Information for 13-CWACCATC (Motif 13)


Reverse Opposite:

p-value:1e-15
log p-value:-3.545e+01
Information Content per bp:1.685
Number of Target Sequences with motif449.0
Percentage of Target Sequences with motif5.25%
Number of Background Sequences with motif2468.8
Percentage of Background Sequences with motif3.43%
Average Position of motif in Targets30.9 +/- 22.1bp
Average Position of motif in Background28.4 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-1193 MIMAT0015049 Homo sapiens miR-1193 Targets (miRBase)

Match Rank:1
Score:0.75
Offset:-13
Orientation:forward strand
Alignment:-------------CWACCATC--
GCACGTCACCGGTCTACCATCCC

hsa-miR-181c* MIMAT0004559 Homo sapiens miR-181c* Targets (miRBase)

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CWACCATC---------------
-AACCATCGACCGTTGAGTGGAC

hsa-miR-1273g MIMAT0020602 Homo sapiens miR-1273g Targets (miRBase)

Match Rank:3
Score:0.69
Offset:-14
Orientation:forward strand
Alignment:--------------CWACCATC
ACTTACTGCAGCCTCAACCACC

hsa-miR-634 MIMAT0003304 Homo sapiens miR-634 Targets (miRBase)

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CWACCATC---------------
-AACCAGCACCCCAACTTTGGAC

hsa-miR-4456 MIMAT0018978 Homo sapiens miR-4456 Targets (miRBase)

Match Rank:5
Score:0.64
Offset:-9
Orientation:forward strand
Alignment:---------CWACCATC
AAAAGGAAGCCACCAGG

hsa-miR-4536 MIMAT0019078 Homo sapiens miR-4536 Targets (miRBase)

Match Rank:6
Score:0.63
Offset:-13
Orientation:forward strand
Alignment:-------------CWACCATC
ATCGTGCATATATCTACCACA

hsa-miR-508-3p MIMAT0002880 Homo sapiens miR-508-3p Targets (miRBase)

Match Rank:7
Score:0.62
Offset:-14
Orientation:forward strand
Alignment:--------------CWACCATC-
TCTACTCCAAAAGGCTACAATCA

hsa-miR-4769-3p MIMAT0019923 Homo sapiens miR-4769-3p Targets (miRBase)

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CWACCATC-------------
TCTGCCATCCTCCCTCCCCTAC

hsa-miR-876-3p MIMAT0004925 Homo sapiens miR-876-3p Targets (miRBase)

Match Rank:9
Score:0.62
Offset:-13
Orientation:forward strand
Alignment:-------------CWACCATC-
TGAATTACTTTGTAAACCACCA

hsa-miR-181a* MIMAT0000270 Homo sapiens miR-181a* Targets (miRBase)

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CWACCATC----------------
--ACCATCGACCGTTGATTGTACC