Information for 11-CAACAAC (Motif 9)


Reverse Opposite:

p-value:1e-40
log p-value:-9.284e+01
Information Content per bp:1.530
Number of Target Sequences with motif417.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1416.6
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets20.0 +/- 10.3bp
Average Position of motif in Background20.9 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-1273g MIMAT0020602 Homo sapiens miR-1273g Targets (miRBase)

Match Rank:1
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------CAACAAC-
ACTTACTGCAGCCTCAACCACC

hsa-miR-4703-3p MIMAT0019802 Homo sapiens miR-4703-3p Targets (miRBase)

Match Rank:2
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------CAACAAC-
GTGGCAATACAATACAACTACA

hsa-miR-3065-5p MIMAT0015066 Homo sapiens miR-3065-5p Targets (miRBase)

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAACAAC---------------
TCAACAAAATCACTGATGCTGGA

hsa-miR-382 MIMAT0000737 Homo sapiens miR-382 Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-12
Orientation:forward strand
Alignment:------------CAACAAC---
CGAATCCACCACGAACAACTTC

hsa-miR-196a* MIMAT0004562 Homo sapiens miR-196a* Targets (miRBase)

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CAACAAC------------
CGGCAACAAGAAACTGCCTGAG

hsa-miR-4687-3p MIMAT0019775 Homo sapiens miR-4687-3p Targets (miRBase)

Match Rank:6
Score:0.63
Offset:-12
Orientation:forward strand
Alignment:------------CAACAAC--
GCCTGCCCCCTCCAACAGCCA

hsa-miR-21* MIMAT0004494 Homo sapiens miR-21* Targets (miRBase)

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAACAAC--------------
CAACACCAGTCGATGGGCTGT

hsa-miR-548ae MIMAT0018954 Homo sapiens miR-548ae Targets (miRBase)

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAACAAC--------------
CAAAAACTGCAATTACTTTCA

hsa-miR-7-2* MIMAT0004554 Homo sapiens miR-7-2* Targets (miRBase)

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAACAAC---------------
CAACAAATCCCAGTCTACCTAA

hsa-miR-7-1* MIMAT0004553 Homo sapiens miR-7-1* Targets (miRBase)

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAACAAC---------------
CAACAAATCACAGTCTGCCATA