Information for 7-CCCCCCMCCC (Motif 9)


Reverse Opposite:

p-value:1e-30
log p-value:-7.053e+01
Information Content per bp:1.443
Number of Target Sequences with motif937.0
Percentage of Target Sequences with motif9.75%
Number of Background Sequences with motif5131.9
Percentage of Background Sequences with motif6.43%
Average Position of motif in Targets27.8 +/- 19.2bp
Average Position of motif in Background28.9 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4472 MIMAT0018999 Homo sapiens miR-4472 Targets (miRBase)

Match Rank:1
Score:0.67
Offset:-9
Orientation:forward strand
Alignment:---------CCCCCCMCCC
AAAACAACACCCCCCACC-

hsa-miR-4447 MIMAT0018966 Homo sapiens miR-4447 Targets (miRBase)

Match Rank:2
Score:0.61
Offset:-8
Orientation:forward strand
Alignment:--------CCCCCCMCCC
AAACAACAGCCCCCACC-

hsa-miR-92a-2* MIMAT0004508 Homo sapiens miR-92a-2* Targets (miRBase)

Match Rank:3
Score:0.59
Offset:-14
Orientation:forward strand
Alignment:--------------CCCCCCMCCC
GTAATGCAACAAATCCCCACCC--

hsa-miR-4728-5p MIMAT0019849 Homo sapiens miR-4728-5p Targets (miRBase)

Match Rank:4
Score:0.59
Offset:-12
Orientation:forward strand
Alignment:------------CCCCCCMCCC-
TGCTTGCTGCCTCTCCCCTCCCA

hsa-miR-1224-3p MIMAT0005459 Homo sapiens miR-1224-3p Targets (miRBase)

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCCCCCMCCC-----------
CCCCACCTCCTCTCTCCTCAG

hsa-miR-1275 MIMAT0005929 Homo sapiens miR-1275 Targets (miRBase)

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCCCCCMCCC--
GACAGCCTCTCCCCCAC

hsa-miR-149* MIMAT0004609 Homo sapiens miR-149* Targets (miRBase)

Match Rank:7
Score:0.57
Offset:-13
Orientation:forward strand
Alignment:-------------CCCCCCMCCC
GCACAGCCCCCGTCCCTCCCT--

hsa-miR-4651 MIMAT0019715 Homo sapiens miR-4651 Targets (miRBase)

Match Rank:8
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------CCCCCCMCCC--
GCCCGACCTCACCCACCCCG

hsa-miR-4455 MIMAT0018977 Homo sapiens miR-4455 Targets (miRBase)

Match Rank:9
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CCCCCCMCCC-
AAAAACACACACACCCT

hsa-miR-532-3p MIMAT0004780 Homo sapiens miR-532-3p Targets (miRBase)

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCCCCCMCCC------------
CCTCCCACACCCAAGGCTTGCA