Information for 9-CCCCCC (Motif 8)


Reverse Opposite:

p-value:1e-58
log p-value:-1.343e+02
Information Content per bp:1.530
Number of Target Sequences with motif546.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif1759.8
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets19.9 +/- 7.8bp
Average Position of motif in Background20.5 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4472 MIMAT0018999 Homo sapiens miR-4472 Targets (miRBase)

Match Rank:1
Score:0.74
Offset:-9
Orientation:forward strand
Alignment:---------CCCCCC---
AAAACAACACCCCCCACC

hsa-miR-4525 MIMAT0019064 Homo sapiens miR-4525 Targets (miRBase)

Match Rank:2
Score:0.72
Offset:-15
Orientation:forward strand
Alignment:---------------CCCCCC
AACCAGCATGCACATCCCCCC

hsa-miR-3679-3p MIMAT0018105 Homo sapiens miR-3679-3p Targets (miRBase)

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CCCCCC-------------
CTTCCCCCCAGTAATCTTCATC

hsa-miR-4447 MIMAT0018966 Homo sapiens miR-4447 Targets (miRBase)

Match Rank:4
Score:0.68
Offset:-8
Orientation:forward strand
Alignment:--------CCCCCC---
AAACAACAGCCCCCACC

hsa-miR-4278 MIMAT0016910 Homo sapiens miR-4278 Targets (miRBase)

Match Rank:5
Score:0.67
Offset:-9
Orientation:forward strand
Alignment:---------CCCCCC---
CAAGGGCAAACCCCCTAG

hsa-miR-4488 MIMAT0019022 Homo sapiens miR-4488 Targets (miRBase)

Match Rank:6
Score:0.67
Offset:-12
Orientation:forward strand
Alignment:------------CCCCCC
CGCCGGAGCCCGCCCCCT

hsa-miR-625 MIMAT0003294 Homo sapiens miR-625 Targets (miRBase)

Match Rank:7
Score:0.65
Offset:-15
Orientation:forward strand
Alignment:---------------CCCCCC
GGACTATAGAACTTTCCCCCT

hsa-miR-1275 MIMAT0005929 Homo sapiens miR-1275 Targets (miRBase)

Match Rank:8
Score:0.65
Offset:-9
Orientation:forward strand
Alignment:---------CCCCCC--
GACAGCCTCTCCCCCAC

hsa-miR-4483 MIMAT0019017 Homo sapiens miR-4483 Targets (miRBase)

Match Rank:9
Score:0.65
Offset:-10
Orientation:forward strand
Alignment:----------CCCCCC-
CAACAACAGACCACCCC

hsa-miR-4258 MIMAT0016879 Homo sapiens miR-4258 Targets (miRBase)

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCCCCC----------
CCCCGCCACCGCCTTGG