Information for 10-TYGGMS (Motif 19)


Reverse Opposite:

p-value:1e-290
log p-value:-6.692e+02
Information Content per bp:1.676
Number of Target Sequences with motif21329.0
Percentage of Target Sequences with motif24.68%
Number of Background Sequences with motif145178.6
Percentage of Background Sequences with motif19.32%
Average Position of motif in Targets157.1 +/- 158.2bp
Average Position of motif in Background135.7 +/- 151.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3917 MIMAT0018191 Homo sapiens miR-3917 Targets (miRBase)

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TYGGMS------------
GCTCGGACTGAGCAGGTGGG

hsa-miR-4529-3p MIMAT0019068 Homo sapiens miR-4529-3p Targets (miRBase)

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TYGGMS--------------
ATTGGACTGCTGATGGCCCGT

hsa-miR-4520b-3p MIMAT0020300 Homo sapiens miR-4520b-3p Targets (miRBase)

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TYGGMS---------------
TTTGGACAGAAAACACGCAGGT

hsa-miR-3145-5p MIMAT0019205 Homo sapiens miR-3145-5p Targets (miRBase)

Match Rank:4
Score:0.61
Offset:-14
Orientation:forward strand
Alignment:--------------TYGGMS--
TGAGTTTTGAGTGTTTGGAGTT

hsa-miR-519e* MIMAT0002828 Homo sapiens miR-519e* Targets (miRBase)

Match Rank:5
Score:0.61
Offset:-14
Orientation:forward strand
Alignment:--------------TYGGMS--
GAAAGTGCTCCCTTTTGGAGAA

hsa-miR-432 MIMAT0002814 Homo sapiens miR-432 Targets (miRBase)

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TYGGMS---------------
TCTTGGAGTAGGTCATTGGGTGG

hsa-miR-1469 MIMAT0007347 Homo sapiens miR-1469 Targets (miRBase)

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TYGGMS---------------
CTCGGCGCGGGGCGCGGGCTCC

hsa-miR-1307 MIMAT0005951 Homo sapiens miR-1307 Targets (miRBase)

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TYGGMS--------------
ACTCGGCGTGGCGTCGGTCGTG

hsa-miR-3926 MIMAT0018201 Homo sapiens miR-3926 Targets (miRBase)

Match Rank:9
Score:0.60
Offset:-14
Orientation:forward strand
Alignment:--------------TYGGMS-
TCTCTGCCTGCTTTTTGGCCA

hsa-miR-515-5p MIMAT0002826 Homo sapiens miR-515-5p Targets (miRBase)

Match Rank:10
Score:0.60
Offset:-16
Orientation:forward strand
Alignment:----------------TYGGMS--
CAGAAAGTGCTTTCTTTTGGAGAA