Information for 7-TGATGG (Motif 13)


Reverse Opposite:

p-value:1e-25
log p-value:-5.892e+01
Information Content per bp:1.528
Number of Target Sequences with motif2092.0
Percentage of Target Sequences with motif21.76%
Number of Background Sequences with motif13804.4
Percentage of Background Sequences with motif17.30%
Average Position of motif in Targets30.1 +/- 19.6bp
Average Position of motif in Background28.4 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4530 MIMAT0019069 Homo sapiens miR-4530 Targets (miRBase)

Match Rank:1
Score:0.69
Offset:-11
Orientation:forward strand
Alignment:-----------TGATGG-
CGCTCCCGTCCTGCTGGG

hsa-miR-634 MIMAT0003304 Homo sapiens miR-634 Targets (miRBase)

Match Rank:2
Score:0.66
Offset:-14
Orientation:forward strand
Alignment:--------------TGATGG--
GTCCAAAGTTGGGGTGCTGGTT

hsa-miR-338-3p MIMAT0000763 Homo sapiens miR-338-3p Targets (miRBase)

Match Rank:3
Score:0.66
Offset:-15
Orientation:forward strand
Alignment:---------------TGATGG-
CAACAAAATCACTGATGCTGGA

hsa-miR-3692* MIMAT0018121 Homo sapiens miR-3692* Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGATGG----------------
CCTGCTGGTCAGGAGTGGATACTG

hsa-miR-4529-5p MIMAT0019236 Homo sapiens miR-4529-5p Targets (miRBase)

Match Rank:5
Score:0.65
Offset:-13
Orientation:forward strand
Alignment:-------------TGATGG---
TTCATTGGACTGCTGATGGCCT

hsa-miR-205 MIMAT0000266 Homo sapiens miR-205 Targets (miRBase)

Match Rank:6
Score:0.65
Offset:-15
Orientation:forward strand
Alignment:---------------TGATGG-
CAGACTCCGGTGGAATGAAGGA

hsa-miR-3134 MIMAT0015000 Homo sapiens miR-3134 Targets (miRBase)

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGATGG-----------------
TGATGGATAAAAGACTACATATT

hsa-miR-4781-3p MIMAT0019943 Homo sapiens miR-4781-3p Targets (miRBase)

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGATGG--------------
AATGTTGGAATCCTCGCTAGAG

hsa-miR-4456 MIMAT0018978 Homo sapiens miR-4456 Targets (miRBase)

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGATGG---------
CCTGGTGGCTTCCTTTT

hsa-miR-4705 MIMAT0019805 Homo sapiens miR-4705 Targets (miRBase)

Match Rank:10
Score:0.61
Offset:-15
Orientation:forward strand
Alignment:---------------TGATGG-
ACAGCAATTACCAAGTGATTGA