Information for 5-AATGG (Motif 9)


Reverse Opposite:

p-value:1e-462
log p-value:-1.066e+03
Information Content per bp:1.858
Number of Target Sequences with motif61265.0
Percentage of Target Sequences with motif70.89%
Number of Background Sequences with motif473707.3
Percentage of Background Sequences with motif63.05%
Average Position of motif in Targets161.2 +/- 156.5bp
Average Position of motif in Background134.1 +/- 159.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.99
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4506 MIMAT0019042 Homo sapiens miR-4506 Targets (miRBase)

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AATGG--------------
AAATGGGTGGTCTGAGGCAA

hsa-miR-4694-3p MIMAT0019787 Homo sapiens miR-4694-3p Targets (miRBase)

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AATGG--------------
CAAATGGACAGGATAACACCT

hsa-miR-885-5p MIMAT0004947 Homo sapiens miR-885-5p Targets (miRBase)

Match Rank:3
Score:0.71
Offset:-16
Orientation:forward strand
Alignment:----------------AATGG-
AGAGGCAGGGTAGTGTAATGGA

hsa-miR-660 MIMAT0003338 Homo sapiens miR-660 Targets (miRBase)

Match Rank:4
Score:0.71
Offset:-14
Orientation:forward strand
Alignment:--------------AATGG---
CAACTCCGATATGCAATGGGTA

hsa-miR-4790-3p MIMAT0019962 Homo sapiens miR-4790-3p Targets (miRBase)

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AATGG---------------
TGAATGGTAAAGCGATGTCACA

hsa-miR-522 MIMAT0002868 Homo sapiens miR-522 Targets (miRBase)

Match Rank:6
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AATGG---------------
AAAATGGTTCCCTTTAGAGTGT

hsa-miR-136 MIMAT0000448 Homo sapiens miR-136 Targets (miRBase)

Match Rank:7
Score:0.71
Offset:-15
Orientation:forward strand
Alignment:---------------AATGG---
TCCATCATCAAAACAAATGGAGT

hsa-miR-224* MIMAT0009198 Homo sapiens miR-224* Targets (miRBase)

Match Rank:8
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AATGG----------------
AAAATGGTGCCCTAGTGACTACA

hsa-miR-1246 MIMAT0005898 Homo sapiens miR-1246 Targets (miRBase)

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AATGG--------------
AATGGATTTTTGGAGCAGG

hsa-miR-652 MIMAT0003322 Homo sapiens miR-652 Targets (miRBase)

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AATGG----------------
AATGGCGCCACTAGGGTTGTG