Information for 3-TAMVGG (Motif 5)


Reverse Opposite:

p-value:1e-699
log p-value:-1.611e+03
Information Content per bp:1.625
Number of Target Sequences with motif53110.0
Percentage of Target Sequences with motif61.45%
Number of Background Sequences with motif385669.7
Percentage of Background Sequences with motif51.33%
Average Position of motif in Targets157.9 +/- 155.7bp
Average Position of motif in Background135.5 +/- 155.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.65
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-938 MIMAT0004981 Homo sapiens miR-938 Targets (miRBase)

Match Rank:1
Score:0.66
Offset:-14
Orientation:forward strand
Alignment:--------------TAMVGG--
ACTGGGTTCACCTTTAAGGGCA

hsa-miR-4509 MIMAT0019046 Homo sapiens miR-4509 Targets (miRBase)

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TAMVGG--------------
ACTAAAGGATATAGAAGGTTTT

hsa-miR-5095 MIMAT0020600 Homo sapiens miR-5095 Targets (miRBase)

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAMVGG--------------
TTACAGGCGTGAACCACCGCG

hsa-miR-99b MIMAT0000689 Homo sapiens miR-99b Targets (miRBase)

Match Rank:4
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------TAMVGG--
CGCAAGGTCGGTTCTACGGGTG

hsa-miR-100 MIMAT0000098 Homo sapiens miR-100 Targets (miRBase)

Match Rank:5
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------TAMVGG--
CACAAGTTCGGATCTACGGGTT

hsa-miR-99a MIMAT0000097 Homo sapiens miR-99a Targets (miRBase)

Match Rank:6
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------TAMVGG--
CACAAGATCGGATCTACGGGTT

hsa-miR-486-5p MIMAT0002177 Homo sapiens miR-486-5p Targets (miRBase)

Match Rank:7
Score:0.64
Offset:-15
Orientation:forward strand
Alignment:---------------TAMVGG-
CTCGGGGCAGCTCAGTACAGGA

hsa-miR-205 MIMAT0000266 Homo sapiens miR-205 Targets (miRBase)

Match Rank:8
Score:0.61
Offset:-15
Orientation:forward strand
Alignment:---------------TAMVGG-
CAGACTCCGGTGGAATGAAGGA

hsa-miR-1205 MIMAT0005869 Homo sapiens miR-1205 Targets (miRBase)

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAMVGG------------
TCTGCAGGGTTTGCTTTGAG

hsa-miR-1226* MIMAT0005576 Homo sapiens miR-1226* Targets (miRBase)

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAMVGG-------------------
GTGAGGGCATGCAGGCCTGGATGGGG