Information for 5-TTTCCTKY (Motif 8)


Reverse Opposite:

p-value:1e-31
log p-value:-7.357e+01
Information Content per bp:1.528
Number of Target Sequences with motif1567.0
Percentage of Target Sequences with motif16.30%
Number of Background Sequences with motif9519.9
Percentage of Background Sequences with motif11.93%
Average Position of motif in Targets23.6 +/- 15.3bp
Average Position of motif in Background30.0 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4496 MIMAT0019031 Homo sapiens miR-4496 Targets (miRBase)

Match Rank:1
Score:0.72
Offset:-15
Orientation:forward strand
Alignment:---------------TTTCCTKY
CCCTCTCAGCTTCAGTTTCCTC-

hsa-miR-1252 MIMAT0005944 Homo sapiens miR-1252 Targets (miRBase)

Match Rank:2
Score:0.71
Offset:-13
Orientation:forward strand
Alignment:-------------TTTCCTKY-
TAAATGAATTCAATTTCCTTCT

hsa-miR-3124-3p MIMAT0019200 Homo sapiens miR-3124-3p Targets (miRBase)

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTTCCTKY------------
ACTTTCCTCACTCCCGTGAAGT

hsa-miR-4261 MIMAT0016890 Homo sapiens miR-4261 Targets (miRBase)

Match Rank:4
Score:0.69
Offset:-10
Orientation:forward strand
Alignment:----------TTTCCTKY
TGGGTCCCTGTTTCCT--

hsa-miR-4279 MIMAT0016909 Homo sapiens miR-4279 Targets (miRBase)

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTCCTKY-------
CTCTCCTCCCGGCTTC

hsa-miR-4755-5p MIMAT0019895 Homo sapiens miR-4755-5p Targets (miRBase)

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTCCTKY-------------
TTTCCCTTCAGAGCCTGGCTTT

hsa-miR-3685 MIMAT0018113 Homo sapiens miR-3685 Targets (miRBase)

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTCCTKY--------------
TTTCCTACCCTACCTGAAGACT

hsa-miR-4428 MIMAT0018943 Homo sapiens miR-4428 Targets (miRBase)

Match Rank:8
Score:0.66
Offset:-14
Orientation:forward strand
Alignment:--------------TTTCCTKY
GCTCCATGTTCCCGTCTCCTTG

hsa-miR-4436a MIMAT0018952 Homo sapiens miR-4436a Targets (miRBase)

Match Rank:9
Score:0.65
Offset:-13
Orientation:forward strand
Alignment:-------------TTTCCTKY
ATCCACTTCTGCCTGTCCTGC

hsa-miR-4423-5p MIMAT0019232 Homo sapiens miR-4423-5p Targets (miRBase)

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTCCTKY------------
AGTTGCCTTTTTGTTCCCATGC