Information for 8-CACACACAC (Motif 20)


Reverse Opposite:

p-value:1e-269
log p-value:-6.205e+02
Information Content per bp:1.639
Number of Target Sequences with motif2544.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif9485.2
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets147.2 +/- 135.7bp
Average Position of motif in Background120.9 +/- 162.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.87
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4455 MIMAT0018977 Homo sapiens miR-4455 Targets (miRBase)

Match Rank:1
Score:0.79
Offset:-7
Orientation:forward strand
Alignment:-------CACACACAC-
AAAAACACACACACCCT

hsa-miR-574-5p MIMAT0004795 Homo sapiens miR-574-5p Targets (miRBase)

Match Rank:2
Score:0.74
Offset:-13
Orientation:forward strand
Alignment:-------------CACACACAC-
ACACACTCACACACACACACTCA

hsa-miR-3650 MIMAT0018070 Homo sapiens miR-3650 Targets (miRBase)

Match Rank:3
Score:0.74
Offset:-8
Orientation:forward strand
Alignment:--------CACACACAC--
GGACTCTACAGACACACCT

hsa-miR-147 MIMAT0000251 Homo sapiens miR-147 Targets (miRBase)

Match Rank:4
Score:0.71
Offset:-13
Orientation:forward strand
Alignment:-------------CACACACAC
GCAGAAGCATTTCCACACAC--

hsa-miR-603 MIMAT0003271 Homo sapiens miR-603 Targets (miRBase)

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CACACACAC---------------
--CACACACTGCAATTACTTTTGC

hsa-miR-4658 MIMAT0019725 Homo sapiens miR-4658 Targets (miRBase)

Match Rank:6
Score:0.69
Offset:-14
Orientation:forward strand
Alignment:--------------CACACACAC
ATTCCTCCAGGATCCACACTCAC

hsa-miR-342-3p MIMAT0000753 Homo sapiens miR-342-3p Targets (miRBase)

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CACACACAC-------------
TCTCACACAGAAATCGCACCCGT

hsa-miR-3941 MIMAT0018357 Homo sapiens miR-3941 Targets (miRBase)

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CACACACAC------------
TTACACACAACTGAGGATCATA

hsa-miR-377 MIMAT0000730 Homo sapiens miR-377 Targets (miRBase)

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACACACAC-----------
ATCACACAAAGGCAACTTTTGT

hsa-miR-329 MIMAT0001629 Homo sapiens miR-329 Targets (miRBase)

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CACACACAC---------------
--AACACACCTGGTTAACCTCTTT