Information for 12-YTWKGKBK (Motif 9)


Reverse Opposite:

p-value:1e-20
log p-value:-4.645e+01
Information Content per bp:1.421
Number of Target Sequences with motif1045.0
Percentage of Target Sequences with motif12.22%
Number of Background Sequences with motif6482.2
Percentage of Background Sequences with motif9.00%
Average Position of motif in Targets26.2 +/- 15.4bp
Average Position of motif in Background28.9 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-186* MIMAT0004612 Homo sapiens miR-186* Targets (miRBase)

Match Rank:1
Score:0.52
Offset:-15
Orientation:forward strand
Alignment:---------------YTWKGKBK
CCCAAAAAATTCACCTTTGGGC-

hsa-miR-584 MIMAT0003249 Homo sapiens miR-584 Targets (miRBase)

Match Rank:2
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:YTWKGKBK--------------
TTATGGTTTGCCTGGGACTGAG

hsa-miR-3065-5p MIMAT0015066 Homo sapiens miR-3065-5p Targets (miRBase)

Match Rank:3
Score:0.50
Offset:-14
Orientation:forward strand
Alignment:--------------YTWKGKBK-
TCCAGCATCAGTGATTTTGTTGA

hsa-miR-3145-5p MIMAT0019205 Homo sapiens miR-3145-5p Targets (miRBase)

Match Rank:4
Score:0.50
Offset:-13
Orientation:forward strand
Alignment:-------------YTWKGKBK-
TGAGTTTTGAGTGTTTGGAGTT

hsa-miR-9 MIMAT0000441 Homo sapiens miR-9 Targets (miRBase)

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-YTWKGKBK--------------
TCTTTGGTTATCTAGCTGTATGA

hsa-miR-888 MIMAT0004916 Homo sapiens miR-888 Targets (miRBase)

Match Rank:6
Score:0.50
Offset:-12
Orientation:forward strand
Alignment:------------YTWKGKBK-
TGACTGACAGCTTTTTGAGTA

hsa-miR-4789-3p MIMAT0019960 Homo sapiens miR-4789-3p Targets (miRBase)

Match Rank:7
Score:0.50
Offset:-12
Orientation:forward strand
Alignment:------------YTWKGKBK-
TATATACACCTGCTATGTGTG

hsa-miR-4278 MIMAT0016910 Homo sapiens miR-4278 Targets (miRBase)

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:YTWKGKBK----------
CTAGGGGGTTTGCCCTTG

hsa-miR-371b-5p MIMAT0019892 Homo sapiens miR-371b-5p Targets (miRBase)

Match Rank:9
Score:0.49
Offset:-14
Orientation:forward strand
Alignment:--------------YTWKGKBK
AAAGTGCCGCCATCTTTTGAGT

hsa-miR-373* MIMAT0000725 Homo sapiens miR-373* Targets (miRBase)

Match Rank:10
Score:0.49
Offset:-14
Orientation:forward strand
Alignment:--------------YTWKGKBK
GGAAAGCGCCCCCATTTTGAGT