Information for 10-CTKTNTRCYC (Motif 27)


Reverse Opposite:

p-value:1e-169
log p-value:-3.903e+02
Information Content per bp:1.589
Number of Target Sequences with motif21786.0
Percentage of Target Sequences with motif27.00%
Number of Background Sequences with motif162702.4
Percentage of Background Sequences with motif22.58%
Average Position of motif in Targets150.6 +/- 170.8bp
Average Position of motif in Background139.9 +/- 140.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-675* MIMAT0006790 Homo sapiens miR-675* Targets (miRBase)

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTKTNTRCYC----------
CTGTATGCCCTCACCGCTCA

hsa-miR-4468 MIMAT0018995 Homo sapiens miR-4468 Targets (miRBase)

Match Rank:2
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------CTKTNTRCYC-
ATCTCATCCTTCTGCTCT

hsa-miR-4742-3p MIMAT0019873 Homo sapiens miR-4742-3p Targets (miRBase)

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTKTNTRCYC------------
TCTGTATTCTCCTTTGCCTGCAG

hsa-miR-4261 MIMAT0016890 Homo sapiens miR-4261 Targets (miRBase)

Match Rank:4
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CTKTNTRCYC
TGGGTCCCTGTTTCCT-

hsa-miR-892a MIMAT0004907 Homo sapiens miR-892a Targets (miRBase)

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTKTNTRCYC---------
CACTGTGTCCTTTCTGCGTAG

hsa-miR-346 MIMAT0000773 Homo sapiens miR-346 Targets (miRBase)

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTKTNTRCYC--------------
-TGTCTGCCCGCATGCCTGCCTCT

hsa-miR-3132 MIMAT0014997 Homo sapiens miR-3132 Targets (miRBase)

Match Rank:7
Score:0.57
Offset:-13
Orientation:forward strand
Alignment:-------------CTKTNTRCYC-
TCCTCTGAGCTCCTTCTCTACCCA

hsa-miR-1237 MIMAT0005592 Homo sapiens miR-1237 Targets (miRBase)

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTKTNTRCYC----------
TCCTTCTGCTCCGTCCCCCAG

hsa-miR-4273 MIMAT0016903 Homo sapiens miR-4273 Targets (miRBase)

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTKTNTRCYC----------
--GTGTTCTCTGATGGACAG

hsa-miR-4288 MIMAT0016918 Homo sapiens miR-4288 Targets (miRBase)

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTKTNTRCYC-------
TTGTCTGCTGAGTTTCC