Information for 9-TRYKGCWG (Motif 10)


Reverse Opposite:

p-value:1e-28
log p-value:-6.567e+01
Information Content per bp:1.685
Number of Target Sequences with motif860.0
Percentage of Target Sequences with motif8.95%
Number of Background Sequences with motif4690.9
Percentage of Background Sequences with motif5.88%
Average Position of motif in Targets26.2 +/- 17.8bp
Average Position of motif in Background28.8 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-509-5p MIMAT0004779 Homo sapiens miR-509-5p Targets (miRBase)

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TRYKGCWG-------------
TACTGCAGACAGTGGCAATCA

hsa-miR-497 MIMAT0002820 Homo sapiens miR-497 Targets (miRBase)

Match Rank:2
Score:0.65
Offset:-13
Orientation:forward strand
Alignment:-------------TRYKGCWG
ACAAACCACAGTGTGCTGCTG

hsa-miR-509-3-5p MIMAT0004975 Homo sapiens miR-509-3-5p Targets (miRBase)

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TRYKGCWG--------------
TACTGCAGACGTGGCAATCATG

hsa-miR-4291 MIMAT0016922 Homo sapiens miR-4291 Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TRYKGCWG--
AGCTGTTCCTGCTGAA

hsa-miR-449b* MIMAT0009203 Homo sapiens miR-449b* Targets (miRBase)

Match Rank:5
Score:0.65
Offset:-14
Orientation:forward strand
Alignment:--------------TRYKGCWG
AGTGGCAGGGTAGTTGTGGCTG

hsa-miR-4474-3p MIMAT0019001 Homo sapiens miR-4474-3p Targets (miRBase)

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TRYKGCWG-------------
TTGTGGCTGGTCATGAGGCTAA

hsa-miR-424 MIMAT0001341 Homo sapiens miR-424 Targets (miRBase)

Match Rank:7
Score:0.65
Offset:-14
Orientation:forward strand
Alignment:--------------TRYKGCWG
TTCAAAACATGAATTGCTGCTG

hsa-miR-4703-5p MIMAT0019801 Homo sapiens miR-4703-5p Targets (miRBase)

Match Rank:8
Score:0.64
Offset:-15
Orientation:forward strand
Alignment:---------------TRYKGCWG
ACTATATTTGTACTGTATTGCTA

hsa-miR-4530 MIMAT0019069 Homo sapiens miR-4530 Targets (miRBase)

Match Rank:9
Score:0.64
Offset:-8
Orientation:forward strand
Alignment:--------TRYKGCWG--
CGCTCCCGTCCTGCTGGG

hsa-miR-3942-5p MIMAT0018358 Homo sapiens miR-3942-5p Targets (miRBase)

Match Rank:10
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------TRYKGCWG
ATTTCAGGTAACAGTATTGCTT