Information for 9-AGRCCGACG (Motif 15)


Reverse Opposite:

p-value:1e-22
log p-value:-5.232e+01
Information Content per bp:1.656
Number of Target Sequences with motif401.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif1876.1
Percentage of Background Sequences with motif2.35%
Average Position of motif in Targets33.4 +/- 30.2bp
Average Position of motif in Background26.5 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4513 MIMAT0019050 Homo sapiens miR-4513 Targets (miRBase)

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGRCCGACG-------------
AGACTGACGGCTGGAGGCCCAT

hsa-miR-4419b MIMAT0019034 Homo sapiens miR-4419b Targets (miRBase)

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGRCCGACG--------
GAGGCTGAAGGAAGATGG

hsa-miR-3929 MIMAT0018206 Homo sapiens miR-3929 Targets (miRBase)

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGRCCGACG-------------
GAGGCTGATGTGAGTAGACCACT

hsa-miR-346 MIMAT0000773 Homo sapiens miR-346 Targets (miRBase)

Match Rank:4
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------AGRCCGACG
AGAGGCAGGCATGCGGGCAGACA

hsa-miR-4800-3p MIMAT0019979 Homo sapiens miR-4800-3p Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AGRCCGACG----
GTGGACAGACGGACGGATG

hsa-miR-1234 MIMAT0005589 Homo sapiens miR-1234 Targets (miRBase)

Match Rank:6
Score:0.62
Offset:-15
Orientation:forward strand
Alignment:---------------AGRCCGACG
GTGGGGTGGGTGGTCAGGCCGA--

hsa-miR-29c* MIMAT0004673 Homo sapiens miR-29c* Targets (miRBase)

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGRCCGACG-------------
TGACCGATTTCTCCTGGTGTTC

hsa-miR-3186-5p MIMAT0015067 Homo sapiens miR-3186-5p Targets (miRBase)

Match Rank:8
Score:0.61
Offset:-9
Orientation:forward strand
Alignment:---------AGRCCGACG----
AAGCCACGTAGACAGACGCCTG

hsa-miR-3944-3p MIMAT0018360 Homo sapiens miR-3944-3p Targets (miRBase)

Match Rank:9
Score:0.60
Offset:-15
Orientation:forward strand
Alignment:---------------AGRCCGACG
CCGGAGCAGCAGGCCAGCCCGAA-

hsa-miR-4499 MIMAT0019035 Homo sapiens miR-4499 Targets (miRBase)

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGRCCGACG-------
AAGACTGAGAGGAGGGA