Information for 5-TGGCTG (Motif 14)


Reverse Opposite:

p-value:1e-316
log p-value:-7.280e+02
Information Content per bp:1.818
Number of Target Sequences with motif30270.0
Percentage of Target Sequences with motif37.52%
Number of Background Sequences with motif222352.7
Percentage of Background Sequences with motif30.86%
Average Position of motif in Targets154.2 +/- 168.9bp
Average Position of motif in Background132.2 +/- 148.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.46
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3064-5p MIMAT0019864 Homo sapiens miR-3064-5p Targets (miRBase)

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TGGCTG-------------
TCTGGCTGTTGTGGTGTGCAA

hsa-miR-647 MIMAT0003317 Homo sapiens miR-647 Targets (miRBase)

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTG--------------
GTGGCTGCACTCACTTCCTTC

hsa-miR-3157-5p MIMAT0015031 Homo sapiens miR-3157-5p Targets (miRBase)

Match Rank:3
Score:0.78
Offset:-14
Orientation:forward strand
Alignment:--------------TGGCTG--
AGACTGCACTAGCCTGGCTGAA

hsa-miR-4691-3p MIMAT0019782 Homo sapiens miR-4691-3p Targets (miRBase)

Match Rank:4
Score:0.77
Offset:-16
Orientation:forward strand
Alignment:----------------TGGCTG-
ATGCACTCTCAGTCCGTGGCTGG

hsa-miR-4727-5p MIMAT0019847 Homo sapiens miR-4727-5p Targets (miRBase)

Match Rank:5
Score:0.71
Offset:-13
Orientation:forward strand
Alignment:-------------TGGCTG--
CCACTGTGGAAGCTGGCAGAT

hsa-miR-4769-3p MIMAT0019923 Homo sapiens miR-4769-3p Targets (miRBase)

Match Rank:6
Score:0.71
Offset:-15
Orientation:forward strand
Alignment:---------------TGGCTG-
GTAGGGGAGGGAGGATGGCAGA

hsa-miR-4722-3p MIMAT0019837 Homo sapiens miR-4722-3p Targets (miRBase)

Match Rank:7
Score:0.71
Offset:-14
Orientation:forward strand
Alignment:--------------TGGCTG--
CTGCAGGGAGGTGCTGGCAGGT

hsa-miR-3194-5p MIMAT0015078 Homo sapiens miR-3194-5p Targets (miRBase)

Match Rank:8
Score:0.70
Offset:-12
Orientation:forward strand
Alignment:------------TGGCTG---
CAGCCCTCCTGGTGGCTGGCC

hsa-miR-4687-3p MIMAT0019775 Homo sapiens miR-4687-3p Targets (miRBase)

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGGCTG---------------
TGGCTGTTGGAGGGGGCAGGC

hsa-miR-4258 MIMAT0016879 Homo sapiens miR-4258 Targets (miRBase)

Match Rank:10
Score:0.70
Offset:-9
Orientation:forward strand
Alignment:---------TGGCTG--
CCAAGGCGGTGGCGGGG