Information for 12-CCCCCCC (Motif 25)


Reverse Opposite:

p-value:1e-190
log p-value:-4.388e+02
Information Content per bp:1.560
Number of Target Sequences with motif19539.0
Percentage of Target Sequences with motif24.22%
Number of Background Sequences with motif142157.6
Percentage of Background Sequences with motif19.73%
Average Position of motif in Targets160.3 +/- 172.3bp
Average Position of motif in Background142.1 +/- 141.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.77
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4651 MIMAT0019715 Homo sapiens miR-4651 Targets (miRBase)

Match Rank:1
Score:0.72
Offset:-12
Orientation:forward strand
Alignment:------------CCCCCCC-
GCCCGACCTCACCCACCCCG

hsa-miR-3196 MIMAT0015080 Homo sapiens miR-3196 Targets (miRBase)

Match Rank:2
Score:0.71
Offset:-10
Orientation:forward strand
Alignment:----------CCCCCCC-
GAGGCCCCTGCCGCCCCG

hsa-miR-4488 MIMAT0019022 Homo sapiens miR-4488 Targets (miRBase)

Match Rank:3
Score:0.71
Offset:-10
Orientation:forward strand
Alignment:----------CCCCCCC-
CGCCGGAGCCCGCCCCCT

hsa-miR-149* MIMAT0004609 Homo sapiens miR-149* Targets (miRBase)

Match Rank:4
Score:0.71
Offset:-13
Orientation:forward strand
Alignment:-------------CCCCCCC-
GCACAGCCCCCGTCCCTCCCT

hsa-miR-3180 MIMAT0018178 Homo sapiens miR-3180 Targets (miRBase)

Match Rank:5
Score:0.71
Offset:-11
Orientation:forward strand
Alignment:-----------CCCCCCC-
CTCCGGAAGCTCCGCCCCA

hsa-miR-1908 MIMAT0007881 Homo sapiens miR-1908 Targets (miRBase)

Match Rank:6
Score:0.70
Offset:-13
Orientation:forward strand
Alignment:-------------CCCCCCC-
GACCAATCGCCGTCCCCGCCG

hsa-miR-4723-5p MIMAT0019838 Homo sapiens miR-4723-5p Targets (miRBase)

Match Rank:7
Score:0.70
Offset:-16
Orientation:forward strand
Alignment:----------------CCCCCCC-
TGCTCTTATCTCATGGCTCCCCCA

hsa-miR-4728-5p MIMAT0019849 Homo sapiens miR-4728-5p Targets (miRBase)

Match Rank:8
Score:0.70
Offset:-15
Orientation:forward strand
Alignment:---------------CCCCCCC-
TGCTTGCTGCCTCTCCCCTCCCA

hsa-miR-663 MIMAT0003326 Homo sapiens miR-663 Targets (miRBase)

Match Rank:9
Score:0.69
Offset:-14
Orientation:forward strand
Alignment:--------------CCCCCCC-
GCGGTCCCGCGGCGCCCCGCCT

hsa-miR-92a-2* MIMAT0004508 Homo sapiens miR-92a-2* Targets (miRBase)

Match Rank:10
Score:0.69
Offset:-14
Orientation:forward strand
Alignment:--------------CCCCCCC-
GTAATGCAACAAATCCCCACCC