Information for 14-ATCCAGAT (Motif 16)


Reverse Opposite:

p-value:1e-14
log p-value:-3.226e+01
Information Content per bp:1.786
Number of Target Sequences with motif158.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif639.7
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets29.5 +/- 23.9bp
Average Position of motif in Background28.7 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4782-5p MIMAT0019944 Homo sapiens miR-4782-5p Targets (miRBase)

Match Rank:1
Score:0.77
Offset:-14
Orientation:forward strand
Alignment:--------------ATCCAGAT
TTGATTGTCTTCATATCCAGAA

hsa-miR-488* MIMAT0002804 Homo sapiens miR-488* Targets (miRBase)

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ATCCAGAT--------------
-CCCAGATAATGGCACTCTCAA

hsa-miR-1243 MIMAT0005894 Homo sapiens miR-1243 Targets (miRBase)

Match Rank:3
Score:0.69
Offset:-14
Orientation:forward strand
Alignment:--------------ATCCAGAT
CACTCCTATAATTGATCCAGTT

hsa-miR-516b MIMAT0002859 Homo sapiens miR-516b Targets (miRBase)

Match Rank:4
Score:0.68
Offset:-14
Orientation:forward strand
Alignment:--------------ATCCAGAT
AAAGTGCTTCTTACCTCCAGAT

hsa-miR-3126-3p MIMAT0015377 Homo sapiens miR-3126-3p Targets (miRBase)

Match Rank:5
Score:0.67
Offset:-13
Orientation:forward strand
Alignment:-------------ATCCAGAT-
TCTGTGTGACGGATGCCAGATG

hsa-miR-3942-3p MIMAT0019230 Homo sapiens miR-3942-3p Targets (miRBase)

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATCCAGAT-------------
TTTCAGATAACAGTATTACAT

hsa-miR-619 MIMAT0003288 Homo sapiens miR-619 Targets (miRBase)

Match Rank:7
Score:0.65
Offset:-15
Orientation:forward strand
Alignment:---------------ATCCAGAT-
ACTGGGCACAAACATGTCCAGGTC

hsa-miR-1912 MIMAT0007887 Homo sapiens miR-1912 Targets (miRBase)

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATCCAGAT-------------
TACCCAGAGCATGCAGTGTGAA

hsa-miR-4267 MIMAT0016893 Homo sapiens miR-4267 Targets (miRBase)

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATCCAGAT---------
-TCCAGCTCGGTGGCAC

hsa-miR-1299 MIMAT0005887 Homo sapiens miR-1299 Targets (miRBase)

Match Rank:10
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------ATCCAGAT
TCCCTCACACAGAATTCCAGAA