Information for 11-ATGGAATGGA (Motif 7)


Reverse Opposite:

p-value:1e-58
log p-value:-1.355e+02
Information Content per bp:1.965
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif22.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.5 +/- 8.9bp
Average Position of motif in Background22.7 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3673 MIMAT0018096 Homo sapiens miR-3673 Targets (miRBase)

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:ATGGAATGGA-----------
ATGGAATGTATATACGGAATA

hsa-miR-3202 MIMAT0015089 Homo sapiens miR-3202 Targets (miRBase)

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATGGAATGGA-------------
-TGGAAGGGAGAAGAGCTTTAAT

hsa-miR-206 MIMAT0000462 Homo sapiens miR-206 Targets (miRBase)

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATGGAATGGA-------------
-TGGAATGTAAGGAAGTGTGTGG

hsa-miR-1 MIMAT0000416 Homo sapiens miR-1 Targets (miRBase)

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATGGAATGGA-------------
-TGGAATGTAAAGAAGTATGTAT

hsa-miR-885-5p MIMAT0004947 Homo sapiens miR-885-5p Targets (miRBase)

Match Rank:5
Score:0.65
Offset:-12
Orientation:forward strand
Alignment:------------ATGGAATGGA
AGAGGCAGGGTAGTGTAATGGA

hsa-miR-4694-3p MIMAT0019787 Homo sapiens miR-4694-3p Targets (miRBase)

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATGGAATGGA--------
CAAATGGACAGGATAACACCT

hsa-miR-455-3p MIMAT0004784 Homo sapiens miR-455-3p Targets (miRBase)

Match Rank:7
Score:0.61
Offset:-12
Orientation:forward strand
Alignment:------------ATGGAATGGA
GTGTATATGCCCATGGACTGC-

hsa-miR-4515 MIMAT0019052 Homo sapiens miR-4515 Targets (miRBase)

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATGGAATGGA-------------
-AGGACTGGACTCCCGGCAGCCC

hsa-miR-136 MIMAT0000448 Homo sapiens miR-136 Targets (miRBase)

Match Rank:9
Score:0.61
Offset:-11
Orientation:forward strand
Alignment:-----------ATGGAATGGA--
TCCATCATCAAAACAAATGGAGT

hsa-miR-587 MIMAT0003253 Homo sapiens miR-587 Targets (miRBase)

Match Rank:10
Score:0.61
Offset:-14
Orientation:forward strand
Alignment:--------------ATGGAATGGA
GTGACTCATCACCTATGGAAA---