Information for 9-TGGATGGATG (Motif 5)


Reverse Opposite:

p-value:1e-129
log p-value:-2.972e+02
Information Content per bp:1.869
Number of Target Sequences with motif1314.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif4403.0
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets20.7 +/- 9.8bp
Average Position of motif in Background19.2 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-432* MIMAT0002815 Homo sapiens miR-432* Targets (miRBase)

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGGATGGATG----------
CTGGATGGCTCCTCCATGTCT

hsa-miR-4534 MIMAT0019073 Homo sapiens miR-4534 Targets (miRBase)

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGGATGGATG--------
-GGATGGAGGAGGGGTCT

hsa-miR-3134 MIMAT0015000 Homo sapiens miR-3134 Targets (miRBase)

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGGATGGATG--------------
-TGATGGATAAAAGACTACATATT

hsa-miR-3691-5p MIMAT0018120 Homo sapiens miR-3691-5p Targets (miRBase)

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGATGGATG-----------
AGTGGATGATGGAGACTCGGTAC

hsa-miR-3149 MIMAT0015022 Homo sapiens miR-3149 Targets (miRBase)

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGGATGGATG-----------
TTTGTATGGATATGTGTGTGTAT

hsa-miR-297 MIMAT0004450 Homo sapiens miR-297 Targets (miRBase)

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGATGGATG----------
ATGTATGTGTGCATGTGCATG

hsa-miR-4800-3p MIMAT0019979 Homo sapiens miR-4800-3p Targets (miRBase)

Match Rank:7
Score:0.60
Offset:-9
Orientation:forward strand
Alignment:---------TGGATGGATG
GTGGACAGACGGACGGATG

hsa-miR-1193 MIMAT0015049 Homo sapiens miR-1193 Targets (miRBase)

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGATGGATG-------------
GGGATGGTAGACCGGTGACGTGC

hsa-miR-3171 MIMAT0015046 Homo sapiens miR-3171 Targets (miRBase)

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGGATGGATG---------------
-AGATGTATGGAATCTGTATATATC

hsa-miR-3165 MIMAT0015039 Homo sapiens miR-3165 Targets (miRBase)

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGGATGGATG-------------
-AGGTGGATGCAATGTGACCTCA