Information for 5-GGKKTAATT (Motif 13)


Reverse Opposite:

p-value:1e-389
log p-value:-8.970e+02
Information Content per bp:1.602
Number of Target Sequences with motif33974.0
Percentage of Target Sequences with motif39.31%
Number of Background Sequences with motif241088.0
Percentage of Background Sequences with motif32.09%
Average Position of motif in Targets148.7 +/- 156.2bp
Average Position of motif in Background140.8 +/- 146.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4275 MIMAT0016905 Homo sapiens miR-4275 Targets (miRBase)

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GGKKTAATT--
AAAGAAGTGGTAATTGG

hsa-miR-223* MIMAT0004570 Homo sapiens miR-223* Targets (miRBase)

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGKKTAATT-------------
CGTGTATTTGACAAGCTGAGTT

hsa-miR-425 MIMAT0003393 Homo sapiens miR-425 Targets (miRBase)

Match Rank:3
Score:0.61
Offset:-14
Orientation:forward strand
Alignment:--------------GGKKTAATT
TCAACGGGAGTGATCGTGTCATT

hsa-miR-363 MIMAT0000707 Homo sapiens miR-363 Targets (miRBase)

Match Rank:4
Score:0.60
Offset:-13
Orientation:forward strand
Alignment:-------------GGKKTAATT
TACAGATGGATACCGTGCAATT

hsa-miR-4775 MIMAT0019931 Homo sapiens miR-4775 Targets (miRBase)

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGKKTAATT----------------
---TTAATTTTTTGTTTCGGTCACT

hsa-miR-183* MIMAT0004560 Homo sapiens miR-183* Targets (miRBase)

Match Rank:6
Score:0.59
Offset:-10
Orientation:forward strand
Alignment:----------GGKKTAATT---
TTATGGCCCTTCGGTAATTCAC

hsa-miR-302a* MIMAT0000683 Homo sapiens miR-302a* Targets (miRBase)

Match Rank:7
Score:0.58
Offset:-14
Orientation:forward strand
Alignment:--------------GGKKTAATT
AGCAAGTACATCCACGTTTAAGT

hsa-miR-367 MIMAT0000719 Homo sapiens miR-367 Targets (miRBase)

Match Rank:8
Score:0.58
Offset:-13
Orientation:forward strand
Alignment:-------------GGKKTAATT
TCACCATTGCTAAAGTGCAATT

hsa-miR-513a-3p MIMAT0004777 Homo sapiens miR-513a-3p Targets (miRBase)

Match Rank:9
Score:0.56
Offset:-12
Orientation:forward strand
Alignment:------------GGKKTAATT--
CCTTCTCAGAAAGGTGAAATTTA

hsa-miR-323-3p MIMAT0000755 Homo sapiens miR-323-3p Targets (miRBase)

Match Rank:10
Score:0.56
Offset:-10
Orientation:forward strand
Alignment:----------GGKKTAATT--
AGAGGTCGACCGTGTAATGTG