Information for 6-CAAAMAAAM (Motif 8)


Reverse Opposite:

p-value:1e-294
log p-value:-6.788e+02
Information Content per bp:1.645
Number of Target Sequences with motif18364.0
Percentage of Target Sequences with motif6.41%
Number of Background Sequences with motif123359.6
Percentage of Background Sequences with motif4.78%
Average Position of motif in Targets19.6 +/- 8.5bp
Average Position of motif in Background20.5 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-495 MIMAT0002817 Homo sapiens miR-495 Targets (miRBase)

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CAAAMAAAM--------------
-AAACAAACATGGTGCACTTCTT

hsa-miR-3613-3p MIMAT0017991 Homo sapiens miR-3613-3p Targets (miRBase)

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CAAAMAAAM--------------
ACAAAAAAAAAAGCCCAACCCTTC

hsa-miR-3065-5p MIMAT0015066 Homo sapiens miR-3065-5p Targets (miRBase)

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAAAMAAAM--------------
TCAACAAAATCACTGATGCTGGA

hsa-miR-7-2* MIMAT0004554 Homo sapiens miR-7-2* Targets (miRBase)

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAAAMAAAM--------------
-CAACAAATCCCAGTCTACCTAA

hsa-miR-7-1* MIMAT0004553 Homo sapiens miR-7-1* Targets (miRBase)

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAAAMAAAM--------------
-CAACAAATCACAGTCTGCCATA

hsa-miR-548x MIMAT0015081 Homo sapiens miR-548x Targets (miRBase)

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAAAMAAAM-------------
--TAAAAACTGCAATTACTTTC

hsa-miR-375 MIMAT0000728 Homo sapiens miR-375 Targets (miRBase)

Match Rank:7
Score:0.59
Offset:-14
Orientation:forward strand
Alignment:--------------CAAAMAAAM
TCACGCGAGCCGAACGAACAAA-

hsa-miR-548aj MIMAT0018990 Homo sapiens miR-548aj Targets (miRBase)

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAAAMAAAM--------------
--TAAAAACTGCAATTACTTTTA

hsa-miR-3149 MIMAT0015022 Homo sapiens miR-3149 Targets (miRBase)

Match Rank:9
Score:0.58
Offset:-15
Orientation:forward strand
Alignment:---------------CAAAMAAAM
ATACACACACATATCCATACAAA-

hsa-miR-548ae MIMAT0018954 Homo sapiens miR-548ae Targets (miRBase)

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAAAMAAAM--------------
--CAAAAACTGCAATTACTTTCA