Information for 8-TGACCCAC (Motif 29)


Reverse Opposite:

p-value:1e-137
log p-value:-3.175e+02
Information Content per bp:1.844
Number of Target Sequences with motif42533.0
Percentage of Target Sequences with motif52.71%
Number of Background Sequences with motif346287.0
Percentage of Background Sequences with motif48.07%
Average Position of motif in Targets151.0 +/- 160.7bp
Average Position of motif in Background133.0 +/- 147.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-551a MIMAT0003214 Homo sapiens miR-551a Targets (miRBase)

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TGACCCAC------------
GCGACCCACTCTTGGTTTCCA

hsa-miR-551b MIMAT0003233 Homo sapiens miR-551b Targets (miRBase)

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGACCCAC------------
GCGACCCATACTTGGTTTCAG

hsa-miR-3151 MIMAT0015024 Homo sapiens miR-3151 Targets (miRBase)

Match Rank:3
Score:0.67
Offset:-12
Orientation:forward strand
Alignment:------------TGACCCAC-
ACCTGATCCCATTGCCCCACC

hsa-miR-3940-5p MIMAT0019229 Homo sapiens miR-3940-5p Targets (miRBase)

Match Rank:4
Score:0.66
Offset:-12
Orientation:forward strand
Alignment:------------TGACCCAC
CAGAGCCCGCCCCAACCCAC

hsa-miR-4758-3p MIMAT0019904 Homo sapiens miR-4758-3p Targets (miRBase)

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGACCCAC---------------
TGCCCCACCTGCTGACCACCCTC

hsa-miR-215 MIMAT0000272 Homo sapiens miR-215 Targets (miRBase)

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGACCCAC------------
ATGACCTATGAATTGACAGAC

hsa-miR-192 MIMAT0000222 Homo sapiens miR-192 Targets (miRBase)

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGACCCAC------------
CTGACCTATGAATTGACAGCC

hsa-miR-3621 MIMAT0018002 Homo sapiens miR-3621 Targets (miRBase)

Match Rank:8
Score:0.64
Offset:-11
Orientation:forward strand
Alignment:-----------TGACCCAC-
CCTGCAGACCCCGACCCGCG

hsa-miR-4701-3p MIMAT0019799 Homo sapiens miR-4701-3p Targets (miRBase)

Match Rank:9
Score:0.64
Offset:-12
Orientation:forward strand
Alignment:------------TGACCCAC
ACACCACACCCATCACCCAT

hsa-miR-29c* MIMAT0004673 Homo sapiens miR-29c* Targets (miRBase)

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGACCCAC--------------
TGACCGATTTCTCCTGGTGTTC