Basic Statistics
Measure | Value |
---|---|
Filename | E743-input-1-mRNA_all.fq.clean_fq_reverse |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 47442522 |
Sequence length | 16-147 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TGTGTGCCTAATACATGCATGTTGAACGGGATGTAGCAATACATTCAGTA | 119723 | 0.25235378507070094 | No Hit |
CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTG | 94782 | 0.19978280244039304 | No Hit |
GTGGGCGTTGGAATATTGATGAGAGCTGCTCTTAGTACGAGAGGACCGGA | 71553 | 0.15082039694264146 | No Hit |
GGCCGGTGTTCTTCAGGATCTGCTTGCTCACCATGGTTGTGGCCATTATC | 66403 | 0.13996515615253338 | No Hit |
ACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGCGCC | 52555 | 0.11077615140274372 | No Hit |
GAGGTAGTGACGAAAAATAACAATACAGGACTCTTTCGAGGCCCTGTAAT | 50666 | 0.106794491237207 | No Hit |
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGCCT | 8297095 | 1.8906972 | 5.187071 | 5 |