Information for 7-TGTCT (Motif 12)


Reverse Opposite:

p-value:1e-30
log p-value:-7.120e+01
Information Content per bp:1.929
Number of Target Sequences with motif5393.0
Percentage of Target Sequences with motif9.06%
Number of Background Sequences with motif34660.0
Percentage of Background Sequences with motif7.67%
Average Position of motif in Targets16.8 +/- 10.8bp
Average Position of motif in Background20.2 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4288 MIMAT0016918 Homo sapiens miR-4288 Targets (miRBase)

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TGTCT-----------
TTGTCTGCTGAGTTTCC

hsa-miR-4305 MIMAT0016857 Homo sapiens miR-4305 Targets (miRBase)

Match Rank:2
Score:0.74
Offset:-10
Orientation:forward strand
Alignment:----------TGTCT---
GAACTGGAGGTGTCTAGG

hsa-miR-4711-3p MIMAT0019817 Homo sapiens miR-4711-3p Targets (miRBase)

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TGTCT-----------
CGTGTCTTCTGGCTTGAT

hsa-miR-632 MIMAT0003302 Homo sapiens miR-632 Targets (miRBase)

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGTCT-------------
GTGTCTGCTTCCTGTGGGA

hsa-miR-626 MIMAT0003295 Homo sapiens miR-626 Targets (miRBase)

Match Rank:5
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TGTCT-----------
AGCTGTCTGAAAATGTCTT

hsa-miR-1231 MIMAT0005586 Homo sapiens miR-1231 Targets (miRBase)

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGTCT--------------
GTGTCTGGGCGGACAGCTGC

hsa-miR-511 MIMAT0002808 Homo sapiens miR-511 Targets (miRBase)

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGTCT---------------
GTGTCTTTTGCTCTGCAGTCA

hsa-miR-3120-5p MIMAT0019198 Homo sapiens miR-3120-5p Targets (miRBase)

Match Rank:8
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGTCT--------------
CCTGTCTGTGCCTGCTGTACA

hsa-miR-4524* MIMAT0019063 Homo sapiens miR-4524* Targets (miRBase)

Match Rank:9
Score:0.71
Offset:-15
Orientation:forward strand
Alignment:---------------TGTCT--
ATAGCAGCATAAGCCTGTCTCA

hsa-miR-3617 MIMAT0017997 Homo sapiens miR-3617 Targets (miRBase)

Match Rank:10
Score:0.71
Offset:-15
Orientation:forward strand
Alignment:---------------TGTCT--
CCCATCTTGCAACTATGTCTTT