Information for 12-TAATAAT (Motif 11)


Reverse Opposite:

p-value:1e-34
log p-value:-7.906e+01
Information Content per bp:1.530
Number of Target Sequences with motif363.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1248.8
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets19.2 +/- 10.5bp
Average Position of motif in Background21.1 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-126* MIMAT0000444 Homo sapiens miR-126* Targets (miRBase)

Match Rank:1
Score:0.87
Offset:-13
Orientation:forward strand
Alignment:-------------TAATAAT-
CGCGTACCAAAAGTAATAATG

hsa-miR-4795-3p MIMAT0019969 Homo sapiens miR-4795-3p Targets (miRBase)

Match Rank:2
Score:0.79
Offset:-13
Orientation:forward strand
Alignment:-------------TAATAAT--
ATCCAGAAGTGGCTAATAATAT

hsa-miR-944 MIMAT0004987 Homo sapiens miR-944 Targets (miRBase)

Match Rank:3
Score:0.72
Offset:-13
Orientation:forward strand
Alignment:-------------TAATAAT--
CTCATCCGATGTACAATAATTT

hsa-miR-633 MIMAT0003303 Homo sapiens miR-633 Targets (miRBase)

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAATAAT---------------
CTAATAGTATCTACCACAATAAA

hsa-miR-369-3p MIMAT0000721 Homo sapiens miR-369-3p Targets (miRBase)

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TAATAAT---------------
-AATAATACATGGTTGATCTTT

hsa-miR-656 MIMAT0003332 Homo sapiens miR-656 Targets (miRBase)

Match Rank:6
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------TAATAAT
AGAGGTTGACTGTATAATATT

hsa-miR-16-2* MIMAT0004518 Homo sapiens miR-16-2* Targets (miRBase)

Match Rank:7
Score:0.62
Offset:-13
Orientation:forward strand
Alignment:-------------TAATAAT--
TAAAGCAGCACAGTAATATTGG

hsa-miR-496 MIMAT0002818 Homo sapiens miR-496 Targets (miRBase)

Match Rank:8
Score:0.62
Offset:-13
Orientation:forward strand
Alignment:-------------TAATAAT--
GAGATTGGCCATGTAATACTCA

hsa-miR-16-1* MIMAT0004489 Homo sapiens miR-16-1* Targets (miRBase)

Match Rank:9
Score:0.62
Offset:-13
Orientation:forward strand
Alignment:-------------TAATAAT--
TCAGCAGCACAGTTAATACTGG

hsa-miR-200b MIMAT0000318 Homo sapiens miR-200b Targets (miRBase)

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAATAAT---------------
TAATACTGCCTGGTAATGATGA