Information for 14-TYKHKTT (Motif 18)


Reverse Opposite:

p-value:1e-9
log p-value:-2.300e+01
Information Content per bp:1.477
Number of Target Sequences with motif372.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif2169.8
Percentage of Background Sequences with motif3.01%
Average Position of motif in Targets24.6 +/- 16.7bp
Average Position of motif in Background28.0 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4444 MIMAT0018962 Homo sapiens miR-4444 Targets (miRBase)

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TYKHKTT----------
CTCGAGTTGGAAGAGGCG

hsa-miR-4790-5p MIMAT0019961 Homo sapiens miR-4790-5p Targets (miRBase)

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TYKHKTT------------
ATCGCTTTACCATTCATGTT

hsa-miR-548ad MIMAT0018946 Homo sapiens miR-548ad Targets (miRBase)

Match Rank:3
Score:0.61
Offset:-14
Orientation:forward strand
Alignment:--------------TYKHKTT-
TGCAAAAGTCATTGTCGTTTTC

hsa-miR-551b* MIMAT0004794 Homo sapiens miR-551b* Targets (miRBase)

Match Rank:4
Score:0.59
Offset:-14
Orientation:forward strand
Alignment:--------------TYKHKTT-
GGTCTCACCCACGCTTGATTTC

hsa-miR-4311 MIMAT0016863 Homo sapiens miR-4311 Targets (miRBase)

Match Rank:5
Score:0.58
Offset:-10
Orientation:forward strand
Alignment:----------TYKHKTT-
CACACTCAGCTCTCTTTC

hsa-miR-581 MIMAT0003246 Homo sapiens miR-581 Targets (miRBase)

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TYKHKTT------------
TCTTGTGTTCTCTAGATCAGT

hsa-miR-21* MIMAT0004494 Homo sapiens miR-21* Targets (miRBase)

Match Rank:7
Score:0.56
Offset:-13
Orientation:forward strand
Alignment:-------------TYKHKTT-
ACAGCCCATCGACTGGTGTTG

hsa-miR-4753-3p MIMAT0019891 Homo sapiens miR-4753-3p Targets (miRBase)

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TYKHKTT--------------
TTCTCTTTCTTTAGCCTTGTGT

hsa-miR-3591-3p MIMAT0019877 Homo sapiens miR-3591-3p Targets (miRBase)

Match Rank:9
Score:0.56
Offset:-14
Orientation:forward strand
Alignment:--------------TYKHKTT-
GTGGAGTGTGACAATGGTGTTT

hsa-miR-708* MIMAT0004927 Homo sapiens miR-708* Targets (miRBase)

Match Rank:10
Score:0.56
Offset:-14
Orientation:forward strand
Alignment:--------------TYKHKTT-
CTAGAAGCTCACAGTCTAGTTG