Information for 3-CACMCACMCM (Motif 4)


Reverse Opposite:

p-value:1e-468
log p-value:-1.079e+03
Information Content per bp:1.457
Number of Target Sequences with motif4643.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif18308.1
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets21.0 +/- 9.7bp
Average Position of motif in Background22.5 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4455 MIMAT0018977 Homo sapiens miR-4455 Targets (miRBase)

Match Rank:1
Score:0.75
Offset:-7
Orientation:forward strand
Alignment:-------CACMCACMCM
AAAAACACACACACCCT

hsa-miR-4651 MIMAT0019715 Homo sapiens miR-4651 Targets (miRBase)

Match Rank:2
Score:0.68
Offset:-9
Orientation:forward strand
Alignment:---------CACMCACMCM-
GCCCGACCTCACCCACCCCG

hsa-miR-574-5p MIMAT0004795 Homo sapiens miR-574-5p Targets (miRBase)

Match Rank:3
Score:0.66
Offset:-13
Orientation:forward strand
Alignment:-------------CACMCACMCM
ACACACTCACACACACACACTCA

hsa-miR-3650 MIMAT0018070 Homo sapiens miR-3650 Targets (miRBase)

Match Rank:4
Score:0.64
Offset:-8
Orientation:forward strand
Alignment:--------CACMCACMCM-
GGACTCTACAGACACACCT

hsa-miR-147 MIMAT0000251 Homo sapiens miR-147 Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-13
Orientation:forward strand
Alignment:-------------CACMCACMCM
GCAGAAGCATTTCCACACAC---

hsa-miR-210 MIMAT0000267 Homo sapiens miR-210 Targets (miRBase)

Match Rank:6
Score:0.63
Offset:-11
Orientation:forward strand
Alignment:-----------CACMCACMCM-
TCAGCCGCTGTCACACGCACAG

hsa-miR-3656 MIMAT0018076 Homo sapiens miR-3656 Targets (miRBase)

Match Rank:7
Score:0.62
Offset:-9
Orientation:forward strand
Alignment:---------CACMCACMCM
CCACCCCCGCACCCGCC--

hsa-miR-532-3p MIMAT0004780 Homo sapiens miR-532-3p Targets (miRBase)

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACMCACMCM-----------
CCTCCCACACCCAAGGCTTGCA

hsa-miR-362-3p MIMAT0004683 Homo sapiens miR-362-3p Targets (miRBase)

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACMCACMCM------------
AACACACCTATTCAAGGATTCA

hsa-miR-4447 MIMAT0018966 Homo sapiens miR-4447 Targets (miRBase)

Match Rank:10
Score:0.58
Offset:-9
Orientation:forward strand
Alignment:---------CACMCACMCM
AAACAACAGCCCCCACC--