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YJRW NA -- -- -- TRINITY_DN6816_c0_g1_i2 6.86633078 11.41793148 2.31473008 0.202727621 -2.302385433 0.032793314 0.101436927 Down 2.751308 1.378625 2.851786 0 0 1.126341 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6820_c0_g1_i1 39.669018 79.33803601 0 0 #NAME? 2.43E-25 1.08E-23 Down 9.842754 11.44969 9.491573 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6828_c0_g1_i1 6.506013453 13.01202691 0 0 #NAME? 0.010432888 0.039412456 Down 2.626487 3.970477 0 0 0 0 KHN05545.1 Vacuolar cation/proton exchanger 3 [Glycine soja] Q93Z81|CAX3_ARATH Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana OX=3702 GN=CAX3 PE=1 SV=1 gmx:100816231 K07300 "chaA, CAX" Ca2+:H+ antiporter -- -- KOG1397 Ca2+/H+ antiporter VCX1 and related proteins [P] METABOLISM Inorganic ion transport and metabolism P COG0387 Calcium Proton Cellular Component: vacuole (GO:0005773);|Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: phosphorus metabolic process (GO:0006793);|Biological Process: cellular calcium ion homeostasis (GO:0006874);|Biological Process: cellular zinc ion homeostasis (GO:0006882);|Biological Process: response to nematode (GO:0009624);|Cellular Component: plant-type vacuole membrane (GO:0009705);|Molecular Function: calcium:proton antiporter activity (GO:0015369);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: cellular manganese ion homeostasis (GO:0030026);|Biological Process: response to calcium ion (GO:0051592);|Biological Process: phosphate ion homeostasis (GO:0055062);|Biological Process: calcium ion transmembrane transport (GO:0070588); -- -- TRINITY_DN6834_c0_g1_i1 9.197379675 18.39475935 0 0 #NAME? 2.19E-06 1.99E-05 Down 2.865575 2.142613 2.960176 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6838_c0_g1_i1 7.796932828 0.246039046 15.34782661 62.37963805 5.963003277 0.006756386 0.027413418 Up 1.77E-39 8.37E-16 0.07770337 1.165994 2.491065 0.306869 EYU36335.1 hypothetical protein MIMGU_mgv1a004314mg [Erythranthe guttata] O64636|C76C1_ARATH Cytochrome P450 76C1 OS=Arabidopsis thaliana OX=3702 GN=CYP76C1 PE=2 SV=1 sind:105155492 K20513 CYP76AH1 ferruginol synthase ko00904 Diterpenoid biosynthesis KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN6840_c0_g1_i1 9.246667964 18.49333593 0 0 #NAME? 0.003928703 0.017212201 Down 5.231483 4.985226 0 0 0 0 KRH62520.1 hypothetical protein GLYMA_04G112800 [Glycine max] P12357|PSAG_SPIOL "Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAG PE=1 SV=1" gmx:100305786 K08905 psaG photosystem I subunit V ko00195 Photosynthesis -- -- -- -- -- I ENOG41120CZ photosystem I reaction center subunit V Cellular Component: photosystem I (GO:0009522);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: integral component of membrane (GO:0016021); PF01241.17 Photosystem I psaG / psaK TRINITY_DN6847_c0_g1_i2 25.56177848 51.12355695 0 0 #NAME? 8.57E-17 2.27E-15 Down 3.718829 5.108769 6.566621 0 0 0 XP_012829983.1 PREDICTED: uncharacterized protein LOC105951139 [Erythranthe guttata] -- -- -- -- -- -- -- -- KOG4585 Predicted transposase [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG411206Y transposon protein -- -- -- TRINITY_DN6853_c0_g1_i1 20.3340393 39.51071355 1.15736504 0.029292436 -5.093328025 3.93E-08 4.59E-07 Down 6.189081 7.350077 3.035358 0 0 0.3814454 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6859_c0_g1_i1 8.027188618 0 16.05437724 Inf Inf 0.002690292 0.012440955 Up 0 0 0 2.785596 2.771494 0 XP_011073789.1 probable pectinesterase 29 [Sesamum indicum] Q3E9D3|PME55_ARATH Probable pectinesterase 55 OS=Arabidopsis thaliana OX=3702 GN=PME55 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- G COG4677 pectinesterase Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Molecular Function: pectinesterase activity (GO:0030599);|Biological Process: cell wall modification (GO:0042545);|Molecular Function: aspartyl esterase activity (GO:0045330);|Biological Process: pectin catabolic process (GO:0045490); -- -- TRINITY_DN6860_c0_g1_i1 5.449280028 9.449619114 1.448940942 0.153333264 -2.705257387 0.042031797 0.123435943 Down 2.776599 1.352788 1.613447 0 0.7399602 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6863_c1_g1_i1 3.519804994 0 7.039609988 Inf Inf 0.005182959 0.021838862 Up 0 0 0 0.4171185 1.494378 1.001312 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6865_c0_g1_i1 15.05796971 23.475123 6.640816428 0.282887396 -1.821700193 0.026651859 0.085607686 Down 5.950415 1.439198 5.125187 0.7129197 1.433588 0.7207206 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6873_c0_g1_i1 3.493834927 6.987669854 0 0 #NAME? 0.023333149 0.076756404 Down 1.289557 1.808653 0 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6875_c0_g1_i1 14.45316129 3.527639644 25.37868294 7.194239067 2.846842102 8.97E-05 0.000600469 Up 0.3861304 0.2121965 0 1.034421 0.9928592 1.470781 XP_012853559.1 PREDICTED: cytochrome P450 CYP736A12-like [Erythranthe guttata] H2DH18|C7A12_PANGI Cytochrome P450 CYP736A12 OS=Panax ginseng OX=4054 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN6882_c0_g1_i1 4.815364315 9.63072863 0 0 #NAME? 0.001150956 0.005912114 Down 1.498912 1.460446 3.152348 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6885_c0_g1_i1 8.590593817 16.44616927 0.735018369 0.044692375 -4.483827468 0.00020923 0.001295887 Down 3.22857 1.687484 1.532371 0.2016272 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6885_c0_g2_i1 11.00609784 19.36651475 2.64568094 0.136611103 -2.871853353 0.000931231 0.004899322 Down 1.138407 1.707425 2.861127 0.2624668 0 0.4003179 XP_011084090.1 probable sucrose-phosphate synthase 1 [Sesamum indicum] O22060|SPSA1_CITUN Probable sucrose-phosphate synthase 1 OS=Citrus unshiu OX=55188 GN=SPS1 PE=2 SV=1 sind:105166439 K00696 E2.4.1.14 sucrose-phosphate synthase ko00500 Starch and sucrose metabolism KOG0853 Glycosyltransferase [M] CELLULAR PROCESSES AND SIGNALING Cell wall/membrane/envelope biogenesis M COG0438 Glycosyl transferase (Group 1 Biological Process: sucrose biosynthetic process (GO:0005986);|Molecular Function: sucrose synthase activity (GO:0016157);|Molecular Function: sucrose-phosphate synthase activity (GO:0046524); -- -- TRINITY_DN6886_c0_g1_i1 20.67561826 33.81580389 7.535432626 0.222837601 -2.165935403 0.002715483 0.01254945 Down 4.612424 1.657702 4.136519 0.5135014 0.2519186 1.035885 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6897_c0_g1_i1 3.011197684 6.022395368 0 0 #NAME? 0.016540134 0.057843321 Down 1.105908 0.3955789 2.030293 0 1.13E-07 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6913_c0_g1_i1 7.63925209 15.27850418 0 0 #NAME? 2.15E-05 0.000163414 Down 1.661373 0.9870137 1.569382 0 0 0 PNX61902.1 "retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Trifolium pratense]" P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN6923_c0_g1_i1 19.74845557 39.49691115 0 0 #NAME? 0.001023854 0.005331017 Down 7.07171 7.52209 0 0 0 0 KRG94691.1 hypothetical protein GLYMA_19G102400 [Glycine max] Q96500|LIRP1_ARATH "Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410YMXP light-regulated protein-like Biological Process: circadian rhythm (GO:0007623);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: chloroplast envelope (GO:0009941);|Cellular Component: chloroplast thylakoid membrane protein complex (GO:0098807); PF07207.10 Light regulated protein Lir1 TRINITY_DN6930_c0_g1_i1 5.67543199 10.19349894 1.15736504 0.113539526 -3.138733468 0.015118318 0.053706826 Down 0.9749187 1.910579 1.889654 0 0 0.4591114 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6931_c0_g1_i1 10.61092075 3.02936116 18.19248034 6.005385089 2.58625676 0.002444927 0.011443863 Up 0.3680536 0.5314518 0.1390503 1.647687 1.651544 1.59995 XP_011075511.1 uncharacterized protein LOC105159972 [Sesamum indicum] Q9SX68|RK18_ARATH "50S ribosomal protein L18, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL18 PE=2 SV=1" -- -- -- -- -- -- KOG1870 Ubiquitin C-terminal hydrolase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " S ENOG410Y2MQ Ribosomal L18p/L5e family Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleolus (GO:0005730);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: ribosome (GO:0005840);|Biological Process: translation (GO:0006412);|Molecular Function: 5S rRNA binding (GO:0008097);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: chloroplast envelope (GO:0009941); PF00861.21 "Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast" TRINITY_DN6942_c1_g1_i1 7.022962884 13.68369053 0.362235236 0.026472042 -5.239386684 0.000354518 0.002081034 Down 1.746222 0.6873341 1.230396 0 0.1051322 0 PON37013.1 "Ribonuclease H, partial [Trema orientale]" -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN6944_c0_g1_i1 12.84464943 6.735430415 18.95386845 2.814054527 1.492650283 0.036076515 0.109378923 Up 0.993135 2.448419 0.3875994 4.102531 2.081716 2.646275 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6946_c0_g1_i1 4.156757306 7.589044141 0.724470471 0.095462677 -3.388919393 0.039216928 0.116798523 Down 1.561074 0.9176743 1.180877 0 0.3042026 0 KYP41999.1 hypothetical protein KK1_036615 [Cajanus cajan] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG0249 that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity) -- -- -- TRINITY_DN6980_c0_g1_i1 16.22192534 3.589048686 28.854802 8.039679739 3.007138033 2.08E-05 0.000158764 Up 1.690008 0 0.694492 5.566405 5.540939 3.788289 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6981_c0_g2_i1 20.29278653 31.50944436 9.076128697 0.288044708 -1.795635342 0.002199671 0.010434449 Down 4.136802 8.018596 7.00245 1.725334 0 2.626923 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN6982_c0_g1_i1 6.227728494 12.45545699 0 0 #NAME? 0.008438926 0.033071584 Down 2.729359 2.22747 0 0 0 0 KRG99049.1 hypothetical protein GLYMA_18G116900 [Glycine max] Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana OX=3702 GN=AGT1 PE=1 SV=2 gmx:100786630 K00830 AGXT alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase ko00260|ko00630|ko04146|ko00250 "Glycine, serine and threonine metabolism|Glyoxylate and dicarboxylate metabolism|Peroxisome|Alanine, aspartate and glutamate metabolism" KOG2862 Alanine-glyoxylate aminotransferase AGT1 [R] POORLY CHARACTERIZED General function prediction only E COG0075 aminotransferase "Molecular Function: serine-pyruvate transaminase activity (GO:0004760);|Cellular Component: peroxisome (GO:0005777);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: alanine-glyoxylate transaminase activity (GO:0008453);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: photorespiration (GO:0009853);|Cellular Component: membrane (GO:0016020);|Biological Process: glycine biosynthetic process, by transamination of glyoxylate (GO:0019265);|Cellular Component: apoplast (GO:0048046);|Molecular Function: serine-glyoxylate transaminase activity (GO:0050281);" -- -- TRINITY_DN6996_c0_g1_i1 15.65468304 22.89147449 8.417891597 0.367730423 -1.443279556 0.035293596 0.107507864 Down 3.089524 3.890945 3.473276 0.3717528 2.237584 0.3960506 PIM98950.1 hypothetical protein CDL12_28560 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF03732.16 Retrotransposon gag protein TRINITY_DN6997_c0_g1_i1 7.75717549 0.624179352 14.89017163 23.85559788 4.576255939 0.000171175 0.001079786 Up 0 0.3041399 0 1.16991 2.034722 2.071662 YP_009461712.1 ATP synthase CF1 alpha subunit (chloroplast) [Chionanthus parkinsonii] A4QJA0|ATPA_AETCO "ATP synthase subunit alpha, chloroplastic OS=Aethionema cordifolium OX=434059 GN=atpA PE=3 SV=1" sind:11452382 K02111 "ATPF1A, atpA" F-type H+-transporting ATPase subunit alpha ko00190|ko00195 Oxidative phosphorylation|Photosynthesis KOG1353 "F0F1-type ATP synthase, alpha subunit" [C] METABOLISM Energy production and conversion C COG0056 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (By similarity) "Molecular Function: ATP binding (GO:0005524);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: ATP synthesis coupled proton transport (GO:0015986);|Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261);|Molecular Function: proton-transporting ATP synthase activity, rotational mechanism (GO:0046933);" PF00006.24 "ATP synthase alpha/beta family, nucleotide-binding domain" TRINITY_DN7002_c0_g1_i1 10.34264097 17.01582337 3.669458577 0.215649781 -2.213237846 0.01206571 0.044517496 Down 1.028513 3.065079 2.062881 0 0.8157953 0.2759129 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7014_c0_g1_i1 14.57838053 4.667420373 24.48934069 5.246868449 2.391456619 0.001781777 0.008699601 Up 0.4552531 0 1.765565 3.117622 3.596952 3.125747 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7015_c0_g1_i1 22.96538343 33.35005136 12.5807155 0.377232268 -1.406475009 0.019513247 0.066439005 Down 6.609529 3.686671 2.931 1.143436 1.734501 1.162773 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7017_c0_g2_i1 11.02669242 17.56242671 4.490958126 0.255713985 -1.967397029 0.020168735 0.06826635 Down 2.576235 1.592453 1.372533 0.4881376 0.1619739 0.5270074 PIN06528.1 hypothetical protein CDL12_20918 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111893 NA -- -- -- TRINITY_DN701_c0_g1_i1 9.883512963 16.07647155 3.690554373 0.229562461 -2.12304135 0.016311164 0.057218908 Down 1.295489 1.10061 1.866846 0.2895969 0.2947579 0.1523746 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN702_c0_g1_i1 13.50054713 1.143301217 25.85779304 22.61678082 4.499321692 3.81E-05 0.00027654 Up 0.2672349 0 0.2051115 4.275631 2.252556 1.600523 AOQ14271.1 Trx-2-PA [synthetic construct] P22803|TRX2_YEAST Thioredoxin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRX2 PE=1 SV=3 -- -- -- -- -- -- KOG0907 Thioredoxin [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0526 Thioredoxin "Biological Process: vacuole inheritance (GO:0000011);|Biological Process: sulfate assimilation (GO:0000103);|Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: fungal-type vacuole (GO:0000324);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Biological Process: glycerol ether metabolic process (GO:0006662);|Biological Process: glutathione metabolic process (GO:0006749);|Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);|Biological Process: retrograde vesicle-mediated transport, Golgi to ER (GO:0006890);|Biological Process: deoxyribonucleotide biosynthetic process (GO:0009263);|Biological Process: protein transport (GO:0015031);|Molecular Function: protein disulfide oxidoreductase activity (GO:0015035);|Molecular Function: disulfide oxidoreductase activity (GO:0015036);|Biological Process: vacuole fusion, non-autophagic (GO:0042144);|Biological Process: cell redox homeostasis (GO:0045454);|Biological Process: protein deglutathionylation (GO:0080058);" "PF00085.19,PF13098.5,PF13905.5" Thioredoxin|Thioredoxin-like domain|Thioredoxin-like TRINITY_DN7041_c0_g1_i1 21.76263517 8.127888286 35.39738205 4.355052727 2.122690186 0.000191189 0.00119363 Up 1.199891 0.1054449 0.4181825 1.677185 2.090642 2.511794 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7046_c0_g1_i1 3.00443674 6.008873481 0 0 #NAME? 0.016641674 0.058108886 Down 0.9693881 0.4766728 1.936789 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7066_c0_g1_i1 7.838968955 13.86676173 1.811176178 0.130612771 -2.936632126 0.007496182 0.029916843 Down 2.783002 3.476999 2.2581 0 0.8872646 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7071_c0_g1_i1 21.92314463 40.75998249 3.086306774 0.075719041 -3.723200056 0.032061979 0.099581896 Down 17.82279 4.735825 3.846175 0 0 1.701409 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7073_c0_g1_i1 16.27266759 28.37478002 4.170555164 0.146981057 -2.766297861 0.014903406 0.053084613 Down 8.592505 2.874237 3.141112 0.6074506 6.91E-70 1.158788 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN707_c0_g1_i1 10.28204784 3.122455564 17.44164012 5.585872966 2.481782764 0.003503183 0.015610089 Up 0.6899774 0.500152 0.1330143 1.635938 2.630276 2.11144 XP_010102423.2 uncharacterized protein LOC21385631 [Morus notabilis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN70_c0_g1_i1 32.29318903 64.58637807 0 0 #NAME? 5.56E-14 1.18E-12 Down 8.165842 14.30242 7.808634 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7112_c0_g1_i1 4.834307193 9.668614386 0 0 #NAME? 0.00133315 0.006734439 Down 2.139387 1.552359 1.693023 0 0 0 PKA59461.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Apostasia shenzhenica] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein -- -- -- TRINITY_DN7115_c0_g1_i1 8.515872321 17.03174464 0 0 #NAME? 0.00232538 0.010955471 Down 4.539055 5.646206 0.3072008 6.41E-54 0 9.10E-52 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7117_c0_g1_i1 14.4753691 25.3020161 3.648722099 0.144206773 -2.793789167 0.000218656 0.001347101 Down 4.060634 3.982545 7.846421 0.9866907 0.9989911 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7126_c0_g1_i2 9.339123224 18.67824645 0 0 #NAME? 1.78E-06 1.64E-05 Down 1.878933 3.426214 2.822636 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7144_c0_g1_i1 11.54305294 23.08610589 0 0 #NAME? 6.30E-08 7.15E-07 Down 2.005588 3.481227 4.158091 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7147_c0_g1_i1 17.96752553 9.375809286 26.55924178 2.832741256 1.502198831 0.025190109 0.081704508 Up 0.6884497 1.769616 1.567911 1.45459 3.163611 4.428458 XP_011071214.1 F-box/kelch-repeat protein At1g67480-like [Sesamum indicum] Q9CAG8|FBK28_ARATH F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g67480 PE=2 SV=1 -- -- -- -- -- -- KOG1072 FOG: Kelch repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG4110X8D Kelch repeat-containing F-box family protein -- -- -- TRINITY_DN7159_c0_g1_i1 6.978167824 13.95633565 0 0 #NAME? 4.94E-05 0.000349965 Down 1.993471 2.609112 4.311744 1.24E-69 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7162_c0_g2_i1 10.88009176 19.94900734 1.811176178 0.090790291 -3.461318167 0.00025084 0.001524483 Down 2.824665 3.667655 4.089893 0 0.7377251 0 AIC63000.1 "FTL, partial [synthetic construct]" O65100|FRI3_VIGUN "Ferritin-3, chloroplastic OS=Vigna unguiculata OX=3917 PE=2 SV=1" -- -- -- -- -- -- -- -- -- -- -- P COG1528 "Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis (By similarity)" Molecular Function: ferroxidase activity (GO:0004322);|Biological Process: iron ion transport (GO:0006826);|Biological Process: cellular iron ion homeostasis (GO:0006879);|Molecular Function: ferric iron binding (GO:0008199);|Cellular Component: chloroplast (GO:0009507); PF00210.23 Ferritin-like domain TRINITY_DN7168_c0_g1_i1 18.35081298 36.70162595 0 0 #NAME? 0.001238196 0.006313088 Down 4.042195 3.562935 0 0 0 0 KRH10843.1 hypothetical protein GLYMA_15G072400 [Glycine max] P24805|TSJT1_TOBAC Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF12481.7,PF13537.5" Aluminium induced protein|Glutamine amidotransferase domain TRINITY_DN7177_c0_g1_i1 26.07145949 52.14291899 0 0 #NAME? 5.47E-17 1.47E-15 Down 7.972933 10.54558 10.06449 0 0 0 AJD25194.1 cytochrome P450 CYP81B62 [Salvia miltiorrhiza] Q9FG65|C81D1_ARATH Cytochrome P450 81D1 OS=Arabidopsis thaliana OX=3702 GN=CYP81D1 PE=2 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: iron ion binding (GO:0005506);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);|Molecular Function: heme binding (GO:0020037);|Biological Process: indole glucosinolate metabolic process (GO:0042343);" -- -- TRINITY_DN7195_c0_g1_i1 33.50378405 46.21405573 20.79351237 0.449939137 -1.152198231 0.011955618 0.044197523 Down 2.911693 2.672033 2.167699 0.7750851 1.093316 0.9382791 XP_021828817.1 zinc finger MYM-type protein 1 [Prunus avium] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XQ1Y zinc finger -- -- -- TRINITY_DN719_c0_g1_i1 9.277031359 3.88605767 14.66800505 3.774520681 1.916293451 0.037411338 0.112479328 Up 0.2611331 1.018504 0.2964997 1.879217 2.292474 0.4918268 KZV19790.1 F-box family protein [Dorcoceras hygrometricum] Q8GX29|SKI25_ARATH F-box/kelch-repeat protein SKIP25 OS=Arabidopsis thaliana OX=3702 GN=SKIP25 PE=1 SV=1 -- -- -- -- -- -- KOG1072 FOG: Kelch repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG4111R43 F-box kelch-repeat protein Cellular Component: nucleus (GO:0005634);|Biological Process: protein ubiquitination (GO:0016567);|Biological Process: response to karrikin (GO:0080167); -- -- TRINITY_DN7208_c0_g1_i1 8.09907661 0 16.19815322 Inf Inf 3.18E-06 2.81E-05 Up 0 0 0 2.221014 2.226849 0.8454094 AAS77403.1 quercetin 3-O-glucoside-6''-O-malonyltransferase [Glandularia x hybrida] Q9ZWR8|ANTA_GENTR Anthocyanin 5-aromatic acyltransferase OS=Gentiana triflora OX=55190 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZBAM Anthocyanin 5-aromatic "Cellular Component: cytoplasm (GO:0005737);|Molecular Function: anthocyanin 5-aromatic acyltransferase activity (GO:0047183);|Molecular Function: caffeoyl-CoA:pelargonidin-3,5-diglucoside 5-O-glucoside-6-O-hydroxycinnamoyltransferase activity (GO:0102777);|Molecular Function: caffeoyl-CoA:delphinidin-3,5-diglucoside 5-O-glucoside-6-O-hydroxycinnamoyltransferase activity (GO:0102815);" PF02458.14 Transferase family TRINITY_DN720_c0_g1_i1 4.028379182 8.056758363 0 0 #NAME? 0.008167786 0.032186847 Down 0.8551746 0.4335173 2.372904 7.68E-83 0 2.50E-103 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7213_c0_g1_i2 87.38070534 133.9923502 40.76906046 0.30426409 -1.716604023 1.85E-09 2.55E-08 Down 2.821531 2.865308 3.053796 0.9582378 0.5984304 0.5770317 XP_022854040.1 uncharacterized protein LOC111375444 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS82 Retrotransposon protein -- PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN721_c0_g1_i1 16.83818044 6.511793554 27.16456733 4.171595291 2.060599201 0.045581709 0.13167179 Up 0.9593931 0.8308482 0.643141 4.877041 1.038742 2.583459 XP_012841431.1 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Erythranthe guttata] Q6JN46|EIX2_SOLLC Receptor-like protein EIX2 OS=Solanum lycopersicum OX=4081 GN=EIX2 PE=1 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); -- -- TRINITY_DN7231_c0_g1_i1 14.46794531 6.160697022 22.77519359 3.696853378 1.886297825 0.007590592 0.030227191 Up 0.9389675 0.3022688 0.6004277 2.295774 1.009265 2.163212 XP_019447356.1 PREDICTED: uncharacterized protein LOC109350589 [Lupinus angustifolius] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y65V Retrotransposon protein -- "PF14111.5,PF14392.5" Domain of unknown function (DUF4283)|Zinc knuckle TRINITY_DN7232_c0_g1_i1 29.53341474 54.56286614 4.50396334 0.082546311 -3.59865244 7.16E-05 0.000489835 Down 9.230482 14.87166 5.22253 0.4823196 0.4882566 1.048229 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7233_c0_g1_i1 279.272367 478.5014102 80.04332377 0.167279181 -2.579670195 2.24E-37 1.63E-35 Down 27.55978 32.59112 25.78331 4.927667 2.646097 4.025339 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7242_c0_g1_i2 15.36305998 30.72611997 0 0 #NAME? 2.57E-10 3.91E-09 Down 1.945235 3.842116 3.710795 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7242_c0_g2_i1 3.473350657 6.946701313 0 0 #NAME? 0.015913324 0.056048535 Down 1.609288 0 1.736759 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7243_c0_g1_i1 56.04632137 0 112.0926427 Inf Inf 4.55E-07 4.60E-06 Up 0 0 0 21.98188 13.90372 4.410748 XP_009356815.1 PREDICTED: metallothionein-like protein type 3 [Pyrus x bretschneideri] O24059|MT3_MALDO Metallothionein-like protein type 3 OS=Malus domestica OX=3750 GN=MT2 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YZRT Metallothioneins have a high content of cysteine residues that bind various heavy metals Cellular Component: cell (GO:0005623);|Biological Process: cellular copper ion homeostasis (GO:0006878);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN7244_c0_g1_i1 5.629182472 10.89612971 0.362235236 0.033244395 -4.910745085 0.002523691 0.011760385 Down 1.354055 1.30122 0.6175268 0 0.1294453 0 KYP43089.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN7246_c0_g1_i1 5.291992566 9.129770241 1.454214891 0.159282748 -2.65033808 0.045109439 0.130527853 Down 0.4381187 1.100458 0.923475 0.08241086 0.2395359 0 KYP48573.1 Transposon TX1 uncharacterized [Cajanus cajan] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- "PF03372.22,PF14529.5" Endonuclease/Exonuclease/phosphatase family|Endonuclease-reverse transcriptase TRINITY_DN7266_c0_g1_i1 9.020272605 18.04054521 0 0 #NAME? 2.78E-06 2.48E-05 Down 1.611512 3.15565 2.736051 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7274_c0_g1_i1 14.34459442 21.09118745 7.598001378 0.360245311 -1.472948444 0.035610201 0.10826557 Down 2.066353 1.661045 1.620277 0 0.341367 1.178989 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7281_c0_g1_i1 17.3604564 34.7209128 0 0 #NAME? 0.001291408 0.0065447 Down 4.312414 4.624508 0 0 0 0 KHN00611.1 "Chlorophyll a-b binding protein 6A, chloroplastic [Glycine soja]" Q01667|CAB6_ARATH "Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA1 PE=1 SV=1" gmx:100800350 K08907 LHCA1 light-harvesting complex I chlorophyll a/b binding protein 1 ko00196 Photosynthesis - antenna proteins -- -- -- -- -- O ENOG410XVD6 Chlorophyll A-B binding protein "Biological Process: response to cold (GO:0009409);|Biological Process: response to light stimulus (GO:0009416);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: photosystem I (GO:0009522);|Cellular Component: chloroplast thylakoid (GO:0009534);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: thylakoid (GO:0009579);|Biological Process: response to blue light (GO:0009637);|Biological Process: response to high light intensity (GO:0009644);|Biological Process: response to low light intensity stimulus (GO:0009645);|Biological Process: photosynthesis, light harvesting in photosystem I (GO:0009768);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: response to red light (GO:0010114);|Biological Process: response to far red light (GO:0010218);|Cellular Component: plastoglobule (GO:0010287);|Cellular Component: membrane (GO:0016020);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: chlorophyll binding (GO:0016168);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: protein domain specific binding (GO:0019904);|Molecular Function: metal ion binding (GO:0046872);" PF00504.20 Chlorophyll A-B binding protein TRINITY_DN7288_c0_g1_i1 5.074011908 0.976834689 9.171189128 9.388680842 3.230922466 0.04953523 0.140640023 Up 0.6511536 0 0 0.7082431 2.877391 0.7418913 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7293_c0_g1_i1 5.978044181 10.50714742 1.448940942 0.137900506 -2.858300348 0.022294043 0.074008594 Down 1.470369 1.030236 1.771414 0 0.4900045 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7294_c0_g1_i1 36.52874066 73.05748133 0 0 #NAME? 1.20E-17 3.35E-16 Down 9.70927 16.52209 18.47057 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7299_c0_g1_i1 6.204144027 12.40828805 0 0 #NAME? 0.000173977 0.001096093 Down 2.586217 0.8329395 2.004768 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN72_c0_g1_i1 18.48533854 33.56396733 3.406709736 0.101499018 -3.300462321 2.45E-06 2.21E-05 Down 2.062795 1.782941 1.719326 0.04633477 0.09211441 0.3189762 XP_020552211.1 "glucan endo-1,3-beta-glucosidase-like [Sesamum indicum]" A7PQW3|E13B_VITVI "Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00120 PE=1 SV=2" -- -- -- -- -- -- -- -- -- -- -- G ENOG410YAHP glucan endo-1-3-beta-glucosidase "Biological Process: carbohydrate metabolic process (GO:0005975);|Biological Process: defense response (GO:0006952);|Biological Process: response to biotic stimulus (GO:0009607);|Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);|Cellular Component: anchored component of plasma membrane (GO:0046658);" PF00332.17 Glycosyl hydrolases family 17 TRINITY_DN7323_c0_g1_i1 11.75240593 23.50481186 0 0 #NAME? 4.82E-08 5.55E-07 Down 1.789425 2.391828 3.019741 0 0 0 -- -- P40412|TCPE1_AVESA T-complex protein 1 subunit epsilon OS=Avena sativa OX=4498 PE=2 SV=1 mus:103974618 K09497 CCT5 T-complex protein 1 subunit epsilon -- -- KOG0357 "Chaperonin complex component, TCP-1 epsilon subunit (CCT5)" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0459 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity) Molecular Function: ATP binding (GO:0005524);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: protein folding (GO:0006457);|Molecular Function: unfolded protein binding (GO:0051082); -- -- TRINITY_DN7323_c0_g2_i1 10.73212423 21.46424847 0 0 #NAME? 2.11E-07 2.23E-06 Down 2.578751 4.483669 5.014988 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN732_c0_g1_i1 4.883954592 9.767909183 0 0 #NAME? 0.002033723 0.009778283 Down 2.880252 1.054749 0.8287972 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN733_c0_g1_i1 4.445526344 8.891052689 0 0 #NAME? 0.002041705 0.009812505 Down 0.3633301 2.4995 2.525518 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7340_c0_g1_i1 8.823156281 15.41524703 2.231065533 0.144731092 -2.788553213 0.005712532 0.023741893 Down 2.803144 2.72389 1.817057 0.2743821 0.264743 0.3204768 OMO91741.1 Photosystem II PsbX [Corchorus olitorius] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YXEC Photosystem II reaction centre X protein (PsbX) -- PF06596.10 Photosystem II reaction centre X protein (PsbX) TRINITY_DN7341_c0_g1_i1 6.157596825 12.31519365 0 0 #NAME? 0.000181267 0.001137443 Down 2.948467 1.168951 2.766386 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7342_c0_g1_i1 9.546715964 19.09343193 0 0 #NAME? 2.34E-06 2.11E-05 Down 1.288455 2.51844 3.898535 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7350_c0_g1_i1 7.55729096 2.460390456 12.65419146 5.143163936 2.36265614 0.035713961 0.108547964 Up 0 0 1.58832 2.77941 1.415714 2.106362 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7360_c0_g1_i1 10.7377085 21.08962865 0.385788347 0.018292799 -5.772580316 2.44E-06 2.20E-05 Down 1.265637 1.712735 1.215259 0 0 0.08295439 PPR85315.1 hypothetical protein GOBAR_AA35374 [Gossypium barbadense] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7363_c0_g1_i1 6.513334947 13.02666989 0 0 #NAME? 0.001155865 0.005929279 Down 1.815442 4.418446 1.064594 0 0 0 KYP43037.1 Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN7375_c0_g1_i1 3.239274694 6.478549387 0 0 #NAME? 0.012439475 0.045673673 Down 0.4128431 2.014641 1.571715 0 0 0 ADR83418.1 "eukaryotic translation elongation factor 2, partial [synthetic construct]" O14460|EF2_SCHPO Elongation factor 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=eft201 PE=1 SV=2 -- -- -- -- -- -- KOG0469 Elongation factor 2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0480 "Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)" Biological Process: cytoplasmic translational elongation (GO:0002182);|Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: cytosol (GO:0005829);|Biological Process: translational elongation (GO:0006414); PF14492.5 "Elongation Factor G, domain II" TRINITY_DN7375_c1_g1_i1 6.031477106 12.06295421 0 0 #NAME? 0.000202812 0.001259407 Down 0.9462081 0.6169077 1.425887 0 0 0 ADR83418.1 "eukaryotic translation elongation factor 2, partial [synthetic construct]" Q96X45|EF2_NEUCR Elongation factor 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cot-3 PE=3 SV=3 -- -- -- -- -- -- KOG0469 Elongation factor 2 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG0480 "Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)" Molecular Function: translation elongation factor activity (GO:0003746);|Molecular Function: GTPase activity (GO:0003924);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: translational elongation (GO:0006414); -- -- TRINITY_DN7389_c0_g1_i2 19.99100769 31.79804557 8.183969815 0.25737336 -1.958065366 0.00135606 0.00683496 Down 7.24542 4.456102 5.662687 0.7415653 1.494914 1.458294 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN738_c0_g1_i1 19.2217416 37.70846484 0.735018369 0.019492132 -5.680964303 1.93E-10 2.98E-09 Down 5.051203 4.10382 3.079163 0.1624974 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7393_c0_g1_i1 15.48207706 30.96415412 0 0 #NAME? 3.23E-10 4.85E-09 Down 8.28017 6.238775 4.652021 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7402_c0_g1_i1 4.948848569 8.805717482 1.091979655 0.124008027 -3.011494581 0.032971932 0.101809055 Down 1.055132 0.7390052 1.249412 0.1001062 0.200522 0 PIM99577.1 hypothetical protein CDL12_27926 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YM95 membrane-associated kinase regulator -- -- -- TRINITY_DN7404_c0_g1_i1 4.59967068 9.19934136 0 0 #NAME? 0.018690572 0.064089826 Down 2.118757 3.163532 0 0 0 0 KHN11289.1 Beta-galactosidase 1 [Glycine soja] Q9SCW1|BGAL1_ARATH Beta-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BGAL1 PE=2 SV=1 -- -- -- -- -- -- KOG0496 Beta-galactosidase [G] METABOLISM Carbohydrate transport and metabolism G COG1874 beta-galactosidase Molecular Function: beta-galactosidase activity (GO:0004565);|Cellular Component: cell wall (GO:0005618);|Cellular Component: vacuole (GO:0005773);|Biological Process: carbohydrate metabolic process (GO:0005975);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: carbohydrate binding (GO:0030246);|Cellular Component: apoplast (GO:0048046); PF02140.17 Galactose binding lectin domain TRINITY_DN7404_c1_g1_i1 8.154354098 16.3087082 0 0 #NAME? 0.0064341 0.026264668 Down 2.428305 1.730812 0 0 0 0 KHN11289.1 Beta-galactosidase 1 [Glycine soja] Q9SCW1|BGAL1_ARATH Beta-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BGAL1 PE=2 SV=1 -- -- -- -- -- -- KOG0496 Beta-galactosidase [G] METABOLISM Carbohydrate transport and metabolism G COG1874 beta-galactosidase Molecular Function: beta-galactosidase activity (GO:0004565);|Cellular Component: cell wall (GO:0005618);|Cellular Component: vacuole (GO:0005773);|Biological Process: carbohydrate metabolic process (GO:0005975);|Cellular Component: plant-type cell wall (GO:0009505);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: carbohydrate binding (GO:0030246);|Cellular Component: apoplast (GO:0048046); -- -- TRINITY_DN7412_c0_g1_i1 45.09151066 5.788319405 84.39470191 14.58017362 3.865935995 5.99E-17 1.60E-15 Up 0.07162831 0.207271 0.2980391 2.215972 2.193339 2.377549 XP_011072225.1 "probable acyl-activating enzyme 1, peroxisomal [Sesamum indicum]" Q9SEY5|AAE2_ARATH Probable acyl-activating enzyme 2 OS=Arabidopsis thaliana OX=3702 GN=AAE2 PE=2 SV=1 -- -- -- -- -- -- KOG1176 Acyl-CoA synthetase [I] METABOLISM Lipid transport and metabolism IQ COG0318 Amp-dependent synthetase and ligase Biological Process: fatty acid metabolic process (GO:0006631);|Molecular Function: ligase activity (GO:0016874); "PF00501.27,PF13193.5" AMP-binding enzyme|AMP-binding enzyme C-terminal domain TRINITY_DN7414_c0_g1_i2 4.198147346 8.396294693 0 0 #NAME? 0.013655599 0.049427366 Down 0.7770706 3.069249 0.7959677 0 0 0 XP_022851014.1 uncharacterized protein LOC111372831 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- PF03732.16 Retrotransposon gag protein TRINITY_DN7419_c0_g1_i1 7.572945044 1.78832395 13.35756614 7.469321283 2.900977155 0.009597375 0.036813726 Up 0 0.1447851 0.5756644 1.282181 1.518368 1.338698 XP_023899320.1 protein HEADING DATE 3A-like [Quercus suber] Q93WI9|HD3A_ORYSJ Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV=1 jcu:105644921 K16223 FT protein FLOWERING LOCUS T ko04712 Circadian rhythm - plant KOG3346 Phosphatidylethanolamine binding protein [R] POORLY CHARACTERIZED General function prediction only S COG1881 phosphatidylethanolamine-binding protein "Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Molecular Function: phosphatidylethanolamine binding (GO:0008429);|Biological Process: flower development (GO:0009908);|Biological Process: regulation of flower development (GO:0009909);|Biological Process: inflorescence development (GO:0010229);|Biological Process: cell differentiation (GO:0030154);|Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);|Biological Process: short-day photoperiodism (GO:0048572);|Biological Process: short-day photoperiodism, flowering (GO:0048575);" PF01161.19 Phosphatidylethanolamine-binding protein TRINITY_DN7421_c0_g1_i1 5.345226425 9.183857788 1.506595062 0.16404817 -2.607808596 0.044037259 0.128041462 Down 1.6119 1.53717 1.972878 0.3340162 0 0.3543574 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7424_c0_g1_i1 4.118014279 8.236028558 0 0 #NAME? 0.027463671 0.087755767 Down 1.802231 3.517564 0 0 0 0 KRH56602.1 hypothetical protein GLYMA_05G007100 [Glycine max] P17067|CAHC_PEA "Carbonic anhydrase, chloroplastic OS=Pisum sativum OX=3888 PE=1 SV=1" gmx:100500448 K01673 "cynT, can" carbonic anhydrase ko00910 Nitrogen metabolism KOG1578 Predicted carbonic anhydrase involved in protection against oxidative damage [P] METABOLISM Inorganic ion transport and metabolism P COG0288 carbonic anhydrase Molecular Function: carbonate dehydratase activity (GO:0004089);|Molecular Function: zinc ion binding (GO:0008270);|Cellular Component: chloroplast stroma (GO:0009570);|Biological Process: carbon utilization (GO:0015976); PF00484.18 Carbonic anhydrase TRINITY_DN7432_c0_g1_i1 44.76332094 13.19005364 76.33658824 5.787435771 2.532924277 6.87E-10 9.95E-09 Up 2.909626 2.785116 2.380415 14.01497 10.15439 13.81298 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7441_c0_g1_i1 8.949234389 15.28934616 2.609122615 0.170649718 -2.550890062 0.009872622 0.037670115 Down 2.938286 1.962628 1.348962 0.5411128 0 0.3006263 PIN05338.1 "putative membrane protein, predicted efflux pump [Handroanthus impetiginosus]" Q9LS19|DTX30_ARATH Protein DETOXIFICATION 30 OS=Arabidopsis thaliana OX=3702 GN=DTX30 PE=2 SV=1 aip:107633791 K03327 "TC.MATE, SLC47A, norM, mdtK, dinF" "multidrug resistance protein, MATE family" -- -- KOG1347 "Uncharacterized membrane protein, predicted efflux pump" [R] POORLY CHARACTERIZED General function prediction only V COG0534 Mate efflux family protein Cellular Component: vacuolar membrane (GO:0005774);|Biological Process: drug transmembrane transport (GO:0006855);|Biological Process: response to nematode (GO:0009624);|Molecular Function: drug transmembrane transporter activity (GO:0015238);|Molecular Function: antiporter activity (GO:0015297);|Cellular Component: integral component of membrane (GO:0016021); PF01554.17 MatE TRINITY_DN7442_c0_g1_i1 21.00431846 6.439542531 35.56909439 5.523543672 2.465594136 5.42E-05 0.00038096 Up 0.6455747 1.019761 1.309792 5.322826 4.221682 3.571612 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7449_c0_g1_i1 14.38036233 21.11159313 7.649131536 0.362319011 -1.46466759 0.042476332 0.124499783 Down 1.209637 2.754969 2.987648 0.7471639 1.251962 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7465_c0_g1_i1 12.8697811 21.18076137 4.558800827 0.215233095 -2.216028165 0.003540007 0.015740185 Down 2.940992 2.146902 4.008911 0 0.395819 1.19364 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN746_c0_g1_i1 13.45407257 19.74549564 7.162649493 0.362748529 -1.462958332 0.049422399 0.140372355 Down 2.998989 4.353795 1.933993 0.5565366 0.5657722 1.570464 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7480_c0_g1_i1 8.66155951 2.211671506 15.11144751 6.832591311 2.772432835 0.003446743 0.015394156 Up 0.3401181 0.6563973 0 2.417136 2.119705 0.9663478 EYU41778.1 hypothetical protein MIMGU_mgv1a021822mg [Erythranthe guttata] Q3E9B8|AB23G_ARATH ABC transporter G family member 23 OS=Arabidopsis thaliana OX=3702 GN=ABCG23 PE=2 SV=1 -- -- -- -- -- -- KOG0061 "Transporter, ABC superfamily (Breast cancer resistance protein)" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1131 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: transmembrane transport (GO:0055085);" PF01061.23 ABC-2 type transporter TRINITY_DN7483_c0_g1_i1 6.711845948 13.4236919 0 0 #NAME? 7.36E-05 0.000502332 Down 0.9533958 2.14346 2.718612 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7483_c0_g2_i1 7.562825075 13.62960298 1.496047164 0.109764545 -3.187515975 0.004548853 0.019559164 Down 3.075493 2.193661 2.743656 0 0.4203535 0.4267589 -- -- P55004|PHYE_IPONI Phytochrome E OS=Ipomoea nil OX=35883 GN=PHYE PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Molecular Function: phosphorelay sensor kinase activity (GO:0000155);|Cellular Component: intracellular (GO:0005622);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: detection of visible light (GO:0009584);|Biological Process: red, far-red light phototransduction (GO:0009585);|Molecular Function: photoreceptor activity (GO:0009881);|Biological Process: protein-tetrapyrrole linkage (GO:0017006);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: protein homodimerization activity (GO:0042803);" -- -- TRINITY_DN7490_c0_g1_i2 19.08664242 31.75620162 6.417083227 0.202073387 -2.307048762 0.011520533 0.042826268 Down 2.588113 3.734999 7.523297 0 0.755828 1.454193 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7496_c0_g1_i1 10.86696496 2.903460292 18.83046963 6.485526831 2.697223772 0.001110113 0.005727593 Up 0.709725 0.2313055 0 1.197552 2.191681 1.169858 XP_007213178.1 uncharacterized protein LOC18781510 [Prunus persica] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YHQZ expressed protein -- PF14009.5 Domain of unknown function (DUF4228) TRINITY_DN7499_c0_g1_i1 28.95278687 55.72688838 2.178685362 0.039095766 -4.676843832 2.44E-13 4.97E-12 Down 3.987174 5.739322 6.442266 0.1051967 0.4141575 0 AEK66117.1 cytochrome c oxidase subunit II (mitochondrion) [Cloning vector pRS316-1B9] P26857|COX2_MARPO Cytochrome c oxidase subunit 2 OS=Marchantia polymorpha OX=3197 GN=COX2 PE=3 SV=3 csl:CospCoM_p09 K02261 COX2 cytochrome c oxidase subunit 2 ko00190 Oxidative phosphorylation KOG4767 "Cytochrome c oxidase, subunit II, and related proteins" [C] METABOLISM Energy production and conversion C COG1622 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (By similarity) Molecular Function: cytochrome-c oxidase activity (GO:0004129);|Molecular Function: copper ion binding (GO:0005507);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: respiratory chain (GO:0070469); -- -- TRINITY_DN750_c0_g1_i1 6.638692676 13.27738535 0 0 #NAME? 0.001544194 0.007670781 Down 4.029743 1.105841 1.380492 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- U ENOG4110P9R CD52 molecule -- -- -- TRINITY_DN7517_c0_g1_i1 16.03554678 32.07109357 0 0 #NAME? 1.31E-10 2.06E-09 Down 4.397322 7.355587 4.25974 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7537_c0_g1_i1 28.4408116 0 56.8816232 Inf Inf 2.97E-20 9.86E-19 Up 5.13E-22 7.31E-45 0 4.349226 4.631447 4.833062 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7540_c0_g1_i1 55.62377043 79.40100385 31.84653701 0.401084816 -1.318020745 0.000188046 0.001176242 Down 3.007781 2.882562 2.82668 0.6359117 1.294576 0.8695182 XP_012832116.1 PREDICTED: protein NRT1/ PTR FAMILY 5.5-like [Erythranthe guttata] O80436|PTR29_ARATH Protein NRT1/ PTR FAMILY 5.5 OS=Arabidopsis thaliana OX=3702 GN=NPF5.5 PE=2 SV=1 sind:105174544 K14638 "SLC15A3_4, PHT" "solute carrier family 15 (peptide/histidine transporter), member 3/4" -- -- KOG1237 H+/oligopeptide symporter [E] METABOLISM Amino acid transport and metabolism E COG3104 transporter Molecular Function: peptide:proton symporter activity (GO:0015333);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oligopeptide transmembrane transporter activity (GO:0035673);|Molecular Function: peptide transmembrane transporter activity (GO:1904680); PF00854.20 POT family TRINITY_DN7549_c0_g1_i1 11.19418262 20.55081933 1.837545922 0.089414728 -3.483343703 0.001496612 0.007462183 Down 5.803185 1.615135 5.209632 0.8365607 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN754_c0_g1_i1 51.80807325 71.98770942 31.62843708 0.439358848 -1.186528347 0.001132905 0.005829114 Down 4.056099 4.844537 3.723732 1.267823 1.501501 1.68039 PIM99551.1 Loganate O-methyltransferase [Handroanthus impetiginosus] Q9FKR0|MT878_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana OX=3702 GN=At5g38780 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111PH9 methyltransferase Molecular Function: methyltransferase activity (GO:0008168);|Molecular Function: metal ion binding (GO:0046872); PF03492.14 SAM dependent carboxyl methyltransferase TRINITY_DN7554_c0_g1_i1 16.82876898 1.621857421 32.03568053 19.75246413 4.303960736 7.27E-08 8.18E-07 Up 0.1482156 0.1442505 0.3489359 4.41765 2.140836 3.692631 PIN12621.1 "Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) [Handroanthus impetiginosus]" Q9FNR1|RBG3_ARATH "Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG3 PE=1 SV=1" sind:105168868 K12741 HNRNPA1_3 heterogeneous nuclear ribonucleoprotein A1/A3 ko03040 Spliceosome KOG0118 FOG: RRM domain [R] POORLY CHARACTERIZED General function prediction only S ENOG41121QZ Glycine-rich RNA-binding protein Molecular Function: single-stranded DNA binding (GO:0003697);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: copper ion binding (GO:0005507);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: mitochondrion (GO:0005739);|Biological Process: mRNA processing (GO:0006397);|Biological Process: response to cold (GO:0009409);|Biological Process: cytidine to uridine editing (GO:0016554);|Biological Process: mitochondrial mRNA modification (GO:0080156);|Cellular Component: ribonucleoprotein complex (GO:1990904); PF00076.21 "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)" TRINITY_DN7559_c0_g1_i2 32.3868614 64.7737228 0 0 #NAME? 7.86E-21 2.72E-19 Down 5.973806 6.284485 5.494413 0 0 0 XP_012481063.1 PREDICTED: uncharacterized protein LOC105795961 [Gossypium raimondii] P93293|M300_ARATH Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 GN=AtMg00300 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN7573_c0_g1_i1 7.306100181 14.61220036 0 0 #NAME? 3.40E-05 0.000249143 Down 2.030284 3.303625 3.181627 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN757_c0_g1_i1 2.531862078 5.063724155 0 0 #NAME? 0.035058385 0.106961173 Down 0.5551113 1.111754 1.361214 0 0 0 -- -- -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN7582_c0_g1_i1 8.705956207 15.96297147 1.448940942 0.090768874 -3.461658533 0.004599525 0.019741513 Down 4.426329 1.238537 2.414132 0 0.5649768 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7602_c0_g1_i1 2.21806032 0 4.436120639 Inf Inf 0.0416396 0.122529907 Up 0 0 0 1.350063 0.2761243 0.3000872 PIN14539.1 hypothetical protein CDL12_12835 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7614_c0_g1_i1 13.30631222 26.61262443 0 0 #NAME? 6.35E-09 8.22E-08 Down 3.270148 3.134908 2.839281 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7624_c0_g1_i1 20.83511267 13.04443049 28.62579485 2.194484065 1.133881794 0.047391155 0.13571552 Up 1.143295 1.017075 1.051904 1.646443 2.018131 1.983891 PIN27088.1 hypothetical protein CDL12_00146 [Handroanthus impetiginosus] Q56XJ7|Y4276_ARATH Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1 -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN7650_c0_g1_i1 3.511017561 7.022035121 0 0 #NAME? 0.009838694 0.037570991 Down 1.560623 1.958135 0.6099233 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7655_c0_g1_i1 4.490778468 0 8.981556936 Inf Inf 0.002801955 0.0128982 Up 0 0 0 0.1655411 1.308829 1.502523 AOQ11326.1 Tm2-RA [synthetic construct] -- -- -- -- -- -- -- -- KOG1003 Actin filament-coating protein tropomyosin [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z ENOG410XR5K Tropomyosin -- "PF12718.6,PF00261.19" Tropomyosin like|Tropomyosin TRINITY_DN7664_c0_g1_i2 31.14903671 44.46009704 17.83797637 0.401213168 -1.31755914 0.005747646 0.023870347 Down 7.793779 6.959315 5.669359 1.916482 2.391388 2.348389 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7665_c0_g1_i1 9.201113512 2.897259899 15.50496712 5.35159691 2.419969454 0.008932268 0.034669724 Up 0.2772102 0.2667028 0.3246018 1.345332 1.642655 0.8627371 XP_022860306.1 uncharacterized protein LOC111380876 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN7668_c0_g1_i1 15.22444951 7.332565993 23.11633303 3.152557107 1.656522504 0.012102146 0.044630165 Up 0.5422741 3.205025 0.4285405 3.794899 2.878282 4.151279 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7669_c0_g1_i1 26.45559875 52.91119751 0 0 #NAME? 3.06E-17 8.38E-16 Down 2.739451 2.174288 2.889214 0 0 0 XP_012854768.1 PREDICTED: WAT1-related protein At1g21890-like [Erythranthe guttata] Q501F8|WTR32_ARATH WAT1-related protein At4g08300 OS=Arabidopsis thaliana OX=3702 GN=At4g08300 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YBPN Auxin-induced protein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); -- -- TRINITY_DN7678_c0_g1_i1 4.280980775 0.325611563 8.236349986 25.2950169 4.660781298 0.007097777 0.028593309 Up 0.1992022 0 0 0.7767647 0.8449319 1.451356 XP_017412820.1 "PREDICTED: AT-hook motif nuclear-localized protein 20-like, partial [Vigna angularis]" Q8GWQ2|AHL20_ARATH AT-hook motif nuclear-localized protein 20 OS=Arabidopsis thaliana OX=3702 GN=AHL20 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y9GR Domain of unknown function (DUF296) Molecular Function: AT DNA binding (GO:0003680);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: defense response to bacterium (GO:0042742);|Biological Process: innate immune response (GO:0045087);|Biological Process: negative regulation of innate immune response (GO:0045824);|Biological Process: negative regulation of defense response to bacterium (GO:1900425); PF03479.14 Domain of unknown function (DUF296) TRINITY_DN7683_c0_g1_i1 3029.748159 6059.496318 0 0 #NAME? 0 0 Down 1197.226 1301.017 1255.581 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7687_c0_g1_i1 28.14173272 14.42644926 41.85701618 2.901408062 1.536753214 0.001760512 0.008604106 Up 3.139557 2.073573 2.080542 6.465412 3.594968 7.26592 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN768_c0_g1_i1 21.27839336 41.45425917 1.102527553 0.026596243 -5.232633722 5.41E-11 8.88E-10 Down 4.477188 3.545089 4.65398 0.2588143 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN770_c0_g1_i1 147.1283419 61.03060837 233.2260755 3.821460767 1.934124219 4.21E-15 9.82E-14 Up 8.545816 8.690789 6.476069 21.08405 28.95584 22.85314 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7723_c0_g1_i1 14.01870812 28.03741624 0 0 #NAME? 0.000239171 0.001459039 Down 0.8588689 6.027273 3.655391 0 0 0 XP_011096694.1 uncharacterized protein LOC105175800 [Sesamum indicum] Q9SUC3|MS5_ARATH Protein POLLENLESS 3 OS=Arabidopsis thaliana OX=3702 GN=MS5 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG4110VSD male sterility MS5 Cellular Component: nucleus (GO:0005634);|Biological Process: male meiotic nuclear division (GO:0007140);|Biological Process: microsporogenesis (GO:0009556);|Biological Process: cell division (GO:0051301);|Biological Process: meiotic cell cycle (GO:0051321); -- -- TRINITY_DN7732_c0_g1_i1 32.82926312 53.30681789 12.35170835 0.231709729 -2.109609471 0.000119599 0.000779573 Down 5.397876 3.095886 3.162799 0.2763775 0.831355 1.086526 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7743_c0_g1_i1 5.575811937 10.06491817 1.086705707 0.107969651 -3.211302244 0.020292477 0.068572231 Down 2.212838 2.674855 0.8622829 0 0.5033351 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN774_c0_g1_i1 15.20047305 30.40094611 0 0 #NAME? 3.80E-10 5.67E-09 Down 1.324889 1.433485 1.395215 0 0 0 XP_013751699.1 uncharacterized protein LOC106454066 [Brassica napus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111MDI ZnF_PMZ -- -- -- TRINITY_DN776_c0_g1_i2 2.7006494 5.401298801 0 0 #NAME? 0.038343741 0.114637255 Down 0 1.674325 0.9915718 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7776_c0_g1_i1 9.956930255 15.49637835 4.41748216 0.285065456 -1.81063487 0.044482138 0.129020938 Down 4.698628 2.332031 2.311272 0 1.522113 0.5592954 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN777_c0_g1_i1 2.797404551 5.594809103 0 0 #NAME? 0.023528494 0.077264626 Down 0.278833 1.619834 1.508923 0 0 0 XP_011097977.1 protein NDR1 [Sesamum indicum] O48915|NDR1_ARATH Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG41113EN disease resistance "Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: defense response, incompatible interaction (GO:0009814);|Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);|Biological Process: defense response to fungus, incompatible interaction (GO:0009817);|Biological Process: positive regulation of cell death (GO:0010942);|Cellular Component: membrane (GO:0016020);|Biological Process: defense response to bacterium (GO:0042742);|Cellular Component: anchored component of plasma membrane (GO:0046658);" -- -- TRINITY_DN7787_c0_g1_i2 48.90007819 92.26432483 5.535831559 0.059999697 -4.058900968 1.56E-18 4.64E-17 Down 13.54837 12.13806 10.95619 0.6650686 0.6653346 0.3607664 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7810_c0_g1_i1 16.49575548 32.99151097 0 0 #NAME? 0.000701822 0.003812113 Down 9.021132 0.4635321 10.87631 5.84E-76 1.58E-62 2.53E-18 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7811_c0_g1_i1 3.492386251 0 6.984772501 Inf Inf 0.00528497 0.022213022 Up 0 0 0 0.6310668 1.140839 0.3348823 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7833_c0_g1_i1 27.43742215 40.7400682 14.1347761 0.346950232 -1.527199365 0.002439333 0.01142121 Down 2.526859 3.135002 2.970501 1.334455 0.3941102 0.7694427 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7835_c0_g1_i1 15.50292044 31.00584089 0 0 #NAME? 2.68E-10 4.07E-09 Down 2.677097 2.111376 2.137461 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7838_c0_g1_i1 3.353001729 6.343768222 0.362235236 0.057100957 -4.130341268 0.044198965 0.12842115 Down 0.64546 2.168976 0.4921619 0 0.1975887 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7851_c0_g1_i1 4.343038831 0.976834689 7.709242972 7.892065118 2.98040286 0.03522335 0.107359924 Up 0.5177506 0 0 1.092675 2.229717 0.5616188 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7856_c0_g1_i1 17.72965523 35.45931046 0 0 #NAME? 1.31E-11 2.29E-10 Down 3.587795 4.502712 2.371433 0 0 0 -- -- F4JNY0|APE2_ARATH DNA-(apurinic or apyrimidinic site) lyase 2 OS=Arabidopsis thaliana OX=3702 GN=APE2 PE=1 SV=1 -- -- -- -- -- -- KOG1294 Apurinic/apyrimidinic endonuclease and related enzymes [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " -- -- -- Molecular Function: DNA-(apurinic or apyrimidinic site) endonuclease activity (GO:0003906);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: phosphodiesterase I activity (GO:0004528);|Cellular Component: nucleus (GO:0005634);|Biological Process: base-excision repair (GO:0006284);|Molecular Function: zinc ion binding (GO:0008270);|Molecular Function: double-stranded DNA 3'-5' exodeoxyribonuclease activity (GO:0008311);|Molecular Function: class I DNA-(apurinic or apyrimidinic site) endonuclease activity (GO:0140078); -- -- TRINITY_DN7866_c0_g1_i1 22.87679704 33.05792965 12.69566442 0.384042938 -1.380660475 0.011342938 0.042266457 Down 4.312608 7.067342 6.277626 0.7635991 2.108334 2.541573 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7867_c0_g1_i2 15.55699058 31.11398116 0 0 #NAME? 2.78E-10 4.22E-09 Down 3.218639 4.873321 2.612633 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7871_c0_g1_i1 7.583077152 0.651223126 14.51493118 22.28872195 4.478241989 0.00022044 0.001356621 Up 0.4219981 0 0 1.752588 2.148559 2.354125 PIN19331.1 hypothetical protein CDL12_07991 [Handroanthus impetiginosus] A7R333|CSPLB_VITVI CASP-like protein 1C1 OS=Vitis vinifera OX=29760 GN=GSVIVT00013434001 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZRZJ CASP-like protein Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN7874_c0_g1_i1 8.891271541 17.78254308 0 0 #NAME? 3.39E-06 2.98E-05 Down 0.9734637 1.152808 1.25052 0 0 0 XP_011069749.1 uncharacterized protein LOC105155556 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZJGG Transposon protein -- PF04434.16 SWIM zinc finger TRINITY_DN7874_c0_g2_i1 6.672059689 13.34411938 0 0 #NAME? 7.63E-05 0.000519418 Down 0.8820666 2.320104 2.92103 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7895_c0_g1_i1 2.537283069 5.074566137 0 0 #NAME? 0.042995217 0.125704101 Down 1.168655 1.996869 0 0 0 0 ACU15367.1 unknown [Glycine max] P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max OX=3847 PE=2 SV=1 -- -- -- -- -- -- KOG0381 HMG box-containing protein [R] POORLY CHARACTERIZED General function prediction only B COG5648 high mobility group Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634); "PF00505.18,PF09011.9" HMG (high mobility group) box|HMG-box domain TRINITY_DN790_c0_g1_i1 16.62172706 23.63691312 9.606541013 0.406421133 -1.298952673 0.043694302 0.127341663 Down 3.464982 5.120495 5.587433 0 3.242072 1.578939 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7911_c0_g1_i1 10.98891068 20.14027544 1.837545922 0.091237378 -3.454231204 0.000298684 0.001784205 Down 5.184781 2.85573 2.269871 0.8137677 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7921_c0_g1_i1 5.05098167 10.10196334 0 0 #NAME? 0.000859164 0.004563545 Down 1.48725 1.228131 2.293075 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN792_c0_g1_i1 7.670158051 15.3403161 0 0 #NAME? 2.48E-05 0.000185893 Down 1.795285 2.420709 0.9880784 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7937_c0_g1_i1 4.498689391 0 8.997378782 Inf Inf 0.001128177 0.005806934 Up 0.03165391 0.01469678 4.57E-75 0.455261 0.9068535 1.391396 PIN08227.1 Serine carboxypeptidases (lysosomal cathepsin A) [Handroanthus impetiginosus] Q9M099|SCP24_ARATH Serine carboxypeptidase 24 OS=Arabidopsis thaliana OX=3702 GN=SCPL24 PE=1 SV=1 sind:105162924 K16297 SCPL-II serine carboxypeptidase-like clade II -- -- KOG1282 Serine carboxypeptidases (lysosomal cathepsin A) [OE] CELLULAR PROCESSES AND SIGNALING|METABOLISM "Posttranslational modification, protein turnover, chaperones |Amino acid transport and metabolism " E COG2939 carboxy-peptidase Molecular Function: serine-type carboxypeptidase activity (GO:0004185);|Cellular Component: extracellular space (GO:0005615);|Biological Process: proteolysis (GO:0006508);|Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);|Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603); -- -- TRINITY_DN7939_c1_g1_i1 44.98517457 63.48704064 26.48330849 0.417145109 -1.261378764 0.000962843 0.005048087 Down 3.227836 4.549542 4.714745 0.6189466 1.694666 1.853002 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7939_c1_g3_i1 20.94955285 34.51799696 7.381108746 0.213833635 -2.225439298 0.000229018 0.001402752 Down 8.019181 4.699912 7.646051 1.318866 1.323977 0.6866579 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7940_c0_g1_i1 8.794276046 0.246039046 17.34251305 70.4868327 6.139281875 8.18E-06 6.72E-05 Up 0 0 0.1028181 1.726225 1.558108 0.8855284 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7940_c0_g2_i1 6.562360482 0.651223126 12.47349784 19.15395407 4.259570342 0.0008616 0.004574341 Up 0.3267525 0 5.74E-89 2.048353 3.071453 0.6976037 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7943_c0_g2_i1 70.59654537 45.74818082 95.44490992 2.086310498 1.060953885 0.000665024 0.003636605 Up 1.141335 0.9367077 1.325412 1.626964 2.126176 1.94786 PKA62506.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Apostasia shenzhenica] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410ZK3M NA Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); "PF00665.25,PF07727.13" Integrase core domain|Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN7947_c0_g1_i1 26.0830571 10.41913231 41.74698189 4.006761854 2.002436764 8.46E-05 0.000569566 Up 1.103789 0.3578488 0.2758545 1.965743 1.514071 2.13911 ATJ03032.1 Ycf2 (chloroplast) [Liparis loeselii] Q3BAH3|YCF2_PHAAO Protein Ycf2 OS=Phalaenopsis aphrodite subsp. formosana OX=308872 GN=ycf2-A PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YES0 function. Its presence in a non-photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis Molecular Function: ATP binding (GO:0005524);|Cellular Component: chloroplast stroma (GO:0009570); -- -- TRINITY_DN7950_c0_g1_i1 6.131113602 12.2622272 0 0 #NAME? 0.000418604 0.002413771 Down 0.9173931 2.058656 3.754747 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7950_c1_g1_i1 3.425463502 6.850927004 0 0 #NAME? 0.010577736 0.039863445 Down 1.722316 0.9707934 0.9480435 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7954_c0_g1_i1 4.358632333 8.717264667 0 0 #NAME? 0.00259858 0.012069716 Down 0.8662778 1.692511 1.153208 0 0 0 KMS97068.1 hypothetical protein BVRB_7g179290 [Beta vulgaris subsp. vulgaris] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y1CH Reverse transcriptase (RNA-dependent DNA polymerase) -- -- -- TRINITY_DN7954_c1_g1_i1 5.054642417 10.10928483 0 0 #NAME? 0.000790786 0.004241542 Down 1.001265 1.47456 3.17516 0 0 0 XP_023896927.1 uncharacterized protein LOC112008817 [Quercus suber] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN7956_c0_g1_i1 26.5296253 40.70754225 12.35170835 0.303425549 -1.720585528 0.008386462 0.032888696 Down 4.100062 4.985998 9.360494 0.578872 1.743266 2.245198 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7960_c0_g1_i1 7.277153068 0 14.55430614 Inf Inf 1.30E-05 0.000103368 Up 0 0 0 1.174792 0.8220411 1.342983 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7970_c0_g1_i1 10.79551237 21.59102474 0 0 #NAME? 1.03E-06 9.86E-06 Down 5.141324 1.999787 2.816493 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7975_c0_g1_i1 9.931273481 16.84935684 3.013190124 0.178831166 -2.483329912 0.006334012 0.025898017 Down 1.989654 5.283525 3.217603 0.7208907 0 0.7127565 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN797_c0_g1_i1 8.50759825 15.17765058 1.837545922 0.121069194 -3.046096277 0.003137068 0.014198915 Down 1.213743 2.988116 3.284209 0.745026 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7983_c0_g1_i1 9.861087525 15.62227922 4.099895831 0.262439032 -1.929945792 0.031059198 0.096964936 Down 1.76427 1.281767 1.219204 0.296311 0.2218007 0.3378866 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN7990_c0_g1_i1 13.34154686 21.54114108 5.141952631 0.238703819 -2.06670645 0.006980925 0.028187611 Down 3.110248 5.47093 3.862737 3.37E-08 1.857168 0.6175178 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8006_c0_g1_i2 15.10583726 30.21167452 0 0 #NAME? 3.80E-10 5.68E-09 Down 5.569841 3.991433 6.466091 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8011_c0_g1_i1 19.78836736 2.904581393 36.67215333 12.62562427 3.658282818 6.88E-05 0.000472293 Up 0 0.2890985 0.6984978 1.726536 3.442364 4.929536 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8012_c0_g1_i1 7.055464852 12.61488254 1.496047164 0.118593824 -3.07589921 0.006468018 0.02638177 Down 0.9779978 1.162896 2.712202 0 0.210393 0.2143507 XP_020552648.1 DNA polymerase epsilon catalytic subunit A [Sesamum indicum] F4HW04|DPOE1_ARATH DNA polymerase epsilon catalytic subunit A OS=Arabidopsis thaliana OX=3702 GN=POL2A PE=1 SV=1 sind:105171162 K02324 POLE1 DNA polymerase epsilon subunit 1 ko03030|ko03420|ko00230|ko00240|ko03410 DNA replication|Nucleotide excision repair|Purine metabolism|Pyrimidine metabolism|Base excision repair KOG1798 "DNA polymerase epsilon, catalytic subunit A" [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " L COG0417 DNA polymerase "Molecular Function: nucleotide binding (GO:0000166);|Biological Process: mitotic cell cycle (GO:0000278);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Biological Process: leading strand elongation (GO:0006272);|Biological Process: base-excision repair, gap-filling (GO:0006287);|Biological Process: nucleotide-excision repair, DNA gap filling (GO:0006297);|Molecular Function: zinc ion binding (GO:0008270);|Molecular Function: single-stranded DNA 3'-5' exodeoxyribonuclease activity (GO:0008310);|Cellular Component: epsilon DNA polymerase complex (GO:0008622);|Biological Process: embryonic root morphogenesis (GO:0010086);|Biological Process: DNA replication proofreading (GO:0045004);|Cellular Component: apoplast (GO:0048046);|Biological Process: negative regulation of long-day photoperiodism, flowering (GO:0048579);|Biological Process: regulation of cell division (GO:0051302);|Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);" PF03104.18 "DNA polymerase family B, exonuclease domain" TRINITY_DN8023_c0_g1_i1 58.90896563 97.87156954 19.94636171 0.203801388 -2.294764218 7.57E-08 8.49E-07 Down 23.50414 14.01234 16.71704 3.890751 3.03175 1.871209 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8025_c0_g2_i1 9.370219877 3.096970594 15.64346916 5.051216562 2.336630896 0.008609478 0.033655657 Up 1.052153 0 0.2017558 1.285574 1.935716 2.07403 XP_011081156.1 protein DETOXIFICATION 49 [Sesamum indicum] O82752|DTX49_ARATH Protein DETOXIFICATION 49 OS=Arabidopsis thaliana OX=3702 GN=DTX49 PE=2 SV=1 sind:105164240 K03327 "TC.MATE, SLC47A, norM, mdtK, dinF" "multidrug resistance protein, MATE family" -- -- KOG1347 "Uncharacterized membrane protein, predicted efflux pump" [R] POORLY CHARACTERIZED General function prediction only V COG0534 Mate efflux family protein Biological Process: drug transmembrane transport (GO:0006855);|Molecular Function: drug transmembrane transporter activity (GO:0015238);|Molecular Function: antiporter activity (GO:0015297);|Cellular Component: integral component of membrane (GO:0016021); PF01554.17 MatE TRINITY_DN8028_c0_g1_i1 73.12831553 105.3701644 40.8864667 0.38802698 -1.365771125 9.57E-06 7.77E-05 Down 2.259916 1.923283 1.905434 0.7005837 0.5663082 0.6387066 XP_022032684.1 uncharacterized protein LOC110933787 [Helianthus annuus] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS82 Retrotransposon protein Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); "PF13966.5,PF00078.26" zinc-binding in reverse transcriptase|Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN8032_c0_g1_i1 10.39553043 20.79106086 0 0 #NAME? 4.28E-07 4.34E-06 Down 3.419045 3.996339 3.117544 0 0 0 XP_008340777.1 "PREDICTED: multiple organellar RNA editing factor 3, mitochondrial [Malus domestica]" Q84JZ6|MORF3_ARATH "Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1" -- -- -- -- -- -- -- -- -- -- -- S ENOG410YC3W DAG protein Cellular Component: mitochondrion (GO:0005739);|Biological Process: mRNA processing (GO:0006397);|Biological Process: cytidine to uridine editing (GO:0016554);|Molecular Function: protein dimerization activity (GO:0046983);|Molecular Function: cobalt ion binding (GO:0050897);|Biological Process: mitochondrial mRNA modification (GO:0080156);|Biological Process: mitochondrial RNA modification (GO:1900864); -- -- TRINITY_DN8048_c0_g1_i1 6.407296618 12.81459324 0 0 #NAME? 0.000113704 0.000744571 Down 1.99051 1.069666 3.043345 8.00E-57 7.63E-64 7.66E-46 PIN12032.1 Serine/threonine protein kinase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- KOG3318 Predicted membrane protein [S] POORLY CHARACTERIZED Function unknown S ENOG41118KQ ER membrane protein complex subunit 4 -- -- -- TRINITY_DN8051_c0_g1_i1 4.862472067 9.724944135 0 0 #NAME? 0.02155824 0.071918366 Down 0.4625988 1.348968 3.94894 0 1.48E-82 3.50E-94 PIN17124.1 Acetylglucosaminyltransferase EXT1/exostosin 1 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8052_c0_g1_i1 8.345115322 15.95521228 0.735018369 0.046067602 -4.440103688 0.000248095 0.001509016 Down 2.653076 2.061798 2.428345 0.2495609 0 0 XP_020548154.1 uncharacterized protein LOC110011709 [Sesamum indicum] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN8053_c0_g1_i1 8.37958602 15.65664449 1.102527553 0.070419147 -3.827888434 0.00073121 0.003956589 Down 2.627189 1.690042 2.339133 0.4316015 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8055_c0_g1_i1 7.77744499 0 15.55488998 Inf Inf 5.56E-06 4.70E-05 Up 4.17E-33 0 0 1.986772 1.168739 1.115672 XP_024032903.1 uncharacterized protein LOC112095347 [Morus notabilis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8060_c0_g2_i1 7.862005547 14.62148354 1.102527553 0.07540463 -3.729203084 0.009098208 0.035232464 Down 1.262428 4.006404 1.366921 0.4606455 0 0 PON85873.1 Ribonuclease H [Trema orientale] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only -- -- -- Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN8077_c0_g1_i1 5.050139879 9.375809286 0.724470471 0.07727018 -3.693944431 0.013095268 0.047747362 Down 0.8017113 1.991982 1.866223 0 0.2209369 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN807_c0_g1_i1 9.157583144 16.43333078 1.881835511 0.114513335 -3.126412487 0.005088673 0.021501454 Down 0.7804668 3.403939 3.640917 1.21E-73 0.2281934 0.4226312 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8085_c0_g1_i1 3.475671451 6.951342902 0 0 #NAME? 0.009299558 0.035889715 Down 1.696965 0.8302855 1.337891 0 1.78E-33 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN80_c0_g1_i1 7.172658968 14.34531794 0 0 #NAME? 4.51E-05 0.000322355 Down 1.509756 2.121189 1.476316 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8101_c0_g1_i1 17.74209358 4.199706151 31.284481 7.44920713 2.897086878 1.54E-05 0.000120715 Up 0.566056 0.2364393 0.2469563 1.868595 2.255296 2.595558 PPR89037.1 hypothetical protein GOBAR_AA31657 [Gossypium barbadense] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41119RT NA -- -- -- TRINITY_DN8104_c0_g1_i1 23.29355837 46.58711674 0 0 #NAME? 3.18E-15 7.50E-14 Down 5.478798 7.007942 6.37553 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8107_c0_g1_i1 3.624955346 7.249910691 0 0 #NAME? 0.007505721 0.029949649 Down 1.321795 1.064282 1.170531 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8116_c0_g1_i1 3.145793203 0 6.291586406 Inf Inf 0.009418164 0.036264205 Up 1.85E-44 9.68E-57 1.65E-36 0.437419 1.367093 0.8414317 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8133_c0_g1_i1 14.30819213 25.23568496 3.380699309 0.133965031 -2.900071637 0.000222212 0.001365304 Down 5.400587 3.92453 2.562302 0.6517844 0 0.612735 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8155_c0_g1_i1 196.6657032 294.9777074 98.35369902 0.333427566 -1.584554711 1.56E-16 4.04E-15 Down 10.8043 11.62478 12.44339 2.986528 3.371619 3.035217 XP_011071981.1 cytochrome P450 71A8-like [Sesamum indicum] Q42716|C71A8_MENPI Cytochrome P450 71A8 OS=Mentha piperita OX=34256 GN=CYP71A8 PE=3 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN8162_c0_g1_i1 11.8740855 23.748171 0 0 #NAME? 4.70E-08 5.42E-07 Down 3.929133 5.843995 4.744503 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8164_c0_g1_i1 4.624174807 9.248349615 0 0 #NAME? 0.001742015 0.008526558 Down 0.8231245 2.917991 1.632987 0 0 0 XP_024626820.1 uncharacterized protein LOC112416714 [Medicago truncatula] Q94HW2|POLR1_ARATH Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN8171_c0_g1_i1 8.647898784 3.375816103 13.91998146 4.123441869 2.043849069 0.043431851 0.126713166 Up 0.213155 0.4108769 0.4809244 1.614065 1.924605 0.3465887 -- -- Q8L940|PDX13_ARATH Pyridoxal 5'-phosphate synthase subunit PDX1.3 OS=Arabidopsis thaliana OX=3702 GN=PDX13 PE=1 SV=2 csv:101213282 K06215 "pdxS, pdx1" pyridoxal 5'-phosphate synthase pdxS subunit ko00750 Vitamin B6 metabolism KOG1606 "Stationary phase-induced protein, SOR/SNZ family" [H] METABOLISM Coenzyme transport and metabolism -- -- -- Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: cellular amino acid metabolic process (GO:0006520);|Biological Process: response to oxidative stress (GO:0006979);|Biological Process: response to lipid hydroperoxide (GO:0006982);|Biological Process: pyridoxine biosynthetic process (GO:0008615);|Biological Process: response to salt stress (GO:0009651);|Biological Process: response to UV-B (GO:0010224);|Biological Process: response to non-ionic osmotic stress (GO:0010335);|Cellular Component: endomembrane system (GO:0012505);|Biological Process: chlorophyll metabolic process (GO:0015994);|Molecular Function: amine-lyase activity (GO:0016843);|Molecular Function: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity (GO:0036381);|Biological Process: hyperosmotic salinity response (GO:0042538);|Molecular Function: protein homodimerization activity (GO:0042803);|Biological Process: pyridoxal phosphate biosynthetic process (GO:0042823);|Molecular Function: protein heterodimerization activity (GO:0046982); -- -- TRINITY_DN8171_c0_g2_i1 18.17314275 10.2329435 26.11334199 2.55188959 1.351565911 0.02399028 0.078536765 Up 2.186284 1.187576 0.9100603 1.67661 3.183339 3.817004 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8173_c0_g1_i1 3.263218271 6.526436542 0 0 #NAME? 0.01123681 0.041919346 Down 0.5055839 1.463172 2.407238 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8177_c0_g1_i1 15.41743685 25.43383685 5.401036854 0.212356354 -2.23544082 0.00861668 0.033672432 Down 3.857716 3.235015 1.5673 0 0 1.528974 XP_025886510.1 uncharacterized protein LOC112941371 [Solanum lycopersicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111DYZ Viral movement protein (MP) -- -- -- TRINITY_DN8177_c0_g2_i1 29.04684705 43.88580135 14.20789275 0.323746914 -1.627061655 0.016561856 0.057892525 Down 8.935693 3.74353 4.715572 1.998319 0.6773545 1.887881 XP_025886510.1 uncharacterized protein LOC112941371 [Solanum lycopersicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111DYZ Viral movement protein (MP) -- PF01107.17 Viral movement protein (MP) TRINITY_DN8193_c0_g1_i1 6.068934578 11.40285079 0.735018369 0.064459176 -3.955470438 0.003903324 0.017114225 Down 1.323494 2.254929 2.246922 0.3021862 0 0 EYU22089.1 hypothetical protein MIMGU_mgv11b012645mg [Erythranthe guttata] A2RVS4|AIGLC_ARATH AIG2-like protein C OS=Arabidopsis thaliana OX=3702 GN=AIG2LC PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XV5J disease resistance protein Aig2 "Molecular Function: transferase activity, transferring acyl groups (GO:0016746);" -- -- TRINITY_DN8193_c0_g2_i1 3.208789025 6.41757805 0 0 #NAME? 0.042557965 0.124697871 Down 2.534415 1.246325 0 0 0 0 EYU22089.1 hypothetical protein MIMGU_mgv11b012645mg [Erythranthe guttata] A8MRP2|AIGLD_ARATH AIG2-like protein D OS=Arabidopsis thaliana OX=3702 GN=AIG2LD PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Molecular Function: transferase activity, transferring acyl groups (GO:0016746);" -- -- TRINITY_DN8196_c0_g1_i1 6.904576848 13.8091537 0 0 #NAME? 0.000257652 0.001561701 Down 0.6934951 3.351284 4.222321 0 0 0 -- -- Q6YW62|AB44G_ORYSJ ABC transporter G family member 44 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG44 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: transmembrane transport (GO:0055085);" -- -- TRINITY_DN8196_c0_g2_i1 11.42721466 22.85442931 0 0 #NAME? 1.15E-07 1.26E-06 Down 3.868733 5.364292 2.141097 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8203_c0_g1_i1 150.8663778 300.9977372 0.735018369 0.00244194 -8.677756622 6.44E-88 1.43E-85 Down 16.50863 14.97733 13.08033 0.08146586 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8204_c0_g1_i1 5.274851332 9.006549278 1.543153387 0.171336806 -2.545092995 0.042176896 0.123781978 Down 0.8243967 0.5350423 1.904475 0 0 0.4868338 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8206_c0_g1_i1 10.27676917 18.6245966 1.928941734 0.103569585 -3.271327708 0.000607849 0.003355067 Down 3.114345 3.124422 2.134205 0 0 0.7399357 CAN79884.1 hypothetical protein VITISV_002539 [Vitis vinifera] Q9ZT94|POLR2_ARATH Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN8211_c0_g1_i1 9.442242318 3.350331134 15.5341535 4.636602438 2.213068029 0.044640834 0.129431615 Up 0.8334596 0 0.958389 4.016544 1.448316 1.347895 XP_011081402.2 ethylene-responsive transcription factor 1A-like [Sesamum indicum] -- -- sind:105164449 K09286 EREBP EREBP-like factor -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8214_c0_g1_i1 5.783537558 11.56707512 0 0 #NAME? 0.003083249 0.013992996 Down 3.831112 2.20662 0.573935 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN821_c0_g1_i1 4.438204851 8.876409701 0 0 #NAME? 0.002425321 0.01136733 Down 1.492204 2.259499 1.156526 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8220_c0_g1_i1 15.21156496 26.42799443 3.995135488 0.151170589 -2.72575061 0.000271295 0.001635447 Down 1.921931 1.573582 1.767283 0.1424107 0.4935373 0 PIN18251.1 Ent-copalyl diphosphate synthase [Handroanthus impetiginosus] O04408|KSA_PEA "Ent-copalyl diphosphate synthase, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1" sind:105165295 K04120 E5.5.1.13 ent-copalyl diphosphate synthase ko00904 Diterpenoid biosynthesis -- -- -- -- -- I ENOG410XNXR diphosphate synthase Molecular Function: magnesium ion binding (GO:0000287);|Cellular Component: chloroplast (GO:0009507);|Biological Process: gibberellin biosynthetic process (GO:0009686);|Molecular Function: ent-copalyl diphosphate synthase activity (GO:0009905);|Molecular Function: terpene synthase activity (GO:0010333); PF03936.15 "Terpene synthase family, metal binding domain" TRINITY_DN8226_c0_g1_i1 2.459050504 4.918101007 0 0 #NAME? 0.037411013 0.112479328 Down 0.3668129 1.05895 1.733775 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8228_c0_g1_i1 18.66496488 11.10780349 26.22212627 2.36069411 1.239211115 0.028480129 0.090418135 Up 3.049272 2.981964 0.8158488 4.361828 5.583772 3.179254 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8244_c0_g1_i3 12.58127982 5.914657976 19.24790167 3.254271295 1.702334527 0.022154249 0.073598347 Up 1.264672 0.352911 0.6779502 2.272943 2.080873 1.498803 XP_015876204.1 secoisolariciresinol dehydrogenase-like [Ziziphus jujuba] H9BFQ0|TPRL1_ERYCB Tropinone reductase-like 1 OS=Erythroxylum coca OX=289672 PE=2 SV=1 -- -- -- -- -- -- KOG0725 Reductases with broad range of substrate specificities [R] POORLY CHARACTERIZED General function prediction only S COG1028 Dehydrogenase reductase Molecular Function: oxidoreductase activity (GO:0016491); -- -- TRINITY_DN8261_c0_g1_i1 7.738249691 0 15.47649938 Inf Inf 4.06E-05 0.000292398 Up 0 0 0 4.160382 2.371595 1.178816 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8265_c0_g1_i1 32.20586184 18.59403234 45.81769134 2.464107328 1.301065096 0.005887795 0.024378791 Up 1.898153 2.797493 3.666585 4.544273 5.730831 6.564331 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8266_c0_g1_i1 6.114313093 11.84283784 0.385788347 0.032575667 -4.940061452 0.00310353 0.014070969 Down 3.135893 0.7502774 1.583424 0 0 0.2124792 XP_021692914.1 uncharacterized protein LOC110673970 isoform X1 [Hevea brasiliensis] Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Cellular Component: nucleus (GO:0005634);|Biological Process: DNA recombination (GO:0006310);|Biological Process: DNA integration (GO:0015074);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN8294_c0_g1_i1 13.35131803 26.70263605 0 0 #NAME? 5.62E-09 7.32E-08 Down 3.671995 1.674228 2.896782 0 0 0 XP_012848349.1 PREDICTED: uncharacterized protein LOC105968265 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- -- -- TRINITY_DN8297_c0_g1_i1 17.52774872 2.765158638 32.29033879 11.67757189 3.545668422 1.09E-06 1.04E-05 Up 0.1116687 0.03595884 0.1955646 1.134305 1.096997 1.022432 XP_012834694.1 PREDICTED: premnaspirodiene oxygenase-like [Erythranthe guttata] A6YIH8|C7D55_HYOMU Premnaspirodiene oxygenase OS=Hyoscyamus muticus OX=35626 GN=CYP71D55 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN8300_c0_g1_i1 8.820306455 0 17.64061291 Inf Inf 1.16E-06 1.10E-05 Up 1.59E-37 6.78E-39 7.44E-83 1.001596 0.7271618 1.760624 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8307_c0_g1_i1 15.56164958 31.12329916 0 0 #NAME? 3.02E-10 4.55E-09 Down 3.856189 2.770732 1.937524 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8308_c0_g1_i1 9.826899598 16.74009547 2.913703731 0.174055383 -2.522381661 0.007118513 0.028648875 Down 2.983854 1.2903 1.867597 0.2764919 0.547686 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN831_c0_g1_i1 16.02802385 32.0560477 0 0 #NAME? 1.22E-10 1.92E-09 Down 4.611502 3.782094 3.971179 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8357_c0_g1_i1 10.82112829 21.28002134 0.362235236 0.017022315 -5.8764289 8.71E-05 0.000585288 Down 1.211621 4.041752 2.149797 0 0.1203707 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN835_c0_g1_i1 15.60839243 22.25069046 8.966094406 0.402958031 -1.31129851 0.046809627 0.134431822 Down 4.738351 2.544066 5.013794 1.163163 1.164373 1.734788 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8365_c0_g1_i1 8.260323254 15.78562814 0.735018369 0.046562504 -4.424687555 0.000345815 0.002036267 Down 1.26993 3.789405 1.992378 0.2548256 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8367_c0_g1_i1 7.699327349 13.58747852 1.811176178 0.133297446 -2.907278962 0.0080177 0.031661371 Down 1.04934 2.633916 1.756022 0 0.5401038 0 XP_012841353.1 PREDICTED: vacuolar amino acid transporter 1 [Erythranthe guttata] Q9LXF8|AVT1J_ARATH Amino acid transporter AVT1J OS=Arabidopsis thaliana OX=3702 GN=AVT1J PE=2 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Cellular Component: integral component of membrane (GO:0016021); PF01490.17 Transmembrane amino acid transporter protein TRINITY_DN8391_c0_g1_i1 9.622502854 16.23181558 3.013190124 0.185634818 -2.429460768 0.012348308 0.045379434 Down 4.668788 2.89682 1.376749 0.6947536 0 0.6943986 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8391_c0_g2_i1 16.72749268 24.44460137 9.010383996 0.368604252 -1.439855383 0.028004772 0.089170918 Down 2.469475 3.156156 2.100744 0.2017183 0.7965893 1.248372 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN839_c0_g1_i1 22.7764739 35.99351301 9.55943479 0.265587713 -1.912739693 0.001033404 0.005375809 Down 7.861887 6.752673 4.706405 0 3.104176 1.053722 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8416_c0_g1_i1 19.68072378 39.36144755 0 0 #NAME? 3.30E-06 2.91E-05 Down 2.737661 2.621795 6.777369 6.69E-56 9.89E-43 1.80E-36 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN843_c0_g1_i1 26.03768981 13.70297511 38.37240452 2.800297323 1.485580014 0.004364464 0.018875391 Up 1.995631 1.911652 2.520545 4.117943 6.879642 3.327986 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8446_c1_g1_i1 2.78100132 5.562002639 0 0 #NAME? 0.025945669 0.083716555 Down 1.215524 0.8667988 0.9450415 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8463_c0_g1_i1 13.20661548 22.16955914 4.243671814 0.191418863 -2.385195087 0.001619751 0.007997104 Down 4.163856 4.066978 5.641745 0 8.51E-33 2.120671 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8464_c0_g1_i1 12.17941099 19.03090179 5.327920205 0.279961521 -1.836699545 0.017155444 0.059554686 Down 2.543031 3.444833 3.150944 0.4956794 0 1.502704 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8468_c0_g1_i2 29.43793596 55.54509547 3.330776453 0.059965267 -4.059729095 1.10E-11 1.95E-10 Down 10.38646 8.207317 7.56281 0 0.8264303 0.4271337 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8474_c0_g1_i2 9.804931201 3.309765473 16.30009693 4.924849529 2.300079646 0.011702235 0.043398658 Up 0.1892697 0.2774272 0.4373353 1.186051 1.266304 1.004865 PIN07490.1 Loganate O-methyltransferase [Handroanthus impetiginosus] Q9FYC4|FAMT_ARATH Farnesoic acid carboxyl-O-methyltransferase OS=Arabidopsis thaliana OX=3702 GN=FAMT PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111PH9 methyltransferase Biological Process: response to molecule of fungal origin (GO:0002238);|Biological Process: response to wounding (GO:0009611);|Biological Process: response to salicylic acid (GO:0009751);|Biological Process: response to jasmonic acid (GO:0009753);|Molecular Function: farnesoic acid O-methyltransferase activity (GO:0019010);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: response to herbivore (GO:0080027); PF03492.14 SAM dependent carboxyl methyltransferase TRINITY_DN8478_c0_g1_i1 10.78931198 21.57862396 0 0 #NAME? 2.17E-07 2.29E-06 Down 1.435125 0.8900831 1.411778 0 0 0 RAL37078.1 hypothetical protein DM860_004000 [Cuscuta australis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8481_c0_g1_i1 24.81809746 13.69677472 35.93942021 2.623933076 1.391730924 0.010029694 0.038140061 Up 0.5794336 0.8197058 1.218282 2.511366 1.521688 1.438495 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8483_c0_g1_i1 22.2578678 32.68022705 11.83550855 0.362161148 -1.46529631 0.009865934 0.037649797 Down 3.076477 2.624502 2.578976 1.109176 0.725992 0.5368951 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN848_c0_g1_i1 4.810363616 9.620727231 0 0 #NAME? 0.001483015 0.007402518 Down 2.546708 2.405108 1.184592 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8491_c0_g1_i1 7.05736207 2.604892503 11.50983164 4.418543807 2.143570987 0.031709308 0.098621487 Up 1.633085 0 0 2.463573 1.665875 1.72492 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8495_c0_g1_i1 8.067045965 14.32291575 1.811176178 0.126453036 -2.983326423 0.012624482 0.04623714 Down 0.9163915 2.314436 0.8081399 0 0.4028708 0 XP_012832214.1 PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 2 homolog B [Erythranthe guttata] Q7Y1C5|BRC2A_ARATH Protein BREAST CANCER SUSCEPTIBILITY 2 homolog A OS=Arabidopsis thaliana OX=3702 GN=BRCA2A PE=1 SV=1 sind:105174738 K08775 "BRCA2, FANCD1" breast cancer 2 susceptibility protein ko03440 Homologous recombination KOG4751 DNA recombinational repair protein BRCA2 [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG410Y06W "Breast cancer 2, early onset" "Biological Process: telomere maintenance via recombination (GO:0000722);|Biological Process: double-strand break repair via homologous recombination (GO:0000724);|Cellular Component: nuclear chromosome, telomeric region (GO:0000784);|Cellular Component: lateral element (GO:0000800);|Molecular Function: protease binding (GO:0002020);|Molecular Function: single-stranded DNA binding (GO:0003697);|Cellular Component: nucleus (GO:0005634);|Cellular Component: nucleoplasm (GO:0005654);|Cellular Component: cytosol (GO:0005829);|Biological Process: nucleotide-excision repair (GO:0006289);|Molecular Function: protein C-terminus binding (GO:0008022);|Biological Process: meiotic DNA repair synthesis involved in reciprocal meiotic recombination (GO:0010778);|Cellular Component: secretory granule (GO:0030141);|Biological Process: homologous chromosome orientation involved in meiotic metaphase I plate congression (GO:0031619);|Biological Process: regulation of cytokinesis (GO:0032465);|Cellular Component: BRCA2-MAGE-D1 complex (GO:0033593);|Molecular Function: identical protein binding (GO:0042802);|Biological Process: histone H3 acetylation (GO:0043966);|Biological Process: histone H4 acetylation (GO:0043967);|Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);|Biological Process: positive regulation of mitotic cell cycle (GO:0045931);|Biological Process: meiotic recombination checkpoint (GO:0051598);|Biological Process: mitotic recombination-dependent replication fork processing (GO:1990426);" "PF09103.9,PF09169.9" "BRCA2, oligonucleotide/oligosaccharide-binding, domain 1|BRCA2, helical" TRINITY_DN8497_c0_g2_i1 15.2669528 6.73811032 23.79579528 3.531523551 1.820290717 0.019554945 0.066570993 Up 0.3106951 0.9057417 0.9562223 0.8996855 3.041929 2.570055 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8501_c0_g1_i1 13.20271046 20.91387894 5.49154197 0.262578835 -1.929177461 0.010972747 0.041072476 Down 3.235449 2.320456 3.426935 1.424707 0.475967 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8501_c0_g2_i1 10.63850624 19.34807075 1.928941734 0.099696851 -3.326308248 0.000461154 0.002627814 Down 2.870254 2.247356 1.208604 0 0 0.5230528 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8507_c0_g1_i1 44.11356592 23.80113744 64.42599439 2.706845189 1.436612379 0.000168707 0.001065847 Up 3.192899 2.505419 1.845398 5.148086 6.655025 4.743164 XP_012844424.1 PREDICTED: dirigent protein 1-like [Erythranthe guttata] Q67YM6|DIR11_ARATH Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YGJA Disease resistance response protein Cellular Component: apoplast (GO:0048046); PF03018.13 Dirigent-like protein TRINITY_DN850_c0_g1_i1 14.5839235 27.33030107 1.837545922 0.067234749 -3.894649143 0.000700919 0.003809026 Down 5.31801 8.683551 2.43927 0.8531155 0 0 PIN27010.1 hypothetical protein CDL12_00228 [Handroanthus impetiginosus] Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana OX=3702 GN=APRR1 PE=1 SV=1 tcc:TCM_014102 K12127 "TOC1, APRR1" pseudo-response regulator 1 ko04712 Circadian rhythm - plant KOG1601 GATA-4/5/6 transcription factors [K] INFORMATION STORAGE AND PROCESSING Transcription K COG5641 Transcription factor "Biological Process: phosphorelay signal transduction system (GO:0000160);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: DNA-binding transcription factor activity (GO:0003700);|Cellular Component: nucleus (GO:0005634);|Biological Process: transcription, DNA-templated (GO:0006351);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: circadian rhythm (GO:0007623);|Biological Process: flower development (GO:0009908);|Biological Process: circumnutation (GO:0010031);|Biological Process: regulation of gene expression (GO:0010468);|Biological Process: negative regulation of gene expression (GO:0010629);" -- -- TRINITY_DN8514_c0_g1_i1 6.359409463 12.71881893 0 0 #NAME? 0.000139672 0.0008988 Down 2.073789 2.013923 2.052586 0 0 0 CAN72257.1 hypothetical protein VITISV_034188 [Vitis vinifera] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8518_c0_g1_i1 20.87297158 41.74594317 0 0 #NAME? 1.05E-12 2.02E-11 Down 9.032393 4.746083 5.833606 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN851_c0_g1_i1 8.302524269 15.51834283 1.086705707 0.070027175 -3.835941305 0.000709788 0.003851692 Down 2.682925 2.134292 3.823216 0 0.5265462 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8523_c0_g1_i1 2.491515269 4.983030537 0 0 #NAME? 0.043159452 0.126115358 Down 1.787287 0.8830595 0.3516539 4.76E-91 3.60E-79 2.13E-93 ALT16902.1 geranylgeranyl diphosphate synthase 2 [Leucosceptrum canum] Q94ID7|GGPPS_HEVBR "Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1" sot:102589012 K13789 GGPS "geranylgeranyl diphosphate synthase, type II" ko00900 Terpenoid backbone biosynthesis KOG0776 Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [H] METABOLISM Coenzyme transport and metabolism H COG0142 synthase Molecular Function: dimethylallyltranstransferase activity (GO:0004161);|Molecular Function: farnesyltranstransferase activity (GO:0004311);|Molecular Function: geranyltranstransferase activity (GO:0004337);|Cellular Component: chloroplast (GO:0009507);|Biological Process: carotenoid biosynthetic process (GO:0016117);|Biological Process: geranyl diphosphate biosynthetic process (GO:0033384);|Biological Process: geranylgeranyl diphosphate biosynthetic process (GO:0033386);|Biological Process: farnesyl diphosphate biosynthetic process (GO:0045337);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN8530_c0_g1_i1 9.383412597 15.40440505 3.362420146 0.218276534 -2.195771053 0.016258412 0.057077967 Down 1.597964 1.420506 2.01165 0.5537001 0 0.2816407 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8536_c0_g1_i1 13.83776438 27.31329352 0.362235236 0.013262232 -6.236532591 3.26E-08 3.86E-07 Down 1.750612 0.9453333 1.419804 0 0.05522899 0 KZV56298.1 hypothetical protein F511_00295 [Dorcoceras hygrometricum] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YCUF Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); "PF00665.25,PF13976.5" Integrase core domain|GAG-pre-integrase domain TRINITY_DN8536_c0_g2_i1 11.87310466 23.74620931 0 0 #NAME? 3.69E-08 4.32E-07 Down 0.872712 0.8758866 1.614442 0 0 0 KYP63308.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only ADL COG5049 5'-3' exoribonuclease Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); "PF13976.5,PF00665.25" GAG-pre-integrase domain|Integrase core domain TRINITY_DN8537_c0_g1_i1 315.6318488 131.6257724 499.6379252 3.795897385 1.924440992 3.02E-34 1.98E-32 Up 23.09303 20.85409 26.62322 75.30797 69.69353 71.44657 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8541_c0_g1_i1 15.78743274 30.11010269 1.464762789 0.048646888 -4.361508678 7.24E-07 7.10E-06 Down 2.866002 5.371975 2.758643 0.3490589 0.07225101 1.21E-07 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8547_c0_g1_i1 12.85832109 22.42488136 3.291760813 0.146790556 -2.768168938 0.000733058 0.003964227 Down 3.600686 5.850573 4.145035 1.138164 0.5715094 0 XP_011075991.1 phosphatidylinositol 4-kinase gamma 3 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410XP06 Phosphatidylinositol 4-kinase type -- -- -- TRINITY_DN8556_c0_g1_i1 4.20516208 7.680579741 0.72974442 0.095011633 -3.395752033 0.038152746 0.114231752 Down 1.095181 1.724868 1.003904 0.2042721 0.2011268 0 XP_011088306.1 kinesin-like protein KIN-12D [Sesamum indicum] Q27IK6|KN12D_ARATH Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 sind:105169579 K10400 KIF15 kinesin family member 15 -- -- KOG4280 Kinesin-like protein [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5059 Kinesin family member Biological Process: mitotic cytokinesis (GO:0000281);|Biological Process: cytokinesis by cell plate formation (GO:0000911);|Molecular Function: microtubule motor activity (GO:0003777);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: kinesin complex (GO:0005871);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based movement (GO:0007018);|Molecular Function: microtubule binding (GO:0008017);|Cellular Component: phragmoplast (GO:0009524);|Molecular Function: ATPase activity (GO:0016887); -- -- TRINITY_DN8566_c0_g1_i1 17.80902631 35.61805261 0 0 #NAME? 9.51E-12 1.69E-10 Down 2.488466 1.849039 1.98786 0 0 0 AEK66126.1 cytochrome b (mitochondrion) [Cloning vector pRS316-1B9] Q3T4F1|CYB_RHIOR Cytochrome b OS=Rhizopus oryzae OX=64495 GN=cob PE=3 SV=1 ccp:ChcroMp07 K00412 "CYTB, petB" ubiquinol-cytochrome c reductase cytochrome b subunit ko00190 Oxidative phosphorylation KOG4663 Cytochrome b [C] METABOLISM Energy production and conversion C COG1290 "Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (By similarity)" "Cellular Component: mitochondrial inner membrane (GO:0005743);|Biological Process: mitochondrial electron transport, ubiquinol to cytochrome c (GO:0006122);|Molecular Function: ubiquinol-cytochrome-c reductase activity (GO:0008121);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: respiratory chain complex III (GO:0045275);|Molecular Function: metal ion binding (GO:0046872);" -- -- TRINITY_DN856_c0_g1_i1 15.01470856 25.93479524 4.094621882 0.157881404 -2.663086842 0.000397665 0.002304213 Down 1.831643 1.128275 0.9736269 0.1157767 0.1903099 0.2110107 XP_021628388.1 uncharacterized protein LOC110626658 [Manihot esculenta] Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=3 SV=2 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein "Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: DNA binding (GO:0003677);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: ribonuclease activity (GO:0004540);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: DNA recombination (GO:0006310);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074);|Biological Process: transposition, RNA-mediated (GO:0032197);" "PF00078.26,PF08284.10,PF13975.5,PF13650.5" Reverse transcriptase (RNA-dependent DNA polymerase)|Retroviral aspartyl protease|gag-polyprotein putative aspartyl protease|Aspartyl protease TRINITY_DN8571_c0_g1_i1 10.29336953 18.34266831 2.244070747 0.122341565 -3.031013459 0.018604855 0.06383448 Down 4.9287 1.033074 2.471705 2.02E-09 0.3477786 0.3750231 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8572_c0_g1_i2 12.05815495 24.1163099 0 0 #NAME? 1.16E-07 1.27E-06 Down 4.267638 5.958677 2.245805 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8573_c0_g1_i1 4.378466519 0 8.756933038 Inf Inf 0.007207926 0.028954811 Up 0 0 0 2.014991 2.044403 0 XP_020551785.1 pentatricopeptide repeat-containing protein At4g04370 [Sesamum indicum] Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E99 PE=3 SV=1 -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN857_c0_g1_i1 4.049580465 7.374690458 0.724470471 0.098237407 -3.347583703 0.049164887 0.139789646 Down 1.691491 1.370224 0.4302912 0 0.2457266 0 PIN08601.1 hypothetical protein CDL12_18819 [Handroanthus impetiginosus] Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana OX=3702 GN=ATL43 PE=2 SV=2 -- -- -- -- -- -- KOG0800 FOG: Predicted E3 ubiquitin ligase [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O ENOG41121N2 zinc ion binding Cellular Component: integral component of membrane (GO:0016021);|Biological Process: protein ubiquitination (GO:0016567);|Molecular Function: transferase activity (GO:0016740);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN8582_c0_g1_i2 30.65698607 61.31397214 0 0 #NAME? 0.000527792 0.002961443 Down 9.269792 7.718995 0 0 0 0 NP_001238695.1 putative plastocyanin [Glycine max] P00299|PLAS1_POPNI "Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2" gmx:100499708 K02638 petE plastocyanin ko00195 Photosynthesis -- -- -- -- -- C COG3794 Blue (Type 1) copper domain protein Molecular Function: copper ion binding (GO:0005507);|Molecular Function: electron transfer activity (GO:0009055);|Cellular Component: chloroplast thylakoid membrane (GO:0009535); "PF00127.19,PF13473.5" "Copper binding proteins, plastocyanin/azurin family|Cupredoxin-like domain" TRINITY_DN8585_c0_g1_i1 17.91630925 28.73008043 7.102538057 0.247216087 -2.01615547 0.002184717 0.010381124 Down 3.18006 2.908436 1.722209 0.5167841 0.3631352 0.6842343 XP_011078445.1 transcription repressor OFP8 [Sesamum indicum] Q3E9B4|OFP8_ARATH Transcription repressor OFP8 OS=Arabidopsis thaliana OX=3702 GN=OFP8 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YX1Q Pfam:DUF623 "Cellular Component: nucleus (GO:0005634);|Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);" PF04844.12 "Transcriptional repressor, ovate" TRINITY_DN858_c0_g1_i1 6.880816824 0 13.76163365 Inf Inf 2.40E-05 0.000181009 Up 0 0 0 1.507507 2.183219 2.260682 OBA28809.1 hypothetical protein HANVADRAFT_57857 [Hanseniaspora valbyensis NRRL Y-1626] O94238|RL14_SCHPO 60S ribosomal protein L14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl14 PE=2 SV=1 tbl:TBLA_0I00230 K02875 "RP-L14e, RPL14" large subunit ribosomal protein L14e ko03010 Ribosome KOG3421 60S ribosomal protein L14 [J] INFORMATION STORAGE AND PROCESSING "Translation, ribosomal structure and biogenesis " J COG2163 (ribosomal) protein Biological Process: cytoplasmic translation (GO:0002181);|Molecular Function: RNA binding (GO:0003723);|Molecular Function: structural constituent of ribosome (GO:0003735);|Cellular Component: nucleus (GO:0005634);|Cellular Component: cytosol (GO:0005829);|Cellular Component: cytosolic large ribosomal subunit (GO:0022625);|Biological Process: ribosomal large subunit biogenesis (GO:0042273); PF01929.16 Ribosomal protein L14 TRINITY_DN8595_c0_g1_i1 17.42734387 24.87218764 9.982500096 0.401351913 -1.31706032 0.041223365 0.121588838 Down 4.695782 3.858891 3.668953 2.347526 0.7947876 0.7959242 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8597_c0_g1_i1 3.926623331 7.853246662 0 0 #NAME? 0.005314212 0.02232146 Down 1.635839 1.588813 0.7506233 0 0 0 AMK48045.1 hypothetical protein [Lupinus angustifolius] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Y65V Retrotransposon protein -- PF13456.5 Reverse transcriptase-like TRINITY_DN8597_c0_g2_i1 5.361731394 10.72346279 0 0 #NAME? 0.000654171 0.003582865 Down 1.863704 2.466129 1.257467 0 0 0 XP_024019488.1 uncharacterized protein LOC112091032 [Morus notabilis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8598_c0_g1_i1 1979.039389 3958.078777 0 0 #NAME? 0 0 Down 224.8368 236.0735 224.6968 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8600_c0_g1_i1 6.782336727 13.56467345 0 0 #NAME? 6.38E-05 0.000441136 Down 1.201717 1.473911 2.744981 0 0 0 XP_022856859.1 uncharacterized protein LOC111377935 [Olea europaea var. sylvestris] P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN8613_c0_g1_i1 5.705172621 0 11.41034524 Inf Inf 0.000149934 0.000958747 Up 0 0 0 1.474072 1.671592 0.636583 KZP23352.1 hypothetical protein FIBSPDRAFT_1043047 [Fibularhizoctonia sp. CBS 109695] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZDQY NA -- "PF00036.31,PF13202.5,PF13833.5" EF hand|EF hand|EF-hand domain pair TRINITY_DN8626_c0_g1_i1 916.0695769 527.1511941 1304.98796 2.475547764 1.307747785 6.37E-40 5.08E-38 Up 54.5696 49.72516 49.95003 104.373 105.5218 98.03507 PIN15845.1 hypothetical protein CDL12_11511 [Handroanthus impetiginosus] Q8VY88|LTD_ARATH Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana OX=3702 GN=LTD PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG4111Q7E Involved in the import of light-harvesting complex proteins (LHCP) and subsequent routing of these proteins to the chloroplast signal recognition particle (SRP) pathway Biological Process: intracellular protein transport (GO:0006886);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Cellular Component: chloroplast stroma (GO:0009570);|Cellular Component: chloroplast envelope (GO:0009941);|Biological Process: response to karrikin (GO:0080167);|Biological Process: granum assembly (GO:0090391); -- -- TRINITY_DN8650_c0_g1_i1 11.51641205 23.0328241 0 0 #NAME? 0.04632771 0.133317723 Down 0.5842641 10.19202 1.37928 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8656_c0_g1_i1 6.938327278 12.78994885 1.086705707 0.084965602 -3.556977296 0.02920814 0.092207046 Down 4.127381 2.015414 0.5999843 0 0.5033854 0 PSR98448.1 Myb-like protein [Actinidia chinensis var. chinensis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8659_c0_g1_i2 35.499629 4.471230166 66.52802784 14.87913289 3.895218548 1.90E-05 0.000146225 Up 0.4083936 0.7919605 0.3180073 3.755576 9.535197 5.271 -- -- Q43434|VATL_GOSHI V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum OX=3635 GN=CVA16-2 PE=2 SV=1 -- -- -- -- -- -- KOG0232 "Vacuolar H+-ATPase V0 sector, subunits c/c'" [C] METABOLISM Energy production and conversion -- -- -- "Cellular Component: vacuolar membrane (GO:0005774);|Molecular Function: proton transmembrane transporter activity (GO:0015078);|Biological Process: ATP hydrolysis coupled proton transport (GO:0015991);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: proton-transporting V-type ATPase, V0 domain (GO:0033179);" -- -- TRINITY_DN8663_c0_g1_i1 16.44498003 7.623409409 25.26655065 3.314337365 1.728720461 0.00991983 0.037807794 Up 1.379353 0.6771289 1.653166 4.560016 2.386666 3.064628 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8675_c0_g1_i1 14.97853716 5.848607346 24.10846698 4.122086773 2.043374875 0.003350754 0.015020815 Up 0.8304369 0.1623452 0.5085028 0.9261054 2.214607 1.670418 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8679_c0_g1_i1 17.09795294 34.19590588 0 0 #NAME? 2.91E-11 4.92E-10 Down 3.809785 2.271092 2.398941 0 0 0 XP_012839839.1 PREDICTED: putative nuclease HARBI1 [Erythranthe guttata] -- -- -- -- -- -- -- -- KOG4585 Predicted transposase [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG411206Y transposon protein -- -- -- TRINITY_DN8687_c0_g1_i1 7.971265486 15.94253097 0 0 #NAME? 0.005062435 0.02140653 Down 3.767403 3.616348 0 0 0 0 KHN05287.1 "Photosystem I reaction center subunit psaK, chloroplastic [Glycine soja]" Q9ZT05|PSAK_MEDSA "Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa OX=3879 GN=PSAK PE=2 SV=1" gmx:100527056 K02698 psaK photosystem I subunit X ko00195 Photosynthesis -- -- -- -- -- S ENOG4111RY5 Photosystem I reaction center subunit Cellular Component: photosystem I (GO:0009522);|Cellular Component: chloroplast thylakoid membrane (GO:0009535);|Biological Process: photosynthesis (GO:0015979);|Cellular Component: integral component of membrane (GO:0016021); PF01241.17 Photosystem I psaG / psaK TRINITY_DN8706_c0_g1_i1 63.66608916 92.9443614 34.38781693 0.36998282 -1.434469814 0.000212146 0.001311447 Down 7.396769 13.51498 10.57833 2.99397 3.94711 2.421299 PIM98593.1 hypothetical protein CDL12_28926 [Handroanthus impetiginosus] P93224|NLTP2_SOLLC Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum OX=4081 GN=LE16 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- U ENOG410YWBC Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity) Biological Process: lipid transport (GO:0006869);|Molecular Function: lipid binding (GO:0008289); "PF14368.5,PF00234.21" Probable lipid transfer|Protease inhibitor/seed storage/LTP family TRINITY_DN8712_c0_g1_i1 22.38457988 1.587492154 43.18166761 27.2011849 4.765597593 6.02E-11 9.81E-10 Up 0.3356657 0.3339496 0 6.046581 5.554748 3.000237 GAU21183.1 hypothetical protein TSUD_11000 [Trifolium subterraneum] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN8726_c0_g1_i1 5.244132862 10.48826572 0 0 #NAME? 0.011820684 0.043766421 Down 2.080706 2.797673 0 0 0 0 KRH15406.1 hypothetical protein GLYMA_14G085800 [Glycine max] P43297|RD21A_ARATH Cysteine proteinase RD21A OS=Arabidopsis thaliana OX=3702 GN=RD21A PE=1 SV=1 -- -- -- -- -- -- KOG1543 Cysteine proteinase Cathepsin L [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG4870 cathepsin Cellular Component: P-body (GO:0000932);|Molecular Function: cysteine-type endopeptidase activity (GO:0004197);|Cellular Component: extracellular space (GO:0005615);|Cellular Component: lysosome (GO:0005764);|Cellular Component: vacuole (GO:0005773);|Cellular Component: Golgi apparatus (GO:0005794);|Biological Process: proteolysis (GO:0006508);|Molecular Function: peptidase activity (GO:0008233);|Molecular Function: cysteine-type peptidase activity (GO:0008234);|Cellular Component: plasmodesma (GO:0009506);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: cytoplasmic stress granule (GO:0010494);|Cellular Component: apoplast (GO:0048046);|Biological Process: defense response to fungus (GO:0050832);|Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603); PF00112.22 Papain family cysteine protease TRINITY_DN8734_c0_g1_i1 16.35556018 25.71579996 6.995320399 0.272024219 -1.878192991 0.006711454 0.027257137 Down 5.66673 3.057394 2.727662 1.007853 0.98274 0.3611283 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8736_c0_g1_i1 11.58057959 23.16115918 0 0 #NAME? 0.004543881 0.019541488 Down 3.165514 4.91317 1.33E-60 0 0 2.96E-51 ACU14018.1 unknown [Glycine max] P49107|PSAN_ARATH "Photosystem I reaction center subunit N, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAN PE=1 SV=2" gmx:100306036 K02701 psaN photosystem I subunit PsaN ko00195 Photosynthesis -- -- -- -- -- S ENOG411281Y Photosystem I reaction center subunit Biological Process: photosynthesis (GO:0015979);|Molecular Function: protein domain specific binding (GO:0019904);|Cellular Component: chloroplast photosystem I (GO:0030093); PF05479.10 Photosystem I reaction centre subunit N (PSAN or PSI-N) TRINITY_DN8742_c0_g1_i2 57.67437748 22.6771208 92.67163416 4.086569674 2.030890332 5.56E-09 7.25E-08 Up 3.087659 4.011621 2.571238 11.0409 11.43473 9.504155 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8744_c0_g1_i1 5.857556203 10.6284067 1.086705707 0.102245401 -3.289892141 0.010841416 0.040678163 Down 1.586386 1.048281 3.73934 0 0.5685789 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8750_c0_g1_i1 6.766398146 12.0680335 1.464762789 0.121375433 -3.042451656 0.035882641 0.108948249 Down 3.301825 0.8264612 1.139614 0.3478114 0.1764483 6.02E-81 PIN26406.1 hypothetical protein CDL12_00841 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4110836 cysteine histidine-rich C1 -- PF03107.15 C1 domain TRINITY_DN8756_c1_g1_i1 8.727309216 15.26538517 2.18923326 0.143411597 -2.801766407 0.023042124 0.075991801 Down 2.239042 4.307077 1.006363 0.4933187 0.479847 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8758_c0_g1_i2 5.752412745 11.50482549 0 0 #NAME? 0.000306055 0.001823434 Down 1.462912 0.8154825 2.027072 0 0 0 -- -- Q9FVR6|Y1222_ARATH "Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g32220 PE=1 SV=1" -- -- -- -- -- -- KOG4288 Predicted oxidoreductase [R] POORLY CHARACTERIZED General function prediction only -- -- -- Molecular Function: NADH dehydrogenase activity (GO:0003954);|Cellular Component: mitochondrial respiratory chain complex I (GO:0005747);|Biological Process: response to oxidative stress (GO:0006979);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: thylakoid (GO:0009579);|Cellular Component: plastoglobule (GO:0010287);|Biological Process: ubiquinone-6 biosynthetic process (GO:1901006); -- -- TRINITY_DN8762_c0_g1_i1 11.54902694 0 23.09805387 Inf Inf 1.40E-08 1.73E-07 Up 5.90E-52 1.76E-76 7.54E-72 1.475984 1.089415 1.555723 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8762_c0_g2_i1 12.4984837 24.9969674 0 0 #NAME? 2.31E-08 2.79E-07 Down 4.320443 3.521099 2.49356 7.67E-72 4.77E-50 4.90E-67 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8766_c0_g1_i1 9.561652081 14.9632969 4.160007267 0.278014083 -1.846770129 0.036362213 0.110024659 Down 1.566938 3.87963 2.910817 0.2582183 0.2607209 1.211217 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8767_c0_g1_i2 7.465420174 13.40596612 1.524874224 0.11374594 -3.136113038 0.004794411 0.020465741 Down 1.820052 0.4384286 1.72415 0.1031655 0 0.2523836 XP_011082995.1 phospholipase A1-IIdelta [Sesamum indicum] Q9SJI7|PLA20_ARATH Phospholipase A1-IIdelta OS=Arabidopsis thaliana OX=3702 GN=At2g42690 PE=1 SV=1 -- -- -- -- -- -- KOG4569 Predicted lipase [I] METABOLISM Lipid transport and metabolism -- -- -- Cellular Component: cytoplasm (GO:0005737);|Molecular Function: phospholipase A1 activity (GO:0008970);|Cellular Component: chloroplast (GO:0009507);|Biological Process: UV protection (GO:0009650);|Biological Process: lipid catabolic process (GO:0016042);|Biological Process: cellular response to UV-B (GO:0071493); -- -- TRINITY_DN8772_c0_g1_i1 16.56369952 7.224425722 25.90297332 3.58547161 1.842162894 0.012539865 0.045968028 Up 1.586967 0.3714875 1.180113 2.06473 2.421138 5.002306 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8775_c0_g1_i2 22.17295282 39.88377457 4.462131066 0.111878354 -3.159997156 9.98E-07 9.59E-06 Down 4.136481 6.995147 3.757091 0.4780379 0.4722508 0.4970265 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8778_c0_g1_i1 8.446468168 14.63304374 2.259892593 0.15443763 -2.694903776 0.006793378 0.027540573 Down 1.622322 3.124108 3.71102 0.5507816 0 0.562327 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8780_c0_g1_i1 22.1980159 33.60293937 10.79309243 0.32119489 -1.638479152 0.04340838 0.126682907 Down 1.058071 3.051706 1.341958 0.4672306 0.412268 0.4936869 EYU36335.1 hypothetical protein MIMGU_mgv1a004314mg [Erythranthe guttata] S4UX02|CYPH1_SALMI Ferruginol synthase OS=Salvia miltiorrhiza OX=226208 GN=CYP76AH1 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);" PF00067.21 Cytochrome P450 TRINITY_DN8787_c0_g1_i1 30.86929948 61.73859895 0 0 #NAME? 7.22E-20 2.34E-18 Down 5.912876 4.880007 4.73474 0 0 0 AEK66120.1 cytochrome c oxidase subunit III (mitochondrion) [Cloning vector pRS316-1B9] P26858|COX3_MARPO Cytochrome c oxidase subunit 3 OS=Marchantia polymorpha OX=3197 GN=COX3 PE=3 SV=2 csl:CospCoM_p10 K02262 COX3 cytochrome c oxidase subunit 3 ko00190 Oxidative phosphorylation KOG4664 Cytochrome oxidase subunit III and related proteins [C] METABOLISM Energy production and conversion C COG1845 "Cytochrome C Oxidase, Subunit III" Molecular Function: cytochrome-c oxidase activity (GO:0004129);|Cellular Component: mitochondrial inner membrane (GO:0005743);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: aerobic electron transport chain (GO:0019646); -- -- TRINITY_DN8795_c0_g1_i1 10.86396126 4.633055105 17.09486742 3.689761298 1.883527487 0.032820402 0.101493058 Up 0.7884407 0.3864643 1.496145 1.049418 3.805568 3.01972 XP_019461634.1 PREDICTED: polcalcin Che a 3-like [Lupinus angustifolius] O81701|POLC4_ALNGL Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1 adu:107457873 K13448 CML calcium-binding protein CML ko04626 Plant-pathogen interaction KOG0027 Calmodulin and related proteins (EF-Hand superfamily) [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms DTZ COG5126 Calcium-binding protein Molecular Function: calcium ion binding (GO:0005509); -- -- TRINITY_DN87_c0_g1_i1 80.73445135 160.7444322 0.724470471 0.004506971 -7.793626164 2.40E-47 2.43E-45 Down 12.58286 10.30025 12.66923 0 0.1024977 0 AIC48341.1 "B2M, partial [synthetic construct]" -- -- -- -- -- -- -- -- -- -- -- -- -- O ENOG410YTDG Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity) -- PF07654.14 Immunoglobulin C1-set domain TRINITY_DN8802_c0_g1_i2 16.85613519 33.71227039 0 0 #NAME? 3.31E-11 5.56E-10 Down 7.225622 5.618713 7.322528 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8810_c0_g1_i1 20.17325608 29.19891576 11.1475964 0.381781176 -1.389182123 0.017200214 0.059696408 Down 1.737273 2.140582 2.342424 0.8235782 0.4797283 0.5736383 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4112DDP Cuticular protein -- PF00379.22 Insect cuticle protein TRINITY_DN8810_c0_g2_i1 29.68403281 0 59.36806562 Inf Inf 3.95E-21 1.41E-19 Up 8.31E-31 1.36E-29 1.67E-46 3.670138 3.031698 2.887542 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF00379.22 Insect cuticle protein TRINITY_DN8817_c0_g1_i1 17.26417767 10.08576155 24.44259379 2.423475279 1.277077366 0.038038421 0.113922622 Up 1.696134 2.228941 1.313772 4.573541 3.057439 2.678388 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN881_c0_g1_i1 3.576050798 0 7.152101596 Inf Inf 0.004981636 0.021131801 Up 0 0 0 0.3055588 0.9061184 1.856983 PIN22644.1 hypothetical protein CDL12_04628 [Handroanthus impetiginosus] Q6XQ14|C71E7_MANES 2-methylbutanal oxime monooxygenase OS=Manihot esculenta OX=3983 GN=CYP71E7 PE=1 SV=1 -- -- -- -- -- -- KOG0156 Cytochrome P450 CYP2 subfamily [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2124 Cytochrome p450 "Molecular Function: monooxygenase activity (GO:0004497);|Molecular Function: iron ion binding (GO:0005506);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);|Molecular Function: heme binding (GO:0020037);|Cellular Component: organelle membrane (GO:0031090);" PF00067.21 Cytochrome P450 TRINITY_DN8828_c0_g1_i1 14.17553236 28.35106472 0 0 #NAME? 3.75E-06 3.27E-05 Down 1.545768 5.661185 3.997367 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8833_c1_g1_i1 4.660519171 9.321038342 0 0 #NAME? 0.036626451 0.11062509 Down 3.937101 1.648241 0 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8834_c0_g1_i1 6.13221955 11.49286241 0.771576693 0.067135294 -3.896784784 0.010855543 0.040721068 Down 2.575964 0.2750611 2.730663 0 0 0.3357283 XP_020554063.1 F-box protein CPR30-like [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8837_c0_g1_i1 39.57906936 25.5006057 53.65753302 2.104167001 1.073249211 0.046942327 0.134727683 Up 3.794989 1.878037 3.675356 7.72811 4.36685 3.730125 KZV54883.1 hypothetical protein F511_35958 [Dorcoceras hygrometricum] Q9LUV2|POP3_ARATH Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana OX=3702 GN=HS1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111U5X stress responsive alpha-beta barrel domain-containing protein Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: pollen tube adhesion (GO:0009865);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: defense response to fungus (GO:0050832); -- -- TRINITY_DN8837_c0_g2_i1 23.80787307 14.23870165 33.3770445 2.344107302 1.229038611 0.02066339 0.069608683 Up 1.16804 2.436768 1.630582 3.476753 3.649077 3.153311 KZV54883.1 hypothetical protein F511_35958 [Dorcoceras hygrometricum] Q9LUV2|POP3_ARATH Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana OX=3702 GN=HS1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111U5X stress responsive alpha-beta barrel domain-containing protein Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: pollen tube adhesion (GO:0009865);|Biological Process: defense response to bacterium (GO:0042742);|Molecular Function: metal ion binding (GO:0046872);|Biological Process: defense response to fungus (GO:0050832); PF07876.11 Stress responsive A/B Barrel Domain TRINITY_DN8839_c0_g1_i1 4.653758227 9.307516455 0 0 #NAME? 0.027914204 0.088938686 Down 2.360254 1.142305 0 0 0 0 KRH69622.1 hypothetical protein GLYMA_02G038100 [Glycine max] Q9LR30|GGT1_ARATH Glutamate--glyoxylate aminotransferase 1 OS=Arabidopsis thaliana OX=3702 GN=GGAT1 PE=1 SV=1 gmx:100127415 K14272 GGAT glutamate--glyoxylate aminotransferase ko00260|ko00710|ko00630|ko00250|ko00220 "Glycine, serine and threonine metabolism|Carbon fixation in photosynthetic organisms|Glyoxylate and dicarboxylate metabolism|Alanine, aspartate and glutamate metabolism|Arginine biosynthesis" KOG0258 Alanine aminotransferase [E] METABOLISM Amino acid transport and metabolism E COG0436 aminotransferase Biological Process: response to hypoxia (GO:0001666);|Molecular Function: L-alanine:2-oxoglutarate aminotransferase activity (GO:0004021);|Cellular Component: vacuole (GO:0005773);|Cellular Component: peroxisome (GO:0005777);|Biological Process: glycine biosynthetic process (GO:0006545);|Molecular Function: alanine-glyoxylate transaminase activity (GO:0008453);|Cellular Component: chloroplast (GO:0009507);|Biological Process: photorespiration (GO:0009853);|Cellular Component: membrane (GO:0016020);|Molecular Function: pyridoxal phosphate binding (GO:0030170);|Biological Process: L-alanine catabolic process (GO:0042853);|Molecular Function: glycine:2-oxoglutarate aminotransferase activity (GO:0047958);|Cellular Component: apoplast (GO:0048046); -- -- TRINITY_DN8839_c0_g2_i1 11.90619115 23.81238231 0 0 #NAME? 0.00375571 0.016579104 Down 2.167205 3.215282 0 0 0 0 NP_001237567.2 alanine aminotransferase 2 [Glycine max] Q9S7E9|GGT2_ARATH Glutamate--glyoxylate aminotransferase 2 OS=Arabidopsis thaliana OX=3702 GN=GGAT2 PE=1 SV=1 gmx:100127414 K14272 GGAT glutamate--glyoxylate aminotransferase ko00260|ko00710|ko00630|ko00250|ko00220 "Glycine, serine and threonine metabolism|Carbon fixation in photosynthetic organisms|Glyoxylate and dicarboxylate metabolism|Alanine, aspartate and glutamate metabolism|Arginine biosynthesis" KOG0258 Alanine aminotransferase [E] METABOLISM Amino acid transport and metabolism E COG0436 aminotransferase Molecular Function: L-alanine:2-oxoglutarate aminotransferase activity (GO:0004021);|Cellular Component: peroxisome (GO:0005777);|Molecular Function: alanine-glyoxylate transaminase activity (GO:0008453);|Biological Process: biosynthetic process (GO:0009058);|Cellular Component: chloroplast (GO:0009507);|Cellular Component: chloroplast stroma (GO:0009570);|Molecular Function: pyridoxal phosphate binding (GO:0030170);|Biological Process: L-alanine catabolic process (GO:0042853);|Molecular Function: glycine:2-oxoglutarate aminotransferase activity (GO:0047958); PF00155.20 Aminotransferase class I and II TRINITY_DN8847_c0_g1_i1 14.68397584 22.54925825 6.81869342 0.30239103 -1.725512752 0.012325624 0.045321647 Down 3.515939 2.267638 3.883839 0.4188716 0.4084725 1.613107 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8865_c0_g1_i1 22.7178255 10.50490522 34.93074579 3.325184288 1.7334343 0.000902244 0.004762828 Up 2.866274 0.6905164 0.1852378 3.483113 3.216165 3.313701 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8878_c0_g1_i1 9.456154643 16.70725418 2.205055106 0.131981897 -2.921588032 0.016267532 0.05710115 Down 3.005781 5.988727 1.561295 1.198027 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8880_c0_g1_i2 9.069359453 18.13871891 0 0 #NAME? 3.43E-06 3.02E-05 Down 3.7816 2.968228 1.601105 0 0 0.03519591 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8908_c0_g1_i1 7.498051679 14.99610336 0 0 #NAME? 0.001006518 0.005253404 Down 0.6059545 4.624595 3.261143 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8916_c0_g1_i1 19.75276246 32.81232831 6.693196599 0.203984202 -2.293470672 0.000268722 0.00162187 Down 1.447239 1.35013 1.190334 0.218579 0.2147815 0.2173907 PNX92269.1 cysteine-rich receptor-like protein kinase [Trifolium pratense] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- PF14529.5 Endonuclease-reverse transcriptase TRINITY_DN8936_c0_g1_i1 17.17512633 8.437981454 25.91227121 3.070908765 1.618665651 0.013145029 0.047888628 Up 4.09E-53 3.14447 2.143569 4.645275 5.010822 3.699573 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8941_c0_g1_i1 6.273346971 11.3893289 1.15736504 0.10161837 -3.298766865 0.007891851 0.031243224 Down 1.158972 2.217034 2.116418 0 1.13E-79 0.3920252 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8954_c0_g1_i3 19.00441509 36.09816762 1.910662571 0.052929628 -4.239780685 2.11E-08 2.56E-07 Down 2.941639 1.726278 2.300789 0.07668543 9.25E-67 0.2444013 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8962_c0_g1_i1 15.46989513 30.93979026 0 0 #NAME? 2.76E-10 4.19E-09 Down 3.628687 2.749287 2.91697 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8965_c0_g1_i1 6.813271114 1.767480569 11.85906166 6.709585308 2.746223602 0.013596534 0.049256782 Up 0.3640225 0.3580779 0.2942275 2.734219 1.710451 1.485066 XP_022850630.1 SNF1-related protein kinase regulatory subunit gamma-1-like [Olea europaea var. sylvestris] Q9CAR3|KINGL_ARATH SNF1-related protein kinase regulatory subunit gamma-1-like OS=Arabidopsis thaliana OX=3702 GN=CBSCBS2 PE=1 SV=1 -- -- -- -- -- -- KOG1764 "5'-AMP-activated protein kinase, gamma subunit" [C] METABOLISM Energy production and conversion T ENOG4110MRX snf1-related protein kinase regulatory subunit Biological Process: carbohydrate metabolic process (GO:0005975); PF00571.27 CBS domain TRINITY_DN8974_c0_g1_i1 11.65147634 4.40673834 18.89621433 4.288027306 2.100314093 0.008314216 0.032653331 Up 0.8235615 0 0.4140399 1.791524 1.27726 1.148783 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- "PF13855.5,PF12799.6" Leucine rich repeat|Leucine Rich repeats (2 copies) TRINITY_DN8975_c0_g1_i1 26.31651714 47.46752855 5.165505742 0.108821881 -3.199959424 0.001795311 0.00875354 Down 14.96794 5.430467 6.931938 0 1.640007 0.8118448 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8977_c0_g2_i1 4.627731553 8.152935552 1.102527553 0.135230746 -2.8865049 0.045403641 0.131249281 Down 0.3925794 2.280139 1.806966 0.4846906 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8978_c0_g1_i1 20.32476518 40.64953037 0 0 #NAME? 0.001761323 0.008606565 Down 5.798977 3.872146 0 0 0 0 KRH12661.1 hypothetical protein GLYMA_15G186100 [Glycine max] Q94BU8|GSDA_ARATH Guanosine deaminase OS=Arabidopsis thaliana OX=3702 GN=GSDA PE=1 SV=1 -- -- -- -- -- -- KOG1018 Cytosine deaminase FCY1 and related enzymes [F] METABOLISM Nucleotide transport and metabolism FJ COG0590 deaminase Cellular Component: nucleus (GO:0005634);|Cellular Component: cytoplasm (GO:0005737);|Biological Process: purine nucleoside catabolic process (GO:0006152);|Molecular Function: zinc ion binding (GO:0008270);|Molecular Function: guanosine deaminase activity (GO:0047974); "PF00383.22,PF14437.5" Cytidine and deoxycytidylate deaminase zinc-binding region|MafB19-like deaminase TRINITY_DN8979_c0_g1_i1 12.57021554 19.14287789 5.997553188 0.313304678 -1.674361785 0.049176055 0.139801898 Down 3.007882 2.10172 6.685086 1.251149 0.425275 1.331455 PIN23805.1 Apoptotic ATPase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8982_c0_g1_i1 12.46249845 24.9249969 0 0 #NAME? 0.000112386 0.000737427 Down 2.141405 2.938773 7.166712 0 0.000420697 1.25E-27 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8985_c0_g1_i1 7.501931278 15.00386256 0 0 #NAME? 2.63E-05 0.000196551 Down 2.134831 3.139855 2.723647 1.55E-39 3.59E-75 2.37E-52 XP_010668056.1 PREDICTED: uncharacterized protein LOC104885045 [Beta vulgaris subsp. vulgaris] P92555|M1250_ARATH Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410YRUW reverse transcriptase Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN8992_c0_g1_i1 9.256669362 18.51333872 0 0 #NAME? 2.08E-06 1.90E-05 Down 1.53917 1.492595 1.605575 0 0 0 RIA05736.1 hypothetical protein BRARA_K01840 [Brassica rapa] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN8992_c1_g1_i1 3.661641408 7.323282815 0 0 #NAME? 0.006689176 0.027173954 Down 0.8255825 1.337333 1.662396 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9000_c0_g1_i1 6.602348312 13.20469662 0 0 #NAME? 8.81E-05 0.000590955 Down 1.260562 1.943503 2.701828 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9009_c0_g1_i1 1931.530751 3863.061501 0 0 #NAME? 0 0 Down 151.6426 150.6863 154.9677 0 0 0 XP_016461127.1 PREDICTED: uncharacterized protein LOC107784497 [Nicotiana tabacum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9012_c0_g1_i1 8.749729432 17.49945886 0 0 #NAME? 5.37E-06 4.55E-05 Down 3.645398 4.73052 1.88855 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9017_c0_g1_i1 8.144072666 16.28814533 0 0 #NAME? 9.89E-06 8.01E-05 Down 1.078479 0.9670647 1.352837 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9017_c1_g1_i1 3.758396559 7.516793117 0 0 #NAME? 0.005657669 0.023539742 Down 1.06955 1.040277 2.206471 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9027_c0_g1_i1 5.721708224 11.44341645 0 0 #NAME? 0.000341252 0.002012575 Down 2.045134 1.977358 2.528735 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9056_c0_g1_i1 16.43005255 23.24793083 9.612174279 0.413463648 -1.274167604 0.042714341 0.125060119 Down 1.98977 2.63399 4.648395 1.114617 1.117087 0.7234135 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9057_c0_g2_i1 10.84732013 17.58947048 4.10516978 0.233387911 -2.099198258 0.014946243 0.053204623 Down 2.529389 1.223834 1.26776 0.3798404 0.1873928 0.3781683 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9061_c0_g1_i1 7.63889298 15.27778596 0 0 #NAME? 0.005642783 0.023499343 Down 2.998177 3.451909 0 0 0 0 KRH14891.1 hypothetical protein GLYMA_14G055200 [Glycine max] Q94AR4|CID2_ARATH Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=CID2 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z9AB Polyadenylate-binding protein-interacting protein -- -- -- TRINITY_DN9067_c0_g1_i2 16.63462301 26.17971318 7.089532844 0.270802541 -1.88468682 0.029421124 0.092750405 Down 5.041981 2.537668 1.635168 0.8156353 0.4127513 0.7891374 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9068_c0_g1_i2 83.87928935 161.2014268 6.557151881 0.040676761 -4.619651391 6.11E-35 4.10E-33 Down 24.27267 21.59922 21.23372 0.827014 1.352301 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9084_c0_g1_i1 1257.946998 692.784687 1823.109309 2.631566984 1.395922118 1.24E-53 1.50E-51 Up 66.97905 62.6817 65.35165 138.7014 145.8533 129.4069 XP_011035402.1 PREDICTED: 21 kDa seed protein-like [Populus euphratica] P80691|LSPI_CARPA Latex serine proteinase inhibitor OS=Carica papaya OX=3649 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867);|Cellular Component: extracellular space (GO:0005615); PF00197.17 Trypsin and protease inhibitor TRINITY_DN9088_c0_g1_i1 4.097530009 8.195060017 0 0 #NAME? 0.003553282 0.015793021 Down 1.646796 0.6286771 1.779615 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9089_c0_g1_i2 84.02509747 148.4551612 19.59503369 0.131992943 -2.921467293 3.22E-20 1.07E-18 Down 10.59134 8.408277 9.747236 1.979982 0.522493 0.5532152 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9094_c0_g1_i1 12.06279639 4.298563244 19.82702954 4.612478265 2.205542113 0.005995157 0.024738012 Up 0.1353002 0.9142955 0.5093879 1.273027 1.769266 2.720205 XP_022852474.1 zinc finger CCCH domain-containing protein 62-like [Olea europaea var. sylvestris] Q338N2|C3H62_ORYSJ Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0391300 PE=4 SV=2 sind:105157823 K11517 HAO (S)-2-hydroxy-acid oxidase ko00630|ko04146 Glyoxylate and dicarboxylate metabolism|Peroxisome -- -- -- -- -- S ENOG410YC7U zinc finger CCCH domain-containing protein Molecular Function: DNA binding (GO:0003677);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN9094_c1_g1_i1 8.938400302 1.19582996 16.68097064 13.94928309 3.802119073 0.000273118 0.001645559 Up 0.1035509 0.1997699 0.07766778 1.824088 0.8584983 0.9513998 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9099_c0_g1_i2 18.59818713 28.19899549 8.997378782 0.319067351 -1.648067106 0.00942891 0.036293268 Down 6.333248 5.009515 3.109534 0.6325362 1.259024 1.947443 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9105_c0_g1_i1 8.478003033 0 16.95600607 Inf Inf 0.006824673 0.027637825 Up 2.25E-64 0.0411266 3.38E-11 0.3281735 5.169614 2.136019 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9106_c0_g1_i1 89.22803616 152.4443147 26.0117576 0.170631208 -2.551046557 1.12E-17 3.15E-16 Down 18.28088 14.79494 18.16239 2.590818 2.124214 2.3259 XP_011075467.2 kirola-like [Sesamum indicum] P85524|KIRO_ACTDE Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG4111C37 response to biotic stimulus Biological Process: activation of immune response (GO:0002253);|Biological Process: defense response (GO:0006952); PF00407.18 Pathogenesis-related protein Bet v I family TRINITY_DN9125_c0_g1_i1 5.398313454 9.694099356 1.102527553 0.113731819 -3.136292159 0.022255217 0.073906727 Down 1.362865 1.932885 1.275216 0.3632064 0 0 XP_011069815.1 histone-lysine N-methyltransferase ASHR3 [Sesamum indicum] Q949T8|ASHR3_ARATH Histone-lysine N-methyltransferase ASHR3 OS=Arabidopsis thaliana OX=3702 GN=ASHR3 PE=1 SV=1 sind:105155618 K11423 "SETD2, SET2" histone-lysine N-methyltransferase SETD2 ko00310 Lysine degradation KOG1081 Transcription factor NSD1 and related SET domain proteins [K] INFORMATION STORAGE AND PROCESSING Transcription S COG2940 Histone-lysine N-methyltransferase Cellular Component: chromatin (GO:0000785);|Cellular Component: nucleus (GO:0005634);|Biological Process: multicellular organism development (GO:0007275);|Molecular Function: methyltransferase activity (GO:0008168);|Biological Process: histone methylation (GO:0016571);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN912_c0_g1_i1 3.515939362 0 7.031878724 Inf Inf 0.005197184 0.021885913 Up 0 0 0 1.173149 1.487471 0.9483485 AKR76260.1 beta-1 tubulin [Dendrobium catenatum] P11482|TBB1_VOLCA Tubulin beta chain OS=Volvox carteri OX=3067 GN=TUBB1 PE=3 SV=1 smo:SELMODRAFT_231661 K07375 TUBB tubulin beta ko04145 Phagosome KOG1375 Beta tubulin [Z] CELLULAR PROCESSES AND SIGNALING Cytoskeleton Z COG5023 protein polymerization Molecular Function: GTPase activity (GO:0003924);|Molecular Function: structural constituent of cytoskeleton (GO:0005200);|Molecular Function: GTP binding (GO:0005525);|Cellular Component: cytoplasm (GO:0005737);|Cellular Component: microtubule (GO:0005874);|Biological Process: microtubule-based process (GO:0007017); PF03953.16 Tubulin C-terminal domain TRINITY_DN9142_c0_g1_i2 40.70976603 76.58216055 4.837371515 0.063165775 -3.984713115 2.32E-15 5.50E-14 Down 6.299536 8.52839 5.42681 0.1181194 0.4614836 0.3811198 XP_019234414.1 PREDICTED: uncharacterized protein LOC109214907 [Nicotiana attenuata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YX6S Plant protein 1589 of unknown function (A_thal_3526) -- PF09713.9 Plant protein 1589 of unknown function (A_thal_3526) TRINITY_DN9151_c0_g1_i1 76.1342651 152.2685302 0 0 #NAME? 7.74E-48 7.93E-46 Down 1.969979 1.881156 2.126732 0 0 0 XP_023905045.1 uncharacterized protein LOC112016795 [Quercus suber] P93295|M310_ARATH Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y1CH Reverse transcriptase (RNA-dependent DNA polymerase) Cellular Component: mitochondrion (GO:0005739); "PF00078.26,PF03372.22,PF13966.5,PF13456.5,PF14392.5" Reverse transcriptase (RNA-dependent DNA polymerase)|Endonuclease/Exonuclease/phosphatase family|zinc-binding in reverse transcriptase|Reverse transcriptase-like|Zinc knuckle TRINITY_DN9151_c1_g1_i1 11.67481251 23.34962501 0 0 #NAME? 7.83E-08 8.76E-07 Down 2.894749 1.812233 1.426235 0 0 0 XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- PF14111.5 Domain of unknown function (DUF4283) TRINITY_DN9178_c0_g2_i1 4.487633398 8.975266795 0 0 #NAME? 0.00860399 0.033645841 Down 0.2845848 3.066 1.49981 0 0 0 XP_012830196.1 PREDICTED: wall-associated receptor kinase 5-like [Erythranthe guttata] Q9S9M2|WAKLD_ARATH Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana OX=3702 GN=WAKL4 PE=2 SV=2 -- -- -- -- -- -- -- -- -- -- -- T COG0515 Serine Threonine protein kinase -- -- -- TRINITY_DN9180_c0_g1_i1 14.38622409 26.45771811 2.31473008 0.087487896 -3.514772763 1.24E-05 9.88E-05 Down 5.832691 3.444212 6.58573 0 0 1.176965 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9185_c0_g1_i1 12.27771077 24.55542155 0 0 #NAME? 4.30E-06 3.71E-05 Down 1.072165 3.123046 1.624441 0 0 0 CDP04273.1 unnamed protein product [Coffea canephora] Q6NMB7|WTR7_ARATH WAT1-related protein At1g43650 OS=Arabidopsis thaliana OX=3702 GN=At1g43650 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG41118PQ auxin-induced protein 5NG4-like Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transmembrane transporter activity (GO:0022857); -- -- TRINITY_DN9187_c0_g1_i1 7.203352779 2.232514886 12.17419067 5.453128553 2.447084166 0.0233694 0.076847811 Up 0 0.5795052 0.4383582 2.13224 1.60346 0.8587762 XP_022898792.1 phytochrome E isoform X2 [Olea europaea var. sylvestris] P55004|PHYE_IPONI Phytochrome E OS=Ipomoea nil OX=35883 GN=PHYE PE=2 SV=1 rcu:8284027 K12123 PHYE phytochrome E -- -- -- -- -- -- -- T COG4251 "red, far-red light phototransduction" "Molecular Function: phosphorelay sensor kinase activity (GO:0000155);|Cellular Component: intracellular (GO:0005622);|Biological Process: regulation of transcription, DNA-templated (GO:0006355);|Biological Process: detection of visible light (GO:0009584);|Biological Process: red, far-red light phototransduction (GO:0009585);|Molecular Function: photoreceptor activity (GO:0009881);|Biological Process: protein-tetrapyrrole linkage (GO:0017006);|Biological Process: protein-chromophore linkage (GO:0018298);|Molecular Function: protein homodimerization activity (GO:0042803);" PF00989.24 PAS fold TRINITY_DN9193_c0_g1_i1 45.81874971 91.63749943 0 0 #NAME? 0.000645106 0.003537912 Down 8.130322 4.876008 2.45E-60 7.77E-27 1.50E-22 2.83E-42 KRH68731.1 hypothetical protein GLYMA_03G247000 [Glycine max] A3C4S4|GME1_ORYSJ "GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GME-1 PE=1 SV=1" gmx:100794772 K10046 GME "GDP-D-mannose 3', 5'-epimerase" ko00520|ko00053 Amino sugar and nucleotide sugar metabolism|Ascorbate and aldarate metabolism KOG1429 dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [GM] METABOLISM|CELLULAR PROCESSES AND SIGNALING Carbohydrate transport and metabolism |Cell wall/membrane/envelope biogenesis M COG0451 Nad-dependent epimerase dehydratase "Biological Process: L-ascorbic acid biosynthetic process (GO:0019853);|Molecular Function: GDP-mannose 3,5-epimerase activity (GO:0047918);|Molecular Function: NAD binding (GO:0051287);" "PF01370.20,PF16363.4,PF01073.18,PF13460.5" "NAD dependent epimerase/dehydratase family|GDP-mannose 4,6 dehydratase|3-beta hydroxysteroid dehydrogenase/isomerase family|NAD(P)H-binding" TRINITY_DN9210_c0_g1_i1 9.676861143 18.96793394 0.385788347 0.020338976 -5.619609168 0.00012127 0.000789398 Down 0.8846762 2.731212 1.45934 0 0 0.120716 XP_019252764.1 PREDICTED: uncharacterized protein LOC109231560 [Nicotiana attenuata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9220_c0_g1_i1 7.761492211 15.52298442 0 0 #NAME? 1.77E-05 0.000137314 Down 2.192484 2.667651 2.803226 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9220_c0_g2_i1 7.477987701 14.9559754 0 0 #NAME? 2.92E-05 0.000216647 Down 2.012977 3.544902 2.240673 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9229_c0_g1_i2 3.548483025 7.09696605 0 0 #NAME? 0.008731698 0.034030908 Down 1.593862 0.939507 0.9759954 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9231_c1_g1_i1 14.88376131 8.319839784 21.44768283 2.577896135 1.366194138 0.040345207 0.119456656 Up 1.372037 0.5829765 0.7572889 2.467355 1.882365 1.365185 XP_012852840.1 "PREDICTED: CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2 isoform X2 [Erythranthe guttata]" Q8RY00|SIA2_ARATH Sialyltransferase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=SIA2 PE=2 SV=1 -- -- -- -- -- -- KOG2692 Sialyltransferase [G] METABOLISM Carbohydrate transport and metabolism S ENOG410XT8P "ST3 beta-galactoside alpha-2,3-sialyltransferase" "Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: endosome (GO:0005768);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: trans-Golgi network (GO:0005802);|Biological Process: protein glycosylation (GO:0006486);|Biological Process: pollen germination (GO:0009846);|Biological Process: pollen tube growth (GO:0009860);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);|Biological Process: sialylation (GO:0097503);" -- -- TRINITY_DN9239_c1_g1_i1 25.04097496 50.08194992 0 0 #NAME? 3.05E-16 7.73E-15 Down 3.499794 3.389274 2.895314 0 0 0 XP_012839839.1 PREDICTED: putative nuclease HARBI1 [Erythranthe guttata] Q9M2U3|ALPL_ARATH Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1 -- -- -- -- -- -- KOG4585 Predicted transposase [L] INFORMATION STORAGE AND PROCESSING "Replication, recombination and repair " S ENOG411206Y transposon protein Molecular Function: nuclease activity (GO:0004518);|Cellular Component: nucleus (GO:0005634);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN9246_c0_g1_i1 17.03252735 26.58445956 7.480595139 0.281389777 -1.82935818 0.006222282 0.02551473 Down 4.655801 4.024988 2.627998 1.132397 0.378093 1.142725 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9258_c0_g1_i2 4.239273558 8.478547115 0 0 #NAME? 0.002886748 0.013226826 Down 0.4933517 2.124827 1.731507 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN925_c0_g1_i1 3.943559982 0 7.887119964 Inf Inf 0.002753329 0.012706573 Up 0 0 0 0.676855 1.048639 2.277275 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9268_c0_g1_i1 12.35917756 20.29278238 4.425572742 0.218086049 -2.197030608 0.00603557 0.024881561 Down 1.652446 2.431986 2.0037 0.5164769 0.3532625 0.2223914 XP_012840537.1 PREDICTED: oleosin 18.2 kDa-like [Erythranthe guttata] P29527|OLEO6_GOSHI Oleosin 18.2 kDa OS=Gossypium hirsutum OX=3635 GN=MATP6-A PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YRX9 May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth Cellular Component: monolayer-surrounded lipid storage body (GO:0012511);|Cellular Component: integral component of membrane (GO:0016021); PF01277.16 Oleosin TRINITY_DN9269_c0_g1_i1 9.68079632 19.36159264 0 0 #NAME? 1.44E-06 1.35E-05 Down 5.277604 3.781846 2.069984 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9285_c0_g1_i1 5.395536111 10.79107222 0 0 #NAME? 0.000635484 0.003490205 Down 1.361585 0.7677773 0.6061929 0 0 0 XP_012856881.1 PREDICTED: glutamate receptor 2.7-like [Erythranthe guttata] Q8LGN0|GLR27_ARATH Glutamate receptor 2.7 OS=Arabidopsis thaliana OX=3702 GN=GLR2.7 PE=2 SV=3 spen:107023365 K05387 GRIP "glutamate receptor, ionotropic, plant" -- -- KOG1052 Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [PET] METABOLISM|METABOLISM|CELLULAR PROCESSES AND SIGNALING Inorganic ion transport and metabolism |Amino acid transport and metabolism |Signal transduction mechanisms P ENOG41120B7 Glutamate-gated receptor that probably acts as non- selective cation channel (By similarity) Molecular Function: ionotropic glutamate receptor activity (GO:0004970);|Molecular Function: calcium channel activity (GO:0005262);|Cellular Component: vacuole (GO:0005773);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: calcium ion transport (GO:0006816);|Molecular Function: glutamate receptor activity (GO:0008066);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: calcium-mediated signaling (GO:0019722);|Biological Process: cellular response to amino acid stimulus (GO:0071230); "PF00060.25,PF00497.19" "Ligand-gated ion channel|Bacterial extracellular solute-binding proteins, family 3" TRINITY_DN9295_c0_g1_i1 10.83393816 3.216671069 18.45120524 5.736118133 2.520074736 0.032357191 0.100340893 Up 0 0.6720806 1.112649 1.479749 2.279323 5.287936 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9300_c0_g1_i1 60.41859712 88.66091367 32.17628057 0.362913929 -1.462300663 1.22E-05 9.71E-05 Down 5.014041 4.880427 5.622644 1.043105 1.369896 2.145216 GAU18465.1 hypothetical protein TSUD_366480 [Trifolium subterraneum] -- -- -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein -- -- -- TRINITY_DN9309_c0_g1_i1 3.953448253 7.906896507 0 0 #NAME? 0.004382768 0.018941921 Down 0.5062675 2.570134 2.03096 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN931_c0_g1_i1 18.88314125 35.57704925 2.18923326 0.061534987 -4.022449274 6.81E-08 7.69E-07 Down 5.017695 7.578693 7.210261 0.5168969 0.5199523 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9329_c0_g1_i2 5.847963766 9.855924295 1.840003238 0.186690074 -2.42128287 0.045793776 0.132107841 Down 0.7832252 0.6747499 1.138708 0.1002569 0.1953258 0.1031052 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9338_c0_g1_i1 5.837513948 10.9034512 0.771576693 0.070764447 -3.820831479 0.005777006 0.023976926 Down 1.821559 2.242039 1.428041 0 0 0.2668625 PSS35035.1 Endonuclease [Actinidia chinensis var. chinensis] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN9338_c0_g2_i1 5.296916714 9.491305875 1.102527553 0.11616184 -3.105791886 0.021728254 0.072395085 Down 1.304419 0.6302755 1.989262 0.339324 8.49E-70 0 KZV56298.1 hypothetical protein F511_00295 [Dorcoceras hygrometricum] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF00665.25 Integrase core domain TRINITY_DN9339_c0_g1_i1 9.314287886 15.542269 3.086306774 0.198575046 -2.332243761 0.012365929 0.045436831 Down 1.419543 4.22764 3.901972 0 0 1.593892 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9340_c0_g1_i1 36.805397 17.90888165 55.70191235 3.110295407 1.63705161 0.000429073 0.00246543 Up 4.460857 2.650017 3.108485 8.776561 11.44562 5.550726 XP_011088870.1 "uncharacterized protein LOC105169998, partial [Sesamum indicum]" -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410Z762 NA -- -- -- TRINITY_DN9343_c0_g1_i1 9.932542703 15.69453024 4.170555164 0.265733036 -1.911950502 0.032667318 0.101116097 Down 3.773058 2.320715 1.529068 0.5370904 0 1.032381 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9345_c0_g1_i1 19.52328531 3.603691673 35.44287894 9.835158541 3.297948309 8.69E-05 0.000583761 Up 0.2384794 0.04685948 1.094104 2.667747 5.311534 2.743473 XP_024046504.1 receptor-like protein EIX1 [Citrus clementina] Q6JN47|EIX1_SOLLC Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2 -- -- -- -- -- -- KOG0619 FOG: Leucine rich repeat [R] POORLY CHARACTERIZED General function prediction only S COG4886 leucine Rich Repeat Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: defense response to fungus (GO:0050832); PF08263.11 Leucine rich repeat N-terminal domain TRINITY_DN935_c0_g1_i1 7.74120938 15.48241876 0 0 #NAME? 1.81E-05 0.00013963 Down 1.34821 2.217955 2.05973 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9362_c0_g1_i1 4.396052308 0.936269028 7.855835588 8.390575095 3.068769697 0.034576889 0.105777429 Up 0 0.5621678 0 1.301623 0.864541 1.854812 XP_012840171.1 PREDICTED: cation/H(+) antiporter 9-like [Erythranthe guttata] Q9FFB8|CHX3_ARATH Cation/H(+) antiporter 3 OS=Arabidopsis thaliana OX=3702 GN=CHX3 PE=2 SV=1 -- -- -- -- -- -- KOG1650 Predicted K+/H+-antiporter [P] METABOLISM Inorganic ion transport and metabolism P COG0475 Sodium hydrogen exchanger Biological Process: potassium ion transport (GO:0006813);|Biological Process: regulation of pH (GO:0006885);|Cellular Component: endomembrane system (GO:0012505);|Molecular Function: solute:proton antiporter activity (GO:0015299);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN9375_c0_g1_i1 4.545381692 9.090763384 0 0 #NAME? 0.001867359 0.009058026 Down 1.443082 1.854404 2.21253 0 0 0 KYP47723.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan] P93295|M310_ARATH Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only BQ COG0123 Histone deacetylase Cellular Component: mitochondrion (GO:0005739); -- -- TRINITY_DN9383_c0_g1_i1 7.757214482 12.51178674 3.002642227 0.239985087 -2.058983338 0.042801629 0.125226836 Down 1.628179 2.208597 1.759345 0.2750942 0.2755403 0.5652485 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9387_c0_g1_i1 9.523345214 15.37159858 3.675091843 0.239083256 -2.064414998 0.024372399 0.079569642 Down 3.062313 1.367722 2.391507 1.259397 1.39E-58 1.09E-69 PIN21665.1 "Transporter, ABC superfamily (Breast cancer resistance protein) [Handroanthus impetiginosus]" Q9FLX5|AB8G_ARATH ABC transporter G family member 8 OS=Arabidopsis thaliana OX=3702 GN=ABCG8 PE=2 SV=1 -- -- -- -- -- -- KOG0061 "Transporter, ABC superfamily (Breast cancer resistance protein)" [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " V COG1131 (ABC) transporter "Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);|Biological Process: transmembrane transport (GO:0055085);" PF01061.23 ABC-2 type transporter TRINITY_DN9388_c0_g1_i1 18.96251376 34.26575752 3.659269997 0.106790868 -3.227139808 2.71E-06 2.42E-05 Down 7.26677 4.83646 8.107139 1.1482 0.5695681 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9400_c0_g1_i1 23.80379981 33.54384217 14.06375745 0.419264954 -1.254065853 0.017071398 0.059317357 Down 5.390987 2.895167 6.876149 1.641886 2.049795 1.38971 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9400_c0_g2_i1 10.76266122 3.826207433 17.69911502 4.625759404 2.20969023 0.011917925 0.044076124 Up 1.169367 1.029205 3.13E-98 1.813866 4.594893 2.090688 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9401_c0_g1_i1 9.487911798 15.20933594 3.766487655 0.247643136 -2.013665459 0.024653843 0.080280624 Down 1.681226 4.076694 3.264982 0.9311536 0 0.9076797 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9406_c0_g1_i1 10.21766137 20.43532274 0 0 #NAME? 5.00E-07 5.03E-06 Down 2.386312 1.536759 2.325474 0 0 0 XP_021652040.1 uncharacterized protein LOC110643835 [Hevea brasiliensis] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF07727.13 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN9408_c0_g1_i1 34.16747855 60.27121015 8.063746943 0.133791024 -2.901946762 6.67E-09 8.59E-08 Down 2.335944 3.052487 2.04415 0.3357929 0.4100346 0.08166405 AJQ20626.1 Ketoacyl-ACP Synthase I [Salvia miltiorrhiza] P52410|KASC1_ARATH "3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KAS1 PE=1 SV=2" sind:105165117 K09458 fabF 3-oxoacyl-[acyl-carrier-protein] synthase II ko00061|ko00780 Fatty acid biosynthesis|Biotin metabolism KOG1394 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [IQ] METABOLISM|METABOLISM "Lipid transport and metabolism |Secondary metabolites biosynthesis, transport and catabolism " I COG0304 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (By similarity) Molecular Function: 3-oxoacyl-[acyl-carrier-protein] synthase activity (GO:0004315);|Biological Process: fatty acid biosynthetic process (GO:0006633);|Cellular Component: chloroplast stroma (GO:0009570); "PF00109.25,PF02801.21" "Beta-ketoacyl synthase, N-terminal domain|Beta-ketoacyl synthase, C-terminal domain" TRINITY_DN9409_c0_g1_i1 5.022597944 10.04519589 0 0 #NAME? 0.001040143 0.00540715 Down 1.381414 2.976013 1.318269 0 0 0 XP_011085998.1 uncharacterized protein LOC105167859 isoform X1 [Sesamum indicum] -- -- -- -- -- -- -- -- KOG4372 Predicted alpha/beta hydrolase [R] POORLY CHARACTERIZED General function prediction only S ENOG41109CS Putative serine esterase (DUF676) -- -- -- TRINITY_DN9414_c0_g1_i2 8.424253136 1.601014041 15.24749223 9.523646792 3.251514116 0.001249356 0.006362844 Up 0.7104172 0.3478377 0 3.28146 2.00085 2.553439 PIN04017.1 hypothetical protein CDL12_23450 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111E3N NA -- -- -- TRINITY_DN9418_c1_g1_i1 8.23911027 2.445747469 14.03247307 5.737498761 2.520421937 0.009178034 0.035484071 Up 0.9146456 0 0.1760125 1.880231 1.891128 1.077919 PNT50738.1 hypothetical protein POPTR_002G202400v3 [Populus trichocarpa] O81416|GUN17_ARATH Endoglucanase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g02290 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- G ENOG410XPC9 hydrolase family Cellular Component: extracellular region (GO:0005576);|Molecular Function: cellulase activity (GO:0008810);|Biological Process: cellulose catabolic process (GO:0030245);|Biological Process: cell wall organization (GO:0071555); -- -- TRINITY_DN9429_c0_g1_i1 3.817125695 7.634251391 0 0 #NAME? 0.006367498 0.026018528 Down 1.745026 1.083408 0.5667747 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9432_c0_g1_i1 17.59989217 35.19978435 0 0 #NAME? 3.16E-10 4.76E-09 Down 7.35345 3.745678 4.319868 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9434_c0_g1_i1 3.740434523 7.480869046 0 0 #NAME? 0.006239427 0.025558132 Down 0.479741 2.797148 1.528053 0 0 0 XP_012832497.1 PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Erythranthe guttata] -- -- -- -- -- -- -- -- KOG3033 Predicted PhzC/PhzF-type epimerase [R] POORLY CHARACTERIZED General function prediction only S COG0384 "phenazine biosynthesis protein, phzf family" -- PF02567.15 Phenazine biosynthesis-like protein TRINITY_DN9457_c0_g2_i1 6.010321238 10.15181218 1.868830298 0.184088344 -2.441529809 0.046252967 0.133161725 Down 1.348742 1.847281 0.9156813 0.283978 0.135383 0.2845449 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9463_c0_g2_i1 14.20637057 25.84017685 2.57256429 0.09955676 -3.328336907 0.01558441 0.055115114 Down 4.778628 0.8430083 2.694468 0.6831135 1.39E-50 1.89E-42 XP_011090333.1 uncharacterized protein LOC105171035 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG4111USD Late embryogenesis abundant protein -- -- -- TRINITY_DN9469_c0_g1_i1 22.095781 42.01815058 2.173411413 0.051725537 -4.272979465 1.35E-09 1.89E-08 Down 6.544058 7.631032 8.810445 0 0.9571181 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN946_c0_g1_i1 4.57474626 9.149492521 0 0 #NAME? 0.001978937 0.009540135 Down 1.214579 1.392908 0.9282651 0 0 0 XP_011098379.1 uncharacterized protein LOC105177054 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410ZJGG Transposon protein -- PF10551.8 MULE transposase domain TRINITY_DN9476_c0_g1_i1 12.6159603 19.29202152 5.939899068 0.307894072 -1.699494003 0.025984597 0.083808358 Down 2.849302 1.976365 2.807396 0.5698029 0.7035018 0.632539 XP_021890754.1 17.1 kDa class II heat shock protein-like [Carica papaya] O82013|HSP21_SOLPE 17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1 sind:105164638 K13993 HSP20 HSP20 family protein ko04141 Protein processing in endoplasmic reticulum KOG0710 Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " O COG0071 response to heat Cellular Component: cytoplasm (GO:0005737); PF00011.20 Hsp20/alpha crystallin family TRINITY_DN9480_c0_g1_i1 11.85037185 18.07843097 5.622312739 0.310995614 -1.685033861 0.035383902 0.107744949 Down 2.30604 3.320271 1.791683 1.117371 0 0.7238575 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9484_c0_g1_i1 23.77750517 8.130130487 39.42487986 4.849230886 2.277755946 0.002931182 0.013392566 Up 0.6719967 0.6840443 3.701003 9.422045 3.958346 6.198424 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9486_c0_g1_i1 14.1927231 28.02321096 0.362235236 0.012926257 -6.273551574 1.00E-07 1.11E-06 Down 2.838862 4.798223 2.172254 0 0.138837 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9492_c0_g1_i1 8.056959803 16.11391961 0 0 #NAME? 1.07E-05 8.60E-05 Down 1.026625 2.735059 2.587324 0 0 0 XP_012828194.1 PREDICTED: pentatricopeptide repeat-containing protein At3g14730 [Erythranthe guttata] Q9SS83|PP220_ARATH "Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1" -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN9493_c0_g1_i1 5.101609911 10.20321982 0 0 #NAME? 0.010592439 0.039912225 Down 2.687329 2.586264 0 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9496_c0_g1_i2 41.47457836 63.29437092 19.65478581 0.31052976 -1.687196557 5.22E-05 0.000368793 Down 6.875919 9.943464 6.790596 2.583432 1.608933 1.670618 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9502_c0_g1_i1 9.95500024 19.91000048 0 0 #NAME? 6.85E-07 6.74E-06 Down 1.964969 2.077435 2.750573 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9502_c0_g2_i1 6.82888393 13.65776786 0 0 #NAME? 6.12E-05 0.000424651 Down 1.74997 1.717193 3.213471 0 0 0 PIM97520.1 hypothetical protein CDL12_30010 [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG411155F FAS1 -- -- -- TRINITY_DN9511_c0_g1_i1 5.280617484 10.56123497 0 0 #NAME? 0.000645443 0.003539334 Down 2.681182 0.7252982 2.367493 0 0 0 XP_011081395.1 phosphatidylinositol/phosphatidylcholine transfer protein SFH11 [Sesamum indicum] F4JYJ3|SFH11_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH11 OS=Arabidopsis thaliana OX=3702 GN=SFH11 PE=3 SV=1 -- -- -- -- -- -- KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins [I] METABOLISM Lipid transport and metabolism S ENOG410XRSQ Transfer protein Cellular Component: Golgi membrane (GO:0000139);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: protein transport (GO:0015031); PF03765.14 "CRAL/TRIO, N-terminal domain" TRINITY_DN9517_c0_g1_i2 10.24695556 19.03442227 1.45948884 0.076676288 -3.705075698 0.000277027 0.001666678 Down 2.235384 2.572998 1.018753 0.2044055 0.2052473 0 PIN23327.1 Non-specific serine/threonine protein kinase [Handroanthus impetiginosus] Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat Molecular Function: protein serine/threonine kinase activity (GO:0004674);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN9521_c0_g1_i1 10.51407533 18.76825807 2.259892593 0.120410354 -3.053968644 0.000855386 0.004546135 Down 3.52731 2.178844 4.11398 0.4447378 0 0.4491675 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9526_c0_g1_i1 5.584821654 9.626489921 1.543153387 0.16030281 -2.641128378 0.040698459 0.120314239 Down 0.7292274 3.522124 1.700755 0 0 0.8516747 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9540_c0_g1_i2 16.14762836 3.209349575 29.08590715 9.062866624 3.179967453 0.000350007 0.002056683 Up 0.2801392 0.4036309 0.3192924 1.964701 3.636532 1.384854 AJD25197.1 cytochrome P450 CYP81Q41 [Salvia miltiorrhiza] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9552_c0_g1_i2 24.89330445 44.4797845 5.306824409 0.119308681 -3.067229079 4.89E-05 0.000347036 Down 8.182736 13.12899 5.813233 0 0.6924656 1.998187 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9554_c0_g1_i1 7.164137781 14.32827556 0 0 #NAME? 5.63E-05 0.000394182 Down 1.082679 2.792456 4.041713 1.60E-25 6.00E-33 0 PNX70846.1 "hypothetical protein L195_g057802, partial [Trifolium pratense]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only -- -- -- -- -- -- TRINITY_DN9557_c0_g1_i1 18.82317563 1.913103717 35.73324754 18.67815489 4.223280041 5.84E-09 7.57E-08 Up 0.543099 0.5396278 0 4.031441 7.277532 7.396075 XP_011076332.1 21 kDa protein [Sesamum indicum] Q9STY5|PMI11_ARATH Pectinesterase inhibitor 11 OS=Arabidopsis thaliana OX=3702 GN=PMEI11 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKJY Invertase pectin methylesterase inhibitor family protein Molecular Function: enzyme inhibitor activity (GO:0004857);|Biological Process: negative regulation of catalytic activity (GO:0043086);|Molecular Function: pectinesterase inhibitor activity (GO:0046910);|Cellular Component: apoplast (GO:0048046);|Biological Process: plant-type cell wall organization or biogenesis (GO:0071669); -- -- TRINITY_DN9557_c0_g2_i1 14.78570525 0.651223126 28.92018738 44.40903008 5.472781157 6.47E-09 8.35E-08 Up 0.2631748 1.23E-44 0 3.466473 3.334129 2.858935 KZV33604.1 21 kDa protein [Dorcoceras hygrometricum] P17407|21KD_DAUCA 21 kDa protein OS=Daucus carota OX=4039 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YKJY Invertase pectin methylesterase inhibitor family protein Molecular Function: enzyme inhibitor activity (GO:0004857); PF04043.14 Plant invertase/pectin methylesterase inhibitor TRINITY_DN9559_c0_g1_i1 18.60792147 27.96872053 9.24712241 0.330623719 -1.596737865 0.010063221 0.038235522 Down 3.467932 4.265269 4.16062 0.6511541 1.634507 0.9527731 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9568_c0_g1_i2 573.989897 955.5684479 192.411346 0.201357994 -2.312165344 2.32E-75 4.36E-73 Down 51.80631 51.97743 53.46939 8.284031 9.498996 7.732753 PIN02438.1 Hydroxyindole-O-methyltransferase [Handroanthus impetiginosus] Q6VMW0|Q8OMT_MENPI 8-hydroxyquercetin 8-O-methyltransferase OS=Mentha piperita OX=34256 GN=OMT2 PE=1 SV=1 -- -- -- -- -- -- KOG3178 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS7T o-methyltransferase Molecular Function: O-methyltransferase activity (GO:0008171);|Biological Process: flavonoid metabolic process (GO:0009812);|Molecular Function: 8-hydroxyquercitin 8-O-methyltransferase activity (GO:0030761);|Biological Process: methylation (GO:0032259);|Molecular Function: protein dimerization activity (GO:0046983); "PF00891.17,PF08100.10" O-methyltransferase|Dimerisation domain TRINITY_DN9569_c0_g1_i1 47.38325515 19.36427255 75.40223776 3.893884347 1.961210035 3.30E-07 3.40E-06 Up 2.845731 1.717667 1.948959 6.318961 7.164846 6.873234 EYU24903.1 hypothetical protein MIMGU_mgv1a025504mg [Erythranthe guttata] O48915|NDR1_ARATH Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- -- -- -- "Cellular Component: plasma membrane (GO:0005886);|Cellular Component: plasmodesma (GO:0009506);|Biological Process: plant-type hypersensitive response (GO:0009626);|Biological Process: defense response, incompatible interaction (GO:0009814);|Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);|Biological Process: defense response to fungus, incompatible interaction (GO:0009817);|Biological Process: positive regulation of cell death (GO:0010942);|Cellular Component: membrane (GO:0016020);|Biological Process: defense response to bacterium (GO:0042742);|Cellular Component: anchored component of plasma membrane (GO:0046658);" PF03168.12 Late embryogenesis abundant protein TRINITY_DN9570_c0_g1_i1 21.09753924 36.25799605 5.937082435 0.163745465 -2.610473141 2.02E-05 0.000154909 Down 1.111881 1.289928 1.725514 0 0.3428539 0.2253056 XP_019451747.1 PREDICTED: uncharacterized protein LOC109353840 [Lupinus angustifolius] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); PF00078.26 Reverse transcriptase (RNA-dependent DNA polymerase) TRINITY_DN9575_c0_g1_i1 12.02174352 4.300122049 19.74336499 4.591349912 2.198918386 0.006038017 0.024887286 Up 0.4093548 0.1589275 0.3746382 0.9070438 1.24838 1.368634 XP_022841611.1 probable metal-nicotianamine transporter YSL7 [Olea europaea var. sylvestris] Q9LUN2|YSL5_ARATH Probable metal-nicotianamine transporter YSL5 OS=Arabidopsis thaliana OX=3702 GN=YSL5 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG1297 oligo-peptide transporter Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: transmembrane transport (GO:0055085); PF03169.14 OPT oligopeptide transporter protein TRINITY_DN9575_c0_g2_i1 13.45874298 1.476234274 25.44125169 17.23388499 4.107176056 5.42E-06 4.59E-05 Up 0 0 0.4883643 1.364589 1.946535 3.046292 XP_011072072.1 probable metal-nicotianamine transporter YSL7 [Sesamum indicum] Q9SHY2|YSL7_ARATH Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana OX=3702 GN=YSL7 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S COG1297 oligo-peptide transporter Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: transmembrane transport (GO:0055085); PF03169.14 OPT oligopeptide transporter protein TRINITY_DN9577_c0_g1_i1 13.78124017 22.09730812 5.465172226 0.247322986 -2.015531766 0.006152434 0.025284081 Down 1.874412 2.407861 3.661524 0.6609557 0.9812848 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9581_c0_g1_i1 15.02108823 28.95019681 1.091979655 0.037719248 -4.728555273 2.13E-07 2.24E-06 Down 1.019052 1.363905 0.9962118 0.05076855 0.08310202 7.62E-30 XP_022843226.1 uncharacterized protein LOC111366761 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410YQZ5 Retro-transposon -- PF03732.16 Retrotransposon gag protein TRINITY_DN9591_c0_g1_i1 14.7725411 23.16455731 6.380524902 0.275443421 -1.860172092 0.008303374 0.032622039 Down 2.334945 2.460118 2.524865 0.1983143 0.5822704 0.9533832 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9596_c1_g1_i1 4.57474626 9.149492521 0 0 #NAME? 0.001978937 0.009540135 Down 1.962893 1.928929 1.486815 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN959_c0_g1_i2 29.3774484 40.51531024 18.23958656 0.450189976 -1.15139416 0.017236035 0.059811585 Down 4.128608 3.368586 3.502311 1.368089 1.17665 1.436767 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9605_c0_g2_i1 14.09849949 28.19699898 0 0 #NAME? 3.57E-09 4.78E-08 Down 2.560389 5.172718 2.887117 1.17E-52 1.64E-62 7.00E-77 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9607_c0_g1_i1 27.85777894 54.61303032 1.102527553 0.020187994 -5.630358595 1.05E-14 2.37E-13 Down 2.127931 2.397472 1.991325 0.1077312 0 0 XP_025015038.1 uncharacterized protein LOC112536496 [Ricinus communis] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9608_c0_g1_i2 8.643978514 16.20125132 1.086705707 0.067075418 -3.898072047 0.000527509 0.00296022 Down 2.490068 1.969928 2.316534 0 0.374223 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9609_c0_g1_i1 6.790195628 12.07379619 1.506595062 0.124782217 -3.002515743 0.010915775 0.040892941 Down 1.951567 1.476283 1.348883 0.2147197 0 0.2282462 XP_012838087.1 PREDICTED: reticulon-like protein B5 [Erythranthe guttata] Q9SUT9|RTNLB_ARATH Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1 -- -- -- -- -- -- KOG1792 Reticulon [U] CELLULAR PROCESSES AND SIGNALING "Intracellular trafficking, secretion, and vesicular transport " U ENOG410XPKH Reticulon Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Cellular Component: Golgi apparatus (GO:0005794);|Cellular Component: plasma membrane (GO:0005886);|Cellular Component: integral component of cytoplasmic side of endoplasmic reticulum membrane (GO:0071458);|Cellular Component: endoplasmic reticulum tubular network (GO:0071782);|Biological Process: endoplasmic reticulum tubular network organization (GO:0071786); PF02453.16 Reticulon TRINITY_DN9644_c0_g1_i1 11.63863672 3.302443979 19.97482946 6.048499106 2.596577192 0.001419378 0.007118532 Up 0.8485358 0.4119829 0.3287884 2.292534 3.574649 2.300651 XP_012844174.1 "PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Erythranthe guttata]" O82380|PP175_ARATH "Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1" -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN9647_c0_g2_i1 27.46682042 1.248358704 53.68528213 43.00469245 5.426422183 1.63E-15 3.92E-14 Up 3.07E-84 0.3259972 2.02E-86 3.544475 4.55879 3.277932 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN964_c0_g1_i1 8.602140657 3.489753888 13.71452743 3.929941155 1.97450771 0.045278244 0.130945168 Up 0.3014822 0.2951539 1.132995 1.393006 2.24892 1.769684 XP_012852894.1 PREDICTED: putative late blight resistance protein homolog R1A-3 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9651_c0_g1_i1 32.87498889 62.10125569 3.648722099 0.058754401 -4.089159261 4.64E-13 9.20E-12 Down 4.001573 2.987213 3.831205 0.2639864 0.2639096 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9652_c0_g1_i1 29.46504618 8.249550445 50.68054191 6.143430754 2.619044543 1.02E-07 1.12E-06 Up 1.397855 2.054235 0 6.937486 5.753762 4.133693 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9653_c0_g1_i1 8.030914283 16.06182857 0 0 #NAME? 1.29E-05 0.000102396 Down 2.962402 1.700476 2.19194 0 0 0 XP_022854279.1 "ATP-dependent RNA helicase SUV3, mitochondrial isoform X1 [Olea europaea var. sylvestris]" Q10D00|SUV3M_ORYSJ "ATP-dependent RNA helicase SUV3, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SUV3 PE=1 SV=1" egu:105053371 K17675 "SUPV3L1, SUV3" ATP-dependent RNA helicase SUPV3L1/SUV3 -- -- KOG0953 "Mitochondrial RNA helicase SUV3, DEAD-box superfamily" [A] INFORMATION STORAGE AND PROCESSING RNA processing and modification L ENOG410XSEY ATPdependent RNA helicase Biological Process: mitochondrial RNA 3'-end processing (GO:0000965);|Molecular Function: DNA helicase activity (GO:0003678);|Molecular Function: RNA helicase activity (GO:0003724);|Molecular Function: ATP-dependent RNA helicase activity (GO:0004004);|Molecular Function: ATP binding (GO:0005524);|Cellular Component: nucleus (GO:0005634);|Biological Process: RNA catabolic process (GO:0006401);|Biological Process: response to salt stress (GO:0009651);|Biological Process: auxin-activated signaling pathway (GO:0009734);|Biological Process: cytokinin-activated signaling pathway (GO:0009736);|Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);|Biological Process: positive regulation of gibberellic acid mediated signaling pathway (GO:0009939);|Biological Process: positive regulation of auxin mediated signaling pathway (GO:0010929);|Molecular Function: ATPase activity (GO:0016887);|Cellular Component: mitochondrial nucleoid (GO:0042645);|Cellular Component: mitochondrial degradosome (GO:0045025);|Biological Process: positive regulation of cytokinin-activated signaling pathway (GO:0080038);|Biological Process: positive regulation of response to salt stress (GO:1901002);|Biological Process: positive regulation of response to water deprivation (GO:1902584); -- -- TRINITY_DN9659_c0_g1_i1 7.904947127 3.249915236 12.55997902 3.864709725 1.950360059 0.044352586 0.128760357 Up 0.4371911 0.07126208 0.223657 1.102013 0.8520065 0.533654 XP_011084973.1 uncharacterized protein LOC105167097 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG410YE9P Protein of unknown function (DUF620) -- PF04788.11 Protein of unknown function (DUF620) TRINITY_DN965_c0_g1_i1 10.42251181 20.12055316 0.724470471 0.036006489 -4.795599271 1.95E-05 0.000150139 Down 3.314309 2.445506 2.178049 0 0.2642054 0 PON65458.1 "Zinc finger, CCHC-type, partial [Trema orientale]" -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9660_c0_g1_i2 10.13308815 20.26617631 0 0 #NAME? 6.93E-07 6.81E-06 Down 3.10328 2.313945 1.751764 0 7.96E-90 3.93E-99 XP_011088284.1 2-hydroxyisoflavanone dehydratase [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9660_c0_g2_i2 8.519892178 17.03978436 0 0 #NAME? 5.54E-06 4.69E-05 Down 2.801334 2.246891 3.57534 3.05E-42 6.95E-58 4.03E-90 XP_011088284.1 2-hydroxyisoflavanone dehydratase [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9661_c0_g1_i2 22.20514607 11.45961824 32.95067389 2.87537274 1.523748987 0.010313802 0.039056846 Up 0.957051 0.4679419 2.028427 2.290077 2.0103 3.884198 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9666_c0_g1_i1 9.253770606 18.50754121 0 0 #NAME? 0.0005218 0.002931866 Down 1.827856 5.959723 1.905859 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9667_c0_g1_i1 11.41563701 1.722273319 21.1090007 12.25647548 3.615472266 0.000131611 0.000851389 Up 0 0 1.165324 4.722576 3.385686 2.898221 XP_012829311.1 PREDICTED: putative late blight resistance protein homolog R1B-17 [Erythranthe guttata] -- -- -- -- -- -- -- -- -- -- -- -- -- S COG4886 leucine Rich Repeat -- -- -- TRINITY_DN9668_c0_g1_i1 5.396687283 0.738117137 10.05525743 13.62284782 3.767956421 0.009473196 0.036442101 Up 0 0 0.46429 0.5277054 2.111576 1.969471 XP_010424125.1 PREDICTED: uncharacterized protein LOC104709166 [Camelina sativa] -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only L COG2801 Retrotransposon protein -- -- -- TRINITY_DN9676_c1_g2_i1 5.81680057 10.53107359 1.102527553 0.104692797 -3.255765903 0.01533805 0.054366373 Down 0.4894611 3.364918 2.309993 0.4917769 0 0 PIN07927.1 hypothetical protein CDL12_19506 [Handroanthus impetiginosus] Q9C6R9|PPR66_ARATH Pentatricopeptide repeat-containing protein At1g31790 OS=Arabidopsis thaliana OX=3702 GN=PCMP-A1 PE=2 SV=1 -- -- -- -- -- -- KOG4197 FOG: PPR repeat [R] POORLY CHARACTERIZED General function prediction only S ENOG410Z7Z7 Pentatricopeptide repeat-containing protein -- -- -- TRINITY_DN9686_c0_g1_i1 9.444399563 18.88879913 0 0 #NAME? 1.92E-06 1.76E-05 Down 3.840461 4.637517 2.230564 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9686_c0_g2_i1 12.1876011 23.28849649 1.086705707 0.046662768 -4.421584303 1.02E-05 8.23E-05 Down 2.111067 2.040134 4.257053 0 0.3483045 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9689_c0_g1_i1 88.1275103 34.89149568 141.3635249 4.051518062 2.018462572 2.59E-12 4.82E-11 Up 7.327927 3.641251 7.288108 22.55945 16.61148 20.77362 XP_022954010.1 uncharacterized protein LOC111456398 [Cucurbita moschata] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG411153R NA -- -- -- TRINITY_DN968_c0_g1_i1 12.08597813 24.17195626 0 0 #NAME? 4.63E-08 5.36E-07 Down 3.574442 2.663679 1.451314 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9691_c0_g1_i1 12.63940968 24.89303102 0.385788347 0.015497845 -6.01178853 1.67E-07 1.78E-06 Down 2.33867 1.98615 2.289978 0 0 0.09808391 ALR74635.1 gibberellin biosynthesis-related protein GA20ox3 [Salvia miltiorrhiza] Q39111|GAOX2_ARATH Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=GA20OX2 PE=2 SV=1 -- -- -- -- -- -- KOG0143 Iron/ascorbate family oxidoreductases [QR] METABOLISM|POORLY CHARACTERIZED "Secondary metabolites biosynthesis, transport and catabolism |General function prediction only " S COG3491 2OGFe(II) oxygenase Biological Process: response to red or far red light (GO:0009639);|Biological Process: gibberellin biosynthetic process (GO:0009686);|Biological Process: response to gibberellin (GO:0009739);|Biological Process: unidimensional cell growth (GO:0009826);|Biological Process: flower development (GO:0009908);|Molecular Function: gibberellin 20-oxidase activity (GO:0045544);|Molecular Function: metal ion binding (GO:0046872);|Molecular Function: dioxygenase activity (GO:0051213);|Biological Process: response to karrikin (GO:0080167); PF03171.19 2OG-Fe(II) oxygenase superfamily TRINITY_DN9702_c0_g1_i2 31.96178097 43.98001686 19.94354508 0.453468336 -1.140926277 0.025837989 0.083436283 Down 5.654301 2.591707 3.774147 1.501905 1.80424 1.012843 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9719_c0_g1_i2 11.6805752 23.36115039 0 0 #NAME? 6.57E-08 7.44E-07 Down 1.539676 2.913517 1.81528 0 0 0 XP_024035651.1 uncharacterized protein LOC112096445 [Citrus clementina] -- -- -- -- -- -- -- -- -- -- -- -- -- S ENOG41114AX NA -- -- -- TRINITY_DN9725_c0_g1_i1 18.83631091 30.6090994 7.063522417 0.230765444 -2.115500891 0.000720574 0.003903692 Down 2.894956 3.471593 4.56019 1.305053 0.2597266 0.5426719 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9732_c0_g1_i1 20.22914467 28.95091503 11.50737432 0.397478778 -1.331050261 0.022213989 0.073775213 Down 3.716302 3.315851 6.77912 2.317918 0.7661454 1.20917 XP_011069978.1 protein PLANT CADMIUM RESISTANCE 10 [Sesamum indicum] B4FF80|CNR5_MAIZE Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1 -- -- -- -- -- -- -- -- -- -- -- S ENOG410XX4J Protein PLANT CADMIUM RESISTANCE Cellular Component: integral component of membrane (GO:0016021); -- -- TRINITY_DN9733_c0_g1_i2 27.97640345 6.061402224 49.89140469 8.231000491 3.041067803 0.003256348 0.014654663 Up 0.777788 0.9331788 1.793868 12.30918 5.342974 4.403296 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9734_c0_g1_i1 19.84136523 38.95825998 0.724470471 0.018596068 -5.748858545 0.000125219 0.000813287 Down 6.634415 2.13928 10.09145 0 0.3288327 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9736_c0_g1_i2 14.65229144 28.21787718 1.086705707 0.038511249 -4.69857626 3.00E-07 3.11E-06 Down 2.367844 1.323221 2.180546 0 0.1634476 1.25E-43 KYP65316.1 Lysine histidine transporter 1 [Cajanus cajan] Q9FKS8|LHT1_ARATH Lysine histidine transporter 1 OS=Arabidopsis thaliana OX=3702 GN=LHT1 PE=1 SV=1 -- -- -- -- -- -- KOG1303 Amino acid transporters [E] METABOLISM Amino acid transport and metabolism E COG0814 amino acid transport Biological Process: amino acid transmembrane transport (GO:0003333);|Cellular Component: plasma membrane (GO:0005886);|Molecular Function: amino acid transmembrane transporter activity (GO:0015171);|Molecular Function: symporter activity (GO:0015293);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: amino acid import (GO:0043090);|Biological Process: response to karrikin (GO:0080167); -- -- TRINITY_DN9751_c0_g1_i1 14.77355007 0.246039046 29.3010611 119.0911021 6.895921816 9.43E-10 1.34E-08 Up 9.22E-55 6.01E-76 0.100604 3.194162 1.967611 1.979882 PIN11370.1 hypothetical protein CDL12_16028 [Handroanthus impetiginosus] P81370|TLP_ACTDE Thaumatin-like protein OS=Actinidia deliciosa OX=3627 GN=tlp PE=1 SV=2 -- -- -- -- -- -- -- -- -- -- -- S ENOG410YD4X thaumatin-like protein Cellular Component: extracellular region (GO:0005576);|Biological Process: killing of cells of other organism (GO:0031640);|Biological Process: defense response to fungus (GO:0050832); PF00314.16 Thaumatin family TRINITY_DN9762_c0_g1_i1 15.69408771 23.9416813 7.44649413 0.311026366 -1.684891211 0.01297008 0.047365313 Down 0.8182549 1.040079 0.9971045 0.2339675 0.2025403 0.2673537 XP_011080855.1 laccase-4 [Sesamum indicum] Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana OX=3702 GN=LAC16 PE=2 SV=2 sind:105164010 K05909 E1.10.3.2 laccase -- -- KOG1263 Multicopper oxidases [Q] METABOLISM "Secondary metabolites biosynthesis, transport and catabolism " Q COG2132 Multicopper oxidase "Molecular Function: copper ion binding (GO:0005507);|Molecular Function: oxidoreductase activity, oxidizing metal ions (GO:0016722);|Biological Process: lignin catabolic process (GO:0046274);|Cellular Component: apoplast (GO:0048046);|Molecular Function: hydroquinone:oxygen oxidoreductase activity (GO:0052716);" "PF07731.13,PF00394.21,PF07732.14" Multicopper oxidase|Multicopper oxidase|Multicopper oxidase TRINITY_DN9767_c0_g1_i1 5.679706601 10.99190402 0.367509184 0.033434534 -4.902517197 0.002055866 0.009868027 Down 1.494324 0.8524427 1.237203 0.1178375 0 0 XP_012836236.1 PREDICTED: uncharacterized protein LOC105956874 [Erythranthe guttata] P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1 -- -- -- -- -- -- KOG1075 FOG: Reverse transcriptase [R] POORLY CHARACTERIZED General function prediction only S ENOG410Y65V Retrotransposon protein Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);|Molecular Function: metal ion binding (GO:0046872); -- -- TRINITY_DN9780_c0_g1_i2 30.8926879 20.50293217 41.28244363 2.013489743 1.009698123 0.030927736 0.096601028 Up 1.749288 0.6288646 1.400888 1.80469 2.042933 2.174721 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9782_c0_g1_i1 16.42757018 24.65007476 8.20506561 0.332861693 -1.587005247 0.017369539 0.060178253 Down 3.135623 5.098955 3.200492 1.256746 0.6231409 1.169676 PIN07844.1 Polygalacturonase [Handroanthus impetiginosus] -- -- -- -- -- -- -- -- -- -- -- -- -- M COG5434 Glycoside hydrolase family 28 -- -- -- TRINITY_DN9783_c0_g1_i1 19.99260639 33.53648586 6.44872692 0.192289882 -2.37864524 0.000111875 0.000734292 Down 4.76381 8.104443 7.363868 1.141431 0 2.117376 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9790_c0_g1_i1 47.30131407 7.39089225 87.21173588 11.79989275 3.560701842 3.10E-16 7.85E-15 Up 0.3167329 0.07662793 0.301757 2.358823 2.304773 2.135757 XP_021628388.1 uncharacterized protein LOC110626658 [Manihot esculenta] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- "PF08284.10,PF13975.5,PF13650.5" Retroviral aspartyl protease|gag-polyprotein putative aspartyl protease|Aspartyl protease TRINITY_DN9792_c0_g1_i1 7.371171398 13.27230606 1.470036737 0.110759708 -3.174494946 0.005046586 0.021355231 Down 2.413478 1.58389 3.15299 0.7040184 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9797_c0_g1_i1 47.74540423 69.92141537 25.56939309 0.365687579 -1.451316471 0.043762227 0.127490777 Down 15.15116 9.988373 7.077656 6.901546 0.6997728 1.905267 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9824_c0_g1_i1 9.115142631 15.21709514 3.013190124 0.198013491 -2.336329371 0.013637603 0.049368553 Down 3.159867 2.649165 2.569375 0.6458506 0 0.6397804 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9825_c0_g1_i1 12.42148122 23.37046839 1.472494053 0.063006613 -3.988352936 1.99E-05 0.000152759 Down 5.345277 3.371704 3.259833 0 0.3812788 0.2166947 XP_022843812.1 uncharacterized protein LOC111367263 isoform X2 [Olea europaea var. sylvestris] -- -- -- -- -- -- -- -- -- -- -- -- -- T COG0589 Universal stress protein -- PF00582.25 Universal stress protein family TRINITY_DN9833_c0_g1_i2 19.50917264 10.97570223 28.04264305 2.55497484 1.353309085 0.01796939 0.061967979 Up 1.607734 1.482073 0.5869859 2.199373 1.922132 3.293506 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9833_c0_g2_i1 20.11436219 39.493706 0.735018369 0.018611025 -5.747698639 4.96E-11 8.18E-10 Down 4.932783 2.643801 3.470339 0.1243775 1.49E-68 3.96E-21 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9837_c0_g1_i2 40.47149954 74.29163475 6.651364326 0.089530461 -3.481477571 3.12E-13 6.29E-12 Down 1.731766 2.066342 2.088682 0.1627382 0.1598743 0.1066367 XP_021746736.1 uncharacterized protein LOC110712575 [Chenopodium quinoa] -- -- -- -- -- -- -- -- -- -- -- -- -- L COG2801 Retrotransposon protein -- PF03078.14 ATHILA ORF-1 family TRINITY_DN9837_c0_g2_i1 5.813243824 11.62648765 0 0 #NAME? 0.00053784 0.003011863 Down 0.7699777 3.34895 1.773178 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9840_c0_g1_i1 1518.40699 911.1853688 2125.628612 2.332816883 1.222073066 2.39E-29 1.31E-27 Up 62.17238 92.54741 82.94584 149.4699 152.2948 145.4192 XP_012855601.1 PREDICTED: miraculin-like [Erythranthe guttata] P80691|LSPI_CARPA Latex serine proteinase inhibitor OS=Carica papaya OX=3649 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YHN1 trypsin and protease inhibitor family protein Kunitz family protein Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867);|Cellular Component: extracellular space (GO:0005615); PF00197.17 Trypsin and protease inhibitor TRINITY_DN9840_c0_g2_i1 7403.639766 4117.953253 10689.32628 2.595786213 1.376171569 4.07E-113 1.24E-110 Up 343.1619 345.0954 336.061 718.5621 724.9703 701.7359 XP_012855601.1 PREDICTED: miraculin-like [Erythranthe guttata] P80691|LSPI_CARPA Latex serine proteinase inhibitor OS=Carica papaya OX=3649 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O ENOG410YHN1 trypsin and protease inhibitor family protein Kunitz family protein Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867);|Cellular Component: extracellular space (GO:0005615); PF00197.17 Trypsin and protease inhibitor TRINITY_DN9841_c0_g2_i1 6.234854718 10.65853326 1.811176178 0.169927337 -2.557010127 0.03108084 0.097025828 Down 0.6755943 2.611554 2.577548 0 0.8172527 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9846_c0_g1_i1 11.26904638 18.80570612 3.732386646 0.198470965 -2.333000127 0.005205257 0.021916543 Down 1.213763 1.816893 1.929789 0.2098998 0.206448 0.3398643 ALA55540.1 4-coumarate CoA ligase [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9848_c0_g1_i1 11.83206012 19.96829191 3.695828322 0.18508485 -2.433741283 0.002918949 0.013348765 Down 1.218092 3.478327 3.497378 0.6103178 0.3095659 0.3212039 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9849_c0_g1_i1 16.10026967 5.904937095 26.29560224 4.453155354 2.154827943 0.003789019 0.016701779 Up 0 0 3.064598 4.445496 3.714365 2.983548 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9851_c0_g1_i1 7.842869331 14.22097587 1.464762789 0.10300016 -3.279281518 0.003615694 0.016043715 Down 2.836239 1.28256 1.50682 0.3096028 0.1660748 3.05E-23 XP_010905139.1 PREDICTED: adenosylhomocysteinase-like [Elaeis guineensis] P35007|SAHH_CATRO Adenosylhomocysteinase OS=Catharanthus roseus OX=4058 GN=SAHH PE=2 SV=1 pda:103696915 K01251 "E3.3.1.1, ahcY" adenosylhomocysteinase ko00270 Cysteine and methionine metabolism KOG1370 S-adenosylhomocysteine hydrolase [H] METABOLISM Coenzyme transport and metabolism H COG0499 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (By similarity) Molecular Function: adenosylhomocysteinase activity (GO:0004013);|Biological Process: one-carbon metabolic process (GO:0006730);|Biological Process: S-adenosylhomocysteine catabolic process (GO:0019510);|Molecular Function: NAD binding (GO:0051287); -- -- TRINITY_DN9852_c0_g1_i1 4.100411353 8.200822707 0 0 #NAME? 0.003270945 0.014708075 Down 0.3574778 1.781821 2.560156 0 0 0 PIN13343.1 Serine/threonine protein kinase [Handroanthus impetiginosus] Q8RY67|WAKLO_ARATH Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana OX=3702 GN=WAKL14 PE=2 SV=2 -- -- -- -- -- -- KOG1187 Serine/threonine protein kinase [T] CELLULAR PROCESSES AND SIGNALING Signal transduction mechanisms C COG0221 Pyrophosphate phospho-hydrolase -- PF07714.16 Protein tyrosine kinase TRINITY_DN9867_c0_g1_i1 14.07044786 23.36890959 4.771986131 0.204202345 -2.291928663 0.00261892 0.012152999 Down 2.990027 2.867052 2.10054 0.2627011 0.7965324 0.2661676 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9869_c0_g1_i1 661.4498113 1321.04134 1.8582824 0.00140668 -9.473490137 0 0 Down 79.13669 77.54171 76.46519 1.72E-24 0.1612954 0.08712629 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9869_c1_g2_i1 21.38817896 30.73696195 12.03939597 0.39169115 -1.352211564 0.01656517 0.057899652 Down 3.519503 6.593187 4.769056 1.296901 0.7754909 2.533107 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN986_c0_g1_i1 19.51896002 39.03792004 0 0 #NAME? 6.01E-09 7.79E-08 Down 3.621694 5.637765 2.213069 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9871_c0_g1_i1 12.95072365 23.64155471 2.259892593 0.095589847 -3.386998801 6.67E-05 0.000459441 Down 2.421107 4.352288 3.526373 0.4415785 0 0.4498466 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9892_c0_g1_i1 650.4674915 0 1300.934983 Inf Inf 0 0 Up 0 0 0 86.66502 91.98943 86.44611 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9896_c0_g1_i1 114.9044592 0 229.8089184 Inf Inf 3.91E-73 6.99E-71 Up 0 0 0 43.94172 32.65608 39.25788 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9900_c0_g1_i1 24.58237458 33.8806986 15.28405056 0.451113796 -1.148436688 0.032057843 0.099575864 Down 1.777853 1.829505 1.360736 0.6565612 0.4623439 0.6860132 XP_011071248.1 subtilisin-like protease SBT1.7 [Sesamum indicum] O65351|SBT17_ARATH Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana OX=3702 GN=SBT1.7 PE=1 SV=1 -- -- -- -- -- -- -- -- -- -- -- O COG1404 "peptidase (S8 and S53, subtilisin, kexin, sedolisin" Molecular Function: serine-type endopeptidase activity (GO:0004252);|Cellular Component: extracellular region (GO:0005576);|Cellular Component: cell wall (GO:0005618);|Cellular Component: plant-type cell wall (GO:0009505);|Biological Process: seed coat development (GO:0010214);|Cellular Component: apoplast (GO:0048046);|Biological Process: mucilage metabolic process involved in seed coat development (GO:0048359);|Biological Process: mucilage extrusion from seed coat (GO:0080001); "PF00082.21,PF02225.21" Subtilase family|PA domain TRINITY_DN9903_c0_g1_i1 17.5113542 32.8176533 2.205055106 0.067191127 -3.895585464 1.88E-05 0.000145079 Down 1.859999 5.019069 4.089613 0.5658721 1.65E-63 3.30E-09 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9905_c0_g1_i2 168.6706981 311.1087221 26.23267417 0.084319957 -3.567982053 3.89E-23 1.54E-21 Down 50.51958 72.52866 52.96199 4.399817 4.815296 2.874199 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9910_c0_g1_i1 13.60090292 4.573204868 22.62860098 4.948083812 2.306869937 0.002183935 0.010378492 Up 0.9514967 0 0.7243109 2.601278 1.985642 1.952388 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9911_c0_g1_i1 14.20668954 4.672061962 23.74131711 5.081550139 2.345268662 0.001811624 0.008817824 Up 0.3037689 0.6110773 0.937585 2.455886 2.753682 2.403292 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9914_c0_g1_i1 11.40125252 5.295120213 17.50738482 3.306324336 1.725228254 0.023774446 0.077932373 Up 1.208008 0.7866949 0.1549812 2.301141 1.26109 1.967158 BAT83763.1 "hypothetical protein VIGAN_04098100, partial [Vigna angularis var. angularis]" -- -- -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S COG0666 Ankyrin Repeat -- "PF13961.5,PF14223.5" Domain of unknown function (DUF4219)|gag-polypeptide of LTR copia-type TRINITY_DN9918_c0_g1_i1 13.63285771 25.09230401 2.173411413 0.086616654 -3.529211749 2.84E-05 0.000211174 Down 3.695624 4.955431 5.400327 0 0.9342737 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9920_c0_g1_i1 11.18621328 20.44348482 1.928941734 0.09435484 -3.40575967 0.00043356 0.002487747 Down 5.317981 4.480307 1.79662 0 0 0.8449706 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9923_c0_g1_i1 1658.494271 3316.988542 0 0 #NAME? 0 0 Down 124.0216 123.1044 116.1521 0 0 0 XP_020534347.1 uncharacterized protein LOC110009312 [Jatropha curcas] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- PF01107.17 Viral movement protein (MP) TRINITY_DN9931_c0_g1_i1 26.47268224 41.94029405 11.00507043 0.262398504 -1.930168598 0.025401567 0.082272804 Down 10.87048 5.98143 3.750089 1.488366 0 2.953609 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9933_c0_g1_i1 12.5492522 25.0985044 0 0 #NAME? 1.72E-08 2.10E-07 Down 2.605897 2.858514 3.025043 0 0 0 XP_011091180.1 probable carboxylesterase 8 [Sesamum indicum] -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9935_c0_g1_i1 100.6742484 135.0545201 66.2939767 0.490868256 -1.026592224 6.35E-05 0.000438973 Down 13.44622 14.65225 15.11875 5.953915 4.823722 6.345955 EEF50877.1 "DNA binding protein, putative [Ricinus communis]" Q58FS3|RAD_ANTMA Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1 -- -- -- -- -- -- KOG0724 "Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains" [O] CELLULAR PROCESSES AND SIGNALING "Posttranslational modification, protein turnover, chaperones " K ENOG410YUEI Myb-like DNA-binding domain Molecular Function: DNA binding (GO:0003677);|Cellular Component: nucleus (GO:0005634);|Biological Process: flower development (GO:0009908);|Biological Process: determination of dorsal/ventral asymmetry (GO:0048262); -- -- TRINITY_DN9936_c0_g1_i1 28.33860751 7.409055726 49.26815929 6.649721788 2.733293982 1.52E-07 1.63E-06 Up 0.9608814 0.6158172 0.6077469 4.848591 3.812067 3.230453 PIN23399.1 putative membrane protein [Handroanthus impetiginosus] Q9FKY4|PILS7_ARATH Protein PIN-LIKES 7 OS=Arabidopsis thaliana OX=3702 GN=PILS7 PE=2 SV=1 sind:105176005 K07088 K07088 uncharacterized protein -- -- KOG2722 Predicted membrane protein [S] POORLY CHARACTERIZED Function unknown S COG0679 Auxin Efflux Carrier Cellular Component: endoplasmic reticulum membrane (GO:0005789);|Biological Process: response to auxin (GO:0009733);|Biological Process: auxin-activated signaling pathway (GO:0009734);|Cellular Component: integral component of membrane (GO:0016021);|Biological Process: transmembrane transport (GO:0055085); PF03547.17 Membrane transport protein TRINITY_DN9952_c0_g1_i1 26.23814487 52.47628975 0 0 #NAME? 4.73E-17 1.27E-15 Down 6.057103 5.823156 6.00212 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- TRINITY_DN9956_c0_g1_i1 9.264239459 14.90612656 3.622352355 0.243010975 -2.040906622 0.026521737 0.08525005 Down 1.782369 2.310284 3.221069 0 1.405201 0 PIN22465.1 Ubiquitin--protein ligase [Handroanthus impetiginosus] E4NKF8|PUB1_MEDTR U-box domain-containing protein 1 OS=Medicago truncatula OX=3880 GN=PUB1 PE=1 SV=1 -- -- -- -- -- -- KOG0167 FOG: Armadillo/beta-catenin-like repeats [S] POORLY CHARACTERIZED Function unknown S ENOG410XQT6 Ubox domain-containing protein Biological Process: response to molecule of bacterial origin (GO:0002237);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to symbiotic bacterium (GO:0009609);|Biological Process: response to symbiotic fungus (GO:0009610);|Biological Process: nodulation (GO:0009877);|Biological Process: arbuscular mycorrhizal association (GO:0036377);|Molecular Function: ubiquitin protein ligase activity (GO:0061630); PF00514.22 Armadillo/beta-catenin-like repeat TRINITY_DN9970_c0_g1_i4 34.05587309 67.34016948 0.771576693 0.011457897 -6.447513977 8.23E-08 9.18E-07 Down 3.948673 4.353717 9.045 3.59E-44 1.51E-48 0.1352702 AAO12275.1 "plasma membrane MIP protein, partial [Axonopus compressus]" Q9XF59|PIP12_MAIZE Aquaporin PIP1-2 OS=Zea mays OX=4577 GN=PIP1-2 PE=1 SV=1 sind:105172689 K09872 PIP aquaporin PIP -- -- KOG0223 Aquaporin (major intrinsic protein family) [G] METABOLISM Carbohydrate transport and metabolism G COG0580 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity) Cellular Component: vacuole (GO:0005773);|Cellular Component: endoplasmic reticulum (GO:0005783);|Cellular Component: cytosol (GO:0005829);|Cellular Component: plasma membrane (GO:0005886);|Biological Process: response to water deprivation (GO:0009414);|Cellular Component: plasmodesma (GO:0009506);|Molecular Function: water channel activity (GO:0015250);|Cellular Component: integral component of membrane (GO:0016021);|Cellular Component: protein-containing complex (GO:0032991);|Biological Process: protein homotetramerization (GO:0051289);|Biological Process: protein heterotetramerization (GO:0051290); -- -- TRINITY_DN9981_c0_g1_i1 14.38743884 1.476234274 27.2986434 18.49208075 4.208835663 1.44E-06 1.34E-05 Up 0 0 0.3937285 2.289743 2.07277 1.103406 CAN61630.1 hypothetical protein VITISV_003191 [Vitis vinifera] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); -- -- TRINITY_DN9981_c1_g1_i1 11.78222044 0.738117137 22.82632375 30.92506949 4.950704932 0.000456694 0.002605016 Up 0 0 0.2573641 3.934686 2.291134 1.038831 KZV56298.1 hypothetical protein F511_00295 [Dorcoceras hygrometricum] P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 -- -- -- -- -- -- KOG0017 "FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations" [R] POORLY CHARACTERIZED General function prediction only S ENOG410XS4D Retrotransposon protein Cellular Component: retrotransposon nucleocapsid (GO:0000943);|Molecular Function: nucleic acid binding (GO:0003676);|Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);|Molecular Function: aspartic-type endopeptidase activity (GO:0004190);|Molecular Function: endonuclease activity (GO:0004519);|Molecular Function: zinc ion binding (GO:0008270);|Biological Process: DNA integration (GO:0015074); PF00665.25 Integrase core domain TRINITY_DN9999_c0_g1_i1 4.522217517 9.044435034 0 0 #NAME? 0.002071149 0.00992694 Down 1.726593 1.008664 1.286129 0 0 0 -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --