Information for 11-AGCAGCAGC (Motif 14)


Reverse Opposite:

p-value:1e-14
log p-value:-3.313e+01
Information Content per bp:1.625
Number of Target Sequences with motif279.0
Percentage of Target Sequences with motif3.26%
Number of Background Sequences with motif1373.9
Percentage of Background Sequences with motif1.91%
Average Position of motif in Targets29.4 +/- 19.1bp
Average Position of motif in Background28.8 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-195 MIMAT0000461 Homo sapiens miR-195 Targets (miRBase)

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCAGC-----------
TAGCAGCACAGAAATATTGGC

hsa-miR-497 MIMAT0002820 Homo sapiens miR-497 Targets (miRBase)

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCAGC-----------
CAGCAGCACACTGTGGTTTGT

hsa-miR-15b MIMAT0000417 Homo sapiens miR-15b Targets (miRBase)

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCAGC------------
TAGCAGCACATCATGGTTTACA

hsa-miR-15a MIMAT0000068 Homo sapiens miR-15a Targets (miRBase)

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCAGC------------
TAGCAGCACATAATGGTTTGTG

hsa-miR-16 MIMAT0000069 Homo sapiens miR-16 Targets (miRBase)

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCAGC------------
TAGCAGCACGTAAATATTGGCG

hsa-miR-424 MIMAT0001341 Homo sapiens miR-424 Targets (miRBase)

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCAGC------------
CAGCAGCAATTCATGTTTTGAA

hsa-miR-646 MIMAT0003316 Homo sapiens miR-646 Targets (miRBase)

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCAGC---------
AAGCAGCTGCCTCTGAGGC

hsa-miR-634 MIMAT0003304 Homo sapiens miR-634 Targets (miRBase)

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCAGC------------
AACCAGCACCCCAACTTTGGAC

hsa-miR-3692* MIMAT0018121 Homo sapiens miR-3692* Targets (miRBase)

Match Rank:9
Score:0.68
Offset:-15
Orientation:forward strand
Alignment:---------------AGCAGCAGC
CAGTATCCACTCCTGACCAGCAGG

hsa-miR-298 MIMAT0004901 Homo sapiens miR-298 Targets (miRBase)

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGCAGCAGC---------------
AGCAGAAGCAGGGAGGTTCTCCCA