Information for 7-TGGAATGGAA (Motif 23)


Reverse Opposite:

p-value:1e-229
log p-value:-5.278e+02
Information Content per bp:1.669
Number of Target Sequences with motif38455.0
Percentage of Target Sequences with motif44.49%
Number of Background Sequences with motif291370.5
Percentage of Background Sequences with motif38.78%
Average Position of motif in Targets156.7 +/- 156.3bp
Average Position of motif in Background135.8 +/- 154.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3673 MIMAT0018096 Homo sapiens miR-3673 Targets (miRBase)

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGGAATGGAA----------
ATGGAATGTATATACGGAATA

hsa-miR-206 MIMAT0000462 Homo sapiens miR-206 Targets (miRBase)

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGGAATGGAA------------
TGGAATGTAAGGAAGTGTGTGG

hsa-miR-1 MIMAT0000416 Homo sapiens miR-1 Targets (miRBase)

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGGAATGGAA------------
TGGAATGTAAAGAAGTATGTAT

hsa-miR-106a* MIMAT0004517 Homo sapiens miR-106a* Targets (miRBase)

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGGAATGGAA-----------
CTGCAATGTAAGCACTTCTTAC

hsa-miR-885-5p MIMAT0004947 Homo sapiens miR-885-5p Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-13
Orientation:forward strand
Alignment:-------------TGGAATGGAA
AGAGGCAGGGTAGTGTAATGGA-

hsa-miR-455-3p MIMAT0004784 Homo sapiens miR-455-3p Targets (miRBase)

Match Rank:6
Score:0.61
Offset:-13
Orientation:forward strand
Alignment:-------------TGGAATGGAA
GTGTATATGCCCATGGACTGC--

hsa-miR-607 MIMAT0003275 Homo sapiens miR-607 Targets (miRBase)

Match Rank:7
Score:0.60
Offset:-10
Orientation:forward strand
Alignment:----------TGGAATGGAA-
GTTATAGATCTGGATTTGAAC

hsa-miR-378e MIMAT0018927 Homo sapiens miR-378e Targets (miRBase)

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGAATGGAA-------
ACTGGACTTGGAGTCAGGA

hsa-miR-378b MIMAT0014999 Homo sapiens miR-378b Targets (miRBase)

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGAATGGAA-------
ACTGGACTTGGAGGCAGAA

hsa-miR-378f MIMAT0018932 Homo sapiens miR-378f Targets (miRBase)

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGAATGGAA--------
ACTGGACTTGGAGCCAGAAG