Information for 9-GAAAAACAG (Motif 25)


Reverse Opposite:

p-value:1e-214
log p-value:-4.936e+02
Information Content per bp:1.530
Number of Target Sequences with motif77798.0
Percentage of Target Sequences with motif90.02%
Number of Background Sequences with motif648600.9
Percentage of Background Sequences with motif86.33%
Average Position of motif in Targets159.3 +/- 152.1bp
Average Position of motif in Background132.8 +/- 159.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-548f MIMAT0005895 Homo sapiens miR-548f Targets (miRBase)

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GAAAAACAG-----------
-AAAAACTGTAATTACTTTT

hsa-miR-4328 MIMAT0016926 Homo sapiens miR-4328 Targets (miRBase)

Match Rank:2
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------GAAAAACAG-
AATCCTGGGAAAACTGG

hsa-miR-4676-3p MIMAT0019759 Homo sapiens miR-4676-3p Targets (miRBase)

Match Rank:3
Score:0.67
Offset:-11
Orientation:forward strand
Alignment:-----------GAAAAACAG--
AAGAGCCAGTGGTGAAACAGTG

hsa-miR-4307 MIMAT0016860 Homo sapiens miR-4307 Targets (miRBase)

Match Rank:4
Score:0.66
Offset:-9
Orientation:forward strand
Alignment:---------GAAAAACAG-
GGAAACAGGAAAAAACATT

hsa-miR-548e MIMAT0005874 Homo sapiens miR-548e Targets (miRBase)

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GAAAAACAG--------------
-AAAAACTGAGACTACTTTTGCA

hsa-miR-548x MIMAT0015081 Homo sapiens miR-548x Targets (miRBase)

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GAAAAACAG-----------
TAAAAACTGCAATTACTTTC

hsa-miR-548aj MIMAT0018990 Homo sapiens miR-548aj Targets (miRBase)

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAAAAACAG------------
TAAAAACTGCAATTACTTTTA

hsa-miR-548ae MIMAT0018954 Homo sapiens miR-548ae Targets (miRBase)

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAAAAACAG------------
CAAAAACTGCAATTACTTTCA

hsa-miR-26b* MIMAT0004500 Homo sapiens miR-26b* Targets (miRBase)

Match Rank:9
Score:0.64
Offset:-12
Orientation:forward strand
Alignment:------------GAAAAACAG-
GAGCCAAGTAATGGAGAACAGG

hsa-miR-570 MIMAT0003235 Homo sapiens miR-570 Targets (miRBase)

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAAAAACAG-------------
CGAAAACAGCAATTACCTTTGC