Information for 14-TTCTGCACGC (Motif 29)


Reverse Opposite:

p-value:1e-110
log p-value:-2.535e+02
Information Content per bp:1.842
Number of Target Sequences with motif46838.0
Percentage of Target Sequences with motif54.19%
Number of Background Sequences with motif377034.3
Percentage of Background Sequences with motif50.19%
Average Position of motif in Targets158.7 +/- 161.7bp
Average Position of motif in Background131.9 +/- 150.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3944-5p MIMAT0019231 Homo sapiens miR-3944-5p Targets (miRBase)

Match Rank:1
Score:0.65
Offset:-12
Orientation:forward strand
Alignment:------------TTCTGCACGC
TCTCGGTTGGCCTGCTGCACA-

hsa-miR-544 MIMAT0003164 Homo sapiens miR-544 Targets (miRBase)

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTCTGCACGC-----------
ATTCTGCATTTTTAGCAAGTTC

hsa-miR-1205 MIMAT0005869 Homo sapiens miR-1205 Targets (miRBase)

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTCTGCACGC-----------
-TCTGCAGGGTTTGCTTTGAG

hsa-miR-4291 MIMAT0016922 Homo sapiens miR-4291 Targets (miRBase)

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTCTGCACGC------
TTCAGCAGGAACAGCT

hsa-miR-2276 MIMAT0011775 Homo sapiens miR-2276 Targets (miRBase)

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTCTGCACGC-------------
-TCTGCAAGTGTCAGAGGCGAGG

hsa-miR-1973 MIMAT0009448 Homo sapiens miR-1973 Targets (miRBase)

Match Rank:6
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------TTCTGCACGC-
TATGCTACCTTTGCACGGT

hsa-miR-3619-5p MIMAT0017999 Homo sapiens miR-3619-5p Targets (miRBase)

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTCTGCACGC-------------
-TCAGCAGGCAGGCTGGTGCAGC

hsa-miR-147b MIMAT0004928 Homo sapiens miR-147b Targets (miRBase)

Match Rank:8
Score:0.58
Offset:-12
Orientation:forward strand
Alignment:------------TTCTGCACGC
TAGCAGAAGCATTTCCGCACAC

hsa-miR-3158-5p MIMAT0019211 Homo sapiens miR-3158-5p Targets (miRBase)

Match Rank:9
Score:0.57
Offset:-12
Orientation:forward strand
Alignment:------------TTCTGCACGC
GAAGGGCTTCCTCTCTGCAGG-

hsa-miR-4793-3p MIMAT0019966 Homo sapiens miR-4793-3p Targets (miRBase)

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTCTGCACGC--------------
-TCTGCACTGTGAGTTGGCTGGCT