Information for 8-TGCTGCG (Motif 18)


Reverse Opposite:

p-value:1e-321
log p-value:-7.411e+02
Information Content per bp:1.431
Number of Target Sequences with motif19274.0
Percentage of Target Sequences with motif22.30%
Number of Background Sequences with motif127064.8
Percentage of Background Sequences with motif16.91%
Average Position of motif in Targets151.4 +/- 161.0bp
Average Position of motif in Background137.1 +/- 148.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4530 MIMAT0019069 Homo sapiens miR-4530 Targets (miRBase)

Match Rank:1
Score:0.69
Offset:-11
Orientation:forward strand
Alignment:-----------TGCTGCG
CGCTCCCGTCCTGCTGGG

hsa-miR-4310 MIMAT0016862 Homo sapiens miR-4310 Targets (miRBase)

Match Rank:2
Score:0.68
Offset:-10
Orientation:forward strand
Alignment:----------TGCTGCG
GGGACATGAATGCTGC-

hsa-miR-107 MIMAT0000104 Homo sapiens miR-107 Targets (miRBase)

Match Rank:3
Score:0.68
Offset:-16
Orientation:forward strand
Alignment:----------------TGCTGCG
TGATAGCCCTGTACAATGCTGCT

hsa-miR-103a MIMAT0000101 Homo sapiens miR-103a Targets (miRBase)

Match Rank:4
Score:0.68
Offset:-16
Orientation:forward strand
Alignment:----------------TGCTGCG
TCATAGCCCTGTACAATGCTGCT

hsa-miR-604 MIMAT0003272 Homo sapiens miR-604 Targets (miRBase)

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGCG-----------
AGGCTGCGGAATTCAGGAC

hsa-miR-1184 MIMAT0005829 Homo sapiens miR-1184 Targets (miRBase)

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGCTGCG--------------
CCTGCAGCGACTTGATGGCTTCC

hsa-miR-195 MIMAT0000461 Homo sapiens miR-195 Targets (miRBase)

Match Rank:7
Score:0.67
Offset:-13
Orientation:forward strand
Alignment:-------------TGCTGCG-
GCCAATATTTCTGTGCTGCTA

hsa-miR-497 MIMAT0002820 Homo sapiens miR-497 Targets (miRBase)

Match Rank:8
Score:0.67
Offset:-13
Orientation:forward strand
Alignment:-------------TGCTGCG-
ACAAACCACAGTGTGCTGCTG

hsa-miR-15b MIMAT0000417 Homo sapiens miR-15b Targets (miRBase)

Match Rank:9
Score:0.67
Offset:-14
Orientation:forward strand
Alignment:--------------TGCTGCG-
TGTAAACCATGATGTGCTGCTA

hsa-miR-16 MIMAT0000069 Homo sapiens miR-16 Targets (miRBase)

Match Rank:10
Score:0.67
Offset:-14
Orientation:forward strand
Alignment:--------------TGCTGCG-
CGCCAATATTTACGTGCTGCTA