Information for 6-TAMCGCA (Motif 12)


Reverse Opposite:

p-value:1e-403
log p-value:-9.294e+02
Information Content per bp:1.747
Number of Target Sequences with motif61474.0
Percentage of Target Sequences with motif71.13%
Number of Background Sequences with motif479664.0
Percentage of Background Sequences with motif63.85%
Average Position of motif in Targets156.7 +/- 152.5bp
Average Position of motif in Background133.3 +/- 156.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.71
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3912 MIMAT0018186 Homo sapiens miR-3912 Targets (miRBase)

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TAMCGCA--------------
TAACGCATAATATGGACATGT

hsa-miR-3120-3p MIMAT0014982 Homo sapiens miR-3120-3p Targets (miRBase)

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TAMCGCA--------------
CACAGCAAGTGTAGACAGGCA

hsa-miR-4422 MIMAT0018935 Homo sapiens miR-4422 Targets (miRBase)

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TAMCGCA--------------
AAAAGCATCAGGAAGTACCCA

hsa-miR-509-5p MIMAT0004779 Homo sapiens miR-509-5p Targets (miRBase)

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAMCGCA--------------
TACTGCAGACAGTGGCAATCA

hsa-miR-4777-3p MIMAT0019935 Homo sapiens miR-4777-3p Targets (miRBase)

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAMCGCA--------------
ATACCTCATCTAGAATGCTGTA

hsa-miR-509-3-5p MIMAT0004975 Homo sapiens miR-509-3-5p Targets (miRBase)

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TAMCGCA---------------
TACTGCAGACGTGGCAATCATG

hsa-miR-217 MIMAT0000274 Homo sapiens miR-217 Targets (miRBase)

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TAMCGCA----------------
TACTGCATCAGGAACTGATTGGA

hsa-miR-4718 MIMAT0019831 Homo sapiens miR-4718 Targets (miRBase)

Match Rank:8
Score:0.60
Offset:-14
Orientation:forward strand
Alignment:--------------TAMCGCA
TGCTTGGTTTCAGGTACAGCT

hsa-miR-124 MIMAT0000422 Homo sapiens miR-124 Targets (miRBase)

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TAMCGCA-------------
TAAGGCACGCGGTGAATGCC

hsa-miR-506 MIMAT0002878 Homo sapiens miR-506 Targets (miRBase)

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAMCGCA--------------
TAAGGCACCCTTCTGAGTAGA