Information for 5-TGTTT (Motif 15)


Reverse Opposite:

p-value:1e-14
log p-value:-3.309e+01
Information Content per bp:1.898
Number of Target Sequences with motif1411.0
Percentage of Target Sequences with motif16.49%
Number of Background Sequences with motif9627.3
Percentage of Background Sequences with motif13.37%
Average Position of motif in Targets23.2 +/- 15.4bp
Average Position of motif in Background27.9 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4261 MIMAT0016890 Homo sapiens miR-4261 Targets (miRBase)

Match Rank:1
Score:0.76
Offset:-8
Orientation:forward strand
Alignment:--------TGTTT---
TGGGTCCCTGTTTCCT

hsa-miR-4307 MIMAT0016860 Homo sapiens miR-4307 Targets (miRBase)

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TGTTT------------
AATGTTTTTTCCTGTTTCC

hsa-miR-3676 MIMAT0018100 Homo sapiens miR-3676 Targets (miRBase)

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TGTTT------------
CCGTGTTTCCCCCACGCTTT

hsa-miR-30a MIMAT0000087 Homo sapiens miR-30a Targets (miRBase)

Match Rank:4
Score:0.72
Offset:-14
Orientation:forward strand
Alignment:--------------TGTTT---
CTTCCAGTCGAGGATGTTTACA

hsa-miR-30d MIMAT0000245 Homo sapiens miR-30d Targets (miRBase)

Match Rank:5
Score:0.72
Offset:-14
Orientation:forward strand
Alignment:--------------TGTTT---
CTTCCAGTCGGGGATGTTTACA

hsa-miR-494 MIMAT0002816 Homo sapiens miR-494 Targets (miRBase)

Match Rank:6
Score:0.72
Offset:-15
Orientation:forward strand
Alignment:---------------TGTTT--
GAGGTTTCCCGTGTATGTTTCA

hsa-miR-30e MIMAT0000692 Homo sapiens miR-30e Targets (miRBase)

Match Rank:7
Score:0.72
Offset:-14
Orientation:forward strand
Alignment:--------------TGTTT---
CTTCCAGTCAAGGATGTTTACA

hsa-miR-570 MIMAT0003235 Homo sapiens miR-570 Targets (miRBase)

Match Rank:8
Score:0.72
Offset:-14
Orientation:forward strand
Alignment:--------------TGTTT---
GCAAAGGTAATTGCTGTTTTCG

hsa-miR-30b MIMAT0000420 Homo sapiens miR-30b Targets (miRBase)

Match Rank:9
Score:0.72
Offset:-14
Orientation:forward strand
Alignment:--------------TGTTT---
AGCTGAGTGTAGGATGTTTACA

hsa-miR-452 MIMAT0001635 Homo sapiens miR-452 Targets (miRBase)

Match Rank:10
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TGTTT--------------
AACTGTTTGCAGAGGAAACTGA