Information for 6-TAGCGA (Motif 10)


Reverse Opposite:

p-value:1e-428
log p-value:-9.865e+02
Information Content per bp:1.872
Number of Target Sequences with motif63320.0
Percentage of Target Sequences with motif73.26%
Number of Background Sequences with motif494985.1
Percentage of Background Sequences with motif65.88%
Average Position of motif in Targets156.3 +/- 159.0bp
Average Position of motif in Background135.9 +/- 149.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.83
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-720 MIMAT0005954 Homo sapiens miR-720 Targets (miRBase)

Match Rank:1
Score:0.67
Offset:-9
Orientation:forward strand
Alignment:---------TAGCGA--
TGGAGGCCCCAGCGAGA

hsa-miR-4670-5p MIMAT0019750 Homo sapiens miR-4670-5p Targets (miRBase)

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TAGCGA----------------
AAGCGACCATGATGTAACTTCA

hsa-miR-4321 MIMAT0016874 Homo sapiens miR-4321 Targets (miRBase)

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAGCGA--------------
TTAGCGGTGGACCGCCCTGCG

hsa-miR-4794 MIMAT0019967 Homo sapiens miR-4794 Targets (miRBase)

Match Rank:4
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------TAGCGA--
ACAGTCTCGTGAGATAGCCAGA

hsa-miR-4662a-5p MIMAT0019731 Homo sapiens miR-4662a-5p Targets (miRBase)

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAGCGA---------------
TTAGCCAATTGTCCATCTTTAG

hsa-miR-639 MIMAT0003309 Homo sapiens miR-639 Targets (miRBase)

Match Rank:6
Score:0.63
Offset:-16
Orientation:forward strand
Alignment:----------------TAGCGA-
ACAGCGCTCGCAACCGCAGCGAT

hsa-miR-4790-5p MIMAT0019961 Homo sapiens miR-4790-5p Targets (miRBase)

Match Rank:7
Score:0.63
Offset:-13
Orientation:forward strand
Alignment:-------------TAGCGA-
AACATGAATGGTAAAGCGAT

hsa-miR-664* MIMAT0005948 Homo sapiens miR-664* Targets (miRBase)

Match Rank:8
Score:0.63
Offset:-16
Orientation:forward strand
Alignment:----------------TAGCGA--
ATCCAATCATTTTCCCTAGCCAGT

hsa-miR-4766-3p MIMAT0019918 Homo sapiens miR-4766-3p Targets (miRBase)

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAGCGA--------------
ATAGCAATTGCTCTTTTGGAA

hsa-miR-4798-5p MIMAT0019974 Homo sapiens miR-4798-5p Targets (miRBase)

Match Rank:10
Score:0.62
Offset:-15
Orientation:forward strand
Alignment:---------------TAGCGA-
CCAATTCACAAAGTATACCGAA