Information for 15-CACCACCACC (Motif 34)


Reverse Opposite:

p-value:1e-39
log p-value:-9.189e+01
Information Content per bp:1.872
Number of Target Sequences with motif13276.0
Percentage of Target Sequences with motif16.45%
Number of Background Sequences with motif105726.6
Percentage of Background Sequences with motif14.68%
Average Position of motif in Targets182.7 +/- 205.6bp
Average Position of motif in Background135.7 +/- 143.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-197 MIMAT0000227 Homo sapiens miR-197 Targets (miRBase)

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CACCACCACC----------
TTCACCACCTTCTCCACCCAGC

hsa-miR-138 MIMAT0000430 Homo sapiens miR-138 Targets (miRBase)

Match Rank:2
Score:0.67
Offset:-12
Orientation:forward strand
Alignment:------------CACCACCACC-
CGGCCTGATTCACAACACCAGCT

hsa-miR-634 MIMAT0003304 Homo sapiens miR-634 Targets (miRBase)

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CACCACCACC------------
AACCAGCACCCCAACTTTGGAC

hsa-miR-608 MIMAT0003276 Homo sapiens miR-608 Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-12
Orientation:forward strand
Alignment:------------CACCACCACC---
ACGGAGCTGTCCCAACACCACCCCT

hsa-miR-1273g MIMAT0020602 Homo sapiens miR-1273g Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-12
Orientation:forward strand
Alignment:------------CACCACCACC
ACTTACTGCAGCCTCAACCACC

hsa-miR-4483 MIMAT0019017 Homo sapiens miR-4483 Targets (miRBase)

Match Rank:6
Score:0.62
Offset:-8
Orientation:forward strand
Alignment:--------CACCACCACC
CAACAACAGACCACCCC-

hsa-miR-29a MIMAT0000086 Homo sapiens miR-29a Targets (miRBase)

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACCACCACC------------
TAGCACCATCTGAAATCGGTTA

hsa-miR-876-3p MIMAT0004925 Homo sapiens miR-876-3p Targets (miRBase)

Match Rank:8
Score:0.62
Offset:-14
Orientation:forward strand
Alignment:--------------CACCACCACC
TGAATTACTTTGTAAACCACCA--

hsa-miR-21* MIMAT0004494 Homo sapiens miR-21* Targets (miRBase)

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACCACCACC-----------
CAACACCAGTCGATGGGCTGT

hsa-miR-1293 MIMAT0005883 Homo sapiens miR-1293 Targets (miRBase)

Match Rank:10
Score:0.61
Offset:-10
Orientation:forward strand
Alignment:----------CACCACCACC--
GCACAAATCTCCAGACCACCCA