index,Unassigned;__;__;__;__;__;__,d__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobrevibacter;__,d__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobrevibacter;s__Methanobrevibacter_ruminantium,d__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobrevibacter;s__Methanobrevibacter_wolinii,d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__Methanomassiliicoccales;f__Methanomethylophilaceae;g__uncultured;__,d__Bacteria;__;__;__;__;__;__,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;__,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Arcanobacterium;s__uncultured_bacterium,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Flaviflexus;s__uncultured_bacterium,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Mobiluncus;__,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Trueperella;s__Trueperella_pyogenes,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;__,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;__,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium_maris,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium_urealyticum,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Corynebacteriales;f__Dietziaceae;g__Dietzia;__,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;__,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Kocuria;__,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Micrococcales;f__Promicromonosporaceae;g__Cellulosimicrobium;__,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Propionibacterium;__,d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Tessaracoccus;__,d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;__;__;__,d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Atopobium;__,d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olsenella;__,d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olsenella;s__uncultured_bacterium,d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__uncultured;s__uncultured_bacterium,d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriaceae;g__Collinsella;__,d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriales_Incertae_Sedis;g__Phoenicibacter;s__uncultured_bacterium,d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Eggerthellaceae;__;__,d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Eggerthellaceae;g__DNF00809;s__Coriobacteriaceae_bacterium,d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Eggerthellaceae;g__Denitrobacterium;s__Eggerthellaceae_bacterium,d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Eggerthellaceae;g__Enterorhabdus;s__uncultured_bacterium,d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Eggerthellaceae;g__uncultured;s__uncultured_bacterium,d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__uncultured;g__uncultured;s__uncultured_bacterium,d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;__;__;__,d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;__,d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides_coprophilus,d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides_eggerthii,d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides_plebeius,d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__uncultured_bacterium,d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidales_BS11_gut_group;g__Bacteroidales_BS11_gut_group;s__uncultured_bacterium,d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidales_RF16_group;g__Bacteroidales_RF16_group;__,d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidales_RF16_group;g__Bacteroidales_RF16_group;s__uncultured_bacterium,d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidale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ospiraceae;g__[Ruminococcus]_gauvreauii_group;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__[Ruminococcus]_torques_group;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__uncultured;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Monoglobales;f__Monoglobaceae;g__Monoglobus;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Monoglobales;f__Monoglobaceae;g__Monoglobus;s__uncultured_bacterium,d__Bacteria;p__Firmicutes;c__Clostridia;o__Monoglobales;f__Monoglobaceae;g__Monoglobus;s__uncultured_rumen,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;__;__;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Butyricicoccaceae;__;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Butyricicoccaceae;g__UCG-008;s__uncultured_bacterium,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Butyricicoccaceae;g__UCG-009;s__uncultured_bacterium,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Butyricicoccaceae;g__uncultured;s__uncultured_bacterium,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;__;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Colidextribacter;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Colidextribacter;s__uncultured_Clostridia,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__NK4A214_group;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__NK4A214_group;s__metagenome,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__NK4A214_group;s__uncultured_Lachnospiraceae,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Oscillibacter;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Oscillibacter;s__uncultured_bacterium,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Oscillospira;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Oscillospira;s__uncultured_bacterium,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Oscillospiraceae;s__uncultured_rumen,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__UCG-002;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__UCG-002;s__uncultured_bacterium,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__UCG-002;s__uncultured_rumen,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__UCG-005;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__UCG-005;s__human_gut,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__UCG-005;s__uncultured_bacterium,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__UCG-005;s__uncultured_organism,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__UCG-005;s__uncultured_rumen,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__uncultured;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Oscillospirales;g__Hydrogenoanaerobacterium;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;__;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Candidatus_Soleaferrea;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Candidatus_Soleaferrea;s__uncultured_bacterium,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Candidatus_Soleaferrea;s__uncultured_rumen,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Fournierella;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Fournierella;s__uncultured_bacterium,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Fournierella;s__uncultured_organism,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Incertae_Sedis;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcaceae;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcus;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus_champanellensis,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus_flavefaciens,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcus;s__bacterium_YRD2003,d__Bacteria;p__Firmicutes;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Subdoligranulum;__,d__Bacteria;p__Firmicutes;c__Clostridia;o__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teobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Comamonadaceae;__;__,d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;__;__,d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;__;__,d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;__;__,d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia-Shigella;__,d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;__;__,d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Gallibacterium;s__Gallibacterium_anatis,d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;__,d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter;__,d__Bacteria;p__SAR324_clade(Marine_group_B);c__SAR324_clade(Marine_group_B);o__SAR324_clade(Marine_group_B);f__SAR324_clade(Marine_group_B);g__SAR324_clade(Marine_group_B);__,d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Sphaerochaeta;s__uncultured_bacterium,d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Sphaerochaeta;s__uncultured_prokaryote,d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;__,d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema_berlinense,d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema_pectinovorum,d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema_porcinum,d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema_succinifaciens,d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__gut_metagenome,d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__uncultured_bacterium,d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__unidentified_rumen,d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Cloacibacillus;__,d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Cloacibacillus;s__Cloacibacillus_porcorum,d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Pyramidobacter;s__uncultured_Pyramidobacter,d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Pyramidobacter;s__uncultured_bacterium,d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__uncultured;__,d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__uncultured;s__uncultured_bacterium,d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__WCHB1-41;f__WCHB1-41;g__WCHB1-41;__,d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__WCHB1-41;f__WCHB1-41;g__WCHB1-41;s__uncultured_bacterium,d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__WCHB1-41;f__WCHB1-41;g__WCHB1-41;s__uncultured_rumen,d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__WCHB1-41;f__WCHB1-41;g__WCHB1-41;s__unidentified_rumen,d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Verrucomicrobiales;f__Akkermansiaceae;g__Akkermansia;__,d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Verrucomicrobiales;f__Akkermansiaceae;g__Akkermansia;s__uncultured_bacterium,d__Bacteria;p__WPS-2;c__WPS-2;o__WPS-2;f__WPS-2;g__WPS-2;s__uncultured_rumen,d__Eukaryota;__;__;__;__;__;__,BarcodeSequence,Group,Status,SampleType,Farm,Description
802.283,17,2633,42,0,0,0,10,12,0,0,0,127,0,0,0,0,0,0,0,0,0,0,0,0,0,10,0,5,17,0,0,0,249,208,60,31,0,0,0,0,0,0,0,0,32,0,0,0,0,147,132,0,0,0,0,0,0,0,0,103,0,0,0,0,0,41,0,15,11,48,809,18,0,0,0,0,0,0,0,9,0,0,298,19,0,6,0,0,23,363,85,0,0,0,0,0,15,0,0,0,0,4,0,0,25,0,0,0,20,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,8,0,0,0,12,0,883,7,0,64,0,0,0,0,0,0,0,7309,0,127,0,0,0,0,1340,0,6,0,0,0,0,0,0,0,98,27,1664,0,152,0,190,0,0,9,0,11,458,0,0,0,0,0,0,611,71,0,3,8,1531,14,0,0,0,0,17,0,0,0,41,0,30,0,0,6,56,0,0,243,0,0,0,0,19,1270,0,0,0,0,0,0,50,0,21,0,0,0,12,0,0,0,5,17,12,0,188,0,0,359,0,0,0,0,0,88,0,381,0,0,409,52,0,0,0,105,0,188,0,52,0,0,0,0,0,0,0,206,0,141,19,0,0,0,0,19,117,0,0,0,100,0,0,200,0,0,60,18,0,0,0,28,0,0,0,0,0,172,346,0,0,28,0,10,0,0,17,0,0,0,0,531,185,125,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,17,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57,0,0,0,0,0,0,6,0,0,0,221,0,0,0,0,0,0,0,53,0,0,39,0,0,186,333,0,0,0,0,0,0,0,0,0,0,0,86,0,0,CGCAGACCGCAT,FS_Cull_1,Cull,Fecal swab,Farm 1,Cull rectal swab of farm 1
802.284,10,232,0,0,0,0,0,0,0,0,0,118,0,0,0,0,0,0,0,0,0,0,0,0,0,14,0,0,16,0,0,0,84,139,21,0,0,0,0,0,0,0,0,0,0,0,0,0,0,69,81,0,0,0,0,0,0,0,0,55,0,0,0,0,0,0,0,0,0,18,229,0,0,0,0,0,0,0,0,0,0,0,101,0,8,0,0,0,15,246,20,0,0,0,0,0,0,0,0,0,0,0,0,0,15,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,272,0,0,13,0,0,0,0,0,0,0,6163,0,0,0,0,0,0,247,0,0,0,0,0,0,0,0,0,43,0,798,0,76,0,135,0,0,0,0,0,89,0,0,0,0,0,0,173,0,0,0,0,578,11,0,6,0,0,0,0,0,0,26,0,0,0,0,0,0,0,0,69,0,0,0,0,0,421,0,0,0,0,0,0,0,0,12,0,0,0,0,0,0,8,0,0,12,0,82,0,0,244,0,0,0,0,0,21,0,217,0,0,200,38,0,0,0,60,0,28,0,8,0,0,0,0,0,0,0,63,0,61,0,0,0,0,0,0,29,0,0,24,15,0,0,90,0,0,0,0,12,0,0,0,0,0,0,0,0,47,101,0,0,0,0,0,0,0,0,0,0,0,0,124,65,40,0,0,0,0,0,0,0,0,0,5,0,23,0,10,0,10,0,0,0,0,0,0,0,0,0,0,0,11,0,0,50,8,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16,0,4,10,0,0,124,150,0,0,0,0,0,0,0,0,0,0,0,65,0,0,CGCGTGCCGCAT,FS_Cull_1,Cull,Fecal swab,Farm 1,Cull rectal swab of farm 1
802.285,29,336,0,12,0,0,11,0,0,0,0,62,0,0,0,0,0,0,0,0,0,0,0,0,0,13,0,9,0,0,0,24,145,212,36,38,0,0,0,0,0,0,0,0,20,0,0,0,6,165,232,0,0,0,0,0,15,12,20,167,0,0,0,0,22,84,0,68,27,33,988,17,9,0,0,0,0,0,0,0,0,55,426,25,17,14,0,0,43,271,53,0,0,0,6,0,54,0,0,0,0,0,0,0,31,0,0,0,0,0,16,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0,406,10,0,56,0,0,0,0,0,0,0,5008,0,28,31,0,0,0,309,0,0,0,0,0,0,0,0,0,50,0,1303,0,152,0,280,0,0,0,0,0,332,0,0,0,0,0,0,282,29,0,0,0,1526,22,0,0,0,0,0,0,0,8,0,39,56,0,0,0,61,0,0,178,0,0,0,7,21,1510,0,0,0,0,0,0,76,0,0,0,0,0,87,0,0,3,0,38,19,0,184,0,0,417,0,0,0,0,0,82,0,283,0,0,253,45,0,0,0,96,0,129,0,33,4,0,0,0,0,23,0,228,0,169,0,0,12,0,0,41,10,5,0,33,92,0,0,212,0,0,83,0,0,0,0,27,0,0,5,0,0,120,441,0,0,30,0,0,0,0,10,0,0,0,0,263,176,36,0,0,0,0,0,0,0,0,0,0,0,67,0,0,0,38,0,0,0,0,0,0,0,0,0,3,0,0,0,0,49,6,0,0,23,0,0,30,0,0,0,216,0,0,0,0,0,0,0,80,0,0,21,0,0,143,587,0,0,0,0,5,0,0,0,5,0,0,25,0,2,CGGTCCCCGCAT,FS_Healthy_1,Healthy,Fecal swab,Farm 1,Healthy rectal swab of farm 1
802.286,82,833,0,19,3,0,40,0,0,0,0,137,36,0,0,0,0,0,0,0,0,0,0,0,0,19,0,0,55,0,0,0,337,313,154,162,0,0,39,0,0,0,0,0,41,0,0,0,58,299,632,7,0,0,0,0,47,18,36,353,0,0,0,0,46,213,0,170,40,95,2522,55,11,0,0,0,0,0,0,48,0,110,895,42,36,39,0,0,161,640,212,0,0,0,20,0,119,0,0,0,0,41,18,0,69,0,0,12,24,0,0,0,0,0,0,0,9,8,17,0,0,0,0,0,0,0,0,0,22,0,0,0,20,0,857,29,0,140,0,0,0,0,0,0,0,9369,0,94,0,0,0,0,617,0,12,0,0,0,0,0,0,0,299,0,2290,15,298,0,559,0,0,0,0,0,757,0,29,0,0,0,0,531,44,7,0,0,3013,37,0,0,0,0,0,14,0,34,76,0,20,0,0,0,104,0,0,334,0,62,0,0,25,2020,0,13,5,0,0,0,89,31,0,0,0,0,59,0,0,68,0,59,29,0,513,0,3,850,67,0,0,22,0,194,0,577,0,0,629,75,0,0,0,146,0,239,0,82,0,0,0,0,0,58,0,413,0,372,0,16,0,0,36,87,58,0,0,59,209,0,0,477,0,0,176,43,0,0,0,44,0,0,17,0,0,201,722,0,0,58,0,0,0,0,14,0,0,0,0,526,143,127,0,0,0,0,0,0,3,0,0,9,0,180,0,0,8,34,0,0,0,0,0,0,0,0,0,0,0,0,0,0,94,0,0,3,38,0,0,76,0,0,0,477,0,0,0,0,0,25,11,284,7,0,43,0,20,398,1078,0,0,0,0,0,0,0,0,0,5,0,39,0,15,CGTGATCCGCAT,FS_Healthy_1,Healthy,Fecal swab,Farm 1,Healthy rectal swab of farm 1
802.287,7,1036,0,0,0,8,4,0,0,0,0,80,43,0,0,0,0,0,0,0,0,0,0,0,18,35,0,0,34,0,0,0,125,184,90,51,0,0,9,0,0,0,8,0,108,0,0,0,65,139,405,5,0,0,0,0,64,27,33,360,0,0,0,0,54,258,0,43,28,109,1890,50,23,0,0,0,0,0,0,84,8,97,615,56,44,51,0,0,106,1044,430,21,0,0,0,0,0,0,0,0,0,15,7,0,67,0,0,0,243,7,38,6,0,0,8,2,0,0,0,0,0,0,0,0,0,0,4,0,6,0,0,0,4,0,469,12,0,41,0,0,0,0,0,0,14,1218,0,35,0,0,0,0,559,0,28,0,0,0,0,0,0,0,169,26,1344,0,159,68,179,0,28,14,0,0,776,7,46,25,0,9,0,530,39,0,0,0,2933,8,0,9,0,0,0,0,0,22,36,0,46,0,0,6,24,0,0,318,0,74,0,0,0,560,0,0,0,0,0,0,39,0,19,0,0,0,106,41,27,27,0,28,44,0,520,0,0,895,34,0,0,0,22,209,0,530,0,0,525,56,0,0,0,141,0,167,0,120,11,0,0,0,0,30,20,328,0,0,0,0,0,0,94,92,110,0,8,0,161,43,18,340,0,63,0,160,64,23,0,9,16,0,0,0,0,131,272,0,68,70,0,0,0,0,33,0,0,0,0,174,130,123,0,0,0,0,0,0,0,0,0,11,126,288,0,17,0,138,0,0,8,0,0,0,0,0,0,12,5,0,0,0,0,0,0,0,0,0,33,157,5,0,0,505,0,0,0,0,0,44,10,404,13,14,108,0,9,760,1053,0,9,0,0,0,0,0,0,9,0,0,104,0,0,CAGGCATCGCCA,FS_Clinical_1,Clinical,Fecal swab,Farm 1,Clinical rectal swab of farm 1
802.288,6,1463,0,29,0,0,0,0,0,0,0,216,0,0,0,0,0,0,0,0,0,6,0,0,18,25,0,0,50,0,0,0,180,167,42,35,0,0,0,0,0,0,0,0,13,0,0,0,0,189,159,0,0,0,0,0,19,13,4,148,0,0,0,0,15,105,0,26,17,83,437,4,0,0,0,0,0,0,0,12,0,0,194,15,0,22,0,0,36,392,91,0,0,0,0,0,207,0,0,0,0,26,0,0,33,0,0,0,8,0,0,0,57,0,3,0,0,76,64,0,0,0,0,0,9,0,0,0,7,0,0,0,15,0,1372,6,0,54,0,0,0,0,0,7,0,4235,0,146,0,0,0,0,372,0,0,0,0,3,0,0,0,0,56,62,932,0,40,0,83,0,0,0,0,0,364,0,0,0,0,0,0,861,51,0,0,7,1303,31,0,0,0,0,20,0,0,13,71,0,0,0,15,0,98,0,0,321,0,0,0,0,0,878,0,0,6,0,0,0,73,0,19,0,0,0,0,47,0,9,0,12,0,0,11,0,0,397,0,0,0,0,0,75,0,135,0,0,296,34,0,0,0,57,0,90,0,31,0,0,0,0,0,0,0,83,0,0,0,0,0,0,0,26,40,0,0,0,25,37,0,152,0,0,0,0,0,11,0,69,6,0,0,0,0,95,362,46,0,27,0,0,0,13,22,0,0,0,0,764,516,247,0,0,0,0,0,0,0,0,0,19,111,66,0,8,0,179,0,0,20,0,0,0,0,0,0,7,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,2340,0,0,0,0,0,0,0,37,0,0,54,0,9,285,182,0,0,0,0,0,0,0,0,0,0,0,17,0,0,CATACTTCGCCA,FS_Clinical_1,Clinical,Fecal swab,Farm 1,Clinical rectal swab of farm 1
802.289,0,375,0,0,0,0,0,0,0,0,0,20,11,0,0,0,0,0,0,0,0,0,0,0,0,13,0,0,23,0,0,0,100,103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22,31,0,0,0,0,0,0,0,0,28,0,0,0,0,0,0,0,9,0,0,74,0,0,0,0,0,0,0,0,0,0,0,23,0,0,0,0,0,0,120,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7,0,0,0,0,0,0,0,35,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11,0,0,0,0,0,367,0,0,0,0,0,0,0,0,7,0,230,0,0,0,0,0,0,89,0,0,0,0,0,0,0,0,0,0,0,535,0,76,0,151,0,0,0,0,10,46,0,0,0,0,0,0,141,0,0,0,0,512,7,0,0,0,0,6,0,0,0,51,65,50,0,0,0,23,0,0,116,0,0,0,0,0,316,0,0,0,0,0,0,29,0,25,0,0,0,0,0,0,0,0,0,0,0,26,0,0,222,0,0,0,28,0,0,0,227,0,0,231,32,0,0,0,24,0,33,0,16,0,0,0,0,0,4,0,50,0,111,0,0,0,0,0,0,13,0,0,0,19,0,0,62,0,0,0,19,0,0,0,18,0,0,0,0,0,40,180,19,0,11,0,0,0,0,11,0,0,0,0,127,103,50,0,0,0,0,0,0,0,0,0,0,38,0,0,0,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26,0,0,0,0,0,0,0,0,0,0,79,0,0,0,0,0,0,0,2,0,0,0,0,0,12,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,CCTAACTCGCCA,FS_Cull_2,Cull,Fecal swab,Farm 2,Cull rectal swab of farm 2
802.29,0,7799,0,0,0,0,14,0,0,0,0,173,15,0,0,0,0,0,0,0,0,0,0,0,7,30,0,0,59,0,0,0,265,215,16,131,0,0,0,0,0,0,0,0,0,0,0,0,0,91,66,0,0,0,0,0,28,0,3,69,0,0,0,0,0,44,0,27,4,23,394,4,0,0,7,0,0,0,0,8,0,0,111,0,0,0,0,0,34,107,17,0,0,0,0,0,68,0,0,0,0,0,0,0,26,0,0,0,0,0,0,0,96,0,0,0,0,0,0,0,0,0,0,0,13,0,0,0,9,0,0,0,27,0,1202,5,0,52,0,0,0,0,0,0,0,302,0,29,0,0,10,0,729,0,0,0,0,0,0,0,0,0,41,20,834,0,371,0,144,0,0,0,0,0,255,0,0,0,0,0,0,972,124,6,0,0,1202,0,0,0,0,0,14,0,0,0,92,0,65,0,0,13,54,0,0,208,0,0,0,0,0,831,0,0,5,0,0,0,93,0,37,0,0,18,18,0,0,0,0,43,9,0,63,0,0,429,0,0,0,0,22,274,0,314,0,0,534,0,0,0,0,117,0,115,0,47,0,0,0,0,0,0,0,132,0,322,0,0,0,0,27,0,32,0,0,0,55,4,0,206,0,0,0,39,0,0,0,62,14,0,0,0,0,106,448,8,0,29,0,0,0,0,19,0,0,0,0,685,466,206,0,0,0,0,0,0,0,0,0,0,103,49,0,0,0,45,0,0,0,0,0,0,0,0,0,0,0,0,0,0,154,0,0,0,0,0,0,0,0,0,0,123,0,0,0,0,0,0,0,0,5,0,12,0,0,96,168,11,0,0,0,0,10,0,0,0,0,19,51,0,0,CGAGGCTCGCCA,FS_Cull_2,Cull,Fecal swab,Farm 2,Cull rectal swab of farm 2
802.291,4,5159,0,0,0,0,0,0,0,0,0,123,30,0,0,0,0,0,0,0,0,0,0,0,7,34,0,0,117,0,0,0,250,194,5,41,0,0,10,0,0,0,0,0,0,0,0,0,0,31,48,0,0,0,6,0,0,0,0,19,0,0,0,0,0,41,0,10,18,27,294,0,0,0,0,0,0,0,0,33,0,0,141,0,0,6,0,0,25,107,33,0,0,0,0,0,57,0,0,0,0,0,0,0,56,0,0,0,0,0,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3686,12,0,14,0,0,0,0,0,4,0,828,0,71,0,0,0,0,198,0,0,0,0,0,0,0,7,0,3,39,1339,5,85,72,123,0,0,0,0,0,335,0,10,0,0,0,0,2961,371,0,0,0,1136,6,0,0,0,0,49,0,9,0,85,0,0,0,0,0,14,0,0,92,0,0,0,0,0,411,0,0,0,40,0,0,103,0,0,0,0,0,0,0,0,0,0,42,6,0,96,0,0,335,0,0,0,0,0,73,0,308,0,0,286,70,0,0,0,128,0,81,0,35,0,0,0,0,0,0,0,187,0,300,0,0,0,0,9,0,28,0,0,0,42,0,0,187,0,0,0,0,0,0,0,0,28,0,0,0,44,141,482,0,0,25,0,0,0,10,20,0,0,0,0,2216,1325,551,8,0,0,0,0,5,0,0,0,0,0,97,0,0,0,23,0,0,0,0,0,0,0,0,0,0,13,0,0,0,1342,0,0,0,0,0,0,0,0,0,0,114,0,0,0,0,0,0,0,17,0,0,32,0,0,43,108,0,0,0,0,9,0,0,0,0,0,6,35,0,0,CGCAGATCGCCA,FS_Healthy_2,Healthy,Fecal swab,Farm 2,Healthy rectal swab of farm 2
802.292,31,2371,0,0,0,0,140,102,0,0,0,98,141,0,0,0,0,0,0,0,0,0,0,0,18,23,0,0,29,0,0,0,165,187,0,308,0,0,150,0,0,0,0,0,0,0,0,0,0,48,34,0,0,0,0,0,0,0,0,76,0,0,0,0,0,0,0,0,0,28,403,0,0,0,0,0,0,0,0,0,0,0,183,8,0,11,10,0,20,130,16,15,0,0,0,0,0,0,0,0,0,44,0,0,53,0,0,0,0,0,0,0,62,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19,0,0,0,7,0,1873,10,0,20,0,0,0,0,0,84,0,946,0,88,0,0,0,0,56,0,0,0,0,0,0,0,0,0,58,0,1314,0,220,145,0,0,0,0,0,0,552,0,0,0,0,0,43,882,92,0,0,0,964,20,0,0,0,0,24,0,0,0,75,0,0,0,0,11,54,0,0,119,0,0,14,0,0,313,0,0,0,34,0,0,90,0,0,0,0,0,17,0,0,0,0,29,4,0,98,0,0,344,0,0,0,0,0,71,0,345,0,0,177,49,0,0,0,103,0,86,0,68,0,0,0,0,12,0,0,90,0,214,0,0,0,0,16,0,54,0,0,0,42,0,0,238,0,0,19,0,0,0,0,17,15,0,0,0,0,112,396,20,0,27,0,6,0,0,0,0,0,0,0,886,488,314,5,0,0,0,0,0,0,0,0,0,123,35,0,0,0,28,0,0,0,0,0,0,0,0,0,0,0,0,0,0,618,14,0,0,0,0,0,111,0,0,0,1614,0,0,0,0,0,0,0,11,0,0,19,0,5,97,157,21,0,0,0,0,0,0,0,0,0,74,34,0,0,CGCGTGTCGCCA,FS_Healthy_2,Healthy,Fecal swab,Farm 2,Healthy rectal swab of farm 2
802.293,2,1520,0,0,0,0,34,9,0,0,0,179,116,14,0,0,0,0,33,0,0,0,0,8,0,22,0,0,30,0,0,0,166,80,8,107,0,0,0,0,8,0,0,0,0,0,0,0,33,174,11,0,0,0,46,0,0,0,2,108,8,16,0,0,0,52,0,23,0,18,245,10,10,0,0,0,0,0,0,0,0,0,81,0,0,6,0,0,21,113,20,0,0,0,0,0,61,0,0,6,0,0,0,0,22,0,0,0,0,0,0,0,577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13,0,0,0,10,0,1041,0,0,12,0,0,0,9,13,45,0,2826,0,118,89,0,6,0,2283,0,0,0,0,0,0,0,17,0,0,0,730,0,99,0,48,0,0,0,0,0,358,0,0,0,0,0,14,1097,198,0,0,0,434,12,0,0,0,82,18,0,0,0,64,0,0,0,15,0,37,0,0,95,0,0,6,0,0,469,14,0,0,0,0,0,52,0,0,0,0,23,2,18,0,4,0,28,0,0,109,0,0,272,0,0,0,0,0,55,0,151,0,0,79,0,0,0,0,0,0,37,0,11,0,0,0,0,0,0,0,62,0,12,0,0,0,0,0,0,23,0,0,0,16,7,0,99,0,0,0,0,0,0,0,25,0,0,0,0,17,124,396,23,0,0,0,0,0,0,16,0,0,0,14,921,513,294,5,0,0,0,9,13,8,0,0,0,0,69,0,0,6,19,0,0,39,0,0,0,0,0,0,8,0,0,0,0,235,0,9,0,0,0,0,144,0,0,0,1811,0,0,0,12,0,0,0,22,0,0,14,0,0,95,92,7,0,0,0,6,0,0,0,0,0,72,18,0,0,CGGTCCTCGCCA,FS_Clinical_2,Clinical,Fecal swab,Farm 2,Clinical rectal swab of farm 2
802.294,23,1109,0,0,0,0,103,0,14,0,28,255,278,55,42,29,9,0,0,0,0,0,0,0,21,23,9,0,13,26,0,0,205,202,118,725,0,0,36,0,7,0,0,0,16,0,0,0,35,1003,513,0,0,0,350,63,179,0,136,885,63,161,0,0,0,268,7,237,140,181,1642,0,17,0,60,0,6,0,0,25,13,40,518,41,0,83,0,0,229,393,204,0,0,0,0,0,100,0,0,0,0,37,0,0,120,0,0,0,0,0,16,0,409,0,0,0,0,0,0,0,0,9,0,0,13,0,4,0,18,0,42,0,82,0,476,14,0,84,0,56,15,66,96,31,0,2434,0,159,0,0,0,0,239,0,0,0,0,0,0,29,143,0,168,138,2008,12,635,0,173,0,0,0,0,0,1246,0,0,0,0,4,106,482,55,2,0,0,3230,6,185,0,0,0,0,5,0,17,64,0,0,0,0,16,23,0,0,595,0,120,16,0,0,903,160,36,10,75,0,0,61,0,41,0,0,0,36,0,0,0,0,24,25,0,285,0,0,667,132,0,0,0,67,426,0,442,0,0,509,99,0,0,0,95,0,303,0,144,0,0,0,0,0,13,0,524,0,0,0,32,0,0,0,117,246,0,0,0,91,24,32,306,0,149,55,0,30,0,105,49,0,0,0,0,0,111,351,0,0,39,0,0,84,0,69,19,0,112,93,348,187,107,64,0,0,0,65,123,111,0,19,7,167,391,0,36,0,193,0,0,161,0,0,0,57,0,0,0,0,0,0,0,381,6,0,0,0,0,0,119,0,0,0,778,0,0,0,76,0,24,0,273,15,0,95,0,10,561,208,70,0,0,0,0,37,0,0,10,0,575,55,0,0,CGTGATTCGCCA,FS_Clinical_2,Clinical,Fecal swab,Farm 2,Clinical rectal swab of farm 2
802.295,0,3331,0,32,0,0,0,0,0,0,0,0,108,0,0,0,0,0,0,0,0,0,0,0,0,9,0,0,0,0,0,125,194,101,13,0,0,0,0,0,33,0,0,17,0,0,0,0,71,0,54,0,0,0,0,0,0,0,16,99,0,0,0,0,0,49,0,28,62,54,511,18,0,0,0,0,0,0,0,8,0,15,174,0,0,10,0,0,45,383,117,0,0,0,0,0,0,0,0,0,0,0,0,0,35,0,0,0,0,0,0,0,201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1212,0,0,23,0,0,0,0,0,0,0,2747,0,0,33,0,0,0,838,0,0,0,0,6,0,0,0,0,0,0,1019,0,91,0,0,0,76,0,0,0,129,0,0,0,0,0,0,1139,83,0,0,0,866,19,0,0,0,0,8,0,0,0,61,31,49,9,0,0,33,0,0,0,0,0,0,0,0,364,0,0,0,0,0,0,43,0,16,0,0,0,0,0,0,13,39,15,11,0,170,0,2,493,0,0,0,0,0,71,0,239,0,0,263,36,45,0,0,77,0,97,0,27,0,0,0,0,0,13,0,95,0,39,0,0,0,0,0,0,22,0,0,0,47,0,0,198,0,0,25,17,0,22,0,28,36,0,0,0,0,75,274,88,0,12,0,0,0,0,0,0,0,0,0,993,558,299,0,0,0,0,0,0,0,0,0,4,0,61,0,0,0,14,0,0,0,0,0,0,0,0,0,15,0,0,0,0,326,0,0,0,0,0,0,0,0,0,0,99,0,0,0,0,0,0,3,41,0,0,87,0,0,195,185,0,0,0,0,0,0,0,0,0,0,0,88,0,0,CAGGCAACAAGA,FS_Cull_3,Cull,Fecal swab,Farm 3,Cull rectal swab of farm 3
802.296,2,2280,0,0,0,0,0,0,0,0,0,133,0,0,0,0,0,0,0,0,0,0,0,0,0,14,0,0,36,0,0,0,131,167,10,89,0,0,12,0,0,0,0,0,0,0,0,0,0,24,53,0,0,0,0,0,35,0,4,47,0,0,0,0,0,61,0,0,9,21,394,0,0,0,0,0,0,0,0,0,0,0,136,0,9,11,0,0,26,339,23,0,0,0,0,0,27,0,0,0,0,0,0,0,17,0,0,0,0,0,0,0,488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,994,7,0,6,0,0,0,0,0,0,0,3089,0,28,0,0,0,0,912,0,0,0,0,0,0,0,0,0,0,114,798,0,302,85,0,0,0,0,0,0,329,0,0,0,0,0,0,1099,99,0,0,0,646,13,0,0,0,0,6,0,8,0,89,0,0,0,12,0,0,0,0,129,0,0,19,0,0,381,0,0,0,0,0,0,58,0,0,0,0,0,0,0,0,0,23,0,13,0,77,0,0,302,0,0,0,0,0,0,0,256,28,0,137,0,0,0,56,32,0,67,0,27,0,0,0,0,0,10,0,55,0,178,0,0,0,0,0,0,24,0,0,0,32,0,0,176,0,0,0,0,0,26,0,0,25,0,0,0,0,37,360,42,0,16,0,0,0,0,0,0,0,0,0,837,482,235,12,0,0,0,0,0,0,0,0,0,0,47,0,0,0,35,0,0,0,0,0,0,0,0,0,0,82,20,0,0,196,0,0,0,0,8,0,0,6,0,0,0,0,0,0,0,0,0,0,59,0,0,37,0,0,46,199,7,0,0,0,0,0,0,0,0,0,0,0,0,0,CATACTACAAGA,FS_Cull_3,Cull,Fecal swab,Farm 3,Cull rectal swab of farm 3
802.297,0,1990,0,0,0,0,0,0,0,0,0,42,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22,65,92,0,0,0,0,0,0,20,0,0,0,0,0,0,0,145,0,32,0,0,0,0,0,0,11,0,75,0,0,0,0,0,0,0,20,55,0,155,0,11,0,0,0,0,0,0,0,0,0,12,0,0,6,0,0,0,178,19,0,0,0,0,0,0,17,0,0,0,0,0,0,7,0,0,0,0,0,0,0,51,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,714,0,0,16,0,0,0,0,0,0,0,2473,0,0,0,0,0,0,318,0,0,0,0,0,0,0,0,0,22,32,365,0,56,0,113,0,0,0,0,0,100,0,0,0,0,0,0,1081,123,0,0,0,528,13,0,0,10,0,15,0,0,0,80,0,0,0,0,0,0,0,0,73,0,0,0,0,0,486,0,0,0,0,0,0,62,0,0,0,0,0,4,0,0,0,0,43,0,0,0,0,0,378,28,0,0,0,0,40,0,146,0,0,269,0,0,0,0,55,0,27,0,16,0,0,0,0,0,5,0,65,0,70,0,5,0,0,0,0,13,0,0,0,8,0,0,97,0,0,0,0,0,0,0,0,0,0,0,0,0,74,255,0,0,11,0,0,0,0,0,0,0,0,0,866,480,219,0,0,0,0,0,0,0,0,0,0,0,13,0,0,0,10,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,0,0,0,0,27,0,0,16,0,0,35,67,0,0,0,0,0,0,0,0,0,0,0,0,0,0,CCTAACACAAGA,FS_Healthy_3,Healthy,Fecal swab,Farm 3,Healthy rectal swab of farm 3
802.298,13,3755,0,0,0,5,0,0,0,0,0,41,0,0,0,0,0,0,0,0,0,0,4,0,0,0,9,0,9,0,0,0,102,141,21,33,0,0,0,0,311,0,0,0,0,0,0,0,211,258,331,0,0,0,0,0,45,27,24,257,0,0,0,0,0,105,0,102,127,38,717,38,27,0,0,0,0,0,0,16,8,59,271,18,0,13,0,0,66,717,32,0,0,0,0,0,43,0,0,0,0,0,0,0,62,10,0,0,6,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15,0,0,0,41,0,115,14,0,115,0,0,0,0,0,0,0,1085,0,0,0,0,0,0,1075,0,0,0,0,0,0,0,0,0,5,81,713,0,360,0,0,0,0,0,0,0,466,0,0,0,0,0,0,168,20,0,0,0,1132,11,0,0,0,0,0,0,0,0,66,45,0,0,24,0,0,16,0,157,0,0,0,15,16,676,0,33,0,98,0,0,17,0,38,89,0,0,67,28,0,7,0,49,33,0,105,0,0,596,117,0,0,0,0,404,0,415,107,0,477,69,155,0,52,82,0,124,0,90,0,12,0,0,0,17,0,140,0,583,0,35,0,0,34,0,105,0,0,0,54,0,0,329,0,0,0,125,0,0,0,24,15,0,0,0,0,44,128,0,0,17,0,6,0,0,0,0,0,0,0,78,80,0,0,0,0,0,0,0,0,0,0,0,107,321,0,70,0,42,0,0,16,0,0,0,0,0,0,69,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,157,0,0,0,0,0,0,0,73,0,8,62,0,0,376,294,0,0,0,0,0,0,0,12,0,0,0,19,0,0,CGAGGCACAAGA,FS_Healthy_3,Healthy,Fecal swab,Farm 3,Healthy rectal swab of farm 3
802.299,0,2995,0,0,0,0,0,0,0,0,0,102,0,0,0,0,0,0,0,0,0,0,0,0,0,14,0,0,0,0,0,70,142,129,15,48,6,0,23,0,118,0,0,0,14,0,0,0,18,0,63,0,0,0,0,0,42,0,11,62,0,0,0,0,0,0,0,28,53,35,508,10,0,0,0,0,0,0,0,0,0,24,247,0,28,23,18,0,33,215,17,0,0,0,0,0,46,0,0,0,0,0,0,0,31,0,0,0,0,0,0,0,713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9,0,1510,0,0,10,0,0,0,0,0,0,0,1469,0,15,0,0,0,0,968,0,0,0,0,0,0,0,0,0,29,0,1410,0,422,98,46,0,0,0,0,0,373,0,0,0,0,0,0,1728,172,0,0,0,851,12,0,0,0,0,0,0,0,0,60,0,0,0,0,0,18,0,0,172,0,0,21,0,0,326,0,0,0,0,0,0,64,0,19,0,0,0,38,0,0,12,26,0,6,0,78,0,0,325,0,0,0,0,0,32,0,229,46,0,216,45,0,0,0,71,0,68,0,34,0,0,0,0,0,5,0,31,0,161,25,0,0,0,0,0,43,0,0,0,32,17,0,199,0,0,0,0,0,44,0,12,0,0,0,0,0,45,334,0,0,13,0,0,0,4,0,0,0,0,0,986,767,138,0,0,0,0,0,0,0,0,0,0,0,61,0,0,0,14,0,0,0,0,0,0,0,0,0,0,103,0,0,0,236,0,0,0,0,0,0,0,0,0,0,170,0,0,0,0,0,11,0,86,0,0,26,0,0,115,147,0,0,0,0,0,0,0,0,0,0,0,15,0,0,CGCAGAACAAGA,FS_Clinical_3,Clinical,Fecal swab,Farm 3,Clinical rectal swab of farm 3
802.3,0,1573,0,0,0,0,0,0,0,0,0,331,0,0,0,0,0,0,0,0,0,0,0,0,0,14,7,0,25,0,0,0,122,130,18,0,0,0,0,0,75,0,0,0,0,0,0,0,92,388,113,0,0,0,0,0,0,0,22,30,0,0,0,0,0,37,5,33,20,0,210,0,0,0,0,0,0,0,0,0,0,0,53,0,0,0,0,0,0,151,52,0,0,0,0,0,0,0,0,0,0,0,0,0,21,0,0,0,0,0,0,0,566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19,0,0,0,17,0,1055,5,0,17,0,0,0,0,0,0,0,2251,0,0,0,0,0,0,528,0,9,0,0,0,0,0,0,0,19,0,986,0,154,71,0,0,0,0,0,0,328,0,0,0,0,0,0,1658,101,0,0,0,927,11,0,0,0,0,0,0,0,0,116,0,74,0,0,0,0,0,0,0,0,0,16,0,0,425,0,0,0,0,0,0,108,0,41,0,0,0,0,0,0,8,0,110,0,33,70,0,0,473,0,0,0,0,0,66,0,247,0,0,399,59,0,0,0,0,0,54,0,30,0,0,0,0,0,0,0,56,0,283,0,0,0,0,0,0,52,0,0,0,23,18,0,188,0,90,0,9,0,46,0,45,22,0,0,0,0,118,278,0,0,17,0,0,0,0,0,0,0,0,0,1196,1015,361,0,0,0,0,0,0,0,0,0,0,0,83,0,0,13,12,0,0,24,0,0,0,0,0,0,0,30,0,0,0,188,21,0,0,0,0,0,0,0,0,0,40,0,0,0,0,0,0,0,8,0,0,15,0,0,34,56,0,0,0,0,0,0,0,4,0,0,0,35,0,0,CGCGTGACAAGA,FS_Clinical_3,Clinical,Fecal swab,Farm 3,Clinical rectal swab of farm 3
802.301,12,654,0,0,0,0,4,0,0,0,0,113,0,0,0,0,0,0,0,0,0,0,0,8,0,11,0,0,14,0,0,0,101,122,125,10,0,0,0,0,228,6,0,0,9,0,0,0,139,1276,444,0,11,0,0,0,68,15,23,504,0,51,0,0,0,263,0,245,84,82,540,86,20,0,0,14,0,0,0,108,16,0,195,0,37,14,0,0,68,327,93,0,0,0,56,18,43,0,0,0,0,0,0,0,55,0,0,28,0,0,22,0,696,0,0,0,0,0,0,0,0,0,0,5,0,0,0,0,12,0,0,8,21,0,144,0,0,42,0,0,0,0,0,0,0,2883,4,0,111,0,0,0,27,0,48,0,0,7,0,0,0,0,173,98,1392,0,402,85,258,0,0,0,0,0,1089,0,0,0,0,0,0,155,0,0,0,0,1554,9,0,8,0,0,0,0,0,0,112,0,57,0,16,0,0,20,0,348,0,0,0,0,0,1471,0,12,6,0,0,0,36,0,145,40,0,0,13,0,0,0,0,57,44,32,181,0,0,917,24,0,0,0,0,161,0,562,0,0,650,100,95,0,0,0,0,104,0,46,0,0,0,14,0,0,0,90,48,899,38,25,0,0,0,0,159,0,0,0,70,18,0,236,0,221,0,27,0,64,0,21,34,0,0,0,0,111,284,0,0,37,0,0,0,0,0,0,0,0,0,222,388,0,0,0,0,0,0,0,0,0,0,0,0,328,0,0,0,12,0,0,42,0,0,0,0,0,0,56,0,0,0,0,57,31,0,0,0,0,0,0,0,0,0,31,0,0,0,0,0,15,0,771,11,35,36,0,17,518,1151,4,0,0,0,0,0,0,30,0,0,0,44,21,0,CGGTCCACAAGA,FS_Cull_4,Cull,Fecal swab,Farm 4,Cull rectal swab of farm 4
802.302,0,996,0,0,0,0,0,0,0,0,0,45,0,0,0,0,0,0,0,0,0,0,0,0,0,41,0,0,31,0,0,0,94,133,24,0,0,0,0,0,33,0,0,0,14,0,0,0,166,3416,353,0,0,0,8,0,0,63,39,368,0,0,0,0,0,0,6,282,150,19,108,65,30,0,0,0,0,0,0,14,27,26,155,22,14,14,0,0,45,554,52,0,0,4,0,12,93,0,0,0,0,0,0,0,6,3,0,10,0,9,10,0,1250,0,0,0,0,0,0,0,62,0,0,9,0,0,0,0,0,0,0,18,35,0,359,17,0,61,0,0,0,0,0,0,0,3817,0,0,0,0,0,0,0,107,62,0,14,6,0,0,0,0,108,0,1111,0,256,55,219,0,0,0,0,22,1580,35,0,3,0,0,0,154,30,0,0,0,714,18,0,4,0,135,0,6,0,0,104,61,85,0,27,0,25,9,0,128,0,0,0,0,0,803,0,15,12,0,0,0,81,0,52,52,0,0,63,0,0,13,178,88,25,0,86,0,0,1334,108,0,0,36,0,39,0,477,0,0,529,130,159,0,0,125,0,244,0,23,0,0,0,19,0,33,0,126,0,150,0,30,0,0,0,0,111,16,0,14,181,30,0,333,34,100,0,0,0,135,0,71,23,5,0,0,0,101,179,0,0,9,0,0,0,33,32,0,0,0,0,369,394,110,0,0,0,0,0,0,0,0,0,0,0,295,5,21,0,16,0,0,68,0,0,0,0,0,0,85,75,37,0,0,6,14,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36,0,0,729,22,0,66,0,0,1000,438,0,0,0,0,0,0,0,34,0,0,0,17,72,0,CGTGATACAAGA,FS_Cull_4,Cull,Fecal swab,Farm 4,Cull rectal swab of farm 4
802.303,33,801,0,18,3,0,0,0,0,8,0,137,30,0,0,0,0,0,0,6,0,0,0,0,0,41,0,0,26,0,0,0,140,150,27,56,0,0,0,0,208,0,7,0,127,0,0,0,181,1061,330,6,0,0,27,0,55,24,11,350,0,0,0,0,0,283,7,113,31,138,1476,57,17,0,0,0,4,0,0,61,0,54,368,0,30,46,0,0,93,1139,423,0,0,0,0,0,38,0,0,0,0,0,0,0,104,0,2,12,16,24,0,0,155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,41,0,278,49,0,234,0,0,0,0,0,19,0,1598,0,0,0,0,0,0,7300,0,60,0,0,0,0,0,0,0,79,27,1363,0,423,104,206,0,0,0,0,0,724,0,0,0,0,0,0,239,82,0,0,0,1462,19,6,0,0,0,0,0,0,11,69,0,0,0,33,0,48,0,0,286,32,0,0,15,26,840,0,0,0,0,0,0,24,38,0,0,0,0,99,0,0,0,0,39,37,0,484,0,0,1075,0,0,0,47,0,621,0,724,0,0,995,81,0,44,0,215,0,297,0,19,0,0,0,6,0,68,0,166,0,110,0,13,0,0,0,24,129,0,0,0,139,44,0,146,0,0,23,28,0,0,0,17,0,0,0,0,0,66,202,0,0,17,0,0,0,0,25,0,0,0,0,169,188,93,0,7,0,0,0,0,0,0,0,17,0,88,0,0,0,35,0,0,3,0,0,0,0,11,9,30,19,16,0,0,719,13,0,7,0,0,0,0,6,0,0,359,0,0,0,0,0,18,13,236,6,18,104,0,10,571,755,0,0,0,0,0,0,0,28,19,0,0,521,0,0,CAGGCAACAGCG,FS_Healthy_4,Healthy,Fecal swab,Farm 4,Healthy rectal swab of farm 4
802.304,0,295,0,11,0,0,0,0,0,0,0,33,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67,133,16,0,0,0,0,0,346,0,0,0,14,0,0,0,12,259,174,0,0,0,16,0,0,0,19,150,0,0,0,0,0,77,0,46,0,32,942,11,0,0,0,0,0,0,0,0,0,26,224,20,20,0,0,0,46,340,81,0,0,0,0,0,72,0,0,0,0,0,0,0,29,0,0,0,0,0,0,0,32,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6,0,0,0,0,0,179,10,9,58,0,0,0,0,0,0,0,560,0,0,0,0,0,0,2971,0,48,0,0,0,0,0,0,0,0,0,598,0,224,144,0,0,0,0,0,0,281,0,0,0,0,0,0,37,26,0,0,0,1052,4,0,0,0,0,5,0,0,0,0,34,0,0,0,0,28,0,0,205,0,0,0,6,0,632,0,0,0,0,0,0,0,0,48,0,0,0,0,0,0,0,0,0,0,0,39,0,0,349,0,0,0,0,0,169,0,198,0,0,289,30,0,0,0,43,0,49,0,13,0,0,0,0,0,20,0,23,0,637,100,0,0,0,0,0,46,0,0,0,35,0,0,50,0,0,0,14,0,0,0,8,0,0,10,0,0,0,61,0,0,20,0,0,0,0,0,0,0,0,0,132,105,48,0,0,0,7,0,5,0,0,0,0,0,34,0,0,0,9,0,0,0,0,0,0,0,25,5,9,0,0,0,0,130,0,0,0,0,0,0,0,0,0,0,118,0,0,0,0,0,0,0,118,0,8,44,0,0,156,596,0,0,0,0,0,0,0,20,0,0,0,47,0,0,CATACTACAGCG,FS_Healthy_4,Healthy,Fecal swab,Farm 4,Healthy rectal swab of farm 4
802.305,0,421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22,62,10,41,0,0,0,0,7,0,0,0,11,0,0,0,61,156,110,0,0,0,0,0,23,0,11,65,0,0,0,0,0,0,0,115,0,14,122,0,0,0,0,0,0,0,0,0,0,16,253,0,0,0,0,0,0,179,146,0,0,0,0,0,0,0,0,0,0,0,0,0,29,0,0,0,8,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,8,0,0,0,7,0,99,21,0,70,0,0,0,0,0,0,0,924,0,0,0,0,0,0,458,0,3,0,0,0,0,0,0,0,10,0,596,0,468,0,92,0,0,0,0,0,186,0,0,0,0,0,0,133,0,0,0,0,722,0,0,0,0,0,0,0,0,0,49,0,0,0,0,0,27,0,0,163,0,0,0,0,0,478,0,0,0,88,0,0,0,0,24,0,0,0,0,0,0,0,0,15,0,0,81,0,0,220,0,0,0,0,0,80,0,351,0,0,418,41,50,0,0,54,0,162,0,0,0,0,0,0,0,34,0,0,0,130,0,0,0,0,0,0,21,0,0,0,24,9,0,51,0,0,12,0,0,0,0,24,0,0,0,0,0,30,85,0,0,0,0,0,0,0,0,0,0,0,0,73,128,0,0,0,0,0,0,0,0,0,0,0,0,22,0,16,0,2,0,0,0,0,0,0,0,3,0,0,0,0,0,0,15,0,0,0,0,0,0,0,0,0,0,41,0,0,0,0,0,0,5,18,0,0,51,0,0,166,138,0,0,0,0,0,0,0,0,0,0,0,16,0,0,CCTAACACAGCG,FS_Clinical_4,Clinical,Fecal swab,Farm 4,Clinical rectal swab of farm 4
802.306,0,2334,0,0,0,0,0,0,0,0,0,40,0,0,0,0,0,0,0,0,0,0,0,0,0,11,0,0,0,0,0,0,56,88,21,55,0,0,4,0,0,0,0,0,57,0,0,0,41,392,230,0,0,0,0,0,0,0,6,85,0,0,0,0,0,122,0,40,26,85,467,13,9,0,0,0,0,0,0,12,0,0,298,14,0,6,0,0,112,285,202,0,0,0,0,0,48,0,0,0,0,0,0,0,41,0,0,0,17,7,0,0,77,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,0,12,0,177,25,0,58,0,0,0,0,0,0,0,738,0,0,0,0,0,0,3040,0,55,0,0,0,0,0,0,0,26,0,1039,0,631,54,0,0,0,0,0,0,548,0,0,5,0,0,0,280,39,0,0,0,845,9,0,0,0,0,0,0,0,0,49,0,56,0,26,0,0,0,0,225,0,0,0,6,0,400,0,0,0,39,0,0,0,0,33,0,0,0,41,0,0,16,0,21,27,0,57,0,0,524,0,0,0,25,0,150,0,491,0,0,486,54,0,0,0,101,0,52,0,28,0,0,0,0,0,24,0,34,0,104,0,5,0,0,0,10,36,0,0,0,20,9,0,85,0,0,0,45,0,2,0,13,15,0,0,0,0,8,69,0,0,16,0,0,0,0,18,0,0,0,0,82,130,0,0,0,0,0,0,7,0,0,0,7,0,36,0,9,0,11,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42,0,0,0,0,0,0,0,0,0,0,138,0,0,0,0,0,7,0,63,0,6,49,0,0,161,340,0,0,0,0,0,0,0,0,0,0,0,52,0,0,CGAGGCACAGCG,FS_Clinical_4,Clinical,Fecal swab,Farm 4,Clinical rectal swab of farm 4
802.307,11,1077,0,0,4,0,0,0,0,4,0,133,0,0,0,0,0,0,0,0,0,0,0,0,7,19,0,0,11,0,0,0,111,199,57,83,0,0,0,0,162,0,0,0,133,0,0,0,191,684,700,6,0,0,0,0,78,0,95,706,0,0,0,0,0,249,0,283,155,145,1938,49,26,0,0,0,0,0,0,40,8,78,669,70,58,52,0,0,209,1007,487,0,0,0,0,0,58,0,0,0,0,3,0,0,73,0,0,0,63,0,0,0,64,0,0,0,10,0,0,0,0,0,0,0,13,9,0,0,20,0,0,2,49,0,55,41,12,196,0,0,0,0,0,0,0,1205,0,29,0,13,0,0,588,0,144,0,0,0,0,0,0,0,193,86,1513,7,890,82,223,23,0,5,0,0,886,0,0,18,0,0,0,113,23,0,0,0,2687,6,0,0,0,0,0,0,0,0,95,0,60,0,0,5,21,12,0,612,0,44,0,0,10,696,0,0,0,81,16,0,0,0,68,0,0,27,37,0,26,10,18,0,33,37,392,0,3,808,38,0,0,57,70,348,0,782,0,0,863,51,0,0,0,81,0,136,0,53,0,0,0,0,0,32,34,191,0,182,123,17,0,0,49,0,74,0,0,0,178,31,0,143,0,80,58,28,0,16,0,0,0,0,7,9,0,88,162,0,0,33,0,0,0,4,12,0,0,0,0,27,65,0,0,0,0,0,0,0,0,0,0,0,44,138,0,31,142,29,0,23,119,0,0,0,11,0,0,27,0,0,0,0,0,11,0,0,0,0,0,0,10,0,0,159,0,0,0,0,0,44,13,448,0,22,39,0,18,954,1766,0,0,0,0,0,0,10,21,0,0,0,17,17,0,CGCAGAACAGCG,FS_Cull_5,Cull,Fecal swab,Farm 5,Cull rectal swab of farm 5
802.308,21,952,0,0,0,0,0,0,0,0,0,16,0,0,0,0,0,0,0,0,0,0,0,0,0,3,0,0,0,0,0,0,47,106,52,158,0,0,138,0,75,0,0,0,130,0,0,0,15,203,229,5,0,0,0,0,8,0,27,247,0,0,0,0,0,79,0,52,14,49,869,13,0,0,0,0,0,0,0,22,0,24,438,0,97,26,0,0,83,701,265,0,0,0,0,0,0,0,0,0,0,0,0,0,39,0,0,0,0,0,80,0,213,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,6,0,0,0,6,0,37,19,0,34,0,0,0,0,0,0,0,2366,0,0,0,0,0,0,571,0,5,0,0,0,0,0,0,0,88,60,1044,0,1172,174,177,0,0,0,0,0,270,0,0,14,0,0,0,116,0,0,0,0,2462,0,0,0,0,0,0,0,0,0,17,0,0,0,0,0,0,0,0,499,0,32,0,0,0,499,0,0,0,0,0,0,0,0,32,0,0,0,0,30,0,8,0,0,11,15,298,0,0,417,30,0,0,43,14,104,0,552,0,0,229,61,0,0,0,33,0,46,0,38,0,0,0,0,0,36,35,0,0,189,116,0,0,0,0,0,92,0,0,0,91,41,0,33,0,49,0,30,0,22,0,0,0,0,0,8,0,18,90,0,0,36,0,0,0,0,0,0,0,0,0,39,99,0,0,0,0,0,0,0,0,0,0,11,0,56,0,0,0,14,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4,16,0,0,0,0,0,0,0,0,0,235,0,0,0,0,3,0,6,112,0,0,47,0,10,283,798,0,0,0,0,0,0,0,0,7,0,0,0,0,15,CGCGTGACAGCG,FS_Cull_5,Cull,Fecal swab,Farm 5,Cull rectal swab of farm 5
802.309,2,297,0,0,0,0,0,0,0,0,0,65,8,0,0,0,0,0,0,0,0,0,0,0,0,13,0,0,0,0,0,0,62,0,22,49,0,0,0,0,80,0,4,0,37,0,0,0,64,371,241,0,0,0,0,0,32,15,5,172,0,0,0,0,0,91,0,49,20,51,705,17,29,0,0,0,0,0,0,32,4,37,244,21,0,23,0,0,52,602,226,7,0,0,0,0,0,0,0,0,0,28,0,0,55,65,0,0,20,0,0,0,96,0,0,0,9,0,0,0,0,0,0,0,0,0,0,0,12,0,0,0,21,0,123,28,18,68,0,0,0,0,0,0,0,599,0,0,0,0,0,0,855,0,22,0,0,0,0,0,0,0,22,0,830,0,271,81,158,0,0,0,0,0,290,0,0,0,0,0,0,0,0,0,0,0,873,0,0,0,0,0,0,0,0,0,40,0,0,0,0,0,0,0,0,176,24,0,0,0,0,625,0,0,19,0,0,0,18,0,40,0,0,0,0,0,0,0,0,0,0,17,183,0,0,381,0,0,0,0,16,205,0,232,0,0,554,56,0,0,0,61,0,33,0,38,3,0,0,0,0,24,0,104,0,0,0,0,0,0,0,0,24,0,0,0,66,0,0,97,0,0,0,0,0,0,0,0,0,0,0,0,0,32,106,0,0,33,0,0,0,7,22,0,0,0,0,39,83,0,0,5,0,0,0,0,0,0,0,0,0,64,0,19,0,15,0,0,9,0,0,0,0,0,0,13,0,0,0,0,206,6,0,0,0,0,0,13,0,0,0,208,0,0,0,0,0,0,0,45,8,0,63,0,0,288,218,0,0,0,0,0,0,0,15,0,0,0,87,17,0,CGGTCCACAGCG,FS_Healthy_5,Healthy,Fecal swab,Farm 5,Healthy rectal swab of farm 5
802.31,8,433,0,32,0,0,18,0,0,0,0,67,0,0,0,0,0,0,0,0,0,0,0,0,0,51,0,0,28,0,0,0,145,180,32,182,0,0,3,0,14,0,20,0,36,0,0,0,390,784,690,8,0,10,23,0,58,106,79,555,0,0,0,0,0,197,11,110,40,114,2013,64,28,0,0,0,0,0,0,61,5,103,388,47,46,26,0,0,199,1268,552,0,0,0,0,0,72,0,7,0,13,10,0,0,49,7,0,0,79,30,0,0,81,0,0,0,19,0,0,0,0,0,0,0,13,0,0,0,36,0,0,16,93,0,370,82,16,313,3,0,0,0,0,0,0,782,0,33,0,0,0,0,1120,0,72,0,7,0,0,0,0,0,236,47,1591,0,273,128,295,0,0,0,0,0,509,0,0,0,0,0,0,449,0,11,0,0,1764,21,0,0,0,0,18,0,0,16,56,56,36,0,0,9,67,0,0,348,0,0,0,44,47,1496,0,0,0,64,0,0,58,0,0,0,0,0,47,43,0,30,0,17,40,6,487,0,0,1417,0,0,0,54,0,588,0,775,0,0,1426,77,0,0,0,223,0,222,0,73,8,0,0,0,0,59,49,231,0,0,0,12,0,0,0,19,123,0,0,34,171,70,0,155,0,125,115,32,22,6,0,28,0,0,0,0,0,77,248,0,0,60,0,0,0,26,33,0,0,0,0,138,183,75,9,0,0,0,0,0,0,0,0,21,0,114,0,0,0,35,11,0,14,0,0,6,0,0,0,0,51,0,5,0,23,11,0,0,0,0,0,0,0,0,0,192,6,0,16,11,7,37,15,441,0,26,139,0,0,1116,529,0,0,0,0,0,0,19,48,0,0,0,211,16,0,CGTGATACAGCG,FS_Healthy_5,Healthy,Fecal swab,Farm 5,Healthy rectal swab of farm 5
802.311,6,1283,0,0,0,0,0,0,0,0,0,88,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,24,64,45,148,0,0,0,6,0,0,0,0,5,0,0,0,15,185,183,0,0,0,0,0,17,0,12,500,0,0,0,0,0,256,0,244,89,66,606,61,11,0,0,0,0,0,0,0,0,24,254,18,16,32,0,0,207,428,151,0,0,0,0,0,0,0,0,0,0,0,0,0,88,0,0,0,16,0,0,0,162,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,91,21,0,47,0,0,0,0,0,0,0,1277,0,0,0,0,0,0,189,0,0,0,0,0,11,0,0,0,170,0,522,0,174,0,135,0,0,0,0,0,537,24,0,0,0,0,0,211,26,0,0,0,962,0,0,0,0,0,0,0,0,0,0,0,0,0,14,0,24,0,0,388,0,0,6,0,0,417,0,0,0,0,0,0,19,0,31,0,0,0,0,0,0,0,0,24,16,0,213,0,0,418,0,0,0,20,15,0,0,365,0,0,132,0,0,0,0,31,0,0,0,54,0,0,0,0,0,10,0,9,0,143,0,0,0,0,19,0,141,0,0,0,33,0,0,153,0,106,37,0,0,0,0,13,0,0,0,0,0,25,97,0,0,25,0,0,0,0,0,0,0,0,0,50,166,0,0,0,0,0,0,0,0,0,0,0,140,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11,0,0,0,0,0,0,0,0,0,0,0,0,11,0,0,423,0,0,0,0,8,0,0,118,0,0,75,0,0,255,240,0,0,0,0,0,0,0,0,0,0,0,7,0,0,CAGGCAACATAC,FS_Clinical_5,Clinical,Fecal swab,Farm 5,Clinical rectal swab of farm 5
802.312,5,1744,0,0,0,0,0,0,0,0,0,69,35,0,0,0,0,0,0,12,0,0,0,0,0,6,6,0,5,0,0,7,203,150,59,709,0,0,28,38,48,0,0,0,14,0,0,30,54,175,297,0,0,0,0,0,95,0,25,263,0,0,0,0,0,143,0,195,37,40,1925,33,0,0,0,0,0,0,0,7,0,41,235,0,12,16,0,0,53,1148,174,0,0,0,0,0,60,0,0,0,0,0,0,0,136,0,0,0,0,0,0,0,473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,275,16,0,102,0,0,0,0,0,77,0,1519,0,0,0,0,0,12,4112,0,5,0,0,0,0,0,0,6,56,0,1479,0,214,112,116,0,0,0,0,0,538,0,0,0,0,0,0,362,64,0,0,0,1533,0,0,0,0,0,0,13,0,7,0,139,67,0,22,0,44,0,0,405,0,36,0,0,0,1135,0,0,0,62,0,0,18,0,70,0,0,69,62,0,0,0,0,23,11,39,246,0,0,480,47,0,0,0,0,128,0,470,0,0,224,54,0,0,0,63,0,94,0,112,0,0,0,0,0,30,0,63,0,146,144,0,21,0,35,0,138,0,0,0,69,36,0,235,0,0,31,54,0,14,0,28,16,0,0,0,0,67,269,32,0,57,0,0,0,0,7,0,0,0,0,124,295,0,0,0,0,0,0,0,0,0,0,0,78,69,0,0,0,53,0,0,3,0,0,0,0,0,6,0,31,0,0,0,322,0,0,0,0,0,0,0,0,0,0,1861,0,0,0,0,0,0,0,48,0,0,97,0,0,418,311,26,0,0,0,0,11,0,0,14,0,0,26,0,0,CATACTACATAC,FS_Clinical_5,Clinical,Fecal swab,Farm 5,Clinical rectal swab of farm 5
802.313,0,217,0,0,0,0,0,0,0,0,0,10,0,0,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,0,0,0,24,85,0,13,0,0,0,0,0,0,0,0,0,0,0,0,6,0,45,0,0,0,0,0,0,0,0,60,0,0,0,0,0,36,0,14,9,0,189,0,0,0,0,0,0,0,0,17,0,12,36,0,0,0,0,0,0,464,19,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5,0,22,6,0,17,0,0,0,0,0,0,0,955,0,0,0,0,0,0,611,0,0,0,0,0,0,0,0,0,0,0,266,0,101,0,96,0,0,0,0,0,326,0,0,0,0,0,0,40,0,0,0,0,709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,199,0,0,0,0,12,522,0,0,0,56,0,0,0,0,44,0,0,0,19,0,0,0,5,0,0,0,105,0,0,215,0,0,0,0,0,39,0,74,0,0,233,0,0,0,0,28,0,12,0,27,0,0,0,0,0,9,0,35,0,0,0,0,0,0,0,21,38,0,0,0,18,0,0,107,0,0,0,0,0,0,0,0,4,0,0,0,0,38,139,0,0,13,0,0,0,0,0,0,0,0,0,24,0,31,0,0,0,0,0,0,0,0,0,0,0,21,0,29,0,12,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15,0,0,0,0,0,0,0,0,0,0,46,0,0,0,0,0,0,0,88,0,0,24,0,0,259,106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,CCTAACACATAC,FS_Cull_6,Cull,Fecal swab,Farm 6,Cull rectal swab of farm 6
802.314,11,9670,0,0,15,0,0,0,0,0,0,106,0,0,0,0,0,0,0,0,0,0,0,0,0,19,0,0,23,0,0,0,150,128,99,80,5,0,72,0,193,0,5,0,90,0,0,0,46,584,954,0,0,0,0,5,110,28,173,955,6,0,0,0,43,348,16,325,71,178,914,264,45,0,0,14,0,0,0,29,34,53,348,46,61,104,0,0,179,1181,266,0,2,0,0,0,67,0,0,0,0,0,0,0,89,0,0,8,75,0,0,0,334,0,0,0,0,0,0,0,0,0,0,0,4,0,0,0,16,0,0,0,18,0,139,12,16,108,0,0,0,0,0,0,22,3693,0,21,0,0,0,0,45,226,101,0,0,0,0,0,0,0,363,33,1775,0,531,158,193,0,76,0,0,0,1263,15,0,38,0,0,0,331,34,0,0,0,2234,0,0,0,0,0,0,0,0,0,138,0,74,0,34,12,32,0,0,484,0,35,0,8,0,1049,0,0,7,0,0,0,48,0,55,0,0,0,94,0,0,104,66,22,36,0,430,0,0,1335,0,0,0,37,0,185,0,1144,0,28,808,195,0,0,0,118,0,150,0,169,0,23,0,0,0,42,26,92,0,512,0,25,0,0,0,0,159,0,0,62,217,0,0,444,0,0,72,95,0,30,0,21,32,0,0,0,0,148,254,0,49,35,0,0,0,0,0,0,0,0,0,141,165,0,0,0,0,0,0,0,0,0,0,0,0,165,0,27,0,43,0,0,19,0,0,0,0,0,0,51,61,0,0,0,94,7,0,0,0,0,0,0,0,14,0,107,0,0,0,0,8,51,21,553,0,57,100,0,0,717,1393,0,0,0,0,0,0,0,75,0,0,0,16,0,0,CGAGGCACATAC,FS_Cull_6,Cull,Fecal swab,Farm 6,Cull rectal swab of farm 6
802.315,11,2076,0,28,0,0,0,0,0,0,0,98,19,0,0,0,0,0,0,0,0,0,0,0,17,17,0,11,15,0,0,0,160,160,73,168,0,0,0,0,295,0,0,0,63,0,0,0,152,360,510,0,17,0,6,0,132,49,148,540,0,0,0,0,0,456,17,186,69,86,2766,112,65,0,0,30,0,0,0,73,6,53,727,0,27,156,0,0,90,919,143,0,0,0,0,0,63,0,0,0,0,0,0,0,124,0,0,0,184,0,0,0,250,0,0,0,0,0,0,0,0,0,0,8,0,3,0,0,0,0,0,7,0,14,271,27,0,116,0,0,0,0,0,0,0,3550,0,20,49,0,0,0,75,0,14,0,0,0,0,0,0,0,95,38,1725,0,784,0,301,0,0,0,0,0,969,0,38,13,0,0,0,333,61,0,0,0,1732,0,0,0,0,0,0,0,0,17,80,0,49,0,55,0,45,0,0,638,0,0,0,16,28,1564,0,0,5,72,0,0,30,0,89,0,0,0,29,55,0,36,0,0,23,54,211,0,0,867,42,0,0,0,0,117,48,706,0,22,640,127,0,0,0,98,0,78,8,80,0,0,0,15,0,28,0,115,0,197,0,24,0,0,0,38,196,0,0,0,99,34,0,438,0,49,112,22,0,48,0,41,12,0,0,0,0,127,395,0,0,43,0,0,0,0,15,0,0,0,0,162,184,83,0,0,0,0,0,0,0,0,0,0,0,195,0,41,0,46,0,0,27,0,0,0,0,0,0,0,36,0,0,0,113,6,0,0,0,0,0,0,0,0,0,158,0,0,0,0,16,29,12,224,0,11,113,0,19,364,441,23,0,0,0,0,0,5,25,0,0,0,34,27,0,CGCAGAACATAC,FS_Healthy_6,Healthy,Fecal swab,Farm 6,Healthy rectal swab of farm 6
802.316,40,1515,0,89,0,0,0,0,0,0,0,0,103,0,0,0,0,0,0,0,8,0,0,0,25,34,11,0,38,0,4,0,302,153,140,1152,0,0,16,19,883,0,0,0,58,38,0,42,142,112,712,0,22,0,0,0,118,0,240,793,0,50,0,0,0,495,0,275,85,113,2503,66,43,0,28,15,0,5,0,97,10,100,1043,34,99,151,70,31,223,1295,140,0,0,36,0,0,0,0,0,0,0,22,2,24,239,0,0,15,14,0,0,0,172,0,0,0,0,0,0,84,0,9,0,0,0,0,0,0,0,32,0,0,0,0,289,35,0,95,0,0,0,0,0,0,0,1800,0,0,0,0,0,7,162,0,62,0,0,0,0,0,0,0,256,50,2246,0,539,117,168,62,0,0,16,0,635,0,17,7,0,0,0,386,0,5,0,0,3309,12,0,0,0,0,0,8,0,0,0,151,101,0,0,8,180,0,0,636,0,65,0,16,0,865,0,0,0,104,0,23,36,0,0,0,0,0,41,0,0,23,27,0,24,0,266,0,0,755,0,63,0,0,0,235,0,668,0,0,513,88,0,0,119,96,30,207,0,181,13,0,0,0,0,44,0,203,0,553,0,0,30,0,0,39,316,0,6,0,130,24,0,758,0,0,62,94,0,8,0,133,7,0,0,20,0,84,335,48,0,62,0,0,0,0,33,0,0,0,0,367,256,121,0,0,7,0,4,0,0,0,0,19,155,172,0,0,0,48,0,0,0,0,0,0,22,0,16,29,0,0,0,0,276,36,0,0,4,0,0,0,20,0,0,688,0,46,0,0,0,53,20,209,0,26,197,0,95,685,497,114,0,25,12,0,40,3,14,0,0,168,140,0,17,CGCGTGACATAC,FS_Healthy_6,Healthy,Fecal swab,Farm 6,Healthy rectal swab of farm 6
802.317,20,1879,0,55,0,0,0,0,0,0,0,83,104,0,0,0,0,12,0,0,0,2,0,0,29,34,0,0,64,0,0,0,289,219,184,1299,0,21,29,0,1005,5,0,0,68,33,2,28,111,497,879,4,18,0,8,0,318,102,312,1195,0,88,20,0,0,539,11,350,64,111,3162,158,171,0,14,25,0,0,0,142,18,114,1299,53,115,217,91,0,222,1626,181,49,0,0,0,0,0,0,0,0,0,26,0,12,263,0,0,9,44,0,0,0,306,0,0,0,6,0,0,38,0,0,9,0,0,0,3,8,24,59,10,71,32,0,349,52,0,210,0,0,0,0,0,54,0,3256,0,0,0,0,0,0,390,0,46,7,0,0,15,0,13,0,325,57,2874,0,564,120,273,56,0,0,0,19,829,0,12,19,0,0,0,483,63,0,0,25,2977,24,0,0,0,0,0,0,0,7,50,111,79,0,23,0,129,0,0,611,0,47,0,10,25,1616,0,26,25,123,0,0,42,0,66,0,24,0,40,0,0,23,33,0,46,0,414,0,0,1135,0,0,0,0,0,340,0,703,0,0,778,72,0,0,49,169,22,286,0,159,16,0,31,0,0,44,0,192,0,494,13,33,17,0,31,54,281,0,0,0,307,37,0,572,0,88,108,142,35,46,0,126,32,0,0,0,0,212,501,53,91,87,4,0,0,0,44,0,0,0,0,385,457,0,0,0,0,0,0,0,0,0,0,11,78,279,0,133,0,58,13,0,45,7,0,20,0,0,11,22,45,0,0,15,252,17,0,0,0,6,0,0,17,0,11,743,0,24,0,0,0,62,27,373,0,39,326,6,86,944,648,130,0,16,0,0,24,0,28,0,6,126,160,38,9,CGGTCCACATAC,FS_Clinical_6,Clinical,Fecal swab,Farm 6,Clinical rectal swab of farm 6
802.318,29,1163,0,0,0,5,0,0,0,0,0,293,99,0,0,0,0,0,0,13,0,0,0,0,23,46,0,0,40,0,0,0,263,250,275,511,0,0,14,0,480,10,19,0,102,0,0,0,392,1364,1454,7,53,0,0,0,453,120,412,852,0,0,16,6,41,522,15,515,164,174,3637,190,228,21,0,26,0,0,4,138,25,204,1127,69,132,133,0,0,368,2448,270,0,0,12,0,6,63,0,5,0,0,0,0,0,178,0,0,0,41,0,0,0,857,2,0,0,19,0,0,25,0,0,0,20,23,8,0,0,0,10,0,36,38,0,507,67,13,320,0,0,0,0,0,0,0,5008,0,19,46,0,10,0,727,0,162,17,18,0,29,0,0,0,336,17,2822,0,572,138,396,0,0,0,0,0,1953,0,0,20,5,0,0,415,101,3,0,31,3605,39,0,0,0,37,12,0,0,19,248,76,51,0,54,0,82,42,11,537,0,0,0,32,0,1150,0,26,31,182,0,23,82,0,221,38,0,0,222,17,0,49,79,62,70,24,789,40,14,2257,96,0,27,42,0,402,0,937,0,0,1833,169,0,0,0,228,0,718,0,258,14,0,0,24,0,29,54,349,0,758,118,78,0,42,0,0,430,0,0,0,445,157,0,581,38,0,141,213,105,162,0,118,25,0,0,22,0,236,539,0,143,102,0,0,0,16,46,0,28,0,0,271,339,0,0,0,0,0,0,0,0,0,0,14,76,309,0,233,49,50,30,0,73,0,19,0,0,0,24,30,116,0,0,0,431,0,0,0,0,0,0,0,15,20,0,513,0,0,15,0,12,98,78,904,0,85,619,0,33,2933,701,33,0,0,0,0,0,6,48,0,0,12,114,116,4,CGTGATACATAC,FS_Clinical_6,Clinical,Fecal swab,Farm 6,Clinical rectal swab of farm 6