Information for 11-TSRGKAA (Motif 22)


Reverse Opposite:

p-value:1e-213
log p-value:-4.926e+02
Information Content per bp:1.608
Number of Target Sequences with motif13242.0
Percentage of Target Sequences with motif16.41%
Number of Background Sequences with motif89389.4
Percentage of Background Sequences with motif12.41%
Average Position of motif in Targets149.3 +/- 146.2bp
Average Position of motif in Background132.0 +/- 154.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-425* MIMAT0001343 Homo sapiens miR-425* Targets (miRBase)

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TSRGKAA--------------
ATCGGGAATGTCGTGTCCGCCC

hsa-miR-2110 MIMAT0010133 Homo sapiens miR-2110 Targets (miRBase)

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TSRGKAA--------------
TTGGGGAAACGGCCGCTGAGTG

hsa-miR-3915 MIMAT0018189 Homo sapiens miR-3915 Targets (miRBase)

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TSRGKAA--------------
TTGAGGAAAAGATGGTCTTATT

hsa-miR-4774-3p MIMAT0019930 Homo sapiens miR-4774-3p Targets (miRBase)

Match Rank:4
Score:0.60
Offset:-13
Orientation:forward strand
Alignment:-------------TSRGKAA-
TTCTGGCACATGTTAGGCAAT

hsa-miR-545* MIMAT0004785 Homo sapiens miR-545* Targets (miRBase)

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TSRGKAA---------------
TCAGTAAATGTTTATTAGATGA

hsa-miR-4725-3p MIMAT0019844 Homo sapiens miR-4725-3p Targets (miRBase)

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TSRGKAA---------------
TGGGGAAGGCGTCAGTGTCGGG

hsa-miR-3686 MIMAT0018114 Homo sapiens miR-3686 Targets (miRBase)

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TSRGKAA--------------
ATCTGTAAGAGAAAGTAAATGA

hsa-miR-4797-3p MIMAT0019973 Homo sapiens miR-4797-3p Targets (miRBase)

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TSRGKAA------------
TCTCAGTAAGTGGCACTCTGT

hsa-miR-182 MIMAT0000259 Homo sapiens miR-182 Targets (miRBase)

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TSRGKAA----------------
TTTGGCAATGGTAGAACTCACACT

hsa-let-7i* MIMAT0004585 Homo sapiens let-7i* Targets (miRBase)

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TSRGKAA--------------
CTGCGCAAGCTACTGCCTTGCT