Information for 11-ATCGMMGA (Motif 7)


Reverse Opposite:

p-value:1e-23
log p-value:-5.404e+01
Information Content per bp:1.401
Number of Target Sequences with motif287.0
Percentage of Target Sequences with motif3.35%
Number of Background Sequences with motif1190.9
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets31.2 +/- 15.2bp
Average Position of motif in Background28.6 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-450a MIMAT0001545 Homo sapiens miR-450a Targets (miRBase)

Match Rank:1
Score:0.59
Offset:-13
Orientation:forward strand
Alignment:-------------ATCGMMGA-
ATATTAGGAACACATCGCAAAA

hsa-miR-151b MIMAT0010214 Homo sapiens miR-151b Targets (miRBase)

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATCGMMGA-----------
-TCGAGGAGCTCACAGTCT

hsa-miR-369-5p MIMAT0001621 Homo sapiens miR-369-5p Targets (miRBase)

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATCGMMGA------------
AGATCGACCGTGTTATATTCGC

hsa-miR-181a* MIMAT0000270 Homo sapiens miR-181a* Targets (miRBase)

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATCGMMGA-----------
ACCATCGACCGTTGATTGTACC

hsa-miR-3610 MIMAT0017987 Homo sapiens miR-3610 Targets (miRBase)

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATCGMMGA----------
GAATCGGAAAGGAGGCGCCG

hsa-miR-4769-3p MIMAT0019923 Homo sapiens miR-4769-3p Targets (miRBase)

Match Rank:6
Score:0.58
Offset:-14
Orientation:forward strand
Alignment:--------------ATCGMMGA
GTAGGGGAGGGAGGATGGCAGA

hsa-miR-151-5p MIMAT0004697 Homo sapiens miR-151-5p Targets (miRBase)

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATCGMMGA--------------
-TCGAGGAGCTCACAGTCTAGT

hsa-miR-638 MIMAT0003308 Homo sapiens miR-638 Targets (miRBase)

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATCGMMGA-------------
AGGGATCGCGGGCGGGTGGCGGCCT

hsa-miR-3131 MIMAT0014996 Homo sapiens miR-3131 Targets (miRBase)

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATCGMMGA----------------
-TCGAGGACTGGTGGAAGGGCCTT

hsa-miR-4671-5p MIMAT0019752 Homo sapiens miR-4671-5p Targets (miRBase)

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATCGMMGA--------------
ACCGAAGACTGTGCGCTAATCT