Information for 12-AACAAA (Motif 27)


Reverse Opposite:

p-value:1e-178
log p-value:-4.103e+02
Information Content per bp:1.982
Number of Target Sequences with motif58989.0
Percentage of Target Sequences with motif68.25%
Number of Background Sequences with motif476155.8
Percentage of Background Sequences with motif63.38%
Average Position of motif in Targets157.8 +/- 148.3bp
Average Position of motif in Background138.7 +/- 158.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.72
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-495 MIMAT0002817 Homo sapiens miR-495 Targets (miRBase)

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AACAAA---------------
AAACAAACATGGTGCACTTCTT

hsa-miR-7-2* MIMAT0004554 Homo sapiens miR-7-2* Targets (miRBase)

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AACAAA---------------
CAACAAATCCCAGTCTACCTAA

hsa-miR-7-1* MIMAT0004553 Homo sapiens miR-7-1* Targets (miRBase)

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AACAAA---------------
CAACAAATCACAGTCTGCCATA

hsa-miR-3065-5p MIMAT0015066 Homo sapiens miR-3065-5p Targets (miRBase)

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--AACAAA---------------
TCAACAAAATCACTGATGCTGGA

hsa-miR-375 MIMAT0000728 Homo sapiens miR-375 Targets (miRBase)

Match Rank:5
Score:0.72
Offset:-16
Orientation:forward strand
Alignment:----------------AACAAA
TCACGCGAGCCGAACGAACAAA

hsa-miR-802 MIMAT0004185 Homo sapiens miR-802 Targets (miRBase)

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AACAAA-------------
CAGTAACAAAGATTCATCCTTGT

hsa-miR-520d-5p MIMAT0002855 Homo sapiens miR-520d-5p Targets (miRBase)

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AACAAA-------------
CTACAAAGGGAAGCCCTTTC

hsa-miR-589* MIMAT0003256 Homo sapiens miR-589* Targets (miRBase)

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AACAAA--------------
TCAGAACAAATGCCGGTTCCCAGA

hsa-miR-2113 MIMAT0009206 Homo sapiens miR-2113 Targets (miRBase)

Match Rank:9
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------AACAAA-
GTGACAGAGCCAAGCACAAAT

hsa-miR-4803 MIMAT0019983 Homo sapiens miR-4803 Targets (miRBase)

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AACAAA--------------
TAACATAATAGTGTGGATTGA