Information for 12-CCGCAGATC (Motif 22)


Reverse Opposite:

p-value:1e-13
log p-value:-3.098e+01
Information Content per bp:1.826
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif108.9
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets23.6 +/- 12.0bp
Average Position of motif in Background32.1 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4330 MIMAT0016924 Homo sapiens miR-4330 Targets (miRBase)

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CCGCAGATC----------
CCTCAGATCAGAGCCTTGC

hsa-miR-3194-3p MIMAT0019218 Homo sapiens miR-3194-3p Targets (miRBase)

Match Rank:2
Score:0.67
Offset:-12
Orientation:forward strand
Alignment:------------CCGCAGATC-
ACTGCCAGTGAGCAGCAGAGCT

hsa-miR-558 MIMAT0003222 Homo sapiens miR-558 Targets (miRBase)

Match Rank:3
Score:0.66
Offset:-9
Orientation:forward strand
Alignment:---------CCGCAGATC-
ATTTTGGTACAGCAGCTCA

hsa-miR-4686 MIMAT0019773 Homo sapiens miR-4686 Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-14
Orientation:forward strand
Alignment:--------------CCGCAGATC
AACACCAGAAAGCCCAGCAGATA

hsa-miR-492 MIMAT0002812 Homo sapiens miR-492 Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-12
Orientation:forward strand
Alignment:------------CCGCAGATC--
AAGAATCTTGTCCCGCAGGTCCT

hsa-miR-4527 MIMAT0019066 Homo sapiens miR-4527 Targets (miRBase)

Match Rank:6
Score:0.62
Offset:-12
Orientation:forward strand
Alignment:------------CCGCAGATC-
ACAGTCATCTCTTTGCAGACCA

hsa-miR-922 MIMAT0004972 Homo sapiens miR-922 Targets (miRBase)

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGCAGATC-------------
GCAGCAGAGAATAGGACTACGTC

hsa-miR-4734 MIMAT0019859 Homo sapiens miR-4734 Targets (miRBase)

Match Rank:8
Score:0.61
Offset:-15
Orientation:forward strand
Alignment:---------------CCGCAGATC
CGCCCTGACCGCAGCCCGCAGC--

hsa-miR-3158-5p MIMAT0019211 Homo sapiens miR-3158-5p Targets (miRBase)

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGCAGATC-----------
CCTGCAGAGAGGAAGCCCTTC

hsa-miR-147b MIMAT0004928 Homo sapiens miR-147b Targets (miRBase)

Match Rank:10
Score:0.60
Offset:-14
Orientation:forward strand
Alignment:--------------CCGCAGATC
TAGCAGAAGCATTTCCGCACAC-