Information for 5-TCGAGCA (Motif 7)


Reverse Opposite:

p-value:1e-426
log p-value:-9.811e+02
Information Content per bp:1.799
Number of Target Sequences with motif51644.0
Percentage of Target Sequences with motif64.01%
Number of Background Sequences with motif402998.7
Percentage of Background Sequences with motif55.94%
Average Position of motif in Targets155.8 +/- 157.2bp
Average Position of motif in Background132.4 +/- 151.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.65
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-517c MIMAT0002866 Homo sapiens miR-517c Targets (miRBase)

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCGAGCA--------------
ATCGTGCATCCTTTTAGAGTGT

hsa-miR-517a MIMAT0002852 Homo sapiens miR-517a Targets (miRBase)

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCGAGCA--------------
ATCGTGCATCCCTTTAGAGTGT

hsa-miR-516a-5p MIMAT0004770 Homo sapiens miR-516a-5p Targets (miRBase)

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCGAGCA-------------
TTCTCGAGGAAAGAAGCACTTTC

hsa-miR-3907 MIMAT0018179 Homo sapiens miR-3907 Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-12
Orientation:forward strand
Alignment:------------TCGAGCA---
TGTGAGCCAGCCTGGAGCACCT

hsa-miR-151b MIMAT0010214 Homo sapiens miR-151b Targets (miRBase)

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCGAGCA-----------
TCGAGGAGCTCACAGTCT

hsa-miR-4444 MIMAT0018962 Homo sapiens miR-4444 Targets (miRBase)

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCGAGCA----------
CTCGAGTTGGAAGAGGCG

hsa-miR-1273e MIMAT0018079 Homo sapiens miR-1273e Targets (miRBase)

Match Rank:7
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------TCGAGCA-
TCCACTTCCTGGGTTCAAGCAA

hsa-miR-4732-5p MIMAT0019855 Homo sapiens miR-4732-5p Targets (miRBase)

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCGAGCA--------------
TGTAGAGCAGGGAGCAGGAAGCT

hsa-miR-151-5p MIMAT0004697 Homo sapiens miR-151-5p Targets (miRBase)

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCGAGCA--------------
TCGAGGAGCTCACAGTCTAGT

hsa-miR-4468 MIMAT0018995 Homo sapiens miR-4468 Targets (miRBase)

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCGAGCA------------
-AGAGCAGAAGGATGAGAT