Information for 6-AAAHCAACA (Motif 15)


Reverse Opposite:

p-value:1e-339
log p-value:-7.814e+02
Information Content per bp:1.706
Number of Target Sequences with motif70508.0
Percentage of Target Sequences with motif81.58%
Number of Background Sequences with motif568820.1
Percentage of Background Sequences with motif75.71%
Average Position of motif in Targets150.8 +/- 152.7bp
Average Position of motif in Background138.8 +/- 148.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.77
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4781-3p MIMAT0019943 Homo sapiens miR-4781-3p Targets (miRBase)

Match Rank:1
Score:0.64
Offset:-11
Orientation:forward strand
Alignment:-----------AAAHCAACA--
CTCTAGCGAGGATTCCAACATT

hsa-miR-548ad MIMAT0018946 Homo sapiens miR-548ad Targets (miRBase)

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAAHCAACA------------
GAAAACGACAATGACTTTTGCA

hsa-miR-1267 MIMAT0005921 Homo sapiens miR-1267 Targets (miRBase)

Match Rank:3
Score:0.62
Offset:-10
Orientation:forward strand
Alignment:----------AAAHCAACA--
TGGGGATTACACTTCAACAGG

hsa-miR-495 MIMAT0002817 Homo sapiens miR-495 Targets (miRBase)

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAHCAACA-------------
AAACAAACATGGTGCACTTCTT

hsa-miR-570 MIMAT0003235 Homo sapiens miR-570 Targets (miRBase)

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAAHCAACA-----------
CGAAAACAGCAATTACCTTTGC

hsa-miR-421 MIMAT0003339 Homo sapiens miR-421 Targets (miRBase)

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AAAHCAACA----------------
--ATCAACAGACATTAATTGGGCGC

hsa-miR-551b* MIMAT0004794 Homo sapiens miR-551b* Targets (miRBase)

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAAHCAACA------------
GAAATCAAGCGTGGGTGAGACC

hsa-miR-548aa MIMAT0018447 Homo sapiens miR-548aa Targets (miRBase)

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAAHCAACA---------------
AAAAACCACAATTACTTTTGCACCA

hsa-miR-876-3p MIMAT0004925 Homo sapiens miR-876-3p Targets (miRBase)

Match Rank:9
Score:0.59
Offset:-13
Orientation:forward strand
Alignment:-------------AAAHCAACA
TGAATTACTTTGTAAACCACCA

hsa-miR-4709-5p MIMAT0019811 Homo sapiens miR-4709-5p Targets (miRBase)

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAAHCAACA----------------
---ACAACAGTGACTTGCTCTCCAA