Information for 8-TTTGCT (Motif 10)


Reverse Opposite:

p-value:1e-19
log p-value:-4.409e+01
Information Content per bp:1.518
Number of Target Sequences with motif1588.0
Percentage of Target Sequences with motif18.56%
Number of Background Sequences with motif10626.5
Percentage of Background Sequences with motif14.75%
Average Position of motif in Targets25.0 +/- 16.7bp
Average Position of motif in Background28.6 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-545 MIMAT0003165 Homo sapiens miR-545 Targets (miRBase)

Match Rank:1
Score:0.77
Offset:-14
Orientation:forward strand
Alignment:--------------TTTGCT--
GCACACAATAAATGTTTGCTGA

hsa-miR-548p MIMAT0005934 Homo sapiens miR-548p Targets (miRBase)

Match Rank:2
Score:0.77
Offset:-15
Orientation:forward strand
Alignment:---------------TTTGCT-
AAAGTAACTGCAGTTTTTGCTA

hsa-miR-7-1* MIMAT0004553 Homo sapiens miR-7-1* Targets (miRBase)

Match Rank:3
Score:0.64
Offset:-15
Orientation:forward strand
Alignment:---------------TTTGCT-
TATGGCAGACTGTGATTTGTTG

hsa-miR-7-2* MIMAT0004554 Homo sapiens miR-7-2* Targets (miRBase)

Match Rank:4
Score:0.64
Offset:-15
Orientation:forward strand
Alignment:---------------TTTGCT-
TTAGGTAGACTGGGATTTGTTG

hsa-miR-495 MIMAT0002817 Homo sapiens miR-495 Targets (miRBase)

Match Rank:5
Score:0.64
Offset:-15
Orientation:forward strand
Alignment:---------------TTTGCT-
AAGAAGTGCACCATGTTTGTTT

hsa-miR-4468 MIMAT0018995 Homo sapiens miR-4468 Targets (miRBase)

Match Rank:6
Score:0.64
Offset:-10
Orientation:forward strand
Alignment:----------TTTGCT--
ATCTCATCCTTCTGCTCT

hsa-miR-218 MIMAT0000275 Homo sapiens miR-218 Targets (miRBase)

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCT--------------
TTGTGCTTGATCTAACCATGT

hsa-miR-3065-5p MIMAT0015066 Homo sapiens miR-3065-5p Targets (miRBase)

Match Rank:8
Score:0.64
Offset:-15
Orientation:forward strand
Alignment:---------------TTTGCT--
TCCAGCATCAGTGATTTTGTTGA

hsa-miR-610 MIMAT0003278 Homo sapiens miR-610 Targets (miRBase)

Match Rank:9
Score:0.64
Offset:-13
Orientation:forward strand
Alignment:-------------TTTGCT--
TCCCAGCACACATTTAGCTCA

hsa-miR-4662a-5p MIMAT0019731 Homo sapiens miR-4662a-5p Targets (miRBase)

Match Rank:10
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------TTTGCT--
CTAAAGATGGACAATTGGCTAA