Information for 4-YCAGCY (Motif 11)


Reverse Opposite:

p-value:1e-255
log p-value:-5.891e+02
Information Content per bp:1.658
Number of Target Sequences with motif28732.0
Percentage of Target Sequences with motif10.03%
Number of Background Sequences with motif209501.9
Percentage of Background Sequences with motif8.12%
Average Position of motif in Targets20.2 +/- 10.9bp
Average Position of motif in Background21.1 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4267 MIMAT0016893 Homo sapiens miR-4267 Targets (miRBase)

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-YCAGCY---------
TCCAGCTCGGTGGCAC

hsa-miR-4492 MIMAT0019027 Homo sapiens miR-4492 Targets (miRBase)

Match Rank:2
Score:0.69
Offset:-9
Orientation:forward strand
Alignment:---------YCAGCY--
GGCGCGCGCCCAGCCCC

hsa-miR-4505 MIMAT0019041 Homo sapiens miR-4505 Targets (miRBase)

Match Rank:3
Score:0.69
Offset:-11
Orientation:forward strand
Alignment:-----------YCAGCY-
TCCGTCCCAGCCCAGCCT

hsa-miR-3652 MIMAT0018072 Homo sapiens miR-3652 Targets (miRBase)

Match Rank:4
Score:0.69
Offset:-11
Orientation:forward strand
Alignment:-----------YCAGCY-
TCCTCACACCTCCAGCCG

hsa-miR-4430 MIMAT0018945 Homo sapiens miR-4430 Targets (miRBase)

Match Rank:5
Score:0.69
Offset:-11
Orientation:forward strand
Alignment:-----------YCAGCY-
CTCCGCTCACTCCAGCCT

hsa-miR-320e MIMAT0015072 Homo sapiens miR-320e Targets (miRBase)

Match Rank:6
Score:0.68
Offset:-10
Orientation:forward strand
Alignment:----------YCAGCY--
CCTTCTCAACCCAGCTTT

hsa-miR-1207-3p MIMAT0005872 Homo sapiens miR-1207-3p Targets (miRBase)

Match Rank:7
Score:0.68
Offset:-10
Orientation:forward strand
Alignment:----------YCAGCY--
GAAATGAGGGCCAGCTGA

hsa-miR-4487 MIMAT0019021 Homo sapiens miR-4487 Targets (miRBase)

Match Rank:8
Score:0.68
Offset:-11
Orientation:forward strand
Alignment:-----------YCAGCY--
CTGCCCTTCAGCCAGCTCT

hsa-miR-4478 MIMAT0019006 Homo sapiens miR-4478 Targets (miRBase)

Match Rank:9
Score:0.67
Offset:-9
Orientation:forward strand
Alignment:---------YCAGCY--
CTCCTCAGCTCAGCCTC

hsa-miR-3194-5p MIMAT0015078 Homo sapiens miR-3194-5p Targets (miRBase)

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--YCAGCY-------------
GGCCAGCCACCAGGAGGGCTG