Information for 3-GTDTAGA (Motif 4)


Reverse Opposite:

p-value:1e-736
log p-value:-1.696e+03
Information Content per bp:1.784
Number of Target Sequences with motif25877.0
Percentage of Target Sequences with motif29.94%
Number of Background Sequences with motif157815.7
Percentage of Background Sequences with motif21.01%
Average Position of motif in Targets165.0 +/- 156.1bp
Average Position of motif in Background133.9 +/- 164.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3911 MIMAT0018185 Homo sapiens miR-3911 Targets (miRBase)

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTDTAGA--------------
TGTGTGGATCCTGGAGGAGGCA

hsa-miR-1284 MIMAT0005941 Homo sapiens miR-1284 Targets (miRBase)

Match Rank:2
Score:0.71
Offset:-15
Orientation:forward strand
Alignment:---------------GTDTAGA
GAAAAGCCAGGGTCTGTATAGA

hsa-miR-147 MIMAT0000251 Homo sapiens miR-147 Targets (miRBase)

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTDTAGA-----------
GTGTGTGGAAATGCTTCTGC

hsa-miR-4796-5p MIMAT0019970 Homo sapiens miR-4796-5p Targets (miRBase)

Match Rank:4
Score:0.68
Offset:-13
Orientation:forward strand
Alignment:-------------GTDTAGA--
GTAAAGTGACAGAGTATAGACA

hsa-miR-2052 MIMAT0009977 Homo sapiens miR-2052 Targets (miRBase)

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTDTAGA------------
TGTTTTGATAACAGTAATGT

hsa-miR-4280 MIMAT0016911 Homo sapiens miR-4280 Targets (miRBase)

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTDTAGA------------
GAGTGTAGTTCTGAGCAGAGC

hsa-miR-3692 MIMAT0018122 Homo sapiens miR-3692 Targets (miRBase)

Match Rank:7
Score:0.62
Offset:-15
Orientation:forward strand
Alignment:---------------GTDTAGA--
ACTTCTGCAGTGTCAGTGTGGAAC

hsa-miR-4305 MIMAT0016857 Homo sapiens miR-4305 Targets (miRBase)

Match Rank:8
Score:0.62
Offset:-11
Orientation:forward strand
Alignment:-----------GTDTAGA
GAACTGGAGGTGTCTAGG

hsa-miR-601 MIMAT0003269 Homo sapiens miR-601 Targets (miRBase)

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTDTAGA-------------
TGGTCTAGGATTGTTGGAGGAG

hsa-miR-644 MIMAT0003314 Homo sapiens miR-644 Targets (miRBase)

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTDTAGA-----------
AGTGTGGCTTTCTTAGAGC