Information for 5-CCCCCC (Motif 14)


Reverse Opposite:

p-value:1e-172
log p-value:-3.976e+02
Information Content per bp:1.806
Number of Target Sequences with motif10131.0
Percentage of Target Sequences with motif3.54%
Number of Background Sequences with motif67186.7
Percentage of Background Sequences with motif2.60%
Average Position of motif in Targets19.8 +/- 10.0bp
Average Position of motif in Background20.9 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4472 MIMAT0018999 Homo sapiens miR-4472 Targets (miRBase)

Match Rank:1
Score:0.73
Offset:-9
Orientation:forward strand
Alignment:---------CCCCCC---
AAAACAACACCCCCCACC

hsa-miR-1321 MIMAT0005952 Homo sapiens miR-1321 Targets (miRBase)

Match Rank:2
Score:0.72
Offset:-10
Orientation:forward strand
Alignment:----------CCCCCC--
ATCACATTCACCTCCCTG

hsa-miR-4525 MIMAT0019064 Homo sapiens miR-4525 Targets (miRBase)

Match Rank:3
Score:0.71
Offset:-15
Orientation:forward strand
Alignment:---------------CCCCCC
AACCAGCATGCACATCCCCCC

hsa-miR-3679-3p MIMAT0018105 Homo sapiens miR-3679-3p Targets (miRBase)

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCCCCC-------------
CTTCCCCCCAGTAATCTTCATC

hsa-miR-149* MIMAT0004609 Homo sapiens miR-149* Targets (miRBase)

Match Rank:5
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------CCCCCC-
GCACAGCCCCCGTCCCTCCCT

hsa-miR-3689c MIMAT0019007 Homo sapiens miR-3689c Targets (miRBase)

Match Rank:6
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------CCCCCC--
ACCACAATATCACACCTCCCAG

hsa-miR-3689b* MIMAT0018181 Homo sapiens miR-3689b* Targets (miRBase)

Match Rank:7
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------CCCCCC--
ACCACAATATCACACCTCCCAG

hsa-miR-3689a-3p MIMAT0018118 Homo sapiens miR-3689a-3p Targets (miRBase)

Match Rank:8
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------CCCCCC--
ACCACGATATCACACCTCCCAG

hsa-miR-30b* MIMAT0004589 Homo sapiens miR-30b* Targets (miRBase)

Match Rank:9
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------CCCCCC--
GAAGTAAACATCCACCTCCCAG

hsa-miR-4756-5p MIMAT0019899 Homo sapiens miR-4756-5p Targets (miRBase)

Match Rank:10
Score:0.69
Offset:-15
Orientation:forward strand
Alignment:---------------CCCCCC--
AGCAGAGAGTGAGCGCCTCCCTG