Information for 15-ATWTATATAT (Motif 13)


Reverse Opposite:

p-value:1e-19
log p-value:-4.429e+01
Information Content per bp:1.463
Number of Target Sequences with motif391.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1733.2
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets21.8 +/- 9.0bp
Average Position of motif in Background19.0 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-568 MIMAT0003232 Homo sapiens miR-568 Targets (miRBase)

Match Rank:1
Score:0.67
Offset:-10
Orientation:forward strand
Alignment:----------ATWTATATAT
GTGTGTATACATTTATACAT

hsa-miR-3924 MIMAT0018199 Homo sapiens miR-3924 Targets (miRBase)

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATWTATATAT--------------
--ATATGTATATGTGACTGCTACT

hsa-miR-4729 MIMAT0019851 Homo sapiens miR-4729 Targets (miRBase)

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATWTATATAT----------
TCATTTATCTGTTGGGAAGCTA

hsa-miR-577 MIMAT0003242 Homo sapiens miR-577 Targets (miRBase)

Match Rank:4
Score:0.59
Offset:-12
Orientation:forward strand
Alignment:------------ATWTATATAT
CAGGTACCAATATTTTATCTA-

hsa-miR-4799-5p MIMAT0019976 Homo sapiens miR-4799-5p Targets (miRBase)

Match Rank:5
Score:0.58
Offset:-14
Orientation:forward strand
Alignment:--------------ATWTATATAT
GACTGGCATGCTGCATTTAGAT--

hsa-miR-297 MIMAT0004450 Homo sapiens miR-297 Targets (miRBase)

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATWTATATAT-----------
ATGTATGTGTGCATGTGCATG

hsa-miR-1284 MIMAT0005941 Homo sapiens miR-1284 Targets (miRBase)

Match Rank:7
Score:0.56
Offset:-11
Orientation:forward strand
Alignment:-----------ATWTATATAT-
GAAAAGCCAGGGTCTGTATAGA

hsa-miR-3935 MIMAT0018350 Homo sapiens miR-3935 Targets (miRBase)

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATWTATATAT-------------
-TGTAGATACGAGCACCAGCCAC

hsa-let-7a* MIMAT0004481 Homo sapiens let-7a* Targets (miRBase)

Match Rank:9
Score:0.55
Offset:-11
Orientation:forward strand
Alignment:-----------ATWTATATAT
GAAAGACAGTAGATTGTATAG

hsa-let-7b* MIMAT0004482 Homo sapiens let-7b* Targets (miRBase)

Match Rank:10
Score:0.55
Offset:-12
Orientation:forward strand
Alignment:------------ATWTATATAT
GGGAAGGCAGTAGGTTGTATAG