Information for 2-GADGADGAG (Motif 2)


Reverse Opposite:

p-value:1e-85
log p-value:-1.968e+02
Information Content per bp:1.484
Number of Target Sequences with motif2525.0
Percentage of Target Sequences with motif26.27%
Number of Background Sequences with motif14105.1
Percentage of Background Sequences with motif17.68%
Average Position of motif in Targets30.8 +/- 18.2bp
Average Position of motif in Background27.8 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4268 MIMAT0016896 Homo sapiens miR-4268 Targets (miRBase)

Match Rank:1
Score:0.68
Offset:-10
Orientation:forward strand
Alignment:----------GADGADGAG--
CACATCCTGAGAGGAGGAGCC

hsa-miR-1236 MIMAT0005591 Homo sapiens miR-1236 Targets (miRBase)

Match Rank:2
Score:0.67
Offset:-12
Orientation:forward strand
Alignment:------------GADGADGAG-
CTGGAGAGACAAGGGGAAGAGG

hsa-miR-877* MIMAT0004950 Homo sapiens miR-877* Targets (miRBase)

Match Rank:3
Score:0.66
Offset:-10
Orientation:forward strand
Alignment:----------GADGADGAG--
CTGGGAGGAGGGAGAAGAGGA

hsa-miR-4778-3p MIMAT0019937 Homo sapiens miR-4778-3p Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-14
Orientation:forward strand
Alignment:--------------GADGADGAG
TCAACTCTGCAAAGGAAGAAGA-

hsa-miR-1255a MIMAT0005906 Homo sapiens miR-1255a Targets (miRBase)

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GADGADGAG---------------
-AGGATGAGCAAAGAAAGTAGATT

hsa-miR-4279 MIMAT0016909 Homo sapiens miR-4279 Targets (miRBase)

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GADGADGAG--
GAAGCCGGGAGGAGAG

hsa-miR-1238 MIMAT0005593 Homo sapiens miR-1238 Targets (miRBase)

Match Rank:7
Score:0.60
Offset:-10
Orientation:forward strand
Alignment:----------GADGADGAG-
GGGGCAGACAGACGAGGAAG

hsa-miR-765 MIMAT0003945 Homo sapiens miR-765 Targets (miRBase)

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GADGADGAG-------------
-TGGAGGAGAAGGAAGGTGATG

hsa-miR-4784 MIMAT0019948 Homo sapiens miR-4784 Targets (miRBase)

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GADGADGAG-------------
--TGAGGAGATGCTGGGACTGA

hsa-miR-4659b-3p MIMAT0019734 Homo sapiens miR-4659b-3p Targets (miRBase)

Match Rank:10
Score:0.59
Offset:-12
Orientation:forward strand
Alignment:------------GADGADGAG-
AGCTGCCATGTCTAAGAAGAAA