Information for 3-TACGS (Motif 6)


Reverse Opposite:

p-value:1e-657
log p-value:-1.513e+03
Information Content per bp:1.651
Number of Target Sequences with motif48918.0
Percentage of Target Sequences with motif56.60%
Number of Background Sequences with motif351205.4
Percentage of Background Sequences with motif46.75%
Average Position of motif in Targets153.0 +/- 157.8bp
Average Position of motif in Background131.1 +/- 146.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3678-5p MIMAT0018102 Homo sapiens miR-3678-5p Targets (miRBase)

Match Rank:1
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------TACGS-
CACAGCAGAGTTTGTACGGA

hsa-miR-585 MIMAT0003250 Homo sapiens miR-585 Targets (miRBase)

Match Rank:2
Score:0.62
Offset:-11
Orientation:forward strand
Alignment:-----------TACGS---
TAGCATACAGATACGCCCA

hsa-miR-99b MIMAT0000689 Homo sapiens miR-99b Targets (miRBase)

Match Rank:3
Score:0.62
Offset:-14
Orientation:forward strand
Alignment:--------------TACGS---
CGCAAGGTCGGTTCTACGGGTG

hsa-miR-100 MIMAT0000098 Homo sapiens miR-100 Targets (miRBase)

Match Rank:4
Score:0.62
Offset:-14
Orientation:forward strand
Alignment:--------------TACGS---
CACAAGTTCGGATCTACGGGTT

hsa-miR-99a MIMAT0000097 Homo sapiens miR-99a Targets (miRBase)

Match Rank:5
Score:0.62
Offset:-14
Orientation:forward strand
Alignment:--------------TACGS---
CACAAGATCGGATCTACGGGTT

hsa-miR-4788 MIMAT0019958 Homo sapiens miR-4788 Targets (miRBase)

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TACGS----------------
TTACGGACCAGCTAAGGGAGGC

hsa-let-7e* MIMAT0004485 Homo sapiens let-7e* Targets (miRBase)

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TACGS--------------
CTATACGGCCTCCTAGCTTTCC

hsa-miR-4466 MIMAT0018993 Homo sapiens miR-4466 Targets (miRBase)

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TACGS----------
GGGTGCGGGCCGGCGGGG

hsa-miR-126 MIMAT0000445 Homo sapiens miR-126 Targets (miRBase)

Match Rank:9
Score:0.56
Offset:-17
Orientation:forward strand
Alignment:-----------------TACGS
CGCATTATTACTCACGGTACGA

hsa-miR-4278 MIMAT0016910 Homo sapiens miR-4278 Targets (miRBase)

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TACGS------------
CTAGGGGGTTTGCCCTTG