Information for 7-CTCTATTG (Motif 24)


Reverse Opposite:

p-value:1e-202
log p-value:-4.652e+02
Information Content per bp:1.979
Number of Target Sequences with motif50763.0
Percentage of Target Sequences with motif62.91%
Number of Background Sequences with motif413378.5
Percentage of Background Sequences with motif57.38%
Average Position of motif in Targets146.4 +/- 170.6bp
Average Position of motif in Background137.4 +/- 140.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-936 MIMAT0004979 Homo sapiens miR-936 Targets (miRBase)

Match Rank:1
Score:0.70
Offset:-13
Orientation:forward strand
Alignment:-------------CTCTATTG-
CTGCGATTCCTCCCTCTACTGT

hsa-miR-3121-3p MIMAT0014983 Homo sapiens miR-3121-3p Targets (miRBase)

Match Rank:2
Score:0.70
Offset:-13
Orientation:forward strand
Alignment:-------------CTCTATTG-
TGTCCTTTGCCTACTCTATTTA

hsa-miR-3976 MIMAT0019361 Homo sapiens miR-3976 Targets (miRBase)

Match Rank:3
Score:0.66
Offset:-17
Orientation:forward strand
Alignment:-----------------CTCTATTG
ACATTAATCTTCCTGCTCTCTATA-

hsa-miR-4703-5p MIMAT0019801 Homo sapiens miR-4703-5p Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-12
Orientation:forward strand
Alignment:------------CTCTATTG---
ACTATATTTGTACTGTATTGCTA

hsa-miR-136 MIMAT0000448 Homo sapiens miR-136 Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCTATTG--------------
ACTCCATTTGTTTTGATGATGGA

hsa-miR-4742-3p MIMAT0019873 Homo sapiens miR-4742-3p Targets (miRBase)

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCTATTG--------------
TCTGTATTCTCCTTTGCCTGCAG

hsa-miR-4684-5p MIMAT0019769 Homo sapiens miR-4684-5p Targets (miRBase)

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCTATTG------------
CTCTCTACTGACTTGCAACATA

hsa-miR-3942-5p MIMAT0018358 Homo sapiens miR-3942-5p Targets (miRBase)

Match Rank:8
Score:0.59
Offset:-11
Orientation:forward strand
Alignment:-----------CTCTATTG---
ATTTCAGGTAACAGTATTGCTT

hsa-miR-3675-3p MIMAT0018099 Homo sapiens miR-3675-3p Targets (miRBase)

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTCTATTG-----------
CATCTCTAAGGAACTCCCCCAA

hsa-miR-618 MIMAT0003287 Homo sapiens miR-618 Targets (miRBase)

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCTATTG------------
AAACTCTACTTGTCCTTCTGAGT