Information for 9-AAATA (Motif 18)


Reverse Opposite:

p-value:1e-45
log p-value:-1.052e+02
Information Content per bp:1.530
Number of Target Sequences with motif26397.0
Percentage of Target Sequences with motif9.21%
Number of Background Sequences with motif217273.0
Percentage of Background Sequences with motif8.42%
Average Position of motif in Targets19.5 +/- 11.4bp
Average Position of motif in Background20.5 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-138-2* MIMAT0004596 Homo sapiens miR-138-2* Targets (miRBase)

Match Rank:1
Score:0.73
Offset:-15
Orientation:forward strand
Alignment:---------------AAATA--
AACCCTGGTGTCGTGAAATAGC

hsa-miR-3671 MIMAT0018094 Homo sapiens miR-3671 Targets (miRBase)

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---AAATA--------------
ATCAAATAAGGACTAGTCTGCA

hsa-miR-3121-3p MIMAT0014983 Homo sapiens miR-3121-3p Targets (miRBase)

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AAATA----------------
TAAATAGAGTAGGCAAAGGACA

hsa-miR-3145-3p MIMAT0015016 Homo sapiens miR-3145-3p Targets (miRBase)

Match Rank:4
Score:0.72
Offset:-16
Orientation:forward strand
Alignment:----------------AAATA---
CAATTCCAAACACTCAAAATATCT

hsa-miR-223* MIMAT0004570 Homo sapiens miR-223* Targets (miRBase)

Match Rank:5
Score:0.64
Offset:-13
Orientation:forward strand
Alignment:-------------AAATA----
AACTCAGCTTGTCAAATACACG

hsa-miR-4517 MIMAT0019054 Homo sapiens miR-4517 Targets (miRBase)

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAATA--------------------
AAATATGATGAAACTCACAGCTGAG

hsa-miR-205* MIMAT0009197 Homo sapiens miR-205* Targets (miRBase)

Match Rank:7
Score:0.57
Offset:-16
Orientation:forward strand
Alignment:----------------AAATA
GAACTTCACTCCACTGAAATC

hsa-miR-607 MIMAT0003275 Homo sapiens miR-607 Targets (miRBase)

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAATA------------
GTTCAAATCCAGATCTATAAC

hsa-miR-4261 MIMAT0016890 Homo sapiens miR-4261 Targets (miRBase)

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AAATA--------
AGGAAACAGGGACCCA

hsa-miR-4678 MIMAT0019762 Homo sapiens miR-4678 Targets (miRBase)

Match Rank:10
Score:0.56
Offset:-13
Orientation:forward strand
Alignment:-------------AAATA----
TCATAAGTCTGAACAATACCTT