Information for 6-AGCSGCTG (Motif 21)


Reverse Opposite:

p-value:1e-249
log p-value:-5.751e+02
Information Content per bp:1.648
Number of Target Sequences with motif42095.0
Percentage of Target Sequences with motif48.71%
Number of Background Sequences with motif320592.2
Percentage of Background Sequences with motif42.67%
Average Position of motif in Targets157.6 +/- 159.9bp
Average Position of motif in Background134.7 +/- 150.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.55
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-646 MIMAT0003316 Homo sapiens miR-646 Targets (miRBase)

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGCSGCTG----------
AAGCAGCTGCCTCTGAGGC

hsa-miR-3648 MIMAT0018068 Homo sapiens miR-3648 Targets (miRBase)

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGCSGCTG-------------
AGCCGCGGGGATCGCCGAGGG

hsa-miR-558 MIMAT0003222 Homo sapiens miR-558 Targets (miRBase)

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGCSGCTG---------
TGAGCTGCTGTACCAAAAT

hsa-miR-3960 MIMAT0019337 Homo sapiens miR-3960 Targets (miRBase)

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCSGCTG------------
GGCGGCGGCGGAGGCGGGGG

hsa-miR-5047 MIMAT0020541 Homo sapiens miR-5047 Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGCSGCTG------------
TTGCAGCTGCGGTTGTAAGGT

hsa-miR-1301 MIMAT0005797 Homo sapiens miR-1301 Targets (miRBase)

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCSGCTG---------------
TTGCAGCTGCCTGGGAGTGACTTC

hsa-miR-4479 MIMAT0019011 Homo sapiens miR-4479 Targets (miRBase)

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGCSGCTG------------
CGCGCGGCCGTGCTCGGAGCAG

hsa-miR-4524 MIMAT0019062 Homo sapiens miR-4524 Targets (miRBase)

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGCSGCTG------------
ATAGCAGCATGAACCTGTCTCA

hsa-miR-503 MIMAT0002874 Homo sapiens miR-503 Targets (miRBase)

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGCSGCTG--------------
TAGCAGCGGGAACAGTTCTGCAG

hsa-miR-497 MIMAT0002820 Homo sapiens miR-497 Targets (miRBase)

Match Rank:10
Score:0.60
Offset:-13
Orientation:forward strand
Alignment:-------------AGCSGCTG
ACAAACCACAGTGTGCTGCTG