Information for 6-CACAMYACAC (Motif 7)


Reverse Opposite:

p-value:1e-32
log p-value:-7.471e+01
Information Content per bp:1.907
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif83.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets38.6 +/- 26.5bp
Average Position of motif in Background23.4 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-323-3p MIMAT0000755 Homo sapiens miR-323-3p Targets (miRBase)

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CACAMYACAC-----------
CACATTACACGGTCGACCTCT

hsa-miR-4711-3p MIMAT0019817 Homo sapiens miR-4711-3p Targets (miRBase)

Match Rank:2
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------CACAMYACAC-
ATCAAGCCAGAAGACACG

hsa-miR-142-3p MIMAT0000434 Homo sapiens miR-142-3p Targets (miRBase)

Match Rank:3
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------CACAMYACAC
TCCATAAAGTAGGAAACACTACA-

hsa-miR-497* MIMAT0004768 Homo sapiens miR-497* Targets (miRBase)

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACAMYACAC------------
CAAACCACACTGTGGTGTTAGA

hsa-miR-187 MIMAT0000262 Homo sapiens miR-187 Targets (miRBase)

Match Rank:5
Score:0.62
Offset:-10
Orientation:forward strand
Alignment:----------CACAMYACAC--
CCGGCTGCAACACAAGACACGA

hsa-miR-323b-3p MIMAT0015050 Homo sapiens miR-323b-3p Targets (miRBase)

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACAMYACAC------------
CCCAATACACGGTCGACCTCTT

hsa-miR-595 MIMAT0003263 Homo sapiens miR-595 Targets (miRBase)

Match Rank:7
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------CACAMYACAC---
AGACACACCACGGCACACTTC

hsa-miR-499-3p MIMAT0004772 Homo sapiens miR-499-3p Targets (miRBase)

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACAMYACAC------------
AACATCACAGCAAGTCTGTGCT

hsa-miR-4483 MIMAT0019017 Homo sapiens miR-4483 Targets (miRBase)

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CACAMYACAC-
CAACAACAGACCACCCC

hsa-miR-3940-5p MIMAT0019229 Homo sapiens miR-3940-5p Targets (miRBase)

Match Rank:10
Score:0.57
Offset:-10
Orientation:forward strand
Alignment:----------CACAMYACAC
CAGAGCCCGCCCCAACCCAC