Information for 4-KGTTTAATTG (Motif 12)


Reverse Opposite:

p-value:1e-328
log p-value:-7.569e+02
Information Content per bp:1.480
Number of Target Sequences with motif54021.0
Percentage of Target Sequences with motif66.95%
Number of Background Sequences with motif432148.2
Percentage of Background Sequences with motif59.99%
Average Position of motif in Targets155.3 +/- 169.4bp
Average Position of motif in Background133.6 +/- 147.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.72
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4275 MIMAT0016905 Homo sapiens miR-4275 Targets (miRBase)

Match Rank:1
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------KGTTTAATTG-
AAAGAAGTGGTAATTGG

hsa-miR-885-5p MIMAT0004947 Homo sapiens miR-885-5p Targets (miRBase)

Match Rank:2
Score:0.61
Offset:-11
Orientation:forward strand
Alignment:-----------KGTTTAATTG-
AGAGGCAGGGTAGTGTAATGGA

hsa-miR-4703-3p MIMAT0019802 Homo sapiens miR-4703-3p Targets (miRBase)

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:KGTTTAATTG--------------
--TGTAGTTGTATTGTATTGCCAC

hsa-miR-302f MIMAT0005932 Homo sapiens miR-302f Targets (miRBase)

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:KGTTTAATTG-----------
----TAATTGCTTCCATGTTT

hsa-miR-1297 MIMAT0005886 Homo sapiens miR-1297 Targets (miRBase)

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----KGTTTAATTG--
CACCTGAATTACTTGAA

hsa-miR-3065-5p MIMAT0015066 Homo sapiens miR-3065-5p Targets (miRBase)

Match Rank:6
Score:0.55
Offset:-12
Orientation:forward strand
Alignment:------------KGTTTAATTG-
TCCAGCATCAGTGATTTTGTTGA

hsa-miR-26a MIMAT0000082 Homo sapiens miR-26a Targets (miRBase)

Match Rank:7
Score:0.55
Offset:-10
Orientation:forward strand
Alignment:----------KGTTTAATTG--
AGCCTATCCTGGATTACTTGAA

hsa-miR-3671 MIMAT0018094 Homo sapiens miR-3671 Targets (miRBase)

Match Rank:8
Score:0.55
Offset:-10
Orientation:forward strand
Alignment:----------KGTTTAATTG--
TGCAGACTAGTCCTTATTTGAT

hsa-miR-3545-3p MIMAT0019814 Homo sapiens miR-3545-3p Targets (miRBase)

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:KGTTTAATTG---------------
--TTGAACTGTTAAGAACCACTGGA

hsa-miR-935 MIMAT0004978 Homo sapiens miR-935 Targets (miRBase)

Match Rank:10
Score:0.54
Offset:-12
Orientation:forward strand
Alignment:------------KGTTTAATTG-
GCGGTAGCGGAAGCGGTAACTGG