Information for 13-TTTGATT (Motif 19)


Reverse Opposite:

p-value:1e-16
log p-value:-3.870e+01
Information Content per bp:1.791
Number of Target Sequences with motif611.0
Percentage of Target Sequences with motif6.36%
Number of Background Sequences with motif3475.1
Percentage of Background Sequences with motif4.36%
Average Position of motif in Targets25.4 +/- 18.2bp
Average Position of motif in Background29.2 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-495 MIMAT0002817 Homo sapiens miR-495 Targets (miRBase)

Match Rank:1
Score:0.70
Offset:-15
Orientation:forward strand
Alignment:---------------TTTGATT
AAGAAGTGCACCATGTTTGTTT

hsa-miR-551b* MIMAT0004794 Homo sapiens miR-551b* Targets (miRBase)

Match Rank:2
Score:0.68
Offset:-13
Orientation:forward strand
Alignment:-------------TTTGATT--
GGTCTCACCCACGCTTGATTTC

hsa-miR-888 MIMAT0004916 Homo sapiens miR-888 Targets (miRBase)

Match Rank:3
Score:0.66
Offset:-13
Orientation:forward strand
Alignment:-------------TTTGATT-
TGACTGACAGCTTTTTGAGTA

hsa-miR-4760-5p MIMAT0019906 Homo sapiens miR-4760-5p Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTTGATT--------------
TTTAGATTGAACATGAAGTTAG

hsa-miR-9 MIMAT0000441 Homo sapiens miR-9 Targets (miRBase)

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTGATT--------------
TCTTTGGTTATCTAGCTGTATGA

hsa-miR-3671 MIMAT0018094 Homo sapiens miR-3671 Targets (miRBase)

Match Rank:6
Score:0.64
Offset:-16
Orientation:forward strand
Alignment:----------------TTTGATT
TGCAGACTAGTCCTTATTTGAT-

hsa-miR-7-1* MIMAT0004553 Homo sapiens miR-7-1* Targets (miRBase)

Match Rank:7
Score:0.64
Offset:-15
Orientation:forward strand
Alignment:---------------TTTGATT
TATGGCAGACTGTGATTTGTTG

hsa-miR-7-2* MIMAT0004554 Homo sapiens miR-7-2* Targets (miRBase)

Match Rank:8
Score:0.64
Offset:-15
Orientation:forward strand
Alignment:---------------TTTGATT
TTAGGTAGACTGGGATTTGTTG

hsa-miR-2052 MIMAT0009977 Homo sapiens miR-2052 Targets (miRBase)

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTGATT----------
TGTTTTGATAACAGTAATGT

hsa-miR-335* MIMAT0004703 Homo sapiens miR-335* Targets (miRBase)

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTGATT-------------
TTTTTCATTATTGCTCCTGACC