Information for 4-TGCCGG (Motif 11)


Reverse Opposite:

p-value:1e-343
log p-value:-7.903e+02
Information Content per bp:1.762
Number of Target Sequences with motif25147.0
Percentage of Target Sequences with motif31.17%
Number of Background Sequences with motif177489.0
Percentage of Background Sequences with motif24.64%
Average Position of motif in Targets152.7 +/- 161.5bp
Average Position of motif in Background135.1 +/- 146.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4304 MIMAT0016854 Homo sapiens miR-4304 Targets (miRBase)

Match Rank:1
Score:0.72
Offset:-11
Orientation:forward strand
Alignment:-----------TGCCGG
TGCCCTGGACATGCCGG

hsa-miR-1205 MIMAT0005869 Homo sapiens miR-1205 Targets (miRBase)

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGCCGG------------
TCTGCAGGGTTTGCTTTGAG

hsa-miR-4530 MIMAT0019069 Homo sapiens miR-4530 Targets (miRBase)

Match Rank:3
Score:0.71
Offset:-11
Orientation:forward strand
Alignment:-----------TGCCGG-
CGCTCCCGTCCTGCTGGG

hsa-miR-338-3p MIMAT0000763 Homo sapiens miR-338-3p Targets (miRBase)

Match Rank:4
Score:0.69
Offset:-15
Orientation:forward strand
Alignment:---------------TGCCGG-
CAACAAAATCACTGATGCTGGA

hsa-miR-634 MIMAT0003304 Homo sapiens miR-634 Targets (miRBase)

Match Rank:5
Score:0.69
Offset:-14
Orientation:forward strand
Alignment:--------------TGCCGG--
GTCCAAAGTTGGGGTGCTGGTT

hsa-miR-3692* MIMAT0018121 Homo sapiens miR-3692* Targets (miRBase)

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGCCGG----------------
CCTGCTGGTCAGGAGTGGATACTG

hsa-miR-4734 MIMAT0019859 Homo sapiens miR-4734 Targets (miRBase)

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGCCGG--------------
GCTGCGGGCTGCGGTCAGGGCG

hsa-miR-4418 MIMAT0018930 Homo sapiens miR-4418 Targets (miRBase)

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGCCGG---------
CACTGCAGGACTCAGCAG

hsa-miR-3158-5p MIMAT0019211 Homo sapiens miR-3158-5p Targets (miRBase)

Match Rank:9
Score:0.63
Offset:-15
Orientation:forward strand
Alignment:---------------TGCCGG
GAAGGGCTTCCTCTCTGCAGG

hsa-miR-4772-3p MIMAT0019927 Homo sapiens miR-4772-3p Targets (miRBase)

Match Rank:10
Score:0.63
Offset:-16
Orientation:forward strand
Alignment:----------------TGCCGG
TCTGATCAGGCAAAGTTGCAGG