Information for 3-GGKTWDKT (Motif 5)


Reverse Opposite:

p-value:1e-435
log p-value:-1.004e+03
Information Content per bp:1.555
Number of Target Sequences with motif30078.0
Percentage of Target Sequences with motif37.28%
Number of Background Sequences with motif212678.1
Percentage of Background Sequences with motif29.52%
Average Position of motif in Targets156.7 +/- 175.8bp
Average Position of motif in Background135.8 +/- 144.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-609 MIMAT0003277 Homo sapiens miR-609 Targets (miRBase)

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGKTWDKT-----------
AGGGTGTTTCTCTCATCTCT

hsa-miR-4455 MIMAT0018977 Homo sapiens miR-4455 Targets (miRBase)

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGKTWDKT--------
AGGGTGTGTGTGTTTTT

hsa-miR-3667-5p MIMAT0018089 Homo sapiens miR-3667-5p Targets (miRBase)

Match Rank:3
Score:0.55
Offset:-14
Orientation:forward strand
Alignment:--------------GGKTWDKT
ACCTTCTCCTCAATGGGTCTTT

hsa-miR-193a-5p MIMAT0004614 Homo sapiens miR-193a-5p Targets (miRBase)

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGKTWDKT-------------
TGGGTCTTTGCGGGCGAGATGA

hsa-miR-4483 MIMAT0019017 Homo sapiens miR-4483 Targets (miRBase)

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGKTWDKT--------
GGGGTGGTCTGTTGTTG

hsa-miR-4651 MIMAT0019715 Homo sapiens miR-4651 Targets (miRBase)

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGKTWDKT----------
CGGGGTGGGTGAGGTCGGGC

hsa-miR-548d-3p MIMAT0003323 Homo sapiens miR-548d-3p Targets (miRBase)

Match Rank:7
Score:0.53
Offset:-13
Orientation:forward strand
Alignment:-------------GGKTWDKT-
GCAAAAGAAACTGTGGTTTTTG

hsa-miR-495 MIMAT0002817 Homo sapiens miR-495 Targets (miRBase)

Match Rank:8
Score:0.52
Offset:-13
Orientation:forward strand
Alignment:-------------GGKTWDKT-
AAGAAGTGCACCATGTTTGTTT

hsa-miR-1193 MIMAT0015049 Homo sapiens miR-1193 Targets (miRBase)

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGKTWDKT---------------
GGGATGGTAGACCGGTGACGTGC

hsa-miR-1293 MIMAT0005883 Homo sapiens miR-1293 Targets (miRBase)

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGKTWDKT-------------
TGGGTGGTCTGGAGATTTGTGC