Information for 11-TTGAAA (Motif 28)


Reverse Opposite:

p-value:1e-154
log p-value:-3.552e+02
Information Content per bp:1.975
Number of Target Sequences with motif68340.0
Percentage of Target Sequences with motif84.70%
Number of Background Sequences with motif583168.6
Percentage of Background Sequences with motif80.95%
Average Position of motif in Targets153.6 +/- 167.4bp
Average Position of motif in Background137.6 +/- 146.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.79
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-1305 MIMAT0005893 Homo sapiens miR-1305 Targets (miRBase)

Match Rank:1
Score:0.80
Offset:-15
Orientation:forward strand
Alignment:---------------TTGAAA-
TCTCTCCCATTAGAGTTGAAAA

hsa-miR-488 MIMAT0004763 Homo sapiens miR-488 Targets (miRBase)

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTGAAA---------------
TTGAAAGGCTATTTCTTGGTC

hsa-miR-653 MIMAT0003328 Homo sapiens miR-653 Targets (miRBase)

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTGAAA------------
GTGTTGAAACAATCTCTACTG

hsa-miR-498 MIMAT0002824 Homo sapiens miR-498 Targets (miRBase)

Match Rank:4
Score:0.71
Offset:-17
Orientation:forward strand
Alignment:-----------------TTGAAA
GAAAAACGCCCCCTGGCTTGAAA

hsa-miR-607 MIMAT0003275 Homo sapiens miR-607 Targets (miRBase)

Match Rank:5
Score:0.65
Offset:-15
Orientation:forward strand
Alignment:---------------TTGAAA
GTTATAGATCTGGATTTGAAC

hsa-miR-203 MIMAT0000264 Homo sapiens miR-203 Targets (miRBase)

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTGAAA----------------
GTGAAATGTTTAGGACCACTAG

hsa-miR-4272 MIMAT0016902 Homo sapiens miR-4272 Targets (miRBase)

Match Rank:7
Score:0.64
Offset:-11
Orientation:forward strand
Alignment:-----------TTGAAA-
ACAATCACTAGTTGAATG

hsa-miR-5096 MIMAT0020603 Homo sapiens miR-5096 Targets (miRBase)

Match Rank:8
Score:0.62
Offset:-14
Orientation:forward strand
Alignment:--------------TTGAAA-
GCCTGACCAACATGGTGAAAC

hsa-miR-205* MIMAT0009197 Homo sapiens miR-205* Targets (miRBase)

Match Rank:9
Score:0.62
Offset:-13
Orientation:forward strand
Alignment:-------------TTGAAA--
GAACTTCACTCCACTGAAATC

hsa-miR-676* MIMAT0018203 Homo sapiens miR-676* Targets (miRBase)

Match Rank:10
Score:0.62
Offset:-14
Orientation:forward strand
Alignment:--------------TTGAAA-
TGCAAGTCCTGAGGTTGAAGA