Information for 1-DTTWDRGGG (Motif 1)


Reverse Opposite:

p-value:1e-717
log p-value:-1.652e+03
Information Content per bp:1.732
Number of Target Sequences with motif35053.0
Percentage of Target Sequences with motif43.44%
Number of Background Sequences with motif239002.7
Percentage of Background Sequences with motif33.18%
Average Position of motif in Targets163.6 +/- 163.6bp
Average Position of motif in Background134.4 +/- 151.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4278 MIMAT0016910 Homo sapiens miR-4278 Targets (miRBase)

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:DTTWDRGGG----------
-CTAGGGGGTTTGCCCTTG

hsa-miR-938 MIMAT0004981 Homo sapiens miR-938 Targets (miRBase)

Match Rank:2
Score:0.60
Offset:-11
Orientation:forward strand
Alignment:-----------DTTWDRGGG--
ACTGGGTTCACCTTTAAGGGCA

hsa-miR-3675-5p MIMAT0018098 Homo sapiens miR-3675-5p Targets (miRBase)

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:DTTWDRGGG----------------
--TATGGGGCTTCTGTAGAGATTTC

hsa-miR-3936 MIMAT0018351 Homo sapiens miR-3936 Targets (miRBase)

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:DTTWDRGGG---------------
--TAAGGGGTGTATGGCAGATGCA

hsa-miR-18b* MIMAT0004751 Homo sapiens miR-18b* Targets (miRBase)

Match Rank:5
Score:0.57
Offset:-11
Orientation:forward strand
Alignment:-----------DTTWDRGGG--
GCCAGAAGGGGCATTTAGGGCA

hsa-miR-135b* MIMAT0004698 Homo sapiens miR-135b* Targets (miRBase)

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:DTTWDRGGG--------------
-ATGTAGGGCTAAAAGCCATGGG

hsa-miR-135a* MIMAT0004595 Homo sapiens miR-135a* Targets (miRBase)

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:DTTWDRGGG---------------
--TATAGGGATTGGAGCCGTGGCG

hsa-miR-365 MIMAT0000710 Homo sapiens miR-365 Targets (miRBase)

Match Rank:8
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------DTTWDRGGG-----
ATAAGGATTTTTAGGGGCATTA

hsa-miR-4727-3p MIMAT0019848 Homo sapiens miR-4727-3p Targets (miRBase)

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:DTTWDRGGG--------------
-ATAGTGGGAAGCTGGCAGATTC

hsa-miR-4301 MIMAT0016850 Homo sapiens miR-4301 Targets (miRBase)

Match Rank:10
Score:0.55
Offset:-10
Orientation:forward strand
Alignment:----------DTTWDRGGG-
TCACAAGTGAAGTAGTGGGA