Information for 4-ARMAGHGRG (Motif 8)


Reverse Opposite:

p-value:1e-421
log p-value:-9.694e+02
Information Content per bp:1.642
Number of Target Sequences with motif49292.0
Percentage of Target Sequences with motif61.09%
Number of Background Sequences with motif381826.9
Percentage of Background Sequences with motif53.00%
Average Position of motif in Targets165.5 +/- 155.3bp
Average Position of motif in Background130.6 +/- 161.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.69
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-503 MIMAT0002874 Homo sapiens miR-503 Targets (miRBase)

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ARMAGHGRG-------------
TAGCAGCGGGAACAGTTCTGCAG

hsa-miR-4286 MIMAT0016916 Homo sapiens miR-4286 Targets (miRBase)

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ARMAGHGRG--
GGTACCAGGAGTGGGGT

hsa-miR-4519 MIMAT0019056 Homo sapiens miR-4519 Targets (miRBase)

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ARMAGHGRG--------
CAGCAGTGCGCAGGGCTG

hsa-miR-1178 MIMAT0005823 Homo sapiens miR-1178 Targets (miRBase)

Match Rank:4
Score:0.58
Offset:-9
Orientation:forward strand
Alignment:---------ARMAGHGRG---
CTAGGGAAGAACAGTGAGCAA

hsa-miR-720 MIMAT0005954 Homo sapiens miR-720 Targets (miRBase)

Match Rank:5
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------ARMAGHGRG-
TGGAGGCCCCAGCGAGA

hsa-miR-4441 MIMAT0018959 Homo sapiens miR-4441 Targets (miRBase)

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ARMAGHGRG---------
-ACAGGGAGGAGATTGTA

hsa-miR-1208 MIMAT0005873 Homo sapiens miR-1208 Targets (miRBase)

Match Rank:7
Score:0.58
Offset:-12
Orientation:forward strand
Alignment:------------ARMAGHGRG
TCCGCCTGTCTGAACAGTGA-

hsa-miR-4640-3p MIMAT0019700 Homo sapiens miR-4640-3p Targets (miRBase)

Match Rank:8
Score:0.58
Offset:-11
Orientation:forward strand
Alignment:-----------ARMAGHGRG--
GTGGGCCAGGAAACAGGGGGTG

hsa-miR-1280 MIMAT0005946 Homo sapiens miR-1280 Targets (miRBase)

Match Rank:9
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------ARMAGHGRG-
GGGTGGCAGCGGTGGGA

hsa-miR-4484 MIMAT0019018 Homo sapiens miR-4484 Targets (miRBase)

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ARMAGHGRG----------
AAAAGGCGGGAGAAGCCCCA