Information for 11-YCCATYY (Motif 17)


Reverse Opposite:

p-value:1e-17
log p-value:-4.072e+01
Information Content per bp:1.565
Number of Target Sequences with motif2340.0
Percentage of Target Sequences with motif24.34%
Number of Background Sequences with motif16331.5
Percentage of Background Sequences with motif20.47%
Average Position of motif in Targets22.7 +/- 16.2bp
Average Position of motif in Background29.0 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4534 MIMAT0019073 Homo sapiens miR-4534 Targets (miRBase)

Match Rank:1
Score:0.66
Offset:-10
Orientation:forward strand
Alignment:----------YCCATYY
AGACCCCTCCTCCATCC

hsa-miR-4426 MIMAT0018941 Homo sapiens miR-4426 Targets (miRBase)

Match Rank:2
Score:0.65
Offset:-8
Orientation:forward strand
Alignment:--------YCCATYY--
AAAGTACGTCCATCTTC

hsa-miR-4694-3p MIMAT0019787 Homo sapiens miR-4694-3p Targets (miRBase)

Match Rank:3
Score:0.64
Offset:-13
Orientation:forward strand
Alignment:-------------YCCATYY-
AGGTGTTATCCTGTCCATTTG

hsa-miR-1273f MIMAT0020601 Homo sapiens miR-1273f Targets (miRBase)

Match Rank:4
Score:0.64
Offset:-10
Orientation:forward strand
Alignment:----------YCCATYY--
CACTGCAACCTCCATCTCC

hsa-miR-2392 MIMAT0019043 Homo sapiens miR-2392 Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-11
Orientation:forward strand
Alignment:-----------YCCATYY--
CACCTCTCACCCCCATCCTA

hsa-miR-4662b MIMAT0019736 Homo sapiens miR-4662b Targets (miRBase)

Match Rank:6
Score:0.62
Offset:-13
Orientation:forward strand
Alignment:-------------YCCATYY--
ATTTAGCCAATTGTCCATCTTT

hsa-miR-4506 MIMAT0019042 Homo sapiens miR-4506 Targets (miRBase)

Match Rank:7
Score:0.60
Offset:-13
Orientation:forward strand
Alignment:-------------YCCATYY
TTGCCTCAGACCACCCATTT

hsa-miR-136 MIMAT0000448 Homo sapiens miR-136 Targets (miRBase)

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--YCCATYY--------------
ACTCCATTTGTTTTGATGATGGA

hsa-miR-4533 MIMAT0019072 Homo sapiens miR-4533 Targets (miRBase)

Match Rank:9
Score:0.60
Offset:-14
Orientation:forward strand
Alignment:--------------YCCATYY-
AGCGTCCGGCAACCTCCTTCCA

hsa-miR-184 MIMAT0000454 Homo sapiens miR-184 Targets (miRBase)

Match Rank:10
Score:0.59
Offset:-14
Orientation:forward strand
Alignment:--------------YCCATYY-
ACCCTTATCAGTTCTCCGTCCA