Information for 8-AGGCSTSA (Motif 24)


Reverse Opposite:

p-value:1e-222
log p-value:-5.115e+02
Information Content per bp:1.697
Number of Target Sequences with motif22086.0
Percentage of Target Sequences with motif25.55%
Number of Background Sequences with motif156111.1
Percentage of Background Sequences with motif20.78%
Average Position of motif in Targets154.3 +/- 158.6bp
Average Position of motif in Background135.4 +/- 149.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4650-5p MIMAT0019713 Homo sapiens miR-4650-5p Targets (miRBase)

Match Rank:1
Score:0.76
Offset:-11
Orientation:forward strand
Alignment:-----------AGGCSTSA
AAGGTAGAAAGAGGCCTGA

hsa-miR-4649-3p MIMAT0019712 Homo sapiens miR-4649-3p Targets (miRBase)

Match Rank:2
Score:0.69
Offset:-11
Orientation:forward strand
Alignment:-----------AGGCSTSA--
TGGGGAGAGGCAGGCCTCAGA

hsa-miR-3186-5p MIMAT0015067 Homo sapiens miR-3186-5p Targets (miRBase)

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGGCSTSA-------------
CAGGCGTCTGTCTACGTGGCTT

hsa-miR-1245b-5p MIMAT0019950 Homo sapiens miR-1245b-5p Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-14
Orientation:forward strand
Alignment:--------------AGGCSTSA
TTTAAGTGATCTAAAGGCCTA-

hsa-miR-3142 MIMAT0015011 Homo sapiens miR-3142 Targets (miRBase)

Match Rank:5
Score:0.64
Offset:-15
Orientation:forward strand
Alignment:---------------AGGCSTSA
TCTGAAGGTTCAGAAAGGCCTT-

hsa-miR-1224-5p MIMAT0005458 Homo sapiens miR-1224-5p Targets (miRBase)

Match Rank:6
Score:0.64
Offset:-10
Orientation:forward strand
Alignment:----------AGGCSTSA-
CCACCTCCCGAGTCCTCAC

hsa-miR-5095 MIMAT0020600 Homo sapiens miR-5095 Targets (miRBase)

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGGCSTSA---------
TTACAGGCGTGAACCACCGCG

hsa-miR-3910 MIMAT0018184 Homo sapiens miR-3910 Targets (miRBase)

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGGCSTSA----------
AAAGGCATAAAACCAAGACA

hsa-miR-4484 MIMAT0019018 Homo sapiens miR-4484 Targets (miRBase)

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGGCSTSA---------
AAAAGGCGGGAGAAGCCCCA

hsa-miR-1234 MIMAT0005589 Homo sapiens miR-1234 Targets (miRBase)

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGGCSTSA-------------
TCGGCCTGACCACCCACCCCAC