Information for 12-GGACGCCTCA (Motif 30)


Reverse Opposite:

p-value:1e-130
log p-value:-3.008e+02
Information Content per bp:1.860
Number of Target Sequences with motif15829.0
Percentage of Target Sequences with motif19.62%
Number of Background Sequences with motif116621.7
Percentage of Background Sequences with motif16.19%
Average Position of motif in Targets163.1 +/- 170.6bp
Average Position of motif in Background131.1 +/- 151.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3186-5p MIMAT0015067 Homo sapiens miR-3186-5p Targets (miRBase)

Match Rank:1
Score:0.66
Offset:-13
Orientation:forward strand
Alignment:-------------GGACGCCTCA
AAGCCACGTAGACAGACGCCTG-

hsa-miR-4649-3p MIMAT0019712 Homo sapiens miR-4649-3p Targets (miRBase)

Match Rank:2
Score:0.65
Offset:-9
Orientation:forward strand
Alignment:---------GGACGCCTCA--
TGGGGAGAGGCAGGCCTCAGA

hsa-miR-1914* MIMAT0007890 Homo sapiens miR-1914* Targets (miRBase)

Match Rank:3
Score:0.61
Offset:-12
Orientation:forward strand
Alignment:------------GGACGCCTCA
CCTCCCAGTGCGGGACCCCTCC

hsa-miR-4316 MIMAT0016867 Homo sapiens miR-4316 Targets (miRBase)

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGACGCCTCA--
CACCAGCTAGCCTCACC

hsa-miR-1304 MIMAT0005892 Homo sapiens miR-1304 Targets (miRBase)

Match Rank:5
Score:0.58
Offset:-10
Orientation:forward strand
Alignment:----------GGACGCCTCA--
CACATCTCACTGTAGCCTCAAA

hsa-miR-566 MIMAT0003230 Homo sapiens miR-566 Targets (miRBase)

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGACGCCTCA---------
GGGCGCCTGTGATCCCAAC

hsa-miR-4787-3p MIMAT0019957 Homo sapiens miR-4787-3p Targets (miRBase)

Match Rank:7
Score:0.56
Offset:-12
Orientation:forward strand
Alignment:------------GGACGCCTCA--
GCGCGGGGCAGTGGGCGGCGCATC

hsa-miR-614 MIMAT0003282 Homo sapiens miR-614 Targets (miRBase)

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGACGCCTCA-------------
GAACGCCTGTTCTTGCCAGGTGG

hsa-miR-1281 MIMAT0005939 Homo sapiens miR-1281 Targets (miRBase)

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGACGCCTCA---------
--TCGCCTCCTCCTCTCCC

hsa-miR-644 MIMAT0003314 Homo sapiens miR-644 Targets (miRBase)

Match Rank:10
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------GGACGCCTCA--
GCTCTAAGAAAGCCACACT