Information for 9-TACCCCC (Motif 11)


Reverse Opposite:

p-value:1e-17
log p-value:-4.103e+01
Information Content per bp:1.566
Number of Target Sequences with motif996.0
Percentage of Target Sequences with motif11.64%
Number of Background Sequences with motif6256.4
Percentage of Background Sequences with motif8.69%
Average Position of motif in Targets27.9 +/- 22.0bp
Average Position of motif in Background27.4 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-625 MIMAT0003294 Homo sapiens miR-625 Targets (miRBase)

Match Rank:1
Score:0.72
Offset:-13
Orientation:forward strand
Alignment:-------------TACCCCC-
GGACTATAGAACTTTCCCCCT

hsa-miR-3679-3p MIMAT0018105 Homo sapiens miR-3679-3p Targets (miRBase)

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TACCCCC--------------
CTTCCCCCCAGTAATCTTCATC

hsa-miR-4787-5p MIMAT0019956 Homo sapiens miR-4787-5p Targets (miRBase)

Match Rank:3
Score:0.70
Offset:-13
Orientation:forward strand
Alignment:-------------TACCCCC--
GGGATGCCGCCGCCACCCCCGC

hsa-miR-4640-3p MIMAT0019700 Homo sapiens miR-4640-3p Targets (miRBase)

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TACCCCC---------------
CACCCCCTGTTTCCTGGCCCAC

hsa-miR-4489 MIMAT0019023 Homo sapiens miR-4489 Targets (miRBase)

Match Rank:5
Score:0.69
Offset:-13
Orientation:forward strand
Alignment:-------------TACCCCC-
CGTCCTGCATCACTAGCCCCA

hsa-miR-585 MIMAT0003250 Homo sapiens miR-585 Targets (miRBase)

Match Rank:6
Score:0.68
Offset:-11
Orientation:forward strand
Alignment:-----------TACCCCC-
TAGCATACAGATACGCCCA

hsa-miR-4271 MIMAT0016901 Homo sapiens miR-4271 Targets (miRBase)

Match Rank:7
Score:0.66
Offset:-12
Orientation:forward strand
Alignment:------------TACCCCC
CCCCACCTTTTCTTCCCCC

hsa-miR-4278 MIMAT0016910 Homo sapiens miR-4278 Targets (miRBase)

Match Rank:8
Score:0.65
Offset:-8
Orientation:forward strand
Alignment:--------TACCCCC---
CAAGGGCAAACCCCCTAG

hsa-miR-4525 MIMAT0019064 Homo sapiens miR-4525 Targets (miRBase)

Match Rank:9
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------TACCCCC
AACCAGCATGCACATCCCCCC

hsa-miR-4716-3p MIMAT0019827 Homo sapiens miR-4716-3p Targets (miRBase)

Match Rank:10
Score:0.63
Offset:-13
Orientation:forward strand
Alignment:-------------TACCCCC--
TCTCCATGTTTCCTTCCCCCTT