Information for 6-TTTGGA (Motif 17)


Reverse Opposite:

p-value:1e-262
log p-value:-6.037e+02
Information Content per bp:1.896
Number of Target Sequences with motif33559.0
Percentage of Target Sequences with motif41.59%
Number of Background Sequences with motif254796.0
Percentage of Background Sequences with motif35.37%
Average Position of motif in Targets155.6 +/- 163.3bp
Average Position of motif in Background133.1 +/- 151.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3145-5p MIMAT0019205 Homo sapiens miR-3145-5p Targets (miRBase)

Match Rank:1
Score:0.70
Offset:-13
Orientation:forward strand
Alignment:-------------TTTGGA---
TGAGTTTTGAGTGTTTGGAGTT

hsa-miR-519e* MIMAT0002828 Homo sapiens miR-519e* Targets (miRBase)

Match Rank:2
Score:0.70
Offset:-13
Orientation:forward strand
Alignment:-------------TTTGGA---
GAAAGTGCTCCCTTTTGGAGAA

hsa-miR-4520b-3p MIMAT0020300 Homo sapiens miR-4520b-3p Targets (miRBase)

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTGGA----------------
TTTGGACAGAAAACACGCAGGT

hsa-miR-515-5p MIMAT0002826 Homo sapiens miR-515-5p Targets (miRBase)

Match Rank:4
Score:0.69
Offset:-15
Orientation:forward strand
Alignment:---------------TTTGGA---
CAGAAAGTGCTTTCTTTTGGAGAA

hsa-miR-4752 MIMAT0019889 Homo sapiens miR-4752 Targets (miRBase)

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGA---------------
TTGTGGATCTCAAGGATGTGCT

hsa-miR-4491 MIMAT0019026 Homo sapiens miR-4491 Targets (miRBase)

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGA--------------
AATGTGGACTGGTGTGACCAAA

hsa-miR-3911 MIMAT0018185 Homo sapiens miR-3911 Targets (miRBase)

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGA--------------
TGTGTGGATCCTGGAGGAGGCA

hsa-miR-4657 MIMAT0019724 Homo sapiens miR-4657 Targets (miRBase)

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGA---------------
AATGTGGAAGTGGTCTGAGGCAT

hsa-miR-3692 MIMAT0018122 Homo sapiens miR-3692 Targets (miRBase)

Match Rank:9
Score:0.68
Offset:-16
Orientation:forward strand
Alignment:----------------TTTGGA--
ACTTCTGCAGTGTCAGTGTGGAAC

hsa-miR-587 MIMAT0003253 Homo sapiens miR-587 Targets (miRBase)

Match Rank:10
Score:0.67
Offset:-13
Orientation:forward strand
Alignment:-------------TTTGGA--
GTGACTCATCACCTATGGAAA