Information for 9-TGGGTA (Motif 14)


Reverse Opposite:

p-value:1e-347
log p-value:-7.996e+02
Information Content per bp:1.962
Number of Target Sequences with motif39778.0
Percentage of Target Sequences with motif46.03%
Number of Background Sequences with motif292778.7
Percentage of Background Sequences with motif38.97%
Average Position of motif in Targets167.3 +/- 162.4bp
Average Position of motif in Background134.6 +/- 156.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-1225-5p MIMAT0005572 Homo sapiens miR-1225-5p Targets (miRBase)

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTA---------------
GTGGGTACGGCCCAGTGGGGGG

hsa-miR-3130-5p MIMAT0014995 Homo sapiens miR-3130-5p Targets (miRBase)

Match Rank:2
Score:0.72
Offset:-15
Orientation:forward strand
Alignment:---------------TGGGTA
GGCTGCACCGGAGACTGGGTA

hsa-miR-660 MIMAT0003338 Homo sapiens miR-660 Targets (miRBase)

Match Rank:3
Score:0.72
Offset:-16
Orientation:forward strand
Alignment:----------------TGGGTA
CAACTCCGATATGCAATGGGTA

hsa-miR-1912 MIMAT0007887 Homo sapiens miR-1912 Targets (miRBase)

Match Rank:4
Score:0.72
Offset:-16
Orientation:forward strand
Alignment:----------------TGGGTA
TTCACACTGCATGCTCTGGGTA

hsa-miR-3132 MIMAT0014997 Homo sapiens miR-3132 Targets (miRBase)

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGGGTA------------------
TGGGTAGAGAAGGAGCTCAGAGGA

hsa-miR-3115 MIMAT0014977 Homo sapiens miR-3115 Targets (miRBase)

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTA-----------
ATATGGGTTTACTAGTTGGT

hsa-miR-4506 MIMAT0019042 Homo sapiens miR-4506 Targets (miRBase)

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTA-----------
AAATGGGTGGTCTGAGGCAA

hsa-miR-555 MIMAT0003219 Homo sapiens miR-555 Targets (miRBase)

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGGGTA---------------
AGGGTAAGCTGAACCTCTGAT

hsa-miR-4482 MIMAT0019016 Homo sapiens miR-4482 Targets (miRBase)

Match Rank:9
Score:0.64
Offset:-16
Orientation:forward strand
Alignment:----------------TGGGTA
CATTTCCATAGCCCACTGGGTT

hsa-miR-4646-5p MIMAT0019707 Homo sapiens miR-4646-5p Targets (miRBase)

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGGTA--------------
ACTGGGAAGAGGAGCTGAGGGA