Information for 12-CTTACAATCA (Motif 28)


Reverse Opposite:

p-value:1e-124
log p-value:-2.874e+02
Information Content per bp:1.939
Number of Target Sequences with motif1728.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif7623.8
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets153.1 +/- 129.9bp
Average Position of motif in Background138.2 +/- 144.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-508-3p MIMAT0002880 Homo sapiens miR-508-3p Targets (miRBase)

Match Rank:1
Score:0.73
Offset:-13
Orientation:forward strand
Alignment:-------------CTTACAATCA
TCTACTCCAAAAGGCTACAATCA

hsa-miR-4666-3p MIMAT0019742 Homo sapiens miR-4666-3p Targets (miRBase)

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTTACAATCA-----------
CATACAATCTGACATGTATTT

hsa-miR-600 MIMAT0003268 Homo sapiens miR-600 Targets (miRBase)

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTTACAATCA------------
ACTTACAGACAAGAGCCTTGCTC

hsa-miR-4263 MIMAT0016898 Homo sapiens miR-4263 Targets (miRBase)

Match Rank:4
Score:0.64
Offset:-10
Orientation:forward strand
Alignment:----------CTTACAATCA
GGCCAAGGCACTTAGAAT--

hsa-miR-4705 MIMAT0019805 Homo sapiens miR-4705 Targets (miRBase)

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTTACAATCA---------------
---TCAATCACTTGGTAATTGCTGT

hsa-miR-219-5p MIMAT0000276 Homo sapiens miR-219-5p Targets (miRBase)

Match Rank:6
Score:0.61
Offset:-11
Orientation:forward strand
Alignment:-----------CTTACAATCA
AGAATTGCGTTTGGACAATCA

hsa-miR-4262 MIMAT0016894 Homo sapiens miR-4262 Targets (miRBase)

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTTACAATCA---------
--GACATTCAGACTACCTG

hsa-miR-4782-3p MIMAT0019945 Homo sapiens miR-4782-3p Targets (miRBase)

Match Rank:8
Score:0.60
Offset:-12
Orientation:forward strand
Alignment:------------CTTACAATCA
GTTCTAGATATGAAGACAATCA

hsa-miR-181c MIMAT0000258 Homo sapiens miR-181c Targets (miRBase)

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTTACAATCA--------------
--AACATTCAACCTGTCGGTGAGT

hsa-miR-181b MIMAT0000257 Homo sapiens miR-181b Targets (miRBase)

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTTACAATCA---------------
--AACATTCATTGCTGTCGGTGGGT