Basic Statistics
Measure | Value |
---|---|
Filename | E743-input-2-mRNA_all.fq.clean_fq_reverse |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 38611163 |
Sequence length | 16-147 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TGTGTGCCTAATACATGCATGTTGAACGGGATGTAGCAATACATTCAGTA | 89743 | 0.23242760131312284 | No Hit |
CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTG | 74379 | 0.19263600011219553 | No Hit |
GTGGGCGTTGGAATATTGATGAGAGCTGCTCTTAGTACGAGAGGACCGGA | 54910 | 0.14221275852271015 | No Hit |
GGCCGGTGTTCTTCAGGATCTGCTTGCTCACCATGGTTGTGGCCATTATC | 48680 | 0.12607752840804096 | No Hit |
GATTCGAAGTGAGAATCTTCGACGCCTATTGGGAAAGGTTTCCTGGGCAA | 45389 | 0.11755408662515554 | No Hit |
ACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGCGCC | 40079 | 0.10380158712132033 | No Hit |
Kmer Content
No overrepresented Kmers