Information for 6-GRWATAAGTM (Motif 19)


Reverse Opposite:

p-value:1e-254
log p-value:-5.860e+02
Information Content per bp:1.665
Number of Target Sequences with motif62755.0
Percentage of Target Sequences with motif77.78%
Number of Background Sequences with motif520476.6
Percentage of Background Sequences with motif72.25%
Average Position of motif in Targets151.1 +/- 159.5bp
Average Position of motif in Background133.8 +/- 147.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3669 MIMAT0018092 Homo sapiens miR-3669 Targets (miRBase)

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GRWATAAGTM-----------
ACGGAATATGTATACGGAATATA

hsa-miR-944 MIMAT0004987 Homo sapiens miR-944 Targets (miRBase)

Match Rank:2
Score:0.58
Offset:-12
Orientation:forward strand
Alignment:------------GRWATAAGTM
CTCATCCGATGTACAATAATTT

hsa-miR-29a* MIMAT0004503 Homo sapiens miR-29a* Targets (miRBase)

Match Rank:3
Score:0.56
Offset:-13
Orientation:forward strand
Alignment:-------------GRWATAAGTM
CTGAACACCAAAAGAAATCAGT-

hsa-miR-4439 MIMAT0018957 Homo sapiens miR-4439 Targets (miRBase)

Match Rank:4
Score:0.55
Offset:-10
Orientation:forward strand
Alignment:----------GRWATAAGTM--
ATGCCTCCAAGGTATCAGTCAC

hsa-miR-3682-5p MIMAT0019222 Homo sapiens miR-3682-5p Targets (miRBase)

Match Rank:5
Score:0.54
Offset:-11
Orientation:forward strand
Alignment:-----------GRWATAAGTM-
ATGATAACACAGGTAGAAGTAG

hsa-miR-219-2-3p MIMAT0004675 Homo sapiens miR-219-2-3p Targets (miRBase)

Match Rank:6
Score:0.53
Offset:-11
Orientation:forward strand
Alignment:-----------GRWATAAGTM-
ACAGATGTCCAGCCACAATTCT

hsa-miR-137 MIMAT0000429 Homo sapiens miR-137 Targets (miRBase)

Match Rank:7
Score:0.52
Offset:-16
Orientation:forward strand
Alignment:----------------GRWATAAGTM
CTACGCGTATTCTTAAGCAATAA---

hsa-miR-4798-5p MIMAT0019974 Homo sapiens miR-4798-5p Targets (miRBase)

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GRWATAAGTM---------
TTCGGTATACTTTGTGAATTGG

hsa-miR-3144-3p MIMAT0015015 Homo sapiens miR-3144-3p Targets (miRBase)

Match Rank:9
Score:0.51
Offset:-15
Orientation:forward strand
Alignment:---------------GRWATAAGTM
TAAAGAGACCGAACAGGTATAT---

hsa-miR-144* MIMAT0004600 Homo sapiens miR-144* Targets (miRBase)

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GRWATAAGTM-----------
GGATATCATCATATACTGTAAG