Information for 5-GRVGNAG (Motif 6)


Reverse Opposite:

p-value:1e-103
log p-value:-2.372e+02
Information Content per bp:1.519
Number of Target Sequences with motif10913.0
Percentage of Target Sequences with motif18.34%
Number of Background Sequences with motif67212.7
Percentage of Background Sequences with motif14.88%
Average Position of motif in Targets22.7 +/- 9.8bp
Average Position of motif in Background20.3 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4516 MIMAT0019053 Homo sapiens miR-4516 Targets (miRBase)

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GRVGNAG---------
GGGAGAAGGGTCGGGGC

hsa-miR-4434 MIMAT0018950 Homo sapiens miR-4434 Targets (miRBase)

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GRVGNAG----------
AGGAGAAGTAAAGTAGAA

hsa-miR-4271 MIMAT0016901 Homo sapiens miR-4271 Targets (miRBase)

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GRVGNAG-----------
GGGGGAAGAAAAGGTGGGG

hsa-miR-765 MIMAT0003945 Homo sapiens miR-765 Targets (miRBase)

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GRVGNAG-------------
TGGAGGAGAAGGAAGGTGATG

hsa-miR-324-3p MIMAT0000762 Homo sapiens miR-324-3p Targets (miRBase)

Match Rank:5
Score:0.65
Offset:-12
Orientation:forward strand
Alignment:------------GRVGNAG-
CCAGCAGCACCTGGGGCAGT

hsa-miR-4725-3p MIMAT0019844 Homo sapiens miR-4725-3p Targets (miRBase)

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GRVGNAG--------------
TGGGGAAGGCGTCAGTGTCGGG

hsa-miR-486-3p MIMAT0004762 Homo sapiens miR-486-3p Targets (miRBase)

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GRVGNAG-------------
CGGGGCAGCTCAGTACAGGAT

hsa-miR-1913 MIMAT0007888 Homo sapiens miR-1913 Targets (miRBase)

Match Rank:8
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------GRVGNAG-
TGGCAGCAGCGGAGGGGGCAGA

hsa-miR-25* MIMAT0004498 Homo sapiens miR-25* Targets (miRBase)

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GRVGNAG-------------
AGGCGGAGACTTGGGCAATTG

hsa-miR-4723-5p MIMAT0019838 Homo sapiens miR-4723-5p Targets (miRBase)

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GRVGNAG----------------
TGGGGGAGCCATGAGATAAGAGCA