Information for 6-AATAATGG (Motif 20)


Reverse Opposite:

p-value:1e-225
log p-value:-5.184e+02
Information Content per bp:1.733
Number of Target Sequences with motif56487.0
Percentage of Target Sequences with motif70.01%
Number of Background Sequences with motif463878.2
Percentage of Background Sequences with motif64.39%
Average Position of motif in Targets160.0 +/- 159.9bp
Average Position of motif in Background132.8 +/- 154.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.72
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-2681 MIMAT0013516 Homo sapiens miR-2681 Targets (miRBase)

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AATAATGG--------------
TATCATGGAGTTGGTAAAGCAC

hsa-miR-126* MIMAT0000444 Homo sapiens miR-126* Targets (miRBase)

Match Rank:2
Score:0.67
Offset:-14
Orientation:forward strand
Alignment:--------------AATAATGG
CGCGTACCAAAAGTAATAATG-

hsa-miR-122* MIMAT0004590 Homo sapiens miR-122* Targets (miRBase)

Match Rank:3
Score:0.65
Offset:-10
Orientation:forward strand
Alignment:----------AATAATGG----
TATTTAGTGTGATAATGGCGTT

hsa-miR-4716-5p MIMAT0019826 Homo sapiens miR-4716-5p Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-13
Orientation:forward strand
Alignment:-------------AATAATGG-
AGAAGGGGGAAGGAAACATGGA

hsa-miR-885-5p MIMAT0004947 Homo sapiens miR-885-5p Targets (miRBase)

Match Rank:5
Score:0.64
Offset:-13
Orientation:forward strand
Alignment:-------------AATAATGG-
AGAGGCAGGGTAGTGTAATGGA

hsa-miR-522 MIMAT0002868 Homo sapiens miR-522 Targets (miRBase)

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AATAATGG---------------
-AAAATGGTTCCCTTTAGAGTGT

hsa-miR-224* MIMAT0009198 Homo sapiens miR-224* Targets (miRBase)

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AATAATGG----------------
-AAAATGGTGCCCTAGTGACTACA

hsa-miR-4426 MIMAT0018941 Homo sapiens miR-4426 Targets (miRBase)

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AATAATGG---------
GAAGATGGACGTACTTT

hsa-miR-195* MIMAT0004615 Homo sapiens miR-195* Targets (miRBase)

Match Rank:9
Score:0.61
Offset:-14
Orientation:forward strand
Alignment:--------------AATAATGG
GGAGCAGCACAGCCAATATTGG

hsa-miR-16-2* MIMAT0004518 Homo sapiens miR-16-2* Targets (miRBase)

Match Rank:10
Score:0.61
Offset:-14
Orientation:forward strand
Alignment:--------------AATAATGG
TAAAGCAGCACAGTAATATTGG