Information for 1-CACACACAC (Motif 1)


Reverse Opposite:

p-value:1e-675
log p-value:-1.555e+03
Information Content per bp:1.652
Number of Target Sequences with motif2872.0
Percentage of Target Sequences with motif4.83%
Number of Background Sequences with motif5365.2
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets20.5 +/- 10.2bp
Average Position of motif in Background22.5 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4455 MIMAT0018977 Homo sapiens miR-4455 Targets (miRBase)

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----CACACACAC---
AAAAACACACACACCCT

hsa-miR-3650 MIMAT0018070 Homo sapiens miR-3650 Targets (miRBase)

Match Rank:2
Score:0.74
Offset:-8
Orientation:forward strand
Alignment:--------CACACACAC--
GGACTCTACAGACACACCT

hsa-miR-147 MIMAT0000251 Homo sapiens miR-147 Targets (miRBase)

Match Rank:3
Score:0.71
Offset:-13
Orientation:forward strand
Alignment:-------------CACACACAC
GCAGAAGCATTTCCACACAC--

hsa-miR-574-5p MIMAT0004795 Homo sapiens miR-574-5p Targets (miRBase)

Match Rank:4
Score:0.71
Offset:-11
Orientation:forward strand
Alignment:-----------CACACACAC---
ACACACTCACACACACACACTCA

hsa-miR-603 MIMAT0003271 Homo sapiens miR-603 Targets (miRBase)

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CACACACAC---------------
--CACACACTGCAATTACTTTTGC

hsa-miR-377 MIMAT0000730 Homo sapiens miR-377 Targets (miRBase)

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CACACACAC-----------
ATCACACAAAGGCAACTTTTGT

hsa-miR-297 MIMAT0004450 Homo sapiens miR-297 Targets (miRBase)

Match Rank:7
Score:0.67
Offset:-10
Orientation:forward strand
Alignment:----------CACACACAC--
CATGCACATGCACACATACAT

hsa-miR-329 MIMAT0001629 Homo sapiens miR-329 Targets (miRBase)

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CACACACAC---------------
--AACACACCTGGTTAACCTCTTT

hsa-miR-362-3p MIMAT0004683 Homo sapiens miR-362-3p Targets (miRBase)

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CACACACAC---------------
--AACACACCTATTCAAGGATTCA

hsa-miR-4658 MIMAT0019725 Homo sapiens miR-4658 Targets (miRBase)

Match Rank:10
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------CACACACAC
ATTCCTCCAGGATCCACACTCAC