Information for 3-YTTKYAGGT (Motif 3)


Reverse Opposite:

p-value:1e-62
log p-value:-1.432e+02
Information Content per bp:1.579
Number of Target Sequences with motif1189.0
Percentage of Target Sequences with motif12.37%
Number of Background Sequences with motif5755.0
Percentage of Background Sequences with motif7.21%
Average Position of motif in Targets25.3 +/- 15.7bp
Average Position of motif in Background28.3 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-875-3p MIMAT0004923 Homo sapiens miR-875-3p Targets (miRBase)

Match Rank:1
Score:0.65
Offset:-13
Orientation:forward strand
Alignment:-------------YTTKYAGGT
CACAACCTCAGTGTTTCCAGG-

hsa-miR-4766-5p MIMAT0019917 Homo sapiens miR-4766-5p Targets (miRBase)

Match Rank:2
Score:0.64
Offset:-13
Orientation:forward strand
Alignment:-------------YTTKYAGGT
AACACCAACTGCTCTTTCAGA-

hsa-miR-2276 MIMAT0011775 Homo sapiens miR-2276 Targets (miRBase)

Match Rank:3
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------YTTKYAGGT
CCTCGCCTCTGACACTTGCAGA-

hsa-miR-1283 MIMAT0005799 Homo sapiens miR-1283 Targets (miRBase)

Match Rank:4
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------YTTKYAGGT
AGAAAGCGCTTTCCTTTGTAGA-

hsa-miR-5047 MIMAT0020541 Homo sapiens miR-5047 Targets (miRBase)

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:YTTKYAGGT-------------
-TTGCAGCTGCGGTTGTAAGGT

hsa-miR-4772-3p MIMAT0019927 Homo sapiens miR-4772-3p Targets (miRBase)

Match Rank:6
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------YTTKYAGGT
TCTGATCAGGCAAAGTTGCAGG-

hsa-miR-3942-3p MIMAT0019230 Homo sapiens miR-3942-3p Targets (miRBase)

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:YTTKYAGGT-------------
-TTTCAGATAACAGTATTACAT

hsa-miR-619 MIMAT0003288 Homo sapiens miR-619 Targets (miRBase)

Match Rank:8
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------YTTKYAGGT-
ACTGGGCACAAACATGTCCAGGTC

hsa-miR-1205 MIMAT0005869 Homo sapiens miR-1205 Targets (miRBase)

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:YTTKYAGGT-----------
TCTGCAGGGTTTGCTTTGAG

hsa-miR-1301 MIMAT0005797 Homo sapiens miR-1301 Targets (miRBase)

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YTTKYAGGT----------------
-TTGCAGCTGCCTGGGAGTGACTTC