Information for 3-NTGGTGTGG (Motif 6)


Reverse Opposite:

p-value:1e-433
log p-value:-9.980e+02
Information Content per bp:1.696
Number of Target Sequences with motif16472.0
Percentage of Target Sequences with motif20.41%
Number of Background Sequences with motif102911.4
Percentage of Background Sequences with motif14.28%
Average Position of motif in Targets154.0 +/- 168.0bp
Average Position of motif in Background135.5 +/- 150.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-497* MIMAT0004768 Homo sapiens miR-497* Targets (miRBase)

Match Rank:1
Score:0.65
Offset:-14
Orientation:forward strand
Alignment:--------------NTGGTGTGG
TCTAACACCACAGTGTGGTTTG-

hsa-miR-21* MIMAT0004494 Homo sapiens miR-21* Targets (miRBase)

Match Rank:2
Score:0.65
Offset:-12
Orientation:forward strand
Alignment:------------NTGGTGTGG
ACAGCCCATCGACTGGTGTTG

hsa-miR-3650 MIMAT0018070 Homo sapiens miR-3650 Targets (miRBase)

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:NTGGTGTGG-----------
-AGGTGTGTCTGTAGAGTCC

hsa-miR-4258 MIMAT0016879 Homo sapiens miR-4258 Targets (miRBase)

Match Rank:4
Score:0.64
Offset:-8
Orientation:forward strand
Alignment:--------NTGGTGTGG
CCAAGGCGGTGGCGGGG

hsa-miR-362-3p MIMAT0004683 Homo sapiens miR-362-3p Targets (miRBase)

Match Rank:5
Score:0.64
Offset:-12
Orientation:forward strand
Alignment:------------NTGGTGTGG-
TGAATCCTTGAATAGGTGTGTT

hsa-miR-675 MIMAT0004284 Homo sapiens miR-675 Targets (miRBase)

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:NTGGTGTGG---------------
-TGGTGCGGAGAGGGCCCACAGTG

hsa-miR-3120-3p MIMAT0014982 Homo sapiens miR-3120-3p Targets (miRBase)

Match Rank:7
Score:0.63
Offset:-13
Orientation:forward strand
Alignment:-------------NTGGTGTGG
TGCCTGTCTACACTTGCTGTG-

hsa-miR-329 MIMAT0001629 Homo sapiens miR-329 Targets (miRBase)

Match Rank:8
Score:0.62
Offset:-12
Orientation:forward strand
Alignment:------------NTGGTGTGG-
AAAGAGGTTAACCAGGTGTGTT

hsa-miR-3591-3p MIMAT0019877 Homo sapiens miR-3591-3p Targets (miRBase)

Match Rank:9
Score:0.62
Offset:-13
Orientation:forward strand
Alignment:-------------NTGGTGTGG
GTGGAGTGTGACAATGGTGTTT

hsa-miR-4455 MIMAT0018977 Homo sapiens miR-4455 Targets (miRBase)

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:NTGGTGTGG--------
AGGGTGTGTGTGTTTTT