Information for 7-ATAAAGGCA (Motif 16)


Reverse Opposite:

p-value:1e-337
log p-value:-7.777e+02
Information Content per bp:1.747
Number of Target Sequences with motif58850.0
Percentage of Target Sequences with motif68.09%
Number of Background Sequences with motif460610.8
Percentage of Background Sequences with motif61.31%
Average Position of motif in Targets159.6 +/- 149.6bp
Average Position of motif in Background136.5 +/- 159.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.98
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-548an MIMAT0019079 Homo sapiens miR-548an Targets (miRBase)

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATAAAGGCA------------
-AAAAGGCATTGTGGTTTTTG

hsa-miR-340 MIMAT0004692 Homo sapiens miR-340 Targets (miRBase)

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATAAAGGCA-----------
TTATAAAGCAATGAGACTGATT

hsa-miR-3125 MIMAT0014988 Homo sapiens miR-3125 Targets (miRBase)

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATAAAGGCA------------
-TAGAGGAAGCTGTGGAGAGA

hsa-miR-376a MIMAT0000729 Homo sapiens miR-376a Targets (miRBase)

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATAAAGGCA---------
ATCATAGAGGAAAATCCACGT

hsa-miR-376c MIMAT0000720 Homo sapiens miR-376c Targets (miRBase)

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATAAAGGCA---------
AACATAGAGGAAATTCCACGT

hsa-miR-376b MIMAT0002172 Homo sapiens miR-376b Targets (miRBase)

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATAAAGGCA----------
ATCATAGAGGAAAATCCATGTT

hsa-miR-4796-5p MIMAT0019970 Homo sapiens miR-4796-5p Targets (miRBase)

Match Rank:7
Score:0.60
Offset:-13
Orientation:forward strand
Alignment:-------------ATAAAGGCA
GTAAAGTGACAGAGTATAGACA

hsa-miR-4729 MIMAT0019851 Homo sapiens miR-4729 Targets (miRBase)

Match Rank:8
Score:0.59
Offset:-14
Orientation:forward strand
Alignment:--------------ATAAAGGCA
TAGCTTCCCAACAGATAAATGA-

hsa-miR-3910 MIMAT0018184 Homo sapiens miR-3910 Targets (miRBase)

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATAAAGGCA-------------
--AAAGGCATAAAACCAAGACA

hsa-miR-337-3p MIMAT0000754 Homo sapiens miR-337-3p Targets (miRBase)

Match Rank:10
Score:0.58
Offset:-13
Orientation:forward strand
Alignment:-------------ATAAAGGCA
GAAGAAAGGCATCATATAGGAG