Information for 1-AAAAAAAA (Motif 2)


Reverse Opposite:

p-value:1e-600
log p-value:-1.382e+03
Information Content per bp:1.817
Number of Target Sequences with motif6066.0
Percentage of Target Sequences with motif10.20%
Number of Background Sequences with motif20671.2
Percentage of Background Sequences with motif4.58%
Average Position of motif in Targets20.7 +/- 6.3bp
Average Position of motif in Background21.0 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3613-3p MIMAT0017991 Homo sapiens miR-3613-3p Targets (miRBase)

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--AAAAAAAA--------------
ACAAAAAAAAAAGCCCAACCCTTC

hsa-miR-4307 MIMAT0016860 Homo sapiens miR-4307 Targets (miRBase)

Match Rank:2
Score:0.65
Offset:-9
Orientation:forward strand
Alignment:---------AAAAAAAA--
GGAAACAGGAAAAAACATT

hsa-miR-4668-5p MIMAT0019745 Homo sapiens miR-4668-5p Targets (miRBase)

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AAAAAAAA-----------
AGGGAAAAAAAAAAGGATTTGTC

hsa-miR-3148 MIMAT0015021 Homo sapiens miR-3148 Targets (miRBase)

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAAAAAAA------------
TGGAAAAAACTGGTGTGTGCTT

hsa-miR-495 MIMAT0002817 Homo sapiens miR-495 Targets (miRBase)

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAAAAAAA---------------
-AAACAAACATGGTGCACTTCTT

hsa-miR-3065-5p MIMAT0015066 Homo sapiens miR-3065-5p Targets (miRBase)

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAAAA--------------
TCAACAAAATCACTGATGCTGGA

hsa-miR-129-5p MIMAT0000242 Homo sapiens miR-129-5p Targets (miRBase)

Match Rank:7
Score:0.59
Offset:-14
Orientation:forward strand
Alignment:--------------AAAAAAAA
GCAAGCCCAGACCGCAAAAAG-

hsa-miR-548c-3p MIMAT0003285 Homo sapiens miR-548c-3p Targets (miRBase)

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAAAAAAA---------------
-CAAAAATCTCAATTACTTTTGC

hsa-miR-548x MIMAT0015081 Homo sapiens miR-548x Targets (miRBase)

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAAAAAAA-------------
-TAAAAACTGCAATTACTTTC

hsa-miR-548ae MIMAT0018954 Homo sapiens miR-548ae Targets (miRBase)

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAAAAAAA--------------
-CAAAAACTGCAATTACTTTCA