Information for 8-ATCGGTGAG (Motif 14)


Reverse Opposite:

p-value:1e-23
log p-value:-5.314e+01
Information Content per bp:1.509
Number of Target Sequences with motif234.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif879.4
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets30.1 +/- 20.0bp
Average Position of motif in Background28.4 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4792 MIMAT0019964 Homo sapiens miR-4792 Targets (miRBase)

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATCGGTGAG-----------
--CGGTGAGCGCTCGCTGGC

hsa-miR-29c* MIMAT0004673 Homo sapiens miR-29c* Targets (miRBase)

Match Rank:2
Score:0.67
Offset:-14
Orientation:forward strand
Alignment:--------------ATCGGTGAG
GAACACCAGGAGAAATCGGTCA-

hsa-miR-1280 MIMAT0005946 Homo sapiens miR-1280 Targets (miRBase)

Match Rank:3
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------ATCGGTGAG-
GGGTGGCAGCGGTGGGA

hsa-miR-4285 MIMAT0016913 Homo sapiens miR-4285 Targets (miRBase)

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATCGGTGAG----------
-GCGGCGAGTCCGACTCAT

hsa-miR-1229 MIMAT0005584 Homo sapiens miR-1229 Targets (miRBase)

Match Rank:5
Score:0.62
Offset:-12
Orientation:forward strand
Alignment:------------ATCGGTGAG--
CTGTGGGAGGGCAGTGGTGAGAG

hsa-miR-3610 MIMAT0017987 Homo sapiens miR-3610 Targets (miRBase)

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATCGGTGAG---------
GAATCGGAAAGGAGGCGCCG

hsa-miR-4701-3p MIMAT0019799 Homo sapiens miR-4701-3p Targets (miRBase)

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATCGGTGAG-----------
ATGGGTGATGGGTGTGGTGT

hsa-miR-553 MIMAT0003216 Homo sapiens miR-553 Targets (miRBase)

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATCGGTGAG----------
AAAACGGTGAGATTTTGTTTT

hsa-miR-4710 MIMAT0019815 Homo sapiens miR-4710 Targets (miRBase)

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATCGGTGAG-----------
--GGGTGAGGGCAGGTGGTT

hsa-miR-4420 MIMAT0018933 Homo sapiens miR-4420 Targets (miRBase)

Match Rank:10
Score:0.60
Offset:-13
Orientation:forward strand
Alignment:-------------ATCGGTGAG
CTCAGCTACAGACATCAGTGAC