Information for 8-GATATC (Motif 21)


Reverse Opposite:

p-value:1e-220
log p-value:-5.083e+02
Information Content per bp:1.968
Number of Target Sequences with motif54553.0
Percentage of Target Sequences with motif67.61%
Number of Background Sequences with motif446349.7
Percentage of Background Sequences with motif61.96%
Average Position of motif in Targets152.9 +/- 167.1bp
Average Position of motif in Background131.0 +/- 146.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-144* MIMAT0004600 Homo sapiens miR-144* Targets (miRBase)

Match Rank:1
Score:0.80
Offset:-15
Orientation:forward strand
Alignment:---------------GATATC-
CTTACAGTATATGATGATATCC

hsa-miR-3074-3p MIMAT0015027 Homo sapiens miR-3074-3p Targets (miRBase)

Match Rank:2
Score:0.72
Offset:-16
Orientation:forward strand
Alignment:----------------GATATC
CGGTGCCTACTGAGCTGATATC

hsa-miR-3689f MIMAT0019010 Homo sapiens miR-3689f Targets (miRBase)

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GATATC-------------
TGTGATATCGTGCTTCCTGGGA

hsa-miR-3689a-5p MIMAT0018117 Homo sapiens miR-3689a-5p Targets (miRBase)

Match Rank:4
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GATATC-------------
TGTGATATCATGGTTCCTGGGA

hsa-miR-3689b MIMAT0018180 Homo sapiens miR-3689b Targets (miRBase)

Match Rank:5
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GATATC-------------
TGTGATATCATGGTTCCTGGGA

hsa-miR-3689e MIMAT0019009 Homo sapiens miR-3689e Targets (miRBase)

Match Rank:6
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GATATC-------------
TGTGATATCATGGTTCCTGGGA

hsa-miR-3201 MIMAT0015086 Homo sapiens miR-3201 Targets (miRBase)

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GATATC---------
GGGATATGAAGAAAAAT

hsa-miR-4791 MIMAT0019963 Homo sapiens miR-4791 Targets (miRBase)

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GATATC----------
TGGATATGATGACTGAAA

hsa-miR-190b MIMAT0004929 Homo sapiens miR-190b Targets (miRBase)

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GATATC--------------
TGATATGTTTGATATTGGGTT

hsa-miR-889 MIMAT0004921 Homo sapiens miR-889 Targets (miRBase)

Match Rank:10
Score:0.63
Offset:-13
Orientation:forward strand
Alignment:-------------GATATC--
ACAATGGTTGTCCGATATTAA