Information for 7-YMTTGGG (Motif 13)


Reverse Opposite:

p-value:1e-323
log p-value:-7.458e+02
Information Content per bp:1.505
Number of Target Sequences with motif44516.0
Percentage of Target Sequences with motif55.17%
Number of Background Sequences with motif346004.8
Percentage of Background Sequences with motif48.03%
Average Position of motif in Targets157.1 +/- 163.4bp
Average Position of motif in Background133.6 +/- 147.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3189-3p MIMAT0015071 Homo sapiens miR-3189-3p Targets (miRBase)

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-YMTTGGG-------------
CCCTTGGGTCTGATGGGGTAG

hsa-miR-323b-3p MIMAT0015050 Homo sapiens miR-323b-3p Targets (miRBase)

Match Rank:2
Score:0.66
Offset:-15
Orientation:forward strand
Alignment:---------------YMTTGGG
AAGAGGTCGACCGTGTATTGGG

hsa-miR-4733-5p MIMAT0019857 Homo sapiens miR-4733-5p Targets (miRBase)

Match Rank:3
Score:0.65
Offset:-12
Orientation:forward strand
Alignment:------------YMTTGGG---
CACCGGGTCTAGCATTGGGATT

hsa-miR-4260 MIMAT0016881 Homo sapiens miR-4260 Targets (miRBase)

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:YMTTGGG-------------
-CTTGGGGCATGGAGTCCCA

hsa-miR-635 MIMAT0003305 Homo sapiens miR-635 Targets (miRBase)

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:YMTTGGG----------------
ACTTGGGCACTGAAACAATGTCC

hsa-miR-135a* MIMAT0004595 Homo sapiens miR-135a* Targets (miRBase)

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YMTTGGG---------------
TATAGGGATTGGAGCCGTGGCG

hsa-miR-4740-3p MIMAT0019870 Homo sapiens miR-4740-3p Targets (miRBase)

Match Rank:7
Score:0.58
Offset:-14
Orientation:forward strand
Alignment:--------------YMTTGGG-
GCAGGGACGGATCCTCTCGGGC

hsa-miR-3675-5p MIMAT0018098 Homo sapiens miR-3675-5p Targets (miRBase)

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:YMTTGGG----------------
TATGGGGCTTCTGTAGAGATTTC

hsa-miR-3122 MIMAT0014984 Homo sapiens miR-3122 Targets (miRBase)

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:YMTTGGG----------------
-GTTGGGACAAGAGGACGGTCTT

hsa-miR-3913-5p MIMAT0018187 Homo sapiens miR-3913-5p Targets (miRBase)

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:YMTTGGG----------------
-TTTGGGACTGATCTTGATGTCT